HHsearch alignment for GI: 254780413 and conserved domain: PRK10364

>PRK10364 sensor protein ZraS; Provisional.
Probab=100.00  E-value=0  Score=441.66  Aligned_cols=236  Identities=25%  Similarity=0.424  Sum_probs=214.2

Q ss_pred             EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             65144443457654466887899999999998523453174899999999997312687788899999999999899999
Q gi|254780413|r  559 HDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVL  638 (820)
Q Consensus       559 ~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~  638 (820)
T Consensus       217 ~~~~~R~~Lq~el~r~EKLA-----aLG~LAAgVAHEIRNPLtsI~G~AqlL~~~~~---~~~e~~e~~~iI~~E~~RL~  288 (455)
T PRK10364        217 RYLRSRQLLQDEMKRKEKLV-----ALGHLAAGVAHEIRNPLSSIKGLAKYFAERAP---AGGEAHQLAQVMAKEADRLN  288 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf             77899999999999998999-----99999999899885649999999999867699---98579999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHC
Q ss_conf             99999999866431885200033179999999999999998737808999737988468988899999999999888871
Q gi|254780413|r  639 DIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHF  718 (820)
Q Consensus       639 ~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~  718 (820)
T Consensus       289 ~iI~~LL~faRp----~~~~~~~vdL~~li~~~l~l~~~~a~~k~I~l~~~~~~~lp~I~~D~~~L~QVl~NLl~NAi~A  364 (455)
T PRK10364        289 RVVSELLELVKP----THLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQA  364 (455)
T ss_pred             HHHHHHHHHHCC----CCCCCCEECHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHH
T ss_conf             999999987289----9898848849999999999998688648909999738888759888999999999999999997


Q ss_pred             CCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf             88978799999980499499999978897898886642377187347876667888606899999999619869999788
Q gi|254780413|r  719 TPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTP  798 (820)
Q Consensus       719 t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~p  798 (820)
T Consensus       365 ~~~gg~I~I~~~~-~~~~V~I~V~DnG~GIp~E~l~rIFePFfTTK------~~GTGLGLaIv~~IVe~HgG~I~v~S~~  437 (455)
T PRK10364        365 IGQHGVISVTASE-SGAGVKISVTDSGKGIAADQLEAIFTPYFTTK------AEGTGLGLAVVHNIVEQHGGTIQVASQE  437 (455)
T ss_pred             CCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCC------CCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             5899779999998-59989999997699979789878658976489------8970288999999999889979999559


Q ss_pred             CCCEEEEEEECCCCC
Q ss_conf             995399999635777
Q gi|254780413|r  799 AKGTLIEIIFPLYDT  813 (820)
Q Consensus       799 G~Gt~f~v~lP~~~~  813 (820)
T Consensus       438 G~GT~FtI~LPl~a~  452 (455)
T PRK10364        438 GKGATFTLWLPVNIT  452 (455)
T ss_pred             CCCEEEEEEEECCCC
T ss_conf             998799999827875