HHsearch results for GI: 254780410 and protein with PDBid: 2okc_A

>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=93.91  E-value=0.23  Score=27.87  Aligned_cols=78  Identities=10%  Similarity=0.079  Sum_probs=53.6

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH-----HHCCCEEEEECC
Q ss_conf             888864576711799999999999999983888762141007864689888799997418564-----301210236369
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDF-----FSVLSIYMVETS  119 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~-----~~~l~~~ivE~s  119 (362)
                      ..|-|+|-++|..+.        +++.   .......|++..+|+|.|...+.+.+.......     ....+++-+|.+
T Consensus       149 ~~GqffTP~~Iv~~m--------v~ll---~~~~~~~IlDPacGsG~fL~~~~~~~~~~~~~~~~~~~~~~~~i~G~e~~  217 (445)
T 2okc_A          149 GAGQYFTPRPLIQAM--------VDCI---NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT  217 (445)
T ss_dssp             CCGGGCCCHHHHHHH--------HHHH---CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred             CCCEECCCHHHHHHH--------HHHC---CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEECEECC
T ss_conf             380465989999999--------9760---79999978127889766599999999873122777755301014234120


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             78999998641110
Q gi|254780410|r  120 ERLTLIQKKQLASY  133 (362)
Q Consensus       120 ~~l~~~Q~~~l~~~  133 (362)
                      +......+.++.-+
T Consensus       218 ~~~~~la~~nl~l~  231 (445)
T 2okc_A          218 PLVVTLASMNLYLH  231 (445)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCC
T ss_conf             99999999623102