BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780416|ref|YP_003064829.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62] (113 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780416|ref|YP_003064829.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040093|gb|ACT56889.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62] Length = 113 Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT Sbjct: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 >gi|315122140|ref|YP_004062629.1| putative ferredoxin protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495542|gb|ADR52141.1| putative ferredoxin protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 112 Score = 202 bits (515), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 96/113 (84%), Positives = 106/113 (93%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCILCKHTDCVEVCPVDCFYEGENFL IHP+ECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTFVVTENCILCKHTDCVEVCPVDCFYEGENFLVIHPEECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PGLE+WL+INS+Y++QWPNITTKK SLP+AA+MDGV+ KYE YFSP P KNT Sbjct: 61 PGLEMWLQINSKYSSQWPNITTKKASLPNAAEMDGVENKYENYFSPKP-AKNT 112 >gi|15967011|ref|NP_387364.1| putative ferredoxin protein [Sinorhizobium meliloti 1021] gi|307302479|ref|ZP_07582236.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti BL225C] gi|307316191|ref|ZP_07595635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti AK83] gi|15076284|emb|CAC47837.1| Putative ferredoxin protein [Sinorhizobium meliloti 1021] gi|306898031|gb|EFN28773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti AK83] gi|306903149|gb|EFN33739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti BL225C] Length = 112 Score = 189 bits (481), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 86/109 (78%), Positives = 99/109 (90%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL++WLK+N+E++TQWPNIT K++ LP A +MDGV++KYEKYFS PG Sbjct: 61 PGLDMWLKLNAEFSTQWPNITVKRDPLPEAKEMDGVEEKYEKYFSSEPG 109 >gi|150398307|ref|YP_001328774.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150029822|gb|ABR61939.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 112 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 85/109 (77%), Positives = 99/109 (90%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL++WLK+N++++TQWPNIT K++ LP A +MDG++ KYEKYFSP PG Sbjct: 61 PGLDMWLKLNADFSTQWPNITVKRDPLPEATEMDGLEGKYEKYFSPEPG 109 >gi|227823779|ref|YP_002827752.1| putative ferredoxin protein [Sinorhizobium fredii NGR234] gi|227342781|gb|ACP26999.1| putative ferredoxin protein [Sinorhizobium fredii NGR234] Length = 112 Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 85/109 (77%), Positives = 98/109 (89%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL++WLK+N+++ATQWPNIT K++ LP A +MDGV+ KYE+YFS PG Sbjct: 61 PGLDMWLKLNADFATQWPNITVKRDPLPEAKEMDGVEGKYEQYFSEKPG 109 >gi|241206828|ref|YP_002977924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860718|gb|ACS58385.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 112 Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 88/112 (78%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KKE LP A MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKEPLPEAKDMDGETGKFEKYFSEKPGSGD 112 >gi|222087731|ref|YP_002546268.1| ferredoxin III protein [Agrobacterium radiobacter K84] gi|221725179|gb|ACM28335.1| ferredoxin III protein [Agrobacterium radiobacter K84] Length = 116 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 83/112 (74%), Positives = 98/112 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NC+ CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 5 MTYVVTDNCVRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN++YA WPNIT K+++LP A ++DG + K+EKYFS NPG + Sbjct: 65 PGLDKWLKINADYAAIWPNITVKRDALPEAKELDGEEGKFEKYFSANPGAGD 116 >gi|319409357|emb|CBI83001.1| ferredoxin II [Bartonella schoenbuchensis R1] Length = 112 Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 85/110 (77%), Positives = 94/110 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N EYAT+WPN+TT+K LP A +MDGV K EKYFS NPG Sbjct: 61 PGLETWLELNREYATKWPNLTTQKSPLPQAKEMDGVPNKLEKYFSENPGS 110 >gi|209551386|ref|YP_002283303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537142|gb|ACI57077.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 112 Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 87/112 (77%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KK+ LP A +MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKDPLPEAKEMDGETGKFEKYFSEKPGSGD 112 >gi|222150213|ref|YP_002551170.1| ferredoxin [Agrobacterium vitis S4] gi|221737195|gb|ACM38158.1| ferredoxin [Agrobacterium vitis S4] Length = 116 Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 98/109 (89%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 5 MTYIVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL+ WLKIN+E+A WPNITTK+++LP A +MDGV+ K+E YFS PG Sbjct: 65 PGLDKWLKINAEFAQVWPNITTKRDALPEAKEMDGVEGKFELYFSEKPG 113 >gi|116254342|ref|YP_770180.1| ferredoxin II (FdII) [Rhizobium leguminosarum bv. viciae 3841] gi|115258990|emb|CAK10099.1| putative ferredoxin II (FdII) [Rhizobium leguminosarum bv. viciae 3841] Length = 112 Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 87/112 (77%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KK+ LP A MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKDPLPEAKDMDGETGKFEKYFSEKPGSGD 112 >gi|27375268|ref|NP_766797.1| ferredoxin [Bradyrhizobium japonicum USDA 110] gi|27348404|dbj|BAC45422.1| ferredoxin [Bradyrhizobium japonicum USDA 110] Length = 112 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 85/112 (75%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N++YA WPNIT KKES A + DG++ K+EKYFSPNPG + Sbjct: 61 PGLEKWLSVNADYAKSWPNITQKKESPADAKEFDGMEGKFEKYFSPNPGSGD 112 >gi|86359603|ref|YP_471495.1| ferredoxin III protein [Rhizobium etli CFN 42] gi|190893876|ref|YP_001980418.1| ferredoxin III protein [Rhizobium etli CIAT 652] gi|86283705|gb|ABC92768.1| ferredoxin III protein [Rhizobium etli CFN 42] gi|190699155|gb|ACE93240.1| ferredoxin III protein [Rhizobium etli CIAT 652] Length = 112 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 86/112 (76%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYA+ WPNIT KK+ LP A +MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYASIWPNITVKKDPLPEAKEMDGQTGKFEKYFSEKPGSGD 112 >gi|121602702|ref|YP_988462.1| ferredoxin [Bartonella bacilliformis KC583] gi|120614879|gb|ABM45480.1| ferredoxin [Bartonella bacilliformis KC583] Length = 112 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/110 (76%), Positives = 95/110 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YAT+WPN++T+K LP A +MDG+ K EKYFS NPGG Sbjct: 61 PGLEQWLELNLNYATKWPNLSTQKPPLPEAKEMDGIPNKLEKYFSENPGG 110 >gi|254473211|ref|ZP_05086609.1| ferredoxin II [Pseudovibrio sp. JE062] gi|211957932|gb|EEA93134.1| ferredoxin II [Pseudovibrio sp. JE062] Length = 112 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 95/109 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE W+++N+EYA +WPN+T KK+ LP AA+ DGVK+K EKYFS PG Sbjct: 61 PGLEKWVELNAEYAEKWPNLTVKKDQLPEAAEFDGVKEKLEKYFSEKPG 109 >gi|49474701|ref|YP_032743.1| ferredoxin II [Bartonella quintana str. Toulouse] gi|6984158|gb|AAF34779.1|AF228062_1 ferredoxin II [Bartonella quintana] gi|49240205|emb|CAF26673.1| Ferredoxin II [Bartonella quintana str. Toulouse] Length = 112 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 83/110 (75%), Positives = 94/110 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVITDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YAT+WPN+TT+K+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYATKWPNLTTRKDPLPQAKEMDGVANKLEKYFSENPGS 110 >gi|319407755|emb|CBI81402.1| ferredoxin II [Bartonella sp. 1-1C] Length = 112 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 83/110 (75%), Positives = 93/110 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+ TKK+ LP A +MDG+ K EKYFS NPG Sbjct: 61 PGLEKWLELNLRYAKKWPNLMTKKDPLPQAKEMDGIPNKLEKYFSENPGN 110 >gi|49476178|ref|YP_034219.1| ferredoxin II [Bartonella henselae str. Houston-1] gi|49238986|emb|CAF28286.1| Ferredoxin II [Bartonella henselae str. Houston-1] Length = 112 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 82/110 (74%), Positives = 94/110 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N +YA +WPN+TT+K+ LP A +MDG+ K EKYFS NPG Sbjct: 61 PGLEKWLELNLQYANKWPNLTTRKDPLPQAKEMDGIPDKLEKYFSENPGS 110 >gi|159185361|ref|NP_355681.2| ferredoxin [Agrobacterium tumefaciens str. C58] gi|159140612|gb|AAK88466.2| ferredoxin [Agrobacterium tumefaciens str. C58] Length = 112 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 95/109 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL+ WLKIN+EYA WPNIT K++ +P A +MDGV+ K E YFS PG Sbjct: 61 PGLDKWLKINTEYAAIWPNITIKRDPMPEAKEMDGVEGKLELYFSAEPG 109 >gi|86747676|ref|YP_484172.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86570704|gb|ABD05261.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 112 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 93/109 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++NSEYA WPN+T KK+S A DGV+ K+EK+FSP PG Sbjct: 61 PGLEKWLELNSEYAKTWPNLTQKKDSPDDAKTFDGVEGKFEKFFSPEPG 109 >gi|325294121|ref|YP_004279985.1| Ferredoxin [Agrobacterium sp. H13-3] gi|325061974|gb|ADY65665.1| Ferredoxin [Agrobacterium sp. H13-3] Length = 112 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 94/109 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL+ WLK+N+EYA WPNIT K++ LP A +MDGV K E YFS PG Sbjct: 61 PGLDKWLKLNTEYAAIWPNITIKRDPLPEAKEMDGVTGKLELYFSAEPG 109 >gi|153008467|ref|YP_001369682.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|239832850|ref|ZP_04681179.1| Ferredoxin-2 [Ochrobactrum intermedium LMG 3301] gi|151560355|gb|ABS13853.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ochrobactrum anthropi ATCC 49188] gi|239825117|gb|EEQ96685.1| Ferredoxin-2 [Ochrobactrum intermedium LMG 3301] Length = 112 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 82/112 (73%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K EKYFS PG + Sbjct: 61 PGLDKWLELNTEYAAKWPNITAKKDALPEAKEMDGVAGKLEKYFSAEPGSGD 112 >gi|225628328|ref|ZP_03786362.1| Ferredoxin-2 [Brucella ceti str. Cudo] gi|225616174|gb|EEH13222.1| Ferredoxin-2 [Brucella ceti str. Cudo] Length = 138 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 27 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 86 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 87 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLEQYFSPEAGSGD 138 >gi|256061798|ref|ZP_05451933.1| Ferredoxin-2 [Brucella neotomae 5K33] gi|261325800|ref|ZP_05964997.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella neotomae 5K33] gi|261301780|gb|EEY05277.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella neotomae 5K33] Length = 112 Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLERYFSPEAGSGD 112 >gi|319406280|emb|CBI79917.1| ferredoxin II [Bartonella sp. AR 15-3] Length = 112 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 83/110 (75%), Positives = 92/110 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+ TKK+ LP A +MDGV K E YFS NPG Sbjct: 61 PGLEKWLELNLNYANKWPNLMTKKDPLPQAKEMDGVLNKLETYFSENPGS 110 >gi|17986561|ref|NP_539195.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|23502624|ref|NP_698751.1| ferredoxin A [Brucella suis 1330] gi|62290637|ref|YP_222430.1| FdxA, ferredoxin A [Brucella abortus bv. 1 str. 9-941] gi|82700551|ref|YP_415125.1| 7Fe ferredoxin [Brucella melitensis biovar Abortus 2308] gi|148559196|ref|YP_001259611.1| ferredoxin A [Brucella ovis ATCC 25840] gi|161619692|ref|YP_001593579.1| ferredoxin-2 [Brucella canis ATCC 23365] gi|163845344|ref|YP_001622999.1| hypothetical protein BSUIS_B1243 [Brucella suis ATCC 23445] gi|189024849|ref|YP_001935617.1| 7Fe ferredoxin [Brucella abortus S19] gi|225853217|ref|YP_002733450.1| ferredoxin-2 [Brucella melitensis ATCC 23457] gi|237816138|ref|ZP_04595133.1| Ferredoxin-2 [Brucella abortus str. 2308 A] gi|254689926|ref|ZP_05153180.1| Ferredoxin-2 [Brucella abortus bv. 6 str. 870] gi|254694418|ref|ZP_05156246.1| Ferredoxin-2 [Brucella abortus bv. 3 str. Tulya] gi|254698077|ref|ZP_05159905.1| Ferredoxin-2 [Brucella abortus bv. 2 str. 86/8/59] gi|254700419|ref|ZP_05162247.1| Ferredoxin-2 [Brucella suis bv. 5 str. 513] gi|254703538|ref|ZP_05165366.1| Ferredoxin-2 [Brucella suis bv. 3 str. 686] gi|254708374|ref|ZP_05170202.1| Ferredoxin-2 [Brucella pinnipedialis M163/99/10] gi|254708773|ref|ZP_05170584.1| Ferredoxin-2 [Brucella pinnipedialis B2/94] gi|254719760|ref|ZP_05181571.1| Ferredoxin-2 [Brucella sp. 83/13] gi|254730961|ref|ZP_05189539.1| Ferredoxin-2 [Brucella abortus bv. 4 str. 292] gi|256030299|ref|ZP_05443913.1| Ferredoxin-2 [Brucella pinnipedialis M292/94/1] gi|256045368|ref|ZP_05448262.1| Ferredoxin-2 [Brucella melitensis bv. 1 str. Rev.1] gi|256114332|ref|ZP_05455070.1| Ferredoxin-2 [Brucella melitensis bv. 3 str. Ether] gi|256160472|ref|ZP_05458161.1| Ferredoxin-2 [Brucella ceti M490/95/1] gi|256255679|ref|ZP_05461215.1| Ferredoxin-2 [Brucella ceti B1/94] gi|256258181|ref|ZP_05463717.1| Ferredoxin-2 [Brucella abortus bv. 9 str. C68] gi|256263294|ref|ZP_05465826.1| 7Fe ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|256370173|ref|YP_003107684.1| ferredoxin A [Brucella microti CCM 4915] gi|260167973|ref|ZP_05754784.1| ferredoxin A [Brucella sp. F5/99] gi|260547125|ref|ZP_05822863.1| 7Fe ferredoxin [Brucella abortus NCTC 8038] gi|260565738|ref|ZP_05836221.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|260568844|ref|ZP_05839312.1| ferredoxin II [Brucella suis bv. 4 str. 40] gi|260755461|ref|ZP_05867809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758683|ref|ZP_05871031.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260762518|ref|ZP_05874855.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884479|ref|ZP_05896093.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261214732|ref|ZP_05929013.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261222885|ref|ZP_05937166.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti B1/94] gi|261315873|ref|ZP_05955070.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261316266|ref|ZP_05955463.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis B2/94] gi|261750917|ref|ZP_05994626.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 5 str. 513] gi|261754171|ref|ZP_05997880.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 3 str. 686] gi|261757415|ref|ZP_06001124.1| 7Fe ferredoxin [Brucella sp. F5/99] gi|265984779|ref|ZP_06097514.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella sp. 83/13] gi|265987330|ref|ZP_06099887.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265991796|ref|ZP_06104353.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995636|ref|ZP_06108193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265998844|ref|ZP_06111401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M490/95/1] gi|294851011|ref|ZP_06791687.1| ferredoxin [Brucella sp. NVSL 07-0026] gi|297249031|ref|ZP_06932739.1| ferredoxin-2 [Brucella abortus bv. 5 str. B3196] gi|306839456|ref|ZP_07472264.1| Ferredoxin-2 [Brucella sp. NF 2653] gi|306841481|ref|ZP_07474181.1| Ferredoxin-2 [Brucella sp. BO2] gi|306844752|ref|ZP_07477337.1| Ferredoxin-2 [Brucella sp. BO1] gi|17982169|gb|AAL51459.1| ferredoxin ii [Brucella melitensis bv. 1 str. 16M] gi|23348629|gb|AAN30666.1| ferredoxin A [Brucella suis 1330] gi|62196769|gb|AAX75069.1| FdxA, ferredoxin A [Brucella abortus bv. 1 str. 9-941] gi|82616652|emb|CAJ11734.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Brucella melitensis biovar Abortus 2308] gi|148370453|gb|ABQ60432.1| ferredoxin A [Brucella ovis ATCC 25840] gi|161336503|gb|ABX62808.1| Ferredoxin-2 [Brucella canis ATCC 23365] gi|163676067|gb|ABY40177.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189020421|gb|ACD73143.1| 7Fe ferredoxin [Brucella abortus S19] gi|225641582|gb|ACO01496.1| Ferredoxin-2 [Brucella melitensis ATCC 23457] gi|237788600|gb|EEP62813.1| Ferredoxin-2 [Brucella abortus str. 2308 A] gi|256000336|gb|ACU48735.1| ferredoxin A [Brucella microti CCM 4915] gi|260095490|gb|EEW79368.1| 7Fe ferredoxin [Brucella abortus NCTC 8038] gi|260151111|gb|EEW86206.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|260154228|gb|EEW89310.1| ferredoxin II [Brucella suis bv. 4 str. 40] gi|260669001|gb|EEX55941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672944|gb|EEX59765.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675569|gb|EEX62390.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260874007|gb|EEX81076.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260916339|gb|EEX83200.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260921469|gb|EEX88122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti B1/94] gi|261295489|gb|EEX98985.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis B2/94] gi|261304899|gb|EEY08396.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261737399|gb|EEY25395.1| 7Fe ferredoxin [Brucella sp. F5/99] gi|261740670|gb|EEY28596.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 5 str. 513] gi|261743924|gb|EEY31850.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 3 str. 686] gi|262553533|gb|EEZ09302.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M490/95/1] gi|262766920|gb|EEZ12538.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002752|gb|EEZ15155.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093261|gb|EEZ17358.1| 7Fe ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|264659527|gb|EEZ29788.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M292/94/1] gi|264663371|gb|EEZ33632.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella sp. 83/13] gi|294821654|gb|EFG38650.1| ferredoxin [Brucella sp. NVSL 07-0026] gi|297174164|gb|EFH33521.1| ferredoxin-2 [Brucella abortus bv. 5 str. B3196] gi|306274924|gb|EFM56694.1| Ferredoxin-2 [Brucella sp. BO1] gi|306288445|gb|EFM59801.1| Ferredoxin-2 [Brucella sp. BO2] gi|306405401|gb|EFM61672.1| Ferredoxin-2 [Brucella sp. NF 2653] gi|326409774|gb|ADZ66839.1| 7Fe ferredoxin [Brucella melitensis M28] gi|326539491|gb|ADZ87706.1| ferredoxin-2 [Brucella melitensis M5-90] Length = 112 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLEQYFSPEAGSGD 112 >gi|319899400|ref|YP_004159497.1| ferredoxin II [Bartonella clarridgeiae 73] gi|319403368|emb|CBI76927.1| ferredoxin II [Bartonella clarridgeiae 73] Length = 112 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 82/110 (74%), Positives = 92/110 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYIVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+ TKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLNYANKWPNLMTKKDPLPQAKEMDGVPDKLEKYFSENPGS 110 >gi|110635706|ref|YP_675914.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110286690|gb|ABG64749.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 138 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 93/109 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 27 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 86 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N++YA +WPNIT KKE A DG+++K+EKYFSP PG Sbjct: 87 PGLEKWLQVNADYAEKWPNITAKKEPPADAKDWDGIEEKFEKYFSPEPG 135 >gi|118591278|ref|ZP_01548676.1| ferredoxin III protein [Stappia aggregata IAM 12614] gi|118435950|gb|EAV42593.1| ferredoxin III protein [Stappia aggregata IAM 12614] Length = 110 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 81/110 (73%), Positives = 95/110 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE W++IN+EY+ +WPNIT KK+ LP A + DG + K+EK+FSPNP Sbjct: 61 PGLEKWIEINAEYSEKWPNITEKKDPLPDAEEFDGKENKFEKFFSPNPAS 110 >gi|91974761|ref|YP_567420.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] gi|91681217|gb|ABE37519.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] Length = 112 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 81/109 (74%), Positives = 94/109 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N+EYA WPN+T KKE+ A + +G++ K+EK+FSP PG Sbjct: 61 PGLEKWLELNTEYAKSWPNLTQKKEAPGDAKQYEGMEGKFEKFFSPEPG 109 >gi|85713776|ref|ZP_01044766.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gi|85699680|gb|EAQ37547.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 112 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 81/109 (74%), Positives = 93/109 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N+EYA WPNIT KKE+ P A + +G + K+EKYFSPNPG Sbjct: 61 PGLEKWLEVNAEYAKSWPNITQKKEAPPDAKEFEGQEGKFEKYFSPNPG 109 >gi|254502406|ref|ZP_05114557.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222438477|gb|EEE45156.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 110 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 82/108 (75%), Positives = 94/108 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 PGLE W++IN+EY+ +WPNIT KK+ +P A K DG + K EKYFSPNP Sbjct: 61 PGLEKWIEINAEYSEKWPNITEKKDPMPDADKFDGQENKLEKYFSPNP 108 >gi|328542019|ref|YP_004302128.1| Ferredoxin II [polymorphum gilvum SL003B-26A1] gi|326411769|gb|ADZ68832.1| Ferredoxin II [Polymorphum gilvum SL003B-26A1] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 84/112 (75%), Positives = 96/112 (85%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN-PGGK 111 PGLE W++IN+EYA +WPNIT KK+ LP AA+ DG K+E+YFSPN P GK Sbjct: 61 PGLEKWIEINAEYAAKWPNITVKKDPLPEAAEFDGKAGKFEQYFSPNGPDGK 112 >gi|115522155|ref|YP_779066.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516102|gb|ABJ04086.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodopseudomonas palustris BisA53] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N+E+A WPNIT KK++ A DG + K++KYFS PG + Sbjct: 61 PGLEQWLSLNAEHAKSWPNITQKKDAPADAKSFDGAEGKFDKYFSAEPGSGD 112 >gi|319404795|emb|CBI78396.1| ferredoxin II [Bartonella rochalimae ATCC BAA-1498] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 82/110 (74%), Positives = 92/110 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+ TKK+ LP A +MDG+ K EK FS NPG Sbjct: 61 PGLEKWLELNLRYAKKWPNLMTKKDPLPQAKEMDGIPNKLEKCFSENPGN 110 >gi|148258714|ref|YP_001243299.1| ferredoxin II [Bradyrhizobium sp. BTAi1] gi|146410887|gb|ABQ39393.1| ferredoxin II [Bradyrhizobium sp. BTAi1] Length = 112 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/112 (74%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N+EYA WPNIT KK+ A + DG K+EKYFSP PG + Sbjct: 61 PGLEKWLGVNAEYAKAWPNITQKKDPPGDAKEHDGEAGKFEKYFSPKPGAGD 112 >gi|254714616|ref|ZP_05176427.1| Ferredoxin-2 [Brucella ceti M644/93/1] gi|254717514|ref|ZP_05179325.1| Ferredoxin-2 [Brucella ceti M13/05/1] gi|261219349|ref|ZP_05933630.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M13/05/1] gi|261322410|ref|ZP_05961607.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M644/93/1] gi|260924438|gb|EEX91006.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M13/05/1] gi|261295100|gb|EEX98596.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M644/93/1] Length = 112 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 80/112 (71%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++L A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALLEAKEMDGVAGKLEQYFSPEAGSGD 112 >gi|240851256|ref|YP_002972659.1| ferredoxin II [Bartonella grahamii as4aup] gi|240268379|gb|ACS51967.1| ferredoxin II [Bartonella grahamii as4aup] Length = 113 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 82/110 (74%), Positives = 92/110 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PDTE Sbjct: 1 MTHVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+TTKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYANKWPNLTTKKDPLPQAKEMDGVPNKLEKYFSENPGS 110 >gi|163869172|ref|YP_001610424.1| ferredoxin II [Bartonella tribocorum CIP 105476] gi|161018871|emb|CAK02429.1| ferredoxin II [Bartonella tribocorum CIP 105476] Length = 113 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 82/110 (74%), Positives = 92/110 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PDTE Sbjct: 1 MTHVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIVPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YA +WPN+TTKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYANKWPNLTTKKDPLPQAKEMDGVPNKLEKYFSENPGS 110 >gi|297180169|gb|ADI16391.1| ferredoxin [uncultured bacterium HF130_12L15] Length = 112 Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 81/109 (74%), Positives = 91/109 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N+EYA +WPNIT KKE A + DGV+ K+EKYFS G Sbjct: 61 PGLEKWLQVNTEYADKWPNITAKKEPPADAKEFDGVEGKFEKYFSAEAG 109 >gi|39933566|ref|NP_945842.1| ferredoxin II [Rhodopseudomonas palustris CGA009] gi|192288920|ref|YP_001989525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodopseudomonas palustris TIE-1] gi|39647412|emb|CAE25933.1| ferredoxin II [Rhodopseudomonas palustris CGA009] gi|192282669|gb|ACE99049.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodopseudomonas palustris TIE-1] Length = 112 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++NSEYA WPN+T KK++ A + DG K+EKYFS PG + Sbjct: 61 PGLEKWLELNSEYAKTWPNLTQKKDAPADAKEFDGQAGKFEKYFSSEPGSGD 112 >gi|294678312|ref|YP_003578927.1| ferredoxin II [Rhodobacter capsulatus SB 1003] gi|119953|sp|P18082|FER2_RHOCA RecName: Full=Ferredoxin-2; AltName: Full=Ferredoxin II; Short=FdII gi|46012|emb|CAA37388.1| unnamed protein product [Rhodobacter capsulatus] gi|151914|gb|AAA26108.1| ferredoxin II [Rhodobacter capsulatus SB 1003] gi|294477132|gb|ADE86520.1| ferredoxin II [Rhodobacter capsulatus SB 1003] Length = 112 Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 81/109 (74%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E W++ N YA+QWP IT KK+ +P K DG K EKYFSPNPG Sbjct: 61 PGMEDWVEFNRTYASQWPVITIKKDPMPDHKKYDGETGKREKYFSPNPG 109 >gi|220921711|ref|YP_002497012.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946317|gb|ACL56709.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 112 Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 82/112 (73%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WLK+N++ A WPNIT KK + A + DGV KYE +FSPNPG + Sbjct: 61 PGLEKWLKLNADLAKSWPNITQKKPAPADAKEWDGVAGKYEAHFSPNPGSGD 112 >gi|114706527|ref|ZP_01439428.1| ferredoxin II [Fulvimarina pelagi HTCC2506] gi|114537919|gb|EAU41042.1| ferredoxin II [Fulvimarina pelagi HTCC2506] Length = 112 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 82/112 (73%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYLVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYA +WPNIT KE A K DG + K+EKYFS PG + Sbjct: 61 PGLDHWLKINTEYAEKWPNITIAKEKPEDAEKYDGEEGKFEKYFSAEPGSGD 112 >gi|75674609|ref|YP_317030.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gi|74419479|gb|ABA03678.