HHsearch alignment for GI: 254780414 and conserved domain: PRK00876
>PRK00876 nadE NAD synthetase; Reviewed.
Probab=99.65 E-value=3.8e-15 Score=128.49 Aligned_cols=177 Identities=24% Similarity=0.275 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHHHH----CCCCEEEEECCCCHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCC----HHHHHHHHH
Q ss_conf 140678999999997650----444036640564047799999986223-65699997389551562----789999886
Q gi|254780414|r 203 WVMSSYHKEIVSRIKEQV----GNERVICAVSGGVDSTVAAFLIYEAIG-INLTCVLVDHGFMRKNE----VENIISLFK 273 (520)
Q Consensus 203 W~~~~~~~~~i~~Ir~~v----g~~kVi~~lSGGVDStV~A~Ll~kAig-~~l~~vfVD~GllRknE----~~~v~~~~~ 273 (520)
T Consensus 10 iD~~~e~~riv~fir~~v~~~~~~kG~VlGlSGGIDSAv~a~Lav~AlG~e~V~gl~-----MP~~~s~~~s~~~a~~la 84 (325)
T PRK00876 10 IDAAAEAERIRAFIREQVLGTLKRRGVVLGLSGGIDSSVTLALCVRALGKDRVLGLL-----MPERDSSPDSLRLGRMLA 84 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE-----CCCCCCCHHHHHHHHHHH
T ss_conf 686999999999999999851698679996876888999999999974855169997-----886568877899999999
Q ss_pred HCCCCCEEEEEHHHH------------HHHHHCCCCCHHHHHHHHHHHHHH-----HHHHHHHHC---------------
Q ss_conf 236985799758899------------999966898889999887565899-----999999743---------------
Q gi|254780414|r 274 GYPNFPLRVVDASER------------FIRKLKNIVDPETKRKVIGQLFIE-----VFEEEAKKI--------------- 321 (520)
Q Consensus 274 ~~~~~~l~~vda~~~------------Fl~~L~gv~DPE~KRkiIG~~Fi~-----vf~~~a~~~--------------- 321 (520)
T Consensus 85 ~~lGi~~~~idI~~~l~~~~~y~~~d~~i~~~~p~~~~~~~~~i~~~~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~~~l 164 (325)
T PRK00876 85 ESLGVEYVVEDISPALEALGCYERRDEAIRRVVPEYGPGWKSKLVLPNFLEGDLLNVPYLVVQDPGGEVRKKRLPPADYL 164 (325)
T ss_pred HHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 98199359984489998754313568888750333242000000023111023223101210464210000135503444
Q ss_pred ---------------------CCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf ---------------------99709986462202454202467776303443023201132032022378987389999
Q gi|254780414|r 322 ---------------------GGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLKELFKDEVR 380 (520)
Q Consensus 322 ---------------------~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~~l~KdEVR 380 (520)
T Consensus 165 ~~~a~~NiKaR~RM~~lY~~A~~~n~lVlGT--~NksE~~~G-------yfTKyGDGa-------~Di~PI~~LyKtQV~ 228 (325)
T PRK00876 165 QIVAATNFKQRTRKMVEYYHADRLNYAVAGT--PNRLEYDQG-------FFVKYGDGA-------ADLKPIAHLYKTQVY 228 (325)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCEEECC--CCHHHHHHC-------CEEEECCCC-------CCCCCCCCCCHHHHH
T ss_conf 4555323368999999999998739877658--846556635-------147544788-------784513577589999
Q ss_pred HHHHHHCCCHHHHCCCCCCC
Q ss_conf 99998199988942688898
Q gi|254780414|r 381 LLGKELRLPDSFVERHPCPG 400 (520)
Q Consensus 381 ~lg~~Lglp~~~~~RhPFPG 400 (520)
T Consensus 229 ~LA~~LgvPe~Ii~K~PSad 248 (325)
T PRK00876 229 ALAEYLGVPEEIRRRPPTTD 248 (325)
T ss_pred HHHHHCCCCHHHHCCCCCCC
T ss_conf 99998099999936999813