HHsearch alignment for GI: 254780413 and conserved domain: PRK11360

>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=98.79  E-value=4.5e-07  Score=69.78  Aligned_cols=128  Identities=16%  Similarity=0.201  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHCCCCEE-EEECCEEEEECHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCE-E
Q ss_conf             556578999963499789-97099588720688988379844772246761122024554513567899987505866-5
Q gi|254780413|r  317 EGENLTPETVDKCPIPFF-VYSHGNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIKPVMLYRSDRTC-I  394 (820)
Q Consensus       317 ~~~~~~~~ild~lp~gv~-i~~~gri~~~N~a~~~l~G~~~~e~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~-~  394 (820)
T Consensus       258 ~~~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~--~~~l~~~~~~-----~~~~~~~l~~~~~~~  330 (607)
T PRK11360        258 EARTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQP--YSMLFDNTQF-----YSPVLDTLEHGTEHV  330 (607)
T ss_pred             HHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--HHHHCCCHHH-----HHHHHHHHHCCCCCC
T ss_conf             999989999861046699997999499983899998587978985967--9995795767-----799999985377421


Q ss_pred             EEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             59999999973894499999963243332002333445678888999999999999999999
Q gi|254780413|r  395 AASARLHTIQWNRENSLAMTFIPFEKANQFPENMPQNGIEPEDVDTRINKRKMEIEVMQLCS  456 (820)
Q Consensus       395 ~~~~~~~~i~~~g~~~~~l~~~~~~~~d~~~~~~~~~~~~~dit~~~~~~~~L~~~~~~L~~  456 (820)
T Consensus       331 ~~~~~~--~~~~~--~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~e-rlaa  387 (607)
T PRK11360        331 ALEISF--PGRDR--TIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARAE-RLAA  387 (607)
T ss_pred             CEEEEE--CCCCC--EEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHH-HHHH
T ss_conf             248996--05883--499999985357689858899999995778999999999999-9999