HHsearch alignment for GI: 254780413 and conserved domain: PRK10604
>PRK10604 sensor protein RstB; Provisional.
Probab=100.00 E-value=0 Score=379.44 Aligned_cols=239 Identities=19% Similarity=0.296 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44434576544668878999999999985234531748999999999973126877888999999999998999999999
Q gi|254780413|r 563 EWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVN 642 (820)
Q Consensus 563 e~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~ 642 (820)
T Consensus 190 Ei~~La~~FN~Ma~~l~~~~~~~r~f~a~vSHELRTPLt~i~~~lell~~-~---~--~~e---~~~l~~~i~~l~~lv~ 260 (433)
T PRK10604 190 SFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDN-L---S--AAE---SQALNRDIGQLEALIE 260 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCC-C---C--HHH---HHHHHHHHHHHHHHHH
T ss_conf 59999999999999999999999999874024431689999999997049-9---8--578---9999999999999999
Q ss_pred HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99998664318852000331799999999999999987378089997379884689888999999999998888718897
Q gi|254780413|r 643 DLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHFTPSG 722 (820)
Q Consensus 643 dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~t~~g 722 (820)
T Consensus 261 ~lL~larl~~~~~~l~~~~~dl~~~i~~~~~~~~~~~~~~~i~l~~~--~~~~~~~~D~~~l~~~l~NLl~NA~kys--~ 336 (433)
T PRK10604 261 ELLTYARLDRPQNELHLSEPDLPAWLSTHLADIQAVTPEKTVRLKTP--HQGDYGALDMRLMERVLDNLLNNALRYS--H 336 (433)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC--CCCCEEEECHHHHHHHHHHHHHHHHHCC--C
T ss_conf 99999763689787877023699999999999997655996799717--9886698789999999999999998718--9
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCE
Q ss_conf 87999999804994999999788978988866423771873478766678886068999999996198699997889953
Q gi|254780413|r 723 GQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGT 802 (820)
Q Consensus 723 g~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt 802 (820)
T Consensus 337 ~~v~v~~~~~-~~~~~i~V~D~G~GI~~e~~~~IFepFyR~d~sr~~~~gG~GLGLaIvk~Iv~~hgG~i~v~s~~~gGa 415 (433)
T PRK10604 337 STVETSLLLD-GDQATLIVEDDGPGIAPEERERIFEPFVRLDPSRDRATGGCGLGLAIVHSIALAMGGSVNCDTSELGGA 415 (433)
T ss_pred CCEEEEEEEE-CCEEEEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEE
T ss_conf 9789999999-999999999778788989999865794528888899999613889999999998199899996699847
Q ss_pred EEEEEECCCCCCC
Q ss_conf 9999963577788
Q gi|254780413|r 803 LIEIIFPLYDTSH 815 (820)
Q Consensus 803 ~f~v~lP~~~~~~ 815 (820)
T Consensus 416 ~f~i~LP~~~~~~ 428 (433)
T PRK10604 416 RFSFSWPVWHNIP 428 (433)
T ss_pred EEEEEECCCCCCC
T ss_conf 9999977999999