HHsearch alignment for GI: 254780416 and conserved domain: TIGR00402

>TIGR00402 napF ferredoxin-type protein NapF; InterPro: IPR004496 Members of this family are the ferredoxin-type protein subunits of nitrate reductase. These NapF proteins are involved in electron transfer, and contain iron-sulphur centres similar to those of bacterial-type 4FE-4S ferredoxins.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0006118 electron transport.

Probab=97.08  E-value=0.00011  Score=44.86  Aligned_cols=40  Identities=25%  Similarity=0.684  Sum_probs=25.6

Q ss_pred             HHHHCCCCCCCCCCC--EE---EEEHHHCCCCCHHHHHHHHHHCC
Q ss_conf             267477743114674--47---99401302577158787420025
Q gi|254780416|r   17 CVEVCPVDCFYEGEN--FL---AIHPDECIDCGVCEPECPVDAIK   56 (113)
Q Consensus        17 Cv~~CP~~ai~~~~~--~~---~id~~~Ci~Cg~C~~~CP~~AI~   56 (113)
T Consensus       117 CQ~~C~~~AI~~~~~~~GiyqPqln~~~CNGCG~C~~~C~V~AIT  161 (161)
T TIGR00402       117 CQDACELQAIISRLELDGIYQPQLNSERCNGCGECKISCFVAAIT  161 (161)
T ss_pred             CCCCCCCCEEEEEEEECEEECCCCCCCCCCCCCCCCEECCEEECC
T ss_conf             111377504553000030124543433478656642003034249