HHsearch alignment for GI: 254780416 and conserved domain: TIGR03048

>TIGR03048 PS_I_psaC photosystem I iron-sulfur protein PsaC. Members of this family are PsaC, an essential component of photosystem I (PS-I) reaction center in Cyanobacteria and chloroplasts. This small protein, about 80 amino acids in length, contains two copies of the ferredoxin-like 4Fe-4S binding site (pfam00037) and therefore eight conserved Cys residues. This protein is also called photosystem I subunit VII.

Probab=98.94  E-value=1.6e-10  Score=76.23  Aligned_cols=52  Identities=33%  Similarity=0.827  Sum_probs=41.8

Q ss_pred             EECHHCCCCCCCCHHHHCCCCCCCCCC------CEE--EEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf             747220897997526747774311467------447--994013025771587874200256
Q gi|254780416|r    4 VVTENCILCKHTDCVEVCPVDCFYEGE------NFL--AIHPDECIDCGVCEPECPVDAIKP   57 (113)
Q Consensus         4 vv~~~C~~C~~~~Cv~~CP~~ai~~~~------~~~--~id~~~Ci~Cg~C~~~CP~~AI~~   57 (113)
T Consensus         5 ~~~D~CIgC--~~CvrvCPt~vieMVp~dg~~~~q~~~~~RtedCIGC~~CE~aCPtdaLsi   64 (80)
T TIGR03048         5 KIYDTCIGC--TQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDCVGCKRCESACPTDFLSV   64 (80)
T ss_pred             EEECCCCCC--HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE
T ss_conf             340406680--466865884514522466654464557886100556213443089873135