Query         gi|254780410|ref|YP_003064823.1| hypothetical protein CLIBASIA_01475 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 362
No_of_seqs    135 out of 1570
Neff          7.1 
Searched_HMMs 23785
Date          Mon May 30 10:39:15 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780410.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1zkd_A DUF185; X-RAY, NESG, RP 100.0       0       0  724.0  32.8  352    2-361     4-364 (387)
  2 1wy7_A Hypothetical protein PH  97.5 0.00053 2.2E-08   46.0   8.7   95   46-157    25-120 (207)
  3 3fut_A Dimethyladenosine trans  97.3   0.001 4.2E-08   44.0   8.2   86   18-134     7-92  (271)
  4 1qam_A ERMC' methyltransferase  97.1  0.0019 8.1E-08   42.1   7.4   75   42-140     7-81  (244)
  5 2aot_A HMT, histamine N-methyl  97.1  0.0024   1E-07   41.4   7.8   68   63-132    36-104 (292)
  6 3gru_A Dimethyladenosine trans  97.1  0.0026 1.1E-07   41.2   8.0   70   40-132    25-94  (295)
  7 1zq9_A Probable dimethyladenos  97.0  0.0037 1.6E-07   40.1   8.1   68   43-133     6-73  (285)
  8 1yub_A Ermam, rRNA methyltrans  96.9 0.00036 1.5E-08   47.1   2.2   69   40-131     4-72  (245)
  9 1ne2_A Hypothetical protein TA  96.8   0.008 3.3E-07   37.9   9.0   90   49-159    30-120 (200)
 10 3dtn_A Putative methyltransfer  96.8   0.004 1.7E-07   40.0   7.4   78   77-163    43-123 (234)
 11 1wzn_A SAM-dependent methyltra  96.8   0.012 4.9E-07   36.8   9.7   67   64-140    27-93  (252)
 12 2h1r_A Dimethyladenosine trans  96.8  0.0018 7.5E-08   42.3   5.4   66   43-131    20-85  (299)
 13 1i4w_A Mitochondrial replicati  96.7  0.0062 2.6E-07   38.6   7.8   73   42-132    29-104 (353)
 14 1qyr_A KSGA, high level kasuga  96.7  0.0027 1.1E-07   41.1   5.9   84   64-166    10-102 (252)
 15 1xtp_A LMAJ004091AAA; SGPP, st  96.7   0.013 5.3E-07   36.5   9.2  156   68-301    83-241 (254)
 16 3bus_A REBM, methyltransferase  96.7   0.021 8.7E-07   35.0  10.2  174   59-297    42-215 (273)
 17 3ftd_A Dimethyladenosine trans  96.7  0.0052 2.2E-07   39.2   6.9   67   40-128     6-72  (249)
 18 3gu3_A Methyltransferase; alph  96.6  0.0031 1.3E-07   40.7   5.6   81   76-163    20-103 (284)
 19 2f8l_A Hypothetical protein LM  96.6   0.012 5.1E-07   36.7   8.4  104   44-157   103-209 (344)
 20 3dh0_A SAM dependent methyltra  96.6  0.0071   3E-07   38.3   7.2  150   71-297    30-180 (219)
 21 1im8_A YECO; methyltransferase  96.5    0.01 4.3E-07   37.2   7.8   83   45-134    16-108 (244)
 22 3iv6_A Putative Zn-dependent a  96.5  0.0081 3.4E-07   37.9   7.3   79   75-163    42-124 (261)
 23 1ve3_A Hypothetical protein PH  96.5   0.016 6.6E-07   35.9   8.7   61   67-138    28-88  (227)
 24 3dlc_A Putative S-adenosyl-L-m  96.5  0.0091 3.8E-07   37.5   7.2   65   63-140    32-98  (219)
 25 3hnr_A Probable methyltransfer  96.5  0.0064 2.7E-07   38.5   6.3   44   78-131    45-88  (220)
 26 1dl5_A Protein-L-isoaspartate   96.4   0.023 9.8E-07   34.7   8.7   89   69-164    66-159 (317)
 27 3ou2_A SAM-dependent methyltra  96.4    0.02 8.5E-07   35.1   8.4   61   58-128    25-86  (218)
 28 2yqz_A Hypothetical protein TT  96.4  0.0079 3.3E-07   37.9   6.3   53   78-140    39-91  (263)
 29 1xxl_A YCGJ protein; structura  96.4   0.013 5.5E-07   36.4   7.4   56   68-133    11-66  (239)
 30 2o57_A Putative sarcosine dime  96.4   0.028 1.2E-06   34.1   9.1  160   73-302    77-238 (297)
 31 2p35_A Trans-aconitate 2-methy  96.3  0.0043 1.8E-07   39.7   4.9   84   68-163    23-109 (259)
 32 3m70_A Tellurite resistance pr  96.3   0.011 4.8E-07   36.8   7.0   81   74-164   116-199 (286)
 33 2ex4_A Adrenal gland protein A  96.3   0.011 4.7E-07   36.9   6.7   49   76-133    77-125 (241)
 34 3g5t_A Trans-aconitate 3-methy  96.2   0.027 1.1E-06   34.3   8.5   66   52-132    18-83  (299)
 35 2vdw_A Vaccinia virus capping   96.2   0.073 3.1E-06   31.3  19.6  224   29-304     6-252 (302)
 36 2b3t_A Protein methyltransfera  96.2   0.037 1.6E-06   33.3   9.1   75   48-134    81-157 (276)
 37 3ccf_A Cyclopropane-fatty-acyl  96.2  0.0031 1.3E-07   40.7   3.4   47   75-131    54-100 (279)
 38 1nv8_A HEMK protein; class I a  96.2    0.05 2.1E-06   32.4   9.5   63   60-134   108-170 (284)
 39 1vl5_A Unknown conserved prote  96.1   0.017 7.3E-07   35.6   7.0   54   70-133    29-82  (260)
 40 3h2b_A SAM-dependent methyltra  96.0   0.046 1.9E-06   32.7   8.9   41   81-131    44-84  (203)
 41 2p8j_A S-adenosylmethionine-de  96.0   0.013 5.3E-07   36.5   5.8   76   79-163    24-103 (209)
 42 3cc8_A Putative methyltransfer  95.9   0.012 5.3E-07   36.6   5.6   42   78-129    32-73  (230)
 43 3mgg_A Methyltransferase; NYSG  95.9   0.036 1.5E-06   33.4   7.8   54   70-131    29-82  (276)
 44 2pxx_A Uncharacterized protein  95.8   0.013 5.3E-07   36.5   5.2  118   77-243    41-162 (215)
 45 2i6g_A Putative methyltransfer  95.8   0.042 1.8E-06   32.9   7.9   50   74-133    27-76  (199)
 46 3grz_A L11 mtase, ribosomal pr  95.8   0.035 1.5E-06   33.5   7.4   95   56-160    36-136 (205)
 47 1dus_A MJ0882; hypothetical pr  95.8   0.027 1.1E-06   34.2   6.8   74   44-133    20-97  (194)
 48 2b25_A Hypothetical protein; s  95.8   0.058 2.4E-06   32.0   8.5   57   71-134    98-154 (336)
 49 1jg1_A PIMT;, protein-L-isoasp  95.8   0.071   3E-06   31.4   8.9  136    8-165    23-174 (235)
 50 3f4k_A Putative methyltransfer  95.8   0.048   2E-06   32.6   8.0   56   76-140    44-101 (257)
 51 2gs9_A Hypothetical protein TT  95.7   0.078 3.3E-06   31.1   8.9   60   58-130    17-76  (211)
 52 1i1n_A Protein-L-isoaspartate   95.6    0.11 4.8E-06   30.0   9.5  105   10-133    13-125 (226)
 53 2fk8_A Methoxy mycolic acid sy  95.6    0.11 4.5E-06   30.1   9.4   61   64-133    76-136 (318)
 54 1vbf_A 231AA long hypothetical  95.6   0.087 3.6E-06   30.8   8.8   66   46-132    49-114 (231)
 55 3dmg_A Probable ribosomal RNA   95.6   0.044 1.8E-06   32.8   7.2   43   80-132   235-277 (381)
 56 3g5l_A Putative S-adenosylmeth  95.6   0.051 2.2E-06   32.4   7.5   44   78-130    44-87  (253)
 57 1yb2_A Hypothetical protein TA  95.6   0.017 7.1E-07   35.7   5.1   59   69-134   101-159 (275)
 58 1o54_A SAM-dependent O-methylt  95.6   0.084 3.5E-06   30.9   8.6   58   70-134   104-161 (277)
 59 3ofk_A Nodulation protein S; N  95.5   0.064 2.7E-06   31.7   7.9   80   72-162    45-127 (216)
 60 1y8c_A S-adenosylmethionine-de  95.5   0.059 2.5E-06   32.0   7.5   65   64-139    24-88  (246)
 61 3jwh_A HEN1; methyltransferase  95.4   0.098 4.1E-06   30.4   8.6   92   63-165    17-118 (217)
 62 1nkv_A Hypothetical protein YJ  95.4    0.11 4.8E-06   30.0   8.7  152   74-296    32-185 (256)
 63 3kkz_A Uncharacterized protein  95.3   0.035 1.5E-06   33.5   6.0   49   76-133    44-92  (267)
 64 2p7i_A Hypothetical protein; p  95.3   0.052 2.2E-06   32.3   6.7   53   67-131    33-85  (250)
 65 2avn_A Ubiquinone/menaquinone   95.0   0.058 2.4E-06   32.0   6.4   44   76-129    52-95  (260)
 66 3l8d_A Methyltransferase; stru  95.0   0.077 3.2E-06   31.2   7.0   44   77-130    52-95  (242)
 67 3mb5_A SAM-dependent methyltra  95.0   0.075 3.2E-06   31.2   6.9   94   33-134    30-142 (255)
 68 3gdh_A Trimethylguanosine synt  95.0    0.16 6.6E-06   29.0   8.5   68   61-140    63-132 (241)
 69 1u2z_A Histone-lysine N-methyl  94.9   0.017 7.2E-07   35.6   3.5   74   58-139   222-295 (433)
 70 1fbn_A MJ fibrillarin homologu  94.9   0.032 1.4E-06   33.7   4.9   66   52-130    53-118 (230)
 71 3bkw_A MLL3908 protein, S-aden  94.9    0.11 4.6E-06   30.1   7.6   83   25-129     2-85  (243)
 72 3gjy_A Spermidine synthase; AP  94.9    0.13 5.3E-06   29.7   7.8   64   59-130    70-133 (317)
 73 3eey_A Putative rRNA methylase  94.8    0.22 9.4E-06   28.0   9.1   65   68-140    13-79  (197)
 74 3bxo_A N,N-dimethyltransferase  94.8    0.22 9.4E-06   28.0   9.0   55   65-130    28-82  (239)
 75 3e8s_A Putative SAM dependent   94.8   0.043 1.8E-06   32.9   5.3   45   78-132    52-96  (227)
 76 1xva_A Glycine N-methyltransfe  94.8    0.16 6.6E-06   29.0   8.1   85   35-132     3-100 (292)
 77 1i9g_A Hypothetical protein RV  94.8    0.09 3.8E-06   30.7   6.9   58   69-133    90-147 (280)
 78 3jwg_A HEN1, methyltransferase  94.8   0.099 4.1E-06   30.4   7.0   88   67-165    21-118 (219)
 79 2pwy_A TRNA (adenine-N(1)-)-me  94.8     0.1 4.2E-06   30.4   7.1   58   70-134    88-145 (258)
 80 3ndi_A Methyltransferase; S-ad  94.7     0.2 8.3E-06   28.3   8.5  229   55-307    84-340 (416)
 81 3cgg_A SAM-dependent methyltra  94.7   0.082 3.4E-06   31.0   6.5   45   77-131    45-89  (195)
 82 1p91_A Ribosomal RNA large sub  94.7    0.13 5.6E-06   29.5   7.6   61   63-131    70-130 (269)
 83 3ege_A Putative methyltransfer  94.6   0.042 1.8E-06   33.0   4.8   80   69-163    25-108 (261)
 84 3id6_C Fibrillarin-like rRNA/T  94.6   0.048   2E-06   32.5   5.1   67   52-130    55-121 (232)
 85 3i9f_A Putative type 11 methyl  94.6   0.081 3.4E-06   31.0   6.2   43   79-131    18-60  (170)
 86 1r18_A Protein-L-isoaspartate(  94.5    0.14   6E-06   29.3   7.3  113    8-133    18-137 (227)
 87 1ri5_A MRNA capping enzyme; me  94.5    0.27 1.1E-05   27.5  14.2   60   64-132    50-109 (298)
 88 3evz_A Methyltransferase; NYSG  94.5    0.17   7E-06   28.9   7.6   75   74-156    51-130 (230)
 89 1l3i_A Precorrin-6Y methyltran  94.5    0.13 5.4E-06   29.6   7.0   57   74-140    29-87  (192)
 90 2pbf_A Protein-L-isoaspartate   94.4   0.039 1.6E-06   33.2   4.3   92   29-133    41-132 (227)
 91 1zx0_A Guanidinoacetate N-meth  94.4   0.058 2.4E-06   32.0   5.1   53   76-137    58-110 (236)
 92 2ipx_A RRNA 2'-O-methyltransfe  94.4   0.046 1.9E-06   32.7   4.6   69   52-132    56-124 (233)
 93 3e23_A Uncharacterized protein  94.4    0.12 4.9E-06   30.0   6.6   46   76-131    41-86  (211)
 94 3lcc_A Putative methyl chlorid  94.3    0.13 5.3E-06   29.7   6.7   54   69-133    58-111 (235)
 95 3m33_A Uncharacterized protein  94.3    0.12 5.2E-06   29.8   6.6   65   49-132    28-92  (226)
 96 3fzg_A 16S rRNA methylase; met  94.3   0.067 2.8E-06   31.6   5.2   77   78-162    49-128 (200)
 97 3b3f_A Histone-arginine methyl  94.2    0.21 8.7E-06   28.2   7.6   75   79-164    47-126 (341)
 98 3lpm_A Putative methyltransfer  94.1    0.12   5E-06   29.9   6.2   71   78-157    49-127 (259)
 99 2yvl_A TRMI protein, hypotheti  94.0    0.18 7.5E-06   28.7   7.0  101   30-140    29-145 (248)
100 2okc_A Type I restriction enzy  93.9    0.23 9.8E-06   27.9   7.4   78   45-133   149-231 (445)
101 3d2l_A SAM-dependent methyltra  93.8     0.2 8.3E-06   28.4   6.9   50   79-139    34-83  (243)
102 2yxe_A Protein-L-isoaspartate   93.8    0.22 9.1E-06   28.1   7.1   74   42-134    53-126 (215)
103 2yxd_A Probable cobalt-precorr  93.8    0.18 7.7E-06   28.6   6.6   96   45-167     6-104 (183)
104 1g8a_A Fibrillarin-like PRE-rR  93.6   0.077 3.2E-06   31.2   4.5   75   46-132    44-120 (227)
105 3i53_A O-methyltransferase; CO  93.6    0.37 1.5E-05   26.5   8.0  150   78-296   169-319 (332)
106 3c3p_A Methyltransferase; NP_9  93.5    0.21 8.9E-06   28.2   6.7   73   53-139    38-112 (210)
107 3lcv_B Sisomicin-gentamicin re  93.4   0.029 1.2E-06   34.1   2.0   80   76-163   130-212 (281)
108 3dr5_A Putative O-methyltransf  93.3    0.39 1.7E-05   26.3   7.7   77   53-140    35-114 (221)
109 1qzz_A RDMB, aclacinomycin-10-  93.3    0.45 1.9E-05   25.9   8.0  149   77-295   181-336 (374)
110 3dli_A Methyltransferase; PSI-  93.2    0.24   1E-05   27.8   6.5   42   79-130    42-83  (240)
111 3e05_A Precorrin-6Y C5,15-meth  93.1    0.25 1.1E-05   27.6   6.5   55   72-134    34-88  (204)
112 2r3s_A Uncharacterized protein  93.1    0.48   2E-05   25.7   8.2   47   76-131   163-209 (335)
113 3duw_A OMT, O-methyltransferas  93.0    0.24   1E-05   27.7   6.3   67   54-134    41-107 (223)
114 1or8_A Protein arginine N-meth  92.8    0.23 9.6E-06   27.9   6.0   75   80-165    59-139 (340)
115 2nxc_A L11 mtase, ribosomal pr  92.8    0.31 1.3E-05   27.0   6.6   61   65-136   108-168 (254)
116 2fyt_A Protein arginine N-meth  92.7    0.48   2E-05   25.7   7.5   76   79-164    65-145 (340)
117 2esr_A Methyltransferase; stru  92.7    0.37 1.5E-05   26.5   6.9   68   50-133    10-77  (177)
118 2gpy_A O-methyltransferase; st  92.7    0.47   2E-05   25.8   7.4   67   53-134    36-102 (233)
119 2ip2_A Probable phenazine-spec  92.6    0.35 1.5E-05   26.7   6.6  110   79-246   168-278 (334)
120 3hem_A Cyclopropane-fatty-acyl  92.5    0.56 2.4E-05   25.2   9.8  210   12-296    19-241 (302)
121 1kpg_A CFA synthase;, cyclopro  92.5    0.56 2.4E-05   25.2   9.4  173   60-297    46-227 (287)
122 3hvi_A Catechol O-methyltransf  92.5    0.27 1.1E-05   27.4   6.0   73   53-139    40-114 (221)
123 1tw3_A COMT, carminomycin 4-O-  92.4     0.5 2.1E-05   25.6   7.2  114   75-245   180-293 (360)
124 1nw3_A Histone methyltransfera  92.3   0.093 3.9E-06   30.6   3.4   72   59-138   136-207 (416)
125 1pjz_A Thiopurine S-methyltran  92.3    0.35 1.5E-05   26.6   6.3   57   67-133    11-67  (203)
126 3bkx_A SAM-dependent methyltra  92.3    0.61 2.5E-05   25.0   7.8  173   68-295    33-216 (275)
127 1yzh_A TRNA (guanine-N(7)-)-me  92.1     0.3 1.3E-05   27.1   5.8   48   75-131    39-86  (214)
128 2fca_A TRNA (guanine-N(7)-)-me  92.0     0.3 1.2E-05   27.2   5.7   48   76-132    37-84  (213)
129 2ozv_A Hypothetical protein AT  91.8    0.59 2.5E-05   25.1   7.0   73   77-157    35-123 (260)
130 1nt2_A Fibrillarin-like PRE-rR  91.8    0.25 1.1E-05   27.6   5.1   67   52-132    37-103 (210)
131 2ih2_A Modification methylase   91.7   0.076 3.2E-06   31.2   2.4   60   46-123    18-77  (421)
132 3khk_A Type I restriction-modi  91.6    0.72   3E-05   24.5   7.7   78   45-134   223-307 (544)
133 1vlm_A SAM-dependent methyltra  91.5    0.28 1.2E-05   27.3   5.1   34   81-128    50-83  (219)
134 1x19_A CRTF-related protein; m  91.4    0.75 3.2E-05   24.4   9.3   72   51-131   159-234 (359)
135 1g6q_1 HnRNP arginine N-methyl  91.3    0.76 3.2E-05   24.3   8.7   74   80-163    40-119 (328)
136 3ggd_A SAM-dependent methyltra  91.2    0.58 2.4E-05   25.2   6.4   44   78-131    56-99  (245)
137 3ckk_A TRNA (guanine-N(7)-)-me  90.5    0.47   2E-05   25.8   5.5   50   72-129    40-89  (235)
138 3b3j_A Histone-arginine methyl  90.4    0.92 3.9E-05   23.8   7.0   73   79-162   159-236 (480)
139 3hm2_A Precorrin-6Y C5,15-meth  90.2    0.65 2.7E-05   24.8   6.0   55   72-134    19-73  (178)
140 3gwz_A MMCR; methyltransferase  90.1    0.97 4.1E-05   23.6   9.3  135   52-243   172-310 (369)
141 3ocj_A Putative exported prote  90.1    0.97 4.1E-05   23.6   6.9   48   79-133   119-166 (305)
142 3lbf_A Protein-L-isoaspartate   90.0    0.99 4.2E-05   23.6  10.5  109    2-133     4-122 (210)
143 2fhp_A Methylase, putative; al  89.8    0.65 2.7E-05   24.8   5.7   83   34-133     8-90  (187)
144 2kw5_A SLR1183 protein; struct  89.8    0.46 1.9E-05   25.8   4.9   50   80-139    31-80  (202)
145 3lkd_A Type I restriction-modi  89.7    0.58 2.4E-05   25.2   5.4   74   45-131   195-269 (542)
146 3kr9_A SAM-dependent methyltra  89.7     1.1 4.4E-05   23.4   6.9   51   76-134    13-63  (225)
147 2i62_A Nicotinamide N-methyltr  89.3    0.67 2.8E-05   24.7   5.5   58   75-141    53-110 (265)
148 3frh_A 16S rRNA methylase; met  89.1     0.4 1.7E-05   26.3   4.2  102   48-163    77-182 (253)
149 3dp7_A SAM-dependent methyltra  89.0     1.2 4.9E-05   23.1   7.2   51   72-131   173-223 (363)
150 3mcz_A O-methyltransferase; ad  89.0     1.2   5E-05   23.1   8.5  145   46-246   143-293 (352)
151 3bgv_A MRNA CAP guanine-N7 met  88.7     1.2 5.2E-05   22.9  12.7  183   76-303    32-237 (313)
152 2a14_A Indolethylamine N-methy  88.5     0.3 1.3E-05   27.1   3.3   66   65-139    39-107 (263)
153 3adn_A Spermidine synthase; am  88.4     1.3 5.4E-05   22.8   6.7   78   42-132    48-129 (294)
154 2vdv_E TRNA (guanine-N(7)-)-me  88.3    0.98 4.1E-05   23.6   5.7   48   76-131    47-94  (246)
155 1xj5_A Spermidine synthase 1;   88.0     1.3 5.7E-05   22.6   6.4   78   42-132    85-166 (334)
156 3c3y_A Pfomt, O-methyltransfer  87.8     1.4 5.9E-05   22.6   7.0   67   54-134    53-119 (237)
157 3g2m_A PCZA361.24; SAM-depende  87.7    0.54 2.3E-05   25.4   4.1   49   76-134    80-128 (299)
158 3lst_A CALO1 methyltransferase  87.5       1 4.3E-05   23.5   5.5  132   52-244   154-290 (348)
159 1ws6_A Methyltransferase; stru  87.1     1.5 6.4E-05   22.3   7.0   68   51-134    20-87  (171)
160 3lec_A NADB-rossmann superfami  86.9     1.6 6.6E-05   22.2   7.1   51   76-134    19-69  (230)
161 2hnk_A SAM-dependent O-methylt  86.7     1.6 6.7E-05   22.1   7.5   73   53-139    42-116 (239)
162 3dxy_A TRNA (guanine-N(7)-)-me  86.6     1.4 5.8E-05   22.6   5.7   47   76-131    33-79  (218)
163 3fpf_A Mtnas, putative unchara  86.6     1.6 6.8E-05   22.1   7.4   56   71-134   115-170 (298)
164 3g07_A 7SK snRNA methylphospha  86.3     1.1 4.5E-05   23.3   5.0   48   78-133    46-93  (292)
165 2avd_A Catechol-O-methyltransf  85.4     1.6 6.8E-05   22.1   5.6   68   53-134    51-118 (229)
166 3cbg_A O-methyltransferase; cy  84.6       2 8.5E-05   21.5   6.2   72   54-139    55-128 (232)
167 1uir_A Polyamine aminopropyltr  84.6     1.7 7.2E-05   21.9   5.4   74   46-132    50-123 (314)
168 2i7c_A Spermidine synthase; tr  84.5       2 8.5E-05   21.5   6.2   78   42-132    43-124 (283)
169 2h00_A Methyltransferase 10 do  83.5     2.2 9.3E-05   21.2   7.2   60   66-133    51-112 (254)
170 2qy6_A UPF0209 protein YFCK; s  83.4     2.2 9.4E-05   21.1   5.8   82   47-131    27-117 (257)
171 1mjf_A Spermidine synthase; sp  83.2     2.3 9.6E-05   21.1   6.7   72   46-131    48-119 (281)
172 3p2e_A 16S rRNA methylase; met  83.0     1.1 4.5E-05   23.4   3.8   48   74-130    21-68  (225)
173 2qfm_A Spermine synthase; sper  82.9     1.4 5.7E-05   22.6   4.3   75   42-132   155-233 (364)
174 3bwc_A Spermidine synthase; SA  82.6     2.4  0.0001   20.9   6.7   79   42-133    60-142 (304)
175 1iy9_A Spermidine synthase; ro  82.1     2.5 0.00011   20.8   6.9   74   46-132    48-121 (275)
176 2pt6_A Spermidine synthase; tr  82.1     2.5 0.00011   20.8   6.9   78   42-132    81-162 (321)
177 3mti_A RRNA methylase; SAM-dep  82.1     2.5 0.00011   20.8   8.6   53   76-139    21-74  (185)
178 3gnl_A Uncharacterized protein  81.8     2.4  0.0001   20.9   5.2   55   77-139    20-76  (244)
179 1inl_A Spermidine synthase; be  81.3     2.7 0.00011   20.6   6.6   78   42-132    55-136 (296)
180 2ar0_A M.ecoki, type I restric  79.1     3.1 0.00013   20.1  10.9   75   45-130   147-231 (541)
181 2b2c_A Spermidine synthase; be  78.2       2 8.6E-05   21.4   3.9   78   42-132    73-154 (314)
182 2e58_A MNMC2; tRNA wobble urid  78.2     3.3 0.00014   20.0   6.4   91   27-120    36-136 (308)
183 2cmg_A Spermidine synthase; tr  78.1     1.6 6.6E-05   22.2   3.3   75   42-132    38-116 (262)
184 2g72_A Phenylethanolamine N-me  77.5    0.92 3.9E-05   23.8   2.0   63   67-139    61-123 (289)
185 1sui_A Caffeoyl-COA O-methyltr  75.6     3.9 0.00016   19.5   7.2   68   53-134    61-128 (247)
186 2frn_A Hypothetical protein PH  75.5       3 0.00013   20.3   4.1   44   80-132   127-170 (278)
187 2o07_A Spermidine synthase; st  75.3       4 0.00017   19.5   6.2   78   42-132    60-141 (304)
188 3a27_A TYW2, uncharacterized p  72.2     4.7  0.0002   19.0   6.7   49   75-132   117-165 (272)
189 2qm3_A Predicted methyltransfe  69.5     5.3 0.00022   18.6   8.4   65   60-134   155-219 (373)
190 3bzb_A Uncharacterized protein  69.3     2.1 8.7E-05   21.4   2.1   64   55-130    52-123 (281)
191 2py6_A Methyltransferase FKBM;  69.2     5.4 0.00023   18.5   5.1   48   79-132   227-274 (409)
192 3g89_A Ribosomal RNA small sub  63.9     6.8 0.00029   17.8   8.5  138    1-158    10-160 (249)
193 1htw_A HI0065; nucleotide-bind  63.5     6.9 0.00029   17.8   4.2   63   50-117     8-72  (158)
194 2zfu_A Nucleomethylin, cerebra  57.3     4.2 0.00018   19.2   1.9   22   75-96     64-85  (215)
195 3htx_A HEN1; HEN1, small RNA m  54.9     9.6  0.0004   16.8   4.0  160   66-239   712-894 (950)
196 2ift_A Putative methylase HI07  52.7      10 0.00044   16.6   7.2   68   50-133    32-99  (201)
197 2yx1_A Hypothetical protein MJ  51.8      11 0.00045   16.5   5.0   16  212-227   222-237 (336)
198 2gb4_A Thiopurine S-methyltran  51.1      11 0.00046   16.4   5.8   60   53-130    50-110 (252)
199 2fpo_A Methylase YHHF; structu  50.2      11 0.00048   16.3   7.0   68   49-132    32-99  (202)
200 1jsx_A Glucose-inhibited divis  49.4      12 0.00049   16.2   6.9   74   63-146    50-127 (207)
201 2ofk_A 3-methyladenine DNA gly  48.7     7.9 0.00033   17.4   2.2   31  277-307   141-171 (183)
202 1kyz_A COMT, caffeic acid 3-O-  43.2      14 0.00061   15.6   6.0   60   52-119   169-233 (365)
203 1gjy_A Sorcin, CP-22, V19; cal  43.1      14  0.0006   15.7   2.8   13   15-27     14-26  (167)
204 2qe6_A Uncharacterized protein  38.8      17  0.0007   15.2   3.4   46   81-133    80-127 (274)
205 1k94_A Grancalcin; penta-EF-ha  36.8      18 0.00076   14.9   3.4   12   15-26     12-23  (165)
206 3mag_A VP39; methylated adenin  36.4      18 0.00077   14.9   5.0   52   65-120    47-98  (307)
207 1vpt_A VP39; RNA CAP, poly(A)   35.2      19  0.0008   14.8   5.0   52   65-120    62-113 (348)
208 2jg6_A DNA-3-methyladenine gly  34.1      17 0.00072   15.1   2.0   29  279-307   143-171 (186)
209 3cvo_A Methyltransferase-like   29.1      24   0.001   14.1   5.9   42   80-132    32-73  (202)
210 2w6a_A ARF GTPase-activating p  29.0      20 0.00085   14.6   1.7   11  292-302     6-16  (63)
211 1zg3_A Isoflavanone 4'-O-methy  28.6      24   0.001   14.1   2.4   31   80-118   195-225 (358)
212 1fp2_A Isoflavone O-methytrans  27.6      25  0.0011   13.9   3.4   33   78-118   188-220 (352)
213 1sfu_A 34L protein; protein/Z-  26.9      20 0.00086   14.6   1.4   28   46-73     26-56  (75)
214 1fp1_D Isoliquiritigenin 2'-O-  25.8      27  0.0011   13.7   4.9   59   52-118   178-241 (372)
215 2zwa_A Leucine carboxyl methyl  25.4      28  0.0012   13.7   4.8   79   52-131    78-159 (695)
216 3k89_A Malonyl COA-ACP transac  25.2      26  0.0011   13.9   1.7   27  271-297   252-281 (314)
217 2as0_A Hypothetical protein PH  23.2      30  0.0013   13.4   7.3   54   34-90     51-108 (396)
218 2bm8_A Cephalosporin hydroxyla  22.8      31  0.0013   13.3   4.8   38   79-120    82-119 (236)
219 2qc3_A MCT, malonyl COA-acyl c  22.7      28  0.0012   13.6   1.5   22  271-292   244-265 (303)
220 1wxx_A TT1595, hypothetical pr  22.6      31  0.0013   13.3   6.6   19    5-23      5-23  (382)
221 2kax_A Protein S100-A5; EF-han  21.5      33  0.0014   13.2   2.1   13    1-13      1-13  (92)
222 2ec1_A Nucleoporin 50 kDa; ran  21.5      33  0.0014   13.2   3.0   18  164-181    20-37  (125)
223 2kvs_A Uncharacterized protein  21.3      22 0.00093   14.3   0.7   13   15-27      2-14  (80)

No 1  
>1zkd_A DUF185; X-RAY, NESG, RPR58, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.10A {Rhodopseudomonas palustris CGA009} SCOP: c.66.1.52
Probab=100.00  E-value=0  Score=723.98  Aligned_cols=352  Identities=41%  Similarity=0.668  Sum_probs=316.2

Q ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             84899999999981898049999998710898786468988888888645767117999999999999999838887621
Q gi|254780410|r    2 ENKLIRKIVNLIKKNGQMTVDQYFALCVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVR   81 (362)
Q Consensus         2 ~~~L~~~i~~~I~~~G~i~f~~fM~~aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~   81 (362)
                      .++|.++|+++|+++|||||++||++|||||++|||+++++||++||||||||+||+||++||+|+.++|+.++.|++++
T Consensus         4 ~t~L~~~i~~~I~~~GpIsf~~fM~~aLy~p~~GYY~~~~~iG~~GDF~TSpeis~~FG~~ia~~~~~~~~~~~~p~~~~   83 (387)
T 1zkd_A            4 QTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQTLR   83 (387)
T ss_dssp             SSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSSEE
T ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf             41799999999995699579999999718998634478998889987468740579999999999999999759997716


Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCC
Q ss_conf             41007864689888799997418564301210236369789999986411102310110434444569569998122887
Q gi|254780410|r   82 LVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANEFFDS  161 (362)
Q Consensus        82 ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDA  161 (362)
                      |||+|||+|+||+||++.++ ..|.++..++|++||+|+.|++.|+++|+.. .++.|+++++++|..++||+|||||||
T Consensus        84 ivE~GaG~G~L~~DIl~~~~-~~p~~~~~~~~~~vE~s~~Lr~~Q~~~L~~~-~~i~~~~~l~~~~~~~giiiANE~fDA  161 (387)
T 1zkd_A           84 LIEIGPGRGTMMADALRALR-VLPILYQSLSVHLVEINPVLRQKQQTLLAGI-RNIHWHDSFEDVPEGPAVILANEYFDV  161 (387)
T ss_dssp             EEEECCTTSHHHHHHHHHHT-TSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-SSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred             EEEECCCCCHHHHHHHHHHH-HCHHHHHCCEEEEEECCHHHHHHHHHHHCCC-CCEEEECCHHHCCCCCCEEEECCCCCC
T ss_conf             99967982078998999986-4815441345899936878889999872477-740474142117788814761223566


Q ss_pred             CCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCC---C-CCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEE
Q ss_conf             5235899915664689989960795352257643432234---6-33165684112793478999999997620570599
Q gi|254780410|r  162 LPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFL---T-CSDYFLGAIFENSPCRDREMQSISDRLACDGGTAI  237 (362)
Q Consensus       162 lPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L  237 (362)
                      ||||||++++++|+|++|++++++++.|...+.+.+....   . ....++|++.|+++....|.......+  ++|++|
T Consensus       162 lPv~~f~~~~~~w~E~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~--~~G~~L  239 (387)
T 1zkd_A          162 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRD--QGGAAL  239 (387)
T ss_dssp             SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHH--HCEEEE
T ss_pred             CCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHH--CCCCEE
T ss_conf             650479984883378753216521045402568645578763244014888847860658999998899986--488678


Q ss_pred             EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEHHHHHHHCCHHHHHHHHHHC
Q ss_conf             96243368588880776405767670001000345312688999999996898363323389999978979999998708
Q gi|254780410|r  238 VIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTTQGKFLEGLGIWQRAFSLMKQ  317 (362)
Q Consensus       238 ~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~sQ~~FL~~~GI~~r~~~l~~~  317 (362)
                      +|||||...+.++|+|+|++|+++|||.+||+|||||||||++|+++++++|+++.|++||++||+++||.+|++.+.++
T Consensus       240 ~IDYG~~~~~~g~~l~~~~~h~~~d~l~~pG~~DITahVdFs~L~~~~~~~g~~~~g~~tQ~~FL~~~GI~er~~~l~~~  319 (387)
T 1zkd_A          240 IIDYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAK  319 (387)
T ss_dssp             EEEEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHT
T ss_pred             EECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCC
T ss_conf             60332246765672556642545666468995626677498999999997799870645799999978999999999756


Q ss_pred             CCCHH--HHHHHHHHHHHCCCCHH--HCCCEEEEEEEECCCCC-CCCCC
Q ss_conf             46279--99999999861468822--31632699998078888-99888
Q gi|254780410|r  318 TARKD--ILLDSVKRLVSTSADKK--SMGELFKILVVSHEKVE-LMPFV  361 (362)
Q Consensus       318 ~~~~~--~~~~~~~rli~~l~~p~--~MGe~FKVl~~sk~~~~-~~~f~  361 (362)
                      .+...  .+..+++||+    +|+  +|||+||||++|+++.+ +++|-
T Consensus       320 ~~~~~~~~l~~~~krLi----~p~~~~MGe~FKVL~is~~~~~~~~~~~  364 (387)
T 1zkd_A          320 ATPQVSEDIAGALQRLT----GEGRGAMGSMFKVIGVSDPKIETLVALS  364 (387)
T ss_dssp             SCHHHHHHHHHHHHHHH----CEETTEETTTEEEEEEECTTCCCCTTTT
T ss_pred             CCHHHHHHHHHHHHHCC----CCCCCHHHHHEEEEEECCCCCCCCCCCC
T ss_conf             99899999999998625----9882101154789998279998777889


No 2  
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structural genomics; HET: SAH; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.66.1.32
Probab=97.52  E-value=0.00053  Score=45.95  Aligned_cols=95  Identities=15%  Similarity=0.217  Sum_probs=58.8

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             88864576711799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      -+.|.|.|++        |..++..-...|.-+.-.|+++|+|+|.|+...+..         ...+.+.+|+++...+.
T Consensus        25 l~q~~Tp~~i--------a~~~~~~a~~~~dl~g~~vlDlg~G~G~l~i~a~~~---------g~~~v~~vDid~~~~~~   87 (207)
T 1wy7_A           25 LEQYRTPGNA--------ASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL---------GAKEVICVEVDKEAVDV   87 (207)
T ss_dssp             GTCCCCCHHH--------HHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT---------TCSEEEEEESCHHHHHH
T ss_pred             CCCCCCCHHH--------HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHC---------CCCEEEEECCCHHHHHH
T ss_conf             1137999999--------999999998649879898999134256999999974---------99869998798999999


Q ss_pred             HHHHHHHCCCCHHCCC-CHHHCCCCCEEEEEEC
Q ss_conf             9864111023101104-3444456956999812
Q gi|254780410|r  126 QKKQLASYGDKINWYT-SLADVPLGFTFLVANE  157 (362)
Q Consensus       126 Q~~~l~~~~~~v~w~~-~l~~~~~~~~iiiaNE  157 (362)
                      -++++...+.++.++. +..+.+..+.+|++|-
T Consensus        88 a~~N~~~~~~~~~~~~~d~~~~~~~~D~ii~np  120 (207)
T 1wy7_A           88 LIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNP  120 (207)
T ss_dssp             HHHHTGGGTTSEEEEESCGGGCCCCCSEEEECC
T ss_pred             HHHHHHHCCCCCEEEECCHHHHHCCCCEEECCC
T ss_conf             999999839982799766788614654644488


No 3  
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus HB8} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.33  E-value=0.001  Score=44.04  Aligned_cols=86  Identities=20%  Similarity=0.342  Sum_probs=56.4

Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf             80499999987108987864689888888886457671179999999999999998388876214100786468988879
Q gi|254780410|r   18 QMTVDQYFALCVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDIL   97 (362)
Q Consensus        18 ~i~f~~fM~~aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL   97 (362)
                      |-+..++|+.      +|.+.++ .+|.  .|..++.+-.        .+++.   .+ +.+-.|+|+|||.|.|...++
T Consensus         7 p~~~r~~l~~------~~~~~kK-~lGQ--nFL~d~~i~~--------~iv~~---~~-~~~~~VlEIGpG~G~LT~~L~   65 (271)
T 3fut_A            7 PQSVRALLER------HGLFADK-RFGQ--NFLVSEAHLR--------RIVEA---AR-PFTGPVFEVGPGLGALTRALL   65 (271)
T ss_dssp             HHHHHHHHHH------TTCCCST-TSSC--CEECCHHHHH--------HHHHH---HC-CCCSCEEEECCTTSHHHHHHH
T ss_pred             HHHHHHHHHH------CCCCCCC-CCCC--CCCCCHHHHH--------HHHHH---HC-CCCCCEEEECCCCCHHHHHHH
T ss_conf             7999999997------6999887-7784--5038989999--------99996---58-999988996797719999999


Q ss_pred             HHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             9997418564301210236369789999986411102
Q gi|254780410|r   98 RVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        98 ~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      +.          ...++.||+-+.+....++++....
T Consensus        66 ~~----------~~~v~avE~D~~l~~~L~~~~~~~~   92 (271)
T 3fut_A           66 EA----------GAEVTAIEKDLRLRPVLEETLSGLP   92 (271)
T ss_dssp             HT----------TCCEEEEESCGGGHHHHHHHTTTSS
T ss_pred             HC----------CCCEEEEEECHHHHHHHHHHHHHCC
T ss_conf             60----------8967999837067888875433301


No 4  
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.06  E-value=0.0019  Score=42.09  Aligned_cols=75  Identities=15%  Similarity=0.248  Sum_probs=49.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHH
Q ss_conf             88888886457671179999999999999998388876214100786468988879999741856430121023636978
Q gi|254780410|r   42 PFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSER  121 (362)
Q Consensus        42 ~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~  121 (362)
                      ++|.  .|.+.+.+        .   ..+.+..+....-.|+|+|||.|.|..-+++.          ..+++.||+.+.
T Consensus         7 k~GQ--nFL~d~~i--------~---~~Iv~~~~~~~~d~VlEIGpG~G~LT~~L~~~----------~~~v~avEiD~~   63 (244)
T 1qam_A            7 KHSQ--NFITSKHN--------I---DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR----------CNFVTAIEIDHK   63 (244)
T ss_dssp             ---C--CBCCCHHH--------H---HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEECSCHH
T ss_pred             CCCC--CCCCCHHH--------H---HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC----------CCCEEEEEECHH
T ss_conf             8888--41479999--------9---99999567899997999738871999999855----------583069985301


Q ss_pred             HHHHHHHHHHHCCCCHHCC
Q ss_conf             9999986411102310110
Q gi|254780410|r  122 LTLIQKKQLASYGDKINWY  140 (362)
Q Consensus       122 l~~~Q~~~l~~~~~~v~w~  140 (362)
                      +.+.-+++..+. .++..+
T Consensus        64 l~~~L~~~~~~~-~n~~ii   81 (244)
T 1qam_A           64 LCKTTENKLVDH-DNFQVL   81 (244)
T ss_dssp             HHHHHHHHTTTC-CSEEEE
T ss_pred             HHHHHHHHHCCC-CCEEEE
T ss_conf             779999741447-765773


No 5  
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.06  E-value=0.0024  Score=41.42  Aligned_cols=68  Identities=22%  Similarity=0.220  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             99999999998388-87621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   63 LAIFLICAWEQHGF-PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        63 ia~~~~~~~~~~~~-p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +...+......++. .+.++|+|+|+|+|.++..|++.+....+.  ...++..||+|+.+.+.-+++++.
T Consensus        36 ~~~~l~~~l~~~~~~~~~~~VLdiGcG~G~~~~~il~~l~~~~~~--~~~~~~~vD~s~~~l~~ak~~~~~  104 (292)
T 2aot_A           36 MDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPG--VCINNEVVEPSAEQIAKYKELVAK  104 (292)
T ss_dssp             HHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTT--CEEEEEEECSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC--CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             999999999985167999869998797997789999988874478--777599998988999999999887


No 6  
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.05  E-value=0.0026  Score=41.23  Aligned_cols=70  Identities=16%  Similarity=0.259  Sum_probs=47.0

Q ss_pred             CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf             98888888864576711799999999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r   40 CNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS  119 (362)
Q Consensus        40 ~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s  119 (362)
                      +..+|.  .|.+.+.+        ...+++   ..+....-.|+|+|||.|.|...+++.          .-+++.||+.
T Consensus        25 kK~lGQ--NFL~d~~i--------~~kIv~---~~~~~~~d~VlEIGpG~G~LT~~Ll~~----------~~~v~aiEiD   81 (295)
T 3gru_A           25 KKKLGQ--CFLIDKNF--------VNKAVE---SANLTKDDVVLEIGLGKGILTEELAKN----------AKKVYVIEID   81 (295)
T ss_dssp             -----C--CEECCHHH--------HHHHHH---HTTCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEEESC
T ss_pred             CCCCCC--CCCCCHHH--------HHHHHH---HCCCCCCCEEEEECCCHHHHHHHHHHC----------CCCEEEEEEC
T ss_conf             887782--30289999--------999999---638999995999799746999999816----------8966999988


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7899999864111
Q gi|254780410|r  120 ERLTLIQKKQLAS  132 (362)
Q Consensus       120 ~~l~~~Q~~~l~~  132 (362)
                      +.|.+.-+++...
T Consensus        82 ~~l~~~L~~~~~~   94 (295)
T 3gru_A           82 KSLEPYANKLKEL   94 (295)
T ss_dssp             GGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             7999999976764


No 7  
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.97  E-value=0.0037  Score=40.14  Aligned_cols=68  Identities=22%  Similarity=0.368  Sum_probs=47.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHH
Q ss_conf             88888864576711799999999999999983888762141007864689888799997418564301210236369789
Q gi|254780410|r   43 FGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERL  122 (362)
Q Consensus        43 ~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l  122 (362)
                      +|.  .|.+.+.+        +..++   ...+..+.-.|+|+|||.|.|...+++.          ..+++.||+.+.+
T Consensus         6 LGQ--nFL~d~~i--------~~~Iv---~~~~~~~~d~VlEIGPG~G~LT~~Ll~~----------~~~v~aiE~D~~l   62 (285)
T 1zq9_A            6 IGQ--HILKNPLI--------INSII---DKAALRPTDVVLEVGPGTGNMTVKLLEK----------AKKVVACELDPRL   62 (285)
T ss_dssp             --C--CEECCHHH--------HHHHH---HHTCCCTTCEEEEECCTTSTTHHHHHHH----------SSEEEEEESCHHH
T ss_pred             CCC--CCCCCHHH--------HHHHH---HHHCCCCCCEEEEECCCCHHHHHHHHHC----------CCCEEEEEECHHH
T ss_conf             684--60779899--------99999---9708999997999689721999999804----------9966999987899


Q ss_pred             HHHHHHHHHHC
Q ss_conf             99998641110
Q gi|254780410|r  123 TLIQKKQLASY  133 (362)
Q Consensus       123 ~~~Q~~~l~~~  133 (362)
                      .+.-++++...
T Consensus        63 ~~~L~~~~~~~   73 (285)
T 1zq9_A           63 VAELHKRVQGT   73 (285)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHHCC
T ss_conf             99999876201


