HHsearch alignment for GI: 254780410 and conserved domain: PRK13942
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional.
Probab=95.61 E-value=0.17 Score=30.30 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHCC-----------CCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 489999999998189-----------8049999998710898786468-9888888886457671179999999999999
Q gi|254780410|r 3 NKLIRKIVNLIKKNG-----------QMTVDQYFALCVADPEFGYYST-CNPFGAVGDFVTAPEISQIFGEMLAIFLICA 70 (362)
Q Consensus 3 ~~L~~~i~~~I~~~G-----------~i~f~~fM~~aLy~p~~GYY~~-~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~ 70 (362)
T Consensus 4 ~~~~~MVd~l~r~~~I~d~~Vl~A~~~VpRe~Fvp~~~~~---~AY~D~~lpig~-g~tis~P~~~a-----------~m 68 (214)
T PRK13942 4 NEIEKVIKNLIRRGYIKKKKVIDALLSVPRHKFVPEYLEE---YAYVDTPLEIGY-GQTISAIHMVA-----------IM 68 (214)
T ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCHHHHH---CCCCCCCCCCCC-CCEECHHHHHH-----------HH
T ss_conf 3799999999972999999999999839987869955765---010589867899-97887499999-----------99
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf 998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r 71 WEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY 133 (362)
Q Consensus 71 ~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~ 133 (362)
T Consensus 69 l~~L~l~~~~~VLeIGtGsGY~tAlla~lvg-------~~g~V~siE~~~~l~~~A~~~l~~~ 124 (214)
T PRK13942 69 CELLDLDEGQKVLEIGTGSGYHAAVVAEIVG-------KSGKVTTIERIPELAEKAKKNLKKL 124 (214)
T ss_pred HHHHCCCCCCEEEEECCCCCHHHHHHHHHHC-------CCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 9972799999799967995299999999747-------6785799971799999999999863