HHsearch alignment for GI: 254780416 and conserved domain: TIGR01971
>TIGR01971 NuoI NADH-quinone oxidoreductase, chain I; InterPro: IPR010226 This entry represents the I subunit (one of 14 subunits, A to N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This family does not contain 'I' subunits from the closely related F420H2 dehydrogenase and formate hydrogenlyase complexes.; GO: 0016651 oxidoreductase activity acting on NADH or NADPH, 0006118 electron transport.
Probab=99.18 E-value=2.1e-12 Score=86.46 Aligned_cols=53 Identities=45% Similarity=0.946 Sum_probs=43.5
Q ss_pred CHHCCCCCCCCHHHHCCCCCCCC----C------C------CEEEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 72208979975267477743114----6------7------447994013025771587874200256676
Q gi|254780416|r 6 TENCILCKHTDCVEVCPVDCFYE----G------E------NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 6 ~~~C~~C~~~~Cv~~CP~~ai~~----~------~------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
T Consensus 43 ~e~CiaC--~LC~~~CP~~~I~~~~~~~~~enPv~~g~r~~~~y~In~grCifCGlC~E~CP~~AI~lt~~ 111 (129)
T TIGR01971 43 EEKCIAC--ELCARVCPADAIRVVTEERETENPVEDGKRRLKFYQINFGRCIFCGLCEEACPTDAIVLTPE 111 (129)
T ss_pred CCEEECC--CCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCC
T ss_conf 7135643--01000075444156520388888732365237896213212223307511271015433730