HHsearch alignment for GI: 254780414 and conserved domain: TIGR00337
>TIGR00337 PyrG CTP synthase; InterPro: IPR004468 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5 upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium .; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=99.33 E-value=3.6e-12 Score=107.24 Aligned_cols=140 Identities=26% Similarity=0.386 Sum_probs=88.8
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHCCCEEEE---CCCCCC------------------
Q ss_conf 99799998538899999997537689808998899778999989970969998---698661------------------
Q gi|254780414|r 50 NPQAIILSGSPASSLDIDSPQIPKEILESNIPLLGICYGQQIMCQSLGGKTKN---SQSREF------------------ 108 (520)
Q Consensus 50 ~p~GIILSGGP~SV~d~~ap~~~~~I~~~~iPILGICyG~QlLa~~~GG~V~~---~~~~Ey------------------ 108 (520)
T Consensus 373 ~~DGILVPGGFG~RG~EGKI~Ai~yAREN~iPFLGICLGmQ~A~IEFARNV~Gl~~AnStEf~~~t~~p~~~Vv~LlpEq 452 (571)
T TIGR00337 373 EVDGILVPGGFGERGVEGKIRAIKYARENNIPFLGICLGMQLAVIEFARNVLGLKGANSTEFDPETKYPKSPVVDLLPEQ 452 (571)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCC
T ss_conf 06806836888976602478999998763697330217778889999765347988874124645577733111425322
Q ss_pred ----------------------CEEEEEECCC---CCCCCCCCCCCCCEEEEEE--CCCHH-----HCCC-CCCCEEECC
Q ss_conf ----------------------0366752388---6222787266553368600--22011-----0124-442112323
Q gi|254780414|r 109 ----------------------GRAFIEIKKN---CSLLKGMWEKGSKQQVWMS--HGDQV-----EHIP-EGFEVIASS 155 (520)
Q Consensus 109 ----------------------G~~~I~i~~~---~~lf~gl~~~~~~~~VwmS--H~D~V-----~~lP-~gf~viA~S 155 (520)
T Consensus 453 ~d~~~~~~VRt~~~~lGGTMRLG~ypc~l~~~~eWt~a~k-lY---g~~~v~ERHRHRYE~Nn~~~~~~E~~GL~vsG~S 528 (571)
T TIGR00337 453 KDQNGNKEVRTEIEDLGGTMRLGLYPCILKPGSEWTLAFK-LY---GKEEVYERHRHRYEVNNEYREELENKGLIVSGTS 528 (571)
T ss_pred CCCCCCEECCEEECCCCCEEECCCCCEEECCCCCHHHHHH-HC---CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEC
T ss_conf 2446760013010138724305872217717872326755-33---7867887124441227578989985795899986
Q ss_pred CC-CCEEEEEECCCCEE-EEEEEEHHHCCCH-HHHHHHHHH
Q ss_conf 98-31788986350011-2465212221520-257799875
Q gi|254780414|r 156 DS-TPFAFIADEKRKYY-AVQFHPEVVHTVG-GSQLIDNFV 193 (520)
Q Consensus 156 ~~-~~iaai~~~~~~iy-GVQFHPEV~hT~~-G~~iL~NFl 193 (520)
T Consensus 529 ~dg~l~EiiE~~~HP~FvA~QFHPEF~Srp~~p~plF~Gfv 569 (571)
T TIGR00337 529 PDGRLVEIIELPDHPFFVACQFHPEFTSRPNRPHPLFLGFV 569 (571)
T ss_pred CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHH
T ss_conf 99838999984797868886226751167788887505532