HHsearch alignment for GI: 254780410 and conserved domain: pfam05219
>pfam05219 DREV DREV methyltransferase. This family contains DREV protein homologues from several eukaryotes. The function of this protein is unknown. However, these proteins appear to be related to other methyltransferases (Bateman A pers obs).
Probab=91.93 E-value=0.58 Score=26.63 Aligned_cols=194 Identities=18% Similarity=0.172 Sum_probs=92.4
Q ss_pred HHHHHHHHHCCCCCCCCCCC---CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 99999987108987864689---888888886457671179999999999999998388876214100786468988879
Q gi|254780410|r 21 VDQYFALCVADPEFGYYSTC---NPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDIL 97 (362)
Q Consensus 21 f~~fM~~aLy~p~~GYY~~~---~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL 97 (362)
T Consensus 44 ~hsl~~~~L~~----fms~TdiNG~LgRGsMfV~S~~Q---~~~LL~~~~-~~~~--~~~~~~~LLDlGAGdG~VT~~la 113 (265)
T pfam05219 44 WHALARSILSF----FMSQTDINGFLGRGSMFIFSEEQ---FRKLLVIGG-FQPA--SGQEPVTLLDLGAGDGEITLRMA 113 (265)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHCCCCEEEECHHH---HHHHHHCCC-CCCC--CCCCCCEEEEECCCCCHHHHHHH
T ss_conf 99999999998----96242166564577658844999---999972437-6788--88776647883589978999999
Q ss_pred HHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEE
Q ss_conf 99974185643012102363697899999864111023101104344445695699981228875235899915664689
Q gi|254780410|r 98 RVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRER 177 (362)
Q Consensus 98 ~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~ 177 (362)
T Consensus 114 ~~F----------~~V~aTE~S~~Mr~rL~~r-------------------gf~vl~~~~----------------~~~~ 148 (265)
T pfam05219 114 PTF----------EEVYATELSWTMRDRLKKK-------------------NYNVLTEIE----------------WQET 148 (265)
T ss_pred HHH----------CEEEEEECCHHHHHHHHHC-------------------CCEEEEEHH----------------CCCC
T ss_conf 752----------3588872789999999975-------------------986875012----------------0356
Q ss_pred EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECC
Q ss_conf 98996079535225764343223463316568411279347899999999762057059996243368588880776405
Q gi|254780410|r 178 MIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACDGGTAIVIDYGYLQSRVGDTLQAVKG 257 (362)
Q Consensus 178 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L~iDYGy~~~r~~gTLr~y~~ 257 (362)
T Consensus 149 ~~~f--------D---------vIscLNvL--DR---c~~P~~LL~~i~~~L~P~G~lilAvVlPf~pyVE~~~~---~~ 203 (265)
T pfam05219 149 DVNL--------D---------LILCLNLL--DR---CFDPFKLLEDIHLALAPNGRVIVALVLPYMHYVETNTG---SH 203 (265)
T ss_pred CCCE--------E---------EEHHHHHH--HC---CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCC---CC
T ss_conf 8744--------5---------54222445--31---38869999999972499967999998256201775898---77
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEE
Q ss_conf 7676700010003453126889999999968983633233
Q gi|254780410|r 258 HTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTT 297 (362)
Q Consensus 258 H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~s 297 (362)
T Consensus 204 ~~p~e~l~~~g---~~~E~~v~~l~~vl~p~GF~v~~~tR 240 (265)
T pfam05219 204 LPPRPLLENNG---ASFEEEVARFMEVFENAGFRVEAWTR 240 (265)
T ss_pred CCCHHHCCCCC---CCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99521137899---80999999999987607957888732