HHsearch alignment for GI: 254780410 and conserved domain: PRK13944
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional.
Probab=94.64 E-value=0.15 Score=30.56 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHCCCCCCCCCCC-CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 0499999987108987864689-888888886457671179999999999999998388876214100786468988879
Q gi|254780410|r 19 MTVDQYFALCVADPEFGYYSTC-NPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDIL 97 (362)
Q Consensus 19 i~f~~fM~~aLy~p~~GYY~~~-~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL 97 (362)
T Consensus 27 VpRe~Fvp~~~~~---~AY~D~~lpi~~-~~tis~P~~~a-----------~ml~~L~~~~~~~VLeIGtGsGY~tAlla 91 (205)
T PRK13944 27 VPREEFVMPEYRM---MAYEDRPLPLFA-GATISAPHMVA-----------MMCELIEPRPGMKILEVGTGSGYQAAVCA 91 (205)
T ss_pred CCHHHCCCHHHHC---CCCCCCCEECCC-CCEECHHHHHH-----------HHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 9987869946871---873699751489-98997799999-----------99997068999989997898519999999
Q ss_pred HHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf 999741856430121023636978999998641110
Q gi|254780410|r 98 RVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY 133 (362)
Q Consensus 98 ~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~ 133 (362)
T Consensus 92 ~l~~-------~~g~V~siE~~~~L~~~A~~~l~~l 120 (205)
T PRK13944 92 EAIE-------RRGKVYTVEIVKELAIYAAQNIERL 120 (205)
T ss_pred HHHC-------CCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 9837-------4771799953699999999999985