HHsearch results for GI: 254780410 and protein with PDBid: 1zq9_A
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.97 E-value=0.0037 Score=40.14 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=47.7
Q ss_pred CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHH
Q ss_conf 88888864576711799999999999999983888762141007864689888799997418564301210236369789
Q gi|254780410|r 43 FGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERL 122 (362)
Q Consensus 43 ~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l 122 (362)
+|. .|.+.+.+ +..++ ...+..+.-.|+|+|||.|.|...+++. ..+++.||+.+.+
T Consensus 6 LGQ--nFL~d~~i--------~~~Iv---~~~~~~~~d~VlEIGPG~G~LT~~Ll~~----------~~~v~aiE~D~~l 62 (285)
T 1zq9_A 6 IGQ--HILKNPLI--------INSII---DKAALRPTDVVLEVGPGTGNMTVKLLEK----------AKKVVACELDPRL 62 (285)
T ss_dssp --C--CEECCHHH--------HHHHH---HHTCCCTTCEEEEECCTTSTTHHHHHHH----------SSEEEEEESCHHH
T ss_pred CCC--CCCCCHHH--------HHHHH---HHHCCCCCCEEEEECCCCHHHHHHHHHC----------CCCEEEEEECHHH
T ss_conf 684--60779899--------99999---9708999997999689721999999804----------9966999987899
Q ss_pred HHHHHHHHHHC
Q ss_conf 99998641110
Q gi|254780410|r 123 TLIQKKQLASY 133 (362)
Q Consensus 123 ~~~Q~~~l~~~ 133 (362)
.+.-++++...
T Consensus 63 ~~~L~~~~~~~ 73 (285)
T 1zq9_A 63 VAELHKRVQGT 73 (285)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHCC
T ss_conf 99999876201