Query gi|254780416|ref|YP_003064829.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 113
No_of_seqs 145 out of 2537
Neff 5.7
Searched_HMMs 23785
Date Mon May 30 11:18:44 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780416.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7fd1_A FD1, protein (7-Fe ferr 100.0 1.6E-31 6.7E-36 188.3 8.0 104 2-106 1-106 (106)
2 2v2k_A Ferredoxin; iron, 3Fe-4 99.9 1.5E-24 6.1E-29 150.8 5.1 103 2-112 1-105 (105)
3 1h98_A Ferredoxin; electron tr 99.9 2E-22 8.3E-27 139.3 5.4 74 2-75 1-76 (78)
4 1bc6_A 7-Fe ferredoxin; electr 99.9 2.5E-22 1E-26 138.8 4.8 75 2-76 1-77 (77)
5 2zvs_A Uncharacterized ferredo 99.7 7.7E-17 3.2E-21 109.2 5.4 71 2-74 1-77 (85)
6 3eun_A Ferredoxin; electron tr 99.6 4.5E-17 1.9E-21 110.4 3.5 56 2-59 1-62 (82)
7 1rgv_A Ferredoxin; electron tr 99.6 9E-17 3.8E-21 108.8 3.3 56 2-59 1-62 (80)
8 2fdn_A Ferredoxin; electron tr 99.6 3.3E-16 1.4E-20 105.7 3.5 54 2-57 1-54 (55)
9 2fgo_A Ferredoxin; allochromat 99.6 1.1E-15 4.7E-20 102.9 6.0 55 3-59 2-62 (82)
10 2ivf_B Ethylbenzene dehydrogen 99.5 1.9E-15 8E-20 101.6 3.3 59 3-61 145-205 (352)
11 2vpz_B NRFC protein; oxidoredu 99.5 3.8E-15 1.6E-19 100.0 2.9 59 3-61 52-111 (195)
12 1q16_B Respiratory nitrate red 99.5 1.1E-14 4.7E-19 97.5 3.6 60 2-61 177-238 (512)
13 1jnr_B Adenylylsulfate reducta 99.5 9.6E-15 4E-19 97.9 2.9 59 2-60 3-67 (150)
14 1kqf_B FDH-N beta, formate deh 99.5 1.9E-14 7.8E-19 96.3 3.7 58 3-60 94-153 (294)
15 3gyx_B Adenylylsulfate reducta 99.5 1.5E-14 6.1E-19 96.9 2.6 58 2-59 2-65 (166)
16 1ti6_B Pyrogallol hydroxytrans 99.4 9.2E-14 3.9E-18 92.6 1.8 58 3-61 62-120 (274)
17 2c42_A Pyruvate-ferredoxin oxi 99.3 8.1E-13 3.4E-17 87.5 5.1 76 2-79 681-785 (1231)
18 1xer_A Ferredoxin; electron tr 99.3 6.4E-13 2.7E-17 88.0 2.3 55 3-59 39-102 (103)
19 1hfe_L Protein (Fe-only hydrog 99.3 1.3E-12 5.7E-17 86.3 3.2 54 4-59 30-85 (421)
20 3i9v_9 NADH-quinone oxidoreduc 99.3 1.2E-12 4.9E-17 86.6 2.6 53 5-59 49-117 (182)
21 1jb0_C Photosystem I iron-sulf 99.2 7.2E-13 3E-17 87.8 0.6 55 3-59 4-66 (80)
22 1gte_A Dihydropyrimidine dehyd 99.2 6.1E-12 2.6E-16 82.7 2.1 55 2-58 946-1005(1025)
23 1f2g_A Ferredoxin II; electron 98.9 9.3E-11 3.9E-15 76.4 0.6 54 2-57 1-57 (58)
24 1kqf_B FDH-N beta, formate deh 98.7 3.5E-09 1.5E-13 67.8 2.6 57 3-63 127-192 (294)
25 1ti6_B Pyrogallol hydroxytrans 98.7 5.8E-09 2.4E-13 66.7 2.9 58 3-64 93-163 (274)
26 1rof_A Ferredoxin; electron tr 98.7 2.5E-09 1E-13 68.7 0.8 54 3-58 4-59 (60)
27 1q16_B Respiratory nitrate red 98.7 3.8E-09 1.6E-13 67.7 1.4 52 3-58 211-271 (512)
28 1h0h_B Formate dehydrogenase ( 98.7 5.9E-09 2.5E-13 66.7 2.2 57 4-60 67-130 (214)
29 1sj1_A Ferredoxin; thermostabi 98.6 3.5E-09 1.5E-13 67.9 0.2 55 3-59 5-65 (66)
30 1dwl_A Ferredoxin I; electron 98.6 1.1E-08 4.8E-13 65.1 2.2 54 3-58 3-59 (59)
31 2ivf_B Ethylbenzene dehydrogen 98.6 7.6E-09 3.2E-13 66.1 1.2 54 3-60 178-240 (352)
32 3c8y_A Iron hydrogenase 1; dit 98.6 3E-08 1.3E-12 62.8 3.7 53 4-58 142-208 (574)
33 1dax_A Ferredoxin I; electron 98.6 1.2E-08 5.1E-13 65.0 1.4 56 2-59 4-63 (64)
34 2vpz_B NRFC protein; oxidoredu 98.5 3.4E-08 1.4E-12 62.5 2.9 52 3-59 84-144 (195)
35 3bk7_A ABC transporter ATP-bin 98.4 5.9E-08 2.5E-12 61.3 2.1 54 4-57 24-86 (607)
36 3or1_A Sulfite reductase alpha 98.4 1.5E-07 6.2E-12 59.1 3.6 48 6-55 265-318 (437)
37 3mm5_A Sulfite reductase, diss 98.4 1.3E-07 5.3E-12 59.5 2.7 41 15-55 261-301 (418)
38 3mm5_B Sulfite reductase, diss 98.3 2.6E-07 1.1E-11 57.8 2.5 47 8-56 209-257 (366)
39 1h0h_B Formate dehydrogenase ( 98.2 2.5E-07 1.1E-11 57.8 1.5 53 7-63 108-169 (214)
40 1iqz_A Ferredoxin; iron-sulfer 98.1 8.3E-07 3.5E-11 55.1 1.9 57 2-61 4-72 (81)
41 3i9v_3 NADH-quinone oxidoreduc 98.0 1.1E-06 4.4E-11 54.5 1.1 51 5-57 177-237 (783)
42 1xer_A Ferredoxin; electron tr 97.9 3.2E-06 1.4E-10 51.9 1.9 34 26-59 31-64 (103)
43 3eun_A Ferredoxin; electron tr 97.8 4.1E-06 1.7E-10 51.3 1.1 28 33-60 1-28 (82)
44 3or1_B Sulfite reductase beta; 97.8 6.4E-06 2.7E-10 50.3 1.9 46 12-57 222-275 (386)
45 1hfe_L Protein (Fe-only hydrog 97.7 8.2E-06 3.5E-10 49.7 2.0 27 31-57 26-52 (421)
46 2zvs_A Uncharacterized ferredo 97.5 1.8E-05 7.5E-10 47.9 0.7 27 34-60 2-28 (85)
47 3gyx_B Adenylylsulfate reducta 97.4 3.8E-05 1.6E-09 46.1 1.4 19 7-27 44-62 (166)
48 1jb0_C Photosystem I iron-sulf 97.4 3.7E-05 1.6E-09 46.1 1.4 29 32-60 2-30 (80)
49 2fdn_A Ferredoxin; electron tr 97.4 4E-05 1.7E-09 46.0 1.2 27 33-59 1-27 (55)
50 2fgo_A Ferredoxin; allochromat 97.4 2.9E-05 1.2E-09 46.8 0.5 24 37-60 5-28 (82)
51 1jnr_B Adenylylsulfate reducta 97.3 4.6E-05 1.9E-09 45.7 1.4 25 34-58 4-33 (150)
52 1rgv_A Ferredoxin; electron tr 97.3 2E-05 8.3E-10 47.7 -0.8 25 36-60 4-28 (80)
53 2c42_A Pyruvate-ferredoxin oxi 97.3 8.4E-05 3.5E-09 44.3 2.3 47 9-57 648-705 (1231)
54 1gte_A Dihydropyrimidine dehyd 97.2 9.2E-05 3.9E-09 44.0 2.0 19 7-25 77-95 (1025)
55 1h98_A Ferredoxin; electron tr 97.2 8.9E-05 3.7E-09 44.1 1.8 27 34-60 2-30 (78)
56 1bc6_A 7-Fe ferredoxin; electr 97.2 4.8E-05 2E-09 45.5 0.0 27 33-59 1-29 (77)
57 7fd1_A FD1, protein (7-Fe ferr 97.1 0.00015 6.3E-09 42.9 1.7 25 34-58 2-28 (106)
58 1sj1_A Ferredoxin; thermostabi 97.0 0.00019 8.1E-09 42.3 2.0 27 32-58 3-29 (66)
59 2v2k_A Ferredoxin; iron, 3Fe-4 97.0 0.00021 8.7E-09 42.1 1.8 26 3-30 33-58 (105)
60 1dax_A Ferredoxin I; electron 96.8 0.00035 1.5E-08 40.9 1.5 27 31-57 2-28 (64)
61 1rof_A Ferredoxin; electron tr 96.7 0.00025 1E-08 41.7 0.6 27 32-58 2-28 (60)
62 3i9v_9 NADH-quinone oxidoreduc 96.7 0.00058 2.4E-08 39.7 2.1 22 36-57 49-70 (182)
63 1dwl_A Ferredoxin I; electron 96.6 0.00034 1.4E-08 41.0 0.7 27 32-58 1-27 (59)
64 2bs2_B Quinol-fumarate reducta 96.6 0.00018 7.5E-09 42.5 -0.9 61 6-74 148-236 (241)
65 1iqz_A Ferredoxin; iron-sulfer 96.3 0.0014 5.8E-08 37.7 2.0 22 31-52 2-23 (81)
66 2gmh_A Electron transfer flavo 96.0 0.0047 2E-07 34.8 3.6 49 14-62 521-575 (584)
67 3c8y_A Iron hydrogenase 1; dit 95.6 0.0054 2.3E-07 34.5 2.7 22 31-52 138-159 (574)
68 1f2g_A Ferredoxin II; electron 95.5 0.0025 1E-07 36.3 0.7 24 36-59 4-27 (58)
69 3bk7_A ABC transporter ATP-bin 95.1 0.0064 2.7E-07 34.1 1.7 24 2-27 62-85 (607)
70 2h88_B Succinate dehydrogenase 94.7 0.0034 1.4E-07 35.6 -0.5 47 7-56 156-230 (252)
71 1kf6_B Fumarate reductase iron 94.4 0.0042 1.8E-07 35.1 -0.7 45 7-53 146-217 (243)
72 3mm5_A Sulfite reductase, diss 91.9 0.078 3.3E-06 28.3 2.6 31 3-35 280-310 (418)
73 2wdq_B Succinate dehydrogenase 91.8 0.018 7.5E-07 31.7 -0.8 47 6-54 146-220 (238)
74 3or1_A Sulfite reductase alpha 91.6 0.094 4E-06 27.8 2.7 30 4-35 298-327 (437)
75 3cf4_A Acetyl-COA decarbonylas 90.5 0.029 1.2E-06 30.5 -0.7 46 7-54 415-469 (807)
76 3mm5_B Sulfite reductase, diss 89.0 0.2 8.6E-06 26.0 2.7 25 3-29 235-259 (366)
77 2bs2_B Quinol-fumarate reducta 88.9 0.072 3E-06 28.4 0.3 22 36-57 147-168 (241)
78 3i9v_3 NADH-quinone oxidoreduc 88.9 0.14 5.7E-06 27.0 1.7 43 7-54 218-267 (783)
79 3or1_B Sulfite reductase beta; 86.7 0.3 1.3E-05 25.1 2.4 25 4-30 253-277 (386)
80 3i9v_1 NADH-quinone oxidoreduc 67.5 0.42 1.8E-05 24.3 -1.7 48 6-55 350-409 (438)
81 2vdc_G Glutamate synthase [NAD 66.5 1.8 7.4E-05 21.0 1.3 51 6-56 19-89 (456)
82 2hr7_A Insulin receptor; hormo 30.2 6.1 0.00026 18.1 -0.8 22 8-29 224-249 (486)
No 1
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=99.97 E-value=1.6e-31 Score=188.33 Aligned_cols=104 Identities=59% Similarity=1.166 Sum_probs=98.2
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHCCC
Q ss_conf 6774722089799752674777431146744799401302577158787420025667--63468999999999986887
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPN 79 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~--~~~~~~~~~~n~~~a~~~p~ 79 (113)
+|||+++|++|+++.|+.+||++||+.++++++||+++||+||.|+.+||++||.+++ ....+.|+..|.+++..+|+
T Consensus 1 ayvi~~~C~~C~~~~C~~~CP~~AI~~~~~~~~Id~~~Ci~Cg~C~~~CP~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (106)
T 7fd1_A 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN 80 (106)
T ss_dssp CEEECGGGTTTCCCHHHHHCTTCCEEECSSCEEECTTTCCCCCTTGGGCTTCCEEEGGGCCGGGTHHHHHHHHHTTTSCB
T ss_pred CEECCCCCCCCCCCCHHHHCCCCCEECCCCEEEECHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 97705247998996524458966657477679972888888472568870577555666767899999999999852898
Q ss_pred CCCCCCCCCCHHHHCCCCCHHHHHCCC
Q ss_conf 221568788758862888714552064
Q gi|254780416|r 80 ITTKKESLPSAAKMDGVKQKYEKYFSP 106 (113)
Q Consensus 80 I~~k~~plp~a~~~~~v~~K~~~~~~~ 106 (113)
|++++.|+|++++|+++++|+ +||++
T Consensus 81 i~~~~~p~pda~~w~~v~~K~-~~~~~ 106 (106)
T 7fd1_A 81 ITEKKDPLPDAEDWDGVKGKL-QHLER 106 (106)
T ss_dssp CCSCCCCCTTHHHHTTCSCGG-GGCCC
T ss_pred CCCCCCCCCCHHHHCCCCCHH-HHHCC
T ss_conf 777899997889985984278-87249
No 2
>2v2k_A Ferredoxin; iron, 3Fe-4S, 4Fe-4S, transport, iron-sulfur, mycobacterium tuberculosis, Fe-S cluster, metal-binding, electron transfer; 1.6A {Mycobacterium smegmatis}
