HHsearch results for GI: 254780410 and protein with PDBid: 1zkd_A

>1zkd_A DUF185; X-RAY, NESG, RPR58, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.10A {Rhodopseudomonas palustris CGA009} SCOP: c.66.1.52
Probab=100.00  E-value=0  Score=723.98  Aligned_cols=352  Identities=41%  Similarity=0.668  Sum_probs=316.2

Q ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             84899999999981898049999998710898786468988888888645767117999999999999999838887621
Q gi|254780410|r    2 ENKLIRKIVNLIKKNGQMTVDQYFALCVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVR   81 (362)
Q Consensus         2 ~~~L~~~i~~~I~~~G~i~f~~fM~~aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~   81 (362)
                      .++|.++|+++|+++|||||++||++|||||++|||+++++||++||||||||+||+||++||+|+.++|+.++.|++++
T Consensus         4 ~t~L~~~i~~~I~~~GpIsf~~fM~~aLy~p~~GYY~~~~~iG~~GDF~TSpeis~~FG~~ia~~~~~~~~~~~~p~~~~   83 (387)
T 1zkd_A            4 QTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQTLR   83 (387)
T ss_dssp             SSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEE
T ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             41799999999995699579999999718998634478998889987468740579999999999999999759997716


Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCC
Q ss_conf             41007864689888799997418564301210236369789999986411102310110434444569569998122887
Q gi|254780410|r   82 LVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANEFFDS  161 (362)
Q Consensus        82 ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDA  161 (362)
                      |||+|||+|+||+||++.++ ..|.++..++|++||+|+.|++.|+++|+.. .++.|+++++++|..++||+|||||||
T Consensus        84 ivE~GaG~G~L~~DIl~~~~-~~p~~~~~~~~~~vE~s~~Lr~~Q~~~L~~~-~~i~~~~~l~~~~~~~giiiANE~fDA  161 (387)
T 1zkd_A           84 LIEIGPGRGTMMADALRALR-VLPILYQSLSVHLVEINPVLRQKQQTLLAGI-RNIHWHDSFEDVPEGPAVILANEYFDV  161 (387)
T ss_dssp             EEEECCTTSHHHHHHHHHHT-TSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-SSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred             EEEECCCCCHHHHHHHHHHH-HCHHHHHCCEEEEEECCHHHHHHHHHHHCCC-CCEEEECCHHHCCCCCCEEEECCCCCC
T ss_conf             99967982078998999986-4815441345899936878889999872477-740474142117788814761223566


Q ss_pred             CCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCC---C-CCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEE
Q ss_conf             5235899915664689989960795352257643432234---6-33165684112793478999999997620570599
Q gi|254780410|r  162 LPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFL---T-CSDYFLGAIFENSPCRDREMQSISDRLACDGGTAI  237 (362)
Q Consensus       162 lPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L  237 (362)
                      ||||||++++++|+|++|++++++++.|...+.+.+....   . ....++|++.|+++....|.......+  ++|++|
T Consensus       162 lPv~~f~~~~~~w~E~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~--~~G~~L  239 (387)
T 1zkd_A          162 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRD--QGGAAL  239 (387)
T ss_dssp             SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHH--HCEEEE
T ss_pred             CCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHH--CCCCEE
T ss_conf             650479984883378753216521045402568645578763244014888847860658999998899986--488678


Q ss_pred             EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEHHHHHHHCCHHHHHHHHHHC
Q ss_conf             96243368588880776405767670001000345312688999999996898363323389999978979999998708
Q gi|254780410|r  238 VIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTTQGKFLEGLGIWQRAFSLMKQ  317 (362)
Q Consensus       238 ~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~sQ~~FL~~~GI~~r~~~l~~~  317 (362)
                      +|||||...+.++|+|+|++|+++|||.+||+|||||||||++|+++++++|+++.|++||++||+++||.+|++.+.++
T Consensus       240 ~IDYG~~~~~~g~~l~~~~~h~~~d~l~~pG~~DITahVdFs~L~~~~~~~g~~~~g~~tQ~~FL~~~GI~er~~~l~~~  319 (387)
T 1zkd_A          240 IIDYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAK  319 (387)
T ss_dssp             EEEEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHT
T ss_pred             EECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCC
T ss_conf             60332246765672556642545666468995626677498999999997799870645799999978999999999756


Q ss_pred             CCCHH--HHHHHHHHHHHCCCCHH--HCCCEEEEEEEECCCCC-CCCCC
Q ss_conf             46279--99999999861468822--31632699998078888-99888
Q gi|254780410|r  318 TARKD--ILLDSVKRLVSTSADKK--SMGELFKILVVSHEKVE-LMPFV  361 (362)
Q Consensus       318 ~~~~~--~~~~~~~rli~~l~~p~--~MGe~FKVl~~sk~~~~-~~~f~  361 (362)
                      .+...  .+..+++||+    +|+  +|||+||||++|+++.+ +++|-
T Consensus       320 ~~~~~~~~l~~~~krLi----~p~~~~MGe~FKVL~is~~~~~~~~~~~  364 (387)
T 1zkd_A          320 ATPQVSEDIAGALQRLT----GEGRGAMGSMFKVIGVSDPKIETLVALS  364 (387)
T ss_dssp             SCHHHHHHHHHHHHHHH----CEETTEETTTEEEEEEECTTCCCCTTTT
T ss_pred             CCHHHHHHHHHHHHHCC----CCCCCHHHHHEEEEEECCCCCCCCCCCC
T ss_conf             99899999999998625----9882101154789998279998777889