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 112 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 79/109 (72%), Positives = 93/109 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E WL++N+EYA +WPNIT KKE+ P A +G + K+EKYFSP+PG Sbjct: 61 PGVEKWLEVNAEYAGRWPNITQKKETPPDAKDFEGQEGKFEKYFSPDPG 109 >gi|13473302|ref|NP_104869.1| ferredoxin II [Mesorhizobium loti MAFF303099] gi|14024050|dbj|BAB50655.1| ferredoxin II [Mesorhizobium loti MAFF303099] Length = 112 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 81/109 (74%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL+ WL+IN+EYA +WPNIT KKE A DG K+EKYFS PG Sbjct: 61 PGLDKWLQINTEYAEKWPNITAKKEPPADAKTFDGEAGKFEKYFSAEPG 109 >gi|307943599|ref|ZP_07658943.1| ferredoxin-1 [Roseibium sp. TrichSKD4] gi|307773229|gb|EFO32446.1| ferredoxin-1 [Roseibium sp. TrichSKD4] Length = 114 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 80/107 (74%), Positives = 92/107 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 5 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 PGLE W+++N+EY+ +WPNIT KK+ LP A + DG K K EKYFSPN Sbjct: 65 PGLEKWIELNAEYSEKWPNITEKKDELPEAKEFDGKKDKLEKYFSPN 111 >gi|92116127|ref|YP_575856.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91799021|gb|ABE61396.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 112 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 78/109 (71%), Positives = 93/109 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N++YA WPN+T KK++ P A + +G + K+EKYFSPNPG Sbjct: 61 PGLEKWLELNADYAKSWPNLTQKKDAPPDAKEFEGQEGKFEKYFSPNPG 109 >gi|319781059|ref|YP_004140535.1| ferredoxin II [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166947|gb|ADV10485.1| ferredoxin II [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 112 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL+ WL++N+EYA +WPNIT KKE A DG K+EKYFS PG Sbjct: 61 PGLDKWLQVNTEYAEKWPNITAKKEPPADAKSFDGEAGKFEKYFSAEPG 109 >gi|300024664|ref|YP_003757275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526485|gb|ADJ24954.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 112 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 80/112 (71%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV E CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVNEKCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E WL++N +YA WPNIT KK +LP A + K+EKYFSPN G + Sbjct: 61 PGMERWLELNRQYADNWPNITAKKAALPDADDIKDEPGKFEKYFSPNAGSGD 112 >gi|304394151|ref|ZP_07376074.1| ferredoxin [Ahrensia sp. R2A130] gi|303293591|gb|EFL87968.1| ferredoxin [Ahrensia sp. R2A130] Length = 112 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 81/112 (72%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYLVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLK+N+E+A +WPNI K E A K DG K K+EKYFS PG N Sbjct: 61 PGLDNWLKVNTEFAEKWPNIIAKGEQPGDAEKFDGEKGKFEKYFSAEPGEGN 112 >gi|209883218|ref|YP_002287075.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] gi|209871414|gb|ACI91210.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] Length = 112 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P LE WL +N+EYA WPNIT KK+ A + DG + K+++YFSPNPG Sbjct: 61 PDLEKWLGVNAEYAKTWPNITQKKDPPDDAKEFDGAEGKFDQYFSPNPG 109 >gi|316931530|ref|YP_004106512.1| ferredoxin [Rhodopseudomonas palustris DX-1] gi|315599244|gb|ADU41779.1| ferredoxin [Rhodopseudomonas palustris DX-1] Length = 112 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/112 (70%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+E+A WPN+T KK++ A + DG K++KYFS PG + Sbjct: 61 PGLEKWLELNAEHAKTWPNLTQKKDAPADAKEFDGQAGKFDKYFSSEPGSGD 112 >gi|163759999|ref|ZP_02167083.1| ferredoxin II [Hoeflea phototrophica DFL-43] gi|162282957|gb|EDQ33244.1| ferredoxin II [Hoeflea phototrophica DFL-43] Length = 112 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 78/109 (71%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E WL +N+EYA +WPNIT K+++ A DG + K+EKYFS PG Sbjct: 61 PGMEKWLVVNTEYADKWPNITVKRDAPDDAKDFDGTEGKFEKYFSAEPG 109 >gi|170742913|ref|YP_001771568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168197187|gb|ACA19134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 112 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 79/109 (72%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WLK+N+++A WPNIT KK + A + DGV K++ +FS NPG Sbjct: 61 PGLERWLKLNADFAKNWPNITQKKTAPSDAKEWDGVAGKFDAHFSSNPG 109 >gi|299132817|ref|ZP_07026012.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298592954|gb|EFI53154.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 112 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 79/109 (72%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 LE WL +N+EYA WPNIT KK++ A + DG + K++ YFSPNPG Sbjct: 61 ADLEKWLGVNAEYAKTWPNITQKKDAPADAKEFDGAEGKFDNYFSPNPG 109 >gi|260461458|ref|ZP_05809705.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] gi|259032528|gb|EEW33792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] Length = 112 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GL+ WL+IN+EYA +WPNIT KKE A DG K+EKYFS PG Sbjct: 61 SGLDKWLQINTEYAEKWPNITAKKEPPADAKTFDGEAGKFEKYFSAEPG 109 >gi|254512440|ref|ZP_05124507.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221536151|gb|EEE39139.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 112 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 79/109 (72%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E W++ N +Y+ QWP I TKK+ +P A + DG + K EKYFS PG Sbjct: 61 PGMEEWVEFNRKYSEQWPVIVTKKDPMPDAEERDGEEGKMEKYFSEAPG 109 >gi|90420289|ref|ZP_01228197.1| ferredoxin II [Aurantimonas manganoxydans SI85-9A1] gi|90335623|gb|EAS49373.1| ferredoxin II [Aurantimonas manganoxydans SI85-9A1] Length = 112 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 78/109 (71%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+ DCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYLVTDNCIRCKYMDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P L+ WLKIN+EYA +WPNIT K+++ A K DG K+EKYFS PG Sbjct: 61 PNLDKWLKINTEYAEKWPNITIKRDAPADAEKFDGEDGKFEKYFSAEPG 109 >gi|90422071|ref|YP_530441.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] gi|90104085|gb|ABD86122.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] Length = 112 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 78/109 (71%), Positives = 91/109 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTEACIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N+EY+ WPNIT KK++ A + + V+ K++KYFS PG Sbjct: 61 PGLEKWLEVNAEYSKTWPNITQKKDAPADAKEFESVEGKFDKYFSAEPG 109 >gi|298293647|ref|YP_003695586.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Starkeya novella DSM 506] gi|296930158|gb|ADH90967.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Starkeya novella DSM 506] Length = 111 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/112 (71%), Positives = 92/112 (82%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCV VCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVSVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL +N+EYA WPNIT +K+ LP A + DGV K + Y SP PG ++ Sbjct: 61 PGLDKWLSLNAEYAKVWPNITDRKDPLPDAKEWDGVPDKLQ-YLSPEPGKQD 111 >gi|56696303|ref|YP_166660.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56678040|gb|AAV94706.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 112 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 79/109 (72%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENALVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E W++ N +Y+ WP I TKK+ LP A + DG K EKYFS PG Sbjct: 61 PGMEQWVEFNRKYSEMWPVIVTKKDPLPEAEERDGESGKMEKYFSEAPG 109 >gi|260434065|ref|ZP_05788036.1| ferredoxin-1 [Silicibacter lacuscaerulensis ITI-1157] gi|260417893|gb|EEX11152.1| ferredoxin-1 [Silicibacter lacuscaerulensis ITI-1157] Length = 112 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E W++ N +YA WP I +KK+ LP A K DG + K EKYFS PG Sbjct: 61 PGMEQWVEFNRKYAEIWPVIVSKKDPLPDAEKHDGEEGKMEKYFSEAPG 109 >gi|170750106|ref|YP_001756366.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656628|gb|ACB25683.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 112 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 L+ WLK+N++YA WPNIT KKE+ A + DG K E +FSPNPG + Sbjct: 61 SNLDTWLKLNADYAKSWPNITQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD 112 >gi|163853279|ref|YP_001641322.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|218532095|ref|YP_002422911.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240140687|ref|YP_002965167.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methylobacterium extorquens AM1] gi|254563202|ref|YP_003070297.1| ferredoxin II [Methylobacterium extorquens DM4] gi|163664884|gb|ABY32251.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] gi|218524398|gb|ACK84983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240010664|gb|ACS41890.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methylobacterium extorquens AM1] gi|254270480|emb|CAX26480.1| ferredoxin II [Methylobacterium extorquens DM4] Length = 112 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WLK+N++YA WPNIT KK++ A + DGV K E +FSPNPG + Sbjct: 61 GDLESWLKLNADYAKTWPNITQKKDAPSDAKQWDGVSGKLEAHFSPNPGSGD 112 >gi|217977550|ref|YP_002361697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylocella silvestris BL2] gi|217502926|gb|ACK50335.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylocella silvestris BL2] Length = 112 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV ENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVLENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PG+E W+ +N++ A WPNIT K+E+ P A + DG K++++FSP PG Sbjct: 61 PGIEQWITLNADMAQSWPNITMKREAAPDAKQFDGRPGKFKEFFSPEPG 109 >gi|188583532|ref|YP_001926977.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|179347030|gb|ACB82442.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] Length = 112 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WLK+N++YA WPNIT KK++ A + DGV K E +FSPNPG + Sbjct: 61 GNLESWLKLNADYAKTWPNITQKKDAPTDAKQWDGVGGKLEAHFSPNPGSGD 112 >gi|119384563|ref|YP_915619.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Paracoccus denitrificans PD1222] gi|119374330|gb|ABL69923.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Paracoccus denitrificans PD1222] Length = 112 Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 77/109 (70%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI+CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIMCKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP IT KK+ +P +MDG K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYAESWPVITRKKDPMPGYQEMDGAPGKLEKYFSEAPG 109 >gi|159043337|ref|YP_001532131.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911097|gb|ABV92530.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dinoroseobacter shibae DFL 12] Length = 112 Score = 166 bits (421), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 77/109 (70%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEAWPVIITKKDQLPDAEERDGEQGKLEKYFSEAPG 109 >gi|85714492|ref|ZP_01045480.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gi|85698939|gb|EAQ36808.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 112 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 77/109 (70%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P LE WLK+N+EYA WPNIT K+++ A DGV K E+YFS NPG Sbjct: 61 PDLENWLKLNAEYAAVWPNITIKRDAPADAKTFDGVAGKLEQYFSANPG 109 >gi|158421856|ref|YP_001523148.1| ferredoxin II [Azorhizobium caulinodans ORS 571] gi|158328745|dbj|BAF86230.1| ferredoxin II [Azorhizobium caulinodans ORS 571] Length = 111 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 89/109 (81%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCILCK+TDCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTENCILCKYTDCVAVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL +N+EYA WPNIT K+++LP A + DG K +K FS PG Sbjct: 61 PGLEKWLSLNAEYAKTWPNITLKRDALPDAKEWDGKPGKEDK-FSAEPG 108 >gi|149916594|ref|ZP_01905108.1| ferredoxin II [Roseobacter sp. AzwK-3b] gi|149809521|gb|EDM69381.1| ferredoxin II [Roseobacter sp. AzwK-3b] Length = 112 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ +P A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQMPDAEERDGEEGKLEKYFSEKPG 109 >gi|92119089|ref|YP_578818.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801983|gb|ABE64358.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 133 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AI D+E Sbjct: 22 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIFADSE 81 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WLK+N+EYA WPNIT K+++ A DGV K E+YFS NPG Sbjct: 82 PGLENWLKLNAEYAAVWPNITIKRDAPADAKAFDGVADKLEQYFSANPG 130 >gi|75676994|ref|YP_319415.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gi|74421864|gb|ABA06063.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 112 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P LE WLK+N+EY+ WPNIT K+++ A DGV K E+YFS NPG Sbjct: 61 PDLENWLKLNAEYSAVWPNITIKRDAPADAKTFDGVAGKLEQYFSANPG 109 >gi|312112940|ref|YP_004010536.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311218069|gb|ADP69437.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 114 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 79/113 (69%), Positives = 88/113 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK TDCVEVCPVDCFYEG N L I PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYVVLDACIKCKFTDCVEVCPVDCFYEGANMLVISPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PGLE +L++N EYA WPNIT KK LP K +K+EKYFSP+PG ++ Sbjct: 61 PGLEKFLEVNREYAALWPNITVKKPPLPDYEKFQQEAEKFEKYFSPDPGEGDS 113 >gi|83308697|emb|CAJ01607.1| ferredoxin ii [Methylocapsa acidiphila] Length = 112 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 73/112 (65%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV ENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVVENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL+ WL++N + A WPN+T K+E++P A DG K++++FS PG + Sbjct: 61 RGLDKWLELNRDMAKAWPNVTVKREAMPDAKAFDGRPGKFDEFFSAEPGSGD 112 >gi|154252147|ref|YP_001412971.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156097|gb|ABS63314.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Parvibaculum lavamentivorans DS-1] Length = 112 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYIVTDACIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGLE WL++N+EYA++WPNIT K++ A GV K+E++FS PG Sbjct: 61 PGLEKWLELNTEYASKWPNITIKRDPPADADDWQGVSGKFEEHFSAEPG 109 >gi|146277598|ref|YP_001167757.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555839|gb|ABP70452.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 112 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MAYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E WL++N +YA WP I TKK+ LP AA +DG K +FS PG Sbjct: 61 PDMESWLELNRKYAEIWPVIVTKKDPLPEAADLDGQTGKLATHFSEKPG 109 >gi|110679119|ref|YP_682126.1| ferredoxin II [Roseobacter denitrificans OCh 114] gi|109455235|gb|ABG31440.1| ferredoxin II [Roseobacter denitrificans OCh 114] Length = 112 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP+A + DG K EKYFS NPG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPG 109 >gi|163736062|ref|ZP_02143485.1| ferredoxin II [Roseobacter litoralis Och 149] gi|161390658|gb|EDQ15004.1| ferredoxin II [Roseobacter litoralis Och 149] Length = 112 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCISCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP+A + DG K EKYFS NPG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPG 109 >gi|114764921|ref|ZP_01444094.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114542633|gb|EAU45657.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 112 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I +KK+ +P A + DG K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIISKKDPMPEAEERDGEPGKMEKYFSEAPG 109 >gi|254459551|ref|ZP_05072967.1| ferredoxin II [Rhodobacterales bacterium HTCC2083] gi|206676140|gb|EDZ40627.1| ferredoxin II [Rhodobacteraceae bacterium HTCC2083] Length = 112 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQLPDAEERDGEEGKLEKYFSEKPG 109 >gi|163738512|ref|ZP_02145927.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] gi|163743577|ref|ZP_02150954.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161383162|gb|EDQ07554.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161388433|gb|EDQ12787.1| ferredoxin-2 [Phaeobacter gallaeciensis BS107] Length = 112 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +Y+ WP I +KK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPLPEAEERDGEEGKLEKYFSEAPG 109 >gi|254475184|ref|ZP_05088570.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214029427|gb|EEB70262.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 112 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +Y+ WP I +KK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPLPDAEERDGEEGKLEKYFSEAPG 109 >gi|126729324|ref|ZP_01745138.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126710314|gb|EBA09366.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 112 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVIDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ +WP I TKK+ LP A + DG K KYFS PG Sbjct: 61 PDMEKWVEFNRKYSEEWPVIITKKDPLPEAEERDGETDKVTKYFSEKPG 109 >gi|86137858|ref|ZP_01056434.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85825450|gb|EAQ45649.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 112 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +Y+ WP I +KK+ +P A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPMPEAEERDGEEGKLEKYFSEAPG 109 >gi|77462982|ref|YP_352486.1| ferredoxin II [Rhodobacter sphaeroides 2.4.1] gi|126461856|ref|YP_001042970.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|221638838|ref|YP_002525100.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides KD131] gi|332557858|ref|ZP_08412180.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides WS8N] gi|77387400|gb|ABA78585.1| ferredoxin II [Rhodobacter sphaeroides 2.4.1] gi|126103520|gb|ABN76198.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17029] gi|221159619|gb|ACM00599.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides KD131] gi|332275570|gb|EGJ20885.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides WS8N] Length = 112 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W+++N +YA WP I TKK+ LP A +DG K +FS PG Sbjct: 61 PDMESWVELNRKYAEVWPVIVTKKDPLPEATDLDGQPGKLATHFSEKPG 109 >gi|83952972|ref|ZP_00961699.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83835634|gb|EAP74936.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 112 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A + DG + K KYFS G Sbjct: 61 PDMEEWVEFNRKYSEMWPVIITKKDQLPEAEERDGEEGKLAKYFSEKAG 109 >gi|254466025|ref|ZP_05079436.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodobacterales bacterium Y4I] gi|206686933|gb|EDZ47415.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodobacterales bacterium Y4I] Length = 112 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP I +KK+ LP + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYAELWPVIVSKKDPLPGYEERDGEEGKMEKYFSEAPG 109 >gi|83955683|ref|ZP_00964263.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] gi|83839977|gb|EAP79153.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] Length = 112 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A K DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEKRDGEEGKLEKYFSEAPG 109 >gi|149202303|ref|ZP_01879276.1| iron-sulfur cluster-binding protein [Roseovarius sp. TM1035] gi|149144401|gb|EDM32432.1| iron-sulfur cluster-binding protein [Roseovarius sp. TM1035] Length = 112 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 85/109 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +YA WP I TKK+ LP A + DG K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYAEMWPVIITKKDPLPEAEERDGEAGKLEKYFSEAPG 109 >gi|294012720|ref|YP_003546180.1| ferredoxin [Sphingobium japonicum UT26S] gi|292676050|dbj|BAI97568.1| ferredoxin [Sphingobium japonicum UT26S] Length = 112 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 90/110 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 GLE WL++N++++ +WPNIT K E+ A M G++ K+E++FSP PG Sbjct: 61 NGLEKWLELNTKFSAEWPNITVKGEAPADADDMKGIENKFEQFFSPEPGA 110 >gi|84500894|ref|ZP_00999129.1| iron-sulfur cluster-binding protein [Oceanicola batsensis HTCC2597] gi|84390961|gb|EAQ03379.1| iron-sulfur cluster-binding protein [Oceanicola batsensis HTCC2597] Length = 112 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 85/109 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E W++ N +Y+ WP I T+K+ LP A + DG K EKYFS PG Sbjct: 61 PDTEKWVEFNRKYSEMWPVIITRKDPLPEAEERDGETGKLEKYFSEKPG 109 >gi|260576850|ref|ZP_05844833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259020887|gb|EEW24200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 112 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 83/109 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVIDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP I TKK+ LP A DG K YFS PG Sbjct: 61 PDMDTWVEFNRKYAEMWPVIVTKKDMLPDAEARDGETNKLATYFSEKPG 109 >gi|254486267|ref|ZP_05099472.1| ferredoxin II [Roseobacter sp. GAI101] gi|214043136|gb|EEB83774.1| ferredoxin II [Roseobacter sp. GAI101] Length = 112 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEERDGEEGKLEKYFSEAPG 109 >gi|307294531|ref|ZP_07574373.1| ferredoxin [Sphingobium chlorophenolicum L-1] gi|306879005|gb|EFN10223.1| ferredoxin [Sphingobium chlorophenolicum L-1] Length = 112 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 90/110 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 GLE WL++N++++ +WPNIT K ++ A M GV+ K+E++FSP PG Sbjct: 61 NGLEKWLELNTKFSAEWPNITVKGDAPADADDMKGVENKFEQFFSPEPGA 110 >gi|103488218|ref|YP_617779.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] gi|98978295|gb|ABF54446.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] Length = 112 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 90/109 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACVRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++NS+++ +WPNIT KKE+ A + GV+ K+EK+FSP PG Sbjct: 61 SGLEKWLEVNSKFSAEWPNITVKKETPADADEYKGVEGKFEKFFSPEPG 109 >gi|99080416|ref|YP_612570.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036696|gb|ABF63308.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 112 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDQWVEFNRKYAELWPVIVSKKDPMPGHEERDGEEGKLEKYFSEAPG 109 >gi|85707560|ref|ZP_01038630.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85667917|gb|EAQ22808.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 112 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 85/109 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +YA WP I TKK+ LP A + DG K +KYFS PG Sbjct: 61 PDMEKWVEFNRKYAEMWPVIITKKDPLPEAEERDGEAGKLDKYFSEAPG 109 >gi|259417758|ref|ZP_05741677.1| ferredoxin-1 [Silicibacter sp. TrichCH4B] gi|259346664|gb|EEW58478.1| ferredoxin-1 [Silicibacter sp. TrichCH4B] Length = 112 Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDQWVEFNRKYAELWPVIVSKKDPMPGYEERDGEEGKLEKYFSEAPG 109 >gi|126738719|ref|ZP_01754415.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126719900|gb|EBA16607.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 112 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +Y+ WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPMPGYEEKDGEEGKLEKYFSEAPG 109 >gi|323138997|ref|ZP_08074057.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylocystis sp. ATCC 49242] gi|322395751|gb|EFX98292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylocystis sp. ATCC 49242] Length = 112 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 85/109 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 LE WLK+N++ A WPNIT K+E A + DG K+E +FS PG Sbjct: 61 ENLEQWLKLNADMAQNWPNITIKREPPADAKEWDGKPGKFEAHFSAEPG 109 >gi|83941124|ref|ZP_00953586.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] gi|83846944|gb|EAP84819.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] Length = 112 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEERDGEEGKLEKYFSEAPG 109 >gi|260426157|ref|ZP_05780136.1| ferredoxin [Citreicella sp. SE45] gi|260420649|gb|EEX13900.1| ferredoxin [Citreicella sp. SE45] Length = 112 Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 75/109 (68%), Positives = 85/109 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +YA WP I +KKE +P DG K +KYFS PG Sbjct: 61 PDMDKWVEFNRKYAEMWPVIISKKEPMPGYEDRDGEPGKLDKYFSEAPG 109 >gi|94497219|ref|ZP_01303791.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] gi|94423324|gb|EAT08353.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] Length = 112 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++N++Y+ +WPNIT K ++ A M+GV+ K E++FSP PG Sbjct: 61 NGLEKWLELNTKYSAEWPNITVKGDAPADAEAMNGVENKLEQFFSPEPG 109 >gi|84687444|ref|ZP_01015322.1| iron-sulfur cluster-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84664602|gb|EAQ11088.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2654] Length = 110 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 74/110 (67%), Positives = 85/110 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDKCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 P E W++ N +Y+ WP I KK+ LP A + DG + K EKYFS PGG Sbjct: 61 PEAEKWVEFNRKYSELWPVIIEKKDPLPEAEERDGEEGKLEKYFSEAPGG 110 >gi|148556440|ref|YP_001264022.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingomonas wittichii RW1] gi|148501630|gb|ABQ69884.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sphingomonas wittichii RW1] Length = 112 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++N+ +A QWPNIT K+E+ A + V+ KYEK+FSP PG Sbjct: 61 SGLEQWLELNNTFAAQWPNITRKREAPADADEWKNVEGKYEKHFSPEPG 109 >gi|254454463|ref|ZP_05067900.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] gi|198268869|gb|EDY93139.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] Length = 111 Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 87/109 (79%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E FS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQLPNAEEMDGKEDKME-LFSEAPG 108 >gi|304321708|ref|YP_003855351.1| hypothetical protein PB2503_10789 [Parvularcula bermudensis HTCC2503] gi|303300610|gb|ADM10209.1| hypothetical protein PB2503_10789 [Parvularcula bermudensis HTCC2503] Length = 112 Score = 156 bits (395), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGENFLAI PDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYVVTDACIACKYTDCVEVCPVDCFYEGENFLAIKPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 W ++N++YA QWPNIT K +LP A M V+ K E +FS PG Sbjct: 61 DPDGKWTELNAKYAEQWPNITKAKPALPEADAMADVENKLETHFSEKPG 109 >gi|126727501|ref|ZP_01743335.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] gi|126703281|gb|EBA02380.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] Length = 112 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 70/109 (64%), Positives = 88/109 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P ++ W++ N +Y+ WP I T+K+ +AA+M+GV+ K E +FS PG Sbjct: 61 PDMDKWVEFNRKYSELWPVIITRKDPPANAAEMEGVEGKLESHFSEKPG 109 >gi|163797038|ref|ZP_02190994.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159177785|gb|EDP62336.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 112 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 72/112 (64%), Positives = 84/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VTE CI CK+TDCVEVCPVDCFYEG N L IHPDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYIVTEACIKCKYTDCVEVCPVDCFYEGANMLVIHPDECIDCGVCEPECPPEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 E WL++N EY+ WPNIT K +++P A M K K+E++F PG N Sbjct: 61 TEAEKWLEMNREYSEAWPNITRKIDAMPEADAMQAEKGKFERFFDSGPGQGN 112 >gi|154246582|ref|YP_001417540.