Probab=99.90 E-value=1.5e-24 Score=150.79 Aligned_cols=103 Identities=38% Similarity=0.778 Sum_probs=83.1
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHCCC
Q ss_conf 6774722089799752674777431146744799401302577158787420025667--63468999999999986887
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPN 79 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~--~~~~~~~~~~n~~~a~~~p~ 79 (113)
+|||+++|++|+++.|+++||++||+..+++++||+++||+||.|+.+||++||+++. ++.+..|+++|++|+..++
T Consensus 1 ~~vv~~~C~~C~~~~C~~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~~~~~~~~~~~~~e~n~~~~~~~~- 79 (105)
T 2v2k_A 1 TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQWSSYAQANADFFAELG- 79 (105)
T ss_dssp CEEECGGGTTTCCCHHHHHCTTCCEEECSSCEEECTTTCCCCCCSGGGCTTCCEEEGGGCCGGGTTHHHHHHHTTTTTC-
T ss_pred CEEECCCCCCCCCCCHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-
T ss_conf 9084976789899337776567754767998998664187926163418814568676686689999999999997368-
Q ss_pred CCCCCCCCCCHHHHCCCCCHHHHHCCCCCCCCC
Q ss_conf 221568788758862888714552064889889
Q gi|254780416|r 80 ITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 (113)
Q Consensus 80 I~~k~~plp~a~~~~~v~~K~~~~~~~~Pg~~~ 112 (113)
.+..+.+......+. +++++.|++|+
T Consensus 80 ------~p~~~~~~g~~~~d~-~~~~~~P~~~~ 105 (105)
T 2v2k_A 80 ------SPGGASKVGQTDNDP-QAIKDLPPQGE 105 (105)
T ss_dssp ------CCSCHHHHCSCSCCC-HHHHTSCCCC-
T ss_pred ------CCCCCCCCCCCCCCC-HHHHHCCCCCC
T ss_conf ------988634479897680-98863699899
No 3
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=99.86 E-value=2e-22 Score=139.29 Aligned_cols=74 Identities=46% Similarity=1.009 Sum_probs=68.9
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHH
Q ss_conf 6774722089799752674777431146744799401302577158787420025667--6346899999999998
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYAT 75 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~--~~~~~~~~~~n~~~a~ 75 (113)
|||++++|++|+++.|+++||++||+.+++.++||+++|++||.|+.+||++||+++. +..++.|+++|++||+
T Consensus 1 P~v~~e~C~~C~~~~C~~~CP~~AI~~~~~~~~i~~~~C~gCg~C~~~CP~~AI~~~~~~~~~~~~~~e~N~~l~~ 76 (78)
T 1h98_A 1 PHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIYPEEDVPEQWKSYIEKNRKLAG 76 (78)
T ss_dssp CEEECGGGTTTCCCHHHHHCTTCCEEECSSSEEECTTTCCCCCTHHHHCTTCCEEEGGGCCGGGTHHHHHHHHHTT
T ss_pred CEEECCCCCCCCCCCHHHHCCCCCEECCCCEEEEECCCCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9864600699029364765898875755998998457086423013459803628874488899999999999868
No 4
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=99.85 E-value=2.5e-22 Score=138.76 Aligned_cols=75 Identities=47% Similarity=0.956 Sum_probs=69.0
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHH
Q ss_conf 6774722089799752674777431146744799401302577158787420025667--63468999999999986
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQ 76 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~--~~~~~~~~~~n~~~a~~ 76 (113)
+|||+++|++|+.|.|+++||++||+..+++++||+++|++||.|+.+||++||.++. +..+..|+++|++|+++
T Consensus 1 a~vv~dkC~~C~~g~C~~~CP~~AI~~~~~~~~id~~~C~~Cg~C~~~CP~~AI~~~~~~~~~~~~~~~~n~~f~e~ 77 (77)
T 1bc6_A 1 AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK 77 (77)
T ss_dssp CEECCSTTTTCCCCSSTTTCTTCCEEECSSSEEECTTTCCSCCSHHHHSGGGSSEETTTSCHHHHHHHHHHHHHTTC
T ss_pred CEEECCCCCCCCCCCHHHHCCCCCEEEECCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 98808667892792538778968269719999983115928210334487227598745857899999999999676
No 5
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron- sulfur clusters, reduction potential; 1.65A {Escherichia coli k-12}
Probab=99.65 E-value=7.7e-17 Score=109.16 Aligned_cols=71 Identities=23% Similarity=0.624 Sum_probs=59.0
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC------CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 677472208979975267477743114674479940130257------7158787420025667634689999999999
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C------g~C~~~CP~~AI~~d~~~~~~~~~~~n~~~a 74 (113)
+|+||++|++| +.|+.+||++||+.+++.++||+++|++| |+|+.+||++||...++...+....|..+|.
T Consensus 1 A~~Itd~Ci~C--g~C~~~CP~~ai~~~~~~~~Id~~~C~~C~~~~~~g~Cv~~CP~~a~i~~d~~~~E~~e~l~~k~~ 77 (85)
T 2zvs_A 1 ALLITKKCINC--DMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFV 77 (85)
T ss_dssp CEEECTTCCCC--CTTTTTCTTCCEECCSSSCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECTTSCCCHHHHHHHHHH
T ss_pred CEEECCCCCCC--CCCHHHCCCCCCCCCCCCEEECCHHCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCHHHHHHHHH
T ss_conf 96759879797--830225735670127864698853446998959997444128999848989877679999999999
No 6
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} PDB: 1blu_A 3exy_A
Probab=99.65 E-value=4.5e-17 Score=110.43 Aligned_cols=56 Identities=36% Similarity=0.849 Sum_probs=52.5
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC------CHHHHHHHHHHCCCCC
Q ss_conf 677472208979975267477743114674479940130257------7158787420025667
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDAIKPDT 59 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C------g~C~~~CP~~AI~~d~ 59 (113)
++||+|+|++| +.|+.+||++||+..++..++++++|++| |.|+.+||++||..+.
T Consensus 1 a~ii~dkCi~C--g~C~~~CP~~AI~~~~~~~~~~~~~Ci~C~~~~~~G~C~~vCP~~Ai~~~~ 62 (82)
T 3eun_A 1 ALMITDECINC--DVCEPECPNGAISQGDETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDP 62 (82)
T ss_dssp CEEECTTCCCC--CTTGGGCTTCCEEECSSSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECG
T ss_pred CEEECCCCCCC--CHHHHHCCHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97879679494--489988265321115663276487082888999988851748999722899
No 7
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica K172} SCOP: d.58.1.1
Probab=99.63 E-value=9e-17 Score=108.79 Aligned_cols=56 Identities=30% Similarity=0.861 Sum_probs=52.4
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC------CHHHHHHHHHHCCCCC
Q ss_conf 677472208979975267477743114674479940130257------7158787420025667
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDAIKPDT 59 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C------g~C~~~CP~~AI~~d~ 59 (113)
+++|+|+|++| +.|+.+||++||+..+++++||+++|++| |.|+.+||++||..+.
T Consensus 1 a~~i~d~Ci~C--g~C~~~CP~~AI~~~~~~~~id~~kC~~C~~~~~~g~C~~vCP~~AI~~~~ 62 (80)
T 1rgv_A 1 ALYINDDCTAC--DACVEECPNEAITPGDPIYVIDPTKCSECVGAFDEPQCRLVCPADCIPDNP 62 (80)
T ss_dssp CBCCCSCCCCC--CTTTTTCTTCCEECCSSSCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBCG
T ss_pred CCEECCCCCCC--CHHHHHCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCEECCC
T ss_conf 92728709784--478987844202223453436600088988869979615315758475798
No 8
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=99.59 E-value=3.3e-16 Score=105.72 Aligned_cols=54 Identities=44% Similarity=1.006 Sum_probs=51.6
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 67747220897997526747774311467447994013025771587874200256
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
+||++|+|++| +.|+++||++||+..++.++||+++|++||.|+.+||++||..
T Consensus 1 A~vi~d~C~~C--g~C~~~CP~~ai~~~~~~~~i~~~~C~~Cg~C~~~CP~~AI~~ 54 (55)
T 2fdn_A 1 AYVINEACISC--GACEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp CEEECTTCCCC--CTTGGGCTTCCEECCSSSCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred CEEECCCCCCH--HHHHHHCCCCCEECCCCEEEECHHHCCCCCCCHHHCCCCCCCC
T ss_conf 98969689897--8999777722488579979976779929998622577657797
No 9
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=99.59 E-value=1.1e-15 Score=102.90 Aligned_cols=55 Identities=36% Similarity=0.882 Sum_probs=50.9
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC------CHHHHHHHHHHCCCCC
Q ss_conf 77472208979975267477743114674479940130257------7158787420025667
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDAIKPDT 59 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C------g~C~~~CP~~AI~~d~ 59 (113)
.-|||+|++| +.|+++||++||+..+++++||+++|++| |.|+.+||++||.++.
T Consensus 2 ~~itd~Ci~C--g~C~~~CP~~AI~~~~~~~~i~~~~C~~C~~~~~~G~C~~vCP~~AI~~~~ 62 (82)
T 2fgo_A 2 LKITDDCINC--DVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp BCCCTTCCCC--CTTGGGCTTCCEEECSSSEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred CCCCCCCCCC--CHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCC
T ss_conf 7835508593--678888363214440354204556286998989989814043899865898
No 10
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- bismgd enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Azoarcus SP}
Probab=99.54 E-value=1.9e-15 Score=101.65 Aligned_cols=59 Identities=22% Similarity=0.634 Sum_probs=51.9
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCC--CEEEEEHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 7747220897997526747774311467--4479940130257715878742002566763
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~--~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
|.+...|.||.+..|+.+||++||+..+ +.++||+++||||+.|+.+||++||++++..
