HHsearch alignment for GI: 254780414 and conserved domain: PRK11106
>PRK11106 queuosine biosynthesis protein QueC; Provisional.
Probab=98.30 E-value=1.3e-06 Score=67.58 Aligned_cols=157 Identities=21% Similarity=0.268 Sum_probs=94.2
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHCCCCC-EEEEEHHH---HHHHHHCCC-
Q ss_conf 40366405640477999999862236569999738955156-2789999886236985-79975889---999996689-
Q gi|254780414|r 223 ERVICAVSGGVDSTVAAFLIYEAIGINLTCVLVDHGFMRKN-EVENIISLFKGYPNFP-LRVVDASE---RFIRKLKNI- 296 (520)
Q Consensus 223 ~kVi~~lSGGVDStV~A~Ll~kAig~~l~~vfVD~GllRkn-E~~~v~~~~~~~~~~~-l~~vda~~---~Fl~~L~gv- 296 (520)
T Consensus 2 kkavVLlSGGlDStt~L~~a~~~-~~~v~alsfdYGQ-rh~~El~~A~~-ia~~~gv~~h~vidl~~l~~~~~SaLt~~~ 78 (231)
T PRK11106 2 KRAVVVFSGGQDSTTCLIQALQQ-YDEVHCITFDYGQ-RHRAEIDVARE-LALKLGARAHKVLDVTLLNELAVSSLTRDS 78 (231)
T ss_pred CEEEEEECCCHHHHHHHHHHHHC-CCEEEEEEEECCC-CCHHHHHHHHH-HHHHCCCCCEEEECCHHHHHHCCCCCCCCC
T ss_conf 80899907878999999999981-9949999877786-71999999999-999859840067532777775235667778
Q ss_pred -CCHHHH--HHHHHHH--------HHHHHHHHHHHCCCCEEEEECC------CCCHH----HHHHCCCCCCCCEEEEEEC
Q ss_conf -888999--9887565--------8999999997439970998646------22024----5420246777630344302
Q gi|254780414|r 297 -VDPETK--RKVIGQL--------FIEVFEEEAKKIGGAQFLGQGT------LYPDV----IESISFFGGPSSIIKSHHN 355 (520)
Q Consensus 297 -~DPE~K--RkiIG~~--------Fi~vf~~~a~~~~~~~~L~QGT------lypDv----IES~~~~~~~~~~IKsHHN 355 (520)
T Consensus 79 i~vp~~~~~~~~~p~T~VP~RN~ifLsiAaa~Ae~~g-a~~I~~G~~~~D~sgYPDCr~eFi~a~~~------al----~ 147 (231)
T PRK11106 79 IPVPDYEPEADGLPNTFVPGRNILFLTLAAIYAYQVK-AEAVITGVCETDFSGYPDCRDEFVKALNH------AV----V 147 (231)
T ss_pred CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCHHHHHHHHH------HH----H
T ss_conf 7777765444578764671672999999999999859-99599804655668899898999999999------99----8
Q ss_pred CCCHHHHHCCCHHHHHHHHHHHHHHHHH---HHHCCCHHHHCCC
Q ss_conf 3201132032022378987389999999---9819998894268
Q gi|254780414|r 356 VGGLPEHMDMKLVEPLKELFKDEVRLLG---KELRLPDSFVERH 396 (520)
Q Consensus 356 vgglp~~~~~~liEPl~~l~KdEVR~lg---~~Lglp~~~~~Rh 396 (520)
T Consensus 148 ~g-~--~~~i~i~aPl~~l~K~eiv~l~~~~~~L~~p~~~TwSC 188 (231)
T PRK11106 148 LG-M--AKDIRFETPLMWLDKAETWALADYYGQLDLVRHETLTC 188 (231)
T ss_pred HC-C--CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 51-7--89819983777788889999998616668650235527