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160667|gb|ABS67883.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 111 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 76/109 (69%), Positives = 84/109 (77%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD E Sbjct: 1 MTYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL +N+EYA WPNIT K++ A + DG K E+ FSP PG Sbjct: 61 LGLEKWLALNAEYAKAWPNITLKRDPPADAKEWDG-KPGKEELFSPEPG 108 >gi|296447998|ref|ZP_06889904.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylosinus trichosporium OB3b] gi|296254508|gb|EFH01629.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylosinus trichosporium OB3b] Length = 112 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 83/109 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEG N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MPYVVTENCIKCKYMDCVEVCPVDCFYEGVNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P LE W+ +N+EYA WPN+T K++ A + DG K E FSP PG Sbjct: 61 PDLEKWMALNAEYAQVWPNVTIKRDPPADAKEWDGKPGKLESGFSPEPG 109 >gi|254441817|ref|ZP_05055310.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] gi|198251895|gb|EDY76210.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] Length = 133 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 72/109 (66%), Positives = 87/109 (79%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 23 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 82 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K + FS PG Sbjct: 83 PDMEKWVEFNLKYSEMWPVIITKKDQLPTAEEMDGKEGKLD-LFSEAPG 130 >gi|288957084|ref|YP_003447425.1| ferredoxin [Azospirillum sp. B510] gi|288909392|dbj|BAI70881.1| ferredoxin [Azospirillum sp. B510] Length = 110 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 84/110 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MPYVVTDGCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 WL++N +Y+ QWPNIT KK++ A GV K+EK+FSP GG Sbjct: 61 DRATKWLELNRDYSGQWPNITRKKDAPADADTFKGVDGKFEKFFSPKAGG 110 >gi|85375452|ref|YP_459514.1| ferredoxin II [Erythrobacter litoralis HTCC2594] gi|84788535|gb|ABC64717.1| ferredoxin II [Erythrobacter litoralis HTCC2594] Length = 112 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL+IN++++ WPNIT KKE A + G + KYEKYFS PG Sbjct: 61 DGLEKWLEINTKFSADWPNITQKKEPPADADEHKGEEDKYEKYFSAEPG 109 >gi|85709784|ref|ZP_01040849.1| ferredoxin II [Erythrobacter sp. NAP1] gi|85688494|gb|EAQ28498.1| ferredoxin II [Erythrobacter sp. NAP1] Length = 112 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 71/109 (65%), Positives = 89/109 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTEDCIKCKYTDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++N++++ +WPNIT++K+ A + G + K+EKYFS PG Sbjct: 61 DGLEKWLELNTKFSAEWPNITSQKDPPADADEHKGEENKFEKYFSAEPG 109 >gi|163746985|ref|ZP_02154342.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161380099|gb|EDQ04511.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 111 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E FS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPAAEEMDGKEGKME-LFSEKPG 108 >gi|84515405|ref|ZP_01002767.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] gi|84510688|gb|EAQ07143.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] Length = 111 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 85/109 (77%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP I TKK+ LP A +MDG K + FS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPGAEEMDGKPGKLD-LFSEAPG 108 >gi|310815307|ref|YP_003963271.1| iron-sulfur cluster-binding protein [Ketogulonicigenium vulgare Y25] gi|308754042|gb|ADO41971.1| iron-sulfur cluster-binding protein [Ketogulonicigenium vulgare Y25] Length = 111 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/109 (66%), Positives = 85/109 (77%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P +E W++ N +Y+ WP IT++++ LP +MDG K S NPG Sbjct: 61 PDMEKWVEFNRKYSEMWPVITSRRDPLPGYEEMDGKPGKL-ALLSENPG 108 >gi|126733166|ref|ZP_01748913.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126716032|gb|EBA12896.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 111 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 70/103 (67%), Positives = 83/103 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P +E W++ N +Y+ WP I TKK+ LP+A MDG + K E + Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPTADDMDGKEGKMELF 103 >gi|87198149|ref|YP_495406.1| 4Fe-4S ferredoxin, iron-sulfur binding [Novosphingobium aromaticivorans DSM 12444] gi|87133830|gb|ABD24572.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 112 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 71/109 (65%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++N++Y+ +WPNIT KK++ A + G + K++KYFS PG Sbjct: 61 SGLEQWLELNAKYSAEWPNITAKKDAPADADEHKGEEGKFDKYFSAEPG 109 >gi|89069369|ref|ZP_01156728.1| iron-sulfur cluster-binding protein [Oceanicola granulosus HTCC2516] gi|89045136|gb|EAR51207.1| iron-sulfur cluster-binding protein [Oceanicola granulosus HTCC2516] Length = 111 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 71/103 (68%), Positives = 82/103 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P +E W++ N +YA WP I TKK+ LP A +MDG K E + Sbjct: 61 PDVEKWVEFNRKYAEIWPVIITKKDPLPKAEEMDGKSGKLELF 103 >gi|209965507|ref|YP_002298422.1| ferredoxin II [Rhodospirillum centenum SW] gi|209958973|gb|ACI99609.1| ferredoxin II [Rhodospirillum centenum SW] Length = 111 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 72/109 (66%), Positives = 83/109 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MPYVVTELCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E WL++N EY+T WPN+ KK + A + G+ KY K+FSP PG Sbjct: 61 PKAEPWLELNREYSTNWPNLNRKKPAPADADEYKGMPDKYAKFFSPKPG 109 >gi|326386141|ref|ZP_08207765.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209366|gb|EGD60159.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 112 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 71/109 (65%), Positives = 86/109 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTEACIKCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE WL++N++Y+ +WPN+T KK++ A + G + K++KYFS PG Sbjct: 61 SGLEQWLELNAKYSAEWPNLTAKKDAPADADEHKGEEGKFDKYFSAEPG 109 >gi|255263563|ref|ZP_05342905.1| ferredoxin-1 [Thalassiobium sp. R2A62] gi|255105898|gb|EET48572.1| ferredoxin-1 [Thalassiobium sp. R2A62] Length = 111 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 69/103 (66%), Positives = 84/103 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E + Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPNADEMDGKEGKMELF 103 >gi|56551116|ref|YP_161955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241761474|ref|ZP_04759562.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56542690|gb|AAV88844.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374381|gb|EER63878.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 112 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 72/112 (64%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE W+++N +YA +WPNIT K + A +M V K EK+FSP PG + Sbjct: 61 NGLESWMELNRKYAEEWPNITHKTDVPADADEMREVTGKLEKFFSPKPGNGD 112 >gi|260753231|ref|YP_003226124.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552594|gb|ACV75540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 112 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 72/112 (64%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE W+++N +YA +WPNIT K + A +M V K EK+FSP PG + Sbjct: 61 NGLESWMELNRKYAEEWPNITHKTDVPGDADEMREVTGKLEKFFSPKPGNGD 112 >gi|253795562|ref|YP_003038658.1| putative Ferredoxin II [Candidatus Hodgkinia cicadicola Dsem] gi|253739870|gb|ACT34205.1| putative Ferredoxin II [Candidatus Hodgkinia cicadicola Dsem] Length = 160 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 68/104 (65%), Positives = 81/104 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEG+NFL I+PDECIDCGVCEPECP AIK E Sbjct: 50 MAYVVTDNCICCKYTDCVEVCPVDCFYEGKNFLVINPDECIDCGVCEPECPAGAIKSARE 109 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PG+E W ++N+ A WPNI+ +K +P A + +GV K EKYF Sbjct: 110 PGVEKWAELNARCAKLWPNISRRKPPMPKADEFNGVANKLEKYF 153 >gi|296284816|ref|ZP_06862814.1| ferredoxin II [Citromicrobium bathyomarinum JL354] Length = 112 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 70/109 (64%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 LE WL++N++++ +WPNIT KK+ A + G + K+EK+F+P PG Sbjct: 61 DNLEKWLELNTKFSNEWPNITQKKDPPEDADEHKGEEGKFEKFFNPEPG 109 >gi|83859719|ref|ZP_00953239.1| ferredoxin A [Oceanicaulis alexandrii HTCC2633] gi|83852078|gb|EAP89932.1| ferredoxin A [Oceanicaulis alexandrii HTCC2633] Length = 111 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP++AIKPDTE Sbjct: 1 MTYIVTDACIRCKFTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPIEAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + WL +NS+YAT+WPNIT +K+ + + + K EKYFS P Sbjct: 61 DDADGKWLALNSKYATEWPNITVRKDPPADYKEFETITNKLEKYFSEKPAS 111 >gi|182680040|ref|YP_001834186.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635923|gb|ACB96697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 112 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 68/109 (62%), Positives = 82/109 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YVV ENCI CK+ DCVEVCPVDCFYEGE L I+PDECIDCGVCEPECP +AIKPDT Sbjct: 1 MSYVVLENCIKCKYMDCVEVCPVDCFYEGETMLVINPDECIDCGVCEPECPAEAIKPDTV 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 GLE W +N + A WPN+T K+E+ P A + DG K++ +F+ PG Sbjct: 61 SGLEKWQALNRKMAQYWPNVTVKREAPPEAKQFDGRPGKFDAFFTETPG 109 >gi|89055800|ref|YP_511251.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88865349|gb|ABD56226.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 111 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 68/103 (66%), Positives = 81/103 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P ++ W++ N +Y+ WP I TKK+ LP+A MDG K E + Sbjct: 61 PDMDKWVEFNRKYSEMWPVIITKKDPLPTADDMDGKPGKMELF 103 >gi|218532108|ref|YP_002422924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|218524411|gb|ACK84996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] Length = 112 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/105 (65%), Positives = 81/105 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFY G+ L I+PDECIDCGVCEPECP DAIK DTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYVGDTMLVINPDECIDCGVCEPECPADAIKADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 PGL+ W+ +N++YA WPNI+ K++ L AA DG K E F Sbjct: 61 PGLDGWIALNAKYAALWPNISEKRDPLHDAAAWDGRPGKLESVFG 105 >gi|149185281|ref|ZP_01863598.1| ferredoxin II [Erythrobacter sp. SD-21] gi|148831392|gb|EDL49826.1| ferredoxin II [Erythrobacter sp. SD-21] Length = 112 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/109 (63%), Positives = 87/109 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 LE WL++N++++ +WPNIT++KE A + G + K++K+FS PG Sbjct: 61 DNLEKWLELNTKFSAEWPNITSQKEPPADADEHKGEEGKFDKFFSAEPG 109 >gi|114570845|ref|YP_757525.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Maricaulis maris MCS10] gi|114341307|gb|ABI66587.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Maricaulis maris MCS10] Length = 113 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 75/113 (66%), Positives = 87/113 (76%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYIVTDACVRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + WL INS++A WPNIT +K++ A M KYEKYFS PG + Sbjct: 61 DDKDGKWLAINSKFAETWPNITLRKDAPADADAMADETGKYEKYFSEKPGSGD 113 >gi|16124907|ref|NP_419471.1| ferredoxin A [Caulobacter crescentus CB15] gi|221233628|ref|YP_002516064.1| ferredoxin [Caulobacter crescentus NA1000] gi|10719994|sp|Q45972|FER1_CAUCR RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|497275|gb|AAA85787.1| ferredoxin A [Caulobacter crescentus CB15] gi|13421869|gb|AAK22639.1| ferredoxin A [Caulobacter crescentus CB15] gi|220962800|gb|ACL94156.1| ferredoxin [Caulobacter crescentus NA1000] Length = 113 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 73/110 (66%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDACVRCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WLKIN++YA WPNIT K E + K+EKYFS PG Sbjct: 61 DEADGKWLKINADYAKVWPNITVKGEPPADREDFERETGKFEKYFSEKPG 110 >gi|302384120|ref|YP_003819943.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brevundimonas subvibrioides ATCC 15264] gi|302194748|gb|ADL02320.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brevundimonas subvibrioides ATCC 15264] Length = 133 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DC+EVCPVDCFYEGENFLAI PDECIDCGVCEPECPVDAIKPDTE Sbjct: 21 MTYIVTDACVKCKFMDCIEVCPVDCFYEGENFLAIAPDECIDCGVCEPECPVDAIKPDTE 80 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WL+IN++YA WPNIT K + + K+EKYFSP PG Sbjct: 81 DEPDGKWLQINAQYARVWPNITVKGTPPADREQYERETGKFEKYFSPEPG 130 >gi|167648072|ref|YP_001685735.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Caulobacter sp. K31] gi|167350502|gb|ABZ73237.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caulobacter sp. K31] Length = 113 Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 74/110 (67%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK DCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP+DAIKPDTE Sbjct: 1 MTYIVTDACIKCKFMDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPIDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WL+INSEYA WPNIT K + K+EKYFS PG Sbjct: 61 DEPDGKWLRINSEYAKIWPNITVKGVPPADREAFERETGKFEKYFSEKPG 110 >gi|30580420|sp|Q44037|FER1_AFIFE RecName: Full=Ferredoxin-1 gi|550302|emb|CAA57420.1| ferredoxin [Afipia felis] Length = 93 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 71/92 (77%), Positives = 78/92 (84%), Gaps = 1/92 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 LE WL +N+EYA WPNIT KK++ P+ AK Sbjct: 61 QNLEKWLGVNAEYAKTWPNITQKKDA-PADAK 91 >gi|294084640|ref|YP_003551398.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664213|gb|ADE39314.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 112 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 68/112 (60%), Positives = 82/112 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PD+E Sbjct: 1 MTYIVNENCINCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPPEAILPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P WL +N + + WPNI K + +P+A + K++KYF+ PG N Sbjct: 61 PEATKWLDLNRDMSEIWPNIGQKIDEMPNAKAAESETGKFDKYFTKAPGKGN 112 >gi|197104174|ref|YP_002129551.1| ferredoxin A [Phenylobacterium zucineum HLK1] gi|196477594|gb|ACG77122.1| ferredoxin A [Phenylobacterium zucineum HLK1] Length = 113 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 73/110 (66%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVMDPCIKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WLK+NSEY+ WPNIT K A + + K+EKYFS PG Sbjct: 61 DDPDGKWLKVNSEYSRVWPNITVKGTPPADAEQFERESGKFEKYFSEKPG 110 >gi|114799500|ref|YP_762091.1| ferredoxin [Hyphomonas neptunium ATCC 15444] gi|114739674|gb|ABI77799.1| ferredoxin [Hyphomonas neptunium ATCC 15444] Length = 113 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/113 (63%), Positives = 82/113 (72%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYIVVDACIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + WLK+NS+YA WPNIT KE + K EKYF+ NPG + Sbjct: 61 DDPDGKWLKLNSDYAKVWPNITRMKEPPADREEFAQETGKLEKYFTANPGAGD 113 >gi|238027280|ref|YP_002911511.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia glumae BGR1] gi|237876474|gb|ACR28807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia glumae BGR1] Length = 111 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTENCI CKHTDCV+VCPVDCF+EGENFLAI PDECIDCGVCEPECPVDAI+ D+ Sbjct: 1 MTYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P ++L +N E A WP+IT+K+ +LP AA+ V+ K E Sbjct: 61 LAPEQRIFLDLNRELAQNWPSITSKRAALPDAARWKDVEGKLE 103 >gi|329848407|ref|ZP_08263435.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] gi|328843470|gb|EGF93039.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] Length = 112 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 71/109 (65%), Positives = 81/109 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDPCVKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 WL+IN++YA WPNI+ K + + KYEKYFS PG Sbjct: 61 DEGTKWLEINTKYAAVWPNISEKGTPPADREEYERETGKYEKYFSEKPG 109 >gi|299134345|ref|ZP_07027538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298591092|gb|EFI51294.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 113 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PD++ Sbjct: 1 MTHVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFPDSD 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E WL+ N +YA+ WPNI KK A K +GVK K+E YFS PG Sbjct: 61 PAAEPKWLEQNKKYASLWPNIPFKKTPPEDADKWNGVKDKFEPYFSEKPG 110 >gi|254419877|ref|ZP_05033601.1| 4Fe-4S binding domain protein [Brevundimonas sp. BAL3] gi|196186054|gb|EDX81030.1| 4Fe-4S binding domain protein [Brevundimonas sp. BAL3] Length = 113 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 72/110 (65%), Positives = 81/110 (73%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I PDECIDCGVCEPECPVDAI PDTE Sbjct: 1 MTYIVTDACVKCKFMDCVEVCPVDCFYEGENFLVIAPDECIDCGVCEPECPVDAIVPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WL++N+EYA WPNIT K + + KYEKYFSP PG Sbjct: 61 DEPDGKWLQVNAEYAKVWPNITVKGTPPADREQYERETGKYEKYFSPKPG 110 >gi|170745425|ref|YP_001766882.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170659026|gb|ACB28080.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 112 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 70/105 (66%), Positives = 75/105 (71%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFY GE L I PDECIDCGVCEPECP DAIK DTE Sbjct: 1 MTYVVTENCIRCKYTDCVEVCPVDCFYVGETMLVIDPDECIDCGVCEPECPADAIKADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 PGLE W N++YA WPNI K + AA+ DG K F Sbjct: 61 PGLEGWKAFNAKYAALWPNIAEKVDPAADAAEWDGRDGKLIAVFG 105 >gi|126726969|ref|ZP_01742807.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] gi|126703641|gb|EBA02736.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] Length = 111 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 G E WLK+N+E A QWP I + + A + G + K+ + S P + Sbjct: 61 SGHETWLKLNAELAEQWPVIDEQIDPPADADQWLGKQNKWTE-LSREPAAR 110 >gi|295691060|ref|YP_003594753.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432963|gb|ADG12135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caulobacter segnis ATCC 21756] Length = 113 Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDACVRCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WL++N++YA WPNIT K + + K+EKYFS PG Sbjct: 61 DEPDGKWLRVNADYAKVWPNITVKGVPPEDREQFERETGKFEKYFSEKPG 110 >gi|329890830|ref|ZP_08269173.1| ferredoxin-2 [Brevundimonas diminuta ATCC 11568] gi|328846131|gb|EGF95695.1| ferredoxin-2 [Brevundimonas diminuta ATCC 11568] Length = 113 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 71/110 (64%), Positives = 81/110 (73%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I PDECIDCGVCEPECPVDAI PDTE Sbjct: 1 MTYIVTDACVKCKFMDCVEVCPVDCFYEGENFLVIAPDECIDCGVCEPECPVDAIVPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WL++N+EYA WPNIT K + + K+EKYFSP PG Sbjct: 61 DEPDGKWLQVNAEYAKVWPNITVKGVPPADREQYERETGKFEKYFSPKPG 110 >gi|209886244|ref|YP_002290101.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] gi|209874440|gb|ACI94236.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] Length = 113 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENC+ CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PD++ Sbjct: 1 MTHVVTENCVKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFPDSD 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E WL+ N +Y+ WPNI KK A K +GV KY++YFS PG Sbjct: 61 PAAEPQWLEQNRKYSAIWPNIPFKKVPPEDADKWNGVPNKYDQYFSEKPG 110 >gi|83313418|ref|YP_423682.1| ferredoxin II [Magnetospirillum magneticum AMB-1] gi|82948259|dbj|BAE53123.1| Ferredoxin II [Magnetospirillum magneticum AMB-1] Length = 123 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/109 (63%), Positives = 77/109 (70%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 15 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSD 74 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P W N +YA WPNIT K ++ A G K K SPNPG Sbjct: 75 PKATAWTDTNRQYAGSWPNITRKGDAPADADDWKGKPDK-AKLLSPNPG 122 >gi|118592843|ref|ZP_01550232.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Stappia aggregata IAM 12614] gi|118434613|gb|EAV41265.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Stappia aggregata IAM 12614] Length = 108 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 65/102 (63%), Positives = 81/102 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI DT+ Sbjct: 1 MTFVVTENCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILADTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 P + W+ +N++YA WP IT K +++P A +GV+ K E+ Sbjct: 61 PEAQKWIDLNAKYAALWPVITEKIDAMPDAEDWNGVEGKLEQ 102 >gi|40062704|gb|AAR37617.1| ferredoxin [uncultured marine bacterium 314] Length = 113 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 83/111 (74%), Gaps = 3/111 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK DCV+VCPVDCFYEGEN LAI PDECIDCGVCEPECP+DAIKPDT+ Sbjct: 1 MTYIVNDNCIKCKLMDCVDVCPVDCFYEGENMLAIKPDECIDCGVCEPECPIDAIKPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKK-ESLP-SAAKMDGVKQKYEKYFSPNPG 109 G W++ N++Y WPNIT K+ E +P K GVK K KYFS PG Sbjct: 61 EGASDWVEHNTKYGDLWPNITKKRSEDVPHDQEKWRGVKDKL-KYFSEKPG 110 >gi|315498121|ref|YP_004086925.1| ferredoxin a [Asticcacaulis excentricus CB 48] gi|315416133|gb|ADU12774.1| ferredoxin A [Asticcacaulis excentricus CB 48] Length = 113 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 73/112 (65%), Positives = 86/112 (76%), Gaps = 5/112 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDPCVKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ--KYEKYFSPNPG 109 + WL++NS+YA WPNI+ K P A + D ++ K+EKYFS PG Sbjct: 61 DEPDGKWLEVNSKYARVWPNISVK--GTPPADREDFERETGKFEKYFSEKPG 110 >gi|262277940|ref|ZP_06055733.1| ferredoxin-1 (Ferredoxin I) (FdI) [alpha proteobacterium HIMB114] gi|262225043|gb|EEY75502.1| ferredoxin-1 (Ferredoxin I) (FdI) [alpha proteobacterium HIMB114] Length = 107 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/105 (63%), Positives = 78/105 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V E CI CK TDCV+VCPVDCFYEGEN L I+PDECIDCGVCEPECP+DAI+PDT Sbjct: 1 MTYIVNEKCIKCKLTDCVDVCPVDCFYEGENMLVINPDECIDCGVCEPECPIDAIEPDTN 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 +E L +N EY+ +WPNI+ KKE L K K K+ KYF Sbjct: 61 ANVEEMLLVNKEYSLKWPNISKKKEPLNDWEKYKDEKDKFNKYFE 105 >gi|332717239|ref|YP_004444705.1| Ferredoxin [Agrobacterium sp. H13-3] gi|325063924|gb|ADY67614.1| Ferredoxin [Agrobacterium sp. H13-3] Length = 111 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 64/112 (57%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YVVTENCI CK+ DCVEVCPV+CFY GEN L IHPD+CIDCG+CE ECP AI+PDTE Sbjct: 1 MSYVVTENCIACKYMDCVEVCPVECFYAGENMLVIHPDQCIDCGICERECPAAAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL +WL +N Y+ WP + K+ A M+G K+ FS NPG + Sbjct: 61 AGLHVWLDLNRHYSGIWPRVHQKRTPPDDADIMNGAAAKF-SIFSKNPGAGD 111 >gi|23014750|ref|ZP_00054551.1| COG1146: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 67/109 (61%), Positives = 78/109 (71%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P W N +Y+++WPNIT K ++ A G K K SP PG Sbjct: 61 PAAAAWTDTNRQYSSEWPNITRKGDAPADADDWKGKPDK-AKLLSPKPG 108 >gi|144899570|emb|CAM76434.1| 4Fe-4S ferredoxin, iron-sulfur binding [Magnetospirillum gryphiswaldense MSR-1] Length = 141 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 5/111 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 30 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIVPDSD 89 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK--YFSPNPG 109 W ++N +Y+ QWPNIT K + + A D K K +K SPNPG Sbjct: 90 DKAAAWAQLNRDYSGQWPNITRKGD---APADADAWKNKPDKADLLSPNPG 137 >gi|71083130|ref|YP_265849.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1062] gi|91762443|ref|ZP_01264408.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1002] gi|71062243|gb|AAZ21246.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1062] gi|91718245|gb|EAS84895.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1002] Length = 108 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 68/107 (63%), Positives = 79/107 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK DCVEVCPVDCFYEG+N L I P+ECIDCGVCEPECPVDAI DTE Sbjct: 1 MTYVVNDKCIKCKLMDCVEVCPVDCFYEGKNMLVIKPEECIDCGVCEPECPVDAIVADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 G E WL++N++Y+ WPNIT KK+ K + KY+KYFS N Sbjct: 61 SGSEKWLELNTKYSEIWPNITIKKDPPEDNEKYKNEENKYDKYFSEN 107 >gi|300021613|ref|YP_003754224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523434|gb|ADJ21903.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 114 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 69/114 (60%), Positives = 80/114 (70%), Gaps = 2/114 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI D E Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFSDAE 60 Query: 61 P-GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 P WL +N ++A QWPNI KK ++P A +G K + FSP ++ Sbjct: 61 PQATAHWLDLNRKHADQWPNIVAKKAAMPDADAENGRAGKAAE-FSPEAATEDA 113 >gi|159186232|ref|NP_356078.2| ferredoxin [Agrobacterium tumefaciens str. C58] gi|159141366|gb|AAK88863.2| ferredoxin [Agrobacterium tumefaciens str. C58] Length = 111 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 64/110 (58%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPV+CFYEGEN L IHPD+CIDCG+CE ECP AI+PDTE Sbjct: 1 MPYVVTENCIACKYMDCVEVCPVECFYEGENMLVIHPDQCIDCGICERECPAAAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 GL +WL +N Y+ WP + K+ +A M+G K+ S NPG Sbjct: 61 AGLHVWLDLNRHYSGIWPRVHQKRTPPDNADTMNGAAAKF-SILSKNPGA 109 >gi|58040345|ref|YP_192309.1| ferredoxin [Gluconobacter oxydans 621H] gi|58002759|gb|AAW61653.1| Ferredoxin [Gluconobacter oxydans 621H] Length = 110 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 63/90 (70%), Positives = 76/90 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK TDCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFTDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSA 90 W++IN++Y+TQWPN+T K +++P A Sbjct: 61 NRAAPWIEINAKYSTQWPNMTRKIDAMPDA 90 >gi|229365481|dbj|BAH57989.1| hypothetical protein [Acetobacter lovaniensis] Length = 112 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 3 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 62 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNI T+K + P+ A+ K + SPNP Sbjct: 63 DRAAAWAEINAKYATQWPNI-TRKGTPPADAEEWKDKPNKTELLSPNP 109 >gi|258541199|ref|YP_003186632.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01] gi|256632277|dbj|BAH98252.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01] gi|256635334|dbj|BAI01303.1| ferredoxin [Acetobacter pasteurianus IFO 3283-03] gi|256638389|dbj|BAI04351.1| ferredoxin [Acetobacter pasteurianus IFO 3283-07] gi|256641443|dbj|BAI07398.1| ferredoxin [Acetobacter pasteurianus IFO 3283-22] gi|256644498|dbj|BAI10446.1| ferredoxin [Acetobacter pasteurianus IFO 3283-26] gi|256647553|dbj|BAI13494.1| ferredoxin [Acetobacter pasteurianus IFO 3283-32] gi|256650606|dbj|BAI16540.