No 8  
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.86  E-value=0.00036  Score=47.10  Aligned_cols=69  Identities=14%  Similarity=0.294  Sum_probs=47.2

Q ss_pred             CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf             98888888864576711799999999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r   40 CNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS  119 (362)
Q Consensus        40 ~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s  119 (362)
                      ..++|.  .|.+.+.+-.           .+.+..+..+.-.|+|+|||.|.|..-+++.          ..+++.||+.
T Consensus         4 ~~k~GQ--nFL~d~~i~~-----------~Iv~~~~~~~~d~VlEIGpG~G~LT~~L~~~----------~~~v~aiE~D   60 (245)
T 1yub_A            4 NIKYSQ--NFLTSEKVLN-----------QIIKQLNLKETDTVYEIGTGKGHLTTKLAKI----------SKQVTSIELD   60 (245)
T ss_dssp             CCCSCC--CBCCCTTTHH-----------HHHHHCCCCSSEEEEECSCCCSSCSHHHHHH----------SSEEEESSSS
T ss_pred             CCCCCC--CCCCCHHHHH-----------HHHHHCCCCCCCEEEEECCCHHHHHHHHHHC----------CCCCEEECCC
T ss_conf             988787--1478989999-----------9999458999996899799735999999961----------6500403404


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             789999986411
Q gi|254780410|r  120 ERLTLIQKKQLA  131 (362)
Q Consensus       120 ~~l~~~Q~~~l~  131 (362)
                      +.|.+.-+++++
T Consensus        61 ~~l~~~l~~~~~   72 (245)
T 1yub_A           61 SHLFNLSSEKLK   72 (245)
T ss_dssp             CSSSSSSSCTTT
T ss_pred             HHHHHHHHHHHH
T ss_conf             466898875541


No 9  
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.85  E-value=0.008  Score=37.90  Aligned_cols=90  Identities=18%  Similarity=0.291  Sum_probs=56.0

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             64576711799999999999999983888762141007864689888799997418564301210236369789999986
Q gi|254780410|r   49 FVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        49 F~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      |.|.+++       -|.++.... ..|.-+.-.|+++|+|+|.|+...+.    .     ..-+.+.+|.|+...+.-++
T Consensus        30 Y~t~~~i-------aa~~~~~~~-~~gd~~Gk~VLDlGcGtG~l~i~a~~----~-----ga~~V~~vDid~~a~~~a~~   92 (200)
T 1ne2_A           30 YPTDAST-------AAYFLIEIY-NDGNIGGRSVIDAGTGNGILACGSYL----L-----GAESVTAFDIDPDAIETAKR   92 (200)
T ss_dssp             CCCCHHH-------HHHHHHHHH-HHTSSBTSEEEEETCTTCHHHHHHHH----T-----TBSEEEEEESCHHHHHHHHH
T ss_pred             CCCCHHH-------HHHHHHHHH-HCCCCCCCEEEECCCCHHHHHHHHHH----C-----CCCEEEEEECCHHHHHHHHH
T ss_conf             7998899-------999999998-66998939899875751099999996----7-----99879675089999999999


Q ss_pred             HHHHCCCCHHCC-CCHHHCCCCCEEEEEECCC
Q ss_conf             411102310110-4344445695699981228
Q gi|254780410|r  129 QLASYGDKINWY-TSLADVPLGFTFLVANEFF  159 (362)
Q Consensus       129 ~l~~~~~~v~w~-~~l~~~~~~~~iiiaNE~l  159 (362)
                      ++.    ++.|+ .++.+++....+||+|==|
T Consensus        93 N~~----~~~~~~~d~~~~~~~fD~Vi~NPPf  120 (200)
T 1ne2_A           93 NCG----GVNFMVADVSEISGKYDTWIMNPPF  120 (200)
T ss_dssp             HCT----TSEEEECCGGGCCCCEEEEEECCCC
T ss_pred             HHH----HCCCEEEEHHHCCCCCCEEEECCCC
T ss_conf             898----5785376521057754889877986


No 10 
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.84  E-value=0.004  Score=39.96  Aligned_cols=78  Identities=17%  Similarity=0.334  Sum_probs=49.9

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC-CHHHCC--CCCEEE
Q ss_conf             87621410078646898887999974185643012102363697899999864111023101104-344445--695699
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT-SLADVP--LGFTFL  153 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~-~l~~~~--~~~~ii  153 (362)
                      +.+..|+|+|+|+|.++..+++.    .|+    .+++.+|.|+.+.+..+++++.. .+|.++. ++.+.+  ....+|
T Consensus        43 ~~~~~VLDiGcG~G~~~~~l~~~----~~~----~~v~giD~s~~~l~~A~~~~~~~-~~v~~~~~D~~~~~~~~~fD~I  113 (234)
T 3dtn_A           43 TENPDILDLGAGTGLLSAFLMEK----YPE----ATFTLVDMSEKMLEIAKNRFRGN-LKVKYIEADYSKYDFEEKYDMV  113 (234)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHH----CTT----CEEEEEESCHHHHHHHHHHTCSC-TTEEEEESCTTTCCCCSCEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCHHHH
T ss_conf             99995999817685999999998----899----68999958504578999863027-7624774200134544551345


Q ss_pred             EEECCCCCCC
Q ss_conf             9812288752
Q gi|254780410|r  154 VANEFFDSLP  163 (362)
Q Consensus       154 iaNE~lDAlP  163 (362)
                      +++.+|-.+|
T Consensus       114 ~~~~~l~~l~  123 (234)
T 3dtn_A          114 VSALSIHHLE  123 (234)
T ss_dssp             EEESCGGGSC
T ss_pred             HHHHHHHCCC
T ss_conf             5577787089


No 11 
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.66.1.43
Probab=96.83  E-value=0.012  Score=36.75  Aligned_cols=67  Identities=15%  Similarity=0.243  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC
Q ss_conf             99999999983888762141007864689888799997418564301210236369789999986411102310110
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY  140 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~  140 (362)
                      ..++..++++.+....-.|+|+|+|+|.++..+.+.          ..+++-||.|+.+.+.-++++++...++.++
T Consensus        27 ~~~~~~~~~~~~~~~~~~ILDiGcGtG~~~~~l~~~----------g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~   93 (252)
T 1wzn_A           27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER----------GYEVVGLDLHEEMLRVARRKAKERNLKIEFL   93 (252)
T ss_dssp             HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEE
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             999999999735789898999547586999999976----------9989999746889999999776428752368


No 12 
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.80  E-value=0.0018  Score=42.34  Aligned_cols=66  Identities=21%  Similarity=0.315  Sum_probs=45.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHH
Q ss_conf             88888864576711799999999999999983888762141007864689888799997418564301210236369789
Q gi|254780410|r   43 FGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERL  122 (362)
Q Consensus        43 ~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l  122 (362)
                      +|.  .|.+.+.+        ...+++.   .+..+.=.|+|+|||.|.|...+++.          ..+++.||+.+.+
T Consensus        20 LGQ--nFL~D~~i--------~~kIv~~---~~~~~~d~VLEIGPG~G~LT~~Ll~~----------~~~v~aiE~D~~l   76 (299)
T 2h1r_A           20 QGQ--HLLKNPGI--------LDKIIYA---AKIKSSDIVLEIGCGTGNLTVKLLPL----------AKKVITIDIDSRM   76 (299)
T ss_dssp             -----CEECCHHH--------HHHHHHH---HCCCTTCEEEEECCTTSTTHHHHTTT----------SSEEEEECSCHHH
T ss_pred             CCC--CCCCCHHH--------HHHHHHH---CCCCCCCEEEEECCCHHHHHHHHHHC----------CCEEEEEECCCHH
T ss_conf             777--43789899--------9999984---58999898999689727999999823----------9907999777089


Q ss_pred             HHHHHHHHH
Q ss_conf             999986411
Q gi|254780410|r  123 TLIQKKQLA  131 (362)
Q Consensus       123 ~~~Q~~~l~  131 (362)
                      .+.-++.+.
T Consensus        77 ~~~L~e~~~   85 (299)
T 2h1r_A           77 ISEVKKRCL   85 (299)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             999997543


No 13 
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.75  E-value=0.0062  Score=38.62  Aligned_cols=73  Identities=15%  Similarity=0.247  Sum_probs=49.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHHHHHHHHH---HCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
Q ss_conf             8888888645767117999999999999999---8388876214100786468988879999741856430121023636
Q gi|254780410|r   42 PFGAVGDFVTAPEISQIFGEMLAIFLICAWE---QHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVET  118 (362)
Q Consensus        42 ~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~---~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~  118 (362)
                      .+|..  |..++.+..        .+++...   ....+++.+|+|+|||.|.|.+-+++..   .|     -+++++|+
T Consensus        29 ~~Gq~--fL~d~~l~~--------kIv~~l~l~~~~~~~~~~~IlEIgPG~G~lT~~Ll~~~---~p-----k~~i~iE~   90 (353)
T 1i4w_A           29 FYGFK--YLWNPTVYN--------KIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY---CP-----RQYSLLEK   90 (353)
T ss_dssp             GGGCC--CBCCHHHHH--------HHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH---CC-----SEEEEECC
T ss_pred             HHCHH--HCCCHHHHH--------HHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHC---CC-----CEEEEEEC
T ss_conf             63544--438999999--------99987367633357789969998999889999998525---88-----76999977


Q ss_pred             CHHHHHHHHHHHHH
Q ss_conf             97899999864111
Q gi|254780410|r  119 SERLTLIQKKQLAS  132 (362)
Q Consensus       119 s~~l~~~Q~~~l~~  132 (362)
                      .+.+.+.-++.+..
T Consensus        91 D~~~~~~L~~~~~~  104 (353)
T 1i4w_A           91 RSSLYKFLNAKFEG  104 (353)
T ss_dssp             CHHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHCC
T ss_conf             78899999987145


No 14 
>1qyr_A KSGA, high level kasugamycin resistance protein, S-; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24
Probab=96.74  E-value=0.0027  Score=41.12  Aligned_cols=84  Identities=15%  Similarity=0.143  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC--
Q ss_conf             999999999838887621410078646898887999974185643012102363697899999864111023101104--
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT--  141 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~--  141 (362)
                      ...+++.   .+....-.|+|+|||.|.|..-+++.          ..+++.||+-+.|.+..++++... .++.++.  
T Consensus        10 ~~~iv~~---~~~~~~d~vlEIGpG~G~LT~~Ll~~----------~~~v~avE~D~~l~~~L~~~~~~~-~~~~ii~~D   75 (252)
T 1qyr_A           10 IDSIVSA---INPQKGQAMVEIGPGLAALTEPVGER----------LDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQD   75 (252)
T ss_dssp             HHHHHHH---HCCCTTCCEEEECCTTTTTHHHHHTT----------CSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSC
T ss_pred             HHHHHHH---CCCCCCCEEEEECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHCC-CCEEEEECH
T ss_conf             9999984---48999796999899872999999816----------897699996212889999876317-762565011


Q ss_pred             ----CHHHC---CCCCEEEEEECCCCCCCEEE
Q ss_conf             ----34444---56956999812288752358
Q gi|254780410|r  142 ----SLADV---PLGFTFLVANEFFDSLPIKQ  166 (362)
Q Consensus       142 ----~l~~~---~~~~~iiiaNE~lDAlPv~~  166 (362)
                          ++++.   ...+..++||     ||.+.
T Consensus        76 ~l~~~~~~~~~~~~~~~~vvgN-----LPY~I  102 (252)
T 1qyr_A           76 AMTFNFGELAEKMGQPLRVFGN-----LPYNI  102 (252)
T ss_dssp             GGGCCHHHHHHHHTSCEEEEEE-----CCTTT
T ss_pred             HHHHCHHHHHCCCCCCEEEEEC-----CHHHH
T ss_conf             4552321221036897599946-----62889


No 15 
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative, SAM-dependent methyltransferase; HET: SAI; 1.94A {Leishmania major strain friedlin} SCOP: c.66.1.42
Probab=96.72  E-value=0.013  Score=36.55  Aligned_cols=156  Identities=11%  Similarity=0.028  Sum_probs=80.1

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHC
Q ss_conf             9999983888762141007864689888799997418564301210236369789999986411102310110-434444
Q gi|254780410|r   68 ICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADV  146 (362)
Q Consensus        68 ~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~  146 (362)
                      ..++..+.....-.++|+|+|.|.++..++...         ..++..||+|+.+.+.-++++.... .+.++ .++.+ 
T Consensus        83 ~~fl~~~~~~~~~~vLDiGcG~G~~t~~ll~~~---------~~~V~~vD~s~~~l~~a~~~~~~~~-~~~~~~~d~~~-  151 (254)
T 1xtp_A           83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL---------YATTDLLEPVKHMLEEAKRELAGMP-VGKFILASMET-  151 (254)
T ss_dssp             HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH---------CSEEEEEESCHHHHHHHHHHTTTSS-EEEEEESCGGG-
T ss_pred             HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC---------CCEEEEEECCHHHHHHHHHCCCCCC-EEEEEECCHHH-
T ss_conf             999985733589738996678859999999863---------9858999198899999864015774-27999778756-


Q ss_pred             CCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECC-C-HHHHHHHHH
Q ss_conf             56956999812288752358999156646899899607953522576434322346331656841127-9-347899999
Q gi|254780410|r  147 PLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFEN-S-PCRDREMQS  224 (362)
Q Consensus       147 ~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~-~-~~~~~~~~~  224 (362)
                                     +|.                  .++.+-           ..-.     ...+++ . +....+++.
T Consensus       152 ---------------~~~------------------~~~~fD-----------~I~~-----~~~l~hl~d~~~~~~l~~  182 (254)
T 1xtp_A          152 ---------------ATL------------------PPNTYD-----------LIVI-----QWTAIYLTDADFVKFFKH  182 (254)
T ss_dssp             ---------------CCC------------------CSSCEE-----------EEEE-----ESCGGGSCHHHHHHHHHH
T ss_pred             ---------------CCC------------------CCCCCC-----------EEEE-----EEEHHCCCHHHHHHHHHH
T ss_conf             ---------------888------------------777634-----------6764-----211004761457899999


Q ss_pred             HHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEHHHH
Q ss_conf             99976205705999624336858888077640576767000100034531268899999999689836332338999
Q gi|254780410|r  225 ISDRLACDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTTQGKF  301 (362)
Q Consensus       225 i~~~l~~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~sQ~~F  301 (362)
                      +.+.|+. +|.+++-|+......   ..   .     |      ..|-+..-.-..+.+.++++|++++.-..|..|
T Consensus       183 ~~~~Lkp-gG~ivi~e~~~~~~~---~~---~-----d------~~~~s~~rs~~~~~~l~~~aGf~vi~~~~q~~f  241 (254)
T 1xtp_A          183 CQQALTP-NGYIFFKENCSTGDR---FL---V-----D------KEDSSLTRSDIHYKRLFNESGVRVVKEAFQEEW  241 (254)
T ss_dssp             HHHHEEE-EEEEEEEEEBC--CC---EE---E-----E------TTTTEEEBCHHHHHHHHHHHTCCEEEEEECTTC
T ss_pred             HHHHCCC-CCEEEEEECCCCCCC---CE---E-----C------CCCCCEECCHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf             9998189-968999964777876---31---1-----1------567743489999999999879989999973699


No 16 
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.70  E-value=0.021  Score=35.04  Aligned_cols=174  Identities=15%  Similarity=0.125  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHH
Q ss_conf             99999999999999838887621410078646898887999974185643012102363697899999864111023101
Q gi|254780410|r   59 FGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKIN  138 (362)
Q Consensus        59 Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~  138 (362)
                      +.+...+.+..+.+.++.++.-.|+|+|.|.|.++..+++.         ...+++-++.|+......+++......   
T Consensus        42 ~~~a~~~~~~~l~~~~~l~~g~~VLDiGcG~G~~~~~~~~~---------~~~~v~gvD~s~~~~~~~~~~~~~~~~---  109 (273)
T 3bus_A           42 VDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATA---------RDVRVTGISISRPQVNQANARATAAGL---  109 (273)
T ss_dssp             HHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHH---------SCCEEEEEESCHHHHHHHHHHHHHTTC---
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHHHCC---
T ss_conf             99999999999998669899798999789799889999984---------598899997848889999999987177---


Q ss_pred             CCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHH
Q ss_conf             10434444569569998122887523589991566468998996079535225764343223463316568411279347
Q gi|254780410|r  139 WYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCR  218 (362)
Q Consensus       139 w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~  218 (362)
                              .....++.+  =...+|+.      .+=+-..+..                            ..++.-+..
T Consensus       110 --------~~~~~~~~~--d~~~l~~~------~~~fD~v~~~----------------------------~~l~h~~d~  145 (273)
T 3bus_A          110 --------ANRVTFSYA--DAMDLPFE------DASFDAVWAL----------------------------ESLHHMPDR  145 (273)
T ss_dssp             --------TTTEEEEEC--CTTSCCSC------TTCEEEEEEE----------------------------SCTTTSSCH
T ss_pred             --------CCEEECCCC--CCCCCCCC------CCCCCEEEEC----------------------------CCEEECCCH
T ss_conf             --------732100134--43468877------7762489864----------------------------626506649


Q ss_pred             HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEE
Q ss_conf             8999999997620570599962433685888807764057676700010003453126889999999968983633233
Q gi|254780410|r  219 DREMQSISDRLACDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTT  297 (362)
Q Consensus       219 ~~~~~~i~~~l~~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~s  297 (362)
                      ...++++.+.|+. +|.+++.|+-..... .+..+     ...+.+..++.  +......+.+.+..+++|++++...+
T Consensus       146 ~~~l~~~~r~Lkp-gG~l~i~~~~~~~~~-~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Gf~~~~~~~  215 (273)
T 3bus_A          146 GRALREMARVLRP-GGTVAIADFVLLAPV-EGAKK-----EAVDAFRAGGG--VLSLGGIDEYESDVRQAELVVTSTVD  215 (273)
T ss_dssp             HHHHHHHHTTEEE-EEEEEEEEEEESSCC-CHHHH-----HHHHHHHHHHT--CCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHHHHCCC-CCEEEEEEEECCCCC-CHHHH-----HHHHHHCCCCC--CCCCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf             9999999986599-968999999625886-43557-----65555124765--43568889999999967968999998


No 17 
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=96.66  E-value=0.0052  Score=39.17  Aligned_cols=67  Identities=16%  Similarity=0.289  Sum_probs=43.2

Q ss_pred             CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf             98888888864576711799999999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r   40 CNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS  119 (362)
Q Consensus        40 ~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s  119 (362)
                      +..+|.  .|.+.+.+-.        .+++   ..+..+.=.|+|+|||.|.|...+++.         ..-.++.+|+-
T Consensus         6 kk~lGQ--nFL~d~~~~~--------~iv~---~~~~~~~d~VlEIGpG~G~LT~~Ll~~---------~~~~v~aiE~D   63 (249)
T 3ftd_A            6 KKSFGQ--HLLVSEGVLK--------KIAE---ELNIEEGNTVVEVGGGTGNLTKVLLQH---------PLKKLYVIELD   63 (249)
T ss_dssp             --CCCS--SCEECHHHHH--------HHHH---HTTCCTTCEEEEEESCHHHHHHHHTTS---------CCSEEEEECCC
T ss_pred             CCCCCC--CCCCCHHHHH--------HHHH---HCCCCCCCEEEEECCCCCHHHHHHHHH---------CCCEEEEEEEC
T ss_conf             777884--5018989999--------9999---548999894999699876989999970---------45707899986


Q ss_pred             HHHHHHHHH
Q ss_conf             789999986
Q gi|254780410|r  120 ERLTLIQKK  128 (362)
Q Consensus       120 ~~l~~~Q~~  128 (362)
                      +.+...-++
T Consensus        64 ~~l~~~l~~   72 (249)
T 3ftd_A           64 REMVENLKS   72 (249)
T ss_dssp             HHHHHHHTT
T ss_pred             CCCHHHHHH
T ss_conf             620013222


No 18 
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.30A {Bacillus cereus atcc 14579} PDB: 2gh1_A
Probab=96.63  E-value=0.0031  Score=40.71  Aligned_cols=81  Identities=12%  Similarity=0.219  Sum_probs=50.9

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHCC--CCCEE
Q ss_conf             88762141007864689888799997418564301210236369789999986411102310110-4344445--69569
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADVP--LGFTF  152 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~~--~~~~i  152 (362)
                      .+.+..|+|+|.|+|.++..+.+.    .|   ...+++-|+.|+.+.+.-+++.+..+.++.++ .+..+++  ....+
T Consensus        20 ~~~~~~ILDiGcG~G~~~~~la~~----~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~   92 (284)
T 3gu3_A           20 ITKPVHIVDYGCGYGYLGLVLMPL----LP---EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDI   92 (284)
T ss_dssp             CCSCCEEEEETCTTTHHHHHHTTT----SC---TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHH----CC---CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEE
T ss_conf             699897999548798999999985----77---99889998498999999998666414200120011124798997579


Q ss_pred             EEEECCCCCCC
Q ss_conf             99812288752
Q gi|254780410|r  153 LVANEFFDSLP  163 (362)
Q Consensus       153 iiaNE~lDAlP  163 (362)
                      |+++.++-.+|
T Consensus        93 V~~~~~l~h~~  103 (284)
T 3gu3_A           93 AICHAFLLHMT  103 (284)
T ss_dssp             EEEESCGGGCS
T ss_pred             EEEHHHHHCCC
T ss_conf             98864765678


No 19 
>2f8l_A Hypothetical protein LMO1582; 16411011, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.59  E-value=0.012  Score=36.67  Aligned_cols=104  Identities=12%  Similarity=0.052  Sum_probs=61.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHH
Q ss_conf             88888645767117999999999999999838887621410078646898887999974185643012102363697899
Q gi|254780410|r   44 GAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLT  123 (362)
Q Consensus        44 G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~  123 (362)
                      +..|.|+|-..+..+-..++..    +   ........|++.++|+|.|+..+++.+....   ....+++-+|+++.+.
T Consensus       103 ~~~g~~~TP~~i~~~m~~l~~~----~---~~~~~~~~vlDp~cGsG~~l~~~~~~l~~~~---~~~~~~~g~di~~~~~  172 (344)
T 2f8l_A          103 IQVNHQMTPDSIGFIVAYLLEK----V---IQKKKNVSILDPACGTANLLTTVINQLELKG---DVDVHASGVDVDDLLI  172 (344)
T ss_dssp             CCGGGCCCCHHHHHHHHHHHHH----H---HTTCSEEEEEETTCTTSHHHHHHHHHHHTTS---SCEEEEEEEESCHHHH
T ss_pred             CCCCEECCCHHHHHHHHHHHHH----H---HCCCCCCEEEECCCCCCHHHHHHHHHHHHCC---CCCEEEEEEECCHHHH
T ss_conf             6488137848999999999999----8---3789998899548996689999999987536---7761899998999999


Q ss_pred             HHHHHHHHHCCCCHHCC--CCHHHCC-CCCEEEEEEC
Q ss_conf             99986411102310110--4344445-6956999812
Q gi|254780410|r  124 LIQKKQLASYGDKINWY--TSLADVP-LGFTFLVANE  157 (362)
Q Consensus       124 ~~Q~~~l~~~~~~v~w~--~~l~~~~-~~~~iiiaNE  157 (362)
                      +.-+.++.-+..+..++  +.+...+ ....+|++|=
T Consensus       173 ~~a~~n~~~~~~~~~~~~~d~~~~~~~~~fD~iv~NP  209 (344)
T 2f8l_A          173 SLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL  209 (344)
T ss_dssp             HHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred             HHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999640002221233100110013467767211579


No 20 
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.59  E-value=0.0071  Score=38.25  Aligned_cols=150  Identities=9%  Similarity=0.147  Sum_probs=78.9

Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHCCCCHHHCCCC
Q ss_conf             9983888762141007864689888799997418564301210236369789999986411102-310110434444569
Q gi|254780410|r   71 WEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINWYTSLADVPLG  149 (362)
Q Consensus        71 ~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w~~~l~~~~~~  149 (362)
                      +..++....-.|+|+|+|+|.++..+.+.+.   |    ..+++-+|.|+.+.+.-++++.... .++.++         
T Consensus        30 l~~~~l~~g~~VLDiGcG~G~~~~~la~~~~---~----~~~v~giD~s~~~i~~a~~~~~~~~~~~v~~~---------   93 (219)
T 3dh0_A           30 LKEFGLKEGMTVLDVGTGAGFYLPYLSKMVG---E----KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVL---------   93 (219)
T ss_dssp             HHHHTCCTTCEEEESSCTTCTTHHHHHHHHT---T----TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEE---------
T ss_pred             HHHCCCCCCCEEEEECCCCCHHHHHHHHHCC---C----CEEEEEEEEHHHHHHHHHHHHHHHHCCEEHHH---------
T ss_conf             9865989939999987888877999997508---9----83999985003778899997676402210010---------


Q ss_pred             CEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf             56999812288752358999156646899899607953522576434322346331656841127934789999999976
Q gi|254780410|r  150 FTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRL  229 (362)
Q Consensus       150 ~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l  229 (362)
                          .++  .+.+|+.      ++.+-..+..   .                         .++.-+.....++.+.+.|
T Consensus        94 ----~~d--~~~lp~~------~~sfD~V~~~---~-------------------------~l~~~~d~~~~l~ei~rvL  133 (219)
T 3dh0_A           94 ----KSE--ENKIPLP------DNTVDFIFMA---F-------------------------TFHELSEPLKFLEELKRVA  133 (219)
T ss_dssp             ----ECB--TTBCSSC------SSCEEEEEEE---S-------------------------CGGGCSSHHHHHHHHHHHE
T ss_pred             ----HHH--HHCCCCC------CCCEEEHHHC---C-------------------------HHHHCCCHHHHHHHHHHHC
T ss_conf             ----003--3327755------5542135731---4-------------------------0420779999999999986


Q ss_pred             HHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEE
Q ss_conf             20570599962433685888807764057676700010003453126889999999968983633233
Q gi|254780410|r  230 ACDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTT  297 (362)
Q Consensus       230 ~~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~s  297 (362)
                      + .+|.++++||...... .+           .+.        ....+-..+....+++|++......
T Consensus       134 k-pgG~l~i~d~~~~~~~-~~-----------~~~--------~~~~~~~~~~~~l~~aGf~~~~~~~  180 (219)
T 3dh0_A          134 K-PFAYLAIIDWKKEERD-KG-----------PPP--------EEVYSEWEVGLILEDAGIRVGRVVE  180 (219)
T ss_dssp             E-EEEEEEEEEECSSCCS-SS-----------CCG--------GGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred             C-CCEEEEEEECCCCCCC-CC-----------CCH--------HHCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf             8-3818999988865466-69-----------875--------7658999999999986996988888


No 21 
>1im8_A YECO; methyltransferase, adenosylhomocysteine, structural genomics, hypothetical protein, structure 2 function project, S2F; HET: SAI; 2.20A {Haemophilus influenzae rd KW20} SCOP: c.66.1.14
Probab=96.55  E-value=0.01  Score=37.16  Aligned_cols=83  Identities=20%  Similarity=0.330  Sum_probs=54.3

Q ss_pred             CCCCEEECCCCCHHHHHHHHHH----------HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEE
Q ss_conf             8888645767117999999999----------999999838887621410078646898887999974185643012102
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIF----------LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIY  114 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~----------~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~  114 (362)
                      +-+||.=--.+..+|-..+.+.          +..+.+... +..-+|+|+|.|+|.++.-+++.+.  .    ...+++
T Consensus        16 ~~~~f~F~~~va~~fd~~i~r~iP~Y~~~~~~i~~~~~~~~-~~~~~vLDlGcGtG~~~~~l~~~~~--~----~~~~v~   88 (244)
T 1im8_A           16 KLGDFIFDENVAEVFPDMIQRSVPGYSNIITAIGMLAERFV-TADSNVYDLGCSRGAATLSARRNIN--Q----PNVKII   88 (244)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHC-CTTCEEEEESCTTCHHHHHHHHTCC--C----SSCEEE
T ss_pred             HCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEECCCHHHHHHHHHCC--C----CCCEEE
T ss_conf             14897328527776066887059988999999999999867-9979899920022288999886336--9----980899


Q ss_pred             EEECCHHHHHHHHHHHHHCC
Q ss_conf             36369789999986411102
Q gi|254780410|r  115 MVETSERLTLIQKKQLASYG  134 (362)
Q Consensus       115 ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      -|++|+.+.+.-++++...+
T Consensus        89 giD~S~~ml~~A~~k~~~~~  108 (244)
T 1im8_A           89 GIDNSQPMVERCRQHIAAYH  108 (244)
T ss_dssp             EECSCHHHHHHHHHHHHTSC
T ss_pred             EECCCHHHHHHHHHHHHHCC
T ss_conf             97697899999986443106


No 22 
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, protein structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides 2}
Probab=96.55  E-value=0.0081  Score=37.86  Aligned_cols=79  Identities=13%  Similarity=0.178  Sum_probs=49.4

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC----CHHHCCCCC
Q ss_conf             8887621410078646898887999974185643012102363697899999864111023101104----344445695
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT----SLADVPLGF  150 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~----~l~~~~~~~  150 (362)
                      +.+..-.|+|+|+|+|.++.-+++.          ..+++-++.|+.+.+.-++++...+..+.+..    +++......
T Consensus        42 ~~~pg~~vLdvGcG~G~~~~~l~~~----------g~~v~g~D~S~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~f  111 (261)
T 3iv6_A           42 NIVPGSTVAVIGASTRFLIEKALER----------GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHF  111 (261)
T ss_dssp             TCCTTCEEEEECTTCHHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCC
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCC
T ss_conf             7999997999889788899999967----------998999777899999999974640565330212253233457884


Q ss_pred             EEEEEECCCCCCC
Q ss_conf             6999812288752
Q gi|254780410|r  151 TFLVANEFFDSLP  163 (362)
Q Consensus       151 ~iiiaNE~lDAlP  163 (362)
                      ..|+|+..|..+|
T Consensus       112 D~Vv~~~~~~~~~  124 (261)
T 3iv6_A          112 DFVLNDRLINRFT  124 (261)
T ss_dssp             SEEEEESCGGGSC
T ss_pred             CEEEECCHHHHCC
T ss_conf             6899813787469


No 23 
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.53  E-value=0.016  Score=35.90  Aligned_cols=61  Identities=13%  Similarity=0.073  Sum_probs=41.3

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHH
Q ss_conf             999999838887621410078646898887999974185643012102363697899999864111023101
Q gi|254780410|r   67 LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKIN  138 (362)
Q Consensus        67 ~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~  138 (362)
                      +.++..+ ..|+.-.|+|+|+|.|.++..+.+.          ..+++.++.|+.+.+.-+++......++.
T Consensus        28 l~~~~~~-~~~~~~rVLDiGCG~G~~~~~la~~----------~~~v~g~D~s~~~l~~ak~~~~~~~~~~~   88 (227)
T 1ve3_A           28 LEPLLMK-YMKKRGKVLDLACGVGGFSFLLEDY----------GFEVVGVDISEDMIRKAREYAKSRESNVE   88 (227)
T ss_dssp             HHHHHHH-SCCSCCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCCCE
T ss_pred             HHHHHHH-HCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCCHHHHHHHHHHHHCCCCCC
T ss_conf             9999998-4799897999868888999999965----------99899996750468999998875276533


No 24 
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; NP_988299.1, structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.49  E-value=0.0091  Score=37.48  Aligned_cols=65  Identities=23%  Similarity=0.391  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC--CCCHHCC
Q ss_conf             99999999998388876214100786468988879999741856430121023636978999998641110--2310110
Q gi|254780410|r   63 LAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY--GDKINWY  140 (362)
Q Consensus        63 ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~--~~~v~w~  140 (362)
                      ++.+++   +..+.. +-+|+|+|+|+|.++..+++.         ...+++-++.|+.+.+.-+++++..  ..++.|+
T Consensus        32 ~~~~i~---~~~~~~-~~~VLDiGcG~G~~~~~la~~---------~~~~v~giD~s~~~l~~a~~~~~~~~~~~~i~~~   98 (219)
T 3dlc_A           32 IAENII---NRFGIT-AGTCIDIGSGPGALSIALAKQ---------SDFSIRALDFSKHMNEIALKNIADANLNDRIQIV   98 (219)
T ss_dssp             HHHHHH---HHHCCC-EEEEEEETCTTSHHHHHHHHH---------SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred             HHHHHH---HHCCCC-CCEEEEECCCCCHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEC
T ss_conf             999999---972999-993999627585999999953---------6998999979789999998744421666640001


No 25 
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.46  E-value=0.0064  Score=38.55  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=33.5

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +.-.|+|+|+|+|.++.-+.+.          ..+++-+|.|+.+.+.-+++++
T Consensus        45 ~~~~vLDiGcG~G~~~~~l~~~----------~~~v~gvD~S~~mi~~a~~k~~   88 (220)
T 3hnr_A           45 SFGNVLEFGVGTGNLTNKLLLA----------GRTVYGIEPSREMRMIAKEKLP   88 (220)
T ss_dssp             CCSEEEEECCTTSHHHHHHHHT----------TCEEEEECSCHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHCCC
T ss_conf             9793999728785999999977----------9989999583577899874256


No 26 
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.37  E-value=0.023  Score=34.72  Aligned_cols=89  Identities=20%  Similarity=0.260  Sum_probs=55.0

Q ss_pred             HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHCC-CCHHHC
Q ss_conf             999983888762141007864689888799997418564301210236369789999986411102-310110-434444
Q gi|254780410|r   69 CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINWY-TSLADV  146 (362)
Q Consensus        69 ~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w~-~~l~~~  146 (362)
                      .+.+.++....-.|+|+|.|+|.++.-+.+.+.       ...+++.||.++.+.+.-++++...+ .+|.++ .+..+.
T Consensus        66 ~ml~~L~l~~g~~VLeIGtGtGy~aa~la~~~~-------~~~~V~~iE~~~~l~~~A~~~l~~~g~~nv~~~~gD~~~g  138 (317)
T 1dl5_A           66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVG-------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG  138 (317)
T ss_dssp             HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHC
T ss_conf             999971899999899917976476899988618-------8867999957817899999989973578739998955758


Q ss_pred             -CC-C-CEEEEEECCCCCCCE
Q ss_conf             -56-9-569998122887523
Q gi|254780410|r  147 -PL-G-FTFLVANEFFDSLPI  164 (362)
Q Consensus       147 -~~-~-~~iiiaNE~lDAlPv  164 (362)
                       +. . ...|+++--+..+|-
T Consensus       139 ~~~~~~fD~Iiv~~~~~~ip~  159 (317)
T 1dl5_A          139 VPEFSPYDVIFVTVGVDEVPE  159 (317)
T ss_dssp             CGGGCCEEEEEECSBBSCCCH
T ss_pred             CCCCCCCCEEEECCCHHHHHH
T ss_conf             877899419999687688589


No 27 
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.37  E-value=0.02  Score=35.11  Aligned_cols=61  Identities=13%  Similarity=0.070  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             999999999999999838-88762141007864689888799997418564301210236369789999986
Q gi|254780410|r   58 IFGEMLAIFLICAWEQHG-FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        58 ~Fg~~ia~~~~~~~~~~~-~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      .|...........+..+. .+..-.|+|+|+|+|.++..+.+.          ..+++.+|.|+.+.+.-++
T Consensus        25 ~~~~~~~~~~~~~~~~l~~~~~~~~vLDvGcG~G~~~~~la~~----------g~~v~gvD~S~~~l~~a~~   86 (218)
T 3ou2_A           25 TFVPYMDSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL----------ADRVTALDGSAEMIAEAGR   86 (218)
T ss_dssp             HHHHHHTTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH----------SSEEEEEESCHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHC----------CCEEEEEECCCHHHHHHHH
T ss_conf             8523225789999999736688997999889887899999961----------9989999783178999997


No 28 
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=96.36  E-value=0.0079  Score=37.93  Aligned_cols=53  Identities=15%  Similarity=0.254  Sum_probs=39.8

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC
Q ss_conf             762141007864689888799997418564301210236369789999986411102310110
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY  140 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~  140 (362)
                      +.-.|+|+|+|.|.++..+.+.          ..+++-+|+|+.+.+.-+++++..+.+|.+.
T Consensus        39 ~~~~vLDiGcG~G~~t~~la~~----------~~~V~gvD~S~~~l~~a~~r~~~~~~~v~~~   91 (263)
T 2yqz_A           39 EEPVFLELGVGTGRIALPLIAR----------GYRYIALDADAAMLEVFRQKIAGVDRKVQVV   91 (263)
T ss_dssp             SCCEEEEETCTTSTTHHHHHTT----------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHCCCCCCCCHHH
T ss_conf             9998999517886999999966----------9989999898999999874021011441022


No 29 
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.36  E-value=0.013  Score=36.44  Aligned_cols=56  Identities=11%  Similarity=0.095  Sum_probs=38.9

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   68 ICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        68 ~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .-+.+.++..+.-.|+|+|.|+|.++..+.+    ..      .+++-||.|+.+.+.-+++....
T Consensus        11 ~~l~~~~~~~pg~rVLDiGCGtG~~~~~la~----~~------~~v~gvD~S~~ml~~A~~~~~~~   66 (239)
T 1xxl_A           11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSP----YV------QECIGVDATKEMVEVASSFAQEK   66 (239)
T ss_dssp             HHHHHHHTCCTTCEEEEESCTTSHHHHHHGG----GS------SEEEEEESCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCEEEEECCCCCHHHHHHHH----CC------CEEEEEECCHHHHHHHHHHHHHC
T ss_conf             9999985899989899958868599999997----09------97999979999999999865430


No 30 
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.35  E-value=0.028  Score=34.13  Aligned_cols=160  Identities=16%  Similarity=0.087  Sum_probs=84.7

Q ss_pred             HCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCCCCHHHCCCCC
Q ss_conf             83888762141007864689888799997418564301210236369789999986411102--3101104344445695
Q gi|254780410|r   73 QHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWYTSLADVPLGF  150 (362)
Q Consensus        73 ~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~~~l~~~~~~~  150 (362)
                      ..+.+..-.|+|+|.|.|.++.-+.+..         ..+++-|++|+.+.+.-+++....+  ++|.            
T Consensus        77 ~~~l~~~~~VLDiGCG~G~~~~~la~~~---------g~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~------------  135 (297)
T 2o57_A           77 TGVLQRQAKGLDLGAGYGGAARFLVRKF---------GVSIDCLNIAPVQNKRNEEYNNQAGLADNIT------------  135 (297)
T ss_dssp             TTCCCTTCEEEEETCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEE------------
T ss_pred             HCCCCCCCEEEEECCCCCHHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHHHCCCCCCCE------------
T ss_conf             4698999989998899998999999963---------9859999674277888876443205676622------------


Q ss_pred             EEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf             69998122887523589991566468998996079535225764343223463316568411279347899999999762
Q gi|254780410|r  151 TFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLA  230 (362)
Q Consensus       151 ~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~  230 (362)
                       ++.++  +..+|+.      ++-+-..+..                            ..++.-+....++..+.+.|+
T Consensus       136 -~~~~d--~~~l~~~------~~~fD~V~~~----------------------------~~l~h~~d~~~~l~~~~r~Lk  178 (297)
T 2o57_A          136 -VKYGS--FLEIPCE------DNSYDFIWSQ----------------------------DAFLHSPDKLKVFQECARVLK  178 (297)
T ss_dssp             -EEECC--TTSCSSC------TTCEEEEEEE----------------------------SCGGGCSCHHHHHHHHHHHEE
T ss_pred             -EEECC--CCCCCCC------CCCEEEEEEC----------------------------CCHHHCCCHHHHHHHHHHHCC
T ss_conf             -78612--2256766------6511099985----------------------------724423799999999999719


Q ss_pred             HCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEEHHHHH
Q ss_conf             057059996243368588880776405767670001000345312688999999996898363323389999
Q gi|254780410|r  231 CDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLTTQGKFL  302 (362)
Q Consensus       231 ~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~sQ~~FL  302 (362)
                      . +|.+++.|+..........+..        .+....   +...-..+.+.+.++++|++.+......+.+
T Consensus       179 p-GG~l~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~~s~~~~~~~l~~~Gf~~i~~~d~~~~~  238 (297)
T 2o57_A          179 P-RGVMAITDPMKEDGIDKSSIQP--------ILDRIK---LHDMGSLGLYRSLAKECGLVTLRTFSRPDSL  238 (297)
T ss_dssp             E-EEEEEEEEEEECTTCCGGGGHH--------HHHHHT---CSSCCCHHHHHHHHHHTTEEEEEEEECHHHH
T ss_pred             C-CCEEEEEECCCCCCCCHHHHHH--------HHHHHC---CCCCCCHHHHHHHHHHCCCEEEEEEECCHHH
T ss_conf             8-8189999844778987667899--------998741---5899999999999998799899999881789


No 31 
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.35  E-value=0.0043  Score=39.69  Aligned_cols=84  Identities=19%  Similarity=0.145  Sum_probs=49.2

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHC
Q ss_conf             9999983888762141007864689888799997418564301210236369789999986411102310110-434444
Q gi|254780410|r   68 ICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADV  146 (362)
Q Consensus        68 ~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~  146 (362)
                      .++...+....+-.|+|+|.|+|.++..+.+..    |    .-+++-||+|+.+.+.-++++++    +.+. -+..+.
T Consensus        23 ~~ll~~~~~~~~~rVLDiGCGtG~~t~~la~~~----~----~~~v~gvD~S~~ml~~A~~~~~~----v~~~~~d~~~~   90 (259)
T 2p35_A           23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY----G----VNVITGIDSDDDMLEKAADRLPN----TNFGKADLATW   90 (259)
T ss_dssp             HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH----C----TTSEEEEESCHHHHHHHHHHSTT----SEEEECCTTTC
T ss_pred             HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHCCC----CCCEEEEHHHC
T ss_conf             999952888898989998162869999999878----9----98799998987999999972566----31201424212


Q ss_pred             C--CCCEEEEEECCCCCCC
Q ss_conf             5--6956999812288752
Q gi|254780410|r  147 P--LGFTFLVANEFFDSLP  163 (362)
Q Consensus       147 ~--~~~~iiiaNE~lDAlP  163 (362)
                      +  .....|+||..+--+|
T Consensus        91 ~~~~~fD~V~s~~~l~~~~  109 (259)
T 2p35_A           91 KPAQKADLLYANAVFQWVP  109 (259)
T ss_dssp             CCSSCEEEEEEESCGGGST
T ss_pred             CCCCCCCEECCCCEEEECC
T ss_conf             4354555641201577468


No 32 
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.34  E-value=0.011  Score=36.84  Aligned_cols=81  Identities=16%  Similarity=0.137  Sum_probs=49.3

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHCC--CCC
Q ss_conf             3888762141007864689888799997418564301210236369789999986411102310110-4344445--695
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADVP--LGF  150 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~~--~~~  150 (362)
                      ...+++..|+|+|.|+|.++.-+.+    .      ..+++-||.|+...+.-+++......++.+. .++.+.+  ...
T Consensus       116 ~~~~~~~~vLDiGcG~G~~~~~la~----~------g~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f  185 (286)
T 3m70_A          116 AKIISPCKVLDLGCGQGRNSLYLSL----L------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENY  185 (286)
T ss_dssp             HHHSCSCEEEEESCTTCHHHHHHHH----T------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCE
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHH----C------CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCC
T ss_conf             8889969799983779899999985----8------99799998988999999986542266202444002211013567


Q ss_pred             EEEEEECCCCCCCE
Q ss_conf             69998122887523
Q gi|254780410|r  151 TFLVANEFFDSLPI  164 (362)
Q Consensus       151 ~iiiaNE~lDAlPv  164 (362)
                      .+|+|+.+|..+|-
T Consensus       186 D~I~~~~~l~~l~~  199 (286)
T 3m70_A          186 DFIVSTVVFMFLNR  199 (286)
T ss_dssp             EEEEECSSGGGSCG
T ss_pred             CEEEEEEEEECCCH
T ss_conf             57878607763887


No 33 
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.28  E-value=0.011  Score=36.90  Aligned_cols=49  Identities=20%  Similarity=0.232  Sum_probs=36.6

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             8876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .+..-.|+|+|+|.|.++..+|..   .      ..+++.||.|+.+.+.-++++...
T Consensus        77 ~~~~~~vLDiGcG~G~~~~~ll~~---~------~~~v~~vD~s~~~l~~ar~~~~~~  125 (241)
T 2ex4_A           77 KTGTSCALDCGAGIGRITKRLLLP---L------FREVDMVDITEDFLVQAKTYLGEE  125 (241)
T ss_dssp             CCCCSEEEEETCTTTHHHHHTTTT---T------CSEEEEEESCHHHHHHHHHHTGGG
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHC---C------CCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             778876999015707869999970---5------998999999999999999877650


No 34 
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.24  E-value=0.027  Score=34.29  Aligned_cols=66  Identities=20%  Similarity=0.184  Sum_probs=44.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             76711799999999999999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|.-.+.|.+.|+.        +..+.+-.|+|+|+|+|.++..+.+..   .|    .-+++-|++|+.+.+.-+++..
T Consensus        18 rp~y~~~~~~~l~~--------~~~~~~~~VLDiGCGtG~~t~~la~~~---~~----~~~V~gvD~S~~mi~~a~~~~~   82 (299)
T 3g5t_A           18 RPSYPSDFYKMIDE--------YHDGERKLLVDVGCGPGTATLQMAQEL---KP----FEQIIGSDLSATMIKTAEVIKE   82 (299)
T ss_dssp             SCCCCHHHHHHHHH--------HCCSCCSEEEEETCTTTHHHHHHHHHS---SC----CSEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH--------CCCCCCCEEEEECCCCCHHHHHHHHHC---CC----CCEEEEEECCHHHHHHHHHHHH
T ss_conf             89841999999995--------177899969998260889999999964---99----9879998598899999999998