T Consensus 145 ~~~p~~C~hC~~p~Cv~~CP~gAi~k~~~~GiV~id~~kCiGC~~C~~aCPy~a~~~~~~~ 205 (352)
T 2ivf_B 145 FYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVS 205 (352)
T ss_dssp EEEEECCCCCSSCHHHHHCTTCCEEECTTTCCEEECTTTCCCCCHHHHHCTTCCEEEETTT
T ss_pred EECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECHHHCCCHHHHHHHCCCCCEEECCCC
T ss_conf 9844403699872230607867369768984699423229476773633999981347888
No 11
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=99.51 E-value=3.8e-15 Score=100.00 Aligned_cols=59 Identities=32% Similarity=0.831 Sum_probs=51.3
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCC-EEEEEHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 77472208979975267477743114674-479940130257715878742002566763
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~-~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
+.+...|.||.++.|+++||++||+..++ .++||+++||||+.|+.+||++||+++...
T Consensus 52 ~~~p~~C~hC~~p~Cv~vCP~gA~~~~e~GiV~id~~kCiGC~~C~~aCPy~a~~~~~~~ 111 (195)
T 2vpz_B 52 EFRPEQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHPAG 111 (195)
T ss_dssp EEEEEECCCCSSCTTTTTCSSSCEEECTTSCEEECTTTCCCCCHHHHHCTTCCCEECTTS
T ss_pred EECCCCCCCCCCCCHHHHCHHHHHHCCCCCEEEECHHHCCCHHHHHHCCCCCCEEECCCC
T ss_conf 877400677999732453537675267798499655462441047546999985747887
No 12
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=99.48 E-value=1.1e-14 Score=97.49 Aligned_cols=60 Identities=23% Similarity=0.587 Sum_probs=52.4
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCC--CCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 6774722089799752674777431146--74479940130257715878742002566763
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~--~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
.+++...|.||....|+.+||++||+.. ++.++||+++|++||.|+.+||++||++++..
T Consensus 177 ~~~~~~~c~~C~~~~C~~~CP~~Ai~~~~~~g~v~id~~~C~gC~~Cv~~CPy~~~~~~~~~ 238 (512)
T 1q16_B 177 MMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKS 238 (512)
T ss_dssp CEEEEECCCCCSSCHHHHTCTTCCEEEETTTCCEEECTTTCCCCCCHHHHCTTCCEEEETTT
T ss_pred EEECHHHHCCCCCHHHHHCCCCCCEEEECCCCCEEECHHHCCCCHHHHHCCCCCCEEECCCC
T ss_conf 67660442779991465238833357514788589756646256678855998884652788
No 13
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=99.48 E-value=9.6e-15 Score=97.86 Aligned_cols=59 Identities=32% Similarity=0.629 Sum_probs=48.4
Q ss_pred CEEECHHCCCCCC---CCHHHHCCCCCCCCCCC---EEEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 6774722089799---75267477743114674---47994013025771587874200256676
Q gi|254780416|r 2 TYVVTENCILCKH---TDCVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 2 ~yvv~~~C~~C~~---~~Cv~~CP~~ai~~~~~---~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
++|..++|++|.. ..|+++||.+||+..++ .+.||++.|++||.|+.+||++||.....
T Consensus 3 p~id~~~C~gCg~c~~~~C~~~CP~~ai~~~~~~~~~~~~~~~~C~gCg~C~~~CP~~Ai~~~~~ 67 (150)
T 1jnr_B 3 SFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPDMCWECYSCVKMCPQGAIDVRGY 67 (150)
T ss_dssp EEECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred CEECHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
T ss_conf 89877777899999978300118999878507767678968240808424230328634112255
No 14
>1kqf_B FDH-N beta, formate dehydrogenase, nitrate-inducible, iron- sulfur subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=99.46 E-value=1.9e-14 Score=96.30 Aligned_cols=58 Identities=22% Similarity=0.748 Sum_probs=48.9
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCC--CCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 77472208979975267477743114--67447994013025771587874200256676
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~--~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
+++...|.||.+..|+++||++|++. .++.++||+++||||+.|+.+||++||.++..
T Consensus 94 ~~~~~~C~hC~~p~Cv~vCP~~Aa~~k~~~G~V~id~~~CiGC~~C~~aCP~~ai~~~~~ 153 (294)
T 1kqf_B 94 LIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKE 153 (294)
T ss_dssp EEEEESCCCBSSCHHHHHCCSTTSEEEETTSCEEECGGGCCCCCHHHHHCTTCCCEEETT
T ss_pred EECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCEEECC
T ss_conf 467523536899657412443540364368738715242576166875699998464167
No 15
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.46 E-value=1.5e-14 Score=96.87 Aligned_cols=58 Identities=33% Similarity=0.683 Sum_probs=49.2
Q ss_pred CEEECHHCCCCCC---CCHHHHCCCCCCCCCCC--E-EEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 6774722089799---75267477743114674--4-799401302577158787420025667
Q gi|254780416|r 2 TYVVTENCILCKH---TDCVEVCPVDCFYEGEN--F-LAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 2 ~yvv~~~C~~C~~---~~Cv~~CP~~ai~~~~~--~-~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
+||..++|+||+. +.|+.+||+++|+..++ . +.+|++.|++||.|+.+||++||....
T Consensus 2 ~~vd~~kC~gC~~~~~~~C~~~CP~~~i~~~~~~~~~~~~d~~~C~~C~~Cv~~CP~~AI~~~~ 65 (166)
T 3gyx_B 2 TYVDPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPEACWECYSCIKICPQGAITARP 65 (166)
T ss_dssp EEECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCCHHHHHCSSCCEEECC
T ss_pred CEEEHHHCCCCCCCCCCCCHHHCCCCCEEECCCCCEEEEEEHHHCCCCCCCHHHCCHHHHHHCC
T ss_conf 9997788688989998823445777788970788879997478898826252250966663127
No 16
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=99.37 E-value=9.2e-14 Score=92.56 Aligned_cols=58 Identities=19% Similarity=0.391 Sum_probs=48.8
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCC-EEEEEHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 77472208979975267477743114674-479940130257715878742002566763
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~-~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
+.+...|.||.++.|+ .||.+|++..++ .++||+++||||+.|+.+||++||+++.+.
T Consensus 62 ~~~p~~C~hC~~ppCv-~cp~gA~~k~edGiV~iD~~kCIGC~~Cv~ACPyga~~~~~~~ 120 (274)
T 1ti6_B 62 NYRPTPCMHCENAPCV-AKGNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp EEEEECCCCCTTCHHH-HHTTTSEEECTTSCEEECTTTTTTCGGGGGGCSSCCCEEETTT
T ss_pred EECCHHCCCCCCCCCC-CCCCCCEEECCCCCEEEECCCCCCCHHHHHCCCCCCEEECCCC
T ss_conf 7873102599997332-5432466881599699702514651144431987876840334
No 17
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.34 E-value=8.1e-13 Score=87.46 Aligned_cols=76 Identities=30% Similarity=0.548 Sum_probs=57.1
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCC------------------------CC---EEEEEHHHCCCCCHHHHHHHH--
Q ss_conf 6774722089799752674777431146------------------------74---479940130257715878742--
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEG------------------------EN---FLAIHPDECIDCGVCEPECPV-- 52 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~------------------------~~---~~~id~~~Ci~Cg~C~~~CP~-- 52 (113)
|.+..++||+| +.|+.+||..||... .+ .+.|||..|+|||.|+++||+
T Consensus 681 P~~d~dkCigC--~~C~~vCP~~AIr~~~~~~~e~~~ap~~f~~~~~k~~~~~g~~~~IqVdp~dCtGCgvCv~vCP~~~ 758 (1231)
T 2c42_A 681 PQWVPENCIQC--NQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKE 758 (1231)
T ss_dssp EEECTTTCCCC--CHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHCSSSS
T ss_pred CEECHHHCCCC--HHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCHHHHHHHCCCCC
T ss_conf 55661426761--4578648974784034786766257400121001255567871699977676867578985569966
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 002566763468999999999986887
Q gi|254780416|r 53 DAIKPDTEPGLELWLKINSEYATQWPN 79 (113)
Q Consensus 53 ~AI~~d~~~~~~~~~~~n~~~a~~~p~ 79 (113)
+||.+........--..|-+|+...|.
T Consensus 759 kAl~m~~~~~~~~~~~~~~~~~~~~~~ 785 (1231)
T 2c42_A 759 KALVMQPLDTQRDAQVPNLEYAARIPV 785 (1231)
T ss_dssp CSEEEEEGGGTHHHHHHHHHHHHTSCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 643166662568888888999983999
No 18
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=99.29 E-value=6.4e-13 Score=88.03 Aligned_cols=55 Identities=31% Similarity=0.593 Sum_probs=45.9
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCC---------CEEEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 7747220897997526747774311467---------44799401302577158787420025667
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~---------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
.|..++|++| +.|+.+||+++|...+ ....|+.+.|++||.|+.+||++||..+.
T Consensus 39 ~iD~d~Ci~C--g~Cv~~CP~~~i~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~~AI~~~p 102 (103)
T 1xer_A 39 GVDFDLCIAD--GSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKP 102 (103)
T ss_dssp EEETTTCCCC--CHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECC
T ss_pred EECHHHCCCC--CHHHHHCCCCCCEEECCCCCCCCCCEEEEECHHHCCCCCHHHCCCCCCCEEEEC
T ss_conf 9887999896--910346772470702345766666505887043389999402305817588419
No 19
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=99.27 E-value=1.3e-12 Score=86.28 Aligned_cols=54 Identities=30% Similarity=0.763 Sum_probs=44.4
Q ss_pred EECHHCCCCCCCCHHHHCCCCCCCCCCC--EEEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 7472208979975267477743114674--4799401302577158787420025667
Q gi|254780416|r 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 4 vv~~~C~~C~~~~Cv~~CP~~ai~~~~~--~~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
+..++|++| +.||++||+.||....+ ...++.++||+||.|+.+||++||....
T Consensus 30 id~~kC~~C--~~Cv~~CP~~Ai~~~~~~~~~~~~~~~Ci~CG~Ci~~Cp~~ai~~~~ 85 (421)
T 1hfe_L 30 IDEAKCIGC--DTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAIYEAQ 85 (421)
T ss_dssp ECTTTCCCC--CHHHHHCTTCCCBCCTTSCCBCCCGGGCCCCCTTGGGCTTCCEEESC
T ss_pred CCHHHCCCC--CHHHHHHCHHHEECCCCCCEECCCCCCCCCCCCHHHHCCCCCEEECC
T ss_conf 486578680--35987606540571257641136765477645735429754245622
No 20
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=99.26 E-value=1.2e-12 Score=86.61 Aligned_cols=53 Identities=36% Similarity=0.751 Sum_probs=44.3
Q ss_pred ECHHCCCCCCCCHHHHCCCCCCCCCC----------------CEEEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 47220897997526747774311467----------------44799401302577158787420025667
Q gi|254780416|r 5 VTENCILCKHTDCVEVCPVDCFYEGE----------------NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 5 v~~~C~~C~~~~Cv~~CP~~ai~~~~----------------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
..++||+| +.|+.+||.+||.... ....||...||.||.|+.+||++||.+..
T Consensus 49 d~e~Ci~C--~~C~~~CP~~~i~~~~~~~~~~~~~~~~~~~~~~~~Id~~rCifCG~CvevCPt~AI~~t~ 117 (182)
T 3i9v_9 49 GLEKCIGC--SLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGY 117 (182)
T ss_dssp SCBSCCCC--CHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEECS
T ss_pred CHHHCCHH--HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 31223033--0698867857538630455555565555335503877726498999835438999444248
No 21
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthesis; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 2o01_C*
Probab=99.24 E-value=7.2e-13 Score=87.76 Aligned_cols=55 Identities=29% Similarity=0.712 Sum_probs=45.6
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCC--------CEEEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 7747220897997526747774311467--------44799401302577158787420025667
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~--------~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
.++.|+|++| +.|+.+||+++|.... ....++++.|++||.|+.+||++||....
