HHsearch alignment for GI: 254780413 and conserved domain: TIGR00585
>TIGR00585 mutl DNA mismatch repair protein MutL; InterPro: IPR014763 This entry represents DNA mismatch repair proteins, such as MutL. The dimeric MutL protein has a key function in communicating mismatch recognition by MutS to downstream repair processes. Mismatch repair contributes to the overall fidelity of DNA replication by targeting mispaired bases that arise through replication errors during homologous recombination and as a result of DNA damage. It involves the correction of mismatched base pairs that have been missed by the proofreading element of the DNA polymerase complex ..
Probab=97.76 E-value=9.6e-05 Score=52.71 Aligned_cols=58 Identities=16% Similarity=0.263 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEC
Q ss_conf 99999999998888718897879999998049949999997889789888664237718734
Q gi|254780413|r 703 SVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIP 764 (820)
Q Consensus 703 ~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~ 764 (820)
T Consensus 22 ~p~~vVKELvENSLDAGAt--~I~v~--~~~gG~~~I~V~DNG~Gi~~~d~~~~~~~haTSK 79 (367)
T TIGR00585 22 RPASVVKELVENSLDAGAT--KIEVE--IEEGGLKLIEVSDNGSGIDKEDLELACERHATSK 79 (367)
T ss_pred HHHHHHHHHHHHHHCCCCC--EEEEE--EEECCEEEEEEEECCCCCCHHHHHHHHCCCCCCC
T ss_conf 2799999988731214885--89999--9626535899997785677777998612357763