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653597|dbj|BAI19524.1| ferredoxin [Acetobacter pasteurianus IFO 3283-12] Length = 110 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNI T+K + P+ A+ K + SPNP Sbjct: 61 DRAAAWAEINAKYATQWPNI-TRKGTPPADAEEWKDKPNKTELLSPNP 107 >gi|254293139|ref|YP_003059162.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hirschia baltica ATCC 49814] gi|254041670|gb|ACT58465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hirschia baltica ATCC 49814] Length = 113 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 68/110 (61%), Positives = 81/110 (73%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L I P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYIVIDACIKCKYTDCVEVCPVDCFYEGENMLVIDPEECIDCGVCEPECPAEAIVPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + WLK+N+EYA +WPNIT +K+ A + VK K +FS PG Sbjct: 61 DDKDGKWLKLNTEYAAKWPNITVRKDPPEDADEWSQVKDKLGPHFSEKPG 110 >gi|329114808|ref|ZP_08243565.1| Ferredoxin-2 [Acetobacter pomorum DM001] gi|326695939|gb|EGE47623.1| Ferredoxin-2 [Acetobacter pomorum DM001] Length = 112 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 3 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 62 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNI T+K + P+ A+ K + SP+P Sbjct: 63 DRAAAWAEINAKYATQWPNI-TRKGTPPADAEEWKDKPNKTELLSPDP 109 >gi|332186983|ref|ZP_08388724.1| 4Fe-4S binding domain protein [Sphingomonas sp. S17] gi|332012993|gb|EGI55057.1| 4Fe-4S binding domain protein [Sphingomonas sp. S17] Length = 99 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 63/95 (66%), Positives = 76/95 (80%), Gaps = 1/95 (1%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE GLE WL++N+ ++ Sbjct: 2 DCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTESGLEQWLELNTTFSA 61 Query: 76 QWPNITTK-KESLPSAAKMDGVKQKYEKYFSPNPG 109 QWPN+T K ++ P A M GV+ KYE++FSP PG Sbjct: 62 QWPNVTRKLDQTPPDADAMKGVENKYEQFFSPEPG 96 >gi|71064823|ref|YP_263550.1| ferredoxin [Psychrobacter arcticus 273-4] gi|71037808|gb|AAZ18116.1| ferredoxin, 4Fe-Fs binding domain [Psychrobacter arcticus 273-4] Length = 107 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCILCK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCILCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++ ++N E A +WPNIT KE +P AAK DGV+ K + Sbjct: 61 VPKGQEMFTQLNEELAQKWPNITEMKEQMPEAAKWDGVEGKIQ 103 >gi|52857656|gb|AAU89081.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/80 (80%), Positives = 68/80 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNI 80 LE WL +N+EYA WP I Sbjct: 61 QNLEKWLGVNAEYAKTWPTI 80 >gi|330967908|gb|EGH68168.1| ferredoxin [Pseudomonas syringae pv. actinidiae str. M302091] Length = 107 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/103 (65%), Positives = 81/103 (78%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK+S+P AA+ DG K K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDSMPDAAEWDGKKGKIE 103 >gi|83591417|ref|YP_425169.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] gi|83574331|gb|ABC20882.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] Length = 112 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 80/111 (72%), Gaps = 5/111 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD+E Sbjct: 1 MPYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK--YFSPNPG 109 WL+IN ++A WPNIT K P+ A D K K +K S NPG Sbjct: 61 AIAGKWLEINRKFADLWPNITRKG---PALADADDWKDKPDKTGLLSENPG 108 >gi|296537277|ref|ZP_06899163.1| ferredoxin [Roseomonas cervicalis ATCC 49957] gi|296262395|gb|EFH09134.1| ferredoxin [Roseomonas cervicalis ATCC 49957] Length = 110 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 76/109 (69%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTENCIRCKYMDCVEVCPVDCFYVGENMLVIHPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 W ++N Y+ QWPNIT K E+ A +G K + F P PG Sbjct: 61 DKAADWAELNRTYSQQWPNITRKGEAPEDAEAWNGKPDK-KALFDPKPG 108 >gi|94501247|ref|ZP_01307769.1| ferredoxin [Oceanobacter sp. RED65] gi|94426674|gb|EAT11660.1| ferredoxin [Oceanobacter sp. RED65] Length = 107 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++++N+E A +WPNIT K+ LP A + DGV+ K E Sbjct: 61 LPAGQEKFIELNAELAEEWPNITEMKDKLPDAEEWDGVEGKIE 103 >gi|154246030|ref|YP_001416988.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160115|gb|ABS67331.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 120 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/109 (62%), Positives = 76/109 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK DCV VCPVDCFYEGEN L I+PDECIDCGVCEPECP AI DT Sbjct: 1 MAYVVTDNCIRCKFMDCVAVCPVDCFYEGENMLVINPDECIDCGVCEPECPAAAIAADTA 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P W+ +N++YA WPNI KKE AA+ V K+E FSP PG Sbjct: 61 PEAGPWIALNAQYAALWPNIAEKKEPPADAAQWMDVADKFESAFSPAPG 109 >gi|28871202|ref|NP_793821.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213969150|ref|ZP_03397289.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|301383955|ref|ZP_07232373.1| ferredoxin [Pseudomonas syringae pv. tomato Max13] gi|302064159|ref|ZP_07255700.1| ferredoxin [Pseudomonas syringae pv. tomato K40] gi|302134755|ref|ZP_07260745.1| ferredoxin [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854452|gb|AAO57516.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213926148|gb|EEB59704.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|330872695|gb|EGH06844.1| ferredoxin [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016400|gb|EGH96456.1| ferredoxin [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 107 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK+ +P AA DG K K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDGMPDAADWDGKKGKIE 103 >gi|331006208|ref|ZP_08329530.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC1989] gi|330419965|gb|EGG94309.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC1989] Length = 107 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/105 (62%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP DAI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPADAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E++L++N+E A WPNIT KE+ A + DGV+ K + Sbjct: 61 LPEGQEVFLELNAELAETWPNITEMKEAPADAEEWDGVEGKLQHL 105 >gi|52857664|gb|AAU89085.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 62/79 (78%), Positives = 67/79 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPN 79 LE WL +++EYA WP Sbjct: 61 QNLEKWLGVSAEYAKTWPK 79 >gi|52857660|gb|AAU89083.1| ferredoxin [uncultured Afipia sp.] Length = 81 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 62/79 (78%), Positives = 67/79 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPN 79 LE WL +++EYA WP Sbjct: 61 QNLEKWLGVSAEYAKTWPT 79 >gi|296112737|ref|YP_003626675.1| ferredoxin 1 [Moraxella catarrhalis RH4] gi|295920431|gb|ADG60782.1| ferredoxin 1 [Moraxella catarrhalis RH4] gi|326560986|gb|EGE11351.1| ferredoxin 1 [Moraxella catarrhalis 7169] gi|326563774|gb|EGE14025.1| ferredoxin 1 [Moraxella catarrhalis 46P47B1] gi|326563977|gb|EGE14227.1| ferredoxin 1 [Moraxella catarrhalis 12P80B1] gi|326566788|gb|EGE16927.1| ferredoxin 1 [Moraxella catarrhalis 103P14B1] gi|326567369|gb|EGE17484.1| ferredoxin 1 [Moraxella catarrhalis BC1] gi|326569888|gb|EGE19938.1| ferredoxin 1 [Moraxella catarrhalis BC8] gi|326571504|gb|EGE21519.1| ferredoxin 1 [Moraxella catarrhalis BC7] gi|326575213|gb|EGE25141.1| ferredoxin 1 [Moraxella catarrhalis CO72] gi|326576701|gb|EGE26608.1| ferredoxin 1 [Moraxella catarrhalis 101P30B1] gi|326577625|gb|EGE27502.1| ferredoxin 1 [Moraxella catarrhalis O35E] Length = 107 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +LKIN E + WPNIT KK++LP K DGV+ K + Sbjct: 61 VPSGQEEFLKINEELSAVWPNITEKKDALPDYEKWDGVEGKLQ 103 >gi|254786793|ref|YP_003074222.1| ferredoxin-1 [Teredinibacter turnerae T7901] gi|237685053|gb|ACR12317.1| ferredoxin-1 [Teredinibacter turnerae T7901] Length = 107 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E +L++N+E A WPNIT KKE+ A + DGV+ K + Sbjct: 61 LPSDQEAFLELNAELAEVWPNITEKKEAPADAEEWDGVEGKLQ 103 >gi|148653815|ref|YP_001280908.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572899|gb|ABQ94958.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Psychrobacter sp. PRwf-1] Length = 107 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++++N+E A +WPNIT K LP A K DGV+ K + Sbjct: 61 VPKGQEEFIELNAELAEEWPNITEMKGQLPDAEKWDGVEGKIQ 103 >gi|148262070|ref|YP_001236197.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|326405582|ref|YP_004285664.1| ferredoxin [Acidiphilium multivorum AIU301] gi|146403751|gb|ABQ32278.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] gi|325052444|dbj|BAJ82782.1| ferredoxin [Acidiphilium multivorum AIU301] Length = 110 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W++ N E+AT WPN+ T+K + P+ A + + FSP P Sbjct: 61 GKASAWIEKNREFATLWPNM-TRKGTPPADADEWKDRDGKAELFSPEP 107 >gi|93005103|ref|YP_579540.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92392781|gb|ABE74056.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 107 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCILCK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCILCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++ ++N E A +WPNIT K +P A K DGV+ K + Sbjct: 61 VPKGQEIFTQLNEELAQKWPNITEMKGQMPEAEKWDGVEGKIQ 103 >gi|158424426|ref|YP_001525718.1| ferredoxin [Azorhizobium caulinodans ORS 571] gi|158331315|dbj|BAF88800.1| ferredoxin [Azorhizobium caulinodans ORS 571] Length = 109 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+ DCV VCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MAYVVTDGCIRCKYMDCVSVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 P WL +N+EYA WPNIT K E A G K P P Sbjct: 61 PRAGEWLALNAEYAATWPNITEKGEPPADADDWKGKAGKL-ALLDPAPAA 109 >gi|146308040|ref|YP_001188505.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|145576241|gb|ABP85773.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] Length = 107 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 63/103 (61%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NC+ CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCVKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N++ A WPNIT KKE+LP A + DGVK K + Sbjct: 61 VPEDMQEYIELNADLAEVWPNITEKKEALPDAEEWDGVKDKLQ 103 >gi|162147815|ref|YP_001602276.1| ferredoxin [Gluconacetobacter diazotrophicus PAl 5] gi|209542438|ref|YP_002274667.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786392|emb|CAP55974.1| putative ferredoxin [Gluconacetobacter diazotrophicus PAl 5] gi|209530115|gb|ACI50052.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 110 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN+ Y+ +WPNI T+K + P+ A+ K + SP P Sbjct: 61 DRAAAWAEINASYSAKWPNI-TRKGTAPADAEEWKDKPGKKDLLSPEP 107 >gi|77457360|ref|YP_346865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens Pf0-1] gi|77381363|gb|ABA72876.1| ferredoxin I [Pseudomonas fluorescens Pf0-1] Length = 107 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/101 (66%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT KKESLP A + DGVK K Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKESLPDAEEWDGVKGK 101 >gi|330807813|ref|YP_004352275.1| ferredoxin I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375921|gb|AEA67271.1| ferredoxin I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 107 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 VPAGMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLK 103 >gi|57908873|gb|AAW59366.1| ferredoxin A [Azotobacter salinestris] Length = 107 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KKE+LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKEALPDAEDWDGVKGKLQ 103 >gi|329849717|ref|ZP_08264563.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] gi|328841628|gb|EGF91198.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] Length = 112 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/109 (58%), Positives = 75/109 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK DCV+VCPVDCFYEGENFL I P CIDCG+C PECPVDAIKP+ + Sbjct: 1 MTYVVTDPCIKCKFMDCVDVCPVDCFYEGENFLVIDPAVCIDCGICVPECPVDAIKPEDK 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 WL IN+++ WPNIT K +A + K+EKYFS PG Sbjct: 61 DTDGKWLAINTQFTAVWPNITRKGTPPADSADFERETGKFEKYFSERPG 109 >gi|15598817|ref|NP_252311.1| ferredoxin I [Pseudomonas aeruginosa PAO1] gi|116051618|ref|YP_789543.1| ferredoxin I [Pseudomonas aeruginosa UCBPP-PA14] gi|152985024|ref|YP_001346902.1| ferredoxin I [Pseudomonas aeruginosa PA7] gi|296387875|ref|ZP_06877350.1| ferredoxin I [Pseudomonas aeruginosa PAb1] gi|313108980|ref|ZP_07794955.1| ferredoxin I [Pseudomonas aeruginosa 39016] gi|81783634|sp|Q9HY07|FER1_PSEAE RecName: Full=Ferredoxin 1 gi|9949779|gb|AAG07009.1|AE004782_7 ferredoxin I [Pseudomonas aeruginosa PAO1] gi|115586839|gb|ABJ12854.1| ferredoxin I [Pseudomonas aeruginosa UCBPP-PA14] gi|150960182|gb|ABR82207.1| ferredoxin I [Pseudomonas aeruginosa PA7] gi|310881457|gb|EFQ40051.1| ferredoxin I [Pseudomonas aeruginosa 39016] Length = 107 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQ 103 >gi|332969296|gb|EGK08322.1| ferredoxin [Psychrobacter sp. 1501(2011)] Length = 107 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E A +WPNIT + LP A K DGV+ K + Sbjct: 61 VPKGQEEFIALNAELAEEWPNITEMHDQLPDAEKWDGVEGKIQ 103 >gi|90416735|ref|ZP_01224665.1| ferredoxin I [marine gamma proteobacterium HTCC2207] gi|90331488|gb|EAS46724.1| ferredoxin I [marine gamma proteobacterium HTCC2207] Length = 107 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT++V +NCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI + E Sbjct: 1 MTFIVGDNCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVGAIFAEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++L+IN+E A WPNIT K++ AA+ DGV+ K + Sbjct: 61 IPEGQEVFLEINAELADVWPNITEMKDAPADAAEWDGVENKLQ 103 >gi|49089178|gb|AAT51652.1| PA3621 [synthetic construct] Length = 108 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQ 103 >gi|302187930|ref|ZP_07264603.1| ferredoxin [Pseudomonas syringae pv. syringae 642] gi|330936780|gb|EGH40942.1| ferredoxin [Pseudomonas syringae pv. pisi str. 1704B] gi|330975363|gb|EGH75429.1| ferredoxin [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 107 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKTGK 101 >gi|289626002|ref|ZP_06458956.1| ferredoxin [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651482|ref|ZP_06482825.1| ferredoxin [Pseudomonas syringae pv. aesculi str. 2250] gi|298488244|ref|ZP_07006279.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157252|gb|EFH98337.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330868574|gb|EGH03283.1| ferredoxin [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330950645|gb|EGH50905.1| ferredoxin [Pseudomonas syringae Cit 7] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKTGK 101 >gi|312959253|ref|ZP_07773771.1| ferredoxin [Pseudomonas fluorescens WH6] gi|311286513|gb|EFQ65076.1| ferredoxin [Pseudomonas fluorescens WH6] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/104 (61%), Positives = 79/104 (75%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 G+E ++++N E A WPNIT +K+ +P AA+ DG K E+ Sbjct: 61 VPAGMEQFIQLNVELAEVWPNITERKDPMPDAAEWDGKPNKIEQ 104 >gi|107103135|ref|ZP_01367053.1| hypothetical protein PaerPA_01004204 [Pseudomonas aeruginosa PACS2] gi|218890154|ref|YP_002439018.1| ferredoxin I [Pseudomonas aeruginosa LESB58] gi|254236536|ref|ZP_04929859.1| ferredoxin I [Pseudomonas aeruginosa C3719] gi|254242319|ref|ZP_04935641.1| ferredoxin I [Pseudomonas aeruginosa 2192] gi|126168467|gb|EAZ53978.1| ferredoxin I [Pseudomonas aeruginosa C3719] gi|126195697|gb|EAZ59760.1| ferredoxin I [Pseudomonas aeruginosa 2192] gi|218770377|emb|CAW26142.1| ferredoxin I [Pseudomonas aeruginosa LESB58] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEIWPNITEKKDALPDAEEWDGVAGKLQ 103 >gi|66044623|ref|YP_234464.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|63255330|gb|AAY36426.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|330896093|gb|EGH28314.1| ferredoxin [Pseudomonas syringae pv. japonica str. M301072PT] gi|330968926|gb|EGH68992.1| ferredoxin [Pseudomonas syringae pv. aceris str. M302273PT] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEIWPNITEKKDAMPDAAEWDGKTGK 101 >gi|237800177|ref|ZP_04588638.1| ferredoxin [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023034|gb|EGI03091.1| ferredoxin [Pseudomonas syringae pv. oryzae str. 1_6] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK+ +P AA+ DG K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDGMPDAAEWDGKPGKIE 103 >gi|330959230|gb|EGH59490.1| ferredoxin [Pseudomonas syringae pv. maculicola str. ES4326] Length = 107 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/97 (64%), Positives = 78/97 (80%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT KK+++P AA+ DG Sbjct: 61 IPAGMENFIELNAELADVWPNITEKKDAMPDAAEWDG 97 >gi|71736534|ref|YP_275946.1| ferredoxin [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487048|ref|ZP_05641089.1| ferredoxin [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71557087|gb|AAZ36298.1| ferredoxin [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323088|gb|EFW79177.1| ferredoxin [Pseudomonas syringae pv. glycinea str. B076] gi|320329640|gb|EFW85629.1| ferredoxin [Pseudomonas syringae pv. glycinea str. race 4] gi|330878041|gb|EGH12190.1| ferredoxin [Pseudomonas syringae pv. glycinea str. race 4] gi|330894626|gb|EGH27287.1| ferredoxin [Pseudomonas syringae pv. mori str. 301020] gi|330985142|gb|EGH83245.1| ferredoxin [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009313|gb|EGH89369.1| ferredoxin [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 107 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/97 (64%), Positives = 78/97 (80%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT KK+++P AA+ DG Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDG 97 >gi|110834671|ref|YP_693530.1| ferredoxin, 4Fe-4S [Alcanivorax borkumensis SK2] gi|110647782|emb|CAL17258.1| ferredoxin, 4Fe-4S [Alcanivorax borkumensis SK2] Length = 107 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 2/107 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEGENFL IHPDECIDC +CEPECPV+AI + E Sbjct: 1 MTFVVGENCINCKHTDCVEVCPVDCFYEGENFLVIHPDECIDCALCEPECPVNAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 + +L+IN++ A +WPNIT K++ A + DGV K EK Sbjct: 61 LPDDQQDFLEINADLAEKWPNITEMKDAPDDAEEWDGVPNKREKLIR 107 >gi|167589295|ref|ZP_02381683.1| ferredoxin [Burkholderia ubonensis Bu] Length = 111 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CKHTDCVEVCPVDCF+EGENFL I PDECIDCGVCEPECPV AI+ D Sbjct: 1 MAYVVTENCINCKHTDCVEVCPVDCFHEGENFLVIDPDECIDCGVCEPECPVGAIRQDVA 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N E A WP +T +K +LP AA+ V+ K+++ Sbjct: 61 LDADQVHYASLNRELAQSWPTLTIRKPALPDAAQWKDVEGKFQQL 105 >gi|52857658|gb|AAU89082.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/80 (77%), Positives = 67/80 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNI 80 LE WL +N+EYA P + Sbjct: 61 QNLEKWLGVNAEYAKTXPKL 80 >gi|170723212|ref|YP_001750900.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida W619] gi|169761215|gb|ACA74531.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida W619] Length = 107 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E +L++N+E A WPNIT +K++LP A + DG Sbjct: 61 VPAGMENFLELNAELAEIWPNITERKDALPDAEEWDG 97 >gi|296115139|ref|ZP_06833780.1| ferredoxin [Gluconacetobacter hansenii ATCC 23769] gi|295978240|gb|EFG84977.1| ferredoxin [Gluconacetobacter hansenii ATCC 23769] Length = 110 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVISPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YA WPNIT K ++ P+ A+ K + SP P Sbjct: 61 DRATAWAEINAKYAGVWPNITRKGDA-PADAEEWKDKPNKAELLSPEP 107 >gi|167032191|ref|YP_001667422.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida GB-1] gi|166858679|gb|ABY97086.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida GB-1] Length = 107 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITERKDALPDAEEWDGKTGK 101 >gi|33150233|gb|AAP97087.1| ferredoxin [Pseudomonas chlororaphis] Length = 107 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT KK+SLP A + DGVK K Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKDSLPDAEEWDGVKGK 101 >gi|5305131|emb|CAB46192.1| ferrodoxin [Pseudomonas putida] Length = 107 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/101 (62%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 VPSGMENFIELNAELAEIWPNITERKDALPDAEEWDGKTGK 101 >gi|325277034|ref|ZP_08142695.1| ferredoxin [Pseudomonas sp. TJI-51] gi|324097831|gb|EGB96016.1| ferredoxin [Pseudomonas sp. TJI-51] Length = 107 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/97 (63%), Positives = 77/97 (79%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT +K++LP A + DG Sbjct: 61 VPAGMENFIELNAELAEIWPNITERKDALPDAEEWDG 97 >gi|104783163|ref|YP_609661.1| ferredoxin [Pseudomonas entomophila L48] gi|95112150|emb|CAK16877.1| ferredoxin [Pseudomonas entomophila L48] Length = 107 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT KK++LP A + DG Sbjct: 61 VPAGMENFIELNAELAEIWPNITEKKDALPDAEEWDG 97 >gi|326794018|ref|YP_004311838.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] gi|326544782|gb|ADZ90002.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] Length = 107 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP AI + E Sbjct: 1 MAFIVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPAGAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N + A WPNI +K+ LP AA+ DGV+ K E Sbjct: 61 LPEGQEVFIELNQDLALIWPNIAERKDPLPDAAQWDGVEDKLE 103 >gi|257454098|ref|ZP_05619372.1| ferredoxin-1 [Enhydrobacter aerosaccus SK60] gi|257448576|gb|EEV23545.1| ferredoxin-1 [Enhydrobacter aerosaccus SK60] Length = 107 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NC+ CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCVRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E A +WPNI+ + LP A + DGV K + Sbjct: 61 VPKGQEIYIELNAELAEKWPNISAMHDPLPDAKEWDGVPNKLQ 103 >gi|52857662|gb|AAU89084.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/79 (78%), Positives = 66/79 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPN 79 LE WL +N+EYA P Sbjct: 61 QNLEKWLGVNAEYAKTGPT 79 >gi|330504210|ref|YP_004381079.1| ferredoxin I [Pseudomonas mendocina NK-01] gi|328918496|gb|AEB59327.1| ferredoxin I [Pseudomonas mendocina NK-01] Length = 107 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 63/103 (61%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++LP A + DGVK K + Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALPDAEEWDGVKDKLQ 103 >gi|26988357|ref|NP_743782.1| ferrodoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|148549359|ref|YP_001269461.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida F1] gi|60392274|sp|P0A122|FER1_PSEPK RecName: Full=Ferredoxin 1 gi|60392275|sp|P0A123|FER1_PSEPU RecName: Full=Ferredoxin 1 gi|24983108|gb|AAN67246.1|AE016351_8 ferrodoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|7243294|dbj|BAA92688.1| ferrodoxin [Pseudomonas putida] gi|14646832|dbj|BAB62000.1| [3Fe-4S][4Fe-4S]ferredoxin [Pseudomonas putida] gi|148513417|gb|ABQ80277.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas putida F1] gi|313500208|gb|ADR61574.1| FdxA [Pseudomonas putida BIRD-1] Length = 107 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/97 (63%), Positives = 77/97 (79%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT +K++LP A + DG Sbjct: 61 VPSGMENFIELNAELAEIWPNITERKDALPDAEEWDG 97 >gi|154248128|ref|YP_001419086.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162213|gb|ABS69429.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 110 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 58/83 (69%), Positives = 64/83 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI C + DCV VCPVDCFY GEN L IHPDECIDCGVCEPECP AI PD++ Sbjct: 1 MAYVVTENCIRCTYMDCVSVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAAAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTK 83 P W +N++YA QWPNIT K Sbjct: 61 PRAGDWAALNAQYAAQWPNITEK 83 >gi|152997736|ref|YP_001342571.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Marinomonas sp. MWYL1] gi|150838660|gb|ABR72636.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Marinomonas sp. MWYL1] Length = 107 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP +AI + E Sbjct: 1 MAFIVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E+++++N + + WPNI KK++LP AA+ DGV+ K E Sbjct: 61 LPEDQEVFVELNRDLSLIWPNIAEKKDALPDAAQWDGVEDKLE 103 >gi|52857666|gb|AAU89086.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/74 (82%), Positives = 65/74 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYA 74 LE WL +N+EYA Sbjct: 61 QNLEKWLGVNAEYA 74 >gi|226945907|ref|YP_002800980.1| ferredoxin I [Azotobacter vinelandii DJ] gi|119918|sp|P00214|FER1_AZOVI RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|142304|gb|AAA22125.1| ferredoxin I [Azotobacter vinelandii] gi|226720834|gb|ACO80005.1| Ferredoxin I [Azotobacter vinelandii DJ] Length = 107 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 103 >gi|126667869|ref|ZP_01738835.1| RecA DNA recombination protein [Marinobacter sp. ELB17] gi|126627685|gb|EAZ98316.1| RecA DNA recombination protein [Marinobacter sp. ELB17] Length = 107 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT++VT+NCI CKHTDCVEVCPVDCFYEG NFL I PDECIDC +CEPECPV+AI + E Sbjct: 1 MTFIVTDNCIKCKHTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPVEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++++N++ A +WPNIT KKE++ A K DGV K + Sbjct: 61 LPDNQKVFIELNADLAGKWPNITEKKEAMVDAEKWDGVPDKLQ 103 >gi|90020902|ref|YP_526729.1| RecA DNA recombination protein [Saccharophagus degradans 2-40] gi|89950502|gb|ABD80517.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 107 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV +NCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGDNCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +L++N+E A WPNIT KK++ A + DGV+ K + Sbjct: 61 LPDDQQAFLELNAELAEVWPNITEKKDAPADAEEWDGVEGKLQ 103 >gi|256822660|ref|YP_003146623.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Kangiella koreensis DSM 16069] gi|256796199|gb|ACV26855.