HHsearch alignment for GI: 254780413 and conserved domain: smart00387
>smart00387 HATPase_c Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Probab=99.95 E-value=2.7e-27 Score=217.78 Aligned_cols=111 Identities=33% Similarity=0.582 Sum_probs=102.3
Q ss_pred ECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHH
Q ss_conf 88899999999999888871889787999999804994999999788978988866423771873478766678886068
Q gi|254780413|r 699 ADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGL 778 (820)
Q Consensus 699 ~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGL 778 (820)
T Consensus 1 ~d~~~l~~il~Nli~NAik~~~~~~~I~i~~~~~-~~~~~i~V~D~G~Gi~~~~~~~if~~f~~~~~~-~~~~~g~GlGL 78 (111)
T smart00387 1 GDPDRLRQVLSNLLDNAIKYTPEGGRITVTLERD-GDHLEITVEDNGPGIPPEDLEKIFEPFFRTDGR-SRKIGGTGLGL 78 (111)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC-CCEEEEEEEECCCCCCHHHHHHCCCCCEECCCC-CCCCCCCCHHH
T ss_conf 9889999999999999999677997899999983-999999999889973989996426994777999-98879766489
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf 999999996198699997889953999996357
Q gi|254780413|r 779 PLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLY 811 (820)
Q Consensus 779 ai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~ 811 (820)
T Consensus 79 ~i~~~i~~~~~G~i~i~s~~~~Gt~~~i~lP~~ 111 (111)
T smart00387 79 SIVKKLVELHGGEISVESEPGGGTTFTITLPLE 111 (111)
T ss_pred HHHHHHHHHCCCEEEEEECCCCEEEEEEEEECC
T ss_conf 999999998799899996599818999999819