HHsearch alignment for GI: 254780416 and conserved domain: PRK13552
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional.
Probab=95.50 E-value=0.0063 Score=35.32 Aligned_cols=61 Identities=25% Similarity=0.495 Sum_probs=37.0
Q ss_pred HHCCCCCCCCHHHHCCCCCC---CCCC-------------------CE--EEEEH----HHCCCCCHHHHHHHHHHCCCC
Q ss_conf 22089799752674777431---1467-------------------44--79940----130257715878742002566
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCF---YEGE-------------------NF--LAIHP----DECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai---~~~~-------------------~~--~~id~----~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
T Consensus 149 ~~CI~C--g~C~saCp~~~~~~~f~GPaal~~a~r~~~D~RD~~~~erl~~~~~~~~G~~~C~~~~~C~~vCPK~-I~p- 224 (240)
T PRK13552 149 DRCIEC--GCCVAACATKQMRPDFVGAVGMNRIARFELDPRDERSDEDFYELIGNDDGVFGCMTLLGCEDNCPKD-LPL- 224 (240)
T ss_pred HHHHHH--HCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC-CCH-
T ss_conf 998875--3003238521115366688999998886618843357999999852788853899978723719889-998-
Q ss_pred CCCCHHHHHHHHHHHHH
Q ss_conf 76346899999999998
Q gi|254780416|r 59 TEPGLELWLKINSEYAT 75 (113)
Q Consensus 59 ~~~~~~~~~~~n~~~a~ 75 (113)
T Consensus 225 ----~~~I~~Lrr~~~~ 237 (240)
T PRK13552 225 ----QQQIAYLRRKMAA 237 (240)
T ss_pred ----HHHHHHHHHHHHH
T ss_conf ----9999999999997