HHsearch alignment for GI: 254780413 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=3.1e-34 Score=268.66 Aligned_cols=363 Identities=13% Similarity=0.076 Sum_probs=269.2
Q ss_pred CEEEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCC--CCCCCEEEEECCCCCCCEE
Q ss_conf 81059999799909996678996628997897499688820401688238999998637--9616716886147988379
Q gi|254780413|r 82 TVRFTWNIDAHGYLKEISEELPKTIGNYAFKMIGMRLCDVSDILHIDPNNHIGDLLKRQ--NTWYGKTTLWPIEGTNLYV 159 (820)
Q Consensus 82 ~~rfvw~~D~eGr~~~vn~~~~~~~G~~~~e~iGr~~~e~~~~~~~~p~~~i~~~l~~~--~~~~~~~~~~~~~g~~~~~ 159 (820)
T Consensus 314 aiG-mAlV~~dGr~l~VN~alc~mlGYs~~ELl~ltf~diThPdDl~~dl~~~~~LlaGei~~y~lEKRyirkDG~~--v 390 (1116)
T PRK09776 314 AIG-MALVGTEGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLLSGEINSYSMEKRYYNRDGDV--V 390 (1116)
T ss_pred CCC-EEEECCCCCEEEECHHHHHHHCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE--E
T ss_conf 664-6998689818981699998849899998529898816962177789999999769966454112467369979--9
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
Q ss_conf 99986300156887363055668985221037799999863243344543014320023344210144455310011000
Q gi|254780413|r 160 PIDLAALPIYSRNREFSGFRGFGIVHVNRVDNDPRALGKRLDKKFSHLHEIKKGHSSVEKEKYDIFSQQSPPPHLRMKNK 239 (820)
Q Consensus 160 ~v~ls~~Pv~d~~g~~~G~rG~gv~r~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (820)
T Consensus 391 W~~ltvSlvRd~~G~p~~f--I~~v~DIterK~aE~~lr~l~e------------------------------------- 431 (1116)
T PRK09776 391 WALLAVSLVRDTDGTPLYF--IAQIEDINELKRTEQVNERLME------------------------------------- 431 (1116)
T ss_pred EEEEEEEEEECCCCCEEEE--EEEEEECHHHHHHHHHHHHHHH-------------------------------------
T ss_conf 9998999997699984489--9999733377999999999999-------------------------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 13344101361012222000210152011100000002440233355542101101222332100011013456545556
Q gi|254780413|r 240 VSSLTEYYAHKDDVLKTEKYPLLTSEESSLPEQEDFHTINLNQYTKKQYFGTLQNNSKESFEYLSHRNHPSLSAYFDEGE 319 (820)
Q Consensus 240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (820)
T Consensus 432 -------------------------------------------------------------------------------- 431 (1116)
T PRK09776 432 -------------------------------------------------------------------------------- 431 (1116)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHCCCCEEEEEC-CEEEEECHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 5789999634997899709-958872068898837984477224676112202455451356789998750586655999
Q gi|254780413|r 320 NLTPETVDKCPIPFFVYSH-GNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIKPVMLYRSDRTCIAASA 398 (820)
Q Consensus 320 ~~~~~ild~lp~gv~i~~~-gri~~~N~a~~~l~G~~~~e~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 398 (820)
T Consensus 432 -rl~la~ea~~iGiwe~d~~~~~i~~~~r~~~l~g~~~~--~~~--~~~~w-~~~ihPdD~~~v~~~~~~~l~~~~~~d~ 505 (1116)
T PRK09776 432 -RITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPH--IKP--NWQVW-YACLHPEDRQRVEKEIRDALQGRSPFKL 505 (1116)
T ss_pred -HHHHHHHHCCCCEEEEECCCCCEECCHHHHHHHCCCCC--CCC--CHHHH-HHHCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf -99999862476635520566502113789998488822--266--88999-8723915689999999999715887560
Q ss_pred EEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEH
Q ss_conf 99999738944999999632433320023334456788889999999999999999999974220430785998387215
Q gi|254780413|r 399 RLHTIQWNRENSLAMTFIPFEKANQFPENMPQNGIEPEDVDTRINKRKMEIEVMQLCSILEATSDGIAIINREGIILSTN 478 (820)
Q Consensus 399 ~~~~i~~~g~~~~~l~~~~~~~~d~~~~~~~~~~~~~dit~~~~~~~~L~~~~~~L~~ile~~~~gI~~~D~~G~i~~~N 478 (820)
T Consensus 506 E~Rl~~~dG~~r~i-~~~a~~~~d~~G~~~r~~G~~~DITe~K~~eeaL~e~~erl~~~l~si~d~vi~tD~~~ri~~~N 584 (1116)
T PRK09776 506 EFRIVVPDGEIRHI-RALANRVLNKDGEVERLLGINMDMTEVRQLNEALFEEKERLHITLDSIGEAVVCTDAAMKVTFMN 584 (1116)
T ss_pred EEEEECCCCCEEEE-EEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEC
T ss_conf 46788479978999-86214898689988988731323207789999999999999999834022489973788678886
Q ss_pred HHHHHHHCCCHHHCCCCCCCCCCC---CCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCC---
Q ss_conf 689988489603207864433456---45627789999988606984022348887638972899999988717887---
Q gi|254780413|r 479 RAVSKLFGYPVEDILRKPFTVFLE---QNTPSVMNHYLTEILSLDLRQTLEKITLGSTKEEKLLSLRIIIKKLPFSS--- 552 (820)
Q Consensus 479 ~a~~~l~G~~~~el~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 552 (820)
T Consensus 585 paae~~tG~~~~e~~G~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~G~~~~v~~s~~pi~~~~g~~ 664 (1116)
T PRK09776 585 PVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENPVEICLADTSRSYLEQDVVLHSRSGGSYDVQYSIAPLSTLDGEN 664 (1116)
T ss_pred HHHHHHHCCCHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCE
T ss_conf 99999829887998499878970036644211112199999740787331235368826996899997304513477855
Q ss_pred -EEEEEEEEHHHHHHHHHHHHH
Q ss_conf -399998651444434576544
Q gi|254780413|r 553 -CYSLTMHDISEWKQEKNKLSH 573 (820)
Q Consensus 553 -~~~~v~~Dite~k~~e~el~~ 573 (820)
T Consensus 665 ~g~V~v~~Dit~~k~~~~~l~~ 686 (1116)
T PRK09776 665 IGSVLVFQDVTESRAMLRQLSY 686 (1116)
T ss_pred EEEEEEECCHHHHHHHHHHHHH
T ss_conf 4479852012299999999987