HHsearch alignment for GI: 254780413 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=100.00 E-value=0 Score=642.99 Aligned_cols=376 Identities=21% Similarity=0.312 Sum_probs=334.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCHH
Q ss_conf 33445678888999999999999999999997422043078599838721568998848960320786443345645627
Q gi|254780413|r 428 MPQNGIEPEDVDTRINKRKMEIEVMQLCSILEATSDGIAIINREGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPS 507 (820)
Q Consensus 428 ~~~~~~~~dit~~~~~~~~L~~~~~~L~~ile~~~~gI~~~D~~G~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~ 507 (820)
T Consensus 131 ~~~~~l~~e~~~r~~~q~~l~~~~~llRs~~D~~Pdli~~rd~~g~f~gCNrafe~~~G~~e~eliG~t~~d~~~~e~a~ 210 (779)
T PRK11091 131 EAFEDLKNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLVGLTPKDVYSPEAAE 210 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHCCHHHHH
T ss_conf 99999999999989999999998899998850287515787798765341099998809998998499835527998899
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCC----EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 789999988606984022348887638972899999988717887----3999986514444345765446688789999
Q gi|254780413|r 508 VMNHYLTEILSLDLRQTLEKITLGSTKEEKLLSLRIIIKKLPFSS----CYSLTMHDISEWKQEKNKLSHAKKIAEKESS 583 (820)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~Dite~k~~e~el~~~~~~~e~~~~ 583 (820)
T Consensus 211 ~~~~~D~~v~~~~~~~~~e~w~~~--~dG~~~~~e~~k~P~~d~~g~~~G~~g~~rDITerk~aee-------aLE~Asr 281 (779)
T PRK11091 211 KVIETDEKVFRHNVSLTYEQWLDY--PDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQD-------ALEKASR 281 (779)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEC--CCCCEEEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHH-------HHHHHHH
T ss_conf 999738999864798211134664--8986678998640135389978878630016017789999-------9999999
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf 99999985234531748999999999973126877888999999999998999999999999986643188520003317
Q gi|254780413|r 584 HKSDFLARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVS 663 (820)
Q Consensus 584 ~k~~fla~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vd 663 (820)
T Consensus 282 aKS~FLAnMSHEIRTPLNgIlG~seLL~~t~L----~~eQre~l~~I~~S~~~Ll~LINDILD~SKIEaGkl~l~~~~fd 357 (779)
T PRK11091 282 DKTTFISTISHELRTPLNGIVGLSRMLLDTEL----TAEQEKYLKTIHVSAITLGNIFNDIIDMDKMDRRKLQLDNQPVD 357 (779)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 99999987268756539999999999807999----99999999999999999999999999999996699678877675
Q ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC-EEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEE
Q ss_conf 99999999999999987378089997379884-68988899999999999888871889787999999804994999999
Q gi|254780413|r 664 LDEAVSEAISLVQLYANEKRILIRTSFANNIP-RILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVR 742 (820)
Q Consensus 664 l~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp-~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~ 742 (820)
T Consensus 358 l~~ll~~v~~~~~~~A~~Kgl~l~~~~~~~lP~~v~gD~~RLrQIL~NLlsNAIKFT~~G~-V~l~v~~~~~~~l~f~V~ 436 (779)
T PRK11091 358 FTDFLADLENLSGLQAEQKGLRFDLEPLLPLPHKVITDGTRLRQILWNLISNAVKFTQQGQ-VTVRVRYEDGDMLHFEVE 436 (779)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCC-EEEEEEECCCCEEEEEEE
T ss_conf 9999999999999999974988999978999862863899999999999999977389997-799999827988999999
Q ss_pred ECCCCCCHHHHHHHCCCCEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCC
Q ss_conf 7889789888664237718734787-66678886068999999996198699997889953999996357778886
Q gi|254780413|r 743 DTGVGMTNYELEKAMKPFGQIPNSQ-QIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDTSHPH 817 (820)
Q Consensus 743 DtG~GI~~~~~~~iFepF~~~~~~~-~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~~~p~ 817 (820)
T Consensus 437 DTGiGI~~e~l~~IF~~F~Q~~~s~~~r~~~GTGLGLaI~k~LvelMGG~I~V~S~~G~GStFt~~Lpl~~~~~~~ 512 (779)
T PRK11091 437 DSGIGIPEDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAQNMGGDITVTSEEGKGSTFTLTIHAPAVAEEV 512 (779)
T ss_pred ECCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCC
T ss_conf 5799999999998705756066787776778876079999999998499799995599871799999766556677