HHsearch alignment for GI: 254780416 and conserved domain: COG1140
>COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion].
Probab=98.52 E-value=2.7e-08 Score=64.23 Aligned_cols=59 Identities=24% Similarity=0.633 Sum_probs=51.5
Q ss_pred ECHHCCCCCCCCHHHHCCCCCCCCC--CCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCH
Q ss_conf 4722089799752674777431146--7447994013025771587874200256676346
Q gi|254780416|r 5 VTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 (113)
Q Consensus 5 v~~~C~~C~~~~Cv~~CP~~ai~~~--~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~~~ 63 (113)
T Consensus 179 LPRiCeHCLNPsCvasCPsgaiYKReEDGIVLiDQd~CRGwR~CvsgCPYKKvYfNwksgK 239 (513)
T COG1140 179 LPRLCEHCLNPSCVASCPSGAIYKREEDGIVLIDQDKCRGWRMCVSGCPYKKVYFNWKSGK 239 (513)
T ss_pred HHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEECCCCC
T ss_conf 4887764189188632886552114668669961232440344413798413676325787