HHsearch alignment for GI: 254780413 and conserved domain: PRK10364
>PRK10364 sensor protein ZraS; Provisional.
Probab=100.00 E-value=0 Score=441.66 Aligned_cols=236 Identities=25% Similarity=0.424 Sum_probs=214.2
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 65144443457654466887899999999998523453174899999999997312687788899999999999899999
Q gi|254780413|r 559 HDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVL 638 (820)
Q Consensus 559 ~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~ 638 (820)
T Consensus 217 ~~~~~R~~Lq~el~r~EKLA-----aLG~LAAgVAHEIRNPLtsI~G~AqlL~~~~~---~~~e~~e~~~iI~~E~~RL~ 288 (455)
T PRK10364 217 RYLRSRQLLQDEMKRKEKLV-----ALGHLAAGVAHEIRNPLSSIKGLAKYFAERAP---AGGEAHQLAQVMAKEADRLN 288 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf 77899999999999998999-----99999999899885649999999999867699---98579999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999866431885200033179999999999999998737808999737988468988899999999999888871
Q gi|254780413|r 639 DIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHF 718 (820)
Q Consensus 639 ~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~ 718 (820)
T Consensus 289 ~iI~~LL~faRp----~~~~~~~vdL~~li~~~l~l~~~~a~~k~I~l~~~~~~~lp~I~~D~~~L~QVl~NLl~NAi~A 364 (455)
T PRK10364 289 RVVSELLELVKP----THLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQA 364 (455)
T ss_pred HHHHHHHHHHCC----CCCCCCEECHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHH
T ss_conf 999999987289----9898848849999999999998688648909999738888759888999999999999999997
Q ss_pred CCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 88978799999980499499999978897898886642377187347876667888606899999999619869999788
Q gi|254780413|r 719 TPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTP 798 (820)
Q Consensus 719 t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~p 798 (820)
T Consensus 365 ~~~gg~I~I~~~~-~~~~V~I~V~DnG~GIp~E~l~rIFePFfTTK------~~GTGLGLaIv~~IVe~HgG~I~v~S~~ 437 (455)
T PRK10364 365 IGQHGVISVTASE-SGAGVKISVTDSGKGIAADQLEAIFTPYFTTK------AEGTGLGLAVVHNIVEQHGGTIQVASQE 437 (455)
T ss_pred CCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCC------CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 5899779999998-59989999997699979789878658976489------8970288999999999889979999559
Q ss_pred CCCEEEEEEECCCCC
Q ss_conf 995399999635777
Q gi|254780413|r 799 AKGTLIEIIFPLYDT 813 (820)
Q Consensus 799 G~Gt~f~v~lP~~~~ 813 (820)
T Consensus 438 G~GT~FtI~LPl~a~ 452 (455)
T PRK10364 438 GKGATFTLWLPVNIT 452 (455)
T ss_pred CCCEEEEEEEECCCC
T ss_conf 998799999827875