HHsearch results for GI: 254780410 and protein with PDBid: 1dus_A
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.79 E-value=0.027 Score=34.24 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=46.7
Q ss_pred CCCCCEEECCCCCHHHHH----HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf 888886457671179999----9999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r 44 GAVGDFVTAPEISQIFGE----MLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS 119 (362)
Q Consensus 44 G~~GDF~Tsp~is~~Fg~----~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s 119 (362)
|+.-.|.|.|-+ ||. .-++.+++ .+..+..-.|+|+|+|+|.++..+.+ .. -+++.+|.|
T Consensus 20 g~~~~~~~~~gv---f~~~~~d~~t~~Ll~---~l~~~~~~~vLDiGcG~G~~~~~la~----~~------~~v~~iDis 83 (194)
T 1dus_A 20 GKKLKFKTDSGV---FSYGKVDKGTKILVE---NVVVDKDDDILDLGCGYGVIGIALAD----EV------KSTTMADIN 83 (194)
T ss_dssp TEEEEEEEETTS---TTTTSCCHHHHHHHH---HCCCCTTCEEEEETCTTSHHHHHHGG----GS------SEEEEEESC
T ss_pred CEEEEEECCCCC---CCCCCCCHHHHHHHH---HCCCCCCCEEEEECCCCCHHHHHHHH----HC------CEEEEEECC
T ss_conf 907999748987---689986999999998---28988999499956964299999997----38------847998263
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 78999998641110
Q gi|254780410|r 120 ERLTLIQKKQLASY 133 (362)
Q Consensus 120 ~~l~~~Q~~~l~~~ 133 (362)
+...+.-+++....
T Consensus 84 ~~~i~~a~~n~~~~ 97 (194)
T 1dus_A 84 RRAIKLAKENIKLN 97 (194)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
T ss_conf 67889999999981