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kangiella koreensis DSM 16069] Length = 107 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + D Sbjct: 1 MAFVVTDNCIQCKYTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPAEAIFEEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E + +WPNIT KK+ LP A + DG K E Sbjct: 61 IPAGMEHFIELNAELSEEWPNITEKKDPLPDAEEWDGKPNKLE 103 >gi|114326978|ref|YP_744135.1| ferredoxin [Granulibacter bethesdensis CGDNIH1] gi|114315152|gb|ABI61212.1| ferredoxin [Granulibacter bethesdensis CGDNIH1] Length = 132 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 23 MAYVVTENCIRCKFMDCVEVCPVDCFYVGENMLVIHPDECIDCGVCEPECPAEAIFPDSD 82 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 W + N YA+ WPNIT K E P+ A+ K + FS PG Sbjct: 83 DRATAWAEKNRTYASVWPNITRKGEP-PADAEEWKDKPGKAELFSTEPG 130 >gi|70728590|ref|YP_258339.1| ferredoxin [Pseudomonas fluorescens Pf-5] gi|68342889|gb|AAY90495.1| ferredoxin [Pseudomonas fluorescens Pf-5] Length = 107 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT KK+ LP A + DGVK K Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGK 101 >gi|46371302|gb|AAS90417.1| ferredoxin A [Azotobacter chroococcum] Length = 107 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N++ A WPNIT KKE+L A DGVK K + Sbjct: 61 VPEDMQEFIQMNADLAEVWPNITEKKEALSDAEDWDGVKGKLQ 103 >gi|87122438|ref|ZP_01078318.1| ferredoxin I [Marinomonas sp. MED121] gi|86162231|gb|EAQ63516.1| ferredoxin I [Marinomonas sp. MED121] Length = 107 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPASAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E ++++N++ A WPNIT KK++L AA DGV+ K E Sbjct: 61 LPEDQEHFVELNADLANVWPNITEKKDALADAATWDGVEDKLE 103 >gi|157831121|pdb|1FRH|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 YVVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AYVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|146281878|ref|YP_001172031.1| ferredoxin I [Pseudomonas stutzeri A1501] gi|147744561|sp|P08811|FER_PSEST RecName: Full=Ferredoxin 1 gi|145570083|gb|ABP79189.1| ferredoxin I [Pseudomonas stutzeri A1501] gi|327480121|gb|AEA83431.1| ferredoxin I [Pseudomonas stutzeri DSM 4166] Length = 107 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++L A + DGVK K + Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ 103 >gi|50250469|emb|CAH03855.1| Ferredoxin I [Pseudomonas stutzeri] Length = 106 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/112 (58%), Positives = 81/112 (72%), Gaps = 8/112 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + ++++N++ A WPNIT KK++L A + DGVK K + PGG Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ------PGG 106 >gi|229588702|ref|YP_002870821.1| ferredoxin I [Pseudomonas fluorescens SBW25] gi|37930233|gb|AAP76284.1| unknown [Pseudomonas sp. PCL1171] gi|229360568|emb|CAY47425.1| ferredoxin I [Pseudomonas fluorescens SBW25] Length = 107 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT +K+ +P AA+ DG K K Sbjct: 61 VPAEMQEFIQLNVELAEIWPNITERKDPMPDAAEWDGKKGK 101 >gi|142307|gb|AAA16869.1| fdxA [Azotobacter vinelandii] gi|20455804|gb|AAM22287.1| ferredoxin A [Azotobacter vinelandii] Length = 107 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEP CP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPRCPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 103 >gi|52857654|gb|AAU89080.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/74 (81%), Positives = 65/74 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYA 74 LE WL +++EYA Sbjct: 61 QNLEKWLGVSAEYA 74 >gi|58257339|gb|AAK30050.2| ferredoxin [Pseudomonas fluorescens] Length = 107 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/101 (60%), Positives = 77/101 (76%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV++CPVDCFY+G NFL IHPDECIDC +CEP CP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVKICPVDCFYKGPNFLVIHPDECIDCALCEPRCPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 P ++ ++++N E A WPNIT KK+ LP A + DGVK K Sbjct: 61 VPPDMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGK 101 >gi|329896375|ref|ZP_08271474.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC3088] gi|328921795|gb|EGG29166.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC3088] Length = 107 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCINCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++L++N+E A WPNIT K++LP A + G K Sbjct: 61 LPEDQQVFLELNAELAEIWPNITEMKDALPDAEEWAGKSNKL 102 >gi|304310610|ref|YP_003810208.1| FDX ferredoxin [gamma proteobacterium HdN1] gi|301796343|emb|CBL44551.1| FDX ferredoxin [gamma proteobacterium HdN1] Length = 107 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+E A +WPNIT KK+ LP A + DG K Sbjct: 61 VPDDQQQFIPLNAELAEKWPNITEKKDPLPEAKEWDGKPDK 101 >gi|157830133|pdb|1AXQ|A Chain A, Ferricyanide Oxidized Fdi gi|157831044|pdb|1FDA|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|157831045|pdb|1FDB|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|157831059|pdb|1FER|A Chain A, Structure At Ph 6.5 Of Ferredoxin I From Azotobacter Vinelandii At 2.3 Angstroms Resolution gi|157837034|pdb|5FD1|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|225734355|pdb|6FD1|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii Low Temperature, 1.35 A Length = 106 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|37927460|pdb|1PC4|A Chain A, Crystal Structure Of The P50a Mutant Of Ferredoxin I At 1.65 A Resolution Length = 107 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPEC AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECAAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 103 >gi|157884757|pdb|6FDR|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii At 100k, Na Dithionite Reduced At Ph 8.5, Resolution 1.4 A gi|157884763|pdb|7FD1|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii At Ph 8.5, 100 K, 1.35 A gi|157884764|pdb|7FDR|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii, Na Dithionite Reduced, Ph 8.5, 1.4a Resolution, 100 K Length = 106 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|119504839|ref|ZP_01626917.1| RecA DNA recombination protein [marine gamma proteobacterium HTCC2080] gi|119459444|gb|EAW40541.1| RecA DNA recombination protein [marine gamma proteobacterium HTCC2080] Length = 107 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP+DAI + E Sbjct: 1 MTFVVGEDCINCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPIDAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E +L +N+E A WPNIT KK +L A G K Sbjct: 61 LPAGQEQFLALNTELADIWPNITEKKPALEDAEAWTGKSDKL 102 >gi|91983730|gb|ABE68871.1| FdxA [Pseudomonas sp. P97.26] Length = 104 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 2/94 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPT 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT +K++LP AA+ DG Sbjct: 61 GMENFIELNAELADIWPNITERKDALPDAAEWDG 94 >gi|9256973|pdb|1F5B|A Chain A, Crystal Structure Of F2h Ferredoxin 1 Mutant From Azotobacter Vinelandii At 1.75 Angstrom Resolution Length = 106 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AHVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|91983680|gb|ABE68846.1| FdxA [Pseudomonas sp. F113] Length = 104 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/98 (63%), Positives = 77/98 (78%), Gaps = 2/98 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGK 98 >gi|91983712|gb|ABE68862.1| FdxA [Pseudomonas sp. Q12-87] Length = 104 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/100 (62%), Positives = 78/100 (78%), Gaps = 2/100 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLK 100 >gi|307546338|ref|YP_003898817.1| ferredoxin [Halomonas elongata DSM 2581] gi|307218362|emb|CBV43632.1| K05524 ferredoxin [Halomonas elongata DSM 2581] Length = 107 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 64/103 (62%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +++IN+E + WPNIT KK+ A + DG K E Sbjct: 61 LPEGQEQFIEINAELSETWPNITEKKDPPEDAEEWDGKTGKLE 103 >gi|91983682|gb|ABE68847.1| FdxA [Pseudomonas sp. Q65c-80] gi|91983716|gb|ABE68864.1| FdxA [Pseudomonas sp. TM1A3] gi|91983718|gb|ABE68865.1| FdxA [Pseudomonas sp. C*1A1] gi|91983720|gb|ABE68866.1| FdxA [Pseudomonas sp. TM1B2] gi|91983732|gb|ABE68872.1| FdxA [Pseudomonas sp. K93.3] gi|91983734|gb|ABE68873.1| FdxA [Pseudomonas sp. P96.25] Length = 104 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/100 (62%), Positives = 78/100 (78%), Gaps = 2/100 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLK 100 >gi|37927462|pdb|1PC5|A Chain A, Crystal Structure Of The P50g Mutant Of Ferredoxin I At 1.8 A Resolution Length = 107 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPEC AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECGAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 103 >gi|120555004|ref|YP_959355.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinobacter aquaeolei VT8] gi|120324853|gb|ABM19168.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Marinobacter aquaeolei VT8] Length = 107 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MAFIVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G E +++IN+E A +WPNIT KK+ LP A + DG K Sbjct: 61 LPAGQEAFVEINAELAGKWPNITEKKDPLPDAEEWDGKPDK 101 >gi|12084520|pdb|1GAO|A Chain A, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084521|pdb|1GAO|B Chain B, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084522|pdb|1GAO|C Chain C, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084523|pdb|1GAO|D Chain D, Crystal Structure Of The L44s Mutant Of Ferredoxin I Length = 106 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCASCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|92112753|ref|YP_572681.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91795843|gb|ABE57982.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 107 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E + WPNI+ KK+ LP A + DG K + Sbjct: 61 LPDDQKAFIELNAELSEVWPNISEKKDPLPDAEEWDGKTDKLQ 103 >gi|2098504|pdb|1FTC|A Chain A, Y13c Mutant Of Azotobacter Vinelandii Fdi gi|2098505|pdb|1FTC|B Chain B, Y13c Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKXTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|296932695|gb|ADH93501.1| ferredoxin I [Pseudomonas sp. In5] Length = 104 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/98 (65%), Positives = 75/98 (76%), Gaps = 2/98 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPE 60 Query: 64 EL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT KKES+P A + DGVK K Sbjct: 61 EMQEFIQLNVELAEIWPNITEKKESMPDAEEWDGVKGK 98 >gi|361779|prf||1410240A ferredoxin Length = 106 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 T+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 TFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++L A + DGVK K + Sbjct: 61 PEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ 102 >gi|91983710|gb|ABE68861.1| FdxA [Pseudomonas sp. Q13-87] gi|91983726|gb|ABE68869.1| FdxA [Pseudomonas sp. Q7-87] Length = 104 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/94 (64%), Positives = 75/94 (79%), Gaps = 2/94 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT KK++LP A + DG Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDG 94 >gi|157831125|pdb|1FRL|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPD CIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDSCIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|148260834|ref|YP_001234961.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|326404228|ref|YP_004284310.1| ferredoxin [Acidiphilium multivorum AIU301] gi|146402515|gb|ABQ31042.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] gi|325051090|dbj|BAJ81428.1| ferredoxin [Acidiphilium multivorum AIU301] Length = 110 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 57/83 (68%), Positives = 64/83 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE+CI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTESCIKCKYMDCVEVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTK 83 + W+ N E A WPNIT K Sbjct: 61 AKADAWIDQNRELAALWPNITRK 83 >gi|157872416|pdb|1D3W|A Chain A, Crystal Structure Of Ferredoxin 1 D15e Mutant From Azotobacter Vinelandii At 1.7 Angstrom Resolution Length = 106 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T+CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTECVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|157831122|pdb|1FRI|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPV+CFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVNCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|157831046|pdb|1FDD|A Chain A, Azotobacter Vinelandii Ferredoxin I: Aspartate 15 Facilitates Proton Transfer To The Reduced [3fe-4s] Cluster Length = 106 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T+CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTNCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|121998437|ref|YP_001003224.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Halorhodospira halophila SL1] gi|121589842|gb|ABM62422.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Halorhodospira halophila SL1] Length = 107 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + D Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIYSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P +E +L++N+E A +WP IT KK+ P A + DG K + Sbjct: 61 LPPSMEHFLELNAELAQKWPLITEKKDPPPDAEEWDGKPDKLQ 103 >gi|157831126|pdb|1FRM|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +C PECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCAPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|46371298|gb|AAS90414.1| ferredoxin A [Azomonas macrocytogenes] Length = 107 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVRPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N++ A WPNIT KKE+L A DGVK K + Sbjct: 61 VPEDMQEFIQLNADLAEVWPNITEKKEALSDAEDWDGVKGKLQ 103 >gi|88798288|ref|ZP_01113874.1| ferrodoxin, 4Fe-4S [Reinekea sp. MED297] gi|88779064|gb|EAR10253.1| ferrodoxin, 4Fe-4S [Reinekea sp. MED297] Length = 107 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/101 (60%), Positives = 77/101 (76%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV ENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MAFVVIENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAILSEDE 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 P ++ ++++N+E A WPNIT +K+ LP A + +GV K Sbjct: 61 VPADQIDFIELNAELAEVWPNITEQKDPLPDADEQNGVPNK 101 >gi|91983686|gb|ABE68849.1| FdxA [Pseudomonas sp. PITR2] Length = 104 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 2/98 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPT 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKTGK 98 >gi|157831123|pdb|1FRJ|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDC YEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCIYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|330993479|ref|ZP_08317414.1| Ferredoxin-2 [Gluconacetobacter sp. SXCC-1] gi|329759509|gb|EGG76018.1| Ferredoxin-2 [Gluconacetobacter sp. SXCC-1] Length = 107 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 1/105 (0%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +VTENCI CK TDCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MVTENCIRCKFTDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSDDRA 60 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W ++N++YA WPNIT K ++ P+ A+ K ++ SP P Sbjct: 61 TPWAELNAKYAAVWPNITRKLDA-PADAEEWKDKPNKKELLSPEP 104 >gi|157831043|pdb|1FD2|A Chain A, Site-Directed Mutagenesis Of Azotobacter Vinelandii Ferredoxin I. (Fe-S) Cluster-Driven Protein Rearrangement Length = 106 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVAPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|157834956|pdb|2FD2|A Chain A, Crystallographic Analysis Of Two Site-Directed Mutants Of Azotobacter Vinelandii Ferredoxin Length = 106 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVD FYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDAFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|11513606|pdb|1G6B|A Chain A, Crystal Structure Of P47s Mutant Of Ferredoxin I Length = 106 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CE ECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCESECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|11514021|pdb|1G3O|A Chain A, Crystal Structure Of V19e Mutant Of Ferredoxin I Length = 106 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVE CPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEECPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|157829710|pdb|1A6L|A Chain A, T14c Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+ DCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYCDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|157831128|pdb|1FRX|A Chain A, Structure And Properties Of C20s Fdi Mutant Length = 106 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVSPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|6980482|pdb|1B0V|A Chain A, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980483|pdb|1B0V|B Chain B, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980484|pdb|1B0V|C Chain C, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980485|pdb|1B0V|D Chain D, I40n Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDEC DC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECNDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|319786641|ref|YP_004146116.1| hypothetical protein Psesu_1035 [Pseudoxanthomonas suwonensis 11-1] gi|317465153|gb|ADV26885.1| hypothetical protein Psesu_1035 [Pseudoxanthomonas suwonensis 11-1] Length = 107 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E + WP IT +KE LP AA+ DG K + Sbjct: 61 VPAGQEGFVALNAELSRAWPVITVRKEPLPDAAEWDGKGDKLK 103 >gi|9256974|pdb|1F5C|A Chain A, Crystal Structure Of F25h Ferredoxin 1 Mutant From Azotobacter Vinelandii At 1.75 Angstrom Resolution Length = 106 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDC YEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCHYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|254499063|ref|ZP_05111755.1| ferredoxin II (4Fe-4S) [Legionella drancourtii LLAP12] gi|254351690|gb|EET10533.1| ferredoxin II (4Fe-4S) [Legionella drancourtii LLAP12] Length = 109 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + D Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A +W NIT KK++ P A + VK K + Sbjct: 61 LTDEQQQFKELNAELAQKWSNITAKKDAPPDAKDWEDVKDKLQ 103 >gi|157831124|pdb|1FRK|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|91983728|gb|ABE68870.1| FdxA [Pseudomonas sp. P97.6] Length = 104 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 2/94 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G E ++++N+E A WPNIT KK++LP A + DG Sbjct: 61 GQENFIELNAELADIWPNITEKKDALPDAEEWDG 94 >gi|54297846|ref|YP_124215.1| hypothetical protein lpp1898 [Legionella pneumophila str. Paris] gi|53751631|emb|CAH13050.1| hypothetical protein lpp1898 [Legionella pneumophila str. Paris] Length = 111 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + D Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + K+N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTEEQQQFKKLNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|10120847|pdb|1FF2|A Chain A, Crystal Structure Of The C42d Mutant Of Azotobacter Vinelandii 7fe Ferredoxin (Fdi) Length = 106 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECID +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDDALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQ 102 >gi|91983674|gb|ABE68843.1| FdxA [Pseudomonas protegens] gi|91983704|gb|ABE68858.1| FdxA [Pseudomonas protegens] gi|91983706|gb|ABE68859.1| FdxA [Pseudomonas sp. K94.41] gi|91983708|gb|ABE68860.1| FdxA [Pseudomonas sp. S8-62] gi|91983722|gb|ABE68867.1| FdxA [Pseudomonas protegens] gi|91983724|gb|ABE68868.1| FdxA [Pseudomonas protegens] Length = 104 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/98 (64%), Positives = 74/98 (75%), Gaps = 2/98 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPE 60 Query: 64 EL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E+ ++++N E A WPNIT KK+ LP A + DGVK K Sbjct: 61 EMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGK 98 >gi|239948395|ref|ZP_04700148.1| ferredoxin [Rickettsia endosymbiont of Ixodes scapularis] gi|239922671|gb|EER22695.1| ferredoxin [Rickettsia endosymbiont of Ixodes scapularis] Length = 109 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/107 (57%), Positives = 77/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCIPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT KK +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKDKFNKYIN 106 >gi|6729695|pdb|1B0T|A Chain A, D15kK84D MUTANT OF AZOTOBACTER VINELANDII FDI Length = 106 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTKCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N+E A WPNIT K+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEDKDPLPDAEDWDGVKGKLQ 102 >gi|149374516|ref|ZP_01892290.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] gi|149361219|gb|EDM49669.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] Length = 107 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P ++ ++++N++ A +WPNIT KK+ LP A + DG K + Sbjct: 61 LPADQVQFVELNADLAGKWPNITEKKDPLPEAEEWDGKPDKLQ 103 >gi|91983678|gb|ABE68845.1| FdxA [Pseudomonas sp. PILH1] Length = 104 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 2/98 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E ++++N+E A WPNIT KK+ +P A + DG K Sbjct: 61 GMENFIELNAELADVWPNITEKKDPMPGAEEWDGKTGK 98 >gi|21231193|ref|NP_637110.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768799|ref|YP_243561.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|188991913|ref|YP_001903923.1| hypothetical protein xccb100_2518 [Xanthomonas campestris pv. campestris str. B100] gi|21112835|gb|AAM41034.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574131|gb|AAY49541.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|167733673|emb|CAP51878.1| fdx [Xanthomonas campestris pv. campestris] Length = 107 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHAGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTVRQEPLPDAAEWDGKPDKL 102 >gi|254282951|ref|ZP_04957919.1| RecA DNA recombination protein [gamma proteobacterium NOR51-B] gi|219679154|gb|EED35503.1| RecA DNA recombination protein [gamma proteobacterium NOR51-B] Length = 107 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E A WPNIT KK+ P A G K + Sbjct: 61 LPADQTEFMELNAELADIWPNITEKKDPPPDAEDWAGKPDKLQ 103 >gi|86157959|ref|YP_464744.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|197122738|ref|YP_002134689.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|220917521|ref|YP_002492825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|85774470|gb|ABC81307.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|196172587|gb|ACG73560.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|219955375|gb|ACL65759.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 107 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDCG CEP CP AI P+ Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCGACEPACPTKAIFPEES 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 + ++++NSE + WPNIT KK+ LP A + V++K +K Sbjct: 61 LPAKWNEYVQLNSELSKAWPNITEKKDPLPEAEEWKDVEEKRDK 104 >gi|9622249|gb|AAF89693.1|AF170100_1 ferredoxin A [Pseudomonas aeruginosa] Length = 107 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI + CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIQVQIHHCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHL 105 >gi|296107515|ref|YP_003619216.1| ferredoxin II (4Fe-4S) [Legionella pneumophila 2300/99 Alcoy] gi|295649417|gb|ADG25264.1| ferredoxin II (4Fe-4S) [Legionella pneumophila 2300/99 Alcoy] Length = 111 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + D Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTDEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|52842141|ref|YP_095940.1| ferredoxin II (4Fe-4S) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294810|ref|YP_127225.1| hypothetical protein lpl1887 [Legionella pneumophila str. Lens] gi|52629252|gb|AAU27993.1| ferredoxin II (4Fe-4S) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53754642|emb|CAH16126.1| hypothetical protein lpl1887 [Legionella pneumophila str. Lens] Length = 111 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + D Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTEEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|289669666|ref|ZP_06490741.1| ferredoxin [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 107 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +T ++E+LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEALPDAAEWDGKPNKL 102 >gi|270157017|ref|ZP_06185674.1| ferredoxin-1 [Legionella longbeachae D-4968] gi|289164568|ref|YP_003454706.1| ferredoxin [Legionella longbeachae NSW150] gi|269989042|gb|EEZ95296.1| ferredoxin-1 [Legionella longbeachae D-4968] gi|288857741|emb|CBJ11585.1| putative ferredoxin [Legionella longbeachae NSW150] Length = 109 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/103 (57%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHP+ECIDC +CEPECPV+AI + D Sbjct: 1 MTFVVTESCIKCKYTDCVEVCPVDCFYEGPNFLVIHPEECIDCALCEPECPVNAIVSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P + + ++N++ + WPNIT+KK++ A + VK K + Sbjct: 61 LTPEQQQFKELNAKLSKNWPNITSKKDAPADAKDWEEVKDKLQ 103 >gi|190571735|ref|YP_001976093.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019223|ref|ZP_03335030.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190358007|emb|CAQ55475.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995332|gb|EEB55973.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 125 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/126 (53%), Positives = 80/126 (63%), Gaps = 17/126 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 59 TEPGLEL--------------WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + LEL + IN EY+ +WPNIT KK+SL +A + K K YF Sbjct: 61 IKDILELDEGLLNNEQKIFKSFYNINVEYSQKWPNITAKKQSLDTAEEYKEKKDK-TAYF 119 Query: 105 SPNPGG 110 N G Sbjct: 120 DENLGS 125 >gi|285017975|ref|YP_003375686.1| ferredoxin protein [Xanthomonas albilineans GPE PC73] gi|283473193|emb|CBA15699.1| putative ferredoxin protein [Xanthomonas albilineans] Length = 107 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHAGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +TT++E L AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTTRQEPLADAAEWDGKPNKL 102 >gi|91983714|gb|ABE68863.1| FdxA [Pseudomonas sp. Q128-87] Length = 104 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/97 (60%), Positives = 75/97 (77%), Gaps = 2/97 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 4 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 63 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 64 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLK 100 >gi|311693936|gb|ADP96809.