HHsearch alignment for GI: 254780416 and conserved domain: TIGR03294

>TIGR03294 FrhG coenzyme F420 hydrogenase, subunit gamma. This model represents that clade of F420-dependent hydrogenases (FRH) beta subunits found exclusively and universally in methanogenic archaea. This protein contains two 4Fe-4S cluster binding domains (pfam00037) and scores above the trusted cutoff to model pfam01058 for the "NADH ubiquinone oxidoreductase, 20 Kd subunit" family.

Probab=97.60  E-value=1.3e-05  Score=49.79  Aligned_cols=28  Identities=29%  Similarity=0.825  Sum_probs=24.9

Q ss_pred             EEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             7994013025771587874200256676
Q gi|254780416|r   33 LAIHPDECIDCGVCEPECPVDAIKPDTE   60 (113)
Q Consensus        33 ~~id~~~Ci~Cg~C~~~CP~~AI~~d~~   60 (113)
T Consensus       169 ~vin~~LC~GCg~Ca~~Cp~~AI~~~~g  196 (228)
T TIGR03294       169 KVVNQGLCMGCGTCAAACPTRAIEMEDG  196 (228)
T ss_pred             HCCCCCCCCCCHHHHHHCCCCCCEEECC
T ss_conf             5246321678157785488576256538