Q ss_pred             H
Q ss_conf             1
Q gi|254780410|r  132 S  132 (362)
Q Consensus       132 ~  132 (362)
                      .
T Consensus        83 ~   83 (299)
T 3g5t_A           83 G   83 (299)
T ss_dssp             H
T ss_pred             H
T ss_conf             6


No 35 
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.23  E-value=0.073  Score=31.33  Aligned_cols=224  Identities=13%  Similarity=0.184  Sum_probs=104.2

Q ss_pred             HCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH---CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCH
Q ss_conf             108987864689888888886457671179999999999999998---38887621410078646898887999974185
Q gi|254780410|r   29 VADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQ---HGFPSCVRLVELGPGRGIMMLDILRVICKLKP  105 (362)
Q Consensus        29 Ly~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~---~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p  105 (362)
                      .+.|+.+||+++..-        +| +. .|---+-..+++.+-.   ...+.+..|+++|.|+|.   |+.++++.   
T Consensus         6 ~~~~~~~y~~~~~~~--------~~-lr-~~~N~vK~~lI~~~~~~~~~~~~~~~~VLDlgcG~Gg---Dl~K~~~~---   69 (302)
T 2vdw_A            6 RLNPEVSYFTNKRTR--------GP-LG-ILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGA---DLEKYFYG---   69 (302)
T ss_dssp             CSSTTCCCBCSSCCC--------HH-HH-HHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTT---THHHHHHT---
T ss_pred             HCCCCCCCCCCCCCC--------CC-HH-HCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECH---HHHHHHHC---
T ss_conf             308654311036656--------86-36-4061889999999987750268889979999500045---27999966---


Q ss_pred             HHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECC
Q ss_conf             64301210236369789999986411102310110434444569569998122887523589991566468998996079
Q gi|254780410|r  106 DFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHD  185 (362)
Q Consensus       106 ~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~  185 (362)
                         ..-.|+-|++|+...+.-++|..+...+...        ....+.+.-|++.+-..      ...+.+.    ..++
T Consensus        70 ---~~~~vvGiDiS~~~I~~A~~R~~~~~~~~~~--------~~~~~~~~~~~~~~d~~------~~~~~~~----~~~~  128 (302)
T 2vdw_A           70 ---EIALLVATDPDADAIARGNERYNKLNSGIKT--------KYYKFDYIQETIRSDTF------VSSVREV----FYFG  128 (302)
T ss_dssp             ---TCSEEEEEESCHHHHHHHHHHHHHHCC------------CCCEEEEEECCTTSSSH------HHHHHTT----CCSS
T ss_pred             ---CCCEEEEEECCHHHHHHHHHHHHHHCCCCCC--------CHHCCCCHHHHHHCCHH------HHHHHHH----CCCC
T ss_conf             ---9988999979899999999999972124331--------00013305999861132------4445530----4789


Q ss_pred             CEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECC-C-CCCCCCCC-EEE--E-EC---
Q ss_conf             53522576434322346331656841127934789999999976205705999624-3-36858888-077--6-40---
Q gi|254780410|r  186 SLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACDGGTAIVIDY-G-YLQSRVGD-TLQ--A-VK---  256 (362)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L~iDY-G-y~~~r~~g-TLr--~-y~---  256 (362)
                      .+           ....+ .+.--+..+- ......++.+++.|+. +|.++.--+ | ........ .-.  . +.   
T Consensus       129 ~F-----------DvVs~-qfalHy~f~~-~~~~~~l~ni~~~Lkp-gG~fi~t~~~~~~i~~~l~~~~~~~~~~~~~~~  194 (302)
T 2vdw_A          129 KF-----------NIIDW-QFAIHYSFHP-RHYATVMNNLSELTAS-GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSE  194 (302)
T ss_dssp             CE-----------EEEEE-ESCGGGTCST-TTHHHHHHHHHHHEEE-EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTT
T ss_pred             CE-----------EEEEE-CCHHHHHCCC-HHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHHHHCCCCCCEEEECCC
T ss_conf             75-----------69998-1406560885-8999999999961389-968999980699999998725777501222244


Q ss_pred             ---------CCCCCCC-CCCCCCCCCC-CCCCHHHHHHHHHHCCCEEECCEEHHHHHHH
Q ss_conf             ---------5767670-0010003453-1268899999999689836332338999997
Q gi|254780410|r  257 ---------GHTYVSP-LVNPGQADLS-SHVDFQRLSSIAILYKLYINGLTTQGKFLEG  304 (362)
Q Consensus       257 ---------~H~~~dp-l~~pG~~DIT-ahVnFs~L~~~a~~~g~~~~g~~sQ~~FL~~  304 (362)
                               ..+.... +...+ .+++ +-|+|+.|.+.+++.|++.+...+..+|+..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~-~~~~EyLV~~~~l~~l~~~~gl~lv~~~~F~~~~~~  252 (302)
T 2vdw_A          195 NYMSVEKIADDRIVVYNPSTMS-TPMTEYIIKKNDIVRVFNEYGFVLVDNVDFATIIER  252 (302)
T ss_dssp             SEEEECEEETTEEEEBCTTTBS-SCEEEECCCHHHHHHHHHHTTEEEEEEEEHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEEECCCC-CCCHHHCCCHHHHHHHHHHCCCEEEEECCHHHHHHH
T ss_conf             4334667899878999834456-754654327999999999859899980687999987


No 36 
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.21  E-value=0.037  Score=33.34  Aligned_cols=75  Identities=17%  Similarity=0.269  Sum_probs=47.8

Q ss_pred             CEEECCCC--CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             86457671--1799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   48 DFVTAPEI--SQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        48 DF~Tsp~i--s~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      ||...|.+  =.---|++..+....   . ...+..++|+|.|+|.++..+...    .|+    .+++.+|+|+...+.
T Consensus        81 ~f~v~~~vlIPRpeTE~lv~~~l~~---~-~~~~~~ilDlgtGsG~I~i~la~~----~p~----~~v~a~Dis~~Al~~  148 (276)
T 2b3t_A           81 PLFVSPATLIPRPDTECLVEQALAR---L-PEQPCRILDLGTGTGAIALALASE----RPD----CEIIAVDRMPDAVSL  148 (276)
T ss_dssp             EEECCTTSCCCCTTHHHHHHHHHHH---S-CSSCCEEEEETCTTSHHHHHHHHH----CTT----SEEEEECSSHHHHHH
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHH---C-CCCCCEEEEECCCCHHHHHHHHHH----CCC----CEEEEECCCHHHHHH
T ss_conf             7875887706997699999999875---1-457861764146532999999986----898----758864176688999


Q ss_pred             HHHHHHHCC
Q ss_conf             986411102
Q gi|254780410|r  126 QKKQLASYG  134 (362)
Q Consensus       126 Q~~~l~~~~  134 (362)
                      -+++...++
T Consensus       149 A~~Na~~~~  157 (276)
T 2b3t_A          149 AQRNAQHLA  157 (276)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHCC
T ss_conf             999999749


No 37 
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase, structural genomics; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.16  E-value=0.0031  Score=40.66  Aligned_cols=47  Identities=11%  Similarity=0.147  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .....-.|+|+|+|.|.++..+.+.          -.+++-||.|+.+.+.-+++++
T Consensus        54 ~~~~g~~VLDiGcG~G~~~~~la~~----------~~~v~giD~s~~ml~~a~~~~~  100 (279)
T 3ccf_A           54 NPQPGEFILDLGCGTGQLTEKIAQS----------GAEVLGTDNAATMIEKARQNYP  100 (279)
T ss_dssp             CCCTTCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHCT
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECHHHHHHHHHHHCC
T ss_conf             9999699999358585999999964----------9989999163889999986165


No 38 
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.16  E-value=0.05  Score=32.44  Aligned_cols=63  Identities=17%  Similarity=0.329  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             999999999999983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   60 GEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        60 g~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      -|++..++...+....   ...|+++|.|+|..+..+.+.     |+    .+++.+|+|+...+.-+++...++
T Consensus       108 TE~Lve~~~~~~~~~~---~~~vlDlgtGSG~I~isla~~-----p~----~~V~avDiS~~Al~vA~~Na~~~~  170 (284)
T 1nv8_A          108 TEELVELALELIRKYG---IKTVADIGTGSGAIGVSVAKF-----SD----AIVFATDVSSKAVEIARKNAERHG  170 (284)
T ss_dssp             HHHHHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHH-----SS----CEEEEEESCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCC---CCEEEEEECCHHHHHHHHHHH-----HC----CCEEEECCCHHHHHHHHHHHHHCC
T ss_conf             8999998887650378---867998604605988767652-----01----451676397999999999998448


No 39 
>1vl5_A Unknown conserved protein BH2331; 10174951, hypothetical protein, structural genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.95A {Bacillus halodurans c-125} SCOP: c.66.1.41
Probab=96.12  E-value=0.017  Score=35.57  Aligned_cols=54  Identities=6%  Similarity=0.118  Sum_probs=38.5

Q ss_pred             HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             9998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   70 AWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        70 ~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +.+.++....-.|+|+|+|.|.++..+.+.    .      -+++-+|.|+.+.+..+++++..
T Consensus        29 l~~~~~l~~~~~VLDiGcG~G~~~~~la~~----~------~~v~g~D~s~~~~~~a~~~~~~~   82 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATGGGHVANAFAPF----V------KKVVAFDLTEDILKVARAFIEGN   82 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCTTCHHHHHHGGG----S------SEEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHH----C------CEEEEEECCHHHHHHHHHCCCCC
T ss_conf             999608999299999546471999999972----9------96999989999999866122224


No 40 
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.04  E-value=0.046  Score=32.70  Aligned_cols=41  Identities=17%  Similarity=0.267  Sum_probs=31.8

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             141007864689888799997418564301210236369789999986411
Q gi|254780410|r   81 RLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        81 ~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|+|+|.|+|.++..+.+.          -.+++-+|+|+.+.+.-+++.+
T Consensus        44 rVLDiGcG~G~~~~~la~~----------g~~v~gvD~S~~~l~~ar~~~~   84 (203)
T 3h2b_A           44 VILDVGSGTGRWTGHLASL----------GHQIEGLEPATRLVELARQTHP   84 (203)
T ss_dssp             CEEEETCTTCHHHHHHHHT----------TCCEEEECCCHHHHHHHHHHCT
T ss_pred             CEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHCCC
T ss_conf             4999737887999999977----------9969999697889999974488


No 41 
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1, methyltransferase domain, structural genomics; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.98  E-value=0.013  Score=36.55  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=45.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC-CHHHCC--CC-CEEEE
Q ss_conf             621410078646898887999974185643012102363697899999864111023101104-344445--69-56999
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT-SLADVP--LG-FTFLV  154 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~-~l~~~~--~~-~~iii  154 (362)
                      +-.|+|+|.|+|.++..++..         ...+++-+|.|+.+.+.-+++..+...++.++. +..++|  ++ ..+|+
T Consensus        24 ~~~VLDiGcG~G~~~~~~~~~---------~~~~v~gvD~S~~~i~~a~~~~~~~~~~v~~~~~d~~~l~~~~~sfD~I~   94 (209)
T 2p8j_A           24 DKTVLDCGAGGDLPPLSIFVE---------DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVY   94 (209)
T ss_dssp             CSEEEEESCCSSSCTHHHHHH---------TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEE
T ss_pred             CCEEEEEECCCCHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCHHH
T ss_conf             898999727889999999985---------89989999597999999986220357436530020223685434233888


Q ss_pred             EECCCCCCC
Q ss_conf             812288752
Q gi|254780410|r  155 ANEFFDSLP  163 (362)
Q Consensus       155 aNE~lDAlP  163 (362)
                      |+..+-.+|
T Consensus        95 s~~~l~h~~  103 (209)
T 2p8j_A           95 SYGTIFHMR  103 (209)
T ss_dssp             ECSCGGGSC
T ss_pred             HHHHHHCCC
T ss_conf             766787288


No 42 
>3cc8_A Putative methyltransferase; NP_977653.1, structural genomics, joint center for structural genomics, JCSG; 1.64A {Bacillus cereus atcc 10987}
Probab=95.95  E-value=0.012  Score=36.56  Aligned_cols=42  Identities=12%  Similarity=0.098  Sum_probs=30.3

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             7621410078646898887999974185643012102363697899999864
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                      ..-+|+|+|.|+|.++..+.    +.      ..+++-||+|+...+.-+++
T Consensus        32 ~~~~ILDIGcG~G~~~~~l~----~~------~~~v~giD~s~~~i~~a~~~   73 (230)
T 3cc8_A           32 EWKEVLDIGCSSGALGAAIK----EN------GTRVSGIEAFPEAAEQAKEK   73 (230)
T ss_dssp             TCSEEEEETCTTSHHHHHHH----TT------TCEEEEEESSHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCHHHHHHH----HC------CCEEEEEECCHHHHHHHHHC
T ss_conf             79969995188869999999----75------99899996725666665411


No 43 
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.90  E-value=0.036  Score=33.40  Aligned_cols=54  Identities=17%  Similarity=0.264  Sum_probs=38.5

Q ss_pred             HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             99983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   70 AWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        70 ~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +.+....|..-.|+|+|+|.|.++..+.+.    .|+    .+++-||.|+.+.+.-++...
T Consensus        29 ~~~~~~~~pg~rVLDiGcG~G~~~~~la~~----~~~----~~v~gvD~s~~~~~~a~~~~~   82 (276)
T 3mgg_A           29 LHHDTVYPPGAKVLEAGCGIGAQTVILAKN----NPD----AEITSIDISPESLEKARENTE   82 (276)
T ss_dssp             HHTTCCCCTTCEEEETTCTTSHHHHHHHHH----CTT----SEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCCEEEEECCCCCHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHHHH
T ss_conf             875569999998999558588999999987----999----789999795676322221122


No 44 
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.83  E-value=0.013  Score=36.52  Aligned_cols=118  Identities=16%  Similarity=0.208  Sum_probs=70.3

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHCC--C-CCEE
Q ss_conf             8762141007864689888799997418564301210236369789999986411102310110-4344445--6-9569
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADVP--L-GFTF  152 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~~--~-~~~i  152 (362)
                      +..-.|+|+|.|+|.++..+.+.      .   ..+++-|+.|+...+.-+++..+. .+++|. .+..++|  + ...+
T Consensus        41 ~~~~~iLDiGCG~G~~~~~L~~~------g---~~~v~giD~s~~~i~~~~~~~~~~-~~~~~~~~D~~~l~~~~~sFD~  110 (215)
T 2pxx_A           41 RPEDRILVLGCGNSALSYELFLG------G---FPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLDFPSASFDV  110 (215)
T ss_dssp             CTTCCEEEETCTTCSHHHHHHHT------T---CCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCCSCSSCEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC------C---CCEEEEEECCHHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCEEE
T ss_conf             99998999637777999999984------8---983999827625667999983478-6354321454457789997789


Q ss_pred             EEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHC
Q ss_conf             99812288752358999156646899899607953522576434322346331656841127934789999999976205
Q gi|254780410|r  153 LVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACD  232 (362)
Q Consensus       153 iiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~  232 (362)
                      |+++..||++.+..                 ..                     ......+........+..+.+.|+. 
T Consensus       111 Vi~~~~ld~i~~~~-----------------~~---------------------~~~~~~~~~~~~~~~l~e~~r~Lkp-  151 (215)
T 2pxx_A          111 VLEKGTLDALLAGE-----------------RD---------------------PWTVSSEGVHTVDQVLSEVSRVLVP-  151 (215)
T ss_dssp             EEEESHHHHHTTTC-----------------SC---------------------TTSCCHHHHHHHHHHHHHHHHHEEE-
T ss_pred             EEECCCHHHEECCC-----------------CC---------------------CCCCCCCCHHHHHHHHHHHHHHCCC-
T ss_conf             99997454301243-----------------32---------------------2111001243199999999987735-


Q ss_pred             CEEEEEECCCC
Q ss_conf             70599962433
Q gi|254780410|r  233 GGTAIVIDYGY  243 (362)
Q Consensus       233 ~G~~L~iDYGy  243 (362)
                      +|.++++.|+.
T Consensus       152 gG~~i~~~~~~  162 (215)
T 2pxx_A          152 GGRFISMTSAA  162 (215)
T ss_dssp             EEEEEEEESCC
T ss_pred             CCEEEEEECCC
T ss_conf             87899995698


No 45 
>2i6g_A Putative methyltransferase; 16420133, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MLY; 1.90A {Salmonella typhimurium LT2} SCOP: c.66.1.44
Probab=95.82  E-value=0.042  Score=32.93  Aligned_cols=50  Identities=14%  Similarity=0.050  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +...++..|+|+|+|+|.++.-+.+.          -.+++-+|.|+...+.-+++.+..
T Consensus        27 ~~~l~pgrVLDiGcG~G~~~~~la~~----------g~~v~gvD~s~~~l~~a~~~~~~~   76 (199)
T 2i6g_A           27 AXVVAPGRTLDLGCGNGRNSLYLAAN----------GYDVTAWDXNPASMANLERIXAAE   76 (199)
T ss_dssp             HTTSCSCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             HCCCCCCCEEEECCCCCHHHHHHHHC----------CCEEEEEECCCHHHHHHHHHHHHC
T ss_conf             43789896899858897899999854----------998999958718999999864213


No 46 
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Lactobacillus delbrueckii subsp}
Probab=95.80  E-value=0.035  Score=33.46  Aligned_cols=95  Identities=24%  Similarity=0.317  Sum_probs=53.2

Q ss_pred             CHHHHH---HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             179999---99999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   56 SQIFGE---MLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        56 s~~Fg~---~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +..||.   --.+-+++.+..... .+-.|+|+|.|+|.++.-+.+    ..     .-+++.++.|+...+.-+++...
T Consensus        36 ~~aFGtG~H~tT~l~l~~L~~~~~-~~~~VLDlGcGsG~~~~~~ak----~g-----~~~V~~iDis~~al~~A~~N~~~  105 (205)
T 3grz_A           36 GLAFGTGNHQTTQLAMLGIERAMV-KPLTVADVGTGSGILAIAAHK----LG-----AKSVLATDISDESMTAAEENAAL  105 (205)
T ss_dssp             C-----CCHHHHHHHHHHHHHHCS-SCCEEEEETCTTSHHHHHHHH----TT-----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHH----CC-----CCEEEEEECCHHHHHHHHHHHHH
T ss_conf             446679988899999999983479-959999995262299999987----59-----96899998989999999999997


Q ss_pred             CCC-CHHCC-CC-HHHCCCCCEEEEEECCCC
Q ss_conf             023-10110-43-444456956999812288
Q gi|254780410|r  133 YGD-KINWY-TS-LADVPLGFTFLVANEFFD  160 (362)
Q Consensus       133 ~~~-~v~w~-~~-l~~~~~~~~iiiaNE~lD  160 (362)
                      ... .+... .+ +........+|+||..++
T Consensus       106 n~~~~~~~~~~~~~~~~~~~fD~Ivani~~~  136 (205)
T 3grz_A          106 NGIYDIALQKTSLLADVDGKFDLIVANILAE  136 (205)
T ss_dssp             TTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred             CCCCCEEEEECCHHHCCCCCCCEEEECCCHH
T ss_conf             3766768873434440455568999858788


No 47 
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.79  E-value=0.027  Score=34.24  Aligned_cols=74  Identities=18%  Similarity=0.192  Sum_probs=46.7

Q ss_pred             CCCCCEEECCCCCHHHHH----HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf             888886457671179999----9999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r   44 GAVGDFVTAPEISQIFGE----MLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS  119 (362)
Q Consensus        44 G~~GDF~Tsp~is~~Fg~----~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s  119 (362)
                      |+.-.|.|.|-+   ||.    .-++.+++   .+..+..-.|+|+|+|+|.++..+.+    ..      -+++.+|.|
T Consensus        20 g~~~~~~~~~gv---f~~~~~d~~t~~Ll~---~l~~~~~~~vLDiGcG~G~~~~~la~----~~------~~v~~iDis   83 (194)
T 1dus_A           20 GKKLKFKTDSGV---FSYGKVDKGTKILVE---NVVVDKDDDILDLGCGYGVIGIALAD----EV------KSTTMADIN   83 (194)
T ss_dssp             TEEEEEEEETTS---TTTTSCCHHHHHHHH---HCCCCTTCEEEEETCTTSHHHHHHGG----GS------SEEEEEESC
T ss_pred             CEEEEEECCCCC---CCCCCCCHHHHHHHH---HCCCCCCCEEEEECCCCCHHHHHHHH----HC------CEEEEEECC
T ss_conf             907999748987---689986999999998---28988999499956964299999997----38------847998263


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             78999998641110
Q gi|254780410|r  120 ERLTLIQKKQLASY  133 (362)
Q Consensus       120 ~~l~~~Q~~~l~~~  133 (362)
                      +...+.-+++....
T Consensus        84 ~~~i~~a~~n~~~~   97 (194)
T 1dus_A           84 RRAIKLAKENIKLN   97 (194)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             67889999999981


No 48 
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural genomics consortium, SGC; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=95.78  E-value=0.058  Score=32.00  Aligned_cols=57  Identities=16%  Similarity=0.159  Sum_probs=42.9

Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             9983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   71 WEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        71 ~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      ...++....-.|+|+|.|+|.|+..+.+.+.   |    .-.++-+|.++...+.-++++..+.
T Consensus        98 l~~l~I~PG~rVLE~GtGsG~lt~~LAr~vg---p----~G~V~~~D~~~~~~~~Ar~n~~~~~  154 (336)
T 2b25_A           98 LSMMDINPGDTVLEAGSGSGGMSLFLSKAVG---S----QGRVISFEVRKDHHDLAKKNYKHWR  154 (336)
T ss_dssp             HHHHTCCTTCEEEEECCTTSHHHHHHHHHHC---T----TCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCEEEECCCCCCHHHHHHHHHHC---C----CCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf             9985899998899835377799999999628---9----8489984399999999999999743


No 49 
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.78  E-value=0.071  Score=31.39  Aligned_cols=136  Identities=19%  Similarity=0.316  Sum_probs=72.5

Q ss_pred             HHHHHHHHCCCCCHHH---HHHH---HHCCCCCCC----CCCC-CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9999998189804999---9998---710898786----4689-888888886457671179999999999999998388
Q gi|254780410|r    8 KIVNLIKKNGQMTVDQ---YFAL---CVADPEFGY----YSTC-NPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGF   76 (362)
Q Consensus         8 ~i~~~I~~~G~i~f~~---fM~~---aLy~p~~GY----Y~~~-~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~   76 (362)
                      ++.+.++..|.|.=.+   =|+.   -++=|+ .|    |.-. -++| .|-++++|++.           ..+.+.++.
T Consensus        23 ~lv~~l~~~g~i~~~~v~~a~~~VpRe~Fvp~-~~~~~AY~D~~l~i~-~~~~is~P~~~-----------A~ml~~L~l   89 (235)
T 1jg1_A           23 RTVEMLKAEGIIRSKEVERAFLKYPRYLSVED-KYKKYAHIDEPLPIP-AGQTVSAPHMV-----------AIMLEIANL   89 (235)
T ss_dssp             HHHHHHHHTTSCCSHHHHHHHHHSCGGGGSCG-GGGGGTTSSSCEECS-TTCEECCHHHH-----------HHHHHHHTC
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHCCCHHHCCCH-HHHHCCCCCCCCCCC-CCCEECHHHHH-----------HHHHHHCCC
T ss_conf             99999998599899999999973996443995-677458579983578-99897668999-----------999997048


Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHCCC-CHHH-CCC-C-CE
Q ss_conf             8762141007864689888799997418564301210236369789999986411102-3101104-3444-456-9-56
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINWYT-SLAD-VPL-G-FT  151 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w~~-~l~~-~~~-~-~~  151 (362)
                      ...-.|+|+|+|+|.++.-+-+ +..        -+.+.||.++.+.+.-++++...+ .+|..+. +..+ .+. . ..
T Consensus        90 ~~g~~VLeIGsGtGy~ta~la~-l~g--------~~V~~IE~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~~fD  160 (235)
T 1jg1_A           90 KPGMNILEVGTGSGWNAALISE-IVK--------TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD  160 (235)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHH-HHC--------SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHH-HCC--------CEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf             9998799947887678999998-649--------7399996288999999999998099716999887001666557634


Q ss_pred             EEEEECCCCCCCEE
Q ss_conf             99981228875235
Q gi|254780410|r  152 FLVANEFFDSLPIK  165 (362)
Q Consensus       152 iiiaNE~lDAlPv~  165 (362)
                      .|+.+--.+.+|-.
T Consensus       161 ~I~v~~a~~~ip~~  174 (235)
T 1jg1_A          161 VIIVTAGAPKIPEP  174 (235)
T ss_dssp             EEEECSBBSSCCHH
T ss_pred             EEEEECCHHHCCHH
T ss_conf             36761465543499


No 50 
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron}
Probab=95.77  E-value=0.048  Score=32.56  Aligned_cols=56  Identities=13%  Similarity=0.120  Sum_probs=40.2

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC--CCCHHCC
Q ss_conf             8876214100786468988879999741856430121023636978999998641110--2310110
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY--GDKINWY  140 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~--~~~v~w~  140 (362)
                      .+..-.|+|+|.|+|.++..+.+.         ...+++-|++|+.+.+.-+++..+.  .++|.|+
T Consensus        44 l~~~~rVLDlGCG~G~~~~~La~~---------~~~~v~gvD~S~~ml~~a~~~~~~~~~~~~v~~~  101 (257)
T 3f4k_A           44 LTDDAKIADIGCGTGGQTLFLADY---------VKGQITGIDLFPDFIEIFNENAVKANCADRVKGI  101 (257)
T ss_dssp             CCTTCEEEEETCTTSHHHHHHHHH---------CCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf             999797999717797999999986---------6997999968456778889877643210000111


No 51 
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA; HET: SAH; 2.60A {Thermus thermophilus HB8}
Probab=95.72  E-value=0.078  Score=31.11  Aligned_cols=60  Identities=22%  Similarity=0.249  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             9999999999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   58 IFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        58 ~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      -.|..+..+..+..+.+- |....|+|+|.|.|.++.-+        +    ...++-+|+|+.+.+.-+++.
T Consensus        17 ~~g~~~~~~~~~~~~~~l-~~g~~iLDiGCG~G~~~~~l--------~----~~~v~g~D~s~~~l~~A~~~~   76 (211)
T 2gs9_A           17 PLGAYVIAEEERALKGLL-PPGESLLEVGAGTGYWLRRL--------P----YPQKVGVEPSEAMLAVGRRRA   76 (211)
T ss_dssp             HHHHHHHHHHHHHHHTTC-CCCSEEEEETCTTCHHHHHC--------C----CSEEEEECCCHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHHC-CCCCEEEEECCCCHHHHHHC--------C----CCCEEEEECCHHHHHHHHHCC
T ss_conf             755789999999999857-99998999899860999973--------7----686899838999999876336


No 52 
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.64  E-value=0.11  Score=30.00  Aligned_cols=105  Identities=15%  Similarity=0.216  Sum_probs=58.7

Q ss_pred             HHHHHHCCCCCHH---HHHHH---HHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHC--CCCCCCE
Q ss_conf             9999818980499---99998---71089878646898888888864576711799999999999999983--8887621
Q gi|254780410|r   10 VNLIKKNGQMTVD---QYFAL---CVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQH--GFPSCVR   81 (362)
Q Consensus        10 ~~~I~~~G~i~f~---~fM~~---aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~--~~p~~~~   81 (362)
                      .+.++..|-|.=.   +=|+.   ..|-|+.=|.-+.-++|. |=++++|.+.           ..+.+.+  .....-.
T Consensus        13 v~~l~~~g~i~~~~v~~a~~~vpRe~Fvp~~aY~D~~~~i~~-~~~is~P~~~-----------a~~le~L~~~~~pg~~   80 (226)
T 1i1n_A           13 IHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGF-QATISAPHMH-----------AYALELLFDQLHEGAK   80 (226)
T ss_dssp             HHHHHHTTSCCSHHHHHHHHTSCGGGTCSSCTTSSSCEEEET-TEEECCHHHH-----------HHHHHHTTTTSCTTCE
T ss_pred             HHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC-CCEECHHHHH-----------HHHHHHHHHHCCCCCE
T ss_conf             999997699799999999983999885985358888726889-9775588999-----------9999972530899998


Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             4100786468988879999741856430121023636978999998641110
Q gi|254780410|r   82 LVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        82 ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      |+|+|+|+|.++.-+.+..   .|    .-+.+-||.++.+.+.-++++...
T Consensus        81 VLdiG~GsGy~ta~la~lv---g~----~g~V~~iE~~~~l~~~a~~~l~~~  125 (226)
T 1i1n_A           81 ALDVGSGSGILTACFARMV---GC----TGKVIGIDHIKELVDDSVNNVRKD  125 (226)
T ss_dssp             EEEETCTTSHHHHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCHHHHHHHHHC---CC----CCEEEEECCCHHHHHHHHHHHHHC
T ss_conf             9997788899999999970---88----864999868899999999998654


No 53 
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold; HET: SAM; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.63  E-value=0.11  Score=30.15  Aligned_cols=61  Identities=15%  Similarity=0.134  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             9999999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .+-+..+.+.++....-+|+|+|.|.|.++.-+.+..         -.++.-|+.|+...+.-+++..+.
T Consensus        76 ~~k~~~i~~~l~l~~g~rVLDIGCG~G~~a~~~a~~~---------g~~v~gi~is~~q~~~a~~~~~~~  136 (318)
T 2fk8_A           76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF---------DVNVIGLTLSKNQHARCEQVLASI  136 (318)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             9999999996399999989897887369999999836---------963899989999999999998763


No 54 
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly, inter-subunit disulfide bridge; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.61  E-value=0.087  Score=30.81  Aligned_cols=66  Identities=23%  Similarity=0.243  Sum_probs=44.1

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             88864576711799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      .|-++++|++.           ..+.+.+.....-.|+|+|+|+|.++.-+-+ +   .      -+.+-+|.++.+.+.
T Consensus        49 ~g~~~s~p~~~-----------a~~l~~L~l~~g~~VLeIG~GsGy~ta~La~-l---~------~~V~~vE~~~~~~~~  107 (231)
T 1vbf_A           49 PGINTTALNLG-----------IFMLDELDLHKGQKVLEIGTGIGYYTALIAE-I---V------DKVVSVEINEKMYNY  107 (231)
T ss_dssp             TTEEECCHHHH-----------HHHHHHTTCCTTCEEEEECCTTSHHHHHHHH-H---S------SEEEEEESCHHHHHH
T ss_pred             CCCEECCHHHH-----------HHHHHHCCCCCCCEEEEECCCCCHHHHHHHH-H---C------CEEEEECCCHHHHHH
T ss_conf             99610148999-----------9999971899979899977987788999998-5---6------787676289999999


Q ss_pred             HHHHHHH
Q ss_conf             9864111
Q gi|254780410|r  126 QKKQLAS  132 (362)
Q Consensus       126 Q~~~l~~  132 (362)
                      -++++..
T Consensus       108 A~~~~~~  114 (231)
T 1vbf_A          108 ASKLLSY  114 (231)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCC
T ss_conf             9987406


No 55 
>3dmg_A Probable ribosomal RNA small subunit methyltransferase; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=95.58  E-value=0.044  Score=32.83  Aligned_cols=43  Identities=26%  Similarity=0.377  Sum_probs=22.8

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             21410078646898887999974185643012102363697899999864111
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      -+|+|+|.|+|.++..+++.    .      .+++.+|.|+...+.-++++..
T Consensus       235 ~~VLDlGcG~G~~~~~la~~----~------~~v~~vD~s~~~l~~a~~~~~~  277 (381)
T 3dmg_A          235 RQVLDLGAGYGALTLPLARM----G------AEVVGVEDDLASVLSLQKGLEA  277 (381)
T ss_dssp             CEEEEETCTTSTTHHHHHHT----T------CEEEEEESBHHHHHHHHHHHHH
T ss_pred             CEEEEEEEECCHHHHHHHHC----C------CEEECCCCCHHHHHHHHHHHHH
T ss_conf             98999960104888976751----9------8874146999999999999998


No 56 
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.57  E-value=0.051  Score=32.36  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=32.5

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             76214100786468988879999741856430121023636978999998641
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      ++..|+|+|+|.|..+..+++.    .     ..+++-|+.|+.+.+.-+++.
T Consensus        44 ~g~~VLDiGcG~G~~~~~l~~~----g-----~~~v~giD~S~~~i~~a~~~~   87 (253)
T 3g5l_A           44 NQKTVLDLGCGFGWHCIYAAEH----G-----AKKVLGIDLSERMLTEAKRKT   87 (253)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHT----T-----CSEEEEEESCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----C-----CCEEEEEECCCHHHHHHHHHH
T ss_conf             9698999837784999999964----9-----998999948506568998740


No 57 
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=95.57  E-value=0.017  Score=35.67  Aligned_cols=59  Identities=20%  Similarity=0.215  Sum_probs=44.3

Q ss_pred             HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             999983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   69 CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        69 ~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .+...++.-..-.|+|+|+|+|.|+.-+++.+..       .-+++.+|.++...+.-++++..+.
T Consensus       101 ~Ii~~l~i~PG~rVLEiG~GsG~lt~~LA~~v~~-------~g~V~~vD~~e~~~~~A~~n~~~~~  159 (275)
T 1yb2_A          101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNG-------KGTLTVVERDEDNLKKAMDNLSEFY  159 (275)
T ss_dssp             -----CCCCTTCEEEEECCTTSHHHHHHHHHHTT-------SSEEEEECSCHHHHHHHHHHHHTTS
T ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCC-------CCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf             9999719999798999577187899999986089-------9589999088999999998677631


No 58 
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=95.56  E-value=0.084  Score=30.89  Aligned_cols=58  Identities=17%  Similarity=0.294  Sum_probs=44.6

Q ss_pred             HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             99983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   70 AWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        70 ~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      +...++....-.|+|+|+|+|.++..+++.+.   |    .-+++.+|.++.+.+.-++++..++
T Consensus       104 Ii~~ldi~pG~~VLDiG~GsG~lt~~lA~~v~---~----~g~V~~~D~~~~~~~~A~~n~~~~g  161 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVG---S----SGKVFAYEKREEFAKLAESNLTKWG  161 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTT---T----TCEEEEECCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCC---C----CEEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             99980899999899768882799999998518---9----8099999688999999999899749


No 59 
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.52  E-value=0.064  Score=31.71  Aligned_cols=80  Identities=14%  Similarity=0.181  Sum_probs=46.4

Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHHHC-CC-
Q ss_conf             983888762141007864689888799997418564301210236369789999986411102310110-434444-56-
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLADV-PL-  148 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~~~-~~-  148 (362)
                      ..+..+..-.|+|+|+|+|.++..+.+    .      ..+++-+|.|+.+.+.-+++.... ..+.|. .++.+. +. 
T Consensus        45 ~~l~~~~~~~vLDvGcG~G~~~~~la~----~------~~~v~gvD~s~~~l~~a~~~~~~~-~~i~~~~~d~~~~~~~~  113 (216)
T 3ofk_A           45 LSLSSGAVSNGLEIGCAAGAFTEKLAP----H------CKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQFSTAE  113 (216)
T ss_dssp             HHTTTSSEEEEEEECCTTSHHHHHHGG----G------EEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTCCCSC
T ss_pred             HHCCCCCCCEEEEEECCCCHHHHHHHH----H------CCEEEEEECCHHHHHHHHHHHCCC-CEEECCCCCHHHHCCCC
T ss_conf             847998999099963889899999997----0------998999969989999999861546-22310102022323578


Q ss_pred             CCEEEEEECCCCCC
Q ss_conf             95699981228875
Q gi|254780410|r  149 GFTFLVANEFFDSL  162 (362)
Q Consensus       149 ~~~iiiaNE~lDAl  162 (362)
                      ...+|+++++|--+
T Consensus       114 ~fD~V~~~~vl~~~  127 (216)
T 3ofk_A          114 LFDLIVVAEVLYYL  127 (216)
T ss_dssp             CEEEEEEESCGGGS
T ss_pred             CCCEEEECCCHHHC
T ss_conf             71489984557758


No 60 
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=95.45  E-value=0.059  Score=31.97  Aligned_cols=65  Identities=15%  Similarity=0.172  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHC
Q ss_conf             9999999998388876214100786468988879999741856430121023636978999998641110231011
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINW  139 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w  139 (362)
                      +.++.+.+.+.+. .+-+|+|+|.|+|.++..+.+    ..      .+++-||.|+.+.+.-+++.++...++.|
T Consensus        24 ~~~~~~~~~~~~~-~~~~iLDlGCGtG~~~~~l~~----~g------~~v~gvD~S~~ml~~a~~~~~~~~~~~~~   88 (246)
T 1y8c_A           24 SDFIIEKCVENNL-VFDDYLDLACGTGNLTENLCP----KF------KNTWAVDLSQEMLSEAENKFRSQGLKPRL   88 (246)
T ss_dssp             HHHHHHHHHTTTC-CTTEEEEETCTTSTTHHHHGG----GS------SEEEEECSCHHHHHHHHHHHHHTTCCCEE
T ss_pred             HHHHHHHHHHHCC-CCCEEEEEECCCCHHHHHHHH----CC------CEEEEEECCHHHHHHHHHHCCCCCCCCCC
T ss_conf             9999999997389-989299980746299999997----49------95999967499999876311223443222


No 61 
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.43  E-value=0.098  Score=30.44  Aligned_cols=92  Identities=20%  Similarity=0.207  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCC------
Q ss_conf             99999999998388876214100786468988879999741856430121023636978999998641110231------
Q gi|254780410|r   63 LAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDK------  136 (362)
Q Consensus        63 ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~------  136 (362)
                      -..++.+.++..+   .-.|+|+|+|+|.++.-+.+.    .|    ..+++.+|.|+.+.+.-+++++.....      
T Consensus        17 r~~~v~~~l~~~~---~~rVLDvGcG~G~~~~~l~~~----~~----~~~v~gvD~s~~~l~~A~~~~~~~~~~~~~~~~   85 (217)
T 3jwh_A           17 RMNGVVAALKQSN---ARRVIDLGCGQGNLLKILLKD----SF----FEQITGVDVSYRSLEIAQERLDRLRLPRNQWER   85 (217)
T ss_dssp             HHHHHHHHHHHTT---CCEEEEETCTTCHHHHHHHHC----TT----CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTT
T ss_pred             HHHHHHHHHHCCC---CCEEEEEECCCCHHHHHHHHH----CC----CCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             9999999733218---398999818887999999984----76----522521038999999999988762453112222


Q ss_pred             HHC-CCCHHHC--C-CCCEEEEEECCCCCCCEE
Q ss_conf             011-0434444--5-695699981228875235
Q gi|254780410|r  137 INW-YTSLADV--P-LGFTFLVANEFFDSLPIK  165 (362)
Q Consensus       137 v~w-~~~l~~~--~-~~~~iiiaNE~lDAlPv~  165 (362)
                      +.. ..+....  + ....+|++.++|..+|-.
T Consensus        86 ~~~~~~~~~~~~~~~~~fD~I~~~~vl~hl~~~  118 (217)
T 3jwh_A           86 LQLIQGALTYQDKRFHGYDAATVIEVIEHLDLS  118 (217)
T ss_dssp             EEEEECCTTSCCGGGCSCSEEEEESCGGGCCHH
T ss_pred             CCCCCCCHHHCHHCCCCCCEEEEEHHHHCCCHH
T ss_conf             100126643440004765655010338718978


No 62 
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.36  E-value=0.11  Score=29.99  Aligned_cols=152  Identities=12%  Similarity=0.116  Sum_probs=76.8

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCCCCHHHCCCCCE
Q ss_conf             3888762141007864689888799997418564301210236369789999986411102--31011043444456956
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWYTSLADVPLGFT  151 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~~~l~~~~~~~~  151 (362)
                      ++....-.|+|+|.|+|.++..+.+.     +    ..+++-||.|+.+.+.-+++....+  ++|.+            
T Consensus        32 l~l~pg~rVLDiGcG~G~~~~~la~~-----~----~~~v~gvD~s~~~l~~a~~~~~~~gl~~~v~~------------   90 (256)
T 1nkv_A           32 LRMKPGTRILDLGSGSGEMLCTWARD-----H----GITGTGIDMSSLFTAQAKRRAEELGVSERVHF------------   90 (256)
T ss_dssp             TCCCTTCEEEEETCTTCHHHHHHHHH-----T----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE------------
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHH-----C----CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC------------
T ss_conf             08999999999858888899999986-----4----99899998983677899886776065544441------------


Q ss_pred             EEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
Q ss_conf             99981228875235899915664689989960795352257643432234633165684112793478999999997620
Q gi|254780410|r  152 FLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLAC  231 (362)
Q Consensus       152 iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~  231 (362)
                       +.+ ...+-+|-..|        -..+..   +                         ..+..+.....++.+...|+.
T Consensus        91 -~~~-d~~~~~~~~~f--------D~v~~~---~-------------------------~~~~~~~~~~~l~~~~r~Lkp  132 (256)
T 1nkv_A           91 -IHN-DAAGYVANEKC--------DVAACV---G-------------------------ATWIAGGFAGAEELLAQSLKP  132 (256)
T ss_dssp             -EES-CCTTCCCSSCE--------EEEEEE---S-------------------------CGGGTSSSHHHHHHHTTSEEE
T ss_pred             -CCC-CHHHCCCCCCE--------EEEEEE---C-------------------------CEECCCCHHHHHHHHHHHCCC
T ss_conf             -136-36450567844--------699997---4-------------------------410268999999999997393


Q ss_pred             CCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCE
Q ss_conf             57059996243368588880776405767670001000345312688999999996898363323
Q gi|254780410|r  232 DGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLT  296 (362)
Q Consensus       232 ~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~  296 (362)
                       +|.+++.|...........+.           ...+............+...++++|+.++...
T Consensus       133 -gG~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~t~~~~~~~~~~aGf~~v~~~  185 (256)
T 1nkv_A          133 -GGIMLIGEPYWRQLPATEEIA-----------QACGVSSTSDFLTLPGLVGAFDDLGYDVVEMV  185 (256)
T ss_dssp             -EEEEEEEEEEETTCCSSHHHH-----------HTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred             -CCEEEEEECCCCCCCCCHHHH-----------HHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             -868999966445789817899-----------87255787677899999999998599899999


No 63 
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A
Probab=95.31  E-value=0.035  Score=33.47  Aligned_cols=49  Identities=8%  Similarity=0.032  Sum_probs=36.2

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             8876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .++.-.|+|+|.|.|..+..+.+    ..     ..+++-||+|+.+.+.-+++.++.
T Consensus        44 l~~~~~VLDIGCG~G~~~~~lA~----~~-----~~~V~giD~s~~~l~~a~~~~~~~   92 (267)
T 3kkz_A           44 LTEKSLIADIGCGTGGQTMVLAG----HV-----TGQVTGLDFLSGFIDIFNRNARQS   92 (267)
T ss_dssp             CCTTCEEEEETCTTCHHHHHHHT----TC-----SSEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----HC-----CCEEEEEECCCHHHHHHHHHCCCC
T ss_conf             99999899962789799999997----47-----998999979731658988732323


No 64 
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.25  E-value=0.052  Score=32.32  Aligned_cols=53  Identities=25%  Similarity=0.237  Sum_probs=35.8

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             99999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   67 LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        67 ~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +++.+.....|.  .|+|+|+|.|.++.-+.    +..      .+++-||+|+.+.+.-++++.
T Consensus        33 ~~~~~~~~~~~~--~VLDiGCG~G~~~~~l~----~~~------~~v~giD~s~~~l~~a~~~~~   85 (250)
T 2p7i_A           33 MVRAFTPFFRPG--NLLELGSFKGDFTSRLQ----EHF------NDITCVEASEEAISHAQGRLK   85 (250)
T ss_dssp             HHHHHGGGCCSS--CEEEESCTTSHHHHHHT----TTC------SCEEEEESCHHHHHHHHHHSC
T ss_pred             HHHHHHCCCCCC--CEEEEECCCCHHHHHHH----HHC------CEEEEEECCHHHHHHHHHHHH
T ss_conf             999853107999--39999289879999999----509------979999671688889998630


No 65 
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=95.05  E-value=0.058  Score=32.00  Aligned_cols=44  Identities=18%  Similarity=0.360  Sum_probs=32.2

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             887621410078646898887999974185643012102363697899999864
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                      .+++-.|+|+|+|+|.++..+.+    .      ..+++-+|.|+.+.+.-+++
T Consensus        52 ~~~~~~VLDiGCGtG~~~~~la~----~------g~~v~giD~S~~ml~~Ak~~   95 (260)
T 2avn_A           52 LKNPCRVLDLGGGTGKWSLFLQE----R------GFEVVLVDPSKEMLEVAREK   95 (260)
T ss_dssp             CCSCCEEEEETCTTCHHHHHHHT----T------TCEEEEEESCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----C------CCEEEEEECHHHHHHHHHHH
T ss_conf             79969899989999888999986----1------99899993523788999883


No 66 
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.70A {Bacillus thuringiensis}
Probab=95.00  E-value=0.077  Score=31.17  Aligned_cols=44  Identities=18%  Similarity=0.171  Sum_probs=31.8

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      +..-.|+|+|.|+|.++..+.+.          ..+++-++.|+.+.+.-+++.
T Consensus        52 ~~~~~VLDiGcG~G~~~~~l~~~----------~~~v~giD~s~~~l~~a~~~~   95 (242)
T 3l8d_A           52 KKEAEVLDVGCGDGYGTYKLSRT----------GYKAVGVDISEVMIQKGKERG   95 (242)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHCC
T ss_conf             99697999658885999999964----------998999979746679987503