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [marine bacterium HP15] Length = 119 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/103 (57%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 13 MAFIVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 72 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P ++ ++++N++ A +WPNIT KK+ LP A + DG K + Sbjct: 73 LPADQVQFVELNADLAAKWPNITEKKDPLPDAEEWDGKPNKLQ 115 >gi|91983694|gb|ABE68853.1| FdxA [Pseudomonas sp. K94.37] Length = 101 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 NFIELNAELAEIWPNITEKKDALPDAEEWDGKEGK 95 >gi|157826297|ref|YP_001494017.1| ferredoxin [Rickettsia akari str. Hartford] gi|157800255|gb|ABV75509.1| Ferredoxin [Rickettsia akari str. Hartford] Length = 109 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT K +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKNKPALPDADKFKDEKNKFNKYIN 106 >gi|91983698|gb|ABE68855.1| FdxA [Pseudomonas sp. P97.30] gi|91983700|gb|ABE68856.1| FdxA [Pseudomonas sp. K94.31] Length = 101 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGK 95 >gi|91983672|gb|ABE68842.1| FdxA [Pseudomonas protegens] Length = 103 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/97 (63%), Positives = 73/97 (75%), Gaps = 2/97 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E E Sbjct: 1 VTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPEE 60 Query: 65 L--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++++N E A WPNIT KK+ LP A + DGVK K Sbjct: 61 MQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGK 97 >gi|15604660|ref|NP_221178.1| ferredoxin (fdxA) [Rickettsia prowazekii str. Madrid E] gi|6647508|sp|Q9ZCC8|FER_RICPR RecName: Full=Ferredoxin gi|3861355|emb|CAA15254.1| FERREDOXIN (fdxA) [Rickettsia prowazekii] gi|292572488|gb|ADE30403.1| Ferredoxin [Rickettsia prowazekii Rp22] Length = 109 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P L W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 60 PELIEWVERAKDFIENHGWKNITKKKCALPGADKFKDEKDKFNKYI 105 >gi|91983684|gb|ABE68848.1| FdxA [Pseudomonas sp. CM1A2] Length = 103 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 3 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 62 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 63 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGK 97 >gi|51473997|ref|YP_067754.1| ferredoxin [Rickettsia typhi str. Wilmington] gi|81692331|sp|Q68Y04|FER_RICTY RecName: Full=Ferredoxin gi|51460309|gb|AAU04272.1| ferredoxin [Rickettsia typhi str. Wilmington] Length = 110 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 3/109 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYIVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 P L W++ ++ W NIT KK +LP A K + K+ KY N Sbjct: 60 PELIEWVERAKDFIENQGWKNITKKKCALPDADKFKDEQDKFNKYIIKN 108 >gi|166711847|ref|ZP_02243054.1| ferredoxin [Xanthomonas oryzae pv. oryzicola BLS256] gi|289662698|ref|ZP_06484279.1| ferredoxin [Xanthomonas campestris pv. vasculorum NCPPB702] gi|325924485|ref|ZP_08186004.1| ferredoxin [Xanthomonas gardneri ATCC 19865] gi|325544980|gb|EGD16315.1| ferredoxin [Xanthomonas gardneri ATCC 19865] Length = 107 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEPLPDAAEWDGKPNKL 102 >gi|194365291|ref|YP_002027901.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348095|gb|ACF51218.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Stenotrophomonas maltophilia R551-3] Length = 107 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CKHTDCVEVCPVDCF+EG NFL I PDECIDC +CEPECPV+AI P D Sbjct: 1 MPFVVTENCIKCKHTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPVNAIFPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E A +WP +T +K+ A + DG K + Sbjct: 61 VPAGQESFVALNAELAKEWPVLTVRKDPPADAGEWDGKPDKLK 103 >gi|91983676|gb|ABE68844.1| FdxA [Pseudomonas sp. Q2-87] Length = 104 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 4 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 63 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++N+E A WPNIT KK++LP A + DG K Sbjct: 64 NFIELNAELADIWPNITEKKDALPDAEEWDGKPGK 98 >gi|1589261|prf||2210388A ferredoxin:ISOTYPE=II Length = 104 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 74/109 (67%), Gaps = 12/109 (11%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVC PECP +AI Sbjct: 2 YVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCNPECPAEAIAGK---- 57 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK--YFSPNPG 109 WL+IN ++A WPNIT K P+ A D K K +K S NPG Sbjct: 58 ---WLEINRKFADLWPNITRKG---PALADADDWKDKPDKTGLLSENPG 100 >gi|190573755|ref|YP_001971600.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] gi|254523787|ref|ZP_05135842.1| ferredoxin [Stenotrophomonas sp. SKA14] gi|190011677|emb|CAQ45296.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] gi|219721378|gb|EED39903.1| ferredoxin [Stenotrophomonas sp. SKA14] Length = 107 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CKHTDCVEVCPVDCF+EG NFL I PDECIDC +CEPECPV+AI P D Sbjct: 1 MPFVVTENCIKCKHTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPVNAIFPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E A +WP +T +K+ A + DG K + Sbjct: 61 VPAGQEGFVALNAELAKEWPVLTVRKDPPADAGEWDGKPDKLK 103 >gi|325917219|ref|ZP_08179445.1| ferredoxin [Xanthomonas vesicatoria ATCC 35937] gi|325536560|gb|EGD08330.1| ferredoxin [Xanthomonas vesicatoria ATCC 35937] Length = 107 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +T ++E LP AA DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEPLPDAADWDGKPNKL 102 >gi|67459707|ref|YP_247331.1| ferredoxin [Rickettsia felis URRWXCal2] gi|75535902|sp|Q4UJX3|FER_RICFE RecName: Full=Ferredoxin gi|67005240|gb|AAY62166.1| Ferredoxin [Rickettsia felis URRWXCal2] Length = 109 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + C+ CK+TDCV+VCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVNDECVKCKYTDCVDVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT KK +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKNKFNKYIN 106 >gi|220934455|ref|YP_002513354.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995765|gb|ACL72367.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 107 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/107 (58%), Positives = 76/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VV ENCI CK+TDCVEVCPVDCF+EG NFL I P+ECIDC +CEPECP +AI P D Sbjct: 1 MTFVVIENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPEECIDCTLCEPECPAEAIVPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 G E +L++N+E + QWP ITT+KE A + DG K KY Sbjct: 61 IPEGQEDFLELNAELSRQWPVITTRKEPPADAEEWDGKPDKL-KYLE 106 >gi|91206087|ref|YP_538442.1| ferredoxin [Rickettsia bellii RML369-C] gi|157826613|ref|YP_001495677.1| ferredoxin [Rickettsia bellii OSU 85-389] gi|122425218|sp|Q1RH11|FER_RICBR RecName: Full=Ferredoxin gi|91069631|gb|ABE05353.1| Ferredoxin [Rickettsia bellii RML369-C] gi|157801917|gb|ABV78640.1| Ferredoxin [Rickettsia bellii OSU 85-389] Length = 107 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP+T Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPET- 59 Query: 61 PGLELWLKINSEYA--TQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ + +W IT KK +LP A K K K+ KY Sbjct: 60 PELIEWVERAKHFIEHEKWQVITKKKPALPDADKFKDEKDKFNKYIG 106 >gi|1169669|sp|P80448|FER2_RHORU RecName: Full=Ferredoxin-2; AltName: Full=Ferredoxin II; Short=FdII Length = 106 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 66/109 (60%), Positives = 74/109 (67%), Gaps = 12/109 (11%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVC PECP +AI Sbjct: 2 YVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCNPECPAEAIAGK---- 57 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK--YFSPNPG 109 WL+IN ++A WPNIT K P+ A D K K +K S NPG Sbjct: 58 ---WLEINRKFADLWPNITRKG---PALADADDWKDKPDKTGLLSENPG 100 >gi|148284852|ref|YP_001248942.1| ferredoxin [Orientia tsutsugamushi str. Boryong] gi|146740291|emb|CAM80671.1| Ferredoxin [Orientia tsutsugamushi str. Boryong] Length = 106 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT++C+ CK+TDCVEVCPVDCF+EGE + I P++CIDCGVCE ECPV AIKP+ E Sbjct: 1 MTYVVTDSCVKCKYTDCVEVCPVDCFHEGEMMVVIDPEKCIDCGVCEAECPVGAIKPEAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ W+++ E++ +WP I KK LP A K+EKY Sbjct: 61 ELIK-WIELGQEFSKKWPQILHKKAPLPQADLYKDKTNKFEKY 102 >gi|21242508|ref|NP_642090.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|78047349|ref|YP_363524.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294626612|ref|ZP_06705209.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666343|ref|ZP_06731591.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927274|ref|ZP_08188530.1| ferredoxin [Xanthomonas perforans 91-118] gi|21107958|gb|AAM36626.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|78035779|emb|CAJ23470.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292599032|gb|EFF43172.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603892|gb|EFF47295.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325542350|gb|EGD13836.1| ferredoxin [Xanthomonas perforans 91-118] Length = 107 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +T ++E P AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTVRQEPAPDAAEWDGKPNKL 102 >gi|189184160|ref|YP_001937945.1| ferredoxin [Orientia tsutsugamushi str. Ikeda] gi|189180931|dbj|BAG40711.1| ferredoxin [Orientia tsutsugamushi str. Ikeda] Length = 106 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT++C+ CK+TDCVEVCPVDCF+EGE + I P++CIDCGVCE ECPV AIKP+ E Sbjct: 1 MTYVVTDSCVKCKYTDCVEVCPVDCFHEGEMMVVIDPEKCIDCGVCEAECPVGAIKPEAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ W+++ E++ +WP I KK LP A K+EKY Sbjct: 61 ELIK-WIELGQEFSKKWPQILHKKAPLPQADLYKDETNKFEKY 102 >gi|307824341|ref|ZP_07654567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] gi|307734721|gb|EFO05572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] Length = 107 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK TDCV+VCPVDCF+EG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKFTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIFAEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++ +N+E A QWP IT K +LP A + +G + K + Sbjct: 61 LPEGQEVFIALNAELAKQWPVITDVKPALPEADEWNGKEGKLD 103 >gi|157829118|ref|YP_001495360.1| ferredoxin [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933842|ref|YP_001650631.1| ferredoxin [Rickettsia rickettsii str. Iowa] gi|157801599|gb|ABV76852.1| ferredoxin [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908929|gb|ABY73225.1| ferredoxin [Rickettsia rickettsii str. Iowa] Length = 116 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 7/111 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYIG 110 >gi|15893206|ref|NP_360920.1| ferredoxin [Rickettsia conorii str. Malish 7] gi|81774396|sp|Q92G41|FER_RICCN RecName: Full=Ferredoxin gi|15620421|gb|AAL03821.1| ferredoxin [Rickettsia conorii str. Malish 7] Length = 116 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 7/111 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYIG 110 >gi|91983690|gb|ABE68851.1| FdxA [Pseudomonas sp. P12] Length = 101 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 2/95 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++ +N+E A WPNIT KK++LP A + DG + K Sbjct: 61 NFIVLNAELAEIWPNITEKKDALPDAEEWDGKEGK 95 >gi|114320642|ref|YP_742325.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227036|gb|ABI56835.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 107 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + D Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIYSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +L +N+E A +WP IT +K+ A + DG K E Sbjct: 61 LPAGQEEFLALNAELAQEWPVITEQKDPPEDADEWDGKPNKLE 103 >gi|253996373|ref|YP_003048437.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera mobilis JLW8] gi|253983052|gb|ACT47910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera mobilis JLW8] Length = 107 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI + D Sbjct: 1 MTYVVTENCIQCKFTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+ A WP IT +KE+LP A M+G K Sbjct: 61 VPADQQEYIALNARLAQVWPTITARKEALPDAEAMNGAPNK 101 >gi|108762705|ref|YP_631259.1| ferrodoxin, 4Fe-4S [Myxococcus xanthus DK 1622] gi|108466585|gb|ABF91770.1| ferrodoxin, 4Fe-4S [Myxococcus xanthus DK 1622] Length = 111 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 5/113 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV + CI CK+TDCVEVCPV+CFYEG NFL IHPDECIDCG CEP CP AI P+TE Sbjct: 1 MAYVVADPCIKCKYTDCVEVCPVNCFYEGANFLVIHPDECIDCGACEPVCPTKAIFPETE 60 Query: 61 PGLELWLK---INSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 E W + +N++ +T+WPNI KK +LP A + K P PG Sbjct: 61 LP-EQWKEYKALNADLSTKWPNIAEKKSALPEAEEFKS-KDGKRSLLDPAPGS 111 >gi|58582544|ref|YP_201560.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624429|ref|YP_451801.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58427138|gb|AAW76175.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368369|dbj|BAE69527.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 107 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E + WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELSKVWPVLTVRQEPLPDAAEWDGKPNKL 102 >gi|157804217|ref|YP_001492766.1| ferredoxin [Rickettsia canadensis str. McKiel] gi|157785480|gb|ABV73981.1| Ferredoxin [Rickettsia canadensis str. McKiel] Length = 114 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGELMLVINPDECIDCGVCIPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P L W++ ++ W NIT K+ +L A K K K+ KY Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKRPALTDADKFKDEKDKFNKYM 105 >gi|157964977|ref|YP_001499801.1| ferredoxin [Rickettsia massiliae MTU5] gi|157844753|gb|ABV85254.1| Ferredoxin [Rickettsia massiliae MTU5] Length = 116 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 7/111 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKDKFNKYIG 110 >gi|91983696|gb|ABE68854.1| FdxA [Pseudomonas sp. K93.2] gi|117573334|gb|ABK40843.1| ferredoxin [Pseudomonas sp. K94.38] Length = 99 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 IELNAELAEIWPNITEKKDALPDAEEWDGKEGK 93 >gi|117573304|gb|ABK40828.1| ferredoxin [Pseudomonas sp. C6-16] gi|117573310|gb|ABK40831.1| ferredoxin [Pseudomonas sp. C6-9] gi|117573314|gb|ABK40833.1| ferredoxin [Pseudomonas sp. S7-29] gi|117573316|gb|ABK40834.1| ferredoxin [Pseudomonas sp. S7-42] gi|117573318|gb|ABK40835.1| ferredoxin [Pseudomonas sp. S7-46] gi|117573320|gb|ABK40836.1| ferredoxin [Pseudomonas sp. S7-52] gi|117573326|gb|ABK40839.1| ferredoxin [Pseudomonas sp. S8-151] gi|117573328|gb|ABK40840.1| ferredoxin [Pseudomonas sp. C6-11] Length = 99 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKEGK 93 >gi|91983692|gb|ABE68852.1| FdxA [Pseudomonas sp. F96.27] gi|91983702|gb|ABE68857.1| FdxA [Pseudomonas sp. P97.38] Length = 101 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGQE 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDG 95 ++++N+E A WPNIT KK++LP A + DG Sbjct: 61 NFIELNAELADIWPNITEKKDALPDAEEWDG 91 >gi|42520002|ref|NP_965917.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila melanogaster] gi|99035924|ref|ZP_01314971.1| hypothetical protein Wendoof_01000179 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|42409739|gb|AAS13851.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila melanogaster] Length = 124 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + +L+ IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 IKDILELDEELLSSEQKTFKLFYDINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|58584826|ref|YP_198399.1| ferredoxin [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419142|gb|AAW71157.1| Ferredoxin [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 124 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/123 (54%), Positives = 79/123 (64%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 59 TEPGLEL--------------WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + LEL + IN EY+ +WPNIT KK+ L +A K K K YF Sbjct: 61 IKDILELDEELLSNEQKTFKSFYNINIEYSQKWPNITAKKQPLHTAEKYKEKKDK-TAYF 119 Query: 105 SPN 107 + N Sbjct: 120 NEN 122 >gi|187729714|ref|YP_001837303.1| ferredoxin-like protein [Acidithiobacillus caldus] gi|167782099|gb|ACA00170.1| ferredoxin-like protein [Acidithiobacillus caldus] Length = 107 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NC+ CK+ DCV+VCPVDCF+EG+NFL I P CIDCGVCEPECP AI D++ Sbjct: 1 MTYVVTDNCVNCKYMDCVDVCPVDCFHEGKNFLVIDPSVCIDCGVCEPECPASAIYKDSD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E +L IN + ++ WP I KK+ LP A K DG+ K Sbjct: 61 LPDEFVAYLDINKKLSSSWPLIKYKKDELPEAHKWDGIPNK 101 >gi|117573340|gb|ABK40846.1| ferredoxin [Pseudomonas sp. Q86-87] Length = 99 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 2/89 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDG 95 +++N+E A WPNIT KK++LP A + DG Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDG 89 >gi|15839190|ref|NP_299878.1| ferredoxin [Xylella fastidiosa 9a5c] gi|9107823|gb|AAF85398.1|AE004067_5 ferredoxin [Xylella fastidiosa 9a5c] Length = 107 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P+ + Sbjct: 1 MPFVVTENCINCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEED 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 E + +N+E A WP +T ++E +P AA+ DG K Sbjct: 61 VPTEQKQCIALNAELAKAWPVVTVRREPMPDAAEWDGKPDKL 102 >gi|53803364|ref|YP_114883.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] gi|53757125|gb|AAU91416.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] Length = 107 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF+EG NFL I PDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAHAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++++N+E + WP+I+ KE+LP A + +G K + Sbjct: 61 LPEGQEQFIQLNAELSKIWPSISEVKEALPDADEWNGKPDKLQ 103 >gi|119476595|ref|ZP_01616905.1| 7-Fe ferredoxin [marine gamma proteobacterium HTCC2143] gi|119449851|gb|EAW31087.1| 7-Fe ferredoxin [marine gamma proteobacterium HTCC2143] Length = 107 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 2/86 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEQCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKK 84 ++++++N+E A WPNIT K Sbjct: 61 LPEDQQVFMELNTELAEVWPNITEIK 86 >gi|198283633|ref|YP_002219954.1| hypothetical protein Lferr_1523 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666844|ref|YP_002426259.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248154|gb|ACH83747.1| Protein of unknown function DUF1971 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519057|gb|ACK79643.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 206 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CILCK+TDCV VCPVDCF+EG NFLAI PDECIDC +C ECPVDAI D + Sbjct: 1 MTHVVTEACILCKYTDCVTVCPVDCFHEGPNFLAIDPDECIDCTLCVSECPVDAIFRDVD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E + ++N+ A +WP I KK +LP A + V+ K Sbjct: 61 LPNGMEEYPELNARLARRWPVIIQKKPALPDAEQWRHVRDK 101 >gi|117573292|gb|ABK40822.1| ferredoxin [Pseudomonas sp. C10-186] gi|117573294|gb|ABK40823.1| ferredoxin [Pseudomonas sp. C10-189] gi|117573296|gb|ABK40824.1| ferredoxin [Pseudomonas sp. C10-190] gi|117573302|gb|ABK40827.1| ferredoxin [Pseudomonas sp. C10-205] Length = 99 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPTGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +++N+E A WPNIT KK++LP A + DG K Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKTGK 93 >gi|171463171|ref|YP_001797284.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192709|gb|ACB43670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 107 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTYVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCVPECPVNAIYAEDD 60 Query: 60 EPG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PG + ++K+N+E + W +IT K +LP A + VK K ++ Sbjct: 61 VPGDQQSFIKLNAELSPSWTSITKSKAALPDAEEWKDVKNKLDQ 104 >gi|229587193|ref|YP_002845694.1| Ferredoxin [Rickettsia africae ESF-5] gi|228022243|gb|ACP53951.1| Ferredoxin [Rickettsia africae ESF-5] Length = 116 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 7/111 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+P ECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPAECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYIG 110 >gi|117573298|gb|ABK40825.1| ferredoxin [Pseudomonas sp. C10-197] gi|117573300|gb|ABK40826.1| ferredoxin [Pseudomonas sp. C10-204] gi|117573322|gb|ABK40837.1| ferredoxin [Pseudomonas sp. S8-110] gi|117573324|gb|ABK40838.1| ferredoxin [Pseudomonas sp. S8-130] Length = 99 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + +N+E A WPNIT KK++LP A + DG + K Sbjct: 61 IVLNAELADIWPNITEKKDALPDAEEWDGKEGK 93 >gi|58698109|ref|ZP_00373032.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila ananassae] gi|225630003|ref|YP_002726794.1| ferredoxin, 4Fe-4S [Wolbachia sp. wRi] gi|58535355|gb|EAL59431.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila ananassae] gi|225591984|gb|ACN95003.1| ferredoxin, 4Fe-4S [Wolbachia sp. wRi] Length = 124 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 66/123 (53%), Positives = 78/123 (63%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 59 TEPGLEL--------------WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + LEL + IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 VKDILELDEELLSSEQKTFKSFYNINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|83647900|ref|YP_436335.1| ferredoxin [Hahella chejuensis KCTC 2396] gi|83635943|gb|ABC31910.1| Ferredoxin [Hahella chejuensis KCTC 2396] Length = 107 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N E WPNIT KK++ A GVK K + Sbjct: 61 LPEDQKEFIALNEELCRVWPNITEKKDAPADADDWKGVKGKLK 103 >gi|169632883|ref|YP_001706619.1| 7-Fe ferredoxin [Acinetobacter baumannii SDF] gi|169796509|ref|YP_001714302.1| 7-Fe ferredoxin [Acinetobacter baumannii AYE] gi|184157558|ref|YP_001845897.1| ferredoxin [Acinetobacter baumannii ACICU] gi|239503728|ref|ZP_04663038.1| ferredoxin [Acinetobacter baumannii AB900] gi|260555572|ref|ZP_05827793.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|301347837|ref|ZP_07228578.1| ferredoxin [Acinetobacter baumannii AB056] gi|301511664|ref|ZP_07236901.1| ferredoxin [Acinetobacter baumannii AB058] gi|301597645|ref|ZP_07242653.1| ferredoxin [Acinetobacter baumannii AB059] gi|332853960|ref|ZP_08435080.1| ferredoxin-1 [Acinetobacter baumannii 6013150] gi|332870215|ref|ZP_08439110.1| ferredoxin-1 [Acinetobacter baumannii 6013113] gi|332874292|ref|ZP_08442211.1| ferredoxin-1 [Acinetobacter baumannii 6014059] gi|169149436|emb|CAM87322.1| 7-Fe ferredoxin [Acinetobacter baumannii AYE] gi|169151675|emb|CAP00465.1| 7-Fe ferredoxin [Acinetobacter baumannii] gi|183209152|gb|ACC56550.1| Ferredoxin [Acinetobacter baumannii ACICU] gi|193076943|gb|ABO11677.2| 7-Fe ferredoxin [Acinetobacter baumannii ATCC 17978] gi|260412114|gb|EEX05411.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|332728316|gb|EGJ59697.1| ferredoxin-1 [Acinetobacter baumannii 6013150] gi|332732382|gb|EGJ63639.1| ferredoxin-1 [Acinetobacter baumannii 6013113] gi|332737517|gb|EGJ68425.1| ferredoxin-1 [Acinetobacter baumannii 6014059] Length = 107 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +WPNIT E + +G K + Sbjct: 61 LPEGQEVFIELNAELSQKWPNITQIGEQPADREEWNGKPDKLQ 103 >gi|160871760|ref|ZP_02061892.1| ferredoxin [Rickettsiella grylli] gi|159120559|gb|EDP45897.1| ferredoxin [Rickettsiella grylli] Length = 111 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT++VTE CI CK+TDCVEVCPVDCFYEG N L IHPDECIDCG+CEPECPV+AI + D Sbjct: 5 MTFLVTEKCIRCKYTDCVEVCPVDCFYEGPNMLVIHPDECIDCGLCEPECPVNAIYVEDD 64 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + +L +N E + +WPNI +K+ P A Sbjct: 65 LPDKYKEFLALNKELSKKWPNIVRRKDPPPDA 96 >gi|171059471|ref|YP_001791820.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170776916|gb|ACB35055.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 107 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI P+ + Sbjct: 1 MTHVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAILPEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 P ++ ++ IN+E + +WP+IT +K +LP A + K K Sbjct: 61 VPADQMKFIAINAELSPKWPSITKRKAALPDADEWKDRKDKL 102 >gi|88705822|ref|ZP_01103531.1| Ferredoxin [Congregibacter litoralis KT71] gi|88699893|gb|EAQ97003.1| Ferredoxin [Congregibacter litoralis KT71] Length = 107 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 +++L++N+E A WP IT K + A + G Sbjct: 61 LPADQQVFLELNAELAEVWPCITEMKPAPEDAEEWAG 97 >gi|117573312|gb|ABK40832.1| ferredoxin [Pseudomonas sp. P97.39] gi|117573330|gb|ABK40841.1| ferredoxin [Pseudomonas sp. F96.26] gi|117573336|gb|ABK40844.1| ferredoxin [Pseudomonas sp. P97.1] gi|117573338|gb|ABK40845.1| ferredoxin [Pseudomonas sp. P97.27] Length = 99 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 2/89 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGQENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDG 95 +++N+E A WPNIT KK++LP A + DG Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDG 89 >gi|28199843|ref|NP_780157.1| ferredoxin [Xylella fastidiosa Temecula1] gi|71275225|ref|ZP_00651512.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Dixon] gi|71899554|ref|ZP_00681710.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|71899939|ref|ZP_00682086.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|170731220|ref|YP_001776653.1| ferredoxin [Xylella fastidiosa M12] gi|182682594|ref|YP_001830754.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xylella fastidiosa M23] gi|28057964|gb|AAO29806.1| ferredoxin [Xylella fastidiosa Temecula1] gi|71164034|gb|EAO13749.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Dixon] gi|71730302|gb|EAO32386.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|71730683|gb|EAO32758.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|167966013|gb|ACA13023.1| ferredoxin [Xylella fastidiosa M12] gi|182632704|gb|ACB93480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xylella fastidiosa M23] gi|307578876|gb|ADN62845.1| ferredoxin [Xylella fastidiosa subsp. fastidiosa GB514] Length = 107 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P+ + Sbjct: 1 MPFVVTENCINCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEED 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 E + +N+E A WP +T ++E +P AA+ +G K Sbjct: 61 VPTEQKQCIALNAELAKAWPVVTVRREPMPDAAEWNGKPDKL 102 >gi|120611719|ref|YP_971397.1| 4Fe-4S ferredoxin [Acidovorax citrulli AAC00-1] gi|120590183|gb|ABM33623.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax citrulli AAC00-1] Length = 107 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 + ++K+N+E A QW +IT +K SLP A + +G Sbjct: 61 LPADQQAFIKLNAELAPQWKSITKRKASLPDADEWNG 97 >gi|326317032|ref|YP_004234704.1| ferredoxin, C-terminal protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373868|gb|ADX46137.1| Ferredoxin, C-terminal protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 107 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 + ++K+N+E A QW +IT +K SLP A + +G Sbjct: 61 LPADQQAFIKLNAELAPQWKSITKRKASLPDADEWNG 97 >gi|145588570|ref|YP_001155167.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046976|gb|ABP33603.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 107 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTYVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCVPECPVNAIYAEDD 60 Query: 60 EPG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PG + ++K+N+E + W +IT K +LP A + VK K ++ Sbjct: 61 VPGDQQSFIKLNAELSPDWTSITKSKPALPDADEWKDVKNKLDQ 104 >gi|153005139|ref|YP_001379464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028712|gb|ABS26480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 108 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDCG CEP CP AI P+ Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCGACEPACPTKAIFPEES 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N++ WPNI+ KK+ LP A + V++K + Sbjct: 61 LPAKWKEYTQLNADLCKTWPNISEKKDPLPDADQWKDVEEKRQ 103 >gi|192359344|ref|YP_001982818.1| 7-Fe ferredoxin [Cellvibrio japonicus Ueda107] gi|190685509|gb|ACE83187.1| 7-Fe ferredoxin [Cellvibrio japonicus Ueda107] Length = 107 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/105 (59%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECPV AI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPVSAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++L++N+E + WPNIT K++ AA DGV K + Sbjct: 61 LPEDQAVFLELNAELSQVWPNITEIKDAPADAADWDGVPGKLQHL 105 >gi|91783228|ref|YP_558434.1| putative 4Fe-4S ferredoxin [Burkholderia xenovorans LB400] gi|91687182|gb|ABE30382.1| Putative 4Fe-4S ferredoxin [Burkholderia xenovorans LB400] Length = 107 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCIQCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++K+N+E A +WP IT K L A + VK K+ Sbjct: 61 VPRDQRHFIKLNAELARRWPGITKTKAPLAEADRFKDVKDKF 102 >gi|117573306|gb|ABK40829.1| ferredoxin [Pseudomonas sp. C6-23] gi|117573308|gb|ABK40830.1| ferredoxin [Pseudomonas sp. C6-2] Length = 99 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/93 (63%), Positives = 69/93 (74%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--W 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E E+ + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPEEMQEF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +++N E A WPNIT KK+ LP A + DGVK K Sbjct: 61 IQLNVELAEIWPNITEKKDPLPDAEEWDGVKGK 93 >gi|187924909|ref|YP_001896551.