T Consensus 4 v~~~d~Ci~C--~~C~~~Cp~~~i~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 66 (80)
T 1jb0_C 4 VKIYDTCIGC--TQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRV 66 (80)
T ss_dssp EEEETTCCCC--CHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEE
T ss_pred EEECCCCCCC--CCCCCHHCCCCCEEECCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCEEEE
T ss_conf 0779889781--11101348176185526555455431033576899999540759999837175
No 22
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.16 E-value=6.1e-12 Score=82.72 Aligned_cols=55 Identities=27% Similarity=0.633 Sum_probs=47.8
Q ss_pred CEEECHHCCCCCCCCHHHHC---CCCCCCCCCC-EEEEEHHHCCCCCHHHHHHHH-HHCCCC
Q ss_conf 67747220897997526747---7743114674-479940130257715878742-002566
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVC---PVDCFYEGEN-FLAIHPDECIDCGVCEPECPV-DAIKPD 58 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~C---P~~ai~~~~~-~~~id~~~Ci~Cg~C~~~CP~-~AI~~d 58 (113)
+.|..++||+| |.|..+| +.+||..+++ .+.++.++|+|||+|..+||+ ++|.+.
T Consensus 946 ~~id~~~Ci~C--g~C~~~C~d~~yqAi~~~~~~~~~~~~~~C~GC~lC~~vCPv~~~i~mv 1005 (1025)
T 1gte_A 946 AVIDEEMCINC--GKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIIDCIRMV 1005 (1025)
T ss_dssp EEECTTTCCCC--CHHHHHHHHHSCSCEEECTTTCCEEECTTCCCCCHHHHHCSSTTTEEEE
T ss_pred CEECHHHCCCC--CCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEE
T ss_conf 12087778899--8736440789811179679865566677588758742318974536771
No 23
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=98.94 E-value=9.3e-11 Score=76.35 Aligned_cols=54 Identities=24% Similarity=0.435 Sum_probs=44.2
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCC-EEE--EEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 677472208979975267477743114674-479--94013025771587874200256
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLA--IHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~-~~~--id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
|++|.|+||+| +.|+.+||...+...++ ..+ ++++.|++||.|+.+||++||..
T Consensus 1 Pv~v~e~CigC--g~C~~~CP~~~~~~~~~~~~~~~~~~~~c~~c~~C~~~CP~~AI~~ 57 (58)
T 1f2g_A 1 PIEVNDDCMAC--EACVEICPDVFEMNEEGDKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CCBCTTTCCCC--CHHHHHCTTTEEECSSSSSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred CEEECCCCCCC--CCCHHHCCHHEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCEEC
T ss_conf 93589718470--0320349841288058974898669986678999985299531888
No 24
>1kqf_B FDH-N beta, formate dehydrogenase, nitrate-inducible, iron- sulfur subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.72 E-value=3.5e-09 Score=67.84 Aligned_cols=57 Identities=28% Similarity=0.551 Sum_probs=43.0
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCC---------HHHHHHHHHHCCCCCCCCH
Q ss_conf 774722089799752674777431146744799401302577---------1587874200256676346
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDAIKPDTEPGL 63 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg---------~C~~~CP~~AI~~d~~~~~ 63 (113)
.|..++|+|| +.|+.+||.++|+.....-++ .+|..|. +|+.+||++||.+.+.++.
T Consensus 127 ~id~~~CiGC--~~C~~aCP~~ai~~~~~~~~~--~KC~~C~~r~~~G~~PACv~aCPt~Ai~fG~~~e~ 192 (294)
T 1kqf_B 127 DFQSENCIGC--GYCIAGCPFNIPRLNKEDNRV--YKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEM 192 (294)
T ss_dssp EECGGGCCCC--CHHHHHCTTCCCEEETTTTEE--ECCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHHHH
T ss_pred EECCCCCCCH--HHHHHCCCCCCCEEECCCCCE--EECCCCHHHHHCCCCCCHHHHCCCCCEEEECHHHH
T ss_conf 7152425761--668756999984641677966--53772677773799862277501277799558997
No 25
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.69 E-value=5.8e-09 Score=66.70 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=44.8
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCC-------------HHHHHHHHHHCCCCCCCCHH
Q ss_conf 774722089799752674777431146744799401302577-------------15878742002566763468
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG-------------VCEPECPVDAIKPDTEPGLE 64 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg-------------~C~~~CP~~AI~~d~~~~~~ 64 (113)
.|..++|+|| +.|+.+||.+|++..+..-+ +++|+.|. +|+++||++||.+-..++.+
T Consensus 93 ~iD~~kCIGC--~~Cv~ACPyga~~~~~~~~~--~~KC~~C~~ri~~g~~~g~~PaCv~aCPt~Al~f~~d~~s~ 163 (274)
T 1ti6_B 93 LIDPEKAKGK--KELLDTCPYGVMYWNEEENV--AQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTTPEA 163 (274)
T ss_dssp EECTTTTTTC--GGGGGGCSSCCCEEETTTTE--EECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEECHHH
T ss_pred EEECCCCCCC--HHHHHCCCCCCEEECCCCCC--CCCCCCHHHHHHCCCCCCCCCCHHHHCCCCEEECCCCCHHH
T ss_conf 9702514651--14443198787684033477--76277506466556566888671786943105028999089
No 26
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.68 E-value=2.5e-09 Score=68.70 Aligned_cols=54 Identities=20% Similarity=0.336 Sum_probs=43.5
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEE--EEEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 7747220897997526747774311467447--9940130257715878742002566
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~--~id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
.|..++|+|| |.|+.+||...+...++.. .++.+.|.+|+.|+.+||++||..+
T Consensus 4 ~iD~~~C~gC--g~C~~~cP~~~~~~~~g~~~~~~~~~~c~~c~~c~~~CP~~AI~v~ 59 (60)
T 1rof_A 4 RVDADACIGC--GVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp EECTTTCCSC--CSSTTTCTTTBCCCSSSCCCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EEEHHHCCCC--CHHHHCCCCEEEEECCCCEEEECCHHHCCCCCEEECCCCCCCEEEE
T ss_conf 9968999291--8020518904699047864993695889350802095784825976
No 27
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.66 E-value=3.8e-09 Score=67.69 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=42.6
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCCH---------HHHHHHHHHCCCC
Q ss_conf 7747220897997526747774311467447994013025771---------5878742002566
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGV---------CEPECPVDAIKPD 58 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~---------C~~~CP~~AI~~d 58 (113)
+|..++|++| +.|+.+||.++|+.....-.+ ++|+.|+. |+.+||++||+..
T Consensus 211 ~id~~~C~gC--~~Cv~~CPy~~~~~~~~~~~~--~kC~~C~~r~~~g~~paC~~~Cp~~a~~~g 271 (512)
T 1q16_B 211 LIDQDKCRGW--RMCITGCPYKKIYFNWKSGKS--EKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp EECTTTCCCC--CCHHHHCTTCCEEEETTTTEE--EECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred EECHHHCCCC--HHHHHCCCCCCEEECCCCCCE--ECCCCCHHHHHCCCCCEEHHHCCHHHHCCC
T ss_conf 9756646256--678855998884652788852--137765257667898700533866451024
No 28
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=98.66 E-value=5.9e-09 Score=66.65 Aligned_cols=57 Identities=16% Similarity=0.375 Sum_probs=42.4
Q ss_pred EECHHCCCCCCCCHHHHCCC---CCC-CCCCC-EEEEEHH--HCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 74722089799752674777---431-14674-4799401--3025771587874200256676
Q gi|254780416|r 4 VVTENCILCKHTDCVEVCPV---DCF-YEGEN-FLAIHPD--ECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 4 vv~~~C~~C~~~~Cv~~CP~---~ai-~~~~~-~~~id~~--~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
.+...|.||.++.|+.+||+ ++| +...+ .++++++ .|+||+.|+.+||++|+.++..
T Consensus 67 ~~p~~C~HC~~p~C~~~Cp~~~~~~~~~~~~~G~v~~~~~~~~c~gC~~C~~ACP~~~~~~~~~ 130 (214)
T 1h0h_B 67 FFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTPKTKDLEDYESVISACPYDVPRKVAE 130 (214)
T ss_dssp EEEECCCCCSSCHHHHHHTTTCTTSEEECTTTCCEEECGGGGGCSCHHHHHHHCTTCCCEECTT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8140105778986524577678761688715871898245440367471111399888513456
No 29
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A
Probab=98.62 E-value=3.5e-09 Score=67.87 Aligned_cols=55 Identities=22% Similarity=0.267 Sum_probs=44.0
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEE------EEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 7747220897997526747774311467447------99401302577158787420025667
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL------AIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~------~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
.|..++|++| |.|+.+||...+...++.. .++.+.|++|+.|+.+||++||..+.
T Consensus 5 ~vD~~~Ci~C--g~C~~~cP~~~~~~~~g~~~~~~~~~~~~~~c~~c~~c~~~CP~~AI~i~e 65 (66)
T 1sj1_A 5 SVDQDTCIGD--AICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE 65 (66)
T ss_dssp EECTTTCCCC--CHHHHHCTTTEEECTTSCEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred EEEHHHCCCH--HHHHHHCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 9978989694--187574982379825896240356669868833674997417838779985
No 30
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.60 E-value=1.1e-08 Score=65.10 Aligned_cols=54 Identities=30% Similarity=0.499 Sum_probs=41.0
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCC-CCCEEE--EEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 77472208979975267477743114-674479--940130257715878742002566
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLA--IHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~-~~~~~~--id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
.|..++|++| +.|+.+||...+.. .++... .+.+.|++|+.|+.+||++||..+
T Consensus 3 ~vD~d~CigC--g~C~~~CP~~~~~~~~~~~~~~~~~~~~c~~c~~C~~~CP~~AI~vE 59 (59)
T 1dwl_A 3 VIDHEECIGC--ESCVELCPEVFAMIDGEEKAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp EESSCCCSSC--CGGGGTSTTTEEEEECSSCEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred EEEHHHCCCH--HHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEC
T ss_conf 9838989713--38423189333780589848994697574789999984991618989
No 31
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- bismgd enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Azoarcus SP}
Probab=98.59 E-value=7.6e-09 Score=66.07 Aligned_cols=54 Identities=28% Similarity=0.557 Sum_probs=43.1
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC---------CHHHHHHHHHHCCCCCC
Q ss_conf 77472208979975267477743114674479940130257---------71587874200256676
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVDAIKPDTE 60 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C---------g~C~~~CP~~AI~~d~~ 60 (113)
+|..++|+|| +.|+.+||.++++.....-. .++|+.| .+|+.+||.+||++-+-
T Consensus 178 ~id~~kCiGC--~~C~~aCPy~a~~~~~~~~~--~~KC~~C~~r~~~G~~paCv~~Cp~~Al~fG~~ 240 (352)
T 2ivf_B 178 LVDQERCKGH--RHCVEACPYKAIYFNPVSQT--SEKCILCYPRIEKGIANACNRQCPGRVRAFGYL 240 (352)
T ss_dssp EECTTTCCCC--CHHHHHCTTCCEEEETTTTE--EEECCTTHHHHTTTBCCHHHHTCTTCCEEEEET
T ss_pred EECHHHCCCH--HHHHHHCCCCCEEECCCCCC--CCCCCCCHHHHHCCCCCCCHHHCCCCCEEEEEC
T ss_conf 9423229476--77363399998134788885--106888850776799671435587362688633
No 32
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, 4Fe-4S, iron-sulfur, metal-binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.57 E-value=3e-08 Score=62.81 Aligned_cols=53 Identities=30% Similarity=0.662 Sum_probs=40.7
Q ss_pred EECHHCCCCCCCCHHHHCC----CCCCCCC--CCEEEE--------EHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 7472208979975267477----7431146--744799--------40130257715878742002566
Q gi|254780416|r 4 VVTENCILCKHTDCVEVCP----VDCFYEG--ENFLAI--------HPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 4 vv~~~C~~C~~~~Cv~~CP----~~ai~~~--~~~~~i--------d~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
+..++||+| ++||++|+ +.+|... .....| +...|+.||.|+.+||++||...