No 67 
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.99  E-value=0.075  Score=31.22  Aligned_cols=94  Identities=17%  Similarity=0.248  Sum_probs=58.2

Q ss_pred             CCCCCCCCCCCCC-CCCEEEC----------CCCCHHHHHHHH--------HHHHHHHHHCCCCCCCEEEEECCCCHHHH
Q ss_conf             8786468988888-8886457----------671179999999--------99999999838887621410078646898
Q gi|254780410|r   33 EFGYYSTCNPFGA-VGDFVTA----------PEISQIFGEMLA--------IFLICAWEQHGFPSCVRLVELGPGRGIMM   93 (362)
Q Consensus        33 ~~GYY~~~~~~G~-~GDF~Ts----------p~is~~Fg~~ia--------~~~~~~~~~~~~p~~~~ivE~GaG~G~La   93 (362)
                      .+|++.-.+.+|+ .||.+++          |.+.... ..+-        .-+..+...++....-.|+|+|+|+|.++
T Consensus        30 ~~G~~~~~~iig~~~G~~v~~~~g~~~~~~~p~~~~~~-~~~~r~~qiiyp~d~~~Ii~~l~i~pG~rVLd~G~GsG~lt  108 (255)
T 3mb5_A           30 DLGILKLEEIIGRNFGEAIKSHKGHEFKILRPRIVDYL-DKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALT  108 (255)
T ss_dssp             TTEEEEGGGGTTCCTTCEEECTTCCEEEEECCCHHHHH-HHSCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHH
T ss_pred             CCEEEEHHHHCCCCCCCEEEECCCCEEEEECCCHHHHH-HHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
T ss_conf             88888789962999981999589978999589989998-41878874658899999999719898998998886627999


Q ss_pred             HHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             88799997418564301210236369789999986411102
Q gi|254780410|r   94 LDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        94 ~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      ..+.+...   |    .-+++.+|.|+.+.+.-++++...+
T Consensus       109 ~~lar~~~---~----~G~V~~~D~~~~~~~~A~~n~~~~g  142 (255)
T 3mb5_A          109 LFLANIVG---P----EGRVVSYEIREDFAKLAWENIKWAG  142 (255)
T ss_dssp             HHHHHHHC---T----TSEEEEECSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHCC---C----CCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf             99997438---8----9779983499999999999999719


No 68 
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=94.96  E-value=0.16  Score=29.02  Aligned_cols=68  Identities=18%  Similarity=0.202  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHH
Q ss_conf             99999999999983888762141007864689888799997418564301210236369789999986411102--3101
Q gi|254780410|r   61 EMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKIN  138 (362)
Q Consensus        61 ~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~  138 (362)
                      +.+|.++...+.....  .-.|+++|+|.|.++.-+.+.          ..+++.||.|+...+.-+++....+  ++|.
T Consensus        63 e~ia~~ia~~~~~~~~--~~~vlD~gcG~G~~~~~la~~----------~~~v~~iD~s~~~i~~a~~n~~~~~~~~~i~  130 (241)
T 3gdh_A           63 EKIAEHIAGRVSQSFK--CDVVVDAFCGVGGNTIQFALT----------GMRVIAIDIDPVKIALARNNAEVYGIADKIE  130 (241)
T ss_dssp             HHHHHHHHHHHHHHSC--CSEEEETTCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEE
T ss_pred             HHHHHHHHHHHHHCCC--CCEEEECCCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHHCCCCCCEE
T ss_conf             9999999998650289--998999378736889999967----------9989999897788899999999849987439


Q ss_pred             CC
Q ss_conf             10
Q gi|254780410|r  139 WY  140 (362)
Q Consensus       139 w~  140 (362)
                      ++
T Consensus       131 ~~  132 (241)
T 3gdh_A          131 FI  132 (241)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99


No 69 
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=94.94  E-value=0.017  Score=35.63  Aligned_cols=74  Identities=16%  Similarity=0.241  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCH
Q ss_conf             99999999999999983888762141007864689888799997418564301210236369789999986411102310
Q gi|254780410|r   58 IFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKI  137 (362)
Q Consensus        58 ~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v  137 (362)
                      ++||+.-..+.++++.++....-.++++|.|.|.++..+....        ...+.+=||.|+.+.+.-+++..++....
T Consensus       222 vYGE~~p~~i~~Il~~l~Lkpgd~fLDLGCG~G~vvl~aA~~~--------g~~~viGIDis~~~l~~A~~~~~e~~~~~  293 (433)
T 1u2z_A          222 VYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC--------GCALSFGCEIMDDASDLTILQYEELKKRC  293 (433)
T ss_dssp             CCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH--------CCSEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             3000688999999998289999989974899989999999975--------99879999799999999999999988776


Q ss_pred             HC
Q ss_conf             11
Q gi|254780410|r  138 NW  139 (362)
Q Consensus       138 ~w  139 (362)
                      .|
T Consensus       294 ~~  295 (433)
T 1u2z_A          294 KL  295 (433)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             66


No 70 
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=94.93  E-value=0.032  Score=33.74  Aligned_cols=66  Identities=15%  Similarity=0.169  Sum_probs=44.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             7671179999999999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      .|--|.+     |..+..-.+.+.....-.|+++|+|+|+.+..+.+..    |    .-.++.||.||.+.+.-+++.
T Consensus        53 ~p~rskl-----~a~i~~~l~~l~ikpg~~VLDlGcGtG~~~~~la~~~----~----~G~V~aVDiSp~mi~~a~~~a  118 (230)
T 1fbn_A           53 NPNKSKL-----AAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIA----D----KGIVYAIEYAPRIMRELLDAC  118 (230)
T ss_dssp             CTTTCHH-----HHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHT----T----TSEEEEEESCHHHHHHHHHHT
T ss_pred             CCCCCHH-----HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHH
T ss_conf             8972589-----9999855762687999999996797798999999758----9----965999979989999999877


No 71 
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1, methyltransferase domain, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti MAFF303099}
Probab=94.92  E-value=0.11  Score=30.08  Aligned_cols=83  Identities=17%  Similarity=0.176  Sum_probs=44.6

Q ss_pred             HHHHHCCCCCCCCCCCCCCCC-CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             998710898786468988888-8886457671179999999999999998388876214100786468988879999741
Q gi|254780410|r   25 FALCVADPEFGYYSTCNPFGA-VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKL  103 (362)
Q Consensus        25 M~~aLy~p~~GYY~~~~~~G~-~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~  103 (362)
                      |..-+|+ +-.||..-..... ...+-..++.+ .        +.++   +..-+.-.|+|+|.|+|.++.-+.+.    
T Consensus         2 ~~~~~~~-~~~f~~~y~~~~~~~~~~~~~~~~~-~--------~~~~---~p~~~g~rVLDiGCG~G~~~~~l~~~----   64 (243)
T 3bkw_A            2 MAQNIYD-QPDFFAGYSQLGRSIEGLDGAAEWP-A--------LRAM---LPEVGGLRIVDLGCGFGWFCRWAHEH----   64 (243)
T ss_dssp             ------------------------CGGGCTTHH-H--------HHHH---SCCCTTCEEEEETCTTCHHHHHHHHT----
T ss_pred             CCCCCCC-CHHHHHHHHHHHHCCCCHHHHHHHH-H--------HHHH---CCCCCCCEEEEECCCCCHHHHHHHHC----
T ss_conf             9854368-8999999986231300365637799-9--------9985---79778899999788898999999975----


Q ss_pred             CHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             85643012102363697899999864
Q gi|254780410|r  104 KPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus       104 ~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                       +    ..+++.+|.|+.+.+.-+++
T Consensus        65 -~----~~~V~gvD~S~~~l~~a~~~   85 (243)
T 3bkw_A           65 -G----ASYVLGLDLSEKMLARARAA   85 (243)
T ss_dssp             -T----CSEEEEEESCHHHHHHHHHT
T ss_pred             -C----CCEEEEECCHHHHHHHHHHH
T ss_conf             -9----87899987579899999861


No 72 
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.86  E-value=0.13  Score=29.68  Aligned_cols=64  Identities=20%  Similarity=0.188  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             999999999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   59 FGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        59 Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      +-+.++..+.-++.....+.+..++++|.|.|+|++-+.+.    .|.    .++..||+++.+.+.-++.+
T Consensus        70 Y~r~m~~~~~~~~~~~~~~~p~rvL~lG~G~g~l~r~l~~~----~P~----~~v~~VEidp~vi~~ar~~f  133 (317)
T 3gjy_A           70 YMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADV----YPQ----SRNTVVELDAELARLSREWF  133 (317)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHH----STT----CEEEEEESCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHHC
T ss_conf             99999998875021246998877999899689999999997----899----86999979889999999867


No 73 
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=94.84  E-value=0.22  Score=27.98  Aligned_cols=65  Identities=9%  Similarity=0.045  Sum_probs=45.3

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC
Q ss_conf             9999983888762141007864689888799997418564301210236369789999986411102--310110
Q gi|254780410|r   68 ICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY  140 (362)
Q Consensus        68 ~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~  140 (362)
                      -+++.+.=.|. -.|+|+|+|+|.++.-+++.+.   |    ..+++-+|.|+.+.+.-+++..+.+  .+|.++
T Consensus        13 ~~~l~~~ik~G-~~VLDlGcG~G~~t~~la~~~~---~----~~~V~giDis~~~l~~ar~~~~~~g~~~~v~~~   79 (197)
T 3eey_A           13 HDYIKMFVKEG-DTVVDATCGNGNDTAFLASLVG---E----NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLI   79 (197)
T ss_dssp             HHHHHHHCCTT-CEEEESCCTTSHHHHHHHHHHC---T----TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             HHHHHHHCCCC-CEEEEEEEECCHHHHHHHHHHC---C----CEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             99999858999-9999992048899999999838---9----819999973889989999999983998778999


No 74 
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=94.83  E-value=0.22  Score=27.99  Aligned_cols=55  Identities=16%  Similarity=0.143  Sum_probs=38.1

Q ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   65 IFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        65 ~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      ..+.+..+.. .|.+-+|+|+|.|+|.++.-+.+.          -.+++-+|.|+.+.+.-+++.
T Consensus        28 ~~~~~~~~~~-~~~~~~VLDiGcG~G~~~~~la~~----------g~~v~giD~S~~~l~~a~~~~   82 (239)
T 3bxo_A           28 SDIADLVRSR-TPEASSLLDVACGTGTHLEHFTKE----------FGDTAGLELSEDMLTHARKRL   82 (239)
T ss_dssp             HHHHHHHHHH-CTTCCEEEEETCTTSHHHHHHHHH----------HSEEEEEESCHHHHHHHHHHC
T ss_pred             HHHHHHHHHH-CCCCCEEEEEECCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHCC
T ss_conf             9999999974-899498999817584999999973----------996999969678878886336


No 75 
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.83  E-value=0.043  Score=32.90  Aligned_cols=45  Identities=18%  Similarity=0.203  Sum_probs=33.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             7621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      .+-.|+|+|.|.|.++..+.+    .      ..+++-+|.|+.+.+.-+++...
T Consensus        52 ~~~~vLDiGcG~G~~~~~l~~----~------g~~v~gvD~S~~~i~~A~~~~~~   96 (227)
T 3e8s_A           52 QPERVLDLGCGEGWLLRALAD----R------GIEAVGVDGDRTLVDAARAAGAG   96 (227)
T ss_dssp             CCSEEEEETCTTCHHHHHHHT----T------TCEEEEEESCHHHHHHHHHTCSS
T ss_pred             CCCEEEEECCCCCHHHHHHHH----C------CCEEEEECCCHHHHHHHHHHCCC
T ss_conf             959899976898399999997----6------99699986817889999986014


No 76 
>1xva_A Glycine N-methyltransferase; HET: SAM; 2.20A {Escherichia coli} SCOP: c.66.1.5 PDB: 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=94.80  E-value=0.16  Score=29.04  Aligned_cols=85  Identities=21%  Similarity=0.327  Sum_probs=50.8

Q ss_pred             CCCCCC-CCCCCCC--CEEECCCCCHHHHH----------HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHH
Q ss_conf             864689-8888888--86457671179999----------9999999999983888762141007864689888799997
Q gi|254780410|r   35 GYYSTC-NPFGAVG--DFVTAPEISQIFGE----------MLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVIC  101 (362)
Q Consensus        35 GYY~~~-~~~G~~G--DF~Tsp~is~~Fg~----------~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~  101 (362)
                      ++|.++ ...+.+|  |.|+-.+...+.-.          ....|+...+...+   .-.|+|+|+|+|.++..+.+.  
T Consensus         3 ~v~~~r~~~~~~~~~~d~y~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~vLDiGcG~G~~~~~la~~--   77 (292)
T 1xva_A            3 SVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHG---CHRVLDVACGTGVDSIMLVEE--   77 (292)
T ss_dssp             CCCCSSCTTCCCTTSCCTTTTSHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHTT---CCEEEESSCTTSHHHHHHHHT--
T ss_pred             CEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC---CCEEEEECCCCCHHHHHHHHC--
T ss_conf             358834457544586244306468889999725456678999999999641318---499999047884999999977--


Q ss_pred             HCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             4185643012102363697899999864111
Q gi|254780410|r  102 KLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus       102 ~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                              -.+++-++.|+.+.+.-+++...
T Consensus        78 --------g~~v~gvD~s~~ml~~a~~~~~~  100 (292)
T 1xva_A           78 --------GFSVTSVDASDKMLKYALKERWN  100 (292)
T ss_dssp             --------TCEEEEEESCHHHHHHHHHHHHH
T ss_pred             --------CCEEEEEECCHHHHHHHHHHHHH
T ss_conf             --------99699998999999999999986


No 77 
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, PSI, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=94.78  E-value=0.09  Score=30.69  Aligned_cols=58  Identities=17%  Similarity=0.282  Sum_probs=43.7

Q ss_pred             HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             99998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   69 CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        69 ~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .+...++....-.|+|+|.|+|.|+..+++.+.   |    .-+++-+|.++...+.-++++..+
T Consensus        90 ~Ii~~ldi~PG~~VLE~GtGsG~lT~~LAr~vg---p----~G~V~t~D~~~~~~~~Ar~n~~~~  147 (280)
T 1i9g_A           90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVG---P----AGQVISYEQRADHAEHARRNVSGC  147 (280)
T ss_dssp             HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC---T----TSEEEEECSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHC---C----CEEEEEEECCHHHHHHHHHHHHHH
T ss_conf             999984999999899922761599999999749---9----859999958999999999855543


No 78 
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.78  E-value=0.099  Score=30.42  Aligned_cols=88  Identities=22%  Similarity=0.238  Sum_probs=52.1

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC------CHHCC
Q ss_conf             999999838887621410078646898887999974185643012102363697899999864111023------10110
Q gi|254780410|r   67 LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGD------KINWY  140 (362)
Q Consensus        67 ~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~------~v~w~  140 (362)
                      +.+.+...   ..-.|+|+|.|.|.++.-+.    +..    ...+++.++.|+...+.-++++.....      .+.+.
T Consensus        21 v~~~l~~~---~~~rVLDvGCG~G~~~~~La----~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~   89 (219)
T 3jwg_A           21 VVAVLKSV---NAKKVIDLGCGEGNLLSLLL----KDK----SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF   89 (219)
T ss_dssp             HHHHHHHT---TCCEEEEETCTTCHHHHHHH----TST----TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred             HHHHCCCC---CCCEEEEEECCCCHHHHHHH----HHC----CCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf             99964112---84989998187899999999----838----97456322599999999999865504412320010001


Q ss_pred             -CCHHHC---CCCCEEEEEECCCCCCCEE
Q ss_conf             -434444---5695699981228875235
Q gi|254780410|r  141 -TSLADV---PLGFTFLVANEFFDSLPIK  165 (362)
Q Consensus       141 -~~l~~~---~~~~~iiiaNE~lDAlPv~  165 (362)
                       .+..+.   .....+|++.+++.-+|-.
T Consensus        90 ~~~~~~~~~~~~~fD~i~~~~vl~hl~~~  118 (219)
T 3jwg_A           90 QSSLVYRDKRFSGYDAATVIEVIEHLDEN  118 (219)
T ss_dssp             ECCSSSCCGGGTTCSEEEEESCGGGCCHH
T ss_pred             CCCHHHCCHHCCCCCEEHHHHHHHHCCHH
T ss_conf             14533250003655456275569718958


No 79 
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus HB27}
Probab=94.78  E-value=0.1  Score=30.36  Aligned_cols=58  Identities=14%  Similarity=0.158  Sum_probs=43.1

Q ss_pred             HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             99983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   70 AWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        70 ~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      +...++....-.|+|+|.|+|.++.-+.+.+..       .-.++-+|.++.+.+.-++++..+.
T Consensus        88 Ii~~l~i~pG~~VLEiG~GsG~lt~~lA~~v~~-------~g~V~~~d~~~~~~~~A~~n~~~~~  145 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGE-------KGLVESYEARPHHLAQAERNVRAFW  145 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCT-------TSEEEEEESCHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCC-------CCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             999719899999998777067999999997288-------7389998489999999999999808


No 80 
>3ndi_A Methyltransferase; S-adenosylmethionine, kijanose, tetronitrose, tetradeoxysuga micromonospora chalcea, TCAB9, SUGA methylation; HET: SAM TMP; 1.50A {Micromonospora chalcea} PDB: 3ndj_A*
Probab=94.74  E-value=0.2  Score=28.34  Aligned_cols=229  Identities=14%  Similarity=0.030  Sum_probs=101.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             11799999999999999983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   55 ISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        55 is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .|+.+-+-+......++.......+-.|+|+|+|+|.|+.    .+++..      .+.+=+|+|+...+..++.--..-
T Consensus        84 ~s~~~~~~~~~~~~~l~~~~~~~~~~~ileIG~~dG~lL~----~~~~~~------~~~~Gidps~~~~~~~~~~~~~~~  153 (416)
T 3ndi_A           84 GSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLR----TIQEAG------VRHLGFEPSSGVAAKAREKGIRVR  153 (416)
T ss_dssp             GCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHH----HHHHTT------CEEEEECSCHHHHHHHHHTTCCEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH----HHHHCC------CCEEEECCCCCHHHHHCCCCCCEE
T ss_conf             9889999999999999987434778779983588870544----334203------532442256203444303556368


Q ss_pred             CCHHCCCCHHHC---CCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             310110434444---56956999812288752358999156646899899607953522576434322346331656841
Q gi|254780410|r  135 DKINWYTSLADV---PLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAI  211 (362)
Q Consensus       135 ~~v~w~~~l~~~---~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  211 (362)
                      ......+...++   ...+.+|+++-+|.-+|=-.-     -+..+.-.+++++.+.+....................-.
T Consensus       154 ~~~~~~~~~~~~~~~~~k~D~I~~~~vleHi~dp~~-----fl~~i~~~L~~~G~~~ievp~~~~~~~~~~~~~i~~eH~  228 (416)
T 3ndi_A          154 TDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQS-----VLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIYDEHF  228 (416)
T ss_dssp             CSCCSHHHHHHHHHHHCCEEEEEEESCGGGCSCHHH-----HHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCC
T ss_pred             EECCHHHHHHHHHHCCCCCCEEEEEEEHHCCCCHHH-----HHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCEEECCCC
T ss_conf             404205667888851587518877500531502899-----999999874668769998165032112467661555744


Q ss_pred             ECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC-----------CCCCCCCCCCCCCHHH
Q ss_conf             12793478999999997620570599962433685888807764057676700-----------0100034531268899
Q gi|254780410|r  212 FENSPCRDREMQSISDRLACDGGTAIVIDYGYLQSRVGDTLQAVKGHTYVSPL-----------VNPGQADLSSHVDFQR  280 (362)
Q Consensus       212 ~E~~~~~~~~~~~i~~~l~~~~G~~L~iDYGy~~~r~~gTLr~y~~H~~~dpl-----------~~pG~~DITahVnFs~  280 (362)
                      .=++      ..++.+.+.+. | +-++|...... .+|+++.+..++....-           ...+..+.....+|..
T Consensus       229 ~yfs------~~sl~~ll~~~-g-~~i~~~~~~~~-~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (416)
T 3ndi_A          229 FLFS------ATSVQGMAQRC-G-FELVDVQRLPV-HGGEVRYTLARQGSRTPSAAVAQLLAAEREQELSDMATLRAFAG  299 (416)
T ss_dssp             EECC------HHHHHHHHHHT-T-EEEEEEEEECG-GGSEEEEEEEETTSSCCCHHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred             EECC------HHHHHHHHHHC-C-CEEEEEEEEEC-CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             3676------78999999865-9-67999886411-68525336765177655421110357788764011356678999


Q ss_pred             HHHH-----------HHHCCCEEEC--CEEHHHHHHH-CCH
Q ss_conf             9999-----------9968983633--2338999997-897
Q gi|254780410|r  281 LSSI-----------AILYKLYING--LTTQGKFLEG-LGI  307 (362)
Q Consensus       281 L~~~-----------a~~~g~~~~g--~~sQ~~FL~~-~GI  307 (362)
                      -.+.           ..+.+-.+.+  -.+.+..|++ +|+
T Consensus       300 ~~~~~~~~~~~~l~~~~~~~~~i~~~GA~~~~~~ll~~~~l  340 (416)
T 3ndi_A          300 NVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGI  340 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCC
T ss_conf             99999999999999999749915897045178999998188


No 81 
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.72  E-value=0.082  Score=30.98  Aligned_cols=45  Identities=13%  Similarity=0.180  Sum_probs=33.7

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             8762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      |..-.|+|+|.|+|.++.-+.+.          ..+++-+|.|+.+.+..+++.+
T Consensus        45 ~~~~~vLDlGCG~G~~~~~l~~~----------~~~v~giD~s~~~i~~a~~~~~   89 (195)
T 3cgg_A           45 PRGAKILDAGCGQGRIGGYLSKQ----------GHDVLGTDLDPILIDYAKQDFP   89 (195)
T ss_dssp             CTTCEEEEETCTTTHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHCC
T ss_conf             99998999768885999999976----------9989999797277899997302


No 82 
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.70  E-value=0.13  Score=29.51  Aligned_cols=61  Identities=11%  Similarity=0.205  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             999999999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   63 LAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        63 ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +...+...+.+.-...+-.|+|+|.|+|.++..+.+.    .|+    .+++-+|+|+...+.-+++.+
T Consensus        70 ~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~~~----~~~~gvD~s~~~l~~a~~~~~  130 (269)
T 1p91_A           70 LRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADA----LPE----ITTFGLDVSKVAIKAAAKRYP  130 (269)
T ss_dssp             HHHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHT----CTT----SEEEEEESCHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHCCC
T ss_conf             9999999998547888996999689896999999986----899----689999795889999985177


No 83 
>3ege_A Putative methyltransferase from antibiotic biosynthesis pathway; YP_324569.1, structural genomics; 2.40A {Anabaena variabilis atcc 29413}
Probab=94.61  E-value=0.042  Score=32.97  Aligned_cols=80  Identities=14%  Similarity=0.213  Sum_probs=48.8

Q ss_pred             HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC-CHHHCC
Q ss_conf             9999838887621410078646898887999974185643012102363697899999864111023101104-344445
Q gi|254780410|r   69 CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT-SLADVP  147 (362)
Q Consensus        69 ~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~-~l~~~~  147 (362)
                      .+++.++.+..-.|+|+|+|+|.++..+.+.          ..+++-||+|+.+.+..+.     ..++.|+. +..++|
T Consensus        25 ~~~~~l~l~~~~~vLDvGcG~G~~~~~l~~~----------~~~v~gvD~s~~~~~~a~~-----~~~~~~~~~d~~~l~   89 (261)
T 3ege_A           25 AIINLLNLPKGSVIADIGAGTGGYSVALANQ----------GLFVYAVEPSIVMRQQAVV-----HPQVEWFTGYAENLA   89 (261)
T ss_dssp             HHHHHHCCCTTCEEEEETCTTSHHHHHHHTT----------TCEEEEECSCHHHHHSSCC-----CTTEEEECCCTTSCC
T ss_pred             HHHHHCCCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEEECCCCCCCCCCC-----CCCHHHHHHHHHHCC
T ss_conf             9999659999699999648888999999976----------9989999744531210001-----221013334454302


Q ss_pred             --CC-CEEEEEECCCCCCC
Q ss_conf             --69-56999812288752
Q gi|254780410|r  148 --LG-FTFLVANEFFDSLP  163 (362)
Q Consensus       148 --~~-~~iiiaNE~lDAlP  163 (362)
                        ++ ..+|+++..+--+|
T Consensus        90 ~~~~~fD~v~~~~~l~~~~  108 (261)
T 3ege_A           90 LPDKSVDGVISILAIHHFS  108 (261)
T ss_dssp             SCTTCBSEEEEESCGGGCS
T ss_pred             CCCCCCCEEEECCHHHHCC
T ss_conf             5676013775401277468


No 84 
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA-binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} PDB: 3id5_B*
Probab=94.59  E-value=0.048  Score=32.54  Aligned_cols=67  Identities=15%  Similarity=0.067  Sum_probs=44.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             7671179999999999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      .|--|.+=     ..+..-.+.+.....-.|+|+|+|+|+.+..+.+.+.       ..-.++.||.|+...+.-+++.
T Consensus        55 ~p~rSkla-----aai~~gl~~~~lkpG~~VLdLG~G~G~~~~~la~~Vg-------~~G~V~aVD~s~~~l~~a~~~a  121 (232)
T 3id6_C           55 NAFRSKLA-----GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIE-------LNGKAYGVEFSPRVVRELLLVA  121 (232)
T ss_dssp             CTTTCHHH-----HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHT-------TTSEEEEEECCHHHHHHHHHHH
T ss_pred             CCCCCHHH-----HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHH
T ss_conf             87502899-----9998433305889999999967718899999999715-------6876999979999999999765


No 85 
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=94.58  E-value=0.081  Score=31.01  Aligned_cols=43  Identities=16%  Similarity=0.229  Sum_probs=32.0

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             62141007864689888799997418564301210236369789999986411
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +-.|+|+|+|+|.++..+++.          ..+++-+|.|+...+.-++++.
T Consensus        18 ~~~VLDiGcG~G~~~~~l~~~----------~~~v~gvD~s~~~i~~a~~~~~   60 (170)
T 3i9f_A           18 KGVIVDYGCGNGFYCKYLLEF----------ATKLYCIDINVIALKEVKEKFD   60 (170)
T ss_dssp             CEEEEEETCTTCTTHHHHHTT----------EEEEEEECSCHHHHHHHHHHCT
T ss_pred             CCEEEEEECCCCHHHHHHHHC----------CCEEEEEECCCCCCCEECCCCE
T ss_conf             697999808997999999962----------9989999456420100012210


No 86 
>1r18_A Protein-L-isoaspartate(D-aspartate)-O- methyltransferase; isomerization, protein repair, S- adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.52  E-value=0.14  Score=29.34  Aligned_cols=113  Identities=19%  Similarity=0.266  Sum_probs=61.4

Q ss_pred             HHHHHHHHCCCCCHHHHHHH------HHCCCCCCCCCC-CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99999981898049999998------710898786468-98888888864576711799999999999999983888762
Q gi|254780410|r    8 KIVNLIKKNGQMTVDQYFAL------CVADPEFGYYST-CNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCV   80 (362)
Q Consensus         8 ~i~~~I~~~G~i~f~~fM~~------aLy~p~~GYY~~-~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~   80 (362)
                      .+.+.++..|-|.=.+-.+.      ..|=|+. -|.- .-++|. |-++.+|.+.       |+ +.+.+.. .....-
T Consensus        18 ~mV~~l~~~g~i~d~~v~~a~~~vpRe~Fvp~~-aY~D~~lpi~~-~~~is~P~~~-------a~-~l~~L~~-~l~pg~   86 (227)
T 1r18_A           18 DLIRQLKDHGVIASDAVAQAMKETDRKHYSPRN-PYMDAPQPIGG-GVTISAPHMH-------AF-ALEYLRD-HLKPGA   86 (227)
T ss_dssp             HHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSC-TTBSSCEEEET-TEEECCHHHH-------HH-HHHHTTT-TCCTTC
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCC-CCCCCCCCCCC-CCEECCHHHH-------HH-HHHHHHH-HCCCCC
T ss_conf             999999984998999999999829998869732-27888856899-9886336999-------99-9997675-389998


Q ss_pred             EEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             14100786468988879999741856430121023636978999998641110
Q gi|254780410|r   81 RLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        81 ~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .|+|+|+|+|.++.=+.+.+....  .....+++-||.++.+.+.-++++...
T Consensus        87 ~VLeIG~GtGy~ta~la~l~g~~g--~~~~~~V~~iE~~~~l~~~A~~~l~~~  137 (227)
T 1r18_A           87 RILDVGSGSGYLTACFYRYIKAKG--VDADTRIVGIEHQAELVRRSKANLNTD  137 (227)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHSC--CCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCC--CCCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             899957997799999999853315--777668999947899999999999760


No 87 
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=94.51  E-value=0.27  Score=27.45  Aligned_cols=60  Identities=17%  Similarity=0.133  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      -.|+-+.+.+...+..-.|+|+|.|+|..+.-+.+.         ...+++-|++|+...+.-+++...
T Consensus        50 ~n~vK~~Li~~~~~~~~~VLDlGCG~G~~~~~~~~~---------~~~~v~GiD~S~~~l~~a~~r~~~  109 (298)
T 1ri5_A           50 NNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERA---------GIGEYYGVDIAEVSINDARVRARN  109 (298)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHH---------TCSEEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHC---------CCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             589999999984899598999637087899999966---------998588758999999999999875


No 88 
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research center for structural genomics, protein structure initiative, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.49  E-value=0.17  Score=28.88  Aligned_cols=75  Identities=12%  Similarity=0.105  Sum_probs=45.9

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCC--HHCCC--CHHHCC-C
Q ss_conf             388876214100786468988879999741856430121023636978999998641110231--01104--344445-6
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDK--INWYT--SLADVP-L  148 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~--v~w~~--~l~~~~-~  148 (362)
                      ......-.|+|+|.|+|.++.-+....    |    ..+++.+|.|+...+.-++++...+..  +.-.+  .+...+ .
T Consensus        51 ~~~~~~~~vLDig~G~G~~~~~~a~~~----~----~~~v~~vDi~~~~~~~a~~n~~~~~~~~~i~~~~~~~~~~~~~~  122 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKF----F----NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEG  122 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHH----H----CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCS
T ss_pred             HCCCCCCEEEEEECCHHHHHHHHHHHC----C----CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCC
T ss_conf             457898989994074439999999977----9----98799998863112467766886066517998521101213576


Q ss_pred             CCEEEEEE
Q ss_conf             95699981
Q gi|254780410|r  149 GFTFLVAN  156 (362)
Q Consensus       149 ~~~iiiaN  156 (362)
                      ...+|+||
T Consensus       123 ~fD~Iv~N  130 (230)
T 3evz_A          123 TFDVIFSA  130 (230)
T ss_dssp             CEEEEEEC
T ss_pred             CCCEEEEC
T ss_conf             52489989


No 89 
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=94.46  E-value=0.13  Score=29.65  Aligned_cols=57  Identities=18%  Similarity=0.241  Sum_probs=39.2

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC
Q ss_conf             3888762141007864689888799997418564301210236369789999986411102--310110
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY  140 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~  140 (362)
                      +.-...-.|+|+|+|+|.++.-+++    .      .-+.+.||.|+...+.-++++..++  +++.++
T Consensus        29 l~~~~g~~VLDiGcG~G~~s~~la~----~------~~~V~avD~~~~~~~~a~~~~~~~gl~~~v~~~   87 (192)
T 1l3i_A           29 AEPGKNDVAVDVGCGTGGVTLELAG----R------VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM   87 (192)
T ss_dssp             HCCCTTCEEEEESCTTSHHHHHHHT----T------SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred             CCCCCCCEEEEEECCHHHHHHHHHH----C------CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             6999979999983870499999984----3------999999990628899999999980999888999


No 90 
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum 3D7}
Probab=94.44  E-value=0.039  Score=33.20  Aligned_cols=92  Identities=17%  Similarity=0.156  Sum_probs=52.7

Q ss_pred             HCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHH
Q ss_conf             10898786468988888888645767117999999999999999838887621410078646898887999974185643
Q gi|254780410|r   29 VADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFF  108 (362)
Q Consensus        29 Ly~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~  108 (362)
                      .|=|+.=|--..-++|. |-++.+|.+.       |..+..+..++ .| .-.|+|+|+|+|.++.=+........   .
T Consensus        41 ~Fv~~~aY~D~~l~i~~-~~tis~P~~~-------A~~l~~L~~~l-~~-g~~VLeIGtGsGY~ta~la~~~~~l~---~  107 (227)
T 2pbf_A           41 KYIKEIPYIDTPVYISH-GVTISAPHMH-------ALSLKRLINVL-KP-GSRAIDVGSGSGYLTVCMAIKMNVLE---N  107 (227)
T ss_dssp             GTCSSSTTSSSCEEEET-TEEECCHHHH-------HHHHHHHTTTS-CT-TCEEEEESCTTSHHHHHHHHHTTTTT---C
T ss_pred             HCCCHHCCCCCCCCCCC-CCEECHHHHH-------HHHHHHHHHHC-CC-CCEEEEECCCCCHHHHHHHHHHHHHC---C
T ss_conf             76940128998835789-9785578999-------99999878647-99-88699837997399999999976522---4


Q ss_pred             HCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             0121023636978999998641110
Q gi|254780410|r  109 SVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus       109 ~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      ..-..+-||.++.|.+.-++++...
T Consensus       108 ~~g~V~~iE~~~~l~~~a~~~l~~~  132 (227)
T 2pbf_A          108 KNSYVIGLERVKDLVNFSLENIKRD  132 (227)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHHC
T ss_conf             5653899970599999999999851


No 91 
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.41  E-value=0.058  Score=32.00  Aligned_cols=53  Identities=13%  Similarity=0.125  Sum_probs=37.4

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCH
Q ss_conf             88762141007864689888799997418564301210236369789999986411102310
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKI  137 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v  137 (362)
                      .+..-.|+|+|.|.|.++.-+++    ..|     -+++.||.||.+.+.-+++......++
T Consensus        58 ~~~g~rVLeiG~G~G~~a~~la~----~~~-----~~vt~id~s~~~l~~a~~~~~~~~~~~  110 (236)
T 1zx0_A           58 SSKGGRVLEVGFGMAIAASKVQE----API-----DEHWIIECNDGVFQRLRDWAPRQTHKV  110 (236)
T ss_dssp             TTTCEEEEEECCTTSHHHHHHHT----SCE-----EEEEEEECCHHHHHHHHHHGGGCSSEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----CCC-----CEEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf             44898499988885099999997----299-----779998089899999999887558862


No 92 
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=94.37  E-value=0.046  Score=32.70  Aligned_cols=69  Identities=17%  Similarity=0.169  Sum_probs=46.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             76711799999999999999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|--|.+=     ..+..-.+.++....-.|+++|+|+|+.+..+.+.+.   |    .-+++.||.|+.+.+.-+++..
T Consensus        56 ~p~rskla-----aai~~~l~~l~lkpG~~VLDlG~G~G~~~~~la~~vg---~----~G~V~aVD~s~~~l~~a~~~a~  123 (233)
T 2ipx_A           56 NPFRSKLA-----AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVG---P----DGLVYAVEFSHRSGRDLINLAK  123 (233)
T ss_dssp             CTTTCHHH-----HHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHC---T----TCEEEEECCCHHHHHHHHHHHH
T ss_pred             CCCCCHHH-----HHHHHCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHH
T ss_conf             78612999-----9998455525999999999965768989999999859---9----9679999799999999999755


Q ss_pred             H
Q ss_conf             1
Q gi|254780410|r  132 S  132 (362)
Q Consensus       132 ~  132 (362)
                      .
T Consensus       124 ~  124 (233)
T 2ipx_A          124 K  124 (233)
T ss_dssp             H
T ss_pred             H
T ss_conf             1


No 93 
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=94.35  E-value=0.12  Score=29.95  Aligned_cols=46  Identities=22%  Similarity=0.369  Sum_probs=33.6

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             88762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|..-.|+|+|+|+|.++..++.    .      -.+++-||.|+.+.+.-++++.
T Consensus        41 l~~~~~VLDvGCG~G~~~~~l~~----~------g~~v~gvD~s~~~i~~a~~~~~   86 (211)
T 3e23_A           41 LPAGAKILELGCGAGYQAEAMLA----A------GFDVDATDGSPELAAEASRRLG   86 (211)
T ss_dssp             SCTTCEEEESSCTTSHHHHHHHH----T------TCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----C------CCCEEEEECCHHHHHHHHHHCC
T ss_conf             89989899986888699999997----5------9923234146999999998608


No 94 
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=94.32  E-value=0.13  Score=29.69  Aligned_cols=54  Identities=15%  Similarity=0.090  Sum_probs=36.4

Q ss_pred             HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             99998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   69 CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        69 ~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      ..+.....| +-.|+|+|.|+|..+.-+.    +.      -.+++-++.|+...+..+++....
T Consensus        58 ~~~~~~~~~-~~rVLdlGCG~G~~~~~la----~~------g~~V~giD~S~~ai~~a~~~~~~~  111 (235)
T 3lcc_A           58 HLVDTSSLP-LGRALVPGCGGGHDVVAMA----SP------ERFVVGLDISESALAKANETYGSS  111 (235)
T ss_dssp             HHHHTTCSC-CEEEEEETCTTCHHHHHHC----BT------TEEEEEECSCHHHHHHHHHHHTTS
T ss_pred             HHHHHCCCC-CCCEEEECCCCCHHHHHHH----HC------CCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             999857999-9948994388878999998----66------987999746699999999987641


No 95 
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.30  E-value=0.12  Score=29.76  Aligned_cols=65  Identities=15%  Similarity=0.123  Sum_probs=42.2

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             64576711799999999999999983888762141007864689888799997418564301210236369789999986
Q gi|254780410|r   49 FVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        49 F~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      ..|-|+--..|...+    ..     ..|..-.|+|+|.|+|.++..+.+.          -.+++-++.|+.+.+.-++
T Consensus        28 ~~~~~~~~~~~~~~l----~~-----~l~pg~rVLDvGCGtG~~a~~La~~----------g~~V~giD~S~~mi~~Ar~   88 (226)
T 3m33_A           28 VLSGPDPELTFDLWL----SR-----LLTPQTRVLEAGCGHGPDAARFGPQ----------AARWAAYDFSPELLKLARA   88 (226)
T ss_dssp             EESSSCTTHHHHHHH----HH-----HCCTTCEEEEESCTTSHHHHHHGGG----------SSEEEEEESCHHHHHHHHH
T ss_pred             HCCCCCHHHHHHHHH----HH-----HCCCCCEEEEECCCCCHHHHHHHCC----------CCEEEECCCCHHHHHHHHH
T ss_conf             505988679999999----95-----1899997999884658645777516----------8689965799999999998


Q ss_pred             HHHH
Q ss_conf             4111
Q gi|254780410|r  129 QLAS  132 (362)
Q Consensus       129 ~l~~  132 (362)
                      +.++
T Consensus        89 ~~~~   92 (226)
T 3m33_A           89 NAPH   92 (226)
T ss_dssp             HCTT
T ss_pred             HCCC
T ss_conf             5899


No 96 
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=94.26  E-value=0.067  Score=31.58  Aligned_cols=77  Identities=10%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC--CCHHHCCCC-CEEEE
Q ss_conf             762141007864689888799997418564301210236369789999986411102310110--434444569-56999
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY--TSLADVPLG-FTFLV  154 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~--~~l~~~~~~-~~iii  154 (362)
                      .+-.|+|+|.|.|.++..+++.    .|+    .+++-++.|+.+.+.-++++...+..+.+.  ......+.+ ..+|+
T Consensus        49 ~~~~VLDiGCG~G~~~~~la~~----~p~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~  120 (200)
T 3fzg_A           49 HVSSILDFGCGFNPLALYQWNE----NEK----IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVF  120 (200)
T ss_dssp             CCSEEEEETCTTHHHHHHHHCS----SCC----CEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCEEE
T ss_conf             9987999588678779999987----899----78999859999999998510232885156651013334478969898


Q ss_pred             EECCCCCC
Q ss_conf             81228875
Q gi|254780410|r  155 ANEFFDSL  162 (362)
Q Consensus       155 aNE~lDAl  162 (362)
                      ++.++--+
T Consensus       121 ~~~~l~~~  128 (200)
T 3fzg_A          121 LLKMLPVL  128 (200)
T ss_dssp             EETCHHHH
T ss_pred             ECCCHHCC
T ss_conf             73833237


No 97 
>3b3f_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, catalytic domain, alternative splicing, chromatin regulator; HET: SAH; 2.20A {Rattus norvegicus} PDB: 3b3g_A 2v74_B* 2v7e_A
Probab=94.20  E-value=0.21  Score=28.22  Aligned_cols=75  Identities=20%  Similarity=0.260  Sum_probs=46.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCHHCCC-CHHHC--CCCCEEE
Q ss_conf             621410078646898887999974185643012102363697899999864111--023101104-34444--5695699
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS--YGDKINWYT-SLADV--PLGFTFL  153 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~--~~~~v~w~~-~l~~~--~~~~~ii  153 (362)
                      .-.|+|+|+|+|.|+.-..+    .     ..-..+.+|.|+.. +..++.+..  +.++|.++. +..++  |....+|
T Consensus        47 ~~~VLDiGcG~G~ls~~aa~----~-----Ga~~V~~~e~s~~~-~~~~~~~~~n~~~~~I~~i~~~~~~l~l~~~~Dvi  116 (341)
T 3b3f_A           47 DKIVLDVGCGSGILSFFAAQ----A-----GARKIYAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDII  116 (341)
T ss_dssp             TCEEEEESCTTSHHHHHHHH----T-----TCSEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHH----C-----CCCEEEEEECCHHH-HHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCEE
T ss_conf             79899966685399999997----6-----99989999790999-99999999859986400796036652567663379


Q ss_pred             EEECCCCCCCE
Q ss_conf             98122887523
Q gi|254780410|r  154 VANEFFDSLPI  164 (362)
Q Consensus       154 iaNE~lDAlPv  164 (362)
                      +| |+++++..
T Consensus       117 vs-e~~~~~l~  126 (341)
T 3b3f_A          117 IS-EPMGYMLF  126 (341)
T ss_dssp             EC-CCCBTTBT
T ss_pred             EE-ECCCCCCC
T ss_conf             87-50111244


No 98 
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.12  E-value=0.12  Score=29.87  Aligned_cols=71  Identities=24%  Similarity=0.292  Sum_probs=46.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC--CCCHHCCC-CHHHCC----C-C
Q ss_conf             76214100786468988879999741856430121023636978999998641110--23101104-344445----6-9
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY--GDKINWYT-SLADVP----L-G  149 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~--~~~v~w~~-~l~~~~----~-~  149 (362)
                      ++..|+|+|+|+|.++.-+.    +. +    ..+++.||.++...+.-++++...  .++|.++. ++.+++    . .
T Consensus        49 ~~~~vLDlG~G~G~~~l~la----~~-~----~~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~~~~~~~~~~~~  119 (259)
T 3lpm_A           49 RKGKIIDLCSGNGIIPLLLS----TR-T----KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER  119 (259)
T ss_dssp             SCCEEEETTCTTTHHHHHHH----TT-C----CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred             CCCEEEEEECCCCHHHHHHH----HC-C----CCEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHCCCCCC
T ss_conf             79979997258589999998----67-8----988999999899999999999860733011233001110001035542


Q ss_pred             CEEEEEEC
Q ss_conf             56999812
Q gi|254780410|r  150 FTFLVANE  157 (362)
Q Consensus       150 ~~iiiaNE  157 (362)
                      +.+|++|-
T Consensus       120 fD~Iv~NP  127 (259)
T 3lpm_A          120 ADIVTCNP  127 (259)
T ss_dssp             EEEEEECC
T ss_pred             CCEEEECC
T ss_conf             54788578


No 99 
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=94.02  E-value=0.18  Score=28.66  Aligned_cols=101  Identities=14%  Similarity=0.231  Sum_probs=61.3

Q ss_pred             CCCCCCCCCCCCCCCC-CCCEEECCCC-CHHHHHHHHH------------HHHHHHHHCCCCCCCEEEEECCCCHHHHHH
Q ss_conf             0898786468988888-8886457671-1799999999------------999999983888762141007864689888
Q gi|254780410|r   30 ADPEFGYYSTCNPFGA-VGDFVTAPEI-SQIFGEMLAI------------FLICAWEQHGFPSCVRLVELGPGRGIMMLD   95 (362)
Q Consensus        30 y~p~~GYY~~~~~~G~-~GDF~Tsp~i-s~~Fg~~ia~------------~~~~~~~~~~~p~~~~ivE~GaG~G~La~d   95 (362)
                      ++-.+|++.-.+.+|+ .|+-+++-.+ -|...+.+..            =+..+...++....-.|+|+|.|+|.|+..
T Consensus        29 ~~t~~G~~~h~~iig~~~G~~v~~~~~~~p~~~d~~~~~~~r~~qiiypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~  108 (248)
T 2yvl_A           29 LSVKKSVLKFDEVIGKPEGVKINGFEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAV  108 (248)
T ss_dssp             EEETTEEEEGGGTTTCCTTEEETTEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHH
T ss_pred             EEECCEEEEHHHHCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
T ss_conf             98688698889946999986898899987980899845488887406789999999982899999799737431199999


Q ss_pred             HHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC
Q ss_conf             799997418564301210236369789999986411102--310110
Q gi|254780410|r   96 ILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY  140 (362)
Q Consensus        96 iL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~  140 (362)
                      +.+.          ..+.+-+|.++...+.-++++..++  ++|.++
T Consensus       109 La~~----------~g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~  145 (248)
T 2yvl_A          109 LSEV----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFF  145 (248)
T ss_dssp             HHHH----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred             HHHC----------CCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             9860----------787999828899999999989970057705999


