HHsearch alignment for GI: 254780416 and conserved domain: PRK08493

Probab=98.24  E-value=2.8e-07  Score=58.77  Aligned_cols=53  Identities=30%  Similarity=0.619  Sum_probs=36.4

Q ss_pred             EECHHCCCCCCCCHHHHCC----CCCCCCCCC-------------------------EEEEE-----HHHCCCCCHHHHH
Q ss_conf             7472208979975267477----743114674-------------------------47994-----0130257715878
Q gi|254780416|r    4 VVTENCILCKHTDCVEVCP----VDCFYEGEN-------------------------FLAIH-----PDECIDCGVCEPE   49 (113)
Q Consensus         4 vv~~~C~~C~~~~Cv~~CP----~~ai~~~~~-------------------------~~~id-----~~~Ci~Cg~C~~~   49 (113)
T Consensus       138 ~d~~~CI~C--~rCVr~C~ev~g~~~l~~~~rG~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~~~~~~C~~CG~Cv~v  215 (819)
T PRK08493        138 YDPSLCIVC--ERCVTVCKDKIGESALKTVPRGLDAVDKSFKESMPKDAYAVWSKKQKSLIGPVGGETLDCSFCGECIAV  215 (819)
T ss_pred             ECCCCCCCC--CHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             441317407--689999887618633665136764433422343443210012434432113567887677011425753


Q ss_pred             HHHHHCCCC
Q ss_conf             742002566
Q gi|254780416|r   50 CPVDAIKPD   58 (113)
Q Consensus        50 CP~~AI~~d   58 (113)
T Consensus       216 CP~GAL~~k  224 (819)
T PRK08493        216 CPVGALSSS  224 (819)
T ss_pred             CCCCCCCCC
T ss_conf             975325366