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] gi|187716103|gb|ACD17327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] Length = 107 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++++N+E A WP+IT K LP A + VK+K E Sbjct: 61 VPGDQQNFIELNAELAKNWPSITKTKAPLPEADEFKDVKEKLE 103 >gi|300112903|ref|YP_003759478.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Nitrosococcus watsonii C-113] gi|299538840|gb|ADJ27157.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus watsonii C-113] Length = 112 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/99 (59%), Positives = 71/99 (71%), Gaps = 2/99 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + D Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + +L+IN+E A WP IT KE A + D +K Sbjct: 61 VPKEHQKYLEINAELARSWPVITESKEPPADADQWDRIK 99 >gi|260549538|ref|ZP_05823756.1| ferredoxin [Acinetobacter sp. RUH2624] gi|293608589|ref|ZP_06690892.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|260407331|gb|EEX00806.1| ferredoxin [Acinetobacter sp. RUH2624] gi|292829162|gb|EFF87524.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 107 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNAELSQKWPNITQIGDQPADREEWNGKPDKLQ 103 >gi|255319931|ref|ZP_05361131.1| ferredoxin-1 [Acinetobacter radioresistens SK82] gi|262379624|ref|ZP_06072780.1| ferredoxin [Acinetobacter radioresistens SH164] gi|255302951|gb|EET82168.1| ferredoxin-1 [Acinetobacter radioresistens SK82] gi|262299081|gb|EEY86994.1| ferredoxin [Acinetobacter radioresistens SH164] Length = 107 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT E + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGEQPADREEWNGKPDKLQ 103 >gi|262369723|ref|ZP_06063051.1| 7-Fe ferredoxin [Acinetobacter johnsonii SH046] gi|262315791|gb|EEY96830.1| 7-Fe ferredoxin [Acinetobacter johnsonii SH046] Length = 107 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNAELSQTWPNITQIGDQPADREEWNGKADKLQ 103 >gi|117573332|gb|ABK40842.1| ferredoxin [Pseudomonas sp. K93.52] Length = 99 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 2/93 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +++N+E A WPNIT KK+ +P A + DG K Sbjct: 61 IELNAELADVWPNITEKKDPMPGAEEWDGKTGK 93 >gi|225677141|ref|ZP_03788140.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590808|gb|EEH12036.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 124 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/123 (52%), Positives = 77/123 (62%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDC EVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCAEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 59 TEPGLEL--------------WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + LEL + IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 IKDILELDEELLNSEQKIFKSFYNINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|73666649|ref|YP_302665.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ehrlichia canis str. Jake] gi|72393790|gb|AAZ68067.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Ehrlichia canis str. Jake] Length = 125 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/123 (47%), Positives = 75/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI PD Sbjct: 1 MTHFVTDKCIRCKYTDCVEVCPVDCFYEGANMLVIDPDQCIDCGVCIPECPIDAIVPDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +IN +++ +W NIT+ K + P A K K+ KYF Sbjct: 61 IKDILECSDSELNEEQKNIKKSYEINKKFSKEWKNITSAKTAYPEAESYKYRKDKF-KYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|292492665|ref|YP_003528104.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291581260|gb|ADE15717.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 112 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + D Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 +LK+N+E A WP IT KE A + D +K Sbjct: 61 LPEEHRNYLKLNAELARNWPVITESKEPPSDADQWDRIKN 100 >gi|262376219|ref|ZP_06069449.1| 7-Fe ferredoxin [Acinetobacter lwoffii SH145] gi|262308820|gb|EEY89953.1| 7-Fe ferredoxin [Acinetobacter lwoffii SH145] Length = 107 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGDQPADREEWNGKADKLQ 103 >gi|297538391|ref|YP_003674160.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera sp. 301] gi|297257738|gb|ADI29583.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera sp. 301] Length = 107 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI + D Sbjct: 1 MTYVVTENCIQCKFTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+ A WP IT++K +L A M+GV K + Sbjct: 61 VPADQQEFIALNARLAELWPVITSRKAALEDAEAMNGVPGKRD 103 >gi|289208208|ref|YP_003460274.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288943839|gb|ADC71538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 107 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP-DT 59 M ++V ENCI CK+TDCVEVCPVDCF+EG NFLAI PDECIDC +CEPECP +AI P D Sbjct: 1 MAFIVLENCIKCKYTDCVEVCPVDCFHEGPNFLAIDPDECIDCTLCEPECPAEAIVPEDD 60 Query: 60 EPGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 P +L ++++N+E + WP IT +K+ A + DGV+ K Sbjct: 61 VPEDQLQFIELNAELSRTWPVITARKDPPEDAEEWDGVEGKL 102 >gi|312795504|ref|YP_004028426.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] gi|312167279|emb|CBW74282.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 131 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 25 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 84 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++++N+E A WP+IT K LP A + VK K + Sbjct: 85 VPGDQQQFIQLNAELAKDWPSITRTKPPLPDAVEWKDVKDKLK 127 >gi|296135523|ref|YP_003642765.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295795645|gb|ADG30435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 107 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 70/88 (79%), Gaps = 2/88 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI + + Sbjct: 1 MTFVVTENCIRCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKES 86 PG + ++K+N+E + QWP+IT +K + Sbjct: 61 VPGDQQAFIKLNAELSRQWPSITKRKAA 88 >gi|294339652|emb|CAZ88012.1| Ferredoxin [Thiomonas sp. 3As] Length = 107 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 70/88 (79%), Gaps = 2/88 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI + + Sbjct: 1 MTFVVTENCIRCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKES 86 PG + ++K+N+E + QWP+IT +K + Sbjct: 61 VPGDQQAFIKLNAELSRQWPSITKRKAA 88 >gi|124266690|ref|YP_001020694.1| ferredoxin [Methylibium petroleiphilum PM1] gi|124259465|gb|ABM94459.1| ferredoxin [Methylibium petroleiphilum PM1] Length = 107 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/92 (61%), Positives = 71/92 (77%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI P+ + Sbjct: 1 MTHVVTEACIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAILPEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSA 90 PG + ++ IN E + +WP+IT +K +LP A Sbjct: 61 VPGDQQQFIAINVELSKKWPSITKRKTALPDA 92 >gi|50084667|ref|YP_046177.1| 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|262278522|ref|ZP_06056307.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus RUH2202] gi|299770827|ref|YP_003732853.1| ferredoxin [Acinetobacter sp. DR1] gi|15217085|gb|AAK92496.1|AF400582_5 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|49530643|emb|CAG68355.1| 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|262258873|gb|EEY77606.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus RUH2202] gi|298700915|gb|ADI91480.1| ferredoxin [Acinetobacter sp. DR1] Length = 107 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGDQPADREEWNGKPDKLQ 103 >gi|77163722|ref|YP_342247.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosococcus oceani ATCC 19707] gi|76882036|gb|ABA56717.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosococcus oceani ATCC 19707] Length = 112 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + D Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 + +L IN+E A WP IT KE A + D +K Sbjct: 61 VPKEHQKYLGINAELAKSWPVITESKEPPADADQWDRIKN 100 >gi|153872043|ref|ZP_02001049.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beggiatoa sp. PS] gi|152071489|gb|EDN68949.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beggiatoa sp. PS] Length = 109 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTENCILCK+TDC+EVCPVDCF+EG NFL I P+ECIDC +CEPECP AI + D Sbjct: 1 MAFVVTENCILCKYTDCIEVCPVDCFHEGPNFLVIDPEECIDCTLCEPECPAKAIYSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +++IN++ + +WP IT +K+ P A + DG K + Sbjct: 61 LPSEQQHFVQINADLSQKWPVITERKDPPPDAEQWDGKPDKLQ 103 >gi|34497002|ref|NP_901217.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34102859|gb|AAQ59223.1| ferredoxin [Chromobacterium violaceum ATCC 12472] Length = 112 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 8/106 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---- 56 MTYVV +CI CKH+DCV+VCP D F+EG N LAI+PD+CIDCG+C PECP+DAI+ Sbjct: 1 MTYVVLSDCIGCKHSDCVDVCPTDSFHEGPNMLAINPDDCIDCGLCVPECPIDAIREDKA 60 Query: 57 -PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P E G+ + +N+E A +WPNIT K +LP A G K + Sbjct: 61 VPSHEHGM---IALNAELAQRWPNITKSKPALPEAEAWRGRPDKLQ 103 >gi|56417282|ref|YP_154356.1| ferredoxin II [Anaplasma marginale str. St. Maries] gi|222475646|ref|YP_002564063.1| ferredoxin II (fdxA) [Anaplasma marginale str. Florida] gi|254995448|ref|ZP_05277638.1| ferredoxin II (fdxA) [Anaplasma marginale str. Mississippi] gi|255003639|ref|ZP_05278603.1| ferredoxin II (fdxA) [Anaplasma marginale str. Puerto Rico] gi|255004765|ref|ZP_05279566.1| ferredoxin II (fdxA) [Anaplasma marginale str. Virginia] gi|56388514|gb|AAV87101.1| ferredoxin II [Anaplasma marginale str. St. Maries] gi|222419784|gb|ACM49807.1| ferredoxin II (fdxA) [Anaplasma marginale str. Florida] Length = 123 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDCVEVCPVDCFYEGEN L I PD+CIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGENMLVIDPDQCIDCGVCVPECPVDAIVSDEF 60 Query: 59 --------------TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + KIN+E++ +W NIT K + A + K +YF Sbjct: 61 IEDIISCDDSALNERQQSLKAFHKINAEFSKKWKNITASKPPMEEAERYKDDLNK-AQYF 119 Query: 105 SPN 107 N Sbjct: 120 KEN 122 >gi|198282163|ref|YP_002218484.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666462|ref|YP_002424528.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246684|gb|ACH82277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518675|gb|ACK79261.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 108 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDC EVCPV+CF+EG NFL I P ECIDC C PECP DAI D E Sbjct: 1 MTYVVTENCIQCKYTDCAEVCPVECFHEGPNFLVIDPVECIDCAACVPECPADAIFADDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 P + IN+E A WP I KK +LP A +G K Sbjct: 61 VPPDQRDFTAINAELARDWPVILRKKAALPDAETWNGKGDK 101 >gi|269958328|ref|YP_003328115.1| ferredoxin [Anaplasma centrale str. Israel] gi|269848157|gb|ACZ48801.1| ferredoxin [Anaplasma centrale str. Israel] Length = 123 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+ VT+ CI CK+TDCVEVCPVDCFYEGEN L I PD+CIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGENMLVIDPDQCIDCGVCVPECPVDAIVSDEF 60 Query: 59 --------------TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + KIN+E++ +W NIT K + A + K +YF Sbjct: 61 IEDIISCDDSTLNERQQSLKAFHKINAEFSKKWKNITASKPPMEEAERYKDDLNK-AQYF 119 Query: 105 SPN 107 N Sbjct: 120 KEN 122 >gi|34498889|ref|NP_903104.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34104740|gb|AAQ61097.1| ferredoxin [Chromobacterium violaceum ATCC 12472] Length = 107 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVT+ CI CK+TDCVEVCPVDCF EG NFLAI PDECIDC +C PECPV AI + D Sbjct: 1 MAYVVTDACIKCKYTDCVEVCPVDCFREGPNFLAIDPDECIDCSLCVPECPVGAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G E ++ +N+E A WP+I + + LP A VK K Sbjct: 61 VPKGQEAFIALNAELAKNWPSIVERIDPLPDHADWADVKDK 101 >gi|91784742|ref|YP_559948.1| putative ferredoxin [Burkholderia xenovorans LB400] gi|296158268|ref|ZP_06841100.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] gi|91688696|gb|ABE31896.1| Putative ferredoxin [Burkholderia xenovorans LB400] gi|295891604|gb|EFG71390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] Length = 107 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++++N++ A WP+IT K LP A + VK K E Sbjct: 61 VPGDQQNFIELNADLAKSWPSITKTKAPLPEADEFKDVKDKLE 103 >gi|88810236|ref|ZP_01125493.1| ferredoxin, 4Fe-4S [Nitrococcus mobilis Nb-231] gi|88791866|gb|EAR22976.1| ferredoxin, 4Fe-4S [Nitrococcus mobilis Nb-231] Length = 107 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFLAI P+ECIDC +CEPECP +AI + D Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLAIDPEECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +L++N+E A +WP IT K++ A + DG K + Sbjct: 61 LPEEQHHFLELNAELAQKWPVITEMKDAPKDAEEWDGKPGKLQ 103 >gi|53719819|ref|YP_108805.1| ferredoxin I [Burkholderia pseudomallei K96243] gi|53724135|ref|YP_103250.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76809614|ref|YP_334029.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121598984|ref|YP_993430.1| ferredoxin [Burkholderia mallei SAVP1] gi|124386308|ref|YP_001029137.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|134277295|ref|ZP_01764010.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|167824830|ref|ZP_02456301.1| ferredoxin [Burkholderia pseudomallei 9] gi|226198916|ref|ZP_03794479.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|238562467|ref|ZP_00440400.2| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|251766955|ref|ZP_02265481.2| ferredoxin [Burkholderia mallei PRL-20] gi|254178196|ref|ZP_04884851.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|254191489|ref|ZP_04897993.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|254198288|ref|ZP_04904710.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|254200199|ref|ZP_04906565.1| ferredoxin [Burkholderia mallei FMH] gi|254209279|ref|ZP_04915625.1| ferredoxin [Burkholderia mallei JHU] gi|254259347|ref|ZP_04950401.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|254297156|ref|ZP_04964609.1| putative ferredoxin [Burkholderia pseudomallei 406e] gi|254358050|ref|ZP_04974323.1| ferredoxin [Burkholderia mallei 2002721280] gi|262193288|ref|YP_001080939.2| ferredoxin [Burkholderia mallei NCTC 10247] gi|52210233|emb|CAH36212.1| ferredoxin I [Burkholderia pseudomallei K96243] gi|52427558|gb|AAU48151.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76579067|gb|ABA48542.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121227794|gb|ABM50312.1| ferredoxin [Burkholderia mallei SAVP1] gi|124294328|gb|ABN03597.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|134250945|gb|EBA51024.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|147749795|gb|EDK56869.1| ferredoxin [Burkholderia mallei FMH] gi|147750052|gb|EDK57123.1| ferredoxin [Burkholderia mallei JHU] gi|148027177|gb|EDK85198.1| ferredoxin [Burkholderia mallei 2002721280] gi|157807005|gb|EDO84175.1| putative ferredoxin [Burkholderia pseudomallei 406e] gi|157939161|gb|EDO94831.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|160699235|gb|EDP89205.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|169655029|gb|EDS87722.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|225929016|gb|EEH25040.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|238522582|gb|EEP86025.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|243064296|gb|EES46482.1| ferredoxin [Burkholderia mallei PRL-20] gi|254218036|gb|EET07420.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|261835063|gb|ABO05671.2| ferredoxin [Burkholderia mallei NCTC 10247] Length = 112 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|88813310|ref|ZP_01128549.1| ferrodoxin [Nitrococcus mobilis Nb-231] gi|88789482|gb|EAR20610.1| ferrodoxin [Nitrococcus mobilis Nb-231] Length = 108 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 5/104 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +C PECPV+AI D Sbjct: 1 MTYVVTERCIRCKYTDCVEVCPVDCFHEGRNFLVIDPDECIDCALCVPECPVEAIYADDR 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 G E + ++N++ A WP IT +K P+ A + ++ +K Sbjct: 61 LPEGQERFFELNAQLARAWPVITRRK---PAPADAEEWREATDK 101 >gi|332527731|ref|ZP_08403772.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332112129|gb|EGJ12105.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 107 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ++CI CK+TDCV+VCPVDCF EG NFL I P+ECIDC VC PECP +AI P+ + Sbjct: 1 MTHVVLDSCIRCKYTDCVDVCPVDCFREGPNFLVIDPEECIDCAVCIPECPANAILPEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P +L ++++N+E A WP+IT +K SLP A + K K + Sbjct: 61 VPADQLQFIQLNAELAKTWPSITKRKASLPDADEWKDRKNKLQ 103 >gi|57238754|ref|YP_179890.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58578675|ref|YP_196887.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58616738|ref|YP_195937.1| ferredoxin [Ehrlichia ruminantium str. Gardel] gi|57160833|emb|CAH57731.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58416350|emb|CAI27463.1| Ferredoxin [Ehrlichia ruminantium str. Gardel] gi|58417301|emb|CAI26505.1| Ferredoxin [Ehrlichia ruminantium str. Welgevonden] Length = 125 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ +T+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI D Sbjct: 1 MTHFITDRCIKCKYTDCVEVCPVDCFYEGPNMLVIDPDQCIDCGVCIPECPIDAIIADDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + +IN E++ +W NIT++K LP A K K+ YF Sbjct: 61 IKDILESDNNVLNDEQKSFKKFYEINREFSKKWENITSRKSPLPEAESYKYKKDKF-IYF 119 Query: 105 SPN 107 + N Sbjct: 120 NEN 122 >gi|118594760|ref|ZP_01552107.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Methylophilales bacterium HTCC2181] gi|118440538|gb|EAV47165.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Methylophilales bacterium HTCC2181] Length = 108 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFLAI P+ECIDC +C ECPV+AI + D Sbjct: 1 MTYVVTESCIQCKYTDCVDVCPVDCFVEGPNFLAIDPEECIDCTLCVAECPVEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +++IN++ A WP IT KK++LP A G K E Sbjct: 61 VPEDQQEFIEINAKLAKVWPIITAKKDALPDADAFAGQANKKE 103 >gi|126441756|ref|YP_001059528.1| putative ferredoxin [Burkholderia pseudomallei 668] gi|217425596|ref|ZP_03457088.1| putative ferredoxin [Burkholderia pseudomallei 576] gi|254184452|ref|ZP_04891042.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|126221249|gb|ABN84755.1| putative ferredoxin [Burkholderia pseudomallei 668] gi|184214983|gb|EDU12026.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|217391373|gb|EEC31403.1| putative ferredoxin [Burkholderia pseudomallei 576] Length = 112 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRPFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|294341325|emb|CAZ89740.1| ferredoxin [Thiomonas sp. 3As] Length = 107 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI + D Sbjct: 1 MTFVVTENCIKCKFTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E + +WP+IT +K + P + +G K + Sbjct: 61 VPGDQQAFIALNAELSRRWPSITKRKPAPPDGEEWNGKPGKLQ 103 >gi|307730560|ref|YP_003907784.1| putative ferredoxin [Burkholderia sp. CCGE1003] gi|307585095|gb|ADN58493.1| putative ferredoxin [Burkholderia sp. CCGE1003] Length = 107 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + ++++N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQNFIELNADLAKSWPSITKTKAPLPEADEFKDVKEKL 102 >gi|170696356|ref|ZP_02887486.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|323526893|ref|YP_004229046.1| putative ferredoxin [Burkholderia sp. CCGE1001] gi|170138762|gb|EDT06960.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|323383895|gb|ADX55986.1| putative ferredoxin [Burkholderia sp. CCGE1001] Length = 107 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + ++++N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQNFIELNADLAKNWPSITKTKAPLPEADEFKDVKEKL 102 >gi|17545833|ref|NP_519235.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17428127|emb|CAD14816.1| probable ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 108 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCIRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + W+ IN+E A WP+IT K LP A + VK K E+Y Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKSPLPDAEEWKDVKDK-EQYL 106 >gi|89902899|ref|YP_525370.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89347636|gb|ABD71839.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 107 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCV+VCPVD F EG NFLAI PDECIDC VC PECPV+AI + D Sbjct: 1 MTFVVTESCISCKYTDCVDVCPVDAFREGPNFLAIDPDECIDCAVCVPECPVNAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+E A +W IT K +LP A K V K Sbjct: 61 VPADQQDFIALNAELAPKWKTITRTKAALPDADKWASVAAK 101 >gi|209521147|ref|ZP_03269874.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. H160] gi|295677210|ref|YP_003605734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] gi|209498422|gb|EDZ98550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. H160] gi|295437053|gb|ADG16223.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] Length = 107 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 74/102 (72%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + ++ +N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQDFIALNADLAKAWPSITKTKAPLPEAEEFKDVKEKL 102 >gi|91776028|ref|YP_545784.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91710015|gb|ABE49943.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 107 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI + D Sbjct: 1 MAYVVTENCIQCKYTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++++N+ A WP+IT +K LP A +GV K Sbjct: 61 VPEDQQEFIELNARLAQIWPSITARKAPLPDADANNGVPGK 101 >gi|300691906|ref|YP_003752901.1| ferredoxin (fdxA) [Ralstonia solanacearum PSI07] gi|299078966|emb|CBJ51626.1| Ferredoxin (fdxA) [Ralstonia solanacearum PSI07] Length = 108 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYA-TQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + W+ IN+E A + WP+IT K LP A + VK K E+Y Sbjct: 61 VPADQQKWIAINAELAQSGWPSITKTKSPLPDAEEWKDVKDK-EQYL 106 >gi|186475572|ref|YP_001857042.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phymatum STM815] gi|184192031|gb|ACC69996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phymatum STM815] Length = 107 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K LP A VK+K Sbjct: 61 VPGDQQHFTALNAELAKAWPSITKTKSPLPEADDFKDVKEKL 102 >gi|300704516|ref|YP_003746119.1| ferredoxin (fdxa) [Ralstonia solanacearum CFBP2957] gi|299072180|emb|CBJ43512.1| Ferredoxin (fdxA) [Ralstonia solanacearum CFBP2957] Length = 108 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + W+ IN+E A WP+IT K LP A + VK K E+Y Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKSPLPEADQWKDVKDK-EQYL 106 >gi|241662657|ref|YP_002981017.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|309781213|ref|ZP_07675950.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] gi|240864684|gb|ACS62345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] gi|308920034|gb|EFP65694.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] Length = 109 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 + W+ IN+E A WP+IT K+ LP A VK K E+Y Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKQPLPDADDWKDVKDK-EQYLD 107 >gi|224588329|gb|ACN58953.1| ferredoxin [uncultured bacterium BLR10] Length = 107 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF +G NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCISCRYTDCVDVCPVDCFRQGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++KIN + A WP+IT LP A + VK+K Sbjct: 61 VPGDQQQFIKINVDLARNWPSITKTVSPLPEADQFKDVKEKLH 103 >gi|221134033|ref|ZP_03560338.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola sp. HTCC2999] Length = 108 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +C PECP DAI D Sbjct: 1 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCELCVPECPADAIVQDEK 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 P +L++N+E A QWPNI K + A K +GV K Sbjct: 61 ISPDQAQFLELNAELAKQWPNINEMKPAPADADKWNGVANK 101 >gi|49080100|gb|AAT49971.1| PA2715 [synthetic construct] Length = 113 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 4/88 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDE 60 Query: 61 P--GLELWLKINSEYATQ--WPNITTKK 84 G ++ +N E A W IT KK Sbjct: 61 VPLGQRQFIALNGELAAHPNWTQITRKK 88 >gi|15597911|ref|NP_251405.1| ferredoxin [Pseudomonas aeruginosa PAO1] gi|107102238|ref|ZP_01366156.1| hypothetical protein PaerPA_01003290 [Pseudomonas aeruginosa PACS2] gi|116050700|ref|YP_790480.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|218891124|ref|YP_002439990.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|254235694|ref|ZP_04929017.1| hypothetical protein PACG_01630 [Pseudomonas aeruginosa C3719] gi|254241140|ref|ZP_04934462.1| hypothetical protein PA2G_01829 [Pseudomonas aeruginosa 2192] gi|296388818|ref|ZP_06878293.1| putative ferredoxin [Pseudomonas aeruginosa PAb1] gi|313107772|ref|ZP_07793951.1| putative ferredoxin [Pseudomonas aeruginosa 39016] gi|9948790|gb|AAG06103.1|AE004699_8 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|115585921|gb|ABJ11936.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|126167625|gb|EAZ53136.1| hypothetical protein PACG_01630 [Pseudomonas aeruginosa C3719] gi|126194518|gb|EAZ58581.1| hypothetical protein PA2G_01829 [Pseudomonas aeruginosa 2192] gi|218771349|emb|CAW27116.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] gi|310880453|gb|EFQ39047.1| putative ferredoxin [Pseudomonas aeruginosa 39016] Length = 112 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 4/88 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDE 60 Query: 61 P--GLELWLKINSEYATQ--WPNITTKK 84 G ++ +N E A W IT KK Sbjct: 61 VPLGQRQFIALNGELAAHPNWTQITRKK 88 >gi|167627085|ref|YP_001677585.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667647|ref|ZP_04755225.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876192|ref|ZP_05248902.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597086|gb|ABZ87084.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842213|gb|EET20627.