RPSBLAST alignment of GI: 254780406 and protein with PDBid: 2gml

>2gml_A Ribosomal large subunit pseudouridine synthase F; RLUF, ribosome, RNA modifying enzyme, isomerase; 2.60A {Escherichia coli} Length = 237

 Score =  125 bits (316), Expect = 1e-29
 Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 19/235 (8%)

Query: 77  LYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARVLEL 136
             +KP+G+V+T  D + R  + D +     RV  +GRLD +++GL+ LTN G L   +  
Sbjct: 18  ALNKPVGIVSTTEDGE-RDNIVDFVNH-SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILR 75

Query: 137 PSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGLREG 196
                 + Y V     + ++ +  +  G+ I     G +      +K +     + L +G
Sbjct: 76  AGNDHEKEYLVTVDKPITEEFIRGMSAGVPI----LGTVTKKCKVKKEAPFVFRITLVQG 131

Query: 197 KNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSKKILREQLGPHLLEEAQVN 256
            NR+I+++ E F ++V +L R       L  +  G  R+++   L +     L+E +   
Sbjct: 132 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFK--LIENS--- 186

Query: 257 LDAPIYSSETLVRDRPNIISEVPDDFTRMKKNSSQKNG--LSKQKKLATPVHRRN 309
                 SSE   + +    +          + +++K G   S  K+  +P  ++ 
Sbjct: 187 ------SSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 235