HHsearch results for GI: 254780410 and protein with PDBid: 2ih2_A
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.73 E-value=0.076 Score=31.21 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=41.7
Q ss_pred CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHH
Q ss_conf 888645767117999999999999999838887621410078646898887999974185643012102363697899
Q gi|254780410|r 46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLT 123 (362)
Q Consensus 46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~ 123 (362)
-|-|||.++|..+. ++. +..++...|+|.++|+|.|...+++.+.. ..+++-+|+++...
T Consensus 18 ~G~~yTP~~i~~~~--------~~~---l~~~~~~~IlDPacGsG~FL~~~~~~~~~-------~~~i~G~did~~~~ 77 (421)
T 2ih2_A 18 LGRVETPPEVVDFM--------VSL---AEAPRGGRVLEPACAHGPFLRAFREAHGT-------AYRFVGVEIDPKAL 77 (421)
T ss_dssp ---CCCCHHHHHHH--------HHH---CCCCTTCEEEEETCTTCHHHHHHHHHHCS-------CSEEEEEESCTTTC
T ss_pred CCEECCCHHHHHHH--------HHH---CCCCCCCEEEECCCCHHHHHHHHHHHCCC-------CCEEEEEECCHHHH
T ss_conf 98788919999999--------994---78999699996877646999999986776-------78699997989999