T Consensus 142 ~D~~rCI~C--~rCVr~C~e~~~~~ai~~~~rg~~~~i~~~~~~~~~~~~C~~Cg~Cv~~CP~gal~~k 208 (574)
T 3c8y_A 142 VDRTKCLLC--GRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp EEGGGCCCC--CHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred ECCCCCCCC--CCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHCCC
T ss_conf 043106278--8877606465571166565488623640355555677537656668864971040030
No 33
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.55 E-value=1.2e-08 Score=64.97 Aligned_cols=56 Identities=25% Similarity=0.458 Sum_probs=43.2
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCCCC-EE-E--EEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 677472208979975267477743114674-47-9--9401302577158787420025667
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FL-A--IHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~-~~-~--id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
.||..++||+| +.|+.+||.......++ .. + ++++.|.+|+.|+.+||++||.+.+
T Consensus 4 ~~VD~~~CigC--g~C~~~cP~~f~~~~~~~~~~v~~~~~~~~~~~~~~~~~CP~~aI~~~d 63 (64)
T 1dax_A 4 FYVDQDECIAC--ESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWED 63 (64)
T ss_dssp CEECSTTCCSC--CHHHHHCTTTEEECSSSSSEEECCGGGSCHHHHHHHHHHSSSCCEECCC
T ss_pred EEEEHHHCCCC--CCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCHHHEEEEC
T ss_conf 99921238972--4000209980799688996999558996489999999729276518602
No 34
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.52 E-value=3.4e-08 Score=62.55 Aligned_cols=52 Identities=27% Similarity=0.637 Sum_probs=42.6
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCCC---------HHHHHHHHHHCCCCC
Q ss_conf 774722089799752674777431146744799401302577---------158787420025667
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDAIKPDT 59 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg---------~C~~~CP~~AI~~d~ 59 (113)
.+..++|+|| +.|+.+||.++++..+...+ .+|..|. +|+++||++||.+-+
T Consensus 84 ~id~~kCiGC--~~C~~aCPy~a~~~~~~~~~---~KC~~C~~r~~~G~~PaCv~~Cp~~Al~fG~ 144 (195)
T 2vpz_B 84 LVDPKKCIAC--GACIAACPYDARYLHPAGYV---SKCTFCAHRLEKGKVPACVETCPTYCRTFGD 144 (195)
T ss_dssp EECTTTCCCC--CHHHHHCTTCCCEECTTSSE---ECCCTTHHHHHTTCCCHHHHSCTTCCEEEEE
T ss_pred EECHHHCCCH--HHHHHCCCCCCEEECCCCEE---EEECCCHHHHHCCCCCCHHHHCCCCCEEEEC
T ss_conf 9655462441--04754699998574788727---8804864046548867306558603489716
No 35
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi}
Probab=98.42 E-value=5.9e-08 Score=61.25 Aligned_cols=54 Identities=31% Similarity=0.728 Sum_probs=41.8
Q ss_pred EECHHC--CCCCCCCHHHHCCCC-----CCCC--CCCEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 747220--897997526747774-----3114--67447994013025771587874200256
Q gi|254780416|r 4 VVTENC--ILCKHTDCVEVCPVD-----CFYE--GENFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 4 vv~~~C--~~C~~~~Cv~~CP~~-----ai~~--~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
|..|+| ..|..-.|...||+. ||.. ..+..+|..+.|||||.|+..||++||.-
T Consensus 24 ~~~~~~~~~~~~~~~c~~~cp~~~~~~~~~~~~~~~~~~~i~e~~c~~c~~~~~~cp~~ai~i 86 (607)
T 3bk7_A 24 IDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp CCGGGCCTTTSSSCHHHHHCHHHHTTCCSEEEETTTTEEEECTTTCCCCCHHHHHCSSCCCEE
T ss_pred EEHHHCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEECCCCCCEEEE
T ss_conf 866406899787066652299754687069963777852341244666751004488530566
No 36
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A*
Probab=98.39 E-value=1.5e-07 Score=59.10 Aligned_cols=48 Identities=21% Similarity=0.384 Sum_probs=41.0
Q ss_pred CHHCCCCCCCCH------HHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHC
Q ss_conf 722089799752------67477743114674479940130257715878742002
Q gi|254780416|r 6 TENCILCKHTDC------VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 (113)
Q Consensus 6 ~~~C~~C~~~~C------v~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI 55 (113)
.+.|++| +.| +..||++||+..++.++||.++|+.||.|+.+||..+.
T Consensus 265 a~~~~~~--g~~~~~~~vv~~Cpt~ai~~~~~~l~Id~~~CvrCm~CIn~cP~al~ 318 (437)
T 3or1_A 265 AHAGRDW--GKFDIEAEVVGLCPTGCMTYESGTLSIDNKNCTRCMHCINTMPRALK 318 (437)
T ss_dssp TTTTSCC--CSCCHHHHTTTTCTTCCEEEETTEEEECGGGCCCCSHHHHHCTTTEE
T ss_pred CCCCCCC--CCCCEECCHHCCCCCCCEEECCCEEEECCCCCCCCCCCHHHCCHHHC
T ss_conf 6457756--64002334210145421364475067640005636762311997556
No 37
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=98.36 E-value=1.3e-07 Score=59.47 Aligned_cols=41 Identities=24% Similarity=0.507 Sum_probs=37.5
Q ss_pred CCHHHHCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHC
Q ss_conf 75267477743114674479940130257715878742002
Q gi|254780416|r 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 (113)
Q Consensus 15 ~~Cv~~CP~~ai~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI 55 (113)
..|+..||++||+..++.++||.++|+.||.|+.+||..+.
T Consensus 261 ~~vv~~Cpt~ai~~~~~~l~Id~~~Cv~Cg~CI~~cP~a~~ 301 (418)
T 3mm5_A 261 NEVVKLCPTGAIKWDGKELTIDNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp HHTGGGCTTCCEEECSSCEEECTTTCCCCCHHHHHCTTTEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCHHHC
T ss_conf 44134488886303698388805236855153540985336
No 38
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=98.27 E-value=2.6e-07 Score=57.76 Aligned_cols=47 Identities=19% Similarity=0.504 Sum_probs=40.1
Q ss_pred HCCCCCCCCHHHHCCCCCCCC--CCCEEEEEHHHCCCCCHHHHHHHHHHCC
Q ss_conf 208979975267477743114--6744799401302577158787420025
Q gi|254780416|r 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 (113)
Q Consensus 8 ~C~~C~~~~Cv~~CP~~ai~~--~~~~~~id~~~Ci~Cg~C~~~CP~~AI~ 56 (113)
.|..| +.|+..||++||.. .++.++||.++|+.||.|+.+||..++.
T Consensus 209 ~~~~~--~~~v~~cp~~AI~~~~~~~~v~id~e~C~~Cg~C~~~cP~~~~~ 257 (366)
T 3mm5_B 209 KTCEI--PSTVAACPTGALKPDMKNKTIKVDVEKCMYCGNCYTMCPGMPLF 257 (366)
T ss_dssp HHCCH--HHHHHTCTTCCEEEETTTTEEEECGGGCCCCCHHHHHCTTCCCC
T ss_pred HCCCC--CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHCC
T ss_conf 07233--76304387564252136876998513136665032069635425
No 39
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=98.22 E-value=2.5e-07 Score=57.83 Aligned_cols=53 Identities=17% Similarity=0.361 Sum_probs=40.4
Q ss_pred HHCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHHCCCC---------CHHHHHHHHHHCCCCCCCCH
Q ss_conf 2208979975267477743114674479940130257---------71587874200256676346
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVDAIKPDTEPGL 63 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai~~~~~~~~id~~~Ci~C---------g~C~~~CP~~AI~~d~~~~~ 63 (113)
..|++| +.|+.+||.++++...+.-++ .+|..| .+|+++||++||.+.+-++.
T Consensus 108 ~~c~gC--~~C~~ACP~~~~~~~~~~~~~--~KCd~C~~R~~~G~~PaCV~aCPt~Al~fGd~~d~ 169 (214)
T 1h0h_B 108 KDLEDY--ESVISACPYDVPRKVAESNQM--AKCDMCIDRITNGLRPACVTSCPTGAMNFGDLSEM 169 (214)
T ss_dssp GGCSCH--HHHHHHCTTCCCEECTTSSCE--ECCCTTHHHHTTTCCCHHHHHCSSSCEEEEEHHHH
T ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCE--EECCCCHHHHHCCCCCCCHHHCCCCCEEEEEHHHH
T ss_conf 403674--711113998885134567831--65777388987899862154413387899605666
No 40
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.09 E-value=8.3e-07 Score=55.07 Aligned_cols=57 Identities=30% Similarity=0.440 Sum_probs=43.4
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCCCC-CCEEEE-----------EHHHCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 6774722089799752674777431146-744799-----------40130257715878742002566763
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAI-----------HPDECIDCGVCEPECPVDAIKPDTEP 61 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~~~-~~~~~i-----------d~~~Ci~Cg~C~~~CP~~AI~~d~~~ 61 (113)
++|..++||+| |.|+..|| +.|... ++++++ .++.+..+..|+.+||++||.....+
T Consensus 4 ~~VD~~~Cigc--g~C~~~~P-evF~~~~dG~a~v~~~~~~~~~~v~~~~~~~~~~Aa~~CP~~AI~v~d~~ 72 (81)
T 1iqz_A 4 TIVDKETCIAC--GACGAAAP-DIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEP 72 (81)
T ss_dssp EEECTTTCCCC--SHHHHHCT-TTEEECTTSCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESSC
T ss_pred EEEEHHHCCCC--CHHHHHCC-HHEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECC
T ss_conf 99728889490--83757385-64038689869997168766667987999999999981956418998358
No 41
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.00 E-value=1.1e-06 Score=54.51 Aligned_cols=51 Identities=24% Similarity=0.288 Sum_probs=36.5
Q ss_pred ECHHCCCCCCCCHHHHCC----CCCCCC---CCCEEEE---EHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 472208979975267477----743114---6744799---4013025771587874200256
Q gi|254780416|r 5 VTENCILCKHTDCVEVCP----VDCFYE---GENFLAI---HPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 5 v~~~C~~C~~~~Cv~~CP----~~ai~~---~~~~~~i---d~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
..++||.| ++||.+|- ..++.. +.+..+. +...|..||.|+.+||+||+..
T Consensus 177 d~~rCI~C--~rCvr~c~ev~g~~~l~~~~rg~~~~i~~~~~~~~~~~~G~cv~~CPvGAl~~ 237 (783)
T 3i9v_3 177 DRERCIHC--KRCVRYFEEVPGDEVLDFIERGVHTFIGTMDFGLPSGFSGNITDICPVGALLD 237 (783)
T ss_dssp CTTTCCCC--CHHHHHHHHTTCCCCCEECSCTTSCCEECSSTTCCSTTTTTHHHHCSSSSEEE
T ss_pred CCCCCCCC--HHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCCCCHHHHCCCCEEEE
T ss_conf 36624345--18898876523865303312167207620244212444575021167533650
No 42
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.89 E-value=3.2e-06 Score=51.87 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 1146744799401302577158787420025667
Q gi|254780416|r 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 26 i~~~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
+......+.||+++||+||.|+.+||++||....
T Consensus 31 ~~~~~~~v~iD~d~Ci~Cg~Cv~~CP~~~i~~~~ 64 (103)
T 1xer_A 31 LGIHGTIVGVDFDLCIADGSCINACPVNVFQWYD 64 (103)
T ss_dssp CCEECSSEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred CCCCCCEEEECHHHCCCCCHHHHHCCCCCCEEEC
T ss_conf 2542588998879998969103467724707023
No 43
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} PDB: 1blu_A 3exy_A
Probab=97.78 E-value=4.1e-06 Score=51.30 Aligned_cols=28 Identities=54% Similarity=1.098 Sum_probs=23.6
Q ss_pred EEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 7994013025771587874200256676
Q gi|254780416|r 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 33 ~~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
++|..|+||+||.|+.+||++||..+..
T Consensus 1 a~ii~dkCi~Cg~C~~~CP~~AI~~~~~ 28 (82)
T 3eun_A 1 ALMITDECINCDVCEPECPNGAISQGDE 28 (82)
T ss_dssp CEEECTTCCCCCTTGGGCTTCCEEECSS
T ss_pred CEEECCCCCCCCHHHHHCCHHHEECCCC
T ss_conf 9787967949448998826532111566
No 44
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B*
Probab=97.77 E-value=6.4e-06 Score=50.29 Aligned_cols=46 Identities=28% Similarity=0.636 Sum_probs=37.5
Q ss_pred CCCCCHHHHCCCCCCCC--------CCCEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 79975267477743114--------67447994013025771587874200256
Q gi|254780416|r 12 CKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 12 C~~~~Cv~~CP~~ai~~--------~~~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
|..+.++..||++||.- ..+.+.||.++|+.||.|..+||..||..
