HHsearch alignment for GI: 254780413 and conserved domain: PRK11086

>PRK11086 sensory histidine kinase DcuS; Provisional.
Probab=100.00  E-value=0  Score=357.38  Aligned_cols=311  Identities=22%  Similarity=0.241  Sum_probs=224.5

Q ss_pred             HHHHHHHHHHHHCCHHEEECCCCEEEEEHHHHHHHHCCC--HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             999999999742204307859983872156899884896--032078644334564562778999998860698402234
Q gi|254780413|r  450 EVMQLCSILEATSDGIAIINREGIILSTNRAVSKLFGYP--VEDILRKPFTVFLEQNTPSVMNHYLTEILSLDLRQTLEK  527 (820)
Q Consensus       450 ~~~~L~~ile~~~~gI~~~D~~G~i~~~N~a~~~l~G~~--~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (820)
T Consensus       219 l~~er~aiL~s~~eGVIavD~~g~I~l~N~~A~~ll~~~~~~~~~~g~~~~~~~~~~~-------l~~vl~~~~~~-~d~  290 (541)
T PRK11086        219 LFEQRQAMLQSIKEGVIAVDDRGEVTLINDEAQRLFYKKGQEDDPLSTDVHSWSPVSR-------LKEVLRTGTPR-RDE  290 (541)
T ss_pred             HHHHHHHHHHHHHCEEEEECCCCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHCCCHH-------HHHHHHCCCCC-CEE
T ss_conf             9999999985300169997589879998499998743358874312551777275455-------99998448853-107


Q ss_pred             EEEEECCCCCEEEEEEEEEECCCC-CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             888763897289999998871788-7399998651444434576544668878999999999985234531748999999
Q gi|254780413|r  528 ITLGSTKEEKLLSLRIIIKKLPFS-SCYSLTMHDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPLTAIIGF  606 (820)
Q Consensus       528 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL~~I~g~  606 (820)
T Consensus       291 e~~---~~~~~l~~~~~pi~~~g~~~G~V~~~rD~TE~~~L~~~L~~v--------~~~~e~Lra~sHE~~n~L~~I~Gl  359 (541)
T PRK11086        291 EIN---INGRLLLTNTVPVRVNGEIIGAISTFRDKTEVRQLAQRLDGV--------VNYADALRAQSHEFMNKLHVILGL  359 (541)
T ss_pred             EEE---ECCEEEEEEEEEEEECCEEEEEEEEEECHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999---899899999777654890689999984427899999999999--------999999876116664057999888


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEE
Q ss_conf             99997312687788899999999999899999999999998664318852000331799999999999999987378089
Q gi|254780413|r  607 SEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILI  686 (820)
Q Consensus       607 ~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l  686 (820)
T Consensus       360 l~l~~~--------d~~~~~---i~~~~~~~~~~~~~l~~~i~----------~p~-la~~L----lgk~~~a~E~gi~L  413 (541)
T PRK11086        360 LHLKSY--------DQLEDY---ILKTANNYQEEIGSLLGKIK----------SPV-IAGFL----LGKISRARELGITL  413 (541)
T ss_pred             HHHCHH--------HHHHHH---HHHHHHHHHHHHHHHHHHCC----------CHH-HHHHH----HHHHHHHHHCCCEE
T ss_conf             864308--------999999---99999999999999998611----------688-89999----98899999669859


Q ss_pred             EEEECCCCCEEEECHH---HHHHHHHHHHHHHHHCCC--CCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCE
Q ss_conf             9973798846898889---999999999988887188--97879999998049949999997889789888664237718
Q gi|254780413|r  687 RTSFANNIPRILADLR---SVKQIALNILSNAIHFTP--SGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFG  761 (820)
Q Consensus       687 ~~~~~~~lp~v~~D~~---~l~Qvl~NLl~NAik~t~--~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~  761 (820)
T Consensus       414 ~i~~~~~l~~~~-~~~~~~~l~tVlgNLidNAi~A~~~~~~g~V~v~l~~-~~~~l~i~V~D~G~GI~~e~~~~IFerg~  491 (541)
T PRK11086        414 IISEDSQLPDSD-DEDQVHELITILGNLIENALEAVSNEEGGEISVSLHY-RHGWLHIEVSDDGPGIAPEEIEAIFDKGY  491 (541)
T ss_pred             EEECCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHCCCCC
T ss_conf             970677677888-6466657999999999999997316899679999998-89989999997798859779988717987


Q ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf             7347876667888606899999999619869999788995399999635777
Q gi|254780413|r  762 QIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDT  813 (820)
Q Consensus       762 ~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~  813 (820)
T Consensus       492 StK------~~g~GLGLaIvk~iVe~~gG~I~veS~~g~GT~Fti~LP~~~~  537 (541)
T PRK11086        492 STK------GSNRGVGLYLVKQSVENLGGSIAVESEPGIGTQFFVQIPWDGK  537 (541)
T ss_pred             CCC------CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCC
T ss_conf             418------9991103999999999859989999669993799999606876