HHsearch alignment for GI: 254780414 and conserved domain: cd01750
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ.
Probab=97.76 E-value=0.00016 Score=52.51 Aligned_cols=81 Identities=27% Similarity=0.414 Sum_probs=50.5
Q ss_pred EEEEECC--CCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCC---CCCCCCHHHH---HCCCC
Q ss_conf 9999889--70578899888865940698528989889972399799998538899999---9975376898---08998
Q gi|254780414|r 10 VLIIDFG--SQFTQLIARRVRESKVYCEVIAFKNALDYFKEQNPQAIILSGSPASSLDI---DSPQIPKEIL---ESNIP 81 (520)
Q Consensus 10 IlIlDfG--SQytqLIaRriRelgVyseI~P~~~~~e~i~~~~p~GIILSGGP~SV~d~---~ap~~~~~I~---~~~iP 81 (520)
T Consensus 1 iavi~lp~isNftDf~-~l~~~~~v~v~~v~~~~---~--l~~~D~iIlPGsK~t~~DL~~l~~~Gl~~~i~~~~~~g~~ 74 (194)
T cd01750 1 IAVIRYPDISNFTDLD-PLAREPGVDVRYVEVPE---G--LGDADLIILPGSKDTIQDLAWLRKRGLAEAIKNYARAGGP 74 (194)
T ss_pred CEEEECCCCCCHHHHH-HHHCCCCCEEEEECCCC---C--CCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
T ss_conf 9788269746645547-76006993899967977---6--4669999989988389999999874979999999975997
Q ss_pred EEEECHHHHHHHHHC
Q ss_conf 899778999989970
Q gi|254780414|r 82 LLGICYGQQIMCQSL 96 (520)
Q Consensus 82 ILGICyG~QlLa~~~ 96 (520)
T Consensus 75 vlgICGGyQmLG~~i 89 (194)
T cd01750 75 VLGICGGYQMLGKYI 89 (194)
T ss_pred EEEECHHHHHHHCEE
T ss_conf 899736567300035