T Consensus 222 ceip~~~~~cpt~ai~p~~~~~~~~~~~~v~I~~~~C~~Cg~C~~~cp~~ai~~ 275 (386)
T 3or1_B 222 CEIPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLSD 275 (386)
T ss_dssp CCHHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCCHHHHHCTTCCCCC
T ss_pred EECCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHC
T ss_conf 214764012564145677513226557758983776852330002388777513
No 45
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=97.74 E-value=8.2e-06 Score=49.69 Aligned_cols=27 Identities=37% Similarity=0.875 Sum_probs=23.0
Q ss_pred CEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 447994013025771587874200256
Q gi|254780416|r 31 NFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 31 ~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
..+.||+++|++|+.|+.+||++||..
T Consensus 26 ~~i~id~~kC~~C~~Cv~~CP~~Ai~~ 52 (421)
T 1hfe_L 26 HFVQIDEAKCIGCDTCSQYCPTAAIFG 52 (421)
T ss_dssp CSEEECTTTCCCCCHHHHHCTTCCCBC
T ss_pred CCEECCHHHCCCCCHHHHHHCHHHEEC
T ss_conf 766648657868035987606540571
No 46
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron- sulfur clusters, reduction potential; 1.65A {Escherichia coli k-12}
Probab=97.48 E-value=1.8e-05 Score=47.88 Aligned_cols=27 Identities=41% Similarity=1.019 Sum_probs=22.7
Q ss_pred EEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 994013025771587874200256676
Q gi|254780416|r 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 34 ~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
++..++||+||.|+.+||++||..+..
T Consensus 2 ~~Itd~Ci~Cg~C~~~CP~~ai~~~~~ 28 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMGDH 28 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECCSS
T ss_pred EEECCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf 675987979783022573567012786
No 47
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.39 E-value=3.8e-05 Score=46.13 Aligned_cols=19 Identities=32% Similarity=0.990 Sum_probs=11.1
Q ss_pred HHCCCCCCCCHHHHCCCCCCC
Q ss_conf 220897997526747774311
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCFY 27 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai~ 27 (113)
+.|++| +.|+.+||.+||.
T Consensus 44 ~~C~~C--~~Cv~~CP~~AI~ 62 (166)
T 3gyx_B 44 EACWEC--YSCIKICPQGAIT 62 (166)
T ss_dssp GGCCCC--CHHHHHCSSCCEE
T ss_pred HHCCCC--CCCHHHCCHHHHH
T ss_conf 889882--6252250966663
No 48
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthesis; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 2o01_C*
Probab=97.38 E-value=3.7e-05 Score=46.14 Aligned_cols=29 Identities=28% Similarity=0.547 Sum_probs=24.6
Q ss_pred EEEEEHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 47994013025771587874200256676
Q gi|254780416|r 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 32 ~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
..+++.|+||+||.|+.+||++||.....
T Consensus 2 h~v~~~d~Ci~C~~C~~~Cp~~~i~~~~~ 30 (80)
T 1jb0_C 2 HTVKIYDTCIGCTQCVRACPTDVLEMVPW 30 (80)
T ss_dssp CEEEEETTCCCCCHHHHHCTTCCCEEEEC
T ss_pred CCEEECCCCCCCCCCCCHHCCCCCEEECC
T ss_conf 70077988978111101348176185526
No 49
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=97.35 E-value=4e-05 Score=46.01 Aligned_cols=27 Identities=48% Similarity=1.128 Sum_probs=23.2
Q ss_pred EEEEHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 799401302577158787420025667
Q gi|254780416|r 33 LAIHPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 33 ~~id~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
+++..|+|++||.|+.+||++||..+.
T Consensus 1 A~vi~d~C~~Cg~C~~~CP~~ai~~~~ 27 (55)
T 2fdn_A 1 AYVINEACISCGACEPECPVNAISSGD 27 (55)
T ss_dssp CEEECTTCCCCCTTGGGCTTCCEECCS
T ss_pred CEEECCCCCCHHHHHHHCCCCCEECCC
T ss_conf 989696898978999777722488579
No 50
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.35 E-value=2.9e-05 Score=46.77 Aligned_cols=24 Identities=58% Similarity=1.295 Sum_probs=20.6
Q ss_pred HHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 013025771587874200256676
Q gi|254780416|r 37 PDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 37 ~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
.|+||+||.|+.+||++||..+..
T Consensus 5 td~Ci~Cg~C~~~CP~~AI~~~~~ 28 (82)
T 2fgo_A 5 TDDCINCDVCEPECPNGAISQGEE 28 (82)
T ss_dssp CTTCCCCCTTGGGCTTCCEEECSS
T ss_pred CCCCCCCCHHHHHCCHHHHHHCCC
T ss_conf 550859367888836321444035
No 51
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=97.34 E-value=4.6e-05 Score=45.67 Aligned_cols=25 Identities=36% Similarity=0.886 Sum_probs=12.3
Q ss_pred EEEHHHCCCCC-----HHHHHHHHHHCCCC
Q ss_conf 99401302577-----15878742002566
Q gi|254780416|r 34 AIHPDECIDCG-----VCEPECPVDAIKPD 58 (113)
Q Consensus 34 ~id~~~Ci~Cg-----~C~~~CP~~AI~~d 58 (113)
+||+++|++|| .|+.+||++||..+
T Consensus 4 ~id~~~C~gCg~c~~~~C~~~CP~~ai~~~ 33 (150)
T 1jnr_B 4 FVNPEKCDGCKALERTACEYICPNDLMTLD 33 (150)
T ss_dssp EECTTTCCSCCSSSSCHHHHHCTTSCEEEE
T ss_pred EECHHHCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 987777789999997830011899987850
No 52
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica K172} SCOP: d.58.1.1
Probab=97.31 E-value=2e-05 Score=47.65 Aligned_cols=25 Identities=40% Similarity=0.967 Sum_probs=20.7
Q ss_pred EHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 4013025771587874200256676
Q gi|254780416|r 36 HPDECIDCGVCEPECPVDAIKPDTE 60 (113)
Q Consensus 36 d~~~Ci~Cg~C~~~CP~~AI~~d~~ 60 (113)
..|+||+||.|+.+||++||..+..
T Consensus 4 i~d~Ci~Cg~C~~~CP~~AI~~~~~ 28 (80)
T 1rgv_A 4 INDDCTACDACVEECPNEAITPGDP 28 (80)
T ss_dssp CCSCCCCCCTTTTTCTTCCEECCSS
T ss_pred ECCCCCCCCHHHHHCCHHHHHHCCC
T ss_conf 2870978447898784420222345
No 53
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=97.29 E-value=8.4e-05 Score=44.26 Aligned_cols=47 Identities=32% Similarity=0.441 Sum_probs=33.2
Q ss_pred CCCCCCCCHHHHCCCCCC-------CCC----CCEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 089799752674777431-------146----7447994013025771587874200256
Q gi|254780416|r 9 CILCKHTDCVEVCPVDCF-------YEG----ENFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 9 C~~C~~~~Cv~~CP~~ai-------~~~----~~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
..+|. .||...|.+.+ ++. ....++|+++||+|+.|..+||..||.+
T Consensus 648 ~~g~~--lpVs~f~~~G~~P~gt~~~eKrgia~~vP~~d~dkCigC~~C~~vCP~~AIr~ 705 (1231)
T 2c42_A 648 QQGDK--LPVSAFEADGRFPLGTSQFEKRGVAINVPQWVPENCIQCNQCAFVCPHSAILP 705 (1231)
T ss_dssp TCGGG--SCGGGSCTTCCBCTTGGGGTCCCCCSEEEEECTTTCCCCCHHHHHCSSCCEEE
T ss_pred CCCCC--CCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECHHHCCCCHHHHHHCCCCEEEC
T ss_conf 58871--44110467886667510666458553475566142676145786489747840
No 54
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.23 E-value=9.2e-05 Score=44.03 Aligned_cols=19 Identities=26% Similarity=0.878 Sum_probs=10.7
Q ss_pred HHCCCCCCCCHHHHCCCCC
Q ss_conf 2208979975267477743
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDC 25 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~a 25 (113)
.+|..|.++.|...||++-
T Consensus 77 ~RC~~C~~~pC~~~CP~~~ 95 (1025)
T 1gte_A 77 MRCLKCADAPCQKSCPTHL 95 (1025)
T ss_dssp HHSCCCTTCHHHHTSTTCC
T ss_pred HHHCCCCCCCCCCCCCCCC
T ss_conf 9860798987676798999
No 55
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=97.22 E-value=8.9e-05 Score=44.12 Aligned_cols=27 Identities=26% Similarity=0.600 Sum_probs=22.8
Q ss_pred EEEHHHCCCC--CHHHHHHHHHHCCCCCC
Q ss_conf 9940130257--71587874200256676
Q gi|254780416|r 34 AIHPDECIDC--GVCEPECPVDAIKPDTE 60 (113)
Q Consensus 34 ~id~~~Ci~C--g~C~~~CP~~AI~~d~~ 60 (113)
+|++++|++| |.|+.+||++||+.+..
T Consensus 2 ~v~~e~C~~C~~~~C~~~CP~~AI~~~~~ 30 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDGGD 30 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECSS
T ss_pred EEECCCCCCCCCCCHHHHCCCCCEECCCC
T ss_conf 86460069902936476589887575599
No 56
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=97.17 E-value=4.8e-05 Score=45.54 Aligned_cols=27 Identities=30% Similarity=0.660 Sum_probs=22.7
Q ss_pred EEEEHHHCCCC--CHHHHHHHHHHCCCCC
Q ss_conf 79940130257--7158787420025667
Q gi|254780416|r 33 LAIHPDECIDC--GVCEPECPVDAIKPDT 59 (113)
Q Consensus 33 ~~id~~~Ci~C--g~C~~~CP~~AI~~d~ 59 (113)
++|..++|++| |.|+.+||++||..+.
T Consensus 1 a~vv~dkC~~C~~g~C~~~CP~~AI~~~~ 29 (77)
T 1bc6_A 1 AYVITEPCIGTKDASCVEVCPVDCIHEGE 29 (77)
T ss_dssp CEECCSTTTTCCCCSSTTTCTTCCEEECS
T ss_pred CEEECCCCCCCCCCCHHHHCCCCCEEEEC
T ss_conf 98808667892792538778968269719
No 57
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=97.07 E-value=0.00015 Score=42.90 Aligned_cols=25 Identities=36% Similarity=0.818 Sum_probs=15.9
Q ss_pred EEEHHHCCCC--CHHHHHHHHHHCCCC
Q ss_conf 9940130257--715878742002566
Q gi|254780416|r 34 AIHPDECIDC--GVCEPECPVDAIKPD 58 (113)
Q Consensus 34 ~id~~~Ci~C--g~C~~~CP~~AI~~d 58 (113)
+|..+.|++| |.|+.+||++||+.+
T Consensus 2 yvi~~~C~~C~~~~C~~~CP~~AI~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EECCCCCCCCCCCCHHHHCCCCCEECC
T ss_conf 770524799899652445896665747
No 58
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A
Probab=97.02 E-value=0.00019 Score=42.30 Aligned_cols=27 Identities=26% Similarity=0.535 Sum_probs=23.2
Q ss_pred EEEEEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 479940130257715878742002566
Q gi|254780416|r 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 32 ~~~id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
++.||+++||+||.|+.+||...+..+
T Consensus 3 rv~vD~~~Ci~Cg~C~~~cP~~~~~~~ 29 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPDVFEMND 29 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTTTEEECT
T ss_pred EEEEEHHHCCCHHHHHHHCCCEEEECC
T ss_conf 899978989694187574982379825
No 59
>2v2k_A Ferredoxin; iron, 3Fe-4S, 4Fe-4S, transport, iron-sulfur, mycobacterium tuberculosis, Fe-S cluster, metal-binding, electron transfer; 1.6A {Mycobacterium smegmatis}
Probab=96.98 E-value=0.00021 Score=42.14 Aligned_cols=26 Identities=35% Similarity=1.018 Sum_probs=15.1
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 7747220897997526747774311467
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGE 30 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~ 30 (113)
+|..++|++| +.|+.+||++||+...
