HHsearch alignment for GI: 254780413 and conserved domain: PRK09776

>PRK09776 putative sensor protein; Provisional.
Probab=100.00  E-value=3.1e-34  Score=268.66  Aligned_cols=363  Identities=13%  Similarity=0.076  Sum_probs=269.2

Q ss_pred             CEEEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCC--CCCCCEEEEECCCCCCCEE
Q ss_conf             81059999799909996678996628997897499688820401688238999998637--9616716886147988379
Q gi|254780413|r   82 TVRFTWNIDAHGYLKEISEELPKTIGNYAFKMIGMRLCDVSDILHIDPNNHIGDLLKRQ--NTWYGKTTLWPIEGTNLYV  159 (820)
Q Consensus        82 ~~rfvw~~D~eGr~~~vn~~~~~~~G~~~~e~iGr~~~e~~~~~~~~p~~~i~~~l~~~--~~~~~~~~~~~~~g~~~~~  159 (820)
T Consensus       314 aiG-mAlV~~dGr~l~VN~alc~mlGYs~~ELl~ltf~diThPdDl~~dl~~~~~LlaGei~~y~lEKRyirkDG~~--v  390 (1116)
T PRK09776        314 AIG-MALVGTEGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLLSGEINSYSMEKRYYNRDGDV--V  390 (1116)
T ss_pred             CCC-EEEECCCCCEEEECHHHHHHHCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE--E
T ss_conf             664-6998689818981699998849899998529898816962177789999999769966454112467369979--9


Q ss_pred             EEEEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
Q ss_conf             99986300156887363055668985221037799999863243344543014320023344210144455310011000
Q gi|254780413|r  160 PIDLAALPIYSRNREFSGFRGFGIVHVNRVDNDPRALGKRLDKKFSHLHEIKKGHSSVEKEKYDIFSQQSPPPHLRMKNK  239 (820)
Q Consensus       160 ~v~ls~~Pv~d~~g~~~G~rG~gv~r~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (820)
T Consensus       391 W~~ltvSlvRd~~G~p~~f--I~~v~DIterK~aE~~lr~l~e-------------------------------------  431 (1116)
T PRK09776        391 WALLAVSLVRDTDGTPLYF--IAQIEDINELKRTEQVNERLME-------------------------------------  431 (1116)
T ss_pred             EEEEEEEEEECCCCCEEEE--EEEEEECHHHHHHHHHHHHHHH-------------------------------------
T ss_conf             9998999997699984489--9999733377999999999999-------------------------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             13344101361012222000210152011100000002440233355542101101222332100011013456545556
Q gi|254780413|r  240 VSSLTEYYAHKDDVLKTEKYPLLTSEESSLPEQEDFHTINLNQYTKKQYFGTLQNNSKESFEYLSHRNHPSLSAYFDEGE  319 (820)
Q Consensus       240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (820)
                                                                                                      
T Consensus       432 --------------------------------------------------------------------------------  431 (1116)
T PRK09776        432 --------------------------------------------------------------------------------  431 (1116)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHCCCCEEEEEC-CEEEEECHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             5789999634997899709-958872068898837984477224676112202455451356789998750586655999
Q gi|254780413|r  320 NLTPETVDKCPIPFFVYSH-GNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIKPVMLYRSDRTCIAASA  398 (820)
Q Consensus       320 ~~~~~ild~lp~gv~i~~~-gri~~~N~a~~~l~G~~~~e~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  398 (820)
T Consensus       432 -rl~la~ea~~iGiwe~d~~~~~i~~~~r~~~l~g~~~~--~~~--~~~~w-~~~ihPdD~~~v~~~~~~~l~~~~~~d~  505 (1116)
T PRK09776        432 -RITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPH--IKP--NWQVW-YACLHPEDRQRVEKEIRDALQGRSPFKL  505 (1116)
T ss_pred             -HHHHHHHHCCCCEEEEECCCCCEECCHHHHHHHCCCCC--CCC--CHHHH-HHHCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             -99999862476635520566502113789998488822--266--88999-8723915689999999999715887560


Q ss_pred             EEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEH
Q ss_conf             99999738944999999632433320023334456788889999999999999999999974220430785998387215
Q gi|254780413|r  399 RLHTIQWNRENSLAMTFIPFEKANQFPENMPQNGIEPEDVDTRINKRKMEIEVMQLCSILEATSDGIAIINREGIILSTN  478 (820)
Q Consensus       399 ~~~~i~~~g~~~~~l~~~~~~~~d~~~~~~~~~~~~~dit~~~~~~~~L~~~~~~L~~ile~~~~gI~~~D~~G~i~~~N  478 (820)
T Consensus       506 E~Rl~~~dG~~r~i-~~~a~~~~d~~G~~~r~~G~~~DITe~K~~eeaL~e~~erl~~~l~si~d~vi~tD~~~ri~~~N  584 (1116)
T PRK09776        506 EFRIVVPDGEIRHI-RALANRVLNKDGEVERLLGINMDMTEVRQLNEALFEEKERLHITLDSIGEAVVCTDAAMKVTFMN  584 (1116)
T ss_pred             EEEEECCCCCEEEE-EEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEC
T ss_conf             46788479978999-86214898689988988731323207789999999999999999834022489973788678886


Q ss_pred             HHHHHHHCCCHHHCCCCCCCCCCC---CCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCC---
Q ss_conf             689988489603207864433456---45627789999988606984022348887638972899999988717887---
Q gi|254780413|r  479 RAVSKLFGYPVEDILRKPFTVFLE---QNTPSVMNHYLTEILSLDLRQTLEKITLGSTKEEKLLSLRIIIKKLPFSS---  552 (820)
Q Consensus       479 ~a~~~l~G~~~~el~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  552 (820)
T Consensus       585 paae~~tG~~~~e~~G~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~G~~~~v~~s~~pi~~~~g~~  664 (1116)
T PRK09776        585 PVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENPVEICLADTSRSYLEQDVVLHSRSGGSYDVQYSIAPLSTLDGEN  664 (1116)
T ss_pred             HHHHHHHCCCHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCE
T ss_conf             99999829887998499878970036644211112199999740787331235368826996899997304513477855


Q ss_pred             -EEEEEEEEHHHHHHHHHHHHH
Q ss_conf             -399998651444434576544
Q gi|254780413|r  553 -CYSLTMHDISEWKQEKNKLSH  573 (820)
Q Consensus       553 -~~~~v~~Dite~k~~e~el~~  573 (820)
T Consensus       665 ~g~V~v~~Dit~~k~~~~~l~~  686 (1116)
T PRK09776        665 IGSVLVFQDVTESRAMLRQLSY  686 (1116)
T ss_pred             EEEEEEECCHHHHHHHHHHHHH
T ss_conf             4479852012299999999987