HHsearch alignment for GI: 254780416 and conserved domain: TIGR00314

>TIGR00314 cdhA CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit; InterPro: IPR004460 Acetyl-CoA decarbonylase/synthase (ACDS) is a multienzyme complex (carbon monoxide dehydrogenase is a synonym). The ACDS complex carries out an unusual reaction involving the reversible cleavage and synthesis of acetyl-CoA in methanogens. The family contains the 4Fe-4S ferredoxin domain [C-x(2)-C-x(2)-C-x(3)-C-[PEG]] between residues 448-462 of the model.; GO: 0018492 carbon-monoxide dehydrogenase (acceptor) activity, 0006084 acetyl-CoA metabolic process.
Probab=96.52  E-value=0.00031  Score=42.37  Aligned_cols=48  Identities=27%  Similarity=0.757  Sum_probs=34.3

Q ss_pred             CHHCCCCCCCCHHHHCCCC-----CCC---C-CCCEEEEE--HHHCCCCCHHHHHHHHHHC
Q ss_conf             7220897997526747774-----311---4-67447994--0130257715878742002
Q gi|254780416|r    6 TENCILCKHTDCVEVCPVD-----CFY---E-GENFLAIH--PDECIDCGVCEPECPVDAI   55 (113)
Q Consensus         6 ~~~C~~C~~~~Cv~~CP~~-----ai~---~-~~~~~~id--~~~Ci~Cg~C~~~CP~~AI   55 (113)
T Consensus       407 a~~CT~C--g~C~~~CP~~l~v~~am~~A~~tGd~skL~~~~~~~C~aCgrCEq~Cpknip  465 (795)
T TIGR00314       407 AKKCTQC--GNCTRACPNSLRVKEAMAKAEKTGDLSKLEELLEEVCYACGRCEQVCPKNIP  465 (795)
T ss_pred             HHHCCCC--CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHCCCCCCC
T ss_conf             9836788--7754458786517999999973488668999999844556751302789882