T Consensus 33 ~id~~~Ci~C--g~C~~~CP~~AI~~~~ 58 (105)
T 2v2k_A 33 YIHPDECVDC--GACEPVCPVEAIYYED 58 (105)
T ss_dssp EECTTTCCCC--CCSGGGCTTCCEEEGG
T ss_pred EEECCCCCCC--CCCCCCCCCCCCCCCC
T ss_conf 9866418792--6163418814568676
No 60
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.76 E-value=0.00035 Score=40.92 Aligned_cols=27 Identities=26% Similarity=0.482 Sum_probs=22.6
Q ss_pred CEEEEEHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 447994013025771587874200256
Q gi|254780416|r 31 NFLAIHPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 31 ~~~~id~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
.+++||.++||+||.|+..||......
T Consensus 2 r~~~VD~~~CigCg~C~~~cP~~f~~~ 28 (64)
T 1dax_A 2 RKFYVDQDECIACESCVEIAPGAFAMD 28 (64)
T ss_dssp CCCEECSTTCCSCCHHHHHCTTTEEEC
T ss_pred CEEEEEHHHCCCCCCCCCCCCCEEEEC
T ss_conf 859992123897240002099807996
No 61
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=96.74 E-value=0.00025 Score=41.71 Aligned_cols=27 Identities=41% Similarity=0.802 Sum_probs=22.1
Q ss_pred EEEEEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 479940130257715878742002566
Q gi|254780416|r 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 32 ~~~id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
++.||+++|++||.|+.+||..++..+
T Consensus 2 kv~iD~~~C~gCg~C~~~cP~~~~~~~ 28 (60)
T 1rof_A 2 KVRVDADACIGCGVCENLCPDVFQLGD 28 (60)
T ss_dssp CSEECTTTCCSCCSSTTTCTTTBCCCS
T ss_pred EEEEEHHHCCCCCHHHHCCCCEEEEEC
T ss_conf 879968999291802051890469904
No 62
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=96.66 E-value=0.00058 Score=39.73 Aligned_cols=22 Identities=36% Similarity=0.912 Sum_probs=14.8
Q ss_pred EHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 4013025771587874200256
Q gi|254780416|r 36 HPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 36 d~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
|.++||+|++|+.+||++||..
T Consensus 49 d~e~Ci~C~~C~~~CP~~~i~~ 70 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYV 70 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEE
T ss_pred CHHHCCHHHHHHHHCCCCCEEE
T ss_conf 3122303306988678575386
No 63
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.63 E-value=0.00034 Score=41.00 Aligned_cols=27 Identities=33% Similarity=0.664 Sum_probs=21.9
Q ss_pred EEEEEHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 479940130257715878742002566
Q gi|254780416|r 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 (113)
Q Consensus 32 ~~~id~~~Ci~Cg~C~~~CP~~AI~~d 58 (113)
.++||+++||+||.|+.+||...++.+
T Consensus 1 tv~vD~d~CigCg~C~~~CP~~~~~~~ 27 (59)
T 1dwl_A 1 TIVIDHEECIGCESCVELCPEVFAMID 27 (59)
T ss_dssp CEEESSCCCSSCCGGGGTSTTTEEEEE
T ss_pred CEEEEHHHCCCHHHHHHHCCCCEEEEC
T ss_conf 989838989713384231893337805
No 64
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=96.60 E-value=0.00018 Score=42.49 Aligned_cols=61 Identities=16% Similarity=0.402 Sum_probs=36.6
Q ss_pred CHHCCCCCCCCHHHHCCCCCCCC----------------CC-------CEE--EEEH---HHCCCCCHHHHHHHHHHCCC
Q ss_conf 72208979975267477743114----------------67-------447--9940---13025771587874200256
Q gi|254780416|r 6 TENCILCKHTDCVEVCPVDCFYE----------------GE-------NFL--AIHP---DECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 6 ~~~C~~C~~~~Cv~~CP~~ai~~----------------~~-------~~~--~id~---~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
.+.||.| |.|+.+||+..... .. ... +.+. ..|+.||.|..+||.+- ..
T Consensus 148 ~~~Ci~C--g~C~~~CP~~~~~~~~~gp~~~~~~~r~~~d~rd~~~~~~~~~~~~~~~gi~~C~~c~~C~~vCP~gI-~~ 224 (241)
T 2bs2_B 148 LDRCIEC--GCCIAACGTKIMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNL-PL 224 (241)
T ss_dssp HHTCCCC--CHHHHTCHHHHHCTTCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTTCC-CH
T ss_pred CCCCCCC--CHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC-CH
T ss_conf 5666716--86664599843254656626788887741187216689999998527777437988588000288999-98
Q ss_pred CCCCCHHHHHHHHHHHH
Q ss_conf 67634689999999999
Q gi|254780416|r 58 DTEPGLELWLKINSEYA 74 (113)
Q Consensus 58 d~~~~~~~~~~~n~~~a 74 (113)
.+....+++++.
T Consensus 225 -----~~~I~~lrr~~~ 236 (241)
T 2bs2_B 225 -----QSKIAYLRRKMV 236 (241)
T ss_dssp -----HHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHH
T ss_conf -----999999999999
No 65
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.25 E-value=0.0014 Score=37.69 Aligned_cols=22 Identities=27% Similarity=0.892 Sum_probs=19.6
Q ss_pred CEEEEEHHHCCCCCHHHHHHHH
Q ss_conf 4479940130257715878742
Q gi|254780416|r 31 NFLAIHPDECIDCGVCEPECPV 52 (113)
Q Consensus 31 ~~~~id~~~Ci~Cg~C~~~CP~ 52 (113)
..++||.++||+||.|+..||.
T Consensus 2 ~~~~VD~~~Cigcg~C~~~~Pe 23 (81)
T 1iqz_A 2 KYTIVDKETCIACGACGAAAPD 23 (81)
T ss_dssp CEEEECTTTCCCCSHHHHHCTT
T ss_pred CEEEEEHHHCCCCCHHHHHCCH
T ss_conf 7799728889490837573856
No 66
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.97 E-value=0.0047 Score=34.82 Aligned_cols=49 Identities=22% Similarity=0.485 Sum_probs=39.5
Q ss_pred CCCHHHHCCCCCCCC-----CC-CEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 975267477743114-----67-44799401302577158787420025667634
Q gi|254780416|r 14 HTDCVEVCPVDCFYE-----GE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 (113)
Q Consensus 14 ~~~Cv~~CP~~ai~~-----~~-~~~~id~~~Ci~Cg~C~~~CP~~AI~~d~~~~ 62 (113)
.+.|...||.+.... ++ ..+.||...||.|+.|.-.+|+.-|....++.
T Consensus 521 ~~~~~~~cpa~vye~~~~~~~~~~~~~i~~~nc~hcktc~i~~p~~~i~w~~p~g 575 (584)
T 2gmh_A 521 DGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEG 575 (584)
T ss_dssp CCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCST
T ss_pred CCHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 7877614887567987416788705998688875257846307888865879899
No 67
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, 4Fe-4S, iron-sulfur, metal-binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=95.63 E-value=0.0054 Score=34.49 Aligned_cols=22 Identities=27% Similarity=0.753 Sum_probs=17.2
Q ss_pred CEEEEEHHHCCCCCHHHHHHHH
Q ss_conf 4479940130257715878742
Q gi|254780416|r 31 NFLAIHPDECIDCGVCEPECPV 52 (113)
Q Consensus 31 ~~~~id~~~Ci~Cg~C~~~CP~ 52 (113)
..+.+|+++||.|+.|+++|+.
T Consensus 138 p~i~~D~~rCI~C~rCVr~C~e 159 (574)
T 3c8y_A 138 KSLTVDRTKCLLCGRCVNACGK 159 (574)
T ss_dssp SSEEEEGGGCCCCCHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCCCCCCC
T ss_conf 7411043106278887760646
No 68
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=95.51 E-value=0.0025 Score=36.32 Aligned_cols=24 Identities=25% Similarity=0.611 Sum_probs=19.1
Q ss_pred EHHHCCCCCHHHHHHHHHHCCCCC
Q ss_conf 401302577158787420025667
Q gi|254780416|r 36 HPDECIDCGVCEPECPVDAIKPDT 59 (113)
Q Consensus 36 d~~~Ci~Cg~C~~~CP~~AI~~d~ 59 (113)
..++||+||.|+.+||...+..+.
T Consensus 4 v~e~CigCg~C~~~CP~~~~~~~~ 27 (58)
T 1f2g_A 4 VNDDCMACEACVEICPDVFEMNEE 27 (58)
T ss_dssp CTTTCCCCCHHHHHCTTTEEECSS
T ss_pred ECCCCCCCCCCHHHCCHHEEEECC
T ss_conf 897184700320349841288058
No 69
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi}
Probab=95.11 E-value=0.0064 Score=34.11 Aligned_cols=24 Identities=25% Similarity=0.688 Sum_probs=20.3
Q ss_pred CEEECHHCCCCCCCCHHHHCCCCCCC
Q ss_conf 67747220897997526747774311
Q gi|254780416|r 2 TYVVTENCILCKHTDCVEVCPVDCFY 27 (113)
Q Consensus 2 ~yvv~~~C~~C~~~~Cv~~CP~~ai~ 27 (113)
++|-.+.|+|| |.||+-||.+||.
T Consensus 62 ~~i~e~~c~~c--~~~~~~cp~~ai~ 85 (607)
T 3bk7_A 62 PIIQEASCTGC--GICVHKCPFNAIS 85 (607)
T ss_dssp EEECTTTCCCC--CHHHHHCSSCCCE
T ss_pred CEEECCCCCCC--CEEECCCCCCEEE
T ss_conf 23412446667--5100448853056
No 70
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur protein, oxidoreductase, redox enzyme; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 1zoy_B* 1zp0_B*
Probab=94.74 E-value=0.0034 Score=35.57 Aligned_cols=47 Identities=28% Similarity=0.653 Sum_probs=31.0
Q ss_pred HHCCCCCCCCHHHHCCCCC-----CC------------CC--C----CEE--EEEHH---HCCCCCHHHHHHHHHHCC
Q ss_conf 2208979975267477743-----11------------46--7----447--99401---302577158787420025
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDC-----FY------------EG--E----NFL--AIHPD---ECIDCGVCEPECPVDAIK 56 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~a-----i~------------~~--~----~~~--~id~~---~Ci~Cg~C~~~CP~~AI~ 56 (113)
..|+.| +.|+.+||... +. .+ + .++ +.++. .|+.||.|..+||.+ |.
