HHsearch results for GI: 254780410 and protein with PDBid: 3ofk_A
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.52 E-value=0.064 Score=31.71 Aligned_cols=80 Identities=14% Similarity=0.181 Sum_probs=46.4
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHC-CC-
Q ss_conf 983888762141007864689888799997418564301210236369789999986411102310110-434444-56-
Q gi|254780410|r 72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADV-PL- 148 (362)
Q Consensus 72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~-~~- 148 (362)
..+..+..-.|+|+|+|+|.++..+.+ . ..+++-+|.|+.+.+.-+++.... ..+.|. .++.+. +.
T Consensus 45 ~~l~~~~~~~vLDvGcG~G~~~~~la~----~------~~~v~gvD~s~~~l~~a~~~~~~~-~~i~~~~~d~~~~~~~~ 113 (216)
T 3ofk_A 45 LSLSSGAVSNGLEIGCAAGAFTEKLAP----H------CKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQFSTAE 113 (216)
T ss_dssp HHTTTSSEEEEEEECCTTSHHHHHHGG----G------EEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTCCCSC
T ss_pred HHCCCCCCCEEEEEECCCCHHHHHHHH----H------CCEEEEEECCHHHHHHHHHHHCCC-CEEECCCCCHHHHCCCC
T ss_conf 847998999099963889899999997----0------998999969989999999861546-22310102022323578
Q ss_pred CCEEEEEECCCCCC
Q ss_conf 95699981228875
Q gi|254780410|r 149 GFTFLVANEFFDSL 162 (362)
Q Consensus 149 ~~~iiiaNE~lDAl 162 (362)
...+|+++++|--+
T Consensus 114 ~fD~V~~~~vl~~~ 127 (216)
T 3ofk_A 114 LFDLIVVAEVLYYL 127 (216)
T ss_dssp CEEEEEEESCGGGS
T ss_pred CCCEEEECCCHHHC
T ss_conf 71489984557758