HHsearch alignment for GI: 254780414 and conserved domain: PRK01269

>PRK01269 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.54  E-value=7.5e-07  Score=69.18  Aligned_cols=158  Identities=21%  Similarity=0.332  Sum_probs=107.8

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--HHHHHHHHHH----CCCCCEEEEEHHHHHHHHHCC
Q ss_conf             4403664056404779999998622365699997389551562--7899998862----369857997588999999668
Q gi|254780414|r  222 NERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKNE--VENIISLFKG----YPNFPLRVVDASERFIRKLKN  295 (520)
Q Consensus       222 ~~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRknE--~~~v~~~~~~----~~~~~l~~vda~~~Fl~~L~g  295 (520)
T Consensus       177 qGkvL~LlSGGiDSPVAa~~mmKR-G~~v~~l~F~lg~~~-~e~~V~~va~~L~~~~~~~~~vr~~~V~f~~v~~eI~~~  254 (483)
T PRK01269        177 QEDVLSLISGGFDSGVASYMLMRR-GSRVHYCFFNLGGAA-HEIGVKQVAHYLWNRYGSSHRVRFISVDFEPVVGEILEK  254 (483)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHC-CCEEEEEEECCCCHH-HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
T ss_conf             786899952788838889999845-987999995799868-899999999999997388887089997679999999873


Q ss_pred             CCCHHHHHHHHH-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHH
Q ss_conf             988899998875-6589999999974399709986462202454202467776303443023201132032022378987
Q gi|254780414|r  296 IVDPETKRKVIG-QLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISFFGGPSSIIKSHHNVGGLPEHMDMKLVEPLKEL  374 (520)
Q Consensus       296 v~DPE~KRkiIG-~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~~~~~~~~IKsHHNvgglp~~~~~~liEPl~~l  374 (520)
T Consensus       255 v--~~~~~~vv~KR~M~R~A~~iA~~~-g~~ALVTG-------ESLGQVA--SQTL~---NL~~i~~~~~~pVlRPLIg~  319 (483)
T PRK01269        255 V--DNGQMGVVLKRMMLRAASKVAERY-GIQALVTG-------EALGQVS--SQTLT---NLRLIDNVTDTLILRPLIAM  319 (483)
T ss_pred             C--CHHHEEHHHHHHHHHHHHHHHHHC-CCCEEEEC-------CCHHHHH--HHHHH---HHHHHHHHCCCCEECCCCCC
T ss_conf             8--763443999999999999999985-99889855-------5034567--76787---88998874077400476679


Q ss_pred             HHHHHHHHHHHHCCCHHHHCCCC
Q ss_conf             38999999998199988942688
Q gi|254780414|r  375 FKDEVRLLGKELRLPDSFVERHP  397 (520)
Q Consensus       375 ~KdEVR~lg~~Lglp~~~~~RhP  397 (520)
T Consensus       320 DK~eII~~Ar~IGTye-~s~~~p  341 (483)
T PRK01269        320 DKEDIIDLARQIGTED-FAKTMP  341 (483)
T ss_pred             CHHHHHHHHHHHCHHH-HHCCCC
T ss_conf             8899999999839287-760368