RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780411|ref|YP_003064824.1| prolipoprotein diacylglyceryl
transferase [Candidatus Liberibacter asiaticus str. psy62]
         (288 letters)



>3kuu_A Phosphoribosylaminoimidazole carboxylase catalytic subunit
           PURE; 3-layer (ABA) sandwich, rossmann fold, csgid,
           lyase, structural genomics; 1.41A {Yersinia pestis} PDB:
           1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* (A:)
          Length = 174

 Score = 26.3 bits (58), Expect = 5.1
 Identities = 11/50 (22%), Positives = 14/50 (28%), Gaps = 8/50 (16%)

Query: 7   LWSILTYPNLNPVALSLGPIAIRWYGLAYLVGMLFGIWYIQYLLGKPALW 56
           L+SI+  P   PV       A      A L   +         L    L 
Sbjct: 109 LYSIVQXPRGIPVGTLAIGKA-GAANAALLAAQILA-------LHDTELA 150


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.330    0.146    0.491 

Gapped
Lambda     K      H
   0.267   0.0647    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 2,374,860
Number of extensions: 108640
Number of successful extensions: 378
Number of sequences better than 10.0: 1
Number of HSP's gapped: 377
Number of HSP's successfully gapped: 25
Length of query: 288
Length of database: 4,956,049
Length adjustment: 88
Effective length of query: 200
Effective length of database: 1,981,209
Effective search space: 396241800
Effective search space used: 396241800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 54 (24.8 bits)