HHsearch alignment for GI: 254780416 and conserved domain: COG2878

>COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion].

Probab=98.90  E-value=1.1e-10  Score=77.15  Aligned_cols=57  Identities=32%  Similarity=0.806  Sum_probs=49.9

Q ss_pred             CEEECHHCCCCCCCCHHHHCCCCCCCCCCC-EEEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             677472208979975267477743114674-47994013025771587874200256676
Q gi|254780416|r    2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE   60 (113)
Q Consensus         2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~-~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~   60 (113)
T Consensus       110 a~i~e~~ciGC--tkCiqaCpvdAivg~~~~mhtv~~dlCTGC~lCva~CPtdci~m~~~  167 (198)
T COG2878         110 ALIDEANCIGC--TKCIQACPVDAIVGATKAMHTVIADLCTGCDLCVAPCPTDCIEMQPV  167 (198)
T ss_pred             EEECCHHCCCC--HHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
T ss_conf             67512201443--98998497144312532578989988467776658798770245215