HHsearch results for GI: 254780410 and protein with PDBid: 3fut_A
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus HB8} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.33 E-value=0.001 Score=44.04 Aligned_cols=86 Identities=20% Similarity=0.342 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 80499999987108987864689888888886457671179999999999999998388876214100786468988879
Q gi|254780410|r 18 QMTVDQYFALCVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDIL 97 (362)
Q Consensus 18 ~i~f~~fM~~aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL 97 (362)
|-+..++|+. +|.+.++ .+|. .|..++.+-. .+++. .+ +.+-.|+|+|||.|.|...++
T Consensus 7 p~~~r~~l~~------~~~~~kK-~lGQ--nFL~d~~i~~--------~iv~~---~~-~~~~~VlEIGpG~G~LT~~L~ 65 (271)
T 3fut_A 7 PQSVRALLER------HGLFADK-RFGQ--NFLVSEAHLR--------RIVEA---AR-PFTGPVFEVGPGLGALTRALL 65 (271)
T ss_dssp HHHHHHHHHH------TTCCCST-TSSC--CEECCHHHHH--------HHHHH---HC-CCCSCEEEECCTTSHHHHHHH
T ss_pred HHHHHHHHHH------CCCCCCC-CCCC--CCCCCHHHHH--------HHHHH---HC-CCCCCEEEECCCCCHHHHHHH
T ss_conf 7999999997------6999887-7784--5038989999--------99996---58-999988996797719999999
Q ss_pred HHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 9997418564301210236369789999986411102
Q gi|254780410|r 98 RVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG 134 (362)
Q Consensus 98 ~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~ 134 (362)
+. ...++.||+-+.+....++++....
T Consensus 66 ~~----------~~~v~avE~D~~l~~~L~~~~~~~~ 92 (271)
T 3fut_A 66 EA----------GAEVTAIEKDLRLRPVLEETLSGLP 92 (271)
T ss_dssp HT----------TCCEEEEESCGGGHHHHHHHTTTSS
T ss_pred HC----------CCCEEEEEECHHHHHHHHHHHHHCC
T ss_conf 60----------8967999837067888875433301