No 100
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=93.91  E-value=0.23  Score=27.87  Aligned_cols=78  Identities=10%  Similarity=0.079  Sum_probs=53.6

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH-----HHCCCEEEEECC
Q ss_conf             888864576711799999999999999983888762141007864689888799997418564-----301210236369
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDF-----FSVLSIYMVETS  119 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~-----~~~l~~~ivE~s  119 (362)
                      ..|-|+|-++|..+.        +++.   .......|++..+|+|.|...+.+.+.......     ....+++-+|.+
T Consensus       149 ~~GqffTP~~Iv~~m--------v~ll---~~~~~~~IlDPacGsG~fL~~~~~~~~~~~~~~~~~~~~~~~~i~G~e~~  217 (445)
T 2okc_A          149 GAGQYFTPRPLIQAM--------VDCI---NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT  217 (445)
T ss_dssp             CCGGGCCCHHHHHHH--------HHHH---CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred             CCCEECCCHHHHHHH--------HHHC---CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCEECEECC
T ss_conf             380465989999999--------9760---79999978127889766599999999873122777755301014234120


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             78999998641110
Q gi|254780410|r  120 ERLTLIQKKQLASY  133 (362)
Q Consensus       120 ~~l~~~Q~~~l~~~  133 (362)
                      +......+.++.-+
T Consensus       218 ~~~~~la~~nl~l~  231 (445)
T 2okc_A          218 PLVVTLASMNLYLH  231 (445)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCC
T ss_conf             99999999623102


No 101
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=93.84  E-value=0.2  Score=28.35  Aligned_cols=50  Identities=18%  Similarity=0.306  Sum_probs=34.7

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHC
Q ss_conf             6214100786468988879999741856430121023636978999998641110231011
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINW  139 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w  139 (362)
                      .-.|+|+|+|+|.++..+.    +       ..+++-+|+|+.+.+.-+++..+...++.+
T Consensus        34 ~~~VLD~GCG~G~~~~~la----~-------~~~v~giD~s~~~l~~a~~~~~~~~~~i~~   83 (243)
T 3d2l_A           34 GKRIADIGCGTGTATLLLA----D-------HYEVTGVDLSEEMLEIAQEKAMETNRHVDF   83 (243)
T ss_dssp             TCEEEEESCTTCHHHHHHT----T-------TSEEEEEESCHHHHHHHHHHHHHTTCCCEE
T ss_pred             CCEEEEECCCCCHHHHHHH----H-------CCEEEEEECCHHHHHHHHHHHHHCCCEEEE
T ss_conf             9999996887879999986----1-------857999988518899988765301202331


No 102
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661}
Probab=93.79  E-value=0.22  Score=28.07  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=49.5

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHH
Q ss_conf             88888886457671179999999999999998388876214100786468988879999741856430121023636978
Q gi|254780410|r   42 PFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSER  121 (362)
Q Consensus        42 ~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~  121 (362)
                      ++| .|-.+.+|++       .|    .+++.+.....-.|+|+|+|+|.+++-+-+-..       ..-..+.+|.++.
T Consensus        53 ~i~-~~~~i~~P~~-------~a----~~l~~l~l~~g~~VLeIGtGsGY~ta~la~l~g-------~~g~V~~iE~~~~  113 (215)
T 2yxe_A           53 EIG-YGQTISAIHM-------VG----MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVG-------EDGLVVSIERIPE  113 (215)
T ss_dssp             EEE-TTEEECCHHH-------HH----HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC-------TTSEEEEEESCHH
T ss_pred             CCC-CCCCCCCHHH-------HH----HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHC-------CCCEEEEEECCHH
T ss_conf             578-8861287799-------99----999863589998899827884199999999848-------8871899952889


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999986411102
Q gi|254780410|r  122 LTLIQKKQLASYG  134 (362)
Q Consensus       122 l~~~Q~~~l~~~~  134 (362)
                      +.+.-++++...+
T Consensus       114 l~~~a~~~l~~~~  126 (215)
T 2yxe_A          114 LAEKAERTLRKLG  126 (215)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCC
T ss_conf             9999999998615


No 103
>2yxd_A Probable cobalt-precorrin-6Y C(15)- methyltransferase [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=93.76  E-value=0.18  Score=28.59  Aligned_cols=96  Identities=15%  Similarity=0.241  Sum_probs=57.4

Q ss_pred             CCCCEEECCCC--CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHH
Q ss_conf             88886457671--1799999999999999983888762141007864689888799997418564301210236369789
Q gi|254780410|r   45 AVGDFVTAPEI--SQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERL  122 (362)
Q Consensus        45 ~~GDF~Tsp~i--s~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l  122 (362)
                      .+.+|.+.+.+  ++-=-..+      .+..++....-.|+|+|+|+|.++..+.+.          .-+++.+|.++..
T Consensus         6 ~d~~F~~~~~~p~Tk~evR~l------~l~~L~l~~~~~VlDlg~G~G~~si~la~~----------~~~V~ave~~~~~   69 (183)
T 2yxd_A            6 PDEEFIRREGVPITKEEIRAV------SIGKLNLNKDDVVVDVGCGSGGMTVEIAKR----------CKFVYAIDYLDGA   69 (183)
T ss_dssp             CSTTSCCBTTBCCCCHHHHHH------HHHHHCCCTTCEEEEESCCCSHHHHHHHTT----------SSEEEEEECSHHH
T ss_pred             CHHHHCCCCCCCCCHHHHHHH------HHHHCCCCCCCEEEEEECCCCHHHHHHHHH----------CCEEEEEECCHHH
T ss_conf             879972689998787999999------999769989499999617476999998873----------8999999798999


Q ss_pred             HHHHHHHHHHCC-CCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEE
Q ss_conf             999986411102-310110434444569569998122887523589
Q gi|254780410|r  123 TLIQKKQLASYG-DKINWYTSLADVPLGFTFLVANEFFDSLPIKQF  167 (362)
Q Consensus       123 ~~~Q~~~l~~~~-~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~  167 (362)
                      .+.-+++...++ +++.++..      .     +.|+++.+|++++
T Consensus        70 i~~a~~n~~~~gv~nv~~i~g------~-----a~~~l~~~~~D~v  104 (183)
T 2yxd_A           70 IEVTKQNLAKFNIKNCQIIKG------R-----AEDVLDKLEFNKA  104 (183)
T ss_dssp             HHHHHHHHHHTTCCSEEEEES------C-----HHHHGGGCCCSEE
T ss_pred             HHHHHHHHHHCCCCCEEEEEC------C-----HHHHHHCCCCCEE
T ss_conf             999999999768998799946------4-----5656406998949


No 104
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=93.65  E-value=0.077  Score=31.17  Aligned_cols=75  Identities=13%  Similarity=0.105  Sum_probs=49.2

Q ss_pred             CCCEE--ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHH
Q ss_conf             88864--5767117999999999999999838887621410078646898887999974185643012102363697899
Q gi|254780410|r   46 VGDFV--TAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLT  123 (362)
Q Consensus        46 ~GDF~--Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~  123 (362)
                      +|+.|  -.|--|.+     |..+..-.+.++....-.|+++|+|+|+.+..+.+...   |    .-.++.||.|+...
T Consensus        44 ~~~~~r~w~p~rskl-----~a~i~~~l~~l~i~pG~~VLDlG~G~G~~~~~la~~vg---~----~G~V~avD~s~~~l  111 (227)
T 1g8a_A           44 EGEEYRIWNPNRSKL-----GAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVG---W----EGKIFGIEFSPRVL  111 (227)
T ss_dssp             TTEEEEECCTTTCHH-----HHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHC---T----TSEEEEEESCHHHH
T ss_pred             CCCEEEEECCCHHHH-----HHHHHCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHC---C----CCEEEEEECCHHHH
T ss_conf             881799867853689-----99997035316989999999971787889999999848---9----96699998999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999864111
Q gi|254780410|r  124 LIQKKQLAS  132 (362)
Q Consensus       124 ~~Q~~~l~~  132 (362)
                      +.-+++...
T Consensus       112 ~~l~~~~~~  120 (227)
T 1g8a_A          112 RELVPIVEE  120 (227)
T ss_dssp             HHHHHHHSS
T ss_pred             HHHHHHHHH
T ss_conf             999987876


No 105
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=93.63  E-value=0.37  Score=26.52  Aligned_cols=150  Identities=17%  Similarity=0.223  Sum_probs=73.7

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEEC
Q ss_conf             76214100786468988879999741856430121023636978999998641110231011043444456956999812
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANE  157 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE  157 (362)
                      ..-.||++|+|+|.++..+++.    .|+    ++.+.++.+. ....-++++...+           .... .-+.+..
T Consensus       169 ~~~~vlDvGgG~G~~~~~l~~~----~P~----~~~~~~Dlp~-~~~~a~~~~~~~~-----------~~~r-i~~~~~d  227 (332)
T 3i53_A          169 ALGHVVDVGGGSGGLLSALLTA----HED----LSGTVLDLQG-PASAAHRRFLDTG-----------LSGR-AQVVVGS  227 (332)
T ss_dssp             GGSEEEEETCTTSHHHHHHHHH----CTT----CEEEEEECHH-HHHHHHHHHHHTT-----------CTTT-EEEEECC
T ss_pred             CCCEEEECCCCCCHHHHHHHHH----CCC----CEEEEEECHH-HHHHHHHHHHHCC-----------CCCC-EEEECCC
T ss_conf             6747875289976999999997----899----8699997843-8999998756416-----------7874-5773375


Q ss_pred             CCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCC-HHHHHHHHHHHHHHHHCCEEE
Q ss_conf             2887523589991566468998996079535225764343223463316568411279-347899999999762057059
Q gi|254780410|r  158 FFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENS-PCRDREMQSISDRLACDGGTA  236 (362)
Q Consensus       158 ~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~-~~~~~~~~~i~~~l~~~~G~~  236 (362)
                      +||.+|.. +        ..++ +.  .    +         +   .+        ++ ......++.+.+.++. +|.+
T Consensus       228 ~~~~~p~~-~--------D~~~-~~--~----v---------l---h~--------~~d~~~~~iL~~~~~~L~p-gG~l  270 (332)
T 3i53_A          228 FFDPLPAG-A--------GGYV-LS--A----V---------L---HD--------WDDLSAVAILRRCAEAAGS-GGVV  270 (332)
T ss_dssp             TTSCCCCS-C--------SEEE-EE--S----C---------G---GG--------SCHHHHHHHHHHHHHHHTT-TCEE
T ss_pred             CCCCCCCC-C--------CEEE-EE--C----C---------C---CC--------CCHHHHHHHHHHHHHHCCC-CCEE
T ss_conf             12358998-7--------3899-72--1----4---------5---67--------8989999999999997599-9889


Q ss_pred             EEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCE
Q ss_conf             996243368588880776405767670001000345312688999999996898363323
Q gi|254780410|r  237 IVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLT  296 (362)
Q Consensus       237 L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~  296 (362)
                      +++|+=....+ .++....      .-+...|-.    .-..+.++..++++|+++....
T Consensus       271 li~d~~~~~~~-~~~~~d~------~m~~~~~g~----~rt~~e~~~ll~~aGf~~~~~~  319 (332)
T 3i53_A          271 LVIEAVAGDEH-AGTGMDL------RMLTYFGGK----ERSLAELGELAAQAGLAVRAAH  319 (332)
T ss_dssp             EEEECCCC----CCHHHHH------HHHHHHSCC----CCCHHHHHHHHHHTTEEEEEEE
T ss_pred             EEEECCCCCCC-CCCHHHH------HHHHHCCCC----CCCHHHHHHHHHHCCCEEEEEE
T ss_conf             99961679986-4204459------999865993----7899999999998799677999


No 106
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.90A {Geobacter sulfurreducens pca}
Probab=93.54  E-value=0.21  Score=28.15  Aligned_cols=73  Identities=19%  Similarity=0.289  Sum_probs=45.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      |.++|-=|++|+.. +    +...|.  +|+|+|.|.|.-+.-+.+.+   .+    .-+++.+|.++...+.-++++..
T Consensus        38 p~i~~~~g~~L~~L-~----~~~~~~--~ILEiGtg~G~st~~la~~~---~~----~g~v~~id~~~~~~~~ar~~~~~  103 (210)
T 3c3p_A           38 PIVDRQTGRLLYLL-A----RIKQPQ--LVVVPGDGLGCASWWFARAI---SI----SSRVVMIDPDRDNVEHARRMLHD  103 (210)
T ss_dssp             CCCCHHHHHHHHHH-H----HHHCCS--EEEEESCGGGHHHHHHHTTS---CT----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH-H----HHHCCC--EEEEEECCCHHHHHHHHHHC---CC----CEEEEEEECCCCHHHHHHHHHHH
T ss_conf             97898999999999-8----856809--89995081439999999975---56----81999997751037899987987


Q ss_pred             CC--CCHHC
Q ss_conf             02--31011
Q gi|254780410|r  133 YG--DKINW  139 (362)
Q Consensus       133 ~~--~~v~w  139 (362)
                      .+  ++|..
T Consensus       104 ~g~~~~i~~  112 (210)
T 3c3p_A          104 NGLIDRVEL  112 (210)
T ss_dssp             HSGGGGEEE
T ss_pred             CCCCCEEEE
T ss_conf             298732678


No 107
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=93.39  E-value=0.029  Score=34.06  Aligned_cols=80  Identities=14%  Similarity=0.054  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CCHH-HCCC-CCEE
Q ss_conf             88762141007864689888799997418564301210236369789999986411102310110-4344-4456-9569
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TSLA-DVPL-GFTF  152 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~l~-~~~~-~~~i  152 (362)
                      .|.+-.|+|+|.|.|.++..+++    ..|+    ..|+-++.|+...+.-++++.....++.+. .++. ..+. ...+
T Consensus       130 ~~~~~~vlD~GcG~G~~~~~l~~----~~~~----~~v~g~D~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~  201 (281)
T 3lcv_B          130 LPRPNTLRDLACGLNPLAAPWMG----LPAE----TVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADV  201 (281)
T ss_dssp             SCCCSEEEETTCTTGGGCCTTTT----CCTT----CEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----HCCC----CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCE
T ss_conf             89998699838988889999997----4997----749996599999999999998668873899813544076556567


Q ss_pred             EEEECCCCCCC
Q ss_conf             99812288752
Q gi|254780410|r  153 LVANEFFDSLP  163 (362)
Q Consensus       153 iiaNE~lDAlP  163 (362)
                      +++.++|..+|
T Consensus       202 v~~~~vl~hl~  212 (281)
T 3lcv_B          202 TLLLKTLPCLE  212 (281)
T ss_dssp             EEETTCHHHHH
T ss_pred             EEEHHHHHHCC
T ss_conf             76534487549


No 108
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=93.28  E-value=0.39  Score=26.31  Aligned_cols=77  Identities=14%  Similarity=0.277  Sum_probs=51.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      |.++|.=|+++.. +...   .....+-.|+|+|.|.|.-+.-+++.+.   |    .-+++.||.++...+.-++.+..
T Consensus        35 ~~~~~~~g~~l~~-La~~---~~~~~~~~vlEiGt~~G~stl~la~al~---~----~g~l~tIE~~~e~~~~Ar~~~~~  103 (221)
T 3dr5_A           35 PAPDEMTGQLLTT-LAAT---TNGNGSTGAIAITPAAGLVGLYILNGLA---D----NTTLTCIDPESEHQRQAKALFRE  103 (221)
T ss_dssp             CCCCHHHHHHHHH-HHHH---SCCTTCCEEEEESTTHHHHHHHHHHHSC---T----TSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-HHHH---HCCCCCCEEEEECCCHHHHHHHHHHHCC---C----CCEEEEEECCHHHHHHHHHHHHH
T ss_conf             9988769999999-9998---5123899899972805799999998479---9----97899998999999999999996


Q ss_pred             CC---CCHHCC
Q ss_conf             02---310110
Q gi|254780410|r  133 YG---DKINWY  140 (362)
Q Consensus       133 ~~---~~v~w~  140 (362)
                      .+   .+|..+
T Consensus       104 ag~~~~rv~~i  114 (221)
T 3dr5_A          104 AGYSPSRVRFL  114 (221)
T ss_dssp             TTCCGGGEEEE
T ss_pred             CCCCCCEEEEE
T ss_conf             68876246773


No 109
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in europe; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.25  E-value=0.45  Score=25.91  Aligned_cols=149  Identities=16%  Similarity=0.212  Sum_probs=74.1

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEE
Q ss_conf             87621410078646898887999974185643012102363697899999864111023101104344445695699981
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVAN  156 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaN  156 (362)
                      ...-.|+++|+|.|.++..+++.    .|+    ++.+.++.++ ..+.-++++.+.+           .... .-+.+.
T Consensus       181 ~~~~~vlDvG~G~G~~~~~l~~~----~P~----~~~~~~D~~~-~~~~a~~~~~~~~-----------~~~~-i~~~~~  239 (374)
T 1qzz_A          181 SAVRHVLDVGGGNGGMLAAIALR----APH----LRGTLVELAG-PAERARRRFADAG-----------LADR-VTVAEG  239 (374)
T ss_dssp             TTCCEEEEETCTTSHHHHHHHHH----CTT----CEEEEEECHH-HHHHHHHHHHHTT-----------CTTT-EEEEEC
T ss_pred             CCCCEEEEECCCCCHHHHHHHHH----CCC----EEEEEEECHH-HHHHHHHHHHHCC-----------CCCE-EEEEEC
T ss_conf             56878999799887889999997----897----2899960788-8999999988558-----------8622-788704


Q ss_pred             CCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEE
Q ss_conf             22887523589991566468998996079535225764343223463316568411279347899999999762057059
Q gi|254780410|r  157 EFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACDGGTA  236 (362)
Q Consensus       157 E~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~  236 (362)
                      .+++..|.. +        -.++ . . .    +         +   .++.       .......++.+.+.++. +|.+
T Consensus       240 d~~~~~p~~-~--------D~v~-~-~-~----v---------l---h~~~-------d~~~~~iL~~~~~~L~p-gG~l  283 (374)
T 1qzz_A          240 DFFKPLPVT-A--------DVVL-L-S-F----V---------L---LNWS-------DEDALTILRGCVRALEP-GGRL  283 (374)
T ss_dssp             CTTSCCSCC-E--------EEEE-E-E-S----C---------G---GGSC-------HHHHHHHHHHHHHHEEE-EEEE
T ss_pred             HHHHCCCCC-C--------CEEE-E-E-E----E---------E---ECCC-------HHHHHHHHHHHHHHCCC-CCEE
T ss_conf             144318987-7--------4899-8-4-2----2---------4---2389-------89999999999986298-9889


Q ss_pred             EEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC-------CCHHHHHHHHHHCCCEEECC
Q ss_conf             996243368588880776405767670001000345312-------68899999999689836332
Q gi|254780410|r  237 IVIDYGYLQSRVGDTLQAVKGHTYVSPLVNPGQADLSSH-------VDFQRLSSIAILYKLYINGL  295 (362)
Q Consensus       237 L~iDYGy~~~r~~gTLr~y~~H~~~dpl~~pG~~DITah-------VnFs~L~~~a~~~g~~~~g~  295 (362)
                      +++|+-.......            ++... -..|+.-.       -....+...++++|+++...
T Consensus       284 li~d~~~~~~~~~------------~~~~~-~~~dl~m~~~~~G~~rt~~e~~~ll~~AGf~~~~~  336 (374)
T 1qzz_A          284 LVLDRADVEGDGA------------DRFFS-TLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE  336 (374)
T ss_dssp             EEEECCH-------------------HHHH-HHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred             EEEEECCCCCCCC------------CHHHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             9998024799873------------26789-99889999857991689999999999869967699


No 110
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=93.20  E-value=0.24  Score=27.75  Aligned_cols=42  Identities=19%  Similarity=0.323  Sum_probs=29.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             6214100786468988879999741856430121023636978999998641
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      .-.|+|+|.|+|.++.-+.    ..      ..+++-||.|+...+.-++++
T Consensus        42 ~~~vLDiGCG~G~~~~~l~----~~------g~~v~GiD~s~~~i~~a~~~~   83 (240)
T 3dli_A           42 CRRVLDIGCGRGEFLELCK----EE------GIESIGVDINEDMIKFCEGKF   83 (240)
T ss_dssp             CSCEEEETCTTTHHHHHHH----HH------TCCEEEECSCHHHHHHHHTTS
T ss_pred             CCEEEEECCCCCHHHHHHH----HC------CCEEEEEECCHHHHHHHHHHC
T ss_conf             9969997387859999999----77------995999967707878876511


No 111
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxylating); porphyrin metabolism, S-adenosyl-methionine, structural genomics; 1.80A {Geobacter metallireducens gs-15}
Probab=93.14  E-value=0.25  Score=27.62  Aligned_cols=55  Identities=11%  Similarity=0.232  Sum_probs=40.1

Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .+++.+..-.|+|+|+|+|.++..+.+.    .|    ..+.+.+|.|+...+.-++++..++
T Consensus        34 ~~L~l~pg~~VLDiG~GsG~la~~~a~~----~~----~~~V~aiD~~~~~~~~a~~n~~~~g   88 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGAGSASVSIEASNL----MP----NGRIFALERNPQYLGFIRDNLKKFV   88 (204)
T ss_dssp             HHTTCCTTCEEEEETCTTCHHHHHHHHH----CT----TSEEEEEECCHHHHHHHHHHHHHHT
T ss_pred             HHCCCCCCCEEEEEEEEHHHHHHHHHHH----CC----CCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             8609999399999831078999999997----89----9679999499999999999999819


No 112
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.15A {Nostoc punctiforme pcc 73102}
Probab=93.07  E-value=0.48  Score=25.74  Aligned_cols=47  Identities=11%  Similarity=0.292  Sum_probs=31.5

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             88762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .+...+|+|+|+|+|.++..+++.    .|+    ++.+.++.++ ..+.-+++..
T Consensus       163 ~~~~~~vLDvG~G~G~~~~~l~~~----~p~----~~~~~~Dlp~-~~~~a~~~~~  209 (335)
T 2r3s_A          163 KIEPLKVLDISASHGLFGIAVAQH----NPN----AEIFGVDWAS-VLEVAKENAR  209 (335)
T ss_dssp             -CCCSEEEEETCTTCHHHHHHHHH----CTT----CEEEEEECHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHH----CCC----CCEEEECCHH-HHHHHHHHHH
T ss_conf             688987999799962999999985----898----7737744678-8899998788


No 113
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=93.04  E-value=0.24  Score=27.73  Aligned_cols=67  Identities=19%  Similarity=0.261  Sum_probs=46.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             71179999999999999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   54 EISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        54 ~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .+||.=|++|...+     +...|.  +|+|+|.|.|.-+.-+.+.+    |   ..-+++.+|.++...+..++.+...
T Consensus        41 ~i~p~~g~~L~~L~-----~~~~pk--~ILEiGt~~G~St~~la~al----~---~~g~i~tie~~~~~~~~a~~~~~~~  106 (223)
T 3duw_A           41 DVSPTQGKFLQLLV-----QIQGAR--NILEIGTLGGYSTIWLARGL----S---SGGRVVTLEASEKHADIARSNIERA  106 (223)
T ss_dssp             SCCHHHHHHHHHHH-----HHHTCS--EEEEECCTTSHHHHHHHTTC----C---SSCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHH-----HHHCCC--EEEEEECCCCHHHHHHHHHC----C---CCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             46999999999999-----974998--89998344278999999748----8---8885999944888899999999984


Q ss_pred             C
Q ss_conf             2
Q gi|254780410|r  134 G  134 (362)
Q Consensus       134 ~  134 (362)
                      +
T Consensus       107 g  107 (223)
T 3duw_A          107 N  107 (223)
T ss_dssp             T
T ss_pred             C
T ss_conf             9


No 114
>1or8_A Protein arginine N-methyltransferase 1; protein arginine methylation, adoMet-dependent methylation, transferase; HET: SAH; 2.35A {Rattus norvegicus} SCOP: c.66.1.6 PDB: 1orh_A* 1ori_A*
Probab=92.84  E-value=0.23  Score=27.92  Aligned_cols=75  Identities=12%  Similarity=0.177  Sum_probs=44.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCHHCC-CCHHHCC---CCCEEE
Q ss_conf             21410078646898887999974185643012102363697899999864111--02310110-4344445---695699
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS--YGDKINWY-TSLADVP---LGFTFL  153 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~--~~~~v~w~-~~l~~~~---~~~~ii  153 (362)
                      -.|+++|+|+|.|+.-..+    .     ..-+.+.+|.|+.. +..++.+..  +.++|.-+ .+..+++   ....+|
T Consensus        59 ~~VLDiG~G~G~ls~~aa~----~-----Ga~~V~ave~s~~~-~~a~~~~~~n~~~~~i~~~~~~~~~l~~~~~~~Dvi  128 (340)
T 1or8_A           59 KVVLDVGSGTGILCMFAAK----A-----GARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDII  128 (340)
T ss_dssp             CEEEEETCTTSHHHHHHHH----T-----TCSEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEE
T ss_pred             CEEEEECCCCCHHHHHHHH----C-----CCCEEEEECCHHHH-HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEE
T ss_conf             9799983788799999998----0-----89889996461999-999999997287832799973134303786531079


Q ss_pred             EEECCCCCCCEE
Q ss_conf             981228875235
Q gi|254780410|r  154 VANEFFDSLPIK  165 (362)
Q Consensus       154 iaNE~lDAlPv~  165 (362)
                      +| |+++....+
T Consensus       129 vs-E~~~~~l~~  139 (340)
T 1or8_A          129 IS-EWMGYCLFY  139 (340)
T ss_dssp             EE-CCCBBTBTB
T ss_pred             EE-EECHHCCCC
T ss_conf             97-501010440


No 115
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransferase posttranslational modification; 1.59A {Thermus thermophilus HB8} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=92.78  E-value=0.31  Score=27.00  Aligned_cols=61  Identities=16%  Similarity=0.226  Sum_probs=39.4

Q ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCC
Q ss_conf             999999998388876214100786468988879999741856430121023636978999998641110231
Q gi|254780410|r   65 IFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDK  136 (362)
Q Consensus        65 ~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~  136 (362)
                      +-+++...+...| .-.|+++|.|+|.|+.-..+    ..      .+.+-++.++...+.-+++....+.+
T Consensus       108 ~l~l~~l~~~~~~-g~~VLDvGcGsGiLsi~aak----~G------~~V~aiDid~~av~~a~~N~~~N~v~  168 (254)
T 2nxc_A          108 RLALKALARHLRP-GDKVLDLGTGSGVLAIAAEK----LG------GKALGVDIDPMVLPQAEANAKRNGVR  168 (254)
T ss_dssp             HHHHHHHHHHCCT-TCEEEEETCTTSHHHHHHHH----TT------CEEEEEESCGGGHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHCCC-CCEEEEECCCCCHHHHHHHH----CC------CEEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf             9999999841799-79899971777888999984----59------98999988727889999989970994


No 116
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 1f3l_A*
Probab=92.75  E-value=0.48  Score=25.69  Aligned_cols=76  Identities=17%  Similarity=0.245  Sum_probs=44.2

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH-HHHCCCCHHCC-CCHHHCC---CCCEEE
Q ss_conf             621410078646898887999974185643012102363697899999864-11102310110-4344445---695699
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ-LASYGDKINWY-TSLADVP---LGFTFL  153 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~-l~~~~~~v~w~-~~l~~~~---~~~~ii  153 (362)
                      .-.|+|+|+|+|.|+.-..+.         ...+++.||.|+......+.. -.....+|+.+ .+..+++   ....+|
T Consensus        65 ~k~VLDlGcGtG~ls~~aA~~---------Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~d~~~l~~~~~~~D~i  135 (340)
T 2fyt_A           65 DKVVLDVGCGTGILSMFAAKA---------GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI  135 (340)
T ss_dssp             TCEEEEETCTTSHHHHHHHHT---------TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCEE
T ss_conf             698999327747999999975---------99889998098999999999997454775168981488764764667689


Q ss_pred             EEECCCCCCCE
Q ss_conf             98122887523
Q gi|254780410|r  154 VANEFFDSLPI  164 (362)
Q Consensus       154 iaNE~lDAlPv  164 (362)
                      ++ |+++..+.
T Consensus       136 vs-e~~~~~~~  145 (340)
T 2fyt_A          136 IS-EWMGYFLL  145 (340)
T ss_dssp             EE-CCCBTTBT
T ss_pred             EE-ECCCEECC
T ss_conf             99-63210045


No 117
>2esr_A Methyltransferase; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes MGAS10394} SCOP: c.66.1.46
Probab=92.73  E-value=0.37  Score=26.52  Aligned_cols=68  Identities=15%  Similarity=0.251  Sum_probs=42.8

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             45767117999999999999999838887621410078646898887999974185643012102363697899999864
Q gi|254780410|r   50 VTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus        50 ~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                      .|=|..+.+-..+     .+++...  -..-.|+++|+|+|.++...+.   +      ..-+.+.||.++...+..+++
T Consensus        10 ~~RPt~~~vre~l-----fn~L~~~--~~g~~vLDl~~GsG~~~iea~~---r------~a~~v~~ve~~~~a~~~~~~n   73 (177)
T 2esr_A           10 ITRPTSDKVRGAI-----FNMIGPY--FNGGRVLDLFAGSGGLAIEAVS---R------GMSAAVLVEKNRKAQAIIQDN   73 (177)
T ss_dssp             --------CHHHH-----HHHHCSC--CCSCEEEEETCTTCHHHHHHHH---T------TCCEEEEECCCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHH-----HHHHHHH--CCCCEEEECCEEHHHHHHHHHH---C------CCCCCEEEECHHHHHHHHHHH
T ss_conf             8786848999999-----9987755--6989799995037999999997---3------862016783428899988875


Q ss_pred             HHHC
Q ss_conf             1110
Q gi|254780410|r  130 LASY  133 (362)
Q Consensus       130 l~~~  133 (362)
                      +...
T Consensus        74 ~~~~   77 (177)
T 2esr_A           74 IIMT   77 (177)
T ss_dssp             HHTT
T ss_pred             HHHH
T ss_conf             7651


No 118
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: MSE; 1.90A {Bacillus halodurans c-125}
Probab=92.68  E-value=0.47  Score=25.80  Aligned_cols=67  Identities=24%  Similarity=0.406  Sum_probs=45.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      |-+++.=|++|.. ++    .+..|.  .|+|+|.|.|.-+.-+++.+    |+    .+++.+|.++...+..++.+..
T Consensus        36 pii~~~~~~~l~~-l~----~~~~~~--~VLEIGtg~G~Stl~la~~~----p~----~~v~tiD~~~~~~~~A~~~~~~  100 (233)
T 2gpy_A           36 PIMDLLGMESLLH-LL----KMAAPA--RILEIGTAIGYSAIRMAQAL----PE----ATIVSIERDERRYEEAHKHVKA  100 (233)
T ss_dssp             CCCCHHHHHHHHH-HH----HHHCCS--EEEEECCTTSHHHHHHHHHC----TT----CEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-HH----HHHCCC--EEEEEECCCCHHHHHHHHHC----CC----CEEEEEEECHHHHHHHHHHHHH
T ss_conf             9778899999999-98----865899--89996112129999999878----99----7799997048999999999999


Q ss_pred             CC
Q ss_conf             02
Q gi|254780410|r  133 YG  134 (362)
Q Consensus       133 ~~  134 (362)
                      .+
T Consensus       101 ~g  102 (233)
T 2gpy_A          101 LG  102 (233)
T ss_dssp             TT
T ss_pred             HH
T ss_conf             74


No 119
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1- carboxylic acid, PHZM; 1.80A {Pseudomonas aeruginosa PAO1}
Probab=92.62  E-value=0.35  Score=26.68  Aligned_cols=110  Identities=18%  Similarity=0.243  Sum_probs=59.8

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEEECC
Q ss_conf             62141007864689888799997418564301210236369789999986411102310110434444569569998122
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVANEF  158 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~  158 (362)
                      .-.|+++|+|+|.++..+++.    .|+    ++.++++... ..+.-++++...+           .... .-+.+-.+
T Consensus       168 ~~~vlDvG~G~G~~~~~l~~~----~P~----l~~~~~Dlp~-~~~~a~~~~~~~~-----------~~~r-i~~~~gd~  226 (334)
T 2ip2_A          168 GRSFVDVGGGSGELTKAILQA----EPS----ARGVMLDREG-SLGVARDNLSSLL-----------AGER-VSLVGGDM  226 (334)
T ss_dssp             TCEEEEETCTTCHHHHHHHHH----CTT----CEEEEEECTT-CTHHHHHHTHHHH-----------HTTS-EEEEESCT
T ss_pred             CCEEEECCCCCCHHHHHHHHH----CCC----EEEEEECCCC-HHHHHHHHHHHCC-----------CCCE-EEEECCCH
T ss_conf             886730389876888888986----996----4999822851-1289987676507-----------7770-69971776


Q ss_pred             CCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCH-HHHHHHHHHHHHHHHCCEEEE
Q ss_conf             8875235899915664689989960795352257643432234633165684112793-478999999997620570599
Q gi|254780410|r  159 FDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSP-CRDREMQSISDRLACDGGTAI  237 (362)
Q Consensus       159 lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~-~~~~~~~~i~~~l~~~~G~~L  237 (362)
                      ||.+|.. +        -. |-+ .+               ..  .+        ++. .....++.+.+.++. +|.++
T Consensus       227 ~~~~p~~-~--------D~-v~~-~~---------------vl--h~--------~~d~~~~~iL~~~~~aL~p-gG~ll  269 (334)
T 2ip2_A          227 LQEVPSN-G--------DI-YLL-SR---------------II--GD--------LDEAASLRLLGNCREAMAG-DGRVV  269 (334)
T ss_dssp             TTCCCSS-C--------SE-EEE-ES---------------CG--GG--------CCHHHHHHHHHHHHHHSCT-TCEEE
T ss_pred             HHCCCCC-C--------CE-EEE-EE---------------EE--CC--------CCHHHHHHHHHHHHHHHCC-CCEEE
T ss_conf             5438875-7--------08-999-62---------------11--15--------8978999999999986089-97899


Q ss_pred             EECCCCCCC
Q ss_conf             962433685
Q gi|254780410|r  238 VIDYGYLQS  246 (362)
Q Consensus       238 ~iDYGy~~~  246 (362)
                      ++|+-....
T Consensus       270 i~e~~~~~~  278 (334)
T 2ip2_A          270 VIERTISAS  278 (334)
T ss_dssp             EEECCBCSS
T ss_pred             EEEEECCCC
T ss_conf             998504899


No 120
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} PDB: 1kpi_A*
Probab=92.53  E-value=0.56  Score=25.24  Aligned_cols=210  Identities=11%  Similarity=0.129  Sum_probs=101.2

Q ss_pred             HHHHCCCCCHHHHHHHHHCCCCC----CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
Q ss_conf             99818980499999987108987----86468988888888645767117999999999999999838887621410078
Q gi|254780410|r   12 LIKKNGQMTVDQYFALCVADPEF----GYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGP   87 (362)
Q Consensus        12 ~I~~~G~i~f~~fM~~aLy~p~~----GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~Ga   87 (362)
                      .|+++=-++ .+|.+.+| +|..    |||.+.+             - .+ -++=-+-+-.+.+.++....-.|+|+|.
T Consensus        19 ~i~~HYD~~-n~fy~~~L-d~~~~YSc~~~~~~~-------------~-tL-~~AQ~~k~~~~~~~l~l~~g~rVLDiGC   81 (302)
T 3hem_A           19 AVRSHYDKS-NEFFKLWL-DPSMTYSCAYFERPD-------------M-TL-EEAQYAKRKLALDKLNLEPGMTLLDIGC   81 (302)
T ss_dssp             HHHHHHTSC-HHHHHHHS-CTTCCCSCCCCSSTT-------------C-CH-HHHHHHHHHHHHHTTCCCTTCEEEEETC
T ss_pred             HHHHHCCCC-HHHHHHHC-CCCCCEEEEEECCCC-------------C-CH-HHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf             898856787-89999857-999876425737999-------------9-99-9999999999999708999898988578


Q ss_pred             CCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC-CCHHHCCCCCEEEEEECCCCCCCE
Q ss_conf             64689888799997418564301210236369789999986411102--310110-434444569569998122887523
Q gi|254780410|r   88 GRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY-TSLADVPLGFTFLVANEFFDSLPI  164 (362)
Q Consensus        88 G~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~-~~l~~~~~~~~iiiaNE~lDAlPv  164 (362)
                      |-|.+|.-+.+..         -.+..-+..|+...+.-+++..+.+  ++|... .+..+.+.....|+|-|.|+.+|-
T Consensus        82 GwG~~a~~~a~~~---------g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~~~~~d~~~~~~~fD~ivSie~~EHv~~  152 (302)
T 3hem_A           82 GWGSTMRHAVAEY---------DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHFAD  152 (302)
T ss_dssp             TTSHHHHHHHHHH---------CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGTTC
T ss_pred             CCCHHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
T ss_conf             8539999999986---------9838998377889999999998740021233444043234788675531156887312


Q ss_pred             EEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf             58999156646899899607953522576434322346331656841127934789999999976205705999624336
Q gi|254780410|r  165 KQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACDGGTAIVIDYGYL  244 (362)
Q Consensus       165 ~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L~iDYGy~  244 (362)
                                                               .   ...........+++.+.+.|+. +|.+++=+.+..
T Consensus       153 -----------------------------------------~---~~~~~~~~~~~~f~~i~~~LkP-gG~~~l~~i~~~  187 (302)
T 3hem_A          153 -----------------------------------------G---AGDAGFERYDTFFKKFYNLTPD-DGRMLLHTITIP  187 (302)
T ss_dssp             -----------------------------------------C---SSCCCTTHHHHHHHHHHHSSCT-TCEEEEEEEECC
T ss_pred             -----------------------------------------H---HCCHHHHHHHHHHHHHHHHCCC-CCEEEEEEEECC
T ss_conf             -----------------------------------------2---1012688999999999985699-874999999457


Q ss_pred             CCCC----C-CEEEEECCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCE
Q ss_conf             8588----8-807764057-67670001000345312688999999996898363323
Q gi|254780410|r  245 QSRV----G-DTLQAVKGH-TYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGLT  296 (362)
Q Consensus       245 ~~r~----~-gTLr~y~~H-~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~~  296 (362)
                      ....    + .+-..+.+. ....-...||.. +.   ..+.+...++++|+++....
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~fi~kyiFpgg~-lp---s~~~~~~~~~~~gf~v~~~~  241 (302)
T 3hem_A          188 DKEEAQELGLTSPMSLLRFIKFILTEIFPGGR-LP---RISQVDYYSSNAGWKVERYH  241 (302)
T ss_dssp             CHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCC-CC---CHHHHHHHHHHHTCEEEEEE
T ss_pred             CCHHHHHCCCCCHHHHHCCCHHHHHHCCCCCC-CC---CHHHHHHHHCCCCEEEEEEE
T ss_conf             82121103678867753332156520368667-89---78999865223866999999


No 121
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=92.53  E-value=0.56  Score=25.24  Aligned_cols=173  Identities=12%  Similarity=0.095  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCH
Q ss_conf             999999999999983888762141007864689888799997418564301210236369789999986411102--310
Q gi|254780410|r   60 GEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKI  137 (362)
Q Consensus        60 g~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v  137 (362)
                      .++-.+-+..+.+.++....-+|+|+|.|-|.+|.-+.+.         .-.+..-+..|+...+.-+++..+.+  +++
T Consensus        46 ~eAQ~~k~~~l~~~l~l~~G~~VLDiGCG~G~~a~~~A~~---------~g~~v~git~s~~q~~~a~~~~~~~~~~~~~  116 (287)
T 1kpg_A           46 QEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEK---------YDVNVVGLTLSKNQANHVQQLVANSENLRSK  116 (287)
T ss_dssp             HHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHH---------HCCEEEEEESCHHHHHHHHHHHHTCCCCSCE
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH---------CCCCEEEEECCHHHHHHHHHHHHHHCCCCHH
T ss_conf             9999999999999719999998999688525999999996---------7984699968999999999998761454015


Q ss_pred             HCC-CCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCH
Q ss_conf             110-4344445695699981228875235899915664689989960795352257643432234633165684112793
Q gi|254780410|r  138 NWY-TSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSP  216 (362)
Q Consensus       138 ~w~-~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~  216 (362)
                      .+. .+..+.+....-|+|-|.|..+|                                                   ..
T Consensus       117 ~~~~~d~~~~~~~fD~i~si~~~eh~~---------------------------------------------------~~  145 (287)
T 1kpg_A          117 RVLLAGWEQFDEPVDRIVSIGAFEHFG---------------------------------------------------HE  145 (287)
T ss_dssp             EEEESCGGGCCCCCSEEEEESCGGGTC---------------------------------------------------TT
T ss_pred             HHHHHHHHHCCCCCCCEEEEHHHHHCC---------------------------------------------------HH
T ss_conf             788743664137764055532277507---------------------------------------------------47


Q ss_pred             HHHHHHHHHHHHHHHCCEEEEEECCCCCCC---CCCCEEEEECCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             478999999997620570599962433685---8888077640576767---0001000345312688999999996898
Q gi|254780410|r  217 CRDREMQSISDRLACDGGTAIVIDYGYLQS---RVGDTLQAVKGHTYVS---PLVNPGQADLSSHVDFQRLSSIAILYKL  290 (362)
Q Consensus       217 ~~~~~~~~i~~~l~~~~G~~L~iDYGy~~~---r~~gTLr~y~~H~~~d---pl~~pG~~DITahVnFs~L~~~a~~~g~  290 (362)
                      ....+++.+...|+. +|.+++-+-+...+   ...++.......+..+   -...||. .+.+   ...+...++++|+
T Consensus       146 ~~~~~~~~~~r~Lkp-gG~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~fi~k~ifpgg-~lps---l~~~~~~~~~aGf  220 (287)
T 1kpg_A          146 RYDAFFSLAHRLLPA-DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGG-RLPS---IPMVQECASANGF  220 (287)
T ss_dssp             THHHHHHHHHHHSCT-TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTC-CCCC---HHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHCCC-CCEEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCC---HHHHHHHHHHCCC
T ss_conf             799999999974699-9729999997468344432157643344215456632216888-7897---6999999986286


Q ss_pred             EEECCEE
Q ss_conf             3633233
Q gi|254780410|r  291 YINGLTT  297 (362)
Q Consensus       291 ~~~g~~s  297 (362)
                      ++....+
T Consensus       221 ~v~~~~~  227 (287)
T 1kpg_A          221 TVTRVQS  227 (287)
T ss_dssp             EEEEEEE
T ss_pred             EEEEECC
T ss_conf             8865314


No 122
>3hvi_A Catechol O-methyltransferase; neurotransmitter degradation, alternative initiation, catecholamine metabolism, cell membrane, cytoplasm; HET: 619; 1.20A {Rattus norvegicus} PDB: 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 2zlb_A 2zth_A* 2zvj_A* 3a7d_A* 3bwm_A* 3bwy_A* 3a7e_A*
Probab=92.52  E-value=0.27  Score=27.42  Aligned_cols=73  Identities=19%  Similarity=0.302  Sum_probs=48.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +.++|.=|++|...+..     ..|  -+|+|+|.|.|.-+.-+.+.+   .+    .-+++.+|.++...+..++.+..
T Consensus        40 ~~i~~~~g~~L~~lv~~-----~kp--k~iLEiGt~~G~Stl~la~al---~~----~g~v~~id~~~~~~~~ar~~~~~  105 (221)
T 3hvi_A           40 MNVGDAKGQIMDAVIRE-----YSP--SLVLELGAYCGYSAVRMARLL---QP----GARLLTMEMNPDYAAITQQMLNF  105 (221)
T ss_dssp             CCCHHHHHHHHHHHHHH-----HCC--SEEEEECCTTSHHHHHHHTTC---CT----TCEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-----CCC--CEEEEEECCCHHHHHHHHHHC---CC----CCEEEEEECCCHHHHHHHHHHHH
T ss_conf             65089999999999986-----199--999997147429999999857---99----97899998884125899999997


Q ss_pred             CC--CCHHC
Q ss_conf             02--31011
Q gi|254780410|r  133 YG--DKINW  139 (362)
Q Consensus       133 ~~--~~v~w  139 (362)
                      .+  ++|..
T Consensus       106 agl~~~I~l  114 (221)
T 3hvi_A          106 AGLQDKVTI  114 (221)
T ss_dssp             HTCTTTEEE
T ss_pred             CCCCCCEEE
T ss_conf             599774158


No 123
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=92.38  E-value=0.5  Score=25.60  Aligned_cols=114  Identities=19%  Similarity=0.342  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEE
Q ss_conf             88876214100786468988879999741856430121023636978999998641110231011043444456956999
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLV  154 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iii  154 (362)
                      .....-.||++|+|.|.++..+++.    .|+    ++...++..+.+... +++++..+           +..... +.
T Consensus       180 ~~~~~~~vlDvGgG~G~~~~~l~~~----~p~----~~~~~~D~p~~~~~a-~~~~~~~~-----------l~~ri~-~~  238 (360)
T 1tw3_A          180 DWTNVRHVLDVGGGKGGFAAAIARR----APH----VSATVLEMAGTVDTA-RSYLKDEG-----------LSDRVD-VV  238 (360)
T ss_dssp             CCTTCSEEEEETCTTSHHHHHHHHH----CTT----CEEEEEECTTHHHHH-HHHHHHTT-----------CTTTEE-EE
T ss_pred             CCCCCCEEEECCCCCCHHHHHHHHH----CCC----EEEEEEECHHHHHHH-HHHHHHCC-----------CCCCCE-EE
T ss_conf             9645757986389986889999975----894----489998884147999-99998628-----------874343-51


