HHsearch results for GI: 254780410 and protein with PDBid: 3lpm_A
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.12 E-value=0.12 Score=29.87 Aligned_cols=71 Identities=24% Similarity=0.292 Sum_probs=46.2
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC--CCCHHCCC-CHHHCC----C-C
Q ss_conf 76214100786468988879999741856430121023636978999998641110--23101104-344445----6-9
Q gi|254780410|r 78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY--GDKINWYT-SLADVP----L-G 149 (362)
Q Consensus 78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~--~~~v~w~~-~l~~~~----~-~ 149 (362)
++..|+|+|+|+|.++.-+. +. + ..+++.||.++...+.-++++... .++|.++. ++.+++ . .
T Consensus 49 ~~~~vLDlG~G~G~~~l~la----~~-~----~~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS----TR-T----KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH----TT-C----CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred CCCEEEEEECCCCHHHHHHH----HC-C----CCEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCCC
T ss_conf 79979997258589999998----67-8----988999999899999999999860733011233001110001035542
Q ss_pred CEEEEEEC
Q ss_conf 56999812
Q gi|254780410|r 150 FTFLVANE 157 (362)
Q Consensus 150 ~~iiiaNE 157 (362)
+.+|++|-
T Consensus 120 fD~Iv~NP 127 (259)
T 3lpm_A 120 ADIVTCNP 127 (259)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
T ss_conf 54788578