HHsearch alignment for GI: 254780413 and conserved domain: PRK11360

>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=100.00  E-value=0  Score=541.64  Aligned_cols=346  Identities=26%  Similarity=0.430  Sum_probs=294.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
Q ss_conf             99999999999999742204307859983872156899884896032078644334564562778999998860698402
Q gi|254780413|r  445 RKMEIEVMQLCSILEATSDGIAIINREGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPSVMNHYLTEILSLDLRQT  524 (820)
Q Consensus       445 ~~L~~~~~~L~~ile~~~~gI~~~D~~G~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (820)
T Consensus       254 ~~L~~~~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~~~~l~~~~~~---~~~~~~~l~~~~~~-  329 (607)
T PRK11360        254 QALREARTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQPYSMLFDNTQF---YSPVLDTLEHGTEH-  329 (607)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHCCCHHH---HHHHHHHHHCCCCC-
T ss_conf             99999999899998610466999979994999838999985879789859679995795767---79999998537742-


Q ss_pred             EEEEEEEECCCCCEEEEEEEEEECCCC----CEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             234888763897289999998871788----7399998651444434576544668878999999999985234531748
Q gi|254780413|r  525 LEKITLGSTKEEKLLSLRIIIKKLPFS----SCYSLTMHDISEWKQEKNKLSHAKKIAEKESSHKSDFLARVSHEIRTPL  600 (820)
Q Consensus       525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~Dite~k~~e~el~~~~~~~e~~~~~k~~fla~vsHElrtPL  600 (820)
T Consensus       330 ~~~~~~~~~~~~-~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~erl-----aalGe~~A~vaHElRnPL  403 (607)
T PRK11360        330 VALEISFPGRDR-TIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARAERL-----AALGELMAGVAHEIRNPL  403 (607)
T ss_pred             CCEEEEECCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_conf             124899605883-49999998535768985889999999577899999999999999-----999999999899871549


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             99999999997312687788899999999999899999999999998664318852000331799999999999999987
Q gi|254780413|r  601 TAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYAN  680 (820)
Q Consensus       601 ~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~  680 (820)
T Consensus       404 t~I~g~~elL~~~~----~~~~~~~~l~~i~~e~~Rl~~li~~lL~~sr~~~~----~~~~v~l~~l~~~~~~~~~~~~~  475 (607)
T PRK11360        404 TAIRGYVQILRQQT----SDPIHQEYLSVVLREVDSLNKVIQQLLEFSRPRHS----QWQQVSLNALVEEVLVLVQTAGV  475 (607)
T ss_pred             HHHHHHHHHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCEECHHHHHHHHHHHHHHHHH
T ss_conf             99999999986689----98799999999999999999999999985277888----88478699999999999999888


Q ss_pred             HCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCC
Q ss_conf             37808999737988468988899999999999888871889787999999804994999999788978988866423771
Q gi|254780413|r  681 EKRILIRTSFANNIPRILADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPF  760 (820)
Q Consensus       681 ~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF  760 (820)
T Consensus       476 ~~~i~l~~~~~~~~~~v~~D~~~l~qvl~NLi~NAi~a~~~~g~I~i~~~~~~~~~v~i~V~D~G~GI~~e~~~~IFepF  555 (607)
T PRK11360        476 QARVDFITELDNELPPINADRELLKQVLLNILINAVQAISARGKIRIRTWQYSDSQQAISIEDNGCGIDLELLKKIFDPF  555 (607)
T ss_pred             HCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCC
T ss_conf             67968999818988769988899999999999996286289967999999936987999999867686989996455897


Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             873478766678886068999999996198699997889953999996357778
Q gi|254780413|r  761 GQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDTS  814 (820)
Q Consensus       761 ~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~~  814 (820)
T Consensus       556 ~ttk------~~GtGLGLaI~k~Ive~hgG~I~v~S~~g~GT~F~i~LPl~~~~  603 (607)
T PRK11360        556 FTTK------ASGTGLGLALSQRIINAHQGDIRVASLPGYGTTFTLILPINPQG  603 (607)
T ss_pred             CCCC------CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCC
T ss_conf             5489------99813379999999998899899996699986999998068988