HHsearch alignment for GI: 254780414 and conserved domain: TIGR00313

>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.

Probab=97.03  E-value=0.00025  Score=51.14  Aligned_cols=82  Identities=29%  Similarity=0.567  Sum_probs=57.8

Q ss_pred             CEEEEEECC--CCHHHHHHHHHH-HCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCCCC---CCCCHHHHH--CC
Q ss_conf             869999889--705788998888-6594069852898988997239979999853889999999---753768980--89
Q gi|254780414|r    8 SKVLIIDFG--SQFTQLIARRVR-ESKVYCEVIAFKNALDYFKEQNPQAIILSGSPASSLDIDS---PQIPKEILE--SN   79 (520)
Q Consensus         8 ~~IlIlDfG--SQytqLIaRriR-elgVyseI~P~~~~~e~i~~~~p~GIILSGGP~SV~d~~a---p~~~~~I~~--~~   79 (520)
T Consensus       249 irv~v~RLpriSNFTD~--ePL~~~~~V~v~fl~l~~~L~-----~~d~vIiPGsk~ti~dl~~L~~~~~~~~i~~~~~~  321 (502)
T TIGR00313       249 IRVGVVRLPRISNFTDF--EPLRYEADVAVKFLELEDSLD-----GLDAVIIPGSKDTIADLKALKESGFAEEILDLAKE  321 (502)
T ss_pred             EEEEEEECCCCCCCCCC--CHHHCCCCCEEEEECCCCCCC-----CCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf             48999853763566775--221114872899832688778-----84489967996578999999746866799999606


Q ss_pred             CC-EEEECHHHHHHHHHC
Q ss_conf             98-899778999989970
Q gi|254780414|r   80 IP-LLGICYGQQIMCQSL   96 (520)
Q Consensus        80 iP-ILGICyG~QlLa~~~   96 (520)
T Consensus       322 ig~V~GICGGYQ~LG~~l  339 (502)
T TIGR00313       322 IGIVIGICGGYQMLGKEL  339 (502)
T ss_pred             CCEEEEECCCHHHHHHHH
T ss_conf             988998347602100310