HHsearch alignment for GI: 254780414 and conserved domain: cd03135
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly
Probab=95.37 E-value=0.011 Score=39.45 Aligned_cols=59 Identities=15% Similarity=0.309 Sum_probs=42.1
Q ss_pred ECCCCCHHHHHHCCCCEEEECCCCCCCCC-CCCCC---CCHHHHHCCCCEEEECHHHHHHHHH
Q ss_conf 52898988997239979999853889999-99975---3768980899889977899998997
Q gi|254780414|r 37 IAFKNALDYFKEQNPQAIILSGSPASSLD-IDSPQ---IPKEILESNIPLLGICYGQQIMCQS 95 (520)
Q Consensus 37 ~P~~~~~e~i~~~~p~GIILSGGP~SV~d-~~ap~---~~~~I~~~~iPILGICyG~QlLa~~ 95 (520)
T Consensus 47 i~~d~~l~~~~~~~~D~liipGG~~~~~~l~~~~~~~~~i~~~~~~~k~i~aiC~G~~~La~a 109 (163)
T cd03135 47 VKADKTLSDVNLDDYDAIVIPGGLPGAQNLADNEKLIKLLKEFNAKGKLIAAICAAPAVLAKA 109 (163)
T ss_pred EECCCCHHHCCCCCCCEEEECCCCCHHHHHHHCHHHHHHHHHHHHHCCEEEEECHHHHHHHHC
T ss_conf 946876655782017989986898217677669999999999998299479864548999986