HHsearch alignment for GI: 254780414 and conserved domain: TIGR01536
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing); InterPro: IPR006426 These sequences represent glutamine-hydrolysing asparagine synthase. The group have a poorly conserved C-terminal extension while bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis .; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process.
Probab=96.89 E-value=0.0098 Score=39.78 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-------CCEEEEEECCC--CCCCCCHH--------HHHHHHHHCCCCCEEEE
Q ss_conf 444036640564047799999986223-------65699997389--55156278--------99998862369857997
Q gi|254780414|r 221 GNERVICAVSGGVDSTVAAFLIYEAIG-------INLTCVLVDHG--FMRKNEVE--------NIISLFKGYPNFPLRVV 283 (520)
Q Consensus 221 g~~kVi~~lSGGVDStV~A~Ll~kAig-------~~l~~vfVD~G--llRknE~~--------~v~~~~~~~~~~~l~~v 283 (520)
T Consensus 310 aDvpvG~~LSGGlDSS~vaa~a~~~~~~~~~~W~~~~~tFsigf~~~~~~~~Es~l~P~~D~P~A~~-vA~~~G~~h~~~ 388 (646)
T TIGR01536 310 ADVPVGVLLSGGLDSSLVAAIARREAPSEGVDWKGPVKTFSIGFEGDSKDFDESKLRPDDDQPYARK-VADELGTEHHEV 388 (646)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHH-HHHHHCCCCEEE
T ss_conf 0560688871716799999999997676433117743478865177876530025789986189999-999849832489
Q ss_pred E-HHHHHHHHHCCC----C--CHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 5-889999996689----8--889999887565899999999743
Q gi|254780414|r 284 D-ASERFIRKLKNI----V--DPETKRKVIGQLFIEVFEEEAKKI 321 (520)
Q Consensus 284 d-a~~~Fl~~L~gv----~--DPE~KRkiIG~~Fi~vf~~~a~~~ 321 (520)
T Consensus 389 ~~s~~e~~~~l~~v~~~~e~y~p~~~~~~~P~Yl~s---~~ar~~ 430 (646)
T TIGR01536 389 LISEEEVLKALPEVIYHLETYDPTAIRASIPLYLLS---KLARED 430 (646)
T ss_pred EECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---HHHHHC
T ss_conf 845899999988876542488543031123589999---999962