HHsearch alignment for GI: 254780414 and conserved domain: PRK10660
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional.
Probab=98.86 E-value=6.7e-08 Score=76.70 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=99.3
Q ss_pred HCCCCEEEEECCCCHHHHHHHHHHH---HC-CCCEEEEEECCCCCCCCCHH--HHHHHHHHCCCCCEEEEEHHHHHHHHH
Q ss_conf 0444036640564047799999986---22-36569999738955156278--999988623698579975889999996
Q gi|254780414|r 220 VGNERVICAVSGGVDSTVAAFLIYE---AI-GINLTCVLVDHGFMRKNEVE--NIISLFKGYPNFPLRVVDASERFIRKL 293 (520)
Q Consensus 220 vg~~kVi~~lSGGVDStV~A~Ll~k---Ai-g~~l~~vfVD~GllRknE~~--~v~~~~~~~~~~~l~~vda~~~Fl~~L 293 (520)
T Consensus 11 ~~~~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~HvnHgl-~~~ad~~~~fv~~~c~~~~ip~~~~~~~v---~~- 85 (433)
T PRK10660 11 LESRQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIHIHHGL-SPNADSWVKHCEQVCQQWQVPLVVERVQL---AQ- 85 (433)
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC-CCCHHHHHHHHHHHHHHCCCCEEEEEEEE---CC-
T ss_conf 99998999972809999999999999986689828999971897-92669999999999997599789999872---79-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCC--CCCC-CCEEEEEECCCCHHHHH---CCCH
Q ss_conf 6898889999887565899999999743997099864622024542024--6777-63034430232011320---3202
Q gi|254780414|r 294 KNIVDPETKRKVIGQLFIEVFEEEAKKIGGAQFLGQGTLYPDVIESISF--FGGP-SSIIKSHHNVGGLPEHM---DMKL 367 (520)
Q Consensus 294 ~gv~DPE~KRkiIG~~Fi~vf~~~a~~~~~~~~L~QGTlypDvIES~~~--~~~~-~~~IKsHHNvgglp~~~---~~~l 367 (520)
T Consensus 86 ~~~~~E~aAR~~----RY~~f~~~~~~---~~~l~tAHh~dDQaETvLlrL~RGsG~~------GL~gm~~~r~~~~~~l 152 (433)
T PRK10660 86 EGLGIEAAARQA----RYQAFARTLLP---GEVLVTAQHLDDQCETFLLALKRGSGPA------GLSAMAEVSPFAGTQL 152 (433)
T ss_pred CCCCHHHHHHHH----HHHHHHHHHHH---CCEEEECCCCCHHHHHHHHHHHCCCCCC------CCCCCCCCCCCCCCEE
T ss_conf 997699999999----99999998743---8879962456519999999986589964------4567752244789707
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 23789873899999999819998
Q gi|254780414|r 368 VEPLKELFKDEVRLLGKELRLPD 390 (520)
Q Consensus 368 iEPl~~l~KdEVR~lg~~Lglp~ 390 (520)
T Consensus 153 iRPLL~~~r~eI~~Y~~~~~l~~ 175 (433)
T PRK10660 153 LRPLLARTRGELEQWAQAHGLRW 175 (433)
T ss_pred ECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 73744665999999999849980