Q ss_pred             EECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCE
Q ss_conf             81228875235899915664689989960795352257643432234633165684112793478999999997620570
Q gi|254780410|r  155 ANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLACDGG  234 (362)
Q Consensus       155 aNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G  234 (362)
                      +--|||..|.. +        -.++ + .+     +         +   .++.+       ......++.+.+.++. +|
T Consensus       239 ~~d~~~~~p~~-~--------D~v~-~-~~-----v---------l---h~~~d-------~~~~~iL~~~~~aL~p-gg  282 (360)
T 1tw3_A          239 EGDFFEPLPRK-A--------DAII-L-SF-----V---------L---LNWPD-------HDAVRILTRCAEALEP-GG  282 (360)
T ss_dssp             ECCTTSCCSSC-E--------EEEE-E-ES-----C---------G---GGSCH-------HHHHHHHHHHHHTEEE-EE
T ss_pred             CCCHHHCCCCC-C--------CEEE-E-EE-----E---------E---ECCCH-------HHHHHHHHHHHHHHCC-CC
T ss_conf             37675427876-7--------4898-7-34-----7---------7---53987-------9999999999997199-83


Q ss_pred             EEEEECCCCCC
Q ss_conf             59996243368
Q gi|254780410|r  235 TAIVIDYGYLQ  245 (362)
Q Consensus       235 ~~L~iDYGy~~  245 (362)
                      .++++|+-..+
T Consensus       283 ~lli~e~~~~~  293 (360)
T 1tw3_A          283 RILIHERDDLH  293 (360)
T ss_dssp             EEEEEECCBCG
T ss_pred             EEEEEECCCCC
T ss_conf             89999724689


No 124
>1nw3_A Histone methyltransferase DOT1L; HDOT1, histone lysine methyltransferase,; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.31
Probab=92.34  E-value=0.093  Score=30.59  Aligned_cols=72  Identities=15%  Similarity=0.195  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHH
Q ss_conf             99999999999999838887621410078646898887999974185643012102363697899999864111023101
Q gi|254780410|r   59 FGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKIN  138 (362)
Q Consensus        59 Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~  138 (362)
                      +|++-...+..+.+.++....-.++++|.|.|.++..+....        ..-..+-||+|+.+.+.-++....+...+.
T Consensus       136 ~~e~~~~~~~~i~~~~~l~~~~~~~DiG~G~G~~~~~~a~~~--------~~~~~~Giei~~~~~~~A~~~~~~~~~~~~  207 (416)
T 1nw3_A          136 YGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT--------NCKHHYGVEKADIPAKYAETMDREFRKWMK  207 (416)
T ss_dssp             CCCCCHHHHHHHHHHSCCCTTCEEEEETCTTSHHHHHHHHHC--------CCSEEEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf             324409999999997089999889966888888999999976--------998899997999999999999999988777


No 125
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=92.29  E-value=0.35  Score=26.63  Aligned_cols=57  Identities=14%  Similarity=-0.034  Sum_probs=43.0

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             9999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   67 LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        67 ~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +.+.|..++.+..-+|+|+|.|.|.++.-+.+.          -.+++-++.|+...+.-+++....
T Consensus        11 ~~~~~~~l~~~~g~rVLD~GCG~G~~~~~La~~----------g~~v~gvD~S~~~i~~a~~~~~~~   67 (203)
T 1pjz_A           11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ----------GYHVVGAELSEAAVERYFTERGEQ   67 (203)
T ss_dssp             HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH----------CCEEEEEEECHHHHHHHHHHHCSC
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC----------CCEEEEECCCHHHHHHHHHHHCCC
T ss_conf             999999649999997999737898889999967----------987788526599999999972345


No 126
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase- like protein, methyltransferase domain; 1.85A {Lactobacillus casei atcc 334}
Probab=92.27  E-value=0.61  Score=25.03  Aligned_cols=173  Identities=11%  Similarity=0.024  Sum_probs=84.2

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHH------HHHHHHHHHHHC--CCCHHC
Q ss_conf             999998388876214100786468988879999741856430121023636978------999998641110--231011
Q gi|254780410|r   68 ICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSER------LTLIQKKQLASY--GDKINW  139 (362)
Q Consensus        68 ~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~------l~~~Q~~~l~~~--~~~v~w  139 (362)
                      ..+.+.++.+..-.|+|+|.|.|.++..+.+.+   .|    ..+++-|+.|+.      +.+.-+++....  .+++.+
T Consensus        33 ~~ll~~~~i~pG~rVLDiGCG~G~~t~~la~~~---g~----~~~V~gvD~s~~~~~~~~~l~~A~~~~~~~~~~~~i~~  105 (275)
T 3bkx_A           33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQV---GS----SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTV  105 (275)
T ss_dssp             HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHH---CT----TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEE
T ss_pred             HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH---CC----CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             999986797986989996653885789999983---87----77523476777776666899999999885577774010


Q ss_pred             CCCHHHCCCCCEEEEEE-CCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHH
Q ss_conf             04344445695699981-22887523589991566468998996079535225764343223463316568411279347
Q gi|254780410|r  140 YTSLADVPLGFTFLVAN-EFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCR  218 (362)
Q Consensus       140 ~~~l~~~~~~~~iiiaN-E~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~  218 (362)
                                   ..++ +-.+.+|+.                  ++.+-.+.           .     ...+++.+..
T Consensus       106 -------------~~~d~~~~~~lp~~------------------~~sFD~V~-----------~-----~~~l~~~~d~  138 (275)
T 3bkx_A          106 -------------HFNTNLSDDLGPIA------------------DQHFDRVV-----------L-----AHSLWYFASA  138 (275)
T ss_dssp             -------------ECSCCTTTCCGGGT------------------TCCCSEEE-----------E-----ESCGGGSSCH
T ss_pred             -------------EHHHHHHHCCCCCC------------------CCCCCEEE-----------E-----EEEEECCCCH
T ss_conf             -------------20015440247644------------------57626897-----------8-----0163328999


Q ss_pred             HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEE--EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECC
Q ss_conf             8999999997620570599962433685888807--7640576767000100034531268899999999689836332
Q gi|254780410|r  219 DREMQSISDRLACDGGTAIVIDYGYLQSRVGDTL--QAVKGHTYVSPLVNPGQADLSSHVDFQRLSSIAILYKLYINGL  295 (362)
Q Consensus       219 ~~~~~~i~~~l~~~~G~~L~iDYGy~~~r~~gTL--r~y~~H~~~dpl~~pG~~DITahVnFs~L~~~a~~~g~~~~g~  295 (362)
                      ...++.+...++ .+|.+++.+|.........+-  +...-+.........+..+......-..+.+.+.++|+.+...
T Consensus       139 ~~~l~~~~rvLk-pGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~  216 (275)
T 3bkx_A          139 NALALLFKNMAA-VCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAG  216 (275)
T ss_dssp             HHHHHHHHHHTT-TCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEEC
T ss_pred             HHHHHHHHHHCC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             999999999768-787899996268878834536788999987776505677676557899999999999869979899


No 127
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S- adenosylmethionine-dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=92.11  E-value=0.3  Score=27.14  Aligned_cols=48  Identities=17%  Similarity=0.367  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +...++ ++|+|.|+|..+..+.+    ..|+    ..++-||+|+.....-.++..
T Consensus        39 ~~~~p~-iLEIGcG~G~~~~~lA~----~~P~----~~~igiD~~~~~v~~a~~~~~   86 (214)
T 1yzh_A           39 GNDNPI-HVEVGSGKGAFVSGMAK----QNPD----INYIGIDIQKSVLSYALDKVL   86 (214)
T ss_dssp             TSCCCE-EEEESCTTSHHHHHHHH----HCTT----SEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCCC-EEEEEEECCHHHHHHHH----HCCC----CCEEEEECCHHHHHHHHHHHH
T ss_conf             999971-89994108699999999----7899----977974077888999999999


No 128
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.00  E-value=0.3  Score=27.16  Aligned_cols=48  Identities=15%  Similarity=0.309  Sum_probs=33.6

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      .+.+ .++|+|.|+|..+..+..    ..|+    .+++-+|+|+.....-.++...
T Consensus        37 ~~~p-~vLEIGcG~G~~~~~lA~----~~p~----~~~iGiD~~~~~i~~a~~~~~~   84 (213)
T 2fca_A           37 NDNP-IHIEVGTGKGQFISGMAK----QNPD----INYIGIELFKSVIVTAVQKVKD   84 (213)
T ss_dssp             SCCC-EEEEECCTTSHHHHHHHH----HCTT----SEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCC-EEEEEECCCCHHHHHHHH----HCCC----CCEEEEECCHHHHHHHHHHHHH
T ss_conf             9995-299980358899999998----6899----8289998359999999999998


No 129
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175, PSI-2; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=91.80  E-value=0.59  Score=25.12  Aligned_cols=73  Identities=18%  Similarity=0.375  Sum_probs=44.9

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH-----HCCCCHHCCC-CH-------
Q ss_conf             8762141007864689888799997418564301210236369789999986411-----1023101104-34-------
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA-----SYGDKINWYT-SL-------  143 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~-----~~~~~v~w~~-~l-------  143 (362)
                      ...-.|+|+|+|+|.+..-+...    .|    ..+++.||.++.+.+.-++++.     .+.++++.+. ++       
T Consensus        35 ~~~~rVLDlG~G~G~i~l~La~r----~~----~~~v~gvEi~~~~~~lAr~N~~ln~~~~~~~ri~~~~~Di~~~~~~~  106 (260)
T 2ozv_A           35 DRACRIADLGAGAGAAGMAVAAR----LE----KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR  106 (260)
T ss_dssp             CSCEEEEECCSSSSHHHHHHHHH----CT----TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH
T ss_pred             CCCCEEEECCHHHHHHHHHHHHH----CC----CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCHHH
T ss_conf             89899999543676999999985----89----98899998999999999999998654433235358963321322123


Q ss_pred             --HHCC-CCCEEEEEEC
Q ss_conf             --4445-6956999812
Q gi|254780410|r  144 --ADVP-LGFTFLVANE  157 (362)
Q Consensus       144 --~~~~-~~~~iiiaNE  157 (362)
                        ..++ ....+|++|=
T Consensus       107 ~~~~~~~~~fD~VvsNP  123 (260)
T 2ozv_A          107 VEAGLPDEHFHHVIMNP  123 (260)
T ss_dssp             HHTTCCTTCEEEEEECC
T ss_pred             HHHHHCCCCCCEEEECC
T ss_conf             44331367626798669


No 130
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, coiled coil, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus dsm 4304} SCOP: c.66.1.3
Probab=91.76  E-value=0.25  Score=27.61  Aligned_cols=67  Identities=18%  Similarity=0.196  Sum_probs=41.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             76711799999999999999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|.-|.+     |..++.- ..+.....-.|+++|+|+|+++..+.+..    +    ...++-||.|+...+.-+++..
T Consensus        37 ~p~rskl-----aa~i~~~-~~l~ikpg~~VLDlG~GtG~~~~~la~~~----~----~g~V~avD~s~~~i~~a~~~a~  102 (210)
T 1nt2_A           37 VPWRSKL-----AAMILKG-HRLKLRGDERVLYLGAASGTTVSHLADIV----D----EGIIYAVEYSAKPFEKLLELVR  102 (210)
T ss_dssp             CGGGCHH-----HHHHHTS-CCCCCCSSCEEEEETCTTSHHHHHHHHHT----T----TSEEEEECCCHHHHHHHHHHHH
T ss_pred             CCCHHHH-----HHHHHCC-CCCCCCCCCEEEEECCCCCHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
T ss_conf             8625389-----9998687-76688998999995688888899999743----6----9859999699999999997786


Q ss_pred             H
Q ss_conf             1
Q gi|254780410|r  132 S  132 (362)
Q Consensus       132 ~  132 (362)
                      .
T Consensus       103 ~  103 (210)
T 1nt2_A          103 E  103 (210)
T ss_dssp             H
T ss_pred             H
T ss_conf             4


No 131
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.73  E-value=0.076  Score=31.21  Aligned_cols=60  Identities=17%  Similarity=0.214  Sum_probs=41.7

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHH
Q ss_conf             888645767117999999999999999838887621410078646898887999974185643012102363697899
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLT  123 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~  123 (362)
                      -|-|||.++|..+.        ++.   +..++...|+|.++|+|.|...+++.+..       ..+++-+|+++...
T Consensus        18 ~G~~yTP~~i~~~~--------~~~---l~~~~~~~IlDPacGsG~FL~~~~~~~~~-------~~~i~G~did~~~~   77 (421)
T 2ih2_A           18 LGRVETPPEVVDFM--------VSL---AEAPRGGRVLEPACAHGPFLRAFREAHGT-------AYRFVGVEIDPKAL   77 (421)
T ss_dssp             ---CCCCHHHHHHH--------HHH---CCCCTTCEEEEETCTTCHHHHHHHHHHCS-------CSEEEEEESCTTTC
T ss_pred             CCEECCCHHHHHHH--------HHH---CCCCCCCEEEECCCCHHHHHHHHHHHCCC-------CCEEEEEECCHHHH
T ss_conf             98788919999999--------994---78999699996877646999999986776-------78699997989999


No 132
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=91.57  E-value=0.72  Score=24.51  Aligned_cols=78  Identities=21%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC-------HHHHHCCCEEEEE
Q ss_conf             888864576711799999999999999983888762141007864689888799997418-------5643012102363
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLK-------PDFFSVLSIYMVE  117 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~-------p~~~~~l~~~ivE  117 (362)
                      +.|.|+|.++|..+.-+++            .|.+-.|++--.|+|.|.....+++.+..       .......+++=+|
T Consensus       223 ~~G~ffTP~~Iv~lmv~ll------------~p~~~~I~DPacGsGgfLi~a~~~i~~~~~~~~~~~~~~~~~~~l~G~E  290 (544)
T 3khk_A          223 QGGQYYTPKSIVTLIVEML------------EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQE  290 (544)
T ss_dssp             CSTTTCCCHHHHHHHHHHH------------CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECC
T ss_pred             CCCEECCCHHHHHHHHHCC------------CCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEECCC
T ss_conf             4765548189999998623------------8998837037777617899999999982452222202222011061503


Q ss_pred             CCHHHHHHHHHHHHHCC
Q ss_conf             69789999986411102
Q gi|254780410|r  118 TSERLTLIQKKQLASYG  134 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~~~  134 (362)
                      +++.....-+-++--++
T Consensus       291 i~~~~~~la~~nm~l~g  307 (544)
T 3khk_A          291 SNPTTWKLAAMNMVIRG  307 (544)
T ss_dssp             CCHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHCC
T ss_conf             87799999998898618


No 133
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=91.47  E-value=0.28  Score=27.32  Aligned_cols=34  Identities=38%  Similarity=0.472  Sum_probs=24.9

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             141007864689888799997418564301210236369789999986
Q gi|254780410|r   81 RLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        81 ~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      .|+|+|.|+|.++..+              .+.+-||+|+.+.+.-++
T Consensus        50 ~vLDiGcGtG~~~~~l--------------~~~~giD~s~~~i~~a~~   83 (219)
T 1vlm_A           50 RGVEIGVGTGRFAVPL--------------KIKIGVEPSERMAEIARK   83 (219)
T ss_dssp             CEEEETCTTSTTHHHH--------------TCCEEEESCHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHH--------------HHEEEEECCHHHHHHHHH
T ss_conf             0999858677999977--------------586999499999999998


No 134
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, S-adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum tls} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=91.38  E-value=0.75  Score=24.38  Aligned_cols=72  Identities=18%  Similarity=0.271  Sum_probs=41.0

Q ss_pred             ECCCCCHHHHHHHH---HHHH-HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHH
Q ss_conf             57671179999999---9999-9999838887621410078646898887999974185643012102363697899999
Q gi|254780410|r   51 TAPEISQIFGEMLA---IFLI-CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQ  126 (362)
Q Consensus        51 Tsp~is~~Fg~~ia---~~~~-~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q  126 (362)
                      ..++-...|.+..+   +... .+.+....+..-+|+|+|+|+|.++..+++.    .|+    ++.+.++.+. ..+.-
T Consensus       159 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vlDiG~G~G~~~~~l~~~----~p~----~~~~~~Dlp~-~~~~a  229 (359)
T 1x19_A          159 VTREDNLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKH----FPE----LDSTILNLPG-AIDLV  229 (359)
T ss_dssp             CSHHHHHHHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHH----CTT----CEEEEEECGG-GHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH----CCC----EEEEEECCHH-HHHHH
T ss_conf             18689999999999758999999998478767877997679897999999983----992----2899816688-89999


Q ss_pred             HHHHH
Q ss_conf             86411
Q gi|254780410|r  127 KKQLA  131 (362)
Q Consensus       127 ~~~l~  131 (362)
                      ++++.
T Consensus       230 ~~~~~  234 (359)
T 1x19_A          230 NENAA  234 (359)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             98667


No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer, dimer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=91.31  E-value=0.76  Score=24.34  Aligned_cols=74  Identities=19%  Similarity=0.244  Sum_probs=43.7

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCHHCC-CCHHHCC---CCCEEE
Q ss_conf             21410078646898887999974185643012102363697899999864111--02310110-4344445---695699
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS--YGDKINWY-TSLADVP---LGFTFL  153 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~--~~~~v~w~-~~l~~~~---~~~~ii  153 (362)
                      -.|+++|+|+|.|+.-..+    .     ...+.+.+|.|+..... ++.+..  ..++|..+ .+..+++   ....+|
T Consensus        40 ~~VLDiGcGtG~ls~~aa~----~-----Ga~~V~a~d~s~~~~~a-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~D~v  109 (328)
T 1g6q_1           40 KIVLDVGCGTGILSMFAAK----H-----GAKHVIGVDMSSIIEMA-KELVELNGFSDKITLLRGKLEDVHLPFPKVDII  109 (328)
T ss_dssp             CEEEEETCTTSHHHHHHHH----T-----CCSEEEEEESSTHHHHH-HHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEE
T ss_pred             CEEEEECCCCCHHHHHHHH----C-----CCCEEEEEECHHHHHHH-HHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEE
T ss_conf             9999978997799999997----1-----99989999597999999-999987387623899971210055776664299


Q ss_pred             EEECCCCCCC
Q ss_conf             9812288752
Q gi|254780410|r  154 VANEFFDSLP  163 (362)
Q Consensus       154 iaNE~lDAlP  163 (362)
                      +++.+...++
T Consensus       110 vse~~~~~~~  119 (328)
T 1g6q_1          110 ISEWMGYFLL  119 (328)
T ss_dssp             EECCCBTTBS
T ss_pred             EEEECCEECC
T ss_conf             9973320304


No 136
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=91.18  E-value=0.58  Score=25.18  Aligned_cols=44  Identities=14%  Similarity=0.122  Sum_probs=33.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      ....|+|+|.|.|.++.-+.+.    .      .+++-||.|+.+.+.-+++..
T Consensus        56 ~~~~vLDvGCG~G~~~~~la~~----g------~~v~gvD~s~~~i~~Ar~~~~   99 (245)
T 3ggd_A           56 PELPLIDFACGNGTQTKFLSQF----F------PRVIGLDVSKSALEIAAKENT   99 (245)
T ss_dssp             TTSCEEEETCTTSHHHHHHHHH----S------SCEEEEESCHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCCHHHHHHHCC----C------CEEEEEECCHHHHHHHHHHCC
T ss_conf             9985899758797879997637----8------459985099999999998674


No 137
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA processing, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=90.48  E-value=0.47  Score=25.77  Aligned_cols=50  Identities=18%  Similarity=0.328  Sum_probs=34.1

Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             9838887621410078646898887999974185643012102363697899999864
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                      .......+..|+|+|.|+|..+..+    .+..|+    ..++=+|+++.....-..+
T Consensus        40 ~~~~~~~~~~iLeIGcG~G~~l~~l----A~~~P~----~~~iGiei~~~~~~~~~~~   89 (235)
T 3ckk_A           40 KEKRAQAQVEFADIGCGYGGLLVEL----SPLFPD----TLILGLEIRVKVSDYVQDR   89 (235)
T ss_dssp             ------CCEEEEEETCTTCHHHHHH----GGGSTT----SEEEEEESCHHHHHHHHHH
T ss_pred             HHHCCCCCCEEEEEECCCCHHHHHH----HHHCCC----CCEEEEEECHHHHHHHHHH
T ss_conf             6644668987999822686999999----986868----7289886135899999989


No 138
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, alternative splicing; 2.55A {Rattus norvegicus}
Probab=90.43  E-value=0.92  Score=23.80  Aligned_cols=73  Identities=19%  Similarity=0.273  Sum_probs=43.1

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH--HCCCCHHCCC-CHHHC--CCCCEEE
Q ss_conf             62141007864689888799997418564301210236369789999986411--1023101104-34444--5695699
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA--SYGDKINWYT-SLADV--PLGFTFL  153 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~--~~~~~v~w~~-~l~~~--~~~~~ii  153 (362)
                      .-.|+++|+|+|-|+.-..+    .     ..-+.+.||.|+..... ++...  .+.++|..+. +..++  |....+|
T Consensus       159 ~kvVLDvGcGtGiLs~~AA~----a-----GA~kV~avE~S~~a~~A-~~~v~~Ngl~d~I~vi~g~~e~l~lpe~vDvI  228 (480)
T 3b3j_A          159 DKIVLDVGCGSGILSFFAAQ----A-----GARKIYAVEASTMAQHA-EVLVKSNNLTDRIVVIPGKVEEVSLPEQVDII  228 (480)
T ss_dssp             TCEEEEESCSTTHHHHHHHH----T-----TCSEEEEEECHHHHHHH-HHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHH----C-----CCCEEEEECCHHHHHHH-HHHHHHCCCCCCEEEEECCHHHCCCCCCCCEE
T ss_conf             89899968883699999998----5-----99889999095999999-99999749986168997527656767666789


Q ss_pred             EEECCCCCC
Q ss_conf             981228875
Q gi|254780410|r  154 VANEFFDSL  162 (362)
Q Consensus       154 iaNE~lDAl  162 (362)
                      ++ |+++.+
T Consensus       229 VS-E~mg~~  236 (480)
T 3b3j_A          229 IS-EPMGYM  236 (480)
T ss_dssp             EC-CCCHHH
T ss_pred             EE-ECCCCC
T ss_conf             99-832200


No 139
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=90.22  E-value=0.65  Score=24.83  Aligned_cols=55  Identities=20%  Similarity=0.208  Sum_probs=39.0

Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      ..++-...-.|+|+|+|+|.++..+.+    ..|    ..+.+-+|.|+...+..+++.....
T Consensus        19 ~~L~~~pg~~vLDiGcG~G~~a~~~a~----~~~----~~~V~avD~~~~~~~~a~~~~~~~~   73 (178)
T 3hm2_A           19 SALAPKPHETLWDIGGGSGSIAIEWLR----STP----QTTAVCFEISEERRERILSNAINLG   73 (178)
T ss_dssp             HHHCCCTTEEEEEESTTTTHHHHHHHT----TSS----SEEEEEECSCHHHHHHHHHHHHTTT
T ss_pred             HHCCCCCCCEEEEECCCCCHHHHHHHH----HCC----CCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf             855999979999976688889999999----689----7769885089999999999999819


No 140
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=90.10  E-value=0.97  Score=23.62  Aligned_cols=135  Identities=19%  Similarity=0.276  Sum_probs=70.8

Q ss_pred             CCCCCHHHHHHHHHH---HH-HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHH
Q ss_conf             767117999999999---99-99998388876214100786468988879999741856430121023636978999998
Q gi|254780410|r   52 APEISQIFGEMLAIF---LI-CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQK  127 (362)
Q Consensus        52 sp~is~~Fg~~ia~~---~~-~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~  127 (362)
                      .|+....|...++..   .. .+......+..-.++++|+|.|.++..+++.    .|+    ++.++++.++. .+.-+
T Consensus       172 ~p~~~~~f~~~m~~~~~~~~~~~~~~~d~~~~~~vlDvGgG~G~~~~~l~~~----~P~----l~~~~~Dlp~v-~~~a~  242 (369)
T 3gwz_A          172 DPKARELFNRAMGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDA----FPG----LRGTLLERPPV-AEEAR  242 (369)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHH----CTT----CEEEEEECHHH-HHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH----CCC----CEEEEEECHHH-HHHHH
T ss_conf             9999999999887789988999986368767867988578888899999997----899----86999989688-89999


Q ss_pred             HHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf             64111023101104344445695699981228875235899915664689989960795352257643432234633165
Q gi|254780410|r  128 KQLASYGDKINWYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYF  207 (362)
Q Consensus       128 ~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (362)
                      +++...           ..... .-+.+..+||..|.. +        -.++ +. +     +         +   .++.
T Consensus       243 ~~~~~~-----------~~~~r-i~~~~~d~f~~~p~~-~--------D~~~-l~-~-----v---------L---h~~~  282 (369)
T 3gwz_A          243 ELLTGR-----------GLADR-CEILPGDFFETIPDG-A--------DVYL-IK-H-----V---------L---HDWD  282 (369)
T ss_dssp             HHHHHT-----------TCTTT-EEEEECCTTTCCCSS-C--------SEEE-EE-S-----C---------G---GGSC
T ss_pred             HHHHHC-----------CCCCC-EEEECCCCCCCCCCC-C--------EEEE-EE-C-----C---------C---CCCC
T ss_conf             877751-----------77752-368526323358988-6--------0999-80-4-----3---------3---4688


Q ss_pred             CCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf             684112793478999999997620570599962433
Q gi|254780410|r  208 LGAIFENSPCRDREMQSISDRLACDGGTAIVIDYGY  243 (362)
Q Consensus       208 ~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L~iDYGy  243 (362)
                      +       ......++.+.+.++. +|.++++|+=.
T Consensus       283 d-------~~~~~iL~~~~~aL~p-gG~lli~e~~~  310 (369)
T 3gwz_A          283 D-------DDVVRILRRIATAMKP-DSRLLVIDNLI  310 (369)
T ss_dssp             H-------HHHHHHHHHHHTTCCT-TCEEEEEEEBC
T ss_pred             H-------HHHHHHHHHHHHHCCC-CCEEEEEEECC
T ss_conf             2-------8999999999996599-97899998346


No 141
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.10  E-value=0.97  Score=23.62  Aligned_cols=48  Identities=8%  Similarity=-0.062  Sum_probs=34.0

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             6214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .-.|+++|.|+|..+..+..   ...|    ..+++-|+.|+.+.+.-+++....
T Consensus       119 g~~vLDvGcG~G~~~~~l~~---~~~p----~~~v~gvD~S~~~l~~A~~~~~~~  166 (305)
T 3ocj_A          119 GCVVASVPCGWMSELLALDY---SACP----GVQLVGIDYDPEALDGATRLAAGH  166 (305)
T ss_dssp             TCEEEETTCTTCHHHHTSCC---TTCT----TCEEEEEESCHHHHHHHHHHHTTS
T ss_pred             CCEEEEECCCCHHHHHHHHH---HHCC----CCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             59999944747699999999---7189----958999979888999997530220


No 142
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=90.01  E-value=0.99  Score=23.57  Aligned_cols=109  Identities=16%  Similarity=0.275  Sum_probs=61.6

Q ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHHH------HCCCCC---CCCCCCC-CCCCCCCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             848999999999818980499999987------108987---8646898-888888864576711799999999999999
Q gi|254780410|r    2 ENKLIRKIVNLIKKNGQMTVDQYFALC------VADPEF---GYYSTCN-PFGAVGDFVTAPEISQIFGEMLAIFLICAW   71 (362)
Q Consensus         2 ~~~L~~~i~~~I~~~G~i~f~~fM~~a------Ly~p~~---GYY~~~~-~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~   71 (362)
                      .+.=.+.+.+.|+.+| |.=.+-.+.-      .|=|+.   --|.-.. ++| .|-++.+|++           ...++
T Consensus         4 ~~~r~~~lv~qLr~~g-i~d~~v~~A~~~VpRe~Fvp~~~~~~aY~D~~l~i~-~~~~is~P~~-----------~A~~l   70 (210)
T 3lbf_A            4 VSRRVQALLDQLRAQG-IQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIG-QGQTISQPYM-----------VARMT   70 (210)
T ss_dssp             CCHHHHHHHHHHHHTT-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECT-TSCEECCHHH-----------HHHHH
T ss_pred             HHHHHHHHHHHHHHCC-CCCHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCC-CCCEECCCHH-----------HHHHH
T ss_conf             6899999999999769-999999999975998884991576367667886588-9817544367-----------47678


Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             98388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +.+.....-.|+|+|+|+|.+++=+ -.+.         -+.+.+|..+.+...-++++...
T Consensus        71 ~~L~~~~g~~VLeIGsGtGY~tAll-a~l~---------~~v~~ve~~~~~~~~a~~~~~~~  122 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGTGSGYQTAIL-AHLV---------QHVCSVERIKGLQWQARRRLKNL  122 (210)
T ss_dssp             HHTTCCTTCEEEEECCTTSHHHHHH-HHHS---------SEEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHCCCCCCCEEEEECCCHHHHHHHH-HHHH---------CEECCCCCCHHHHHHHHHHHHHH
T ss_conf             7565689987999678406999999-9862---------83254542228999999998862


No 143
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis V583} SCOP: c.66.1.46
Probab=89.77  E-value=0.65  Score=24.82  Aligned_cols=83  Identities=13%  Similarity=0.081  Sum_probs=50.0

Q ss_pred             CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCE
Q ss_conf             78646898888888864576711799999999999999983888762141007864689888799997418564301210
Q gi|254780410|r   34 FGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSI  113 (362)
Q Consensus        34 ~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~  113 (362)
                      .|-|..+.-.-..| -.|=|..+.+=..+     .+++..  ....-+|+++++|+|.++...+..         ..-+.
T Consensus         8 ~G~~kg~~l~~~~~-~~~RPt~~~vreal-----fn~l~~--~~~~~~vLDlf~GsG~~~~ea~sr---------Ga~~v   70 (187)
T 2fhp_A            8 SGEYGGRRLKALDG-DNTRPTTDKVKESI-----FNMIGP--YFDGGMALDLYSGSGGLAIEAVSR---------GMDKS   70 (187)
T ss_dssp             SSTTTTCBCCCCCC-CSSCCCCHHHHHHH-----HHHHCS--CCSSCEEEETTCTTCHHHHHHHHT---------TCSEE
T ss_pred             EECCCCCEECCCCC-CCCCCCCHHHHHHH-----HHHHHH--HCCCCEEEECCCCCCHHHHHHHHC---------CCCEE
T ss_conf             53358978378998-99587818999999-----998651--159998999888737899999975---------88835


Q ss_pred             EEEECCHHHHHHHHHHHHHC
Q ss_conf             23636978999998641110
Q gi|254780410|r  114 YMVETSERLTLIQKKQLASY  133 (362)
Q Consensus       114 ~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +.||.|+...+..++++...
T Consensus        71 ~~Ve~~~~~~~~~~~N~~~~   90 (187)
T 2fhp_A           71 ICIEKNFAALKVIKENIAIT   90 (187)
T ss_dssp             EEEESCHHHHHHHHHHHHHH
T ss_pred             EEEEECHHHHHHHHHHHHHC
T ss_conf             89994246776766555420


No 144
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=89.75  E-value=0.46  Score=25.83  Aligned_cols=50  Identities=20%  Similarity=0.103  Sum_probs=35.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHC
Q ss_conf             214100786468988879999741856430121023636978999998641110231011
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINW  139 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w  139 (362)
                      -.|+|+|.|+|..+.-+.+    .      -.+++-|+.|+...+.-+++.++.+.++.+
T Consensus        31 ~~vLDlGcG~G~~~~~la~----~------G~~V~~vD~s~~~l~~a~~~~~~~~~~~~~   80 (202)
T 2kw5_A           31 GKILCLAEGEGRNACFLAS----L------GYEVTAVDQSSVGLAKAKQLAQEKGVKITT   80 (202)
T ss_dssp             SEEEECCCSCTHHHHHHHT----T------TCEEEEECSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCEEEECCCCCHHHHHHHH----C------CCCEEEEECCHHHHHHHHHHHHHHCCCEEE
T ss_conf             9399983778999999998----6------991467777899999999988871995589


No 145
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=89.72  E-value=0.58  Score=25.16  Aligned_cols=74  Identities=12%  Similarity=0.172  Sum_probs=49.9

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHHHHHC-CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHH
Q ss_conf             888864576711799999999999999983-8887621410078646898887999974185643012102363697899
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIFLICAWEQH-GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLT  123 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~-~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~  123 (362)
                      ..|.|+|-++|..+-.+++        ... .......|++-.+|+|.|.....+.+...     ....++=.|.++...
T Consensus       195 ~~Ge~~TP~~Iv~lmv~l~--------~~~~~~~~~~~I~DPacGsGgfL~~a~~~~~~~-----~~~~~~G~e~~~~~~  261 (542)
T 3lkd_A          195 KAGEFYTPQPVAKLMTQIA--------FLGREDKQGFTLYDATMGSGSLLLNAKRYSRQP-----QTVVYFGQELNTSTY  261 (542)
T ss_dssp             CCSSCCCCHHHHHHHHHHH--------HTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCT-----TTCEEEEEESCHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHC--------CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHH-----CCEEEEEEECCHHHH
T ss_conf             4771589889998578642--------556456789868327788455889888877500-----555787442667999


Q ss_pred             HHHHHHHH
Q ss_conf             99986411
Q gi|254780410|r  124 LIQKKQLA  131 (362)
Q Consensus       124 ~~Q~~~l~  131 (362)
                      ..-+-++-
T Consensus       262 ~la~~nl~  269 (542)
T 3lkd_A          262 NLARMNMI  269 (542)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999878


No 146
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=89.67  E-value=1.1  Score=23.39  Aligned_cols=51  Identities=14%  Similarity=0.177  Sum_probs=37.6

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             88762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .|..-.|+++|.|+|.++..+++.    .    ...+.+.+|.|+...+.-++++...+
T Consensus        13 v~~g~~ilDiG~g~G~~~~~l~~~----~----~~~~v~avDi~~~~l~~a~~n~~~~~   63 (225)
T 3kr9_A           13 VSQGAILLDVGSDHAYLPIELVER----G----QIKSAIAGEVVEGPYQSAVKNVEAHG   63 (225)
T ss_dssp             SCTTEEEEEETCSTTHHHHHHHHT----T----SEEEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHC----C----CCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             899898999618569999999980----9----99889971099999999999999829


No 147
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A*
Probab=89.30  E-value=0.67  Score=24.75  Aligned_cols=58  Identities=19%  Similarity=0.213  Sum_probs=41.1

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCC
Q ss_conf             8887621410078646898887999974185643012102363697899999864111023101104
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYT  141 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~  141 (362)
                      +..+.-.|+|+|.|.|.++.-++.      +   ...+++-++.|+.+.+.-++.+......+.|..
T Consensus        53 ~~~~g~~vLDlGCG~G~~~~~l~~------~---~~~~V~giD~S~~~i~~a~~~~~~~~~~~~~~~  110 (265)
T 2i62_A           53 GAVKGELLIDIGSGPTIYQLLSAC------E---SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSP  110 (265)
T ss_dssp             SSCCEEEEEEESCTTCCGGGTTGG------G---TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHH
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHH------H---CCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             888898899967877676999997------2---199899956999999999999875477622132


No 148
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=89.15  E-value=0.4  Score=26.28  Aligned_cols=102  Identities=12%  Similarity=0.054  Sum_probs=53.8

Q ss_pred             CEEECCCCCHHHHHHHHHHHHHHHHH-CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHH
Q ss_conf             86457671179999999999999998-38887621410078646898887999974185643012102363697899999
Q gi|254780410|r   48 DFVTAPEISQIFGEMLAIFLICAWEQ-HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQ  126 (362)
Q Consensus        48 DF~Tsp~is~~Fg~~ia~~~~~~~~~-~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q  126 (362)
                      |+.++.+.+.-  +.+. ++.++... .+.+.+-.|+++|.|.|.|+...       .|    ..+++-++.|+.+.+.-
T Consensus        77 ~~~~~~h~~~~--e~~~-~~~~~~~~~~~~~~~~~VLDlGCG~G~l~~~~-------~~----~~~v~gvD~s~~~l~~a  142 (253)
T 3frh_A           77 KKALSLHASTK--ERLA-ELDTLYDFIFSAETPRRVLDIACGLNPLALYE-------RG----IASVWGCDIHQGLGDVI  142 (253)
T ss_dssp             HHHHTTSHHHH--HHGG-GHHHHHHHHTSSCCCSEEEEETCTTTHHHHHH-------TT----CSEEEEEESBHHHHHHH
T ss_pred             HHHHCCCCCHH--HHHH-HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH-------CC----CCEEEEEECCHHHHHHH
T ss_conf             87752687759--9999-99999999845899985999678888999997-------68----98389997979999999


Q ss_pred             HHHHHHCCCCHHCC-CCHHHCCC--CCEEEEEECCCCCCC
Q ss_conf             86411102310110-43444456--956999812288752
Q gi|254780410|r  127 KKQLASYGDKINWY-TSLADVPL--GFTFLVANEFFDSLP  163 (362)
Q Consensus       127 ~~~l~~~~~~v~w~-~~l~~~~~--~~~iiiaNE~lDAlP  163 (362)
                      ++++...+.++... .+..+.+.  ...++++.+++--||
T Consensus       143 r~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~vl~~l~  182 (253)
T 3frh_A          143 TPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLE  182 (253)
T ss_dssp             HHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHH
T ss_pred             HHHHHHCCCCCEEEECCHHHCCCCCCCCHHHHHCHHHHCC
T ss_conf             9999982997048855622245776744105424486489


No 149
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research, nysgxrc; 2.33A {Bacteroides vulgatus atcc 8482}
Probab=89.01  E-value=1.2  Score=23.08  Aligned_cols=51  Identities=20%  Similarity=0.261  Sum_probs=32.6

Q ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      +....+..-.||++|+|+|..+..+++.    .|+    ++..+++.++.. ...+++..
T Consensus       173 ~~~~~~~~~~vLDiG~G~G~~~~~la~~----~p~----~~~~~~d~~~~~-~~~~~~~~  223 (363)
T 3dp7_A          173 EIVFSHHPKRLLDIGGNTGKWATQCVQY----NKE----VEVTIVDLPQQL-EMMRKQTA  223 (363)
T ss_dssp             HHHGGGCCSEEEEESCTTCHHHHHHHHH----STT----CEEEEEECHHHH-HHHHHHHT
T ss_pred             HHCCCCCCCEEEEECCCCHHHHHHHHHH----CCC----EEEEEECCCHHH-HHHHHHHH
T ss_conf             7524458998999799952999999986----897----399997571167-99998876


No 150
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=88.96  E-value=1.2  Score=23.05  Aligned_cols=145  Identities=11%  Similarity=0.252  Sum_probs=74.1

Q ss_pred             CCCEEECCCCCHHHHHHHHHH---HHHHHHHCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHH
Q ss_conf             888645767117999999999---999999838-8876214100786468988879999741856430121023636978
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIF---LICAWEQHG-FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSER  121 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~---~~~~~~~~~-~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~  121 (362)
                      .+.|...|+....|.......   ....+.... .+..-.|+++|+|.|.++..+++.    .|+    ++..+++.++.
T Consensus       143 ~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~p~----~~~~~~Dlp~~  214 (352)
T 3mcz_A          143 ESRFAHDTRARDAFNDAMVRLSQPMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRR----HPQ----LTGQIWDLPTT  214 (352)
T ss_dssp             HHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHH----CTT----CEEEEEECGGG
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH----CCE----EEEEEEECHHH
T ss_conf             4644469999999999999989999999997138777998999889887999999975----983----48999601999


Q ss_pred             HHHHHHHHHHHCC--CCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCC
Q ss_conf             9999986411102--31011043444456956999812288752358999156646899899607953522576434322
Q gi|254780410|r  122 LTLIQKKQLASYG--DKINWYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSN  199 (362)
Q Consensus       122 l~~~Q~~~l~~~~--~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~  199 (362)
                      + +.-++++.+.+  ++|.              +++-.+|+..|..      ++-+-.++- . +              .
T Consensus       215 ~-~~a~~~~~~~~l~~rv~--------------~~~gd~~~~~~~~------~~~~D~v~~-~-~--------------v  257 (352)
T 3mcz_A          215 R-DAARKTIHAHDLGGRVE--------------FFEKNLLDARNFE------GGAADVVML-N-D--------------C  257 (352)
T ss_dssp             H-HHHHHHHHHTTCGGGEE--------------EEECCTTCGGGGT------TCCEEEEEE-E-S--------------C
T ss_pred             H-HHHHHHHHHCCCCCCCE--------------EEECCCCCCCCCC------CCCCCEEEE-C-C--------------E
T ss_conf             9-99999998638865525--------------7754411134566------777636875-1-3--------------1


Q ss_pred             CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
Q ss_conf             34633165684112793478999999997620570599962433685
Q gi|254780410|r  200 FLTCSDYFLGAIFENSPCRDREMQSISDRLACDGGTAIVIDYGYLQS  246 (362)
Q Consensus       200 ~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~~~G~~L~iDYGy~~~  246 (362)
                      +   .++.       .......++.+.+.++. +|.++++|+--...
T Consensus       258 l---h~~~-------d~~~~~~L~~~~~aL~p-gG~lli~e~~~~~~  293 (352)
T 3mcz_A          258 L---HYFD-------AREAREVIGHAAGLVKP-GGALLILTMTMNDD  293 (352)
T ss_dssp             G---GGSC-------HHHHHHHHHHHHHTEEE-EEEEEEEEECCCTT
T ss_pred             E---ECCC-------HHHHHHHHHHHHHHCCC-CCEEEEEEECCCCC
T ss_conf             2---0389-------99999999999986298-81899998204898


No 151
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=88.66  E-value=1.2  Score=22.92  Aligned_cols=183  Identities=17%  Similarity=0.214  Sum_probs=84.4

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCCCCHHHCCCCCEEEEE
Q ss_conf             88762141007864689888799997418564301210236369789999986411102310110434444569569998
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWYTSLADVPLGFTFLVA  155 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~~~l~~~~~~~~iiia  155 (362)
                      ...+..|+|+|.|+|.   |+..+++.      ..-.++-+++|+...+.-+++......+..-    .-.+ ...++.+
T Consensus        32 ~~~~~~VLDlGCG~G~---dl~k~~~~------~~~~v~GiDis~~~i~~A~~r~~~~~~~~~~----~~~~-~~~f~~~   97 (313)
T 3bgv_A           32 KKRDITVLDLGCGKGG---DLLKWKKG------RINKLVCTDIADVSVKQCQQRYEDMKNRRDS----EYIF-SAEFITA   97 (313)
T ss_dssp             C--CCEEEEETCTTTT---THHHHHHT------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-----CCC-EEEEEEC
T ss_pred             CCCCCEEEEEECCCCH---HHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHHCCCCCCC----CCCC-CEEEEEC
T ss_conf             7897979997347768---89999965------9997999959999999999998854322222----3577-6389965


Q ss_pred             E----CCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
Q ss_conf             1----228875235899915664689989960795352257643432234633165684112793478999999997620
Q gi|254780410|r  156 N----EFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYFLGAIFENSPCRDREMQSISDRLAC  231 (362)
Q Consensus       156 N----E~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~~~~~~~i~~~l~~  231 (362)
                      +    .+.+.+|.                  .++.+           ....+ ....-+..+-......+++.+++.|+.
T Consensus        98 D~~~~~~~~~~~~------------------~~~~F-----------D~I~~-~f~lhy~~~~~~~~~~~l~ni~~~Lkp  147 (313)
T 3bgv_A           98 DSSKELLIDKFRD------------------PQMCF-----------DICSC-QFVCHYSFESYEQADMMLRNACERLSP  147 (313)
T ss_dssp             CTTTSCSTTTCSS------------------TTCCE-----------EEEEE-ETCGGGGGGSHHHHHHHHHHHHTTEEE
T ss_pred             CHHHCHHHHHCCC------------------CCCCC-----------EEEEE-CCCCEECCHHHHHHHHHHHHHHHHCCC
T ss_conf             6321201331467------------------67761-----------08996-564242121587999989998753077


Q ss_pred             CCEEEEEECCC-C------CC---CCCCCEEEEECCCCC--CCCC------CCCCCCCCC-CCCCHHHHHHHHHHCCCEE
Q ss_conf             57059996243-3------68---588880776405767--6700------010003453-1268899999999689836
Q gi|254780410|r  232 DGGTAIVIDYG-Y------LQ---SRVGDTLQAVKGHTY--VSPL------VNPGQADLS-SHVDFQRLSSIAILYKLYI  292 (362)
Q Consensus       232 ~~G~~L~iDYG-y------~~---~r~~gTLr~y~~H~~--~dpl------~~pG~~DIT-ahVnFs~L~~~a~~~g~~~  292 (362)
                       +|.++.--+. .      ..   ...++.+-.++-+..  ..++      ..-+..|++ +-|+|..|.+.++++|++.
T Consensus       148 -GG~fi~t~~d~~~l~~~l~~~~~~~~~n~i~~i~~~~~~~~~~fg~~~~f~~~~~~~~~Eylv~~~~l~~l~~~~G~~l  226 (313)
T 3bgv_A          148 -GGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKL  226 (313)
T ss_dssp             -EEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEE
T ss_pred             -CEEEEEEECCHHHHHHHHHHCCCHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHEECHHHHHHHHHHCCCEE
T ss_conf             -4379998526899999876311222088027999943554456772368984214432552316999999999869999


