HHsearch alignment for GI: 254780413 and conserved domain: PRK11359
>PRK11359 cAMP phosphodiesterase; Provisional.
Probab=99.78 E-value=8.9e-16 Score=133.50 Aligned_cols=240 Identities=14% Similarity=0.121 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHCCCCEEEE-ECCEEEEECHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCC--
Q ss_conf 555657899996349978997-09958872068898837984477224676112202455451356789998750586--
Q gi|254780413|r 316 DEGENLTPETVDKCPIPFFVY-SHGNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIKPVMLYRSDRT-- 392 (820)
Q Consensus 316 ~~~~~~~~~ild~lp~gv~i~-~~gri~~~N~a~~~l~G~~~~e~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~-- 392 (820)
T Consensus 8 ~~~~~~fr~~lE~s~~GIviiD~~GrIv~~N~aa~~l~GYs~eEllG~~--~~~L~p~d-~~~~~~~-~l~~~~~~g~~~ 83 (799)
T PRK11359 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN--IDMLIPRD-LRPAHPE-YIRHNREGGKAR 83 (799)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--HHHHCCCC-CCHHHHH-HHHHHHHCCCCC
T ss_conf 4547999999961885499996999099871899998792999985998--89927853-3312399-999877426554
Q ss_pred EEEEEEEEEEEEECCCEEEEE-EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCC
Q ss_conf 655999999997389449999-9963243332002333445678888999999999999999999997422043078599
Q gi|254780413|r 393 CIAASARLHTIQWNRENSLAM-TFIPFEKANQFPENMPQNGIEPEDVDTRINKRKMEIEVMQLCSILEATSDGIAIINRE 471 (820)
Q Consensus 393 ~~~~~~~~~~i~~~g~~~~~l-~~~~~~~~d~~~~~~~~~~~~~dit~~~~~~~~L~~~~~~L~~ile~~~~gI~~~D~~ 471 (820)
T Consensus 84 ~~g~~~E~~~~RKDGs~~~velsvs~i---~~~g~-i~~l~ivrDITee~----a~~e~~r~l~~~ld~~~~~I~i~D~~ 155 (799)
T PRK11359 84 VEGMSRELQLEKKDGSKIWTRFALSKV---SAEGK-VYYLALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPE 155 (799)
T ss_pred CCCCEEEEEEECCCCCEEEEEEEEEEE---CCCCC-EEEEEEEEECCHHH----HHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 456404899985888899999999776---47992-89999999768999----99999999999986268729999189
Q ss_pred CEEEEEHHHHHHHHCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCC
Q ss_conf 838721568998848960320786443345-6456277899999886069840223488876389728999999887178
Q gi|254780413|r 472 GIILSTNRAVSKLFGYPVEDILRKPFTVFL-EQNTPSVMNHYLTEILSLDLRQTLEKITLGSTKEEKLLSLRIIIKKLPF 550 (820)
Q Consensus 472 G~i~~~N~a~~~l~G~~~~el~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (820)
T Consensus 156 g~i~~vN~a~~el~Gy~~eEl~G~~~~~ll~~pe~~~~~~~~~~~~l~~~~--~~~~E~~~~~kdG~~~wv~~s~~pi~d 233 (799)
T PRK11359 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA--RDQDEFLLLTRTGEKIWIKASISPVYD 233 (799)
T ss_pred CCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf 878998778999859987897489889983487884799999999986489--730589998269979999989889984
Q ss_pred CC----EEEEEEEEHHHHHHHHH
Q ss_conf 87----39999865144443457
Q gi|254780413|r 551 SS----CYSLTMHDISEWKQEKN 569 (820)
Q Consensus 551 ~~----~~~~v~~Dite~k~~e~ 569 (820)
T Consensus 234 ~~g~~~~~v~i~~DITErr~~~~ 256 (799)
T PRK11359 234 VLAHLQNLVMTFSDITEERQIRQ 256 (799)
T ss_pred CCCCEEEEEEEEEECCHHHHHHH
T ss_conf 88988899999973158889999