HHsearch alignment for GI: 254780413 and conserved domain: cd00075
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins.
Probab=99.92 E-value=1.1e-24 Score=198.83 Aligned_cols=102 Identities=37% Similarity=0.648 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHCCCC-CCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 999999999888871889-7879999998049949999997889789888664237718734787666788860689999
Q gi|254780413|r 704 VKQIALNILSNAIHFTPS-GGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAK 782 (820)
Q Consensus 704 l~Qvl~NLl~NAik~t~~-gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k 782 (820)
T Consensus 1 l~~vl~nLl~NAik~~~~~~~~I~i~~~-~~~~~~~i~V~D~G~Gi~~~~~~~if~~f~~~~~--~~~~~g~GlGL~i~~ 77 (103)
T cd00075 1 LQQVLLNLLSNAIKHTPEGGGRITISVE-RDGDHLEIRVEDNGPGIPEEDLERIFERFSDGSR--SRKGGGTGLGLSIVK 77 (103)
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEEE-ECCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCC--CCCCCCCCCHHHHHH
T ss_conf 9699999999999867899948999999-8399999999977994088999760697501788--877898650599999
Q ss_pred HHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf 99996198699997889953999996
Q gi|254780413|r 783 AMVDANMGKFYIFSTPAKGTLIEIIF 808 (820)
Q Consensus 783 ~iVe~hgG~i~v~S~pG~Gt~f~v~l 808 (820)
T Consensus 78 ~i~~~~~G~i~i~s~~~~Gt~~~i~l 103 (103)
T cd00075 78 KLVELHGGRIEVESEPGGGTTFTITL 103 (103)
T ss_pred HHHHHCCCEEEEEECCCCCEEEEEEC
T ss_conf 99998899899996599919999989