HHsearch alignment for GI: 254780408 and conserved domain: COG5508
>COG5508 Uncharacterized conserved small protein [Function unknown].
Probab=99.88 E-value=2.8e-23 Score=142.51 Aligned_cols=59 Identities=51% Similarity=0.861 Sum_probs=52.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHCCCHHCCCCCCCCCCCCCCHHCCCEECCC
Q ss_conf 5575445899999999999997412-2122106510188889986433610007865149
Q gi|254780408|r 17 IKTSHDPLSSIAKRALEEAKQRKSA-NNKDAKLPIEIGGRKGLDPTRFGDWEKNGISIDF 75 (75)
Q Consensus 17 ~~~~~~~ls~aA~rAL~Ea~~rr~~-~~~~~~~pkE~gG~~G~ePtRyGDWE~kG~~~DF 75 (75)
T Consensus 25 ~~~~~~~ltpAa~ralkea~arraa~ee~~~s~pkEiGGrgGlePtRyGDWe~KGr~iDF 84 (84)
T COG5508 25 DARPSFDLTPAAQRALKEAEARRAASEEKNLSLPKEIGGRGGLEPTRYGDWEHKGRVIDF 84 (84)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 543255788378999999999887776641365065578788886544643006634579