HHsearch results for GI: 254780410 and protein with PDBid: 3dh0_A
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.59 E-value=0.0071 Score=38.25 Aligned_cols=150 Identities=9% Similarity=0.147 Sum_probs=78.9
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHCCCCHHHCCCC
Q ss_conf 9983888762141007864689888799997418564301210236369789999986411102-310110434444569
Q gi|254780410|r 71 WEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINWYTSLADVPLG 149 (362)
Q Consensus 71 ~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w~~~l~~~~~~ 149 (362)
+..++....-.|+|+|+|+|.++..+.+.+. | ..+++-+|.|+.+.+.-++++.... .++.++
T Consensus 30 l~~~~l~~g~~VLDiGcG~G~~~~~la~~~~---~----~~~v~giD~s~~~i~~a~~~~~~~~~~~v~~~--------- 93 (219)
T 3dh0_A 30 LKEFGLKEGMTVLDVGTGAGFYLPYLSKMVG---E----KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVL--------- 93 (219)
T ss_dssp HHHHTCCTTCEEEESSCTTCTTHHHHHHHHT---T----TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEE---------
T ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHHHHCC---C----CEEEEEEEEHHHHHHHHHHHHHHHHCCEEHHH---------
T ss_conf 9865989939999987888877999997508---9----83999985003778899997676402210010---------
Q ss_pred CEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 56999812288752358999156646899899607953522576434322346331656841127934789999999976
Q gi|254780410|r 150 FTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRL 229 (362)
Q Consensus 150 ~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l 229 (362)
.++ .+.+|+. ++.+-..+.. . .++.-+.....++.+.+.|
T Consensus 94 ----~~d--~~~lp~~------~~sfD~V~~~---~-------------------------~l~~~~d~~~~l~ei~rvL 133 (219)
T 3dh0_A 94 ----KSE--ENKIPLP------DNTVDFIFMA---F-------------------------TFHELSEPLKFLEELKRVA 133 (219)
T ss_dssp ----ECB--TTBCSSC------SSCEEEEEEE---S-------------------------CGGGCSSHHHHHHHHHHHE
T ss_pred ----HHH--HHCCCCC------CCCEEEHHHC---C-------------------------HHHHCCCHHHHHHHHHHHC
T ss_conf ----003--3327755------5542135731---4-------------------------0420779999999999986
Q ss_pred HHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEE
Q ss_conf 20570599962433685888807764057676700010003453126889999999968983633233
Q gi|254780410|r 230 ACDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTT 297 (362)
Q Consensus 230 ~~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~s 297 (362)
+ .+|.++++||...... .+ .+. ....+-..+....+++|++......
T Consensus 134 k-pgG~l~i~d~~~~~~~-~~-----------~~~--------~~~~~~~~~~~~l~~aGf~~~~~~~ 180 (219)
T 3dh0_A 134 K-PFAYLAIIDWKKEERD-KG-----------PPP--------EEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp E-EEEEEEEEEECSSCCS-SS-----------CCG--------GGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred C-CCEEEEEEECCCCCCC-CC-----------CCH--------HHCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf 8-3818999988865466-69-----------875--------7658999999999986996988888