T Consensus 156 ~~Ci~C--~~C~~~Cp~~~~~~~~f~GP~~~~~~~r~~~d~rd~~~~erl~~~~~~~g~~~C~~c~~C~~vCPkg-I~ 230 (252)
T 2h88_B 156 YECILC--ACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKG-LN 230 (252)
T ss_dssp TTCCCC--CTTGGGCHHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTC-CC
T ss_pred HHHHHH--HCHHHCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC-CC
T ss_conf 250554--1302005531118601269999999997565876300899999851788812797838522347999-99
No 71
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, complex II, quinol, quinone; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B*
Probab=94.40 E-value=0.0042 Score=35.11 Aligned_cols=45 Identities=27% Similarity=0.654 Sum_probs=30.3
Q ss_pred HHCCCCCCCCHHHHCCCCCC---CCCC-------------------CEE-EE-EH---HHCCCCCHHHHHHHHH
Q ss_conf 22089799752674777431---1467-------------------447-99-40---1302577158787420
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCF---YEGE-------------------NFL-AI-HP---DECIDCGVCEPECPVD 53 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai---~~~~-------------------~~~-~i-d~---~~Ci~Cg~C~~~CP~~ 53 (113)
..||.| +.|+.+||+-.. +.++ .++ .+ +. -.|+.|+.|..+||-+
T Consensus 146 ~~CI~C--g~C~s~Cp~~~~~~~f~GP~~~~~a~r~~~D~rd~~~~erl~~~~~~~Gi~~C~~~~~C~~vCPk~ 217 (243)
T 1kf6_B 146 SGCINC--GLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH 217 (243)
T ss_dssp GCCCCC--CHHHHHCHHHHHCTTSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTC
T ss_pred HHHCCH--HHHHHHHCHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 540200--004641051132134356999998740344640232999999865589920898868812308899
No 72
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=91.93 E-value=0.078 Score=28.26 Aligned_cols=31 Identities=19% Similarity=0.386 Sum_probs=23.3
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCCCCEEEE
Q ss_conf 774722089799752674777431146744799
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI 35 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~i 35 (113)
.|..++|++| +.|+.+||..+....+..+.|
T Consensus 280 ~Id~~~Cv~C--g~CI~~cP~a~~~g~~~G~~I 310 (418)
T 3mm5_A 280 TIDNRECVRC--MHCINKMPKALKPGDERGATI 310 (418)
T ss_dssp EECTTTCCCC--CHHHHHCTTTEECCSSEEEEE
T ss_pred EEECCCCCCC--HHHHHHCCHHHCCCCCCEEEE
T ss_conf 8805236855--153540985336777866999
No 73
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, tricarboxylic acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=91.78 E-value=0.018 Score=31.71 Aligned_cols=47 Identities=28% Similarity=0.518 Sum_probs=29.8
Q ss_pred CHHCCCCCCCCHHHHCCCC----CCCCCC-------------------CEE--EEEHH---HCCCCCHHHHHHHHHH
Q ss_conf 7220897997526747774----311467-------------------447--99401---3025771587874200
Q gi|254780416|r 6 TENCILCKHTDCVEVCPVD----CFYEGE-------------------NFL--AIHPD---ECIDCGVCEPECPVDA 54 (113)
Q Consensus 6 ~~~C~~C~~~~Cv~~CP~~----ai~~~~-------------------~~~--~id~~---~Ci~Cg~C~~~CP~~A 54 (113)
...|+.| +.|..+||+- -.+.++ .++ +.+.+ .|..|+.|..+||.+-
T Consensus 146 ~~~Ci~C--g~C~s~Cp~~~~~~~~~lGP~~l~~~~r~~~D~rd~~~~~rl~~l~~~~Gv~~Ct~c~~C~~vCPkgI 220 (238)
T 2wdq_B 146 LYECILC--ACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGL 220 (238)
T ss_dssp TTTCCCC--CTTGGGCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCC
T ss_pred HHHHHHH--CEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCC
T ss_conf 5564650--85121256430377245788999999987214554019999998636798107989889332298999
No 74
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A*
Probab=91.58 E-value=0.094 Score=27.81 Aligned_cols=30 Identities=23% Similarity=0.467 Sum_probs=22.6
Q ss_pred EECHHCCCCCCCCHHHHCCCCCCCCCCCEEEE
Q ss_conf 74722089799752674777431146744799
Q gi|254780416|r 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI 35 (113)
Q Consensus 4 vv~~~C~~C~~~~Cv~~CP~~ai~~~~~~~~i 35 (113)
+..++|++| +.|+.+||..+....+..+.|
T Consensus 298 Id~~~CvrC--m~CIn~cP~al~~g~~~G~~I 327 (437)
T 3or1_A 298 IDNKNCTRC--MHCINTMPRALKIGDERGASI 327 (437)
T ss_dssp ECGGGCCCC--SHHHHHCTTTEECCSSEEEEE
T ss_pred ECCCCCCCC--CCCHHHCCHHHCCCCCCEEEE
T ss_conf 640005636--762311997556777873899
No 75
>3cf4_A Acetyl-COA decarbonylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri}
Probab=90.46 E-value=0.029 Score=30.54 Aligned_cols=46 Identities=28% Similarity=0.738 Sum_probs=32.3
Q ss_pred HHCCCCCCCCHHHHCCCCC-----CC--CCCCE--EEEEHHHCCCCCHHHHHHHHHH
Q ss_conf 2208979975267477743-----11--46744--7994013025771587874200
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDC-----FY--EGENF--LAIHPDECIDCGVCEPECPVDA 54 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~a-----i~--~~~~~--~~id~~~Ci~Cg~C~~~CP~~A 54 (113)
..|++| +.|..+||.+- +. ...+. +.-..+.|++||.|.+.||.+-
T Consensus 415 ~~c~~~--~~~~~vcp~~~~i~~a~~~a~~gd~~~l~~~~~~ci~cg~ce~~cpk~i 469 (807)
T 3cf4_A 415 AKCADC--GACLLACPEEIDIPEAMGFAKKGDFSYFEEIHDTCIGCRRCEQVCKKEI 469 (807)
T ss_dssp HHCCCC--CHHHHHCTTCCCHHHHHHHHHTTCTHHHHHHHHHCCCCCHHHHHCTTCC
T ss_pred HHHHHC--CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 986532--4432357765556889888750543655444332023220011354456
No 76
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=89.04 E-value=0.2 Score=25.99 Aligned_cols=25 Identities=28% Similarity=0.789 Sum_probs=18.5
Q ss_pred EEECHHCCCCCCCCHHHHCCCCCCCCC
Q ss_conf 774722089799752674777431146
Q gi|254780416|r 3 YVVTENCILCKHTDCVEVCPVDCFYEG 29 (113)
Q Consensus 3 yvv~~~C~~C~~~~Cv~~CP~~ai~~~ 29 (113)
.|..++|++| +.|+.+||..++..+
T Consensus 235 ~id~e~C~~C--g~C~~~cP~~~~~~~ 259 (366)
T 3mm5_B 235 KVDVEKCMYC--GNCYTMCPGMPLFDP 259 (366)
T ss_dssp EECGGGCCCC--CHHHHHCTTCCCCCT
T ss_pred EEECCCCCCC--CHHHCCCCHHHCCCC
T ss_conf 9851313666--503206963542577
No 77
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=88.94 E-value=0.072 Score=28.45 Aligned_cols=22 Identities=32% Similarity=0.952 Sum_probs=17.4
Q ss_pred EHHHCCCCCHHHHHHHHHHCCC
Q ss_conf 4013025771587874200256
Q gi|254780416|r 36 HPDECIDCGVCEPECPVDAIKP 57 (113)
Q Consensus 36 d~~~Ci~Cg~C~~~CP~~AI~~ 57 (113)
+.+.||.||.|..+||+-+...
T Consensus 147 ~~~~Ci~Cg~C~~~CP~~~~~~ 168 (241)
T 2bs2_B 147 ELDRCIECGCCIAACGTKIMRE 168 (241)
T ss_dssp HHHTCCCCCHHHHTCHHHHHCT
T ss_pred CCCCCCCCCHHHHCCCCCCCCC
T ss_conf 4566671686664599843254
No 78
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=88.93 E-value=0.14 Score=26.95 Aligned_cols=43 Identities=19% Similarity=0.437 Sum_probs=25.3
Q ss_pred HHCCCCCCCCHHHHCCCCCCCCCCCE-------EEEEHHHCCCCCHHHHHHHHHH
Q ss_conf 22089799752674777431146744-------7994013025771587874200
Q gi|254780416|r 7 ENCILCKHTDCVEVCPVDCFYEGENF-------LAIHPDECIDCGVCEPECPVDA 54 (113)
Q Consensus 7 ~~C~~C~~~~Cv~~CP~~ai~~~~~~-------~~id~~~Ci~Cg~C~~~CP~~A 54 (113)
..|.-| |.||++|||+|+....-. +.-.+..|..|+ ..|...+
T Consensus 218 ~~~~~~--G~cv~~CPvGAl~~k~~~~~~r~wel~~~~SiC~~C~---~gC~i~v 267 (783)
T 3i9v_3 218 LPSGFS--GNITDICPVGALLDLTARFRARNWEMEETPTTCALCP---VGCGITA 267 (783)
T ss_dssp CCSTTT--TTHHHHCSSSSEEEGGGTTSCCTTTSEEEEEECCSSS---SCCEEEE
T ss_pred CCCCCC--CCHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCC---CCCCEEE
T ss_conf 124445--7502116753365022112477632420114898988---8877599
No 79
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B*
Probab=86.69 E-value=0.3 Score=25.06 Aligned_cols=25 Identities=24% Similarity=0.857 Sum_probs=20.8
Q ss_pred EECHHCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 747220897997526747774311467
Q gi|254780416|r 4 VVTENCILCKHTDCVEVCPVDCFYEGE 30 (113)
Q Consensus 4 vv~~~C~~C~~~~Cv~~CP~~ai~~~~ 30 (113)
|..++|+.| +.|+..||..||..+.
T Consensus 253 I~~~~C~~C--g~C~~~cp~~ai~~g~ 277 (386)
T 3or1_B 253 INNDRCMYC--GNCYTMCPALPLSDGT 277 (386)
T ss_dssp ECTTTCCCC--CHHHHHCTTCCCCCTT
T ss_pred EECCCCCCC--CCCCCCCCHHHHHCCC
T ss_conf 837768523--3000238877751376
No 80
>3i9v_1 NADH-quinone oxidoreductase subunit 1; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_1* 3iam_1* 3ias_1* 3m9s_1*
Probab=67.52 E-value=0.42 Score=24.32 Aligned_cols=48 Identities=19% Similarity=0.084 Sum_probs=28.0
Q ss_pred CHHCCCCCCCCHHHHCCCCCCC------CCCCEE----E-EEHHHCCCCCH-HHHHHHHHHC
Q ss_conf 7220897997526747774311------467447----9-94013025771-5878742002
Q gi|254780416|r 6 TENCILCKHTDCVEVCPVDCFY------EGENFL----A-IHPDECIDCGV-CEPECPVDAI 55 (113)
Q Consensus 6 ~~~C~~C~~~~Cv~~CP~~ai~------~~~~~~----~-id~~~Ci~Cg~-C~~~CP~~AI 55 (113)
.+.|++| +.|.+.||..... .+.... . -+-..|+.|+. |.-.||..-.
T Consensus 350 ~ESCgqC--~pCr~G~p~~l~~il~~i~~g~~~~~dl~~l~~l~~~i~~~s~C~~~~~a~~p 409 (438)
T 3i9v_1 350 HESCGKC--TPCREGVAGFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWP 409 (438)
T ss_dssp HHCCSCC--HHHHTTTTTHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTTCCSSTHHHHHHHH
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 7778999--58488869999999999996799989999999999761499826797788999
No 81
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=66.52 E-value=1.8 Score=20.96 Aligned_cols=51 Identities=25% Similarity=0.578 Sum_probs=30.9
Q ss_pred CHHCCCCCCCCHHHHCCCCCC--------CCCC--CEEEEE------H----HHCCCCCHHHHHHHHHHCC
Q ss_conf 722089799752674777431--------1467--447994------0----1302577158787420025
Q gi|254780416|r 6 TENCILCKHTDCVEVCPVDCF--------YEGE--NFLAIH------P----DECIDCGVCEPECPVDAIK 56 (113)
Q Consensus 6 ~~~C~~C~~~~Cv~~CP~~ai--------~~~~--~~~~id------~----~~Ci~Cg~C~~~CP~~AI~ 56 (113)
..+|++|....|...||++.- ..++ +-+.+. | -.|.....|+.+|..+...
T Consensus 19 a~rC~~c~~~pC~~~CP~~~di~~~i~~i~~g~~~~A~~~i~~~np~p~~~grvCp~~~~Ce~~C~~~~~~ 89 (456)
T 2vdc_G 19 ANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQST 89 (456)
T ss_dssp HHHSCCCSSCHHHHTSTTCCCHHHHHHHHHHTCHHHHHHHHHHHCSCHHHHHHHCCGGGSGGGGCGGGGSS
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCCCC
T ss_conf 98850799985233699989488999998779999999999875880455404489956168758488888
No 82
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=30.19 E-value=6.1 Score=18.06 Aligned_cols=22 Identities=32% Similarity=0.908 Sum_probs=12.1
Q ss_pred HCCCCC----CCCHHHHCCCCCCCCC
Q ss_conf 208979----9752674777431146
Q gi|254780416|r 8 NCILCK----HTDCVEVCPVDCFYEG 29 (113)
Q Consensus 8 ~C~~C~----~~~Cv~~CP~~ai~~~ 29 (113)
.|+.|+ .+.|+..||.+-++..
T Consensus 224 ~C~sC~~~~~~g~Cv~~CP~g~y~~~ 249 (486)
T 2hr7_A 224 KCVACRNFYLDGRCVETCPPPYYHFQ 249 (486)
T ss_dssp SBSSBSSEEETTEEESSCCTTCEEET
T ss_pred CCCCCCCCCCCCEECCCCCCCEEECC
T ss_conf 68788896879517576999803147
Done!