HHsearch alignment for GI: 254780413 and conserved domain: PRK09303
>PRK09303 adaptive-response sensory kinase; Validated.
Probab=100.00 E-value=0 Score=488.60 Aligned_cols=240 Identities=25% Similarity=0.444 Sum_probs=218.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHH
Q ss_conf 6544668878999999999985234531748999999999973126877888999999----999998999999999999
Q gi|254780413|r 570 KLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYA----NYIDRSGNLVLDIVNDLL 645 (820)
Q Consensus 570 el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l----~~i~~~~~~l~~li~dlL 645 (820)
T Consensus 134 ~Lrqe~E~L~e~~r~K~~Fla~vSHELRTPLTaI~g~~e~L~~~~~~~~-~~~~~~~l~~l~~~~~~~~~~L~~LI~DLL 212 (378)
T PRK09303 134 VLRQENETLLEQLKFKDRLLAMLAHDLRTPLTAASLAVETLELGQIDPS-EELSPALIEQLQDQARRQLEEIERLITDLL 212 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999899999999999999997367615319999999999864257974-166799999999999999999999999999
Q ss_pred HHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 98664318852000331799999999999999987378089997379884689888999999999998888718897879
Q gi|254780413|r 646 DISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHFTPSGGQI 725 (820)
Q Consensus 646 d~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v 725 (820)
T Consensus 213 d~sr~e~g~l~l~~~~~dL~~lv~evi~~~~~~a~~k~i~l~~dip~dlp~V~aD~~rL~QVl~NLL~NAiKyT~~gG~I 292 (378)
T PRK09303 213 EVGRTRWEALQFNPQKLDLGSLCQEVILELEKRWLAKSLEIQTDIPSDLPSVYADQRRIRQVLLNLLDNAIKYTPEGGTI 292 (378)
T ss_pred HHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 99887538863146887699999999999898998389789997689997287689999999999999999858999869
Q ss_pred EEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEE
Q ss_conf 99999804994999999788978988866423771873478766678886068999999996198699997889953999
Q gi|254780413|r 726 IISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIE 805 (820)
Q Consensus 726 ~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~ 805 (820)
T Consensus 293 ~I~~~~~~~~~V~isV~DtG~GIp~e~~~rIFe~F~R~~~s--~~~~GtGLGLaIvk~IVe~HgG~I~V~S~~g~GS~Ft 370 (378)
T PRK09303 293 TLTMLHRTTQKVQVSICDTGPGIPEEEQERIFEDRVRLPRD--EGTEGYGIGLSVCRRIVEVHYGQIWVDSEPGQGSCFH 370 (378)
T ss_pred EEEEEEECCCEEEEEEEEECCCCCHHHHHHHCCCCEECCCC--CCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCEEEE
T ss_conf 99999813998999999807888989998756363445689--9988312799999999998799799994399835999
Q ss_pred EEECCCC
Q ss_conf 9963577
Q gi|254780413|r 806 IIFPLYD 812 (820)
Q Consensus 806 v~lP~~~ 812 (820)
T Consensus 371 ~tLPv~r 377 (378)
T PRK09303 371 FTLPVYR 377 (378)
T ss_pred EEEECCC
T ss_conf 9982478