Q ss_pred             ECCEEHHHHHH
Q ss_conf             33233899999
Q gi|254780410|r  293 NGLTTQGKFLE  303 (362)
Q Consensus       293 ~g~~sQ~~FL~  303 (362)
                      +...+=.+|..
T Consensus       227 v~~~~F~~~~~  237 (313)
T 3bgv_A          227 VYKKTFLEFYE  237 (313)
T ss_dssp             EEEEEHHHHHH
T ss_pred             EEECCHHHHHH
T ss_conf             98037799998


No 152
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=88.51  E-value=0.3  Score=27.09  Aligned_cols=66  Identities=18%  Similarity=0.174  Sum_probs=41.7

Q ss_pred             HHHHHHHHHC---CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHC
Q ss_conf             9999999983---88876214100786468988879999741856430121023636978999998641110231011
Q gi|254780410|r   65 IFLICAWEQH---GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINW  139 (362)
Q Consensus        65 ~~~~~~~~~~---~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w  139 (362)
                      .|+.+.+.++   +..+.-.|+++|.|+|.++.-+.+         ....+++-++.|+...+.-++++...+..+.|
T Consensus        39 ~~~~~~~~~~~~~~~~~g~~vLDlGCG~G~~~~~~a~---------~~~~~V~giD~S~~~i~~a~~~~~~~~~~~~~  107 (263)
T 2a14_A           39 KFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAAC---------DSFQDITLSDFTDRNREELEKWLKKEPGAYDW  107 (263)
T ss_dssp             HHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGG---------GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCC
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH---------HCCCEEEEECCCHHHHHHHHHHHHHCCCCCHH
T ss_conf             9999999998166888998899978886289999998---------47976899518999999999999865765102


No 153
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=88.39  E-value=1.3  Score=22.80  Aligned_cols=78  Identities=26%  Similarity=0.350  Sum_probs=53.5

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-++-.---.+-++++.--..     -.|.+-+|+-+|.|+|..++.++++    .    ...++.+||
T Consensus        48 ~~g~~L~LDg~~q~~~~de~~Yhe~l~h~pl~-----~~~~p~~VLiiGgG~G~~~~e~lk~----~----~v~~v~~VE  114 (294)
T 3adn_A           48 AFGRVMALDGVVQTTERDEFIYHEMMTHVPLL-----AHGHAKHVLIIGGGDGAMLREVTRH----K----NVESITMVE  114 (294)
T ss_dssp             TTCCEEEETTEEEEETTTHHHHHHHHHHHHHH-----HSTTCCEEEEESCTTCHHHHHHHTC----T----TCCEEEEEC
T ss_pred             CCCEEEEECCHHHHHCCCHHHHHHHHHHHHHH-----CCCCCCEEEEECCCCHHHHHHHHHH----C----CCCEEEEEC
T ss_conf             86549999990053047678999999888875-----0998566999889837999999981----9----966389971


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       115 iD~~Vi~~a~~~~~~  129 (294)
T 3adn_A          115 IDAGVVSFCRQYLPN  129 (294)
T ss_dssp             SCTTHHHHHHHHCHH
T ss_pred             CCHHHHHHHHHCCCC
T ss_conf             789999998744841


No 154
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=88.28  E-value=0.98  Score=23.61  Aligned_cols=48  Identities=21%  Similarity=0.297  Sum_probs=34.7

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             88762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .+.+..|+|+|.|.|.++..+..    ..|+    .+++-+|+++.......+++.
T Consensus        47 ~~~~p~iLeIGcG~G~~l~~lA~----~~p~----~~~iGiEi~~~~v~~~~~ri~   94 (246)
T 2vdv_E           47 MTKKVTIADIGCGFGGLMIDLSP----AFPE----DLILGMEIRVQVTNYVEDRII   94 (246)
T ss_dssp             BSCCEEEEEETCTTSHHHHHHHH----HSTT----SEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCHHHHHHHH----HCCC----CCEEEEECCHHHHHHHHHHHH
T ss_conf             68998799982689989999998----6898----758988503689999999999


No 155
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=88.02  E-value=1.3  Score=22.65  Aligned_cols=78  Identities=18%  Similarity=0.292  Sum_probs=52.8

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|..-++-.--..+-|+++.-     ..+..|.+-+|+-+|.|+|..++.++++    .    ...++.+||
T Consensus        85 ~~G~~L~LDg~~q~te~De~~YhEml~h~-----pl~~h~~PkrVLIIGgGdG~~~revlk~----~----~v~~v~~VE  151 (334)
T 1xj5_A           85 TYGKVLVLDGVIQLTERDECAYQEMITHL-----PLCSIPNPKKVLVIGGGDGGVLREVARH----A----SIEQIDMCE  151 (334)
T ss_dssp             SSCEEEEETTEEEEETTTHHHHHHHHHHH-----HHTTSSCCCEEEEETCSSSHHHHHHTTC----T----TCCEEEEEE
T ss_pred             CCCCEEEECCEEEEECCCHHHHHHHHHHH-----HHHCCCCCCEEEEECCCCHHHHHHHHHC----C----CCCCCEEEC
T ss_conf             85608999996342036688888998888-----8751999886999889948999999974----9----965335750


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       152 ID~~Vi~~a~~~fp~  166 (334)
T 1xj5_A          152 IDKMVVDVSKQFFPD  166 (334)
T ss_dssp             SCHHHHHHHHHHCHH
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             589999999975344


No 156
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=87.79  E-value=1.4  Score=22.55  Aligned_cols=67  Identities=15%  Similarity=0.086  Sum_probs=44.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             71179999999999999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   54 EISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        54 ~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .++|.=|++|..     +-+...|.  +|+|+|.+.|.=+.-+.+.+..       .-+++.+|.++...+.-++.+...
T Consensus        53 ~~~p~~g~lL~~-----L~~~~~~k--~vLEiGT~~GyStl~la~al~~-------~g~v~tie~~~~~~~~A~~~~~~a  118 (237)
T 3c3y_A           53 STSPLAGQLMSF-----VLKLVNAK--KTIEVGVFTGYSLLLTALSIPD-------DGKITAIDFDREAYEIGLPFIRKA  118 (237)
T ss_dssp             SCCHHHHHHHHH-----HHHHTTCC--EEEEECCTTSHHHHHHHHHSCT-------TCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHH-----HHHHHCCC--EEEEEECCCCHHHHHHHHHCCC-------CCEEEEEEECHHHHHHHHHHHHHC
T ss_conf             769999999999-----99973998--8999705257899999974899-------848999960267689999999984


Q ss_pred             C
Q ss_conf             2
Q gi|254780410|r  134 G  134 (362)
Q Consensus       134 ~  134 (362)
                      +
T Consensus       119 g  119 (237)
T 3c3y_A          119 G  119 (237)
T ss_dssp             T
T ss_pred             C
T ss_conf             9


No 157
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=87.71  E-value=0.54  Score=25.40  Aligned_cols=49  Identities=22%  Similarity=0.255  Sum_probs=36.4

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             88762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .|..-.|+|+|.|+|.++..+.+.          -.+++-++.|+.+.+.-++++...+
T Consensus        80 ~p~~g~vLDlGcG~G~~~~~la~~----------g~~v~gvD~s~~ml~~a~~~~~~~~  128 (299)
T 3g2m_A           80 GPVSGPVLELAAGMGRLTFPFLDL----------GWEVTALELSTSVLAAFRKRLAEAP  128 (299)
T ss_dssp             CCCCSCEEEETCTTTTTHHHHHTT----------TCCEEEEESCHHHHHHHHHHHHTSC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             999997999916677899999977----------9979999699999999999998647


No 158
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=87.54  E-value=1  Score=23.48  Aligned_cols=132  Identities=19%  Similarity=0.288  Sum_probs=67.0

Q ss_pred             CCCCCHHHHHHHHHH---HHH-HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHH
Q ss_conf             767117999999999---999-9998388876214100786468988879999741856430121023636978999998
Q gi|254780410|r   52 APEISQIFGEMLAIF---LIC-AWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQK  127 (362)
Q Consensus        52 sp~is~~Fg~~ia~~---~~~-~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~  127 (362)
                      .|+....|...++..   ... +......+..-+|+++|.|.|.++..+++.    .|+    ++.++++.++...+   
T Consensus       154 ~~~~~~~f~~~m~~~~~~~~~~~~~~~d~~~~~~vlDvGgG~G~~~~~l~~~----~p~----~~~~~~D~~~~~~~---  222 (348)
T 3lst_A          154 DAEVEALYYEGMETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLRE----HPG----LQGVLLDRAEVVAR---  222 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHH----CTT----EEEEEEECHHHHTT---
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH----CCC----EEEEECCCHHHHHH---
T ss_conf             9899999999878888888999988548887766997589986899998843----898----38995361777666---


Q ss_pred             HHHHHCCCCHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf             64111023101104344445695699981228875235899915664689989960795352257643432234633165
Q gi|254780410|r  128 KQLASYGDKINWYTSLADVPLGFTFLVANEFFDSLPIKQFVMTEHGIRERMIDIDQHDSLVFNIGDHEIKSNFLTCSDYF  207 (362)
Q Consensus       128 ~~l~~~~~~v~w~~~l~~~~~~~~iiiaNE~lDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (362)
                      ++.           .-...... .-+++.-+||..|--          ..++ + .+              .+   .+  
T Consensus       223 ~~~-----------~~~~~~~r-i~~~~~d~~~~~p~~----------D~v~-~-~~--------------vl---h~--  259 (348)
T 3lst_A          223 HRL-----------DAPDVAGR-WKVVEGDFLREVPHA----------DVHV-L-KR--------------IL---HN--  259 (348)
T ss_dssp             CCC-----------CCGGGTTS-EEEEECCTTTCCCCC----------SEEE-E-ES--------------CG---GG--
T ss_pred             HHH-----------HCCCCCCC-EEEECCCCCCCCCCC----------EEEE-E-EC--------------CH---HC--
T ss_conf             665-----------33467883-688447632368775----------0998-7-51--------------02---13--


Q ss_pred             CCCEECCC-HHHHHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf             68411279-34789999999976205705999624336
Q gi|254780410|r  208 LGAIFENS-PCRDREMQSISDRLACDGGTAIVIDYGYL  244 (362)
Q Consensus       208 ~g~~~E~~-~~~~~~~~~i~~~l~~~~G~~L~iDYGy~  244 (362)
                            ++ ......++.+.+.++. +|.++++|.=..
T Consensus       260 ------~~d~~~~~iL~~~~~~L~p-gG~lli~d~~~~  290 (348)
T 3lst_A          260 ------WGDEDSVRILTNCRRVMPA-HGRVLVIDAVVP  290 (348)
T ss_dssp             ------SCHHHHHHHHHHHHHTCCT-TCEEEEEECCBC
T ss_pred             ------CCHHHHHHHHHHHHHHCCC-CCEEEEEEEECC
T ss_conf             ------9999999999999996699-988999986048


No 159
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=87.06  E-value=1.5  Score=22.28  Aligned_cols=68  Identities=16%  Similarity=0.219  Sum_probs=43.5

Q ss_pred             ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             57671179999999999999998388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   51 TAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        51 Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      |=|..+.+= |++    .+++... .+..-.|+++|+|+|.++...+.   +       -.+.+.||.++...+.-++++
T Consensus        20 ~Rpt~~~vr-e~~----f~~l~~~-~~~~~~vLDl~~G~G~~~i~a~~---~-------ga~vv~vD~~~~ai~~~~~N~   83 (171)
T 1ws6_A           20 ARPSPVRLR-KAL----FDYLRLR-YPRRGRFLDPFAGSGAVGLEAAS---E-------GWEAVLVEKDPEAVRLLKENV   83 (171)
T ss_dssp             CCCCCHHHH-HHH----HHHHHHH-CTTCCEEEEETCSSCHHHHHHHH---T-------TCEEEEECCCHHHHHHHHHHH
T ss_pred             CCCCCHHHH-HHH----HHHHHCC-CCCCCEEEECCCCHHHHHHHHHH---C-------CCCCCCEECCHHHHHHHHHHH
T ss_conf             896748999-999----9997364-57979899962067899999998---0-------895300606878999999878


Q ss_pred             HHCC
Q ss_conf             1102
Q gi|254780410|r  131 ASYG  134 (362)
Q Consensus       131 ~~~~  134 (362)
                      ...+
T Consensus        84 ~~~g   87 (171)
T 1ws6_A           84 RRTG   87 (171)
T ss_dssp             HHHT
T ss_pred             HHCC
T ss_conf             8606


No 160
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=86.85  E-value=1.6  Score=22.20  Aligned_cols=51  Identities=16%  Similarity=0.170  Sum_probs=38.0

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             88762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      .|..-.|+++|.|+|.|+..+++.    .    ...+.+.+|+|+...+.-++++...+
T Consensus        19 v~~g~~vlDIG~g~G~l~i~l~~~----~----~~~~viavDi~~~~l~~A~~n~~~~g   69 (230)
T 3lec_A           19 VPKGARLLDVGSDHAYLPIFLLQM----G----YCDFAIAGEVVNGPYQSALKNVSEHG   69 (230)
T ss_dssp             SCTTEEEEEETCSTTHHHHHHHHT----T----CEEEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHC----C----CCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             899899999528649999999983----9----99879993099999999999999839


No 161
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=86.70  E-value=1.6  Score=22.15  Aligned_cols=73  Identities=25%  Similarity=0.250  Sum_probs=47.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +.++|.=|++|... +    .+..|.  +|+|+|.+.|.=+.-+.+.+.   +    .-+++.+|.++...+.-++.+..
T Consensus        42 m~i~p~~g~~L~~L-~----~~~~ak--~iLEiGT~~GySal~lA~al~---~----~g~v~tie~~~~~~~~A~~~~~~  107 (239)
T 2hnk_A           42 MQISPEEGQFLNIL-T----KISGAK--RIIEIGTFTGYSSLCFASALP---E----DGKILCCDVSEEWTNVARKYWKE  107 (239)
T ss_dssp             CSCCHHHHHHHHHH-H----HHHTCS--EEEEECCTTCHHHHHHHHHSC---T----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH-H----HHHCCC--EEEEEECCCCHHHHHHHHHCC---C----CCCEEEEECCHHHHHHHHHHHHH
T ss_conf             77599999999999-9----972997--799972545889999997178---7----88689994538889999999998


Q ss_pred             CC--CCHHC
Q ss_conf             02--31011
Q gi|254780410|r  133 YG--DKINW  139 (362)
Q Consensus       133 ~~--~~v~w  139 (362)
                      .+  ++|..
T Consensus       108 ag~~~~I~~  116 (239)
T 2hnk_A          108 NGLENKIFL  116 (239)
T ss_dssp             TTCGGGEEE
T ss_pred             CCCCEEEEE
T ss_conf             799625999


No 162
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, tRNA processing; HET: SAM; 1.50A {Escherichia coli K12} PDB: 3dxx_A* 3dxz_A*
Probab=86.59  E-value=1.4  Score=22.60  Aligned_cols=47  Identities=15%  Similarity=0.143  Sum_probs=33.2

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             88762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .+.++ ++|+|.|+|..+..+..    ..|+    ..++-+|+++.....-.+++.
T Consensus        33 ~~~pl-iLEIGcG~G~~l~~~A~----~~P~----~~~iGiEi~~~~v~~a~~~~~   79 (218)
T 3dxy_A           33 REAPV-TLEIGFGMGASLVAMAK----DRPE----QDFLGIEVHSPGVGACLASAH   79 (218)
T ss_dssp             SCCCE-EEEESCTTCHHHHHHHH----HCTT----SEEEEECSCHHHHHHHHHHHH
T ss_pred             CCCCE-EEEECCCCCHHHHHHHH----HCCC----CCEEEEEEECCCEEEEHHHCC
T ss_conf             99953-99972688899999999----6899----988999972350553032120


No 163
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=86.56  E-value=1.6  Score=22.10  Aligned_cols=56  Identities=18%  Similarity=0.144  Sum_probs=40.1

Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             9983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   71 WEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        71 ~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      +...+....-.|+++|.|.|.+..-++..    .|    ..+++.||.||.+.+.-++++...+
T Consensus       115 ~~~~~l~~g~rVLdiGcG~g~~t~~~~a~----~~----g~~V~gIDisp~~~~~Ar~~~~~~g  170 (298)
T 3fpf_A          115 AALGRFRRGERAVFIGGGPLPLTGILLSH----VY----GMRVNVVEIEPDIAELSRKVIEGLG  170 (298)
T ss_dssp             HHHTTCCTTCEEEEECCCSSCHHHHHHHH----TT----CCEEEEEESSHHHHHHHHHHHHHHT
T ss_pred             HHHCCCCCCCEEEEEECCCHHHHHHHHHH----CC----CCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             98548999998999606856999999985----68----9989999699999999999798649


No 164
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=86.34  E-value=1.1  Score=23.35  Aligned_cols=48  Identities=17%  Similarity=0.221  Sum_probs=37.8

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             76214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      ..-.|+++|.|+|.++.++.+.+    |    ..+++-|++|+.+.+.-++++...
T Consensus        46 ~~~~vLDiGCG~G~~~i~la~~~----~----~~~v~GiDis~~~i~~A~~n~~~~   93 (292)
T 3g07_A           46 RGRDVLDLGCNVGHLTLSIACKW----G----PSRMVGLDIDSRLIHSARQNIRHY   93 (292)
T ss_dssp             TTSEEEEESCTTCHHHHHHHHHT----C----CSEEEEEESCHHHHHHHHHTC---
T ss_pred             CCCEEEEEECCCCHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             99959998579789999999878----9----988999709889999999999983


No 165
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=85.40  E-value=1.6  Score=22.12  Aligned_cols=68  Identities=10%  Similarity=0.047  Sum_probs=45.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +.+||.=|++|+.     +-.+..|.  +|+|+|.+.|.=+.-+.+.+   .+    .-+++.+|.++...+.-++.+..
T Consensus        51 ~~i~p~~g~lL~~-----l~~~~~~k--~vLEiGt~~GySal~lA~al---~~----~g~v~tie~~~~~~~~Ar~~~~~  116 (229)
T 2avd_A           51 SMMTCEQAQLLAN-----LARLIQAK--KALDLGTFTGYSALALALAL---PA----DGRVVTCEVDAQPPELGRPLWRQ  116 (229)
T ss_dssp             GSCCHHHHHHHHH-----HHHHTTCC--EEEEECCTTSHHHHHHHTTS---CT----TCEEEEEESCSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-----HHHHHCCC--EEEEEECCCCHHHHHHHHCC---CC----CCEEEEEECCHHHHHHHHHHHHH
T ss_conf             6649999999999-----99864997--89998444689999999437---99----97899995746599999999997


Q ss_pred             CC
Q ss_conf             02
Q gi|254780410|r  133 YG  134 (362)
Q Consensus       133 ~~  134 (362)
                      .+
T Consensus       117 ag  118 (229)
T 2avd_A          117 AE  118 (229)
T ss_dssp             TT
T ss_pred             CC
T ss_conf             69


No 166
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=84.56  E-value=2  Score=21.47  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=46.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             71179999999999999998388876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   54 EISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        54 ~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      .++|.=|++|...+     .+..|.  .|+|+|.+.|.=+.-+.+.+   .|    .-+++.+|.++...+..++.+...
T Consensus        55 ~i~p~~g~~L~~L~-----~~~~ak--~iLEiGT~~GyStl~lA~al---~~----~g~v~tiE~~~~~~~~A~~~~~~a  120 (232)
T 3cbg_A           55 QISPEQAQFLGLLI-----SLTGAK--QVLEIGVFRGYSALAMALQL---PP----DGQIIACDQDPNATAIAKKYWQKA  120 (232)
T ss_dssp             SCCHHHHHHHHHHH-----HHHTCC--EEEEECCTTSHHHHHHHTTS---CT----TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHH-----HHHCCC--EEEEEECCCCHHHHHHHHHC---CC----CCEEEEEECCCCHHHHHHHHHHHC
T ss_conf             65999999999999-----974997--89998434389999999858---99----858999976741489999999986


Q ss_pred             C--CCHHC
Q ss_conf             2--31011
Q gi|254780410|r  134 G--DKINW  139 (362)
Q Consensus       134 ~--~~v~w  139 (362)
                      +  +++..
T Consensus       121 g~~~~i~~  128 (232)
T 3cbg_A          121 GVAEKISL  128 (232)
T ss_dssp             TCGGGEEE
T ss_pred             CCCCCEEE
T ss_conf             99862899


No 167
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17
Probab=84.56  E-value=1.7  Score=21.92  Aligned_cols=74  Identities=20%  Similarity=0.298  Sum_probs=48.6

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             88864576711799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      +|+.=++-.--..+-|+++.-..     +-.|.+-+++-+|.|.|..++.+++.    .    ...++..||+.|...+.
T Consensus        50 Dg~~q~~~~de~~Yhe~l~h~~l-----~~~~~pk~vLiiG~G~G~~~~~ll~~----~----~~~~i~~VEiDp~Vi~~  116 (314)
T 1uir_A           50 DKDVQSTERDEYIYHETLVHPAM-----LTHPEPKRVLIVGGGEGATLREVLKH----P----TVEKAVMVDIDGELVEV  116 (314)
T ss_dssp             TTEEEEETTTHHHHHHHHHHHHH-----HHSSCCCEEEEEECTTSHHHHHHTTS----T----TCCEEEEEESCHHHHHH
T ss_pred             CCHHHCCCCCHHHHHHHHHHHHH-----HHCCCCCEEEEECCCCHHHHHHHHHC----C----CCCEEEEECHHHHHHHH
T ss_conf             89002034417788999888888-----60999787999889837999999865----9----96779874021899999


Q ss_pred             HHHHHHH
Q ss_conf             9864111
Q gi|254780410|r  126 QKKQLAS  132 (362)
Q Consensus       126 Q~~~l~~  132 (362)
                      -++.++.
T Consensus       117 a~~~f~~  123 (314)
T 1uir_A          117 AKRHMPE  123 (314)
T ss_dssp             HHHHCHH
T ss_pred             HHHCCCC
T ss_conf             8751830


No 168
>2i7c_A Spermidine synthase; transferase, structural genomics consortium, SGC; HET: AAT 1PG; 1.71A {Plasmodium falciparum 3D7} PDB: 2hte_A* 3b7p_A* 2pwp_A*
Probab=84.54  E-value=2  Score=21.46  Aligned_cols=78  Identities=18%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|..-++..--..+-++++.-.     ..-.|.+-+++-+|.|+|.+++.++++    .    ...++.+||
T Consensus        43 ~~gr~L~LDg~~q~~~~de~~Yhe~l~h~~-----~~~~~~pk~vLiiGgG~G~~~~ellk~----~----~~~~i~~VE  109 (283)
T 2i7c_A           43 TYGKVLVLDGVIQLTEKDEFAYHEMMTHVP-----MTVSKEPKNVLVVGGGDGGIIRELCKY----K----SVENIDICE  109 (283)
T ss_dssp             SSCEEEEETTEEEEETTTHHHHHHHHHHHH-----HTTSSSCCEEEEEECTTSHHHHHHTTC----T----TCCEEEEEE
T ss_pred             CCCEEEEECCEEEEECCCCCCHHHHHHHHH-----HHCCCCCCEEEEECCCCHHHHHHHHHC----C----CCCEEEEEC
T ss_conf             877099989878675587431579998788-----652998244999838834999999974----9----963799974


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       110 iD~~Vi~~a~~~f~~  124 (283)
T 2i7c_A          110 IDETVIEVSKIYFKN  124 (283)
T ss_dssp             SCHHHHHHHHHHCTT
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             789999999987465


No 169
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=83.54  E-value=2.2  Score=21.18  Aligned_cols=60  Identities=10%  Similarity=0.055  Sum_probs=41.1

Q ss_pred             HHHHHHHHCC--CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             9999999838--8876214100786468988879999741856430121023636978999998641110
Q gi|254780410|r   66 FLICAWEQHG--FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        66 ~~~~~~~~~~--~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      |+.+++....  ......++++|.|+|..+.-+....    |    ..+++-+|+|+...+.-++++...
T Consensus        51 ~i~dlL~~~~~~~~~~~~~lDiGtGsg~I~~~L~~~~----~----~~~~~~~Di~~~al~~A~~N~~~n  112 (254)
T 2h00_A           51 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATL----N----GWYFLATEVDDMCFNYAKKNVEQN  112 (254)
T ss_dssp             HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHH----H----CCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             9999970546666777548995678789999999977----9----975999989999999999999983


No 170
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Escherichia coli O157}
Probab=83.40  E-value=2.2  Score=21.14  Aligned_cols=82  Identities=13%  Similarity=0.089  Sum_probs=48.8

Q ss_pred             CCEEECCCCCHHHHHHHHHHHH-----HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCH----HHHHCCCEEEEE
Q ss_conf             8864576711799999999999-----9999838887621410078646898887999974185----643012102363
Q gi|254780410|r   47 GDFVTAPEISQIFGEMLAIFLI-----CAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKP----DFFSVLSIYMVE  117 (362)
Q Consensus        47 GDF~Tsp~is~~Fg~~ia~~~~-----~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p----~~~~~l~~~ivE  117 (362)
                      +|+|=|.  +.-.-|....++.     +.|.+ .....++|+|+|=|.|.=..-.++.+.+..+    .-...++|+.+|
T Consensus        27 ~e~YhS~--~ga~~Es~~vFi~~~~L~~r~~~-~~~~~~~IlEiGFG~GlNfl~t~~~~~~~~~~~~~~~~~~L~yisiE  103 (257)
T 2qy6_A           27 DDVYFSN--DNGLEETRYVFLGGNQLEARFPE-HPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFE  103 (257)
T ss_dssp             TEESSCT--TTHHHHHHHHHHHHTTHHHHGGG-CSSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEE
T ss_pred             CCCCCCC--CCHHHHHHHHHHCCCCCHHHHHC-CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             9746798--77999999972366998698863-99885499994786108999999999974342655541279999615


Q ss_pred             CCHHHHHHHHHHHH
Q ss_conf             69789999986411
Q gi|254780410|r  118 TSERLTLIQKKQLA  131 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~  131 (362)
                      ..|--.+..++...
T Consensus       104 ~~Pl~~~~l~~~~~  117 (257)
T 2qy6_A          104 KFPLTRADLALAHQ  117 (257)
T ss_dssp             SSCCCHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHH
T ss_conf             77766778876541


No 171
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=83.23  E-value=2.3  Score=21.10  Aligned_cols=72  Identities=21%  Similarity=0.269  Sum_probs=49.0

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             88864576711799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      +|++-.+..---.+-++++.-..     +..|.+-+|+-+|.|+|..++.+++.     |    ..+...||+.+...+.
T Consensus        48 Dg~~q~~~~de~~Y~e~l~h~~l-----~~~~~p~~VLiiG~G~G~~~~~~l~~-----~----~~~v~~VEiD~~vi~~  113 (281)
T 1mjf_A           48 DGTVQLVTLGERSYHEPLVHPAM-----LAHPKPKRVLVIGGGDGGTVREVLQH-----D----VDEVIMVEIDEDVIMV  113 (281)
T ss_dssp             TTEEEEETTTTHHHHHHHHHHHH-----HHSSCCCEEEEEECTTSHHHHHHTTS-----C----CSEEEEEESCHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHH-----HCCCCCCEEEEEECCCHHHHHHHHHC-----C----CCEEEEECCCHHHHHH
T ss_conf             89232425507777898886887-----50999887999928943999999843-----8----8358997068899999


Q ss_pred             HHHHHH
Q ss_conf             986411
Q gi|254780410|r  126 QKKQLA  131 (362)
Q Consensus       126 Q~~~l~  131 (362)
                      -++.++
T Consensus       114 a~~~~~  119 (281)
T 1mjf_A          114 SKDLIK  119 (281)
T ss_dssp             HHHHTC
T ss_pred             HHHHHH
T ss_conf             998511


No 172
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A*
Probab=82.97  E-value=1.1  Score=23.37  Aligned_cols=48  Identities=13%  Similarity=0.119  Sum_probs=33.4

Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   74 HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        74 ~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      .+.+.. .|+|+|.|.|.++..+.+.    .|+    .+++-||+|+.+.+.-+.+.
T Consensus        21 ~~~~~~-~vLDvGcG~G~~~~~la~~----~p~----~~vvGvD~s~~~l~~a~~~~   68 (225)
T 3p2e_A           21 IGQFDR-VHIDLGTGDGRNIYKLAIN----DQN----TFYIGIDPVKENLFDISKKI   68 (225)
T ss_dssp             HTTCSE-EEEEETCTTSHHHHHHHHT----CTT----EEEEEECSCCGGGHHHHHHH
T ss_pred             HCCCCC-EEEEEEEECCHHHHHHHHH----CCC----CEEEEEECCHHHHHHHHHHH
T ss_conf             488999-8999227673999999986----899----78999867889999999888


No 173
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=82.88  E-value=1.4  Score=22.64  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=44.9

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-+|- ..-.+-+++..-      .+-.+.+-+++-+|.|+|..++.+|++    .     ..++.+||
T Consensus       155 ~~Gr~L~LDg~~q~te-~D~~Y~e~l~~~------~l~~~~pk~VLIIGGGdG~~~revlk~----~-----~~~V~~VE  218 (364)
T 2qfm_A          155 QFGNILILSGDVNLAE-SDLAYTRAIMGS------GKEDYTGKDVLILGGGDGGILCEIVKL----K-----PKMVTMVE  218 (364)
T ss_dssp             TTEEEEEETTEEEEET-TCHHHHHHHTTT------TCCCCTTCEEEEEECTTCHHHHHHHTT----C-----CSEEEEEE
T ss_pred             CCCEEEEECCEEEEEC-CCHHHHHHHHHH------HHHCCCCCEEEEEECCCHHHHHHHHHC----C-----CCEEEEEE
T ss_conf             8753999989136866-738899998625------754589885999969943999999861----7-----84289971


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       219 ID~~Vve~akk~~~~  233 (364)
T 2qfm_A          219 IDQMVIDGCKKYMRK  233 (364)
T ss_dssp             SCHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             038999999986565


No 174
>3bwc_A Spermidine synthase; SAM, SGPP, structural genomics, PSI, protein structure initiative; HET: MSE SAM; 2.30A {Trypanosoma cruzi strain cl brener} PDB: 3bwb_A*
Probab=82.58  E-value=2.4  Score=20.93  Aligned_cols=79  Identities=19%  Similarity=0.286  Sum_probs=54.6

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-++-.=--.+-|+++.-     .....|.+-+|+-+|.|+|..++.++++     |   ...++.+||
T Consensus        60 ~~G~~L~LDg~~q~se~De~~YhE~l~h~-----~l~~h~~pk~VLIiGgGdG~~~rellk~-----~---~v~~v~~VE  126 (304)
T 3bwc_A           60 PWGTVMALDGCIQVTDYDEFVYHEVLGHT-----SLCSHPKPERVLIIGGGDGGVLREVLRH-----G---TVEHCDLVD  126 (304)
T ss_dssp             SCCEEEEETTEEEEETTTHHHHHHHHHHH-----HHTTSSSCCEEEEEECTTSHHHHHHHTC-----T---TCCEEEEEE
T ss_pred             CCCCEEEECCEEEEECCCHHHHHHHHHHH-----HHHCCCCCCEEEEECCCCHHHHHHHHHC-----C---CCCEEEEEE
T ss_conf             63418999896555056588899998888-----8743999786999838937999999965-----9---942799980


Q ss_pred             CCHHHHHHHHHHHHHC
Q ss_conf             6978999998641110
Q gi|254780410|r  118 TSERLTLIQKKQLASY  133 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~~  133 (362)
                      +.+...+.-++.++..
T Consensus       127 ID~~Vi~~~~~~~p~~  142 (304)
T 3bwc_A          127 IDGEVMEQSKQHFPQI  142 (304)
T ss_dssp             SCHHHHHHHHHHCHHH
T ss_pred             CCHHHHHHHHHHCHHH
T ss_conf             5889999999865443


No 175
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=82.09  E-value=2.5  Score=20.81  Aligned_cols=74  Identities=24%  Similarity=0.317  Sum_probs=52.6

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHH
Q ss_conf             88864576711799999999999999983888762141007864689888799997418564301210236369789999
Q gi|254780410|r   46 VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLI  125 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~  125 (362)
                      +|+.-++-.-...+-|+++.-..     ...|.+-+++-+|.|+|..++.++++    .    ...++.+||+.+...+.
T Consensus        48 dg~~q~~~~de~~Yhe~l~h~~l-----~~~~~pk~VLiiGgG~G~~~~~~l~~----~----~~~~v~~VEiD~~Vi~~  114 (275)
T 1iy9_A           48 DGMVMTSEKDEFVYHEMVAHVPL-----FTHPNPEHVLVVGGGDGGVIREILKH----P----SVKKATLVDIDGKVIEY  114 (275)
T ss_dssp             TTEEEEETTTHHHHHHHHHHHHH-----HHSSSCCEEEEESCTTCHHHHHHTTC----T----TCSEEEEEESCHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHH-----HCCCCCCEEEEEECCCHHHHHHHHHC----C----CCCEEEEEEECHHHHHH
T ss_conf             99874530780066799877887-----50999675999907963999999965----9----96469999708899999


Q ss_pred             HHHHHHH
Q ss_conf             9864111
Q gi|254780410|r  126 QKKQLAS  132 (362)
Q Consensus       126 Q~~~l~~  132 (362)
                      -++.++.
T Consensus       115 a~~~~~~  121 (275)
T 1iy9_A          115 SKKFLPS  121 (275)
T ss_dssp             HHHHCHH
T ss_pred             HHHHCHH
T ss_conf             9985723


No 176
>2pt6_A Spermidine synthase; transferase, structural genomics consortium, SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum 3D7} PDB: 2pss_A* 2pt9_A*
Probab=82.07  E-value=2.5  Score=20.81  Aligned_cols=78  Identities=18%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-++-.=--.+-|+++.-..     ...|.+-+|+=+|.|+|..++.++++    .    ...++.+||
T Consensus        81 ~~Gr~L~LDg~~q~te~de~~YhE~l~h~pl-----~~~~~pk~VLIiGgGdG~~~rellk~----~----~~~~v~~VE  147 (321)
T 2pt6_A           81 TYGKVLVLDGVIQLTEKDEFAYHEMMTHVPM-----TVSKEPKNVLVVGGGDGGIIRELCKY----K----SVENIDICE  147 (321)
T ss_dssp             SSCEEEEETTEEEEETTTHHHHHHHHHHHHH-----HHSSSCCEEEEEECTTCHHHHHHTTC----T----TCCEEEEEE
T ss_pred             CCCEEEEECCEEEEECCCHHHHHHHHHHHHH-----HCCCCCCEEEEECCCCHHHHHHHHHC----C----CCCCEEEEC
T ss_conf             8651999988524524657688899871686-----51999576999848953999999972----9----964147852


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       148 ID~~Vv~~ak~~f~~  162 (321)
T 2pt6_A          148 IDETVIEVSKIYFKN  162 (321)
T ss_dssp             SCHHHHHHHHHHCTT
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             579999999986266


No 177
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus}
Probab=82.05  E-value=2.5  Score=20.80  Aligned_cols=53  Identities=13%  Similarity=0.129  Sum_probs=37.6

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHC
Q ss_conf             88762141007864689888799997418564301210236369789999986411102-31011
Q gi|254780410|r   76 FPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINW  139 (362)
Q Consensus        76 ~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w  139 (362)
                      .|.. .|+++|+|+|.++.-+.    +  |    .-+++-+|.|+...+.-+++....+ ++|.+
T Consensus        21 ~~~~-~VLD~gcG~G~~t~~LA----~--~----~~~V~aiDis~~al~~a~~n~~~~~l~nv~~   74 (185)
T 3mti_A           21 DDES-IVVDATMGNGNDTAFLA----G--L----SKKVYAFDVQEQALGKTSQRLSDLGIENTEL   74 (185)
T ss_dssp             CTTC-EEEESCCTTSHHHHHHH----T--T----SSEEEEEESCHHHHHHHHHHHHHHTCCCEEE
T ss_pred             CCCC-EEEEEEEECCHHHHHHH----H--C----CCEEEECCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             9999-99999638889999998----2--6----9989975898788878999999829984899


No 178
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=81.76  E-value=2.4  Score=20.93  Aligned_cols=55  Identities=15%  Similarity=0.155  Sum_probs=38.2

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHC
Q ss_conf             8762141007864689888799997418564301210236369789999986411102--31011
Q gi|254780410|r   77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINW  139 (362)
Q Consensus        77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w  139 (362)
                      |..-.|+++|.|+|.|+.-+++.    .    ...+.+.+|+|+...+.-++++...+  ++|.+
T Consensus        20 ~~g~~vlDiGcg~G~l~~~l~~~----~----~~~~V~avDi~~~~l~~A~~n~~~~gl~~~I~~   76 (244)
T 3gnl_A           20 TKNERIADIGSDHAYLPCFAVKN----Q----TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDV   76 (244)
T ss_dssp             CSSEEEEEETCSTTHHHHHHHHT----T----SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHC----C----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             99998999718648999999980----9----998899963889999999999998299986799


No 179
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=81.33  E-value=2.7  Score=20.63  Aligned_cols=78  Identities=22%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-.+-.=--.+-|+++.--.     +-.|.+-+|+-+|.|+|..++.+++.    .    ...++.+||
T Consensus        55 ~~g~~l~LDg~~q~~e~de~~YhE~l~h~pl-----~~~~~pk~VLiiGgG~G~~~~e~l~~----~----~~~~v~~VE  121 (296)
T 1inl_A           55 DLGVVFALDGITMTTEKDEFMYHEMLAHVPM-----FLHPNPKKVLIIGGGDGGTLREVLKH----D----SVEKAILCE  121 (296)
T ss_dssp             TTEEEEEETTEEEEETTTHHHHHHHHHHHHH-----HHSSSCCEEEEEECTTCHHHHHHTTS----T----TCSEEEEEE
T ss_pred             CCCEEEEECCEEEEECCCCHHHHHHHHHHHH-----HHCCCCCEEEEECCCCHHHHHHHHHC----C----CCCCEEEEC
T ss_conf             8545999899654403882032698871887-----61999787999879827999999964----9----977178863


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.|...+.-++.++.
T Consensus       122 ID~~Vi~~a~~~~~~  136 (296)
T 1inl_A          122 VDGLVIEAARKYLKQ  136 (296)
T ss_dssp             SCHHHHHHHHHHCHH
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             578999999987676


No 180
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=79.08  E-value=3.1  Score=20.15  Aligned_cols=75  Identities=9%  Similarity=0.040  Sum_probs=50.5

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHH----------HCCCEE
Q ss_conf             8888645767117999999999999999838887621410078646898887999974185643----------012102
Q gi|254780410|r   45 AVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFF----------SVLSIY  114 (362)
Q Consensus        45 ~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~----------~~l~~~  114 (362)
                      +.|-|||-.+|..+.        +.+.   .-...-.|++..+|+|.|.....+++.....+..          ....++
T Consensus       147 ~~GqffTP~~Iv~~m--------v~ll---~p~~~~~I~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~  215 (541)
T 2ar0_A          147 GAGQYFTPRPLIKTI--------IHLL---KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFI  215 (541)
T ss_dssp             ---CCCCCHHHHHHH--------HHHH---CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEE
T ss_pred             CCCEECCCHHHHHHH--------HHHH---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             587567989999999--------9862---89988730465778560579999999984366211104678888876663


Q ss_pred             EEECCHHHHHHHHHHH
Q ss_conf             3636978999998641
Q gi|254780410|r  115 MVETSERLTLIQKKQL  130 (362)
Q Consensus       115 ivE~s~~l~~~Q~~~l  130 (362)
                      -+|+++.....-+-.+
T Consensus       216 G~E~~~~~~~la~~nl  231 (541)
T 2ar0_A          216 GLELVPGTRRLALMNC  231 (541)
T ss_dssp             EEESCHHHHHHHHHHH
T ss_pred             HHHCCHHHHHHHHHHH
T ss_conf             0206699999998646


No 181
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=78.17  E-value=2  Score=21.41  Aligned_cols=78  Identities=26%  Similarity=0.361  Sum_probs=52.2

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-.+-.--..+-|+++.--.     ...|.+-+|+=+|.|+|..++.++++    .    ...++.+||
T Consensus        73 ~~G~~L~LDg~~q~te~De~~YhE~l~h~pl-----~~~~~pk~VLIiGgGdG~~~rellk~----~----~v~~v~~VE  139 (314)
T 2b2c_A           73 TYGNVLVLDGIVQATERDEFSYQEMLAHLPM-----FAHPDPKRVLIIGGGDGGILREVLKH----E----SVEKVTMCE  139 (314)
T ss_dssp             TTEEEEEETTEEEEESSSSSHHHHHHHHHHH-----HHSSSCCEEEEESCTTSHHHHHHTTC----T----TCCEEEEEC
T ss_pred             CCCCEEEECCEEEEECCCHHHHHHHHHHHHH-----HCCCCCCEEEEECCCCHHHHHHHHHC----C----CCCEEEEEE
T ss_conf             8671899999304633758888998764786-----53999787999889846999999974----9----954589996


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       140 ID~~Vi~~a~~~~~~  154 (314)
T 2b2c_A          140 IDEMVIDVAKKFLPG  154 (314)
T ss_dssp             SCHHHHHHHHHHCTT
T ss_pred             ECHHHHHHHHHHCHH
T ss_conf             088999999763633


No 182
>2e58_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase, 2-codon SETS; HET: SAM; 2.50A {Aquifex aeolicus VF5}
Probab=78.17  E-value=3.3  Score=19.97  Aligned_cols=91  Identities=18%  Similarity=0.193  Sum_probs=55.3

Q ss_pred             HHHCCCCCCCCC---CCC----CCC-CCCCEEECCCCCHHHHHHHHHHHHH--HHHHCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf             871089878646---898----888-8888645767117999999999999--999838887621410078646898887
Q gi|254780410|r   27 LCVADPEFGYYS---TCN----PFG-AVGDFVTAPEISQIFGEMLAIFLIC--AWEQHGFPSCVRLVELGPGRGIMMLDI   96 (362)
Q Consensus        27 ~aLy~p~~GYY~---~~~----~~G-~~GDF~Tsp~is~~Fg~~ia~~~~~--~~~~~~~p~~~~ivE~GaG~G~La~di   96 (362)
                      -.||+|+.+=+.   +.+    -+. .-||.|-|..-+ ...|+...++..  +.+......+++|+|+|=|.|.=+.-.
T Consensus        36 ~~~~~~~~~~~ei~~T~DGS~Tl~s~~f~E~YHS~~~G-Al~ES~~vFI~~~~l~~r~~~~~~i~ILEiGFGtGlN~l~t  114 (308)
T 2e58_A           36 RFAYNPEESGQEIADTADGSKTLIHKTYGEPYHSQTAG-AIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVA  114 (308)
T ss_dssp             HHCCCTTCCCEEEEECTTSCEEEEETTTTEESSCTTTC-HHHHHHHHTHHHHTHHHHTTTCSEEEEEEECCTTSHHHHHH
T ss_pred             HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCHHHHHH
T ss_conf             87538454577458999998677357658866799876-89999998703577267753699719999566512899999


Q ss_pred             HHHHHHCCHHHHHCCCEEEEECCH
Q ss_conf             999974185643012102363697
Q gi|254780410|r   97 LRVICKLKPDFFSVLSIYMVETSE  120 (362)
Q Consensus        97 L~~l~~~~p~~~~~l~~~ivE~s~  120 (362)
                      ++.+.+.+|.  ..++|+-+|..+
T Consensus       115 l~~~~~~~~~--~~l~~isiE~~~  136 (308)
T 2e58_A          115 LKHLWEVNPK--LRVEIISFEKEL  136 (308)
T ss_dssp             HHHHHHHCTT--CEEEEEEEESSC
T ss_pred             HHHHHHHCCC--CCEEEEEHHHHH
T ss_conf             9999973987--624886403879


No 183
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=78.06  E-value=1.6  Score=22.22  Aligned_cols=75  Identities=12%  Similarity=0.056  Sum_probs=51.7

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|...|+ +--..+-|+++.     ...+-+|.+-+|+-+|.|+|..++.++++     |     .+..+||
T Consensus        38 ~~G~~l~Ldg~~~~~-~~~~~yhE~l~h-----~pl~~hp~pk~VLiIGgG~G~~~re~lk~-----~-----~~v~~VE  101 (262)
T 2cmg_A           38 DFGEIAMLNRQLLFK-NFLHIESELLAH-----MGGCTKKELKEVLIVDGFDLELAHQLFKY-----D-----THIDFVQ  101 (262)
T ss_dssp             TTEEEEEETTEEEEG-GGTHHHHHHHHH-----HHHTTSSCCCEEEEESSCCHHHHHHHTTS-----S-----CEEEEEC
T ss_pred             CCCEEEEECCEEEEE-CCCCCCHHHHHH-----HHHHCCCCCCEEEEECCCCHHHHHHHHCC-----C-----CEEEEEE
T ss_conf             862499998907664-243312287645-----78753998677999459966999998458-----9-----7479998


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       102 iD~~Vi~~a~~~fp~  116 (262)
T 2cmg_A          102 ADEKILDSFISFFPH  116 (262)
T ss_dssp             SCHHHHGGGTTTSTT
T ss_pred             ECHHHHHHHHHHCCC
T ss_conf             389999999986842


No 184
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=77.54  E-value=0.92  Score=23.79  Aligned_cols=63  Identities=21%  Similarity=0.244  Sum_probs=38.7

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHC
Q ss_conf             9999998388876214100786468988879999741856430121023636978999998641110231011
Q gi|254780410|r   67 LICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINW  139 (362)
Q Consensus        67 ~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w  139 (362)
                      +.+... .+..+.-.++|+|+|.|.+.  ++    ...+.   .-+++.++.|+..++..++.+........|
T Consensus        61 l~~~~~-~g~~~G~~lLDvG~Gpgi~~--~l----~a~~~---~~~I~~~D~s~~~~~~~~kw~~~~~~~~dw  123 (289)
T 2g72_A           61 LAQTFA-TGEVSGRTLIDIGSGPTVYQ--LL----SACSH---FEDITMTDFLEVNRQELGRWLQEEPGAFNW  123 (289)
T ss_dssp             HHHHHH-TSCSCCSEEEEETCTTCCGG--GT----TGGGG---CSEEEEECSCHHHHHHHHHHHTTCTTCCCC
T ss_pred             HHHHHC-CCCCCCCEEEEECCCCCHHH--HH----HHCCC---CCEEEEECCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             999857-88878988999574713678--88----75646---781488549899999999887528776672


No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=75.55  E-value=3.9  Score=19.49  Aligned_cols=68  Identities=15%  Similarity=0.076  Sum_probs=44.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             67117999999999999999838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      ..+||.=|++|+.     +-.+..|.  .|+|+|.+.|.=+.-+.+.+.    +   .-+++.+|.++...+.-++.+..
T Consensus        61 m~i~~~~g~~L~~-----L~~~~~ak--~iLEIGT~~GySal~~a~al~----~---~g~l~tie~~~~~~~~Ar~~~~~  126 (247)
T 1sui_A           61 MTTSADEGQFLSM-----LLKLINAK--NTMEIGVYTGYSLLATALAIP----E---DGKILAMDINKENYELGLPVIKK  126 (247)
T ss_dssp             GSCCHHHHHHHHH-----HHHHTTCC--EEEEECCGGGHHHHHHHHHSC----T---TCEEEEEESCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-----HHHHHCCC--EEEEEECCCCHHHHHHHHHCC----C---CCEEEEEECCHHHHHHHHHHHHH
T ss_conf             6759999999999-----99864997--799963215899999998585----4---63699985177878999999986


Q ss_pred             CC
Q ss_conf             02
Q gi|254780410|r  133 YG  134 (362)
Q Consensus       133 ~~  134 (362)
                      .+
T Consensus       127 ag  128 (247)
T 1sui_A          127 AG  128 (247)
T ss_dssp             TT
T ss_pred             HH
T ss_conf             20


No 186
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} SCOP: c.66.1.47 PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=75.55  E-value=3  Score=20.30  Aligned_cols=44  Identities=14%  Similarity=0.100  Sum_probs=33.5

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             21410078646898887999974185643012102363697899999864111
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      -.|+++|||.|.++.-++..         ...+.+.+|.||...+.-++++..
T Consensus       127 ~~VlDl~aG~G~~~l~~a~~---------~~~~V~avD~n~~a~~~~~~N~~~  170 (278)
T 2frn_A          127 ELVVDMFAGIGHLSLPIAVY---------GKAKVIAIEKDPYTFKFLVENIHL  170 (278)
T ss_dssp             CEEEETTCTTTTTHHHHHHH---------TCCEEEEECCCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             88999177051999999997---------498699997999999999999998


No 187
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A*
Probab=75.34  E-value=4  Score=19.46  Aligned_cols=78  Identities=23%  Similarity=0.347  Sum_probs=51.8

Q ss_pred             CCCC----CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             8888----888645767117999999999999999838887621410078646898887999974185643012102363
Q gi|254780410|r   42 PFGA----VGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        42 ~~G~----~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      .+|+    +|+.-++-.--..+-|+++.--     .+-.|.+-+++-+|.|+|..++.++++     |   ...+..+||
T Consensus        60 ~~G~~L~LDg~~q~~e~de~~YhE~l~h~p-----l~~~~~pk~VLIiGgG~G~~~~ellk~-----~---~~~~v~~VE  126 (304)
T 2o07_A           60 TYGNVLVLDGVIQCTERDEFSYQEMIANLP-----LCSHPNPRKVLIIGGGDGGVLREVVKH-----P---SVESVVQCE  126 (304)
T ss_dssp             SSCEEEEETTEEEEETTTHHHHHHHHHHHH-----HTTSSSCCEEEEEECTTSHHHHHHTTC-----T---TCCEEEEEE
T ss_pred             CCCEEEEECCCEEECCCCHHHHHHHHHHHH-----HHCCCCCCEEEEECCCCHHHHHHHHHC-----C---CCCEEEEEC
T ss_conf             855199999930123564888889888799-----861999786999879945999999865-----9---853268760


Q ss_pred             CCHHHHHHHHHHHHH
Q ss_conf             697899999864111
Q gi|254780410|r  118 TSERLTLIQKKQLAS  132 (362)
Q Consensus       118 ~s~~l~~~Q~~~l~~  132 (362)
                      +.+...+.-++.++.
T Consensus       127 iD~~Vi~~a~~~~~~  141 (304)
T 2o07_A          127 IDEDVIQVSKKFLPG  141 (304)
T ss_dssp             SCHHHHHHHHHHCHH
T ss_pred             CCHHHHHHHHHHHHH
T ss_conf             469999999985555


No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=72.21  E-value=4.7  Score=18.96  Aligned_cols=49  Identities=10%  Similarity=0.122  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             8887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      -.|. -.|+++|+|.|.++.-+++..        ....++.+|.||...+.-++++..
T Consensus       117 v~~g-e~VlDl~aG~G~~~i~~ak~~--------~~~~V~aiDinp~av~~l~~N~~~  165 (272)
T 3a27_A          117 SNEN-EVVVDMFAGIGYFTIPLAKYS--------KPKLVYAIEKNPTAYHYLCENIKL  165 (272)
T ss_dssp             CCTT-CEEEETTCTTTTTHHHHHHHT--------CCSEEEEEECCHHHHHHHHHHHHH
T ss_pred             CCCC-CEEEEECCCCCHHHHHHHHCC--------CCEEEEEEECCHHHHHHHHHHHHH
T ss_conf             5899-999993786588999987506--------950999995999999999999998


No 189
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=69.50  E-value=5.3  Score=18.56  Aligned_cols=65  Identities=20%  Similarity=0.135  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             999999999999983888762141007864689888799997418564301210236369789999986411102
Q gi|254780410|r   60 GEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG  134 (362)
Q Consensus        60 g~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~  134 (362)
                      ++.+......++.. +....-.|+++|.|+|+...-.+   ..      ..-+++.||+|+.+.+.-+++....+
T Consensus       155 ~~~~~~r~~~~~~~-~~~~g~~vldlg~g~g~~l~~~l---~~------~~~~V~~vDi~~~~l~~a~~~a~~~g  219 (373)
T 2qm3_A          155 PETTVARVILMHTR-GDLENKDIFVLGDDDLTSIALML---SG------LPKRIAVLDIDERLTKFIEKAANEIG  219 (373)
T ss_dssp             HHHHHHHHHHHHHT-TCSTTCEEEEESCTTCHHHHHHH---HT------CCSEEEEECSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHC-CCCCCCEEEEEECCCHHHHHHHH---HC------CCCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf             88999999999863-77789979999799249999999---76------99989999797999999999999819


No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.79A {Cyanidioschyzon merolae strain 10D}
Probab=69.31  E-value=2.1  Score=21.38  Aligned_cols=64  Identities=13%  Similarity=0.136  Sum_probs=33.8

Q ss_pred             CCHHHHH-------HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEC-CHHHHHHH
Q ss_conf             1179999-------999999999998388876214100786468988879999741856430121023636-97899999
Q gi|254780410|r   55 ISQIFGE-------MLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVET-SERLTLIQ  126 (362)
Q Consensus        55 is~~Fg~-------~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~-s~~l~~~Q  126 (362)
                      -+|++|.       .+|.|+.+.   -..-..-+|+|+|||.|-...-..    ...     .-..++.+. .+.+....
T Consensus        52 ~~~~~g~~lW~aa~~La~~L~~~---~~~~~Gk~VLELGaGtGl~gl~aA----~~g-----a~~Vv~tD~~~~~~~~~l  119 (281)
T 3bzb_A           52 EHPLWTSHVWSGARALADTLCWQ---PELIAGKTVCELGAGAGLVSIVAF----LAG-----ADQVVATDYPDPEILNSL  119 (281)
T ss_dssp             ----------CHHHHHHHHHHHC---GGGTTTCEEEETTCTTSHHHHHHH----HTT-----CSEEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEHHHHHHHHHHHHHC---HHHCCCCEEEEECCHHHHHHHHHH----HHC-----CCEEEEEECCCHHHHHHH
T ss_conf             88865646567999999999839---233099829997855229999999----858-----987999976967889999


Q ss_pred             HHHH
Q ss_conf             8641
Q gi|254780410|r  127 KKQL  130 (362)
Q Consensus       127 ~~~l  130 (362)
                      +.++
T Consensus       120 ~~Nv  123 (281)
T 3bzb_A          120 ESNI  123 (281)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 191
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, joint center for structural genomics, JCSG; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=69.22  E-value=5.4  Score=18.52  Aligned_cols=48  Identities=15%  Similarity=0.216  Sum_probs=31.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             621410078646898887999974185643012102363697899999864111
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      +-.+|++||..|.....++.....      ...+++.+|++|...+..+++++.
T Consensus       227 nevfIDVGAniG~~s~~f~~~~~~------~~~kV~AFEPnp~n~~~L~~Ni~~  274 (409)
T 2py6_A          227 SEKMVDCGASIGESLAGLIGVTKG------KFERVWMIEPDRINLQTLQNVLRR  274 (409)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHHTS------CCSEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCHHHHHHHHHCCC------CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             988999885888889999996689------999899994878999999999986


No 192
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=63.86  E-value=6.8  Score=17.83  Aligned_cols=138  Identities=14%  Similarity=0.127  Sum_probs=72.3

Q ss_pred             CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC---CC
Q ss_conf             984899999999981898049999998710898786468988888888645767117999999999999999838---88
Q gi|254780410|r    1 MENKLIRKIVNLIKKNGQMTVDQYFALCVADPEFGYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHG---FP   77 (362)
Q Consensus         1 ~~~~L~~~i~~~I~~~G~i~f~~fM~~aLy~p~~GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~---~p   77 (362)
                      |++.-.+.+.+-+++-|.-.-++--+...|....--+.+...       .||+.-   .-+.+.+.+.+.+.-..   .+
T Consensus        10 ~~~~~~~~l~~~~~~lg~~~~~q~~~l~~y~~lL~~wN~~~N-------Lt~~~~---~~~~~~rHilDSl~i~~~~~~~   79 (249)
T 3g89_A           10 LSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVN-------LTALRG---EEEVVVKHFLDSLTLLRLPLWQ   79 (249)
T ss_dssp             CCHHHHHHHHHHHHHHTCCCGGGHHHHHHHHHHHHHC-----------------C---HHHHHHHHHHHHHGGGGSSCCC
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC-------CEECCC---HHHHHHHHHHHHHHHHHCCCCC
T ss_conf             697899999999998399838999999999999998555532-------204589---8999999999999875314677


Q ss_pred             CCCEEEEECCCCH--HHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC-CHHCC-CCHHHCCC-----
Q ss_conf             7621410078646--898887999974185643012102363697899999864111023-10110-43444456-----
Q gi|254780410|r   78 SCVRLVELGPGRG--IMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGD-KINWY-TSLADVPL-----  148 (362)
Q Consensus        78 ~~~~ivE~GaG~G--~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~-~v~w~-~~l~~~~~-----  148 (362)
                      ..-+++++|+|.|  -+...|+      .|+    .++++||.+..-....++...+++- .+.-+ ...+++..     
T Consensus        80 ~~~~vlDiGSGaG~PGipLAI~------~p~----~~v~LvEs~~KK~~FL~~v~~~LgL~Nv~vi~~R~E~~~~~~~~~  149 (249)
T 3g89_A           80 GPLRVLDLGTGAGFPGLPLKIV------RPE----LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHR  149 (249)
T ss_dssp             SSCEEEEETCTTTTTHHHHHHH------CTT----CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTT
T ss_pred             CCCEEEECCCCCCCCEEEEEEE------CCC----CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC
T ss_conf             8978984269999640578783------698----329998082789999999999829998458877878704331235


Q ss_pred             -CCEEEEEECC
Q ss_conf             -9569998122
Q gi|254780410|r  149 -GFTFLVANEF  158 (362)
Q Consensus       149 -~~~iiiaNE~  158 (362)
                       ...+++|.-|
T Consensus       150 ~~fD~v~aRAv  160 (249)
T 3g89_A          150 EAYARAVARAV  160 (249)
T ss_dssp             TCEEEEEEESS
T ss_pred             CCCEEEEECCC
T ss_conf             55005765552


No 193
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=63.53  E-value=6.9  Score=17.79  Aligned_cols=63  Identities=19%  Similarity=0.189  Sum_probs=37.2

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE--EEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEE
Q ss_conf             457671179999999999999998388876214--10078646898887999974185643012102363
Q gi|254780410|r   50 VTAPEISQIFGEMLAIFLICAWEQHGFPSCVRL--VELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVE  117 (362)
Q Consensus        50 ~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~i--vE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE  117 (362)
                      +...+-..-||+.||..+.+.   ...|..+..  =|+|||.=+|++.+++.+.-..  ...+-+|.+++
T Consensus         8 l~~e~~t~~lg~~la~~l~~~---~~~~g~ii~L~G~LGaGKTtf~r~i~~~lg~~~--~V~SPTF~l~~   72 (158)
T 1htw_A            8 IPDEFSMLRFGKKFAEILLKL---HTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQG--NVKSPTYTLVE   72 (158)
T ss_dssp             ECSHHHHHHHHHHHHHHHHHH---CCSSCEEEEEECSTTSSHHHHHHHHHHHTTCCS--CCCCCTTTCEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHC---CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC--CCCCCCEEEEH
T ss_conf             909999999999999998751---689984999988986889999999999827666--67898334100


No 194
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, nucleus, phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=57.35  E-value=4.2  Score=19.25  Aligned_cols=22  Identities=18%  Similarity=0.318  Sum_probs=17.4

Q ss_pred             CCCCCCEEEEECCCCHHHHHHH
Q ss_conf             8887621410078646898887
Q gi|254780410|r   75 GFPSCVRLVELGPGRGIMMLDI   96 (362)
Q Consensus        75 ~~p~~~~ivE~GaG~G~La~di   96 (362)
                      ..|....|+++|.|+|.++..+
T Consensus        64 ~~~~~~~IlDiGCG~G~~~~~l   85 (215)
T 2zfu_A           64 QRPASLVVADFGCGDCRLASSI   85 (215)
T ss_dssp             TSCTTSCEEEETCTTCHHHHHC
T ss_pred             HCCCCCEEEEECCCCCHHHHHH
T ss_conf             0668887998327833999863


No 195
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=54.93  E-value=9.6  Score=16.82  Aligned_cols=160  Identities=13%  Similarity=0.111  Sum_probs=73.9

Q ss_pred             HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC----CC---HH
Q ss_conf             999999983888762141007864689888799997418564301210236369789999986411102----31---01
Q gi|254780410|r   66 FLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG----DK---IN  138 (362)
Q Consensus        66 ~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~----~~---v~  138 (362)
                      |+++.+++.+.   -.|+++|-|.|.|...+++.     |.  ....+.-|++|...-++-+++|....    .+   +.
T Consensus       712 aVl~iLr~~~a---kkVlDLGCGEGkLL~~LL~~-----~~--~iE~IvGVDIS~~~Le~A~~rL~~dl~~~r~r~~~V~  781 (950)
T 3htx_A          712 YALKHIRESSA---STLVDFGCGSGSLLDSLLDY-----PT--SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT  781 (950)
T ss_dssp             HHHHHHHHSCC---SEEEEETCSSSHHHHHHTSS-----CC--CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred             HHHHHHHHCCC---CEEEECCCCCCHHHHHHHCC-----CC--CEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEE
T ss_conf             99999987599---88997388870999998628-----76--6007999977999999998744841135445765689


Q ss_pred             -CCCCHHHC---CCCCEEEEEECCCCCCCEEEEEEEC----CCCEEEEEEEE-ECCC--EEECCCCCCCCC---CCCCCC
Q ss_conf             -10434444---5695699981228875235899915----66468998996-0795--352257643432---234633
Q gi|254780410|r  139 -WYTSLADV---PLGFTFLVANEFFDSLPIKQFVMTE----HGIRERMIDID-QHDS--LVFNIGDHEIKS---NFLTCS  204 (362)
Q Consensus       139 -w~~~l~~~---~~~~~iiiaNE~lDAlPv~~~~~~~----~~w~E~~V~~~-~~~~--~~~~~~~~~~~~---~~~~~~  204 (362)
                       |.-++.+.   -.+...+++=|+.--|+-.+.-.-.    +..+=+.|-+. .|-.  ..|...+.....   .-....
T Consensus       782 LyqGSIt~~D~RL~GfDAvV~iEVIEHLDpe~L~afe~vVFG~~rPkvVIVTTPNaEYNvlF~~l~~~~~~~~~~~p~~~  861 (950)
T 3htx_A          782 LYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSEPQLP  861 (950)
T ss_dssp             EEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGGHHHHTCC------------CCS
T ss_pred             EEECCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             99446555243104887699898750589889988999866315898699938971564365766777666555666667


Q ss_pred             CCCCCC-EECCCHHH-HHHHHHHHHHHHHCCEEEEEE
Q ss_conf             165684-11279347-899999999762057059996
Q gi|254780410|r  205 DYFLGA-IFENSPCR-DREMQSISDRLACDGGTAIVI  239 (362)
Q Consensus       205 ~~~~g~-~~E~~~~~-~~~~~~i~~~l~~~~G~~L~i  239 (362)
                      .+.+.+ ++|+.-.. ..|...++.+.    |+-..|
T Consensus       862 ~FRH~DHKFEWTRaEFq~WA~~VA~ry----gYsVeF  894 (950)
T 3htx_A          862 KFRNHDHKFEWTREQFNQWASKLGKRH----NYSVEF  894 (950)
T ss_dssp             SCSCSSCSCCBCHHHHHHHHHHHHHHT----TEEEEE
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHH----CCEEEE
T ss_conf             768898788759999999999999984----967999


No 196
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=52.75  E-value=10  Score=16.59  Aligned_cols=68  Identities=15%  Similarity=0.134  Sum_probs=43.5

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH
Q ss_conf             45767117999999999999999838887621410078646898887999974185643012102363697899999864
Q gi|254780410|r   50 VTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQ  129 (362)
Q Consensus        50 ~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~  129 (362)
                      .|=|..+.+=.. |-.++...+      ....++++.||+|.|...-|-   +      .+-+.++||.++...+..+++
T Consensus        32 ~~RPt~~~vrea-lFn~l~~~~------~~~~~LDLFaGSG~lglEAlS---R------GA~~v~fVE~~~~a~~~l~~N   95 (201)
T 2ift_A           32 GLRPTGDRVKET-LFNWLMPYI------HQSECLDGFAGSGSLGFEALS---R------QAKKVTFLELDKTVANQLKKN   95 (201)
T ss_dssp             ------CHHHHH-HHHHHHHHH------TTCEEEETTCTTCHHHHHHHH---T------TCSEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHH-HHHHHHHHC------CCCEEEECCCCCCHHHHHHHH---C------CCCEEEEEEECHHHHHHHHHH
T ss_conf             968784899999-999877642------998799878882898999998---8------993999997405577899999


Q ss_pred             HHHC
Q ss_conf             1110
Q gi|254780410|r  130 LASY  133 (362)
Q Consensus       130 l~~~  133 (362)
                      +...
T Consensus        96 ~~~l   99 (201)
T 2ift_A           96 LQTL   99 (201)
T ss_dssp             HHHT
T ss_pred             HHHH
T ss_conf             9983


No 197
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=51.82  E-value=11  Score=16.49  Aligned_cols=16  Identities=6%  Similarity=0.036  Sum_probs=8.3

Q ss_pred             ECCCHHHHHHHHHHHH
Q ss_conf             1279347899999999
Q gi|254780410|r  212 FENSPCRDREMQSISD  227 (362)
Q Consensus       212 ~E~~~~~~~~~~~i~~  227 (362)
                      .|+++.+-.+++.-++
T Consensus       222 ~d~n~~a~~~~~~N~~  237 (336)
T 2yx1_A          222 IDINPHAIELLKKNIK  237 (336)
T ss_dssp             EESCHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHH
T ss_conf             9799999999999999


No 198
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=51.07  E-value=11  Score=16.41  Aligned_cols=60  Identities=17%  Similarity=-0.099  Sum_probs=39.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHH-CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHH
Q ss_conf             671179999999999999998-388876214100786468988879999741856430121023636978999998641
Q gi|254780410|r   53 PEISQIFGEMLAIFLICAWEQ-HGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQL  130 (362)
Q Consensus        53 p~is~~Fg~~ia~~~~~~~~~-~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l  130 (362)
                      .+++|..        .+.|.+ ++.+..-.|+..|+|+|.-|.=+.+.          -.+.+-||.|+...+.-++..
T Consensus        50 ~~~~p~L--------~~~~~~~~~~~~~~rvL~pgCG~G~da~~LA~~----------G~~V~gvD~S~~Ai~~a~~~~  110 (252)
T 2gb4_A           50 EQGHQLL--------KKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR----------GHTVVGVEISEIGIREFFAEQ  110 (252)
T ss_dssp             TTCCHHH--------HHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT----------TCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCHHH--------HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHC----------CCEEEEECCCHHHHHHHHHHC
T ss_conf             8899899--------999998608899998999898780889999848----------984899816299999999875


No 199
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.05A {Escherichia coli K12} SCOP: c.66.1.46
Probab=50.17  E-value=11  Score=16.32  Aligned_cols=68  Identities=18%  Similarity=0.166  Sum_probs=42.3

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             64576711799999999999999983888762141007864689888799997418564301210236369789999986
Q gi|254780410|r   49 FVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        49 F~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      .-|=|..+.+= |+|-.++...+      ....++++.||+|.|...-|.   +      ..-+.++||.++...+..++
T Consensus        32 ~~~RPt~~rvr-ealFn~L~~~~------~~~~vLDLfaGsG~lgiEals---R------Ga~~v~fVE~~~~a~~~l~~   95 (202)
T 2fpo_A           32 PGLRPTTDRVR-ETLFNWLAPVI------VDAQCLDCFAGSGALGLEALS---R------YAAGATLIEMDRAVSQQLIK   95 (202)
T ss_dssp             ------CHHHH-HHHHHHHHHHH------TTCEEEETTCTTCHHHHHHHH---T------TCSEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCCHHHH-HHHHHHHHHHC------CCCEEEECCCCCCHHHHHHHC---C------CCCEEEEEEECCCHHHHHHH
T ss_conf             99687838999-99999866432------898699888785588999870---7------99886899970333567887


Q ss_pred             HHHH
Q ss_conf             4111
Q gi|254780410|r  129 QLAS  132 (362)
Q Consensus       129 ~l~~  132 (362)
                      ++..
T Consensus        96 N~~~   99 (202)
T 2fpo_A           96 NLAT   99 (202)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             8987


No 200
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=49.41  E-value=12  Score=16.24  Aligned_cols=74  Identities=12%  Similarity=0.294  Sum_probs=41.8

Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCCCHH--HHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC-CCHHC
Q ss_conf             99999999998388876214100786468--9888799997418564301210236369789999986411102-31011
Q gi|254780410|r   63 LAIFLICAWEQHGFPSCVRLVELGPGRGI--MMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG-DKINW  139 (362)
Q Consensus        63 ia~~~~~~~~~~~~p~~~~ivE~GaG~G~--La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~-~~v~w  139 (362)
                      +.+.+.+.+.-......-.++++|.|.|-  +...|+      .|+    .++++||++..-....++...+++ ..|..
T Consensus        50 ~~~Hi~DSl~~~~~~~~~~ilDiGsGaG~PGi~laI~------~p~----~~~~Lve~~~Kk~~fL~~~~~~L~L~nv~v  119 (207)
T 1jsx_A           50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIV------RPE----AHFTLLDSLGKRVRFLRQVQHELKLENIEP  119 (207)
T ss_dssp             HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHH------CTT----SEEEEEESCHHHHHHHHHHHHHTTCSSEEE
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH------CCC----CEEEEEECHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             9999999998876423887986169986154789874------885----089997065889999999999739987304


Q ss_pred             C-CCHHHC
Q ss_conf             0-434444
Q gi|254780410|r  140 Y-TSLADV  146 (362)
Q Consensus       140 ~-~~l~~~  146 (362)
                      + ...++.
T Consensus       120 ~~~R~e~~  127 (207)
T 1jsx_A          120 VQSRVEEF  127 (207)
T ss_dssp             EECCTTTS
T ss_pred             EEEHHHHC
T ss_conf             52134531


No 201
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=48.71  E-value=7.9  Score=17.39  Aligned_cols=31  Identities=16%  Similarity=0.140  Sum_probs=27.8

Q ss_pred             CHHHHHHHHHHCCCEEECCEEHHHHHHHCCH
Q ss_conf             8899999999689836332338999997897
Q gi|254780410|r  277 DFQRLSSIAILYKLYINGLTTQGKFLEGLGI  307 (362)
Q Consensus       277 nFs~L~~~a~~~g~~~~g~~sQ~~FL~~~GI  307 (362)
                      .-.++.+..++.|++.+|+++...||.+.|+
T Consensus       141 ~s~~lsk~LKkrGFkfvGpt~~ysfmqA~G~  171 (183)
T 2ofk_A          141 ASDALAKALKKRGFKFVGTTICYSFMQACGL  171 (183)
T ss_dssp             HHHHHHHHHHHTTCCSCCHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHCCCEEECHHHHHHHHHHCCC
T ss_conf             9999999999677843166999999998699


No 202
>1kyz_A COMT, caffeic acid 3-O-methyltransferase; lignin, ferulic acid, methylation; HET: SAH FER; 2.20A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1kyw_A*
Probab=43.22  E-value=14  Score=15.61  Aligned_cols=60  Identities=17%  Similarity=0.251  Sum_probs=35.1

Q ss_pred             CCCCCHHHHHHHHHH---HHH-HHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf             767117999999999---999-9998388-8762141007864689888799997418564301210236369
Q gi|254780410|r   52 APEISQIFGEMLAIF---LIC-AWEQHGF-PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS  119 (362)
Q Consensus        52 sp~is~~Fg~~ia~~---~~~-~~~~~~~-p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s  119 (362)
                      .|+....|....+.+   ... ++..... +..-.||++|.|+|.++..+++.    .|+    ++..+++..
T Consensus       169 ~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~P~----l~~~~~Dlp  233 (365)
T 1kyz_A          169 DPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSK----YPT----IKGINFDLP  233 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSCSEEEEETCTTSHHHHHHHHH----CTT----SEEEEEECT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH----CCC----CEEEECCCH
T ss_conf             99999999988777666589999975774348717998258973898889987----998----069974481


No 203
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=43.12  E-value=14  Score=15.66  Aligned_cols=13  Identities=23%  Similarity=0.445  Sum_probs=6.6

Q ss_pred             HCCCCCHHHHHHH
Q ss_conf             1898049999998
Q gi|254780410|r   15 KNGQMTVDQYFAL   27 (362)
Q Consensus        15 ~~G~i~f~~fM~~   27 (362)
                      .+|.|+..++.+.
T Consensus        14 ~dG~I~~~EL~~~   26 (167)
T 1gjy_A           14 QDGQIDADELQRC   26 (167)
T ss_dssp             TTSCBCHHHHHHH
T ss_pred             CCCCCCHHHHHHH
T ss_conf             8997869999999


No 204
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca YX}
Probab=38.85  E-value=17  Score=15.17  Aligned_cols=46  Identities=17%  Similarity=0.307  Sum_probs=34.1

Q ss_pred             EEEEECCCCHHH--HHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHC
Q ss_conf             141007864689--88879999741856430121023636978999998641110
Q gi|254780410|r   81 RLVELGPGRGIM--MLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASY  133 (362)
Q Consensus        81 ~ivE~GaG~G~L--a~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~  133 (362)
                      +++++|.|-|+.  ...++   ....|+    .+++-|+.||.....-+.++...
T Consensus        80 qfLDlGcG~gt~~~~he~a---~~~~P~----arVv~vD~dp~~la~ara~l~~~  127 (274)
T 2qe6_A           80 QFLDLGSGLPTVQNTHEVA---QSVNPD----ARVVYVDIDPMVLTHGRALLAKD  127 (274)
T ss_dssp             EEEEETCCSCCSSCHHHHH---HHHCTT----CEEEEEESSHHHHHHHHHHHTTC
T ss_pred             EEEEECCCCCCCCHHHHHH---HHHCCC----CEEEEEECCHHHHHHHHHHHCCC
T ss_conf             8999473889864199999---987899----77999959788999987650479


No 205
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=36.76  E-value=18  Score=14.95  Aligned_cols=12  Identities=8%  Similarity=0.415  Sum_probs=6.3

Q ss_pred             HCCCCCHHHHHH
Q ss_conf             189804999999
Q gi|254780410|r   15 KNGQMTVDQYFA   26 (362)
Q Consensus        15 ~~G~i~f~~fM~   26 (362)
                      ++|.|+..++.+
T Consensus        12 ~dg~I~~~EL~~   23 (165)
T 1k94_A           12 QDGEVDAEELQR   23 (165)
T ss_dssp             GGTSBCHHHHHH
T ss_pred             CCCCCCHHHHHH
T ss_conf             899798999999


No 206
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=36.43  E-value=18  Score=14.92  Aligned_cols=52  Identities=13%  Similarity=0.333  Sum_probs=33.6

Q ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCH
Q ss_conf             99999999838887621410078646898887999974185643012102363697
Q gi|254780410|r   65 IFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSE  120 (362)
Q Consensus        65 ~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~  120 (362)
                      .++...+...+.-+..+||=+|||.|+=.    ..|.+..|+.....+.+++++.+
T Consensus        47 i~FLs~~~~~~~~~~~~VVYiGsApG~Hi----~~L~~~f~~l~~~ikw~LiDP~~   98 (307)
T 3mag_A           47 LFFLSKLQRHGILDGATVVYIGSAPGTHI----RYLRDHFYNLGVIIKWMLIDGRH   98 (307)
T ss_dssp             HHHHHHHHHTTCSTTCEEEEESCCSCHHH----HHHHHHHHHTTCCCEEEEEESSC
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCCHH----HHHHHHHHHHCCCEEEEEECCCC
T ss_conf             99999875347777767999465898547----99999728748760699988987


No 207
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus WR} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=35.19  E-value=19  Score=14.78  Aligned_cols=52  Identities=13%  Similarity=0.333  Sum_probs=33.5

Q ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCH
Q ss_conf             99999999838887621410078646898887999974185643012102363697
Q gi|254780410|r   65 IFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSE  120 (362)
Q Consensus        65 ~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~  120 (362)
                      .++...+...+.-...+||=+|||.|+=.    ..|.+..|+....++.+++++.+
T Consensus        62 I~FLs~~~~~~~~~~~~VVYiGSAPG~HI----~fL~~lf~~l~~~ikWvLiDP~~  113 (348)
T 1vpt_A           62 LFFLSKLQRHGILDGATVVYIGSAPGTHI----RYLRDHFYNLGVIIKWMLIDGRH  113 (348)
T ss_dssp             HHHHHHHHHTTCSTTCEEEEESCSSCHHH----HHHHHHHHHTTCCCEEEEEESSC
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCCHH----HHHHHHHHHHCCCEEEEEECCCC
T ss_conf             99999875436778758999475897467----99999748618762899988987


No 208
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus}
Probab=34.13  E-value=17  Score=15.11  Aligned_cols=29  Identities=31%  Similarity=0.314  Sum_probs=26.4

Q ss_pred             HHHHHHHHHCCCEEECCEEHHHHHHHCCH
Q ss_conf             99999999689836332338999997897
Q gi|254780410|r  279 QRLSSIAILYKLYINGLTTQGKFLEGLGI  307 (362)
Q Consensus       279 s~L~~~a~~~g~~~~g~~sQ~~FL~~~GI  307 (362)
                      .++.+..++.|++.+|+++=..||.+.|+
T Consensus       143 ~~isk~LKk~GFkfvGpt~~ysfmqA~G~  171 (186)
T 2jg6_A          143 TQLSKDLKQYGFKFLGPVTVFSFLEAAGL  171 (186)
T ss_dssp             HHHHHHHHTTTCCSCCHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHCCCEECCCHHHHHHHHHCCC
T ss_conf             99999998678744385799999997699


No 209
>3cvo_A Methyltransferase-like protein of unknown function; YP_167254.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=29.14  E-value=24  Score=14.12  Aligned_cols=42  Identities=21%  Similarity=0.279  Sum_probs=27.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf             21410078646898887999974185643012102363697899999864111
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS  132 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~  132 (362)
                      -.++|+|+|.-|+...      + .+    .-+++.||.++...+.-++.+..
T Consensus        32 ~~iLE~GSGgST~~~a------~-~~----~~~I~SVE~d~~W~~~v~~~l~~   73 (202)
T 3cvo_A           32 EVILEYGSGGSTVVAA------E-LP----GKHVTSVESDRAWARMMKAWLAA   73 (202)
T ss_dssp             SEEEEESCSHHHHHHH------T-ST----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHH------H-CC----CCEEEEECCCHHHHHHHHHHHHH
T ss_conf             9999968989899999------8-17----98089967999999999998654


No 210
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=29.04  E-value=20  Score=14.60  Aligned_cols=11  Identities=27%  Similarity=0.486  Sum_probs=5.3

Q ss_pred             EECCEEHHHHH
Q ss_conf             63323389999
Q gi|254780410|r  292 INGLTTQGKFL  302 (362)
Q Consensus       292 ~~g~~sQ~~FL  302 (362)
                      .+|++|--+||
T Consensus         6 SDGpvt~qEyl   16 (63)
T 2w6a_A            6 SDGAVTLQEYL   16 (63)
T ss_dssp             -CCSSCHHHHH
T ss_pred             CCCCCCHHHHH
T ss_conf             99961199999


No 211
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant protein; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=28.55  E-value=24  Score=14.06  Aligned_cols=31  Identities=26%  Similarity=0.367  Sum_probs=22.8

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
Q ss_conf             214100786468988879999741856430121023636
Q gi|254780410|r   80 VRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVET  118 (362)
Q Consensus        80 ~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~  118 (362)
                      -.+|++|+|.|.++..+++.    .|+    ++..+.+.
T Consensus       195 ~~vvDvGGG~G~~~~~l~~~----~P~----l~~~v~Dl  225 (358)
T 1zg3_A          195 ESLVDVGGGTGGVTKLIHEI----FPH----LKCTVFDQ  225 (358)
T ss_dssp             SEEEEETCTTSHHHHHHHHH----CTT----SEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHH----CCC----CCEEEECC
T ss_conf             56998089853999999986----899----76278417


No 212
>1fp2_A Isoflavone O-methytransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=27.55  E-value=25  Score=13.94  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=23.9

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
Q ss_conf             76214100786468988879999741856430121023636
Q gi|254780410|r   78 SCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVET  118 (362)
Q Consensus        78 ~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~  118 (362)
                      ..-.++++|.|.|.++..+++.    .|+    ++.++.+.
T Consensus       188 ~~~~vlDvGGG~G~~~~~l~~~----~P~----l~~~v~Dl  220 (352)
T 1fp2_A          188 GLESIVDVGGGTGTTAKIICET----FPK----LKCIVFDR  220 (352)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHH----CTT----CEEEEEEC
T ss_pred             CCEEEEEECCCCCHHHHHHHHH----CCC----CEEEEEEC
T ss_conf             8718986058861889999975----899----75999417


No 213
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=26.90  E-value=20  Score=14.58  Aligned_cols=28  Identities=18%  Similarity=0.171  Sum_probs=15.0

Q ss_pred             CCCEEECCCCCHHHH---HHHHHHHHHHHHH
Q ss_conf             888645767117999---9999999999998
Q gi|254780410|r   46 VGDFVTAPEISQIFG---EMLAIFLICAWEQ   73 (362)
Q Consensus        46 ~GDF~Tsp~is~~Fg---~~ia~~~~~~~~~   73 (362)
                      .|+|+||.+||.-.+   .-|-+|+..+|++
T Consensus        26 ~~~~iTAi~Is~kL~i~K~~INrQLYkL~~e   56 (75)
T 1sfu_A           26 TNDYTTAISLSNRLKINKKKINQQLYKLQKE   56 (75)
T ss_dssp             TTCEECHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf             5442219999988630087888999999868


No 214
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=25.76  E-value=27  Score=13.73  Aligned_cols=59  Identities=19%  Similarity=0.159  Sum_probs=32.4

Q ss_pred             CCCCCHHHHHHHHHH---HHH-HHHHCCC-CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
Q ss_conf             767117999999999---999-9998388-876214100786468988879999741856430121023636
Q gi|254780410|r   52 APEISQIFGEMLAIF---LIC-AWEQHGF-PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVET  118 (362)
Q Consensus        52 sp~is~~Fg~~ia~~---~~~-~~~~~~~-p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~  118 (362)
                      .|+....|...++.+   ... +...... +..-.++++|.|.|.++..+++.    .|+    ++.++.+.
T Consensus       178 ~~~~~~~f~~~M~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~P~----l~~~~~Dl  241 (372)
T 1fp1_D          178 DKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISK----YPL----IKGINFDL  241 (372)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHH----CTT----CEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH----CCC----CEEEEEEC
T ss_conf             99999999998888787799999986564347867998079841899999997----899----74999716


No 215
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=25.39  E-value=28  Score=13.68  Aligned_cols=79  Identities=19%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             CCCCCHH-HHHHHH--HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHH
Q ss_conf             7671179-999999--9999999983888762141007864689888799997418564301210236369789999986
Q gi|254780410|r   52 APEISQI-FGEMLA--IFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKK  128 (362)
Q Consensus        52 sp~is~~-Fg~~ia--~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~  128 (362)
                      ||.|..= +-++.|  .-+.+++++.....+.+||-+|||.=+|...++..-..........+.|+=|+-.. +.++-.+
T Consensus        78 ~PlInrGy~~R~~ai~~~v~~fl~~~~~~~~~qiv~LGaG~Dt~~frl~~~~~~~~~~~~~~~~~~evD~~~-~~~~K~~  156 (695)
T 2zwa_A           78 SPCINRGYWLRLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSD-LLKIKIE  156 (695)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHH-HHHHHHH
T ss_pred             CCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCHH-HHHHHHH
T ss_conf             852110354999999999999998587788868999384756077785255776444457887799895499-9999999


Q ss_pred             HHH
Q ss_conf             411
Q gi|254780410|r  129 QLA  131 (362)
Q Consensus       129 ~l~  131 (362)
                      .+.
T Consensus       157 ~i~  159 (695)
T 2zwa_A          157 LIK  159 (695)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             997


No 216
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. oryzae KACC10331; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A
Probab=25.24  E-value=26  Score=13.86  Aligned_cols=27  Identities=11%  Similarity=-0.038  Sum_probs=20.4

Q ss_pred             CCCCCCCHHHHHHHHHHCCCEE---ECCEE
Q ss_conf             4531268899999999689836---33233
Q gi|254780410|r  271 DLSSHVDFQRLSSIAILYKLYI---NGLTT  297 (362)
Q Consensus       271 DITahVnFs~L~~~a~~~g~~~---~g~~s  297 (362)
                      -++.-|+|....+...+.|...   +|+.+
T Consensus       252 ql~~pV~f~~~i~~l~~~g~~~fvEiGP~~  281 (314)
T 3k89_A          252 QLYLPVQWTGCVQALASQGITRIAECGPGK  281 (314)
T ss_dssp             HHHSCEEHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             HCCCCCCHHHHHHHHHHCCCCEEEECCCCH
T ss_conf             656754699999999977999999919818


No 217
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=23.22  E-value=30  Score=13.41  Aligned_cols=54  Identities=17%  Similarity=0.138  Sum_probs=20.2

Q ss_pred             CCCCCCCCCCCCCCCEEE-CC--CCC-HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
Q ss_conf             786468988888888645-76--711-7999999999999999838887621410078646
Q gi|254780410|r   34 FGYYSTCNPFGAVGDFVT-AP--EIS-QIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRG   90 (362)
Q Consensus        34 ~GYY~~~~~~G~~GDF~T-sp--~is-~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G   90 (362)
                      .|||..+.+|-  +-.+| .+  .+. .+|-+-|...+..-.........+.++- |-|+|
T Consensus        51 ~G~~n~~s~i~--~R~ls~~~~~~~~~~~~~~ri~~A~~~R~~~~~~t~~yRl~~-ge~D~  108 (396)
T 2as0_A           51 KGFANPNSNIM--VRIVTKDKDVEINKDLFKRRIKKANEYRKKVLKYTNVYRMVY-GEADY  108 (396)
T ss_dssp             EEEECTTSSEE--EEEEESCTTCCCSHHHHHHHHHHHHHHHHHTSCCCSEEEEEE-GGGGT
T ss_pred             EEEECCCCCEE--EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-CCCCC
T ss_conf             99988999879--999888988775899999999999999997535798268880-35788


No 218
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=22.77  E-value=31  Score=13.35  Aligned_cols=38  Identities=13%  Similarity=-0.010  Sum_probs=20.3

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCH
Q ss_conf             621410078646898887999974185643012102363697
Q gi|254780410|r   79 CVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSE  120 (362)
Q Consensus        79 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~  120 (362)
                      +-.|+|+|-..|.=+.=+...++...+    ..+++-+++.+
T Consensus        82 Pk~ILEIG~~~GgS~~~~a~~l~~~~~----~~~I~~iDId~  119 (236)
T 2bm8_A           82 PRTIVELGVYNGGSLAWFRDLTKIMGI----DCQVIGIDRDL  119 (236)
T ss_dssp             CSEEEEECCTTSHHHHHHHHHHHHTTC----CCEEEEEESCC
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHCCC----CCEEEEECCCH
T ss_conf             798999738808259999999974578----84599733665


No 219
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophilic attack; 2.30A {Mycobacterium tuberculosis H37RV} PDB: 2qj3_A
Probab=22.75  E-value=28  Score=13.62  Aligned_cols=22  Identities=9%  Similarity=0.033  Sum_probs=17.8

Q ss_pred             CCCCCCCHHHHHHHHHHCCCEE
Q ss_conf             4531268899999999689836
Q gi|254780410|r  271 DLSSHVDFQRLSSIAILYKLYI  292 (362)
Q Consensus       271 DITahVnFs~L~~~a~~~g~~~  292 (362)
                      -++.-|+|....+.+.+.|.+.
T Consensus       244 ~l~~pV~f~~~i~~l~~~g~~~  265 (303)
T 2qc3_A          244 QLTQPVRWDLCTATLREHTVTA  265 (303)
T ss_dssp             GGGSCEEHHHHHHHHHHTTEEE
T ss_pred             HCCCCCCHHHHHHHHHHCCCCE
T ss_conf             7338715999999999779999


No 220
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus HB8} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=22.59  E-value=31  Score=13.33  Aligned_cols=19  Identities=5%  Similarity=-0.118  Sum_probs=9.4

Q ss_pred             HHHHHHHHHHHCCCCCHHH
Q ss_conf             9999999998189804999
Q gi|254780410|r    5 LIRKIVNLIKKNGQMTVDQ   23 (362)
Q Consensus         5 L~~~i~~~I~~~G~i~f~~   23 (362)
                      |..+-.+++..+-|.-|+.
T Consensus         5 ~~~~~~~~~~~ghPWvy~~   23 (382)
T 1wxx_A            5 VNAKGAARLLSRHLWVFRR   23 (382)
T ss_dssp             ECHHHHHHHHTTCCEECGG
T ss_pred             ECCCHHHHHHCCCCEEECC
T ss_conf             9821677875899986487


No 221
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=21.52  E-value=33  Score=13.18  Aligned_cols=13  Identities=23%  Similarity=0.529  Sum_probs=9.0

Q ss_pred             CCHHHHHHHHHHH
Q ss_conf             9848999999999
Q gi|254780410|r    1 MENKLIRKIVNLI   13 (362)
Q Consensus         1 ~~~~L~~~i~~~I   13 (362)
                      |+|+|.+-|...+
T Consensus         1 m~t~lE~ai~~l~   13 (92)
T 2kax_A            1 METPLEKALTTMV   13 (92)
T ss_dssp             CCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
T ss_conf             9988999999999


No 222
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.46  E-value=33  Score=13.18  Aligned_cols=18  Identities=22%  Similarity=0.338  Sum_probs=15.6

Q ss_pred             EEEEEEECCCCEEEEEEE
Q ss_conf             358999156646899899
Q gi|254780410|r  164 IKQFVMTEHGIRERMIDI  181 (362)
Q Consensus       164 v~~~~~~~~~w~E~~V~~  181 (362)
                      ++.|++.++.|.|++|+.
T Consensus        20 aKLy~~~~~~WkERG~G~   37 (125)
T 2ec1_A           20 CKLFYKKDNEFKEKGIGT   37 (125)
T ss_dssp             EEEEEECSSSEEEEEEEE
T ss_pred             EEEEEECCCCEEECCEEE
T ss_conf             799998699826532889


No 223
>2kvs_A Uncharacterized protein MW0776; PSI-2, NESG, BIG target, structural genomics, protein structure initiative; NMR {Staphylococcus aureus}
Probab=21.26  E-value=22  Score=14.34  Aligned_cols=13  Identities=15%  Similarity=0.148  Sum_probs=10.3

Q ss_pred             HCCCCCHHHHHHH
Q ss_conf             1898049999998
Q gi|254780410|r   15 KNGQMTVDQYFAL   27 (362)
Q Consensus        15 ~~G~i~f~~fM~~   27 (362)
                      ++.|+||.+||+-
T Consensus         2 ~~~~MSFYdFiq~   14 (80)
T 2kvs_A            2 AGDPMTFYNFIMG   14 (80)
T ss_dssp             CCCCCHHHHHHTT
T ss_pred             CCCCCCHHHHHHH
T ss_conf             9885409999985


Done!