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 107 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/106 (57%), Positives = 68/106 (64%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPVDAIK D Sbjct: 1 MPFVVTENCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVDAIKSSDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 E L +N E A+ WPNI K + A V K KY Sbjct: 61 LTESQEQMLDLNRELASIWPNIVEKCDPCEDADNWASVPDKL-KYL 105 >gi|149926235|ref|ZP_01914497.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149825053|gb|EDM84265.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 107 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI + D Sbjct: 1 MTHVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E A WP+IT K LP A VK K + Sbjct: 61 VPADQVKFIDMNVELAKDWPSITRMKAHLPDADDWKDVKDKLQ 103 >gi|187928049|ref|YP_001898536.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|187724939|gb|ACD26104.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] Length = 109 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 + W+ IN E A WP+IT K+ LP A VK K E+Y Sbjct: 61 VPADQQKWIAINVELAQAGWPSITKTKQPLPDADDWKDVKDK-EQYLD 107 >gi|46205236|ref|ZP_00209759.1| COG1146: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 92 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 52/64 (81%), Positives = 56/64 (87%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE LE W Sbjct: 1 DNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTEGNLESW 60 Query: 67 LKIN 70 LK+N Sbjct: 61 LKLN 64 >gi|157376399|ref|YP_001474999.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318773|gb|ABV37871.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 107 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVT+NCI CK+TDCV VCPVD F+EG NFLAI+P+ CIDC +C PEC AI + D Sbjct: 1 MAFVVTDNCIRCKYTDCVAVCPVDAFHEGPNFLAINPEVCIDCDLCVPECAAQAIFQEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 G+E +L++N+E A WP IT KE+ A + DGVK K E Sbjct: 61 LPEGMEQYLELNAELAQIWPVITEVKEAPADAEEWDGVKNKREHLI 106 >gi|88606918|ref|YP_504664.1| ferredoxin [Anaplasma phagocytophilum HZ] gi|88597981|gb|ABD43451.1| ferredoxin [Anaplasma phagocytophilum HZ] Length = 126 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--- 57 MT+ VT+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP DAI Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEF 60 Query: 58 -------------DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 D + L+ + KIN +++ +W NIT+ + L A + KY+ +F Sbjct: 61 IEDVLASDDSALNDEQKMLKTFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQ-FF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|32470342|ref|NP_863589.1| ferredoxin [Acidithiobacillus ferrooxidans] gi|1657802|gb|AAC80173.1| ferredoxin [Acidithiobacillus ferrooxidans] Length = 122 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV VCPVDCF+EG NFLAI PDECIDC +C PECPVDAI D + Sbjct: 1 MTHVVTEACIRCKYTDCVTVCPVDCFHEGPNFLAIDPDECIDCTLCVPECPVDAIFRDVD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 +E + ++N+ A +WP I KK +LP A + Sbjct: 61 LPDAVEKYPELNARLARRWPVIIQKKPALPDAEQ 94 >gi|237747779|ref|ZP_04578259.1| ferredoxin [Oxalobacter formigenes OXCC13] gi|229379141|gb|EEO29232.1| ferredoxin [Oxalobacter formigenes OXCC13] Length = 107 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT+ CILCK+TDCV+VCPVDCF+EG N L I+P+ECIDC VC PECP +AI + D Sbjct: 1 MTHVVTDACILCKYTDCVDVCPVDCFHEGPNTLVINPNECIDCAVCVPECPAEAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N+E + +WP IT K+ +P A K VK K Sbjct: 61 VPENQQEFIALNAELSGKWPTITRSKDPMPDADKWKDVKDKLRHLI 106 >gi|255021900|ref|ZP_05293910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus caldus ATCC 51756] gi|254968724|gb|EET26276.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus caldus ATCC 51756] Length = 206 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCV VCPVDCF+EG NFL I P ECIDC +C ECPVDAI D + Sbjct: 1 MTHVVTESCIQCKYTDCVTVCPVDCFHEGPNFLVIDPCECIDCTLCVAECPVDAIFRDVD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +L++N++ A WP I KK +LP A + V K E Sbjct: 61 MPDGSEGYLELNAQLAQIWPVIIQKKAALPEAERWRHVMPKRE 103 >gi|237745589|ref|ZP_04576069.1| ferredoxin-1 [Oxalobacter formigenes HOxBLS] gi|229376940|gb|EEO27031.1| ferredoxin-1 [Oxalobacter formigenes HOxBLS] Length = 107 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT+ C+LCK+TDCV+VCPVDCF+EG N L I+P+ECIDC VC PECP +AI + D Sbjct: 1 MTHVVTDACVLCKYTDCVDVCPVDCFHEGPNTLVINPNECIDCAVCVPECPSEAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+E + +WP IT K+ LP A K VK K Sbjct: 61 VPADQQEYIALNAELSRKWPTITRSKDPLPDADKWKDVKNK 101 >gi|257094884|ref|YP_003168525.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047408|gb|ACV36596.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 107 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 72/109 (66%), Gaps = 9/109 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----- 55 M YVVTE+CI CK TDCV+VCPVDCF+EG NFL I PDECIDC +C PECP +AI Sbjct: 1 MAYVVTESCIKCKFTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCVPECPAEAIFAEDD 60 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PDT+ ++ +N+E A WP I +K+ LP A + +G K KY Sbjct: 61 VPDTQRA---FIALNAELAKAWPTIVERKDPLPDADEWNGRADKL-KYL 105 >gi|68171341|ref|ZP_00544738.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ehrlichia chaffeensis str. Sapulpa] gi|88658543|ref|YP_506870.1| ferredoxin A [Ehrlichia chaffeensis str. Arkansas] gi|67999239|gb|EAM85892.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ehrlichia chaffeensis str. Sapulpa] gi|88600000|gb|ABD45469.1| ferredoxin A [Ehrlichia chaffeensis str. Arkansas] Length = 125 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ +T+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI PD Sbjct: 1 MTHFITDRCIRCKYTDCVEVCPVDCFYEGANMLVIDPDQCIDCGVCVPECPIDAIVPDDF 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + +IN +++ +W NIT+ K A K K+ YF Sbjct: 61 IRDVLECNDSALNEEQKNLKKFYEINKKFSKEWNNITSAKPPYSDAESHKYTKNKF-IYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|329910055|ref|ZP_08275214.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] gi|327546280|gb|EGF31309.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] Length = 107 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCIQCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + ++K+N + + WP+IT K +LP A + ++ K Sbjct: 61 VPADQQQFIKLNIDLSRGWPSITKTKAALPEADEFKDMQAKL 102 >gi|253999231|ref|YP_003051294.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylovorus sp. SIP3-4] gi|313201319|ref|YP_004039977.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylovorus sp. MP688] gi|253985910|gb|ACT50767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylovorus sp. SIP3-4] gi|312440635|gb|ADQ84741.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylovorus sp. MP688] Length = 107 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI + D Sbjct: 1 MAYVVTENCIQCKYTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+ + WP IT +K+ LP A +G K + Sbjct: 61 VPADQQEFIALNARLSAIWPTITGRKDPLPDADSNNGKAGKRD 103 >gi|121594158|ref|YP_986054.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222111124|ref|YP_002553388.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120606238|gb|ABM41978.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221730568|gb|ACM33388.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 107 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P +L ++KIN+E ++ +IT +K +LP A +G K ++ Sbjct: 61 LPSDQLAFIKINAELTPKFKSITKRKAALPDADDWNGKPGKLDQL 105 >gi|152987732|ref|YP_001349347.1| putative ferredoxin [Pseudomonas aeruginosa PA7] gi|150962890|gb|ABR84915.1| probable ferredoxin [Pseudomonas aeruginosa PA7] Length = 112 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 63/88 (71%), Gaps = 4/88 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHP+ECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPEECIDCALCEPECPVAAIRAEDE 60 Query: 61 P--GLELWLKINSEYATQ--WPNITTKK 84 G ++ +N E A W IT KK Sbjct: 61 VPLGQRQFIGLNGELAAHPNWTRITRKK 88 >gi|126454614|ref|YP_001066809.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|167911570|ref|ZP_02498661.1| putative ferredoxin [Burkholderia pseudomallei 112] gi|167919580|ref|ZP_02506671.1| putative ferredoxin [Burkholderia pseudomallei BCC215] gi|242317545|ref|ZP_04816561.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|126228256|gb|ABN91796.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|242140784|gb|EES27186.1| putative ferredoxin [Burkholderia pseudomallei 1106b] Length = 112 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|29653919|ref|NP_819611.1| ferredoxin [Coxiella burnetii RSA 493] gi|153208803|ref|ZP_01947030.1| ferrodoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154706253|ref|YP_001424826.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161829743|ref|YP_001596509.1| ferrodoxin [Coxiella burnetii RSA 331] gi|165919089|ref|ZP_02219175.1| ferrodoxin [Coxiella burnetii RSA 334] gi|212212928|ref|YP_002303864.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212218799|ref|YP_002305586.1| ferredoxin [Coxiella burnetii CbuK_Q154] gi|29541182|gb|AAO90125.1| ferredoxin [Coxiella burnetii RSA 493] gi|120575709|gb|EAX32333.1| ferrodoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154355539|gb|ABS77001.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161761610|gb|ABX77252.1| ferrodoxin [Coxiella burnetii RSA 331] gi|165917223|gb|EDR35827.1| ferrodoxin [Coxiella burnetii RSA 334] gi|212011338|gb|ACJ18719.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212013061|gb|ACJ20441.1| ferredoxin [Coxiella burnetii CbuK_Q154] Length = 111 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VV +NCI CK+TDCVEVCPVDCF EG N L I PDECIDC +C PECPVDAI + D Sbjct: 1 MTFVVIDNCIRCKYTDCVEVCPVDCFREGPNMLVIDPDECIDCNLCVPECPVDAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +L++N++ A +WP IT KKE+ P A V K + Sbjct: 61 LPEEKHAFLEMNADLAKRWPLITAKKEAPPDADDWTEVPDKLQ 103 >gi|82701854|ref|YP_411420.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosospira multiformis ATCC 25196] gi|82409919|gb|ABB74028.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosospira multiformis ATCC 25196] Length = 107 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYSEDD 60 Query: 60 EPGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PG + ++ +N+E + W I KK++LP A V +K EK Sbjct: 61 VPGTQQHFIALNAELSKSWKPIIEKKDALPDADDWAKVTEKLEK 104 >gi|222102197|ref|YP_002546787.1| hypothetical protein Arad_12331 [Agrobacterium radiobacter K84] gi|221728314|gb|ACM31323.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 107 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK DCVE CPV+CF+EG NFL I+P ECIDCGVCEP CP +AI P E Sbjct: 1 MTFVVTENCIKCKFQDCVEACPVNCFHEGPNFLVINPSECIDCGVCEPVCPAEAIYPLEE 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +E + +NSE A +WP IT K A+ DG + K Sbjct: 61 LPVEQAAFAALNSELAAEWPVITIKGPPPADASIWDGKRGKL 102 >gi|160900089|ref|YP_001565671.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160365673|gb|ABX37286.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Delftia acidovorans SPH-1] Length = 109 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 P +L ++K+N+E + + W +IT +K SLP A +G K ++ Sbjct: 61 VPADQLAFIKLNAELSLEKGWKSITKRKASLPDADDWNGKPGKLDQL 107 >gi|187477594|ref|YP_785618.1| ferredoxin [Bordetella avium 197N] gi|115422180|emb|CAJ48704.1| ferredoxin [Bordetella avium 197N] Length = 107 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E + ++ +I+ K+ LP A + +GV+ K + Sbjct: 61 VPQDQMKFIALNAELSAEFASISRAKKPLPDADEWNGVQDKLQ 103 >gi|237812865|ref|YP_002897316.1| ferredoxin-1 [Burkholderia pseudomallei MSHR346] gi|237506519|gb|ACQ98837.1| ferredoxin-1 [Burkholderia pseudomallei MSHR346] Length = 112 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRPFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|327481594|gb|AEA84904.1| ferredoxin, 4Fe-4S [Pseudomonas stutzeri DSM 4166] Length = 107 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/92 (58%), Positives = 64/92 (69%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCP DCF+EG NFL I+P+ CIDC +C PECP DAI D Sbjct: 1 MTYVVTENCIRCKYTDCVEVCPADCFHEGPNFLVINPETCIDCSLCAPECPADAIFADNA 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSA 90 G + +L++N+E A WP IT L A Sbjct: 61 LPEGQQHFLELNAELAEVWPVITQSASPLAEA 92 >gi|226951441|ref|ZP_03821905.1| 7-Fe ferredoxin [Acinetobacter sp. ATCC 27244] gi|262373026|ref|ZP_06066305.1| ferredoxin [Acinetobacter junii SH205] gi|294650963|ref|ZP_06728304.1| ferredoxin 1 [Acinetobacter haemolyticus ATCC 19194] gi|226837808|gb|EEH70191.1| 7-Fe ferredoxin [Acinetobacter sp. ATCC 27244] gi|262313051|gb|EEY94136.1| ferredoxin [Acinetobacter junii SH205] gi|292823144|gb|EFF82006.1| ferredoxin 1 [Acinetobacter haemolyticus ATCC 19194] Length = 109 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWP--NITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +W NIT E + +G K + Sbjct: 61 LPEGQEVFIELNAELSEKWAGNNITQIGEQPADREEWNGKPNKLQ 105 >gi|134094047|ref|YP_001099122.1| 7-Fe ferredoxin [Herminiimonas arsenicoxydans] gi|133737950|emb|CAL60995.1| Ferredoxin-1 (Ferredoxin I) (FdI) [Herminiimonas arsenicoxydans] Length = 107 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT++C+LC++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTDSCVLCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + ++K+N E + WP+IT K LP A Sbjct: 61 VPADQQHYIKLNVELSRNWPSITKTKAPLPEA 92 >gi|218507913|ref|ZP_03505791.1| ferredoxin III protein [Rhizobium etli Brasil 5] Length = 59 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/59 (88%), Positives = 55/59 (93%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPE P +AIKPDT Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPESPAEAIKPDT 59 >gi|119897322|ref|YP_932535.1| ferredoxin [Azoarcus sp. BH72] gi|119669735|emb|CAL93648.1| probable ferredoxin [Azoarcus sp. BH72] Length = 107 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTE+CI CK+TDCV+VCPVDCF EGENFL I P+ECIDC +C ECPV+AI + D Sbjct: 1 MAYVVTESCIRCKYTDCVDVCPVDCFREGENFLVIDPEECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+E A W I +KE LP A + VK K Sbjct: 61 VPADQQQFIALNAELARTWKPIVERKEPLPDAEQWAKVKGK 101 >gi|91983688|gb|ABE68850.1| FdxA [Pseudomonas sp. Q37-87] Length = 92 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 2/86 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEY 73 DCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E ++++N+E Sbjct: 1 DCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENFIELNAEL 60 Query: 74 ATQWPNITTKKESLPSAAKMDGVKQK 99 A WPNIT KK++LP A + DG K Sbjct: 61 ADIWPNITEKKDALPDAEEWDGKTGK 86 >gi|91789908|ref|YP_550860.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91699133|gb|ABE45962.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 109 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 74/109 (67%), Gaps = 5/109 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+ CI CK+TDCV+VCPVDCF EG +FL I PDECIDC VC PECPV+AI DT+ Sbjct: 1 MTHVVTDACIKCKYTDCVDVCPVDCFREGPDFLVIDPDECIDCAVCIPECPVNAIYADTD 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 PG + +L++N A WP ++ + LP+A + K K K S N Sbjct: 61 TPGQFQPFLELNERLAKLWPTLSRRTAPLPTAEQW---KDKTGKLASVN 106 >gi|57339928|gb|AAW49951.1| hypothetical protein FTT1764 [synthetic construct] Length = 142 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/110 (55%), Positives = 68/110 (61%), Gaps = 3/110 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTE+CI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPV+AIK D Sbjct: 27 MPFVVTESCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVNAIKSSDD 86 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E L +N E A WPNI K E A V K KY P Sbjct: 87 LSENEEQMLDLNRELAGIWPNIVEKCEPCEDADNWASVPDKL-KYLEKYP 135 >gi|152982663|ref|YP_001352409.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282740|gb|ABR91150.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 107 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 75/104 (72%), Gaps = 5/104 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE+CILC++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTESCILCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 ++++K+N + + +WP+IT K P A+ + K K +K Sbjct: 61 VPADQQVFIKLNVDLSREWPSITKTK---PPMAEAEEWKDKTDK 101 >gi|113868553|ref|YP_727042.1| ferredoxin [Ralstonia eutropha H16] gi|113527329|emb|CAJ93674.1| Ferredoxin [Ralstonia eutropha H16] Length = 107 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++ +N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFINLNAELARNWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|194290186|ref|YP_002006093.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193224021|emb|CAQ70030.1| putative FERREDOXIN PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 107 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++++N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFIELNAELARAWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|73541973|ref|YP_296493.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72119386|gb|AAZ61649.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 107 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++ +N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFIDLNAELARNWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|300310955|ref|YP_003775047.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] gi|300073740|gb|ADJ63139.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 107 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT++C+ C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI + D Sbjct: 1 MTHVVTDSCVRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + ++ +N+E + WP+IT K LP A Sbjct: 61 VPADQQQYIALNAELSRSWPSITKTKAPLPEA 92 >gi|56708759|ref|YP_170655.1| ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89255529|ref|YP_512890.1| ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110671231|ref|YP_667788.1| ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115314046|ref|YP_762769.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118498303|ref|YP_899353.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. novicida U112] gi|134301185|ref|YP_001121153.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. tularensis WY96-3418] gi|167010305|ref|ZP_02275236.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. holarctica FSC200] gi|169656480|ref|YP_001427532.2| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187930966|ref|YP_001890950.1| ferredoxin-1 [Francisella tularensis subsp. mediasiatica FSC147] gi|194323887|ref|ZP_03057662.1| ferredoxin-1 [Francisella tularensis subsp. novicida FTE] gi|208780133|ref|ZP_03247476.1| ferredoxin-1 [Francisella novicida FTG] gi|224457976|ref|ZP_03666449.1| ferredoxin-1 [Francisella tularensis subsp. tularensis MA00-2987] gi|254366956|ref|ZP_04982993.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|254368509|ref|ZP_04984526.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|254371377|ref|ZP_04987378.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|254371971|ref|ZP_04987464.1| ferredoxin [Francisella tularensis subsp. novicida GA99-3549] gi|254375113|ref|ZP_04990593.1| 4Fe-4S binding domain protein [Francisella novicida GA99-3548] gi|254875633|ref|ZP_05248343.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|290954290|ref|ZP_06558911.1| ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|295312297|ref|ZP_06803087.1| ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|54112673|gb|AAV28970.1| NT02FT0365 [synthetic construct] gi|56605251|emb|CAG46397.1| Ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89143360|emb|CAJ78530.1| Ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110321564|emb|CAL09780.1| Ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115128945|gb|ABI82132.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118424209|gb|ABK90599.1| 4Fe-4S ferredoxin [Francisella novicida U112] gi|134048962|gb|ABO46033.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134252783|gb|EBA51877.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|151569616|gb|EDN35270.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|151569702|gb|EDN35356.1| ferredoxin [Francisella novicida GA99-3549] gi|151572831|gb|EDN38485.1| 4Fe-4S binding domain protein [Francisella novicida GA99-3548] gi|157121403|gb|EDO65604.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|164551548|gb|ABU60576.2| 4Fe-4S binding domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187711875|gb|ACD30172.1| ferredoxin-1 [Francisella tularensis subsp. mediasiatica FSC147] gi|194321784|gb|EDX19267.1| ferredoxin-1 [Francisella tularensis subsp. novicida FTE] gi|208744137|gb|EDZ90438.1| ferredoxin-1 [Francisella novicida FTG] gi|254841632|gb|EET20068.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|282160082|gb|ADA79473.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. tularensis NE061598] gi|332184867|gb|AEE27121.1| Ferredoxin [Francisella cf. novicida 3523] gi|332679040|gb|AEE88169.1| Ferredoxin [Francisella cf. novicida Fx1] Length = 107 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/106 (56%), Positives = 67/106 (63%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTE+CI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPV+AIK D Sbjct: 1 MPFVVTESCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVNAIKSSDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 E L +N E A WPNI K E A V K KY Sbjct: 61 LSENEEQMLDLNRELAGIWPNIVEKCEPCEDADNWASVPDKL-KYL 105 >gi|332529166|ref|ZP_08405130.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] gi|332041389|gb|EGI77751.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] Length = 109 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI + D Sbjct: 1 MTHVVTEACIRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSA 90 G +K+N+E A W +IT +K +LP A Sbjct: 61 VPSGQMHMIKLNAELARAPGWKSITKRKAALPDA 94 >gi|109896757|ref|YP_660012.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas atlantica T6c] gi|109699038|gb|ABG38958.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudoalteromonas atlantica T6c] Length = 107 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +CEPECP AI D + Sbjct: 1 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCALCEPECPAKAIFQDDK 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG E + ++N+E + WPNI A + DGV K E Sbjct: 61 LPPGQEAFNELNAELSKIWPNIIEVIPPPADAKEWDGVPNKIE 103 >gi|56478120|ref|YP_159709.1| ferredoxin [Aromatoleum aromaticum EbN1] gi|56314163|emb|CAI08808.1| Ferredoxin [Aromatoleum aromaticum EbN1] Length = 107 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTE CI CK+TDCV+VCPVDCF EG NFLAI P ECIDC +C ECPV+AI + D Sbjct: 1 MTYVVTEACIRCKYTDCVDVCPVDCFREGANFLAIDPTECIDCTLCVAECPVEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 G ++ +N+E A QW I +K+ LP A Sbjct: 61 VPEGQRHFIALNAELAQQWKPIVERKDPLPDA 92 >gi|325982038|ref|YP_004294440.1| Ferredoxin, C-terminal protein [Nitrosomonas sp. AL212] gi|325531557|gb|ADZ26278.1| Ferredoxin, C-terminal protein [Nitrosomonas sp. AL212] Length = 107 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI + D Sbjct: 1 MAYVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 ++ +N+E + +W I KK++LP A VK K ++ Sbjct: 61 VPDEQTHFISLNAELSKEWRPIIEKKDALPDADDWASVKDKLDQ 104 >gi|33594451|ref|NP_882095.1| ferredoxin [Bordetella pertussis Tohama I] gi|33564526|emb|CAE43841.1| ferredoxin [Bordetella pertussis Tohama I] gi|332383862|gb|AEE68709.1| ferredoxin [Bordetella pertussis CS] Length = 107 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E + ++P+I+ K+ L A + +GV+ K + Sbjct: 61 VPQDQVPFIALNVELSAEFPSISRAKKPLEDADQWNGVQDKLQ 103 >gi|221066142|ref|ZP_03542247.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|264679310|ref|YP_003279217.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|299533455|ref|ZP_07046836.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] gi|220711165|gb|EED66533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|262209823|gb|ACY33921.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|298718561|gb|EFI59537.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] Length = 109 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSEYAT--QWPNITTKKESLPSAAKMDGVKQKYE 101 P +L ++K+N + + W +IT +K SLP A + +G K + Sbjct: 61 VPADQLAFIKLNVDLSQLKSWKSITKRKASLPDADEWNGKPNKVD 105 >gi|15640822|ref|NP_230453.1| ferredoxin [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585764|ref|ZP_01675559.1| ferredoxin [Vibrio cholerae 2740-80] gi|121725986|ref|ZP_01679285.1| ferredoxin [Vibrio cholerae V52] gi|147673974|ref|YP_001216287.1| ferredoxin [Vibrio cholerae O395] gi|153800583|ref|ZP_01955169.1| ferredoxin [Vibrio cholerae MZO-3] gi|153817247|ref|ZP_01969914.1| ferredoxin [Vibrio cholerae NCTC 8457] gi|153821403|ref|ZP_01974070.1| ferredoxin [Vibrio cholerae B33] gi|153824599|ref|ZP_01977266.1| ferredoxin [Vibrio cholerae MZO-2] gi|153828258|ref|ZP_01980925.1| ferredoxin [Vibrio cholerae 623-39] gi|227080983|ref|YP_002809534.1| ferredoxin [Vibrio cholerae M66-2] gi|229505581|ref|ZP_04395091.1| ferredoxin [Vibrio cholerae BX 330286] gi|229510747|ref|ZP_04400226.1| ferredoxin [Vibrio cholerae B33] gi|229513058|ref|ZP_04402524.1| ferredoxin [Vibrio cholerae TMA 21] gi|229517868|ref|ZP_04407312.1| ferredoxin [Vibrio cholerae RC9] gi|229525447|ref|ZP_04414852.1| ferredoxin [Vibrio cholerae bv. albensis VL426] gi|229530070|ref|ZP_04419460.1| ferredoxin [Vibrio cholerae 12129(1)] gi|229608599|ref|YP_002879247.1| ferredoxin [Vibrio cholerae MJ-1236] gi|254285518|ref|ZP_04960482.1| ferredoxin [Vibrio cholerae AM-19226] gi|254847941|ref|ZP_05237291.1| ferredoxin [Vibrio cholerae MO10] gi|258627223|ref|ZP_05722011.1| Ferredoxin [Vibrio mimicus VM603] gi|297581203|ref|ZP_06943127.1| ferredoxin [Vibrio cholerae RC385] gi|298499064|ref|ZP_07008871.1| ferredoxin [Vibrio cholerae MAK 757] gi|9655253|gb|AAF93968.1| ferredoxin [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550127|gb|EAX60143.1| ferredoxin [Vibrio cholerae 2740-80] gi|121631468|gb|EAX63838.1| ferredoxin [Vibrio cholerae V52] gi|124123872|gb|EAY42615.1| ferredoxin [Vibrio cholerae MZO-3] gi|126512163|gb|EAZ74757.1| ferredoxin [Vibrio cholerae NCTC 8457] gi|126521113|gb|EAZ78336.1| ferredoxin [Vibrio cholerae B33] gi|146315857|gb|ABQ20396.1| ferredoxin [Vibrio cholerae O395] gi|148876212|gb|EDL74347.1| ferredoxin [Vibrio cholerae 623-39] gi|149741817|gb|EDM55846.1| ferredoxin [Vibrio cholerae MZO-2] gi|150424380|gb|EDN16317.1| ferredoxin [Vibrio cholerae AM-19226] gi|227008871|gb|ACP05083.1| ferredoxin [Vibrio cholerae M66-2] gi|227012628|gb|ACP08838.1| ferredoxin [Vibrio cholerae O395] gi|229333844|gb|EEN99330.1| ferredoxin [Vibrio cholerae 12129(1)] gi|229339028|gb|EEO04045.1| ferredoxin [Vibrio cholerae bv. albensis VL426] gi|229344583|gb|EEO09557.1| ferredoxin [Vibrio cholerae RC9] gi|229349951|gb|EEO14905.1| ferredoxin [Vibrio cholerae TMA 21] gi|229350712|gb|EEO15653.1| ferredoxin [Vibrio cholerae B33] gi|229357804|gb|EEO22721.1| ferredoxin [Vibrio cholerae BX 330286] gi|229371254|gb|ACQ61677.1| ferredoxin [Vibrio cholerae MJ-1236] gi|254843646|gb|EET22060.1| ferredoxin [Vibrio cholerae MO10] gi|258580525|gb|EEW05486.1| Ferredoxin [Vibrio mimicus VM603] gi|297534519|gb|EFH73356.1| ferredoxin [Vibrio cholerae RC385] gi|297543397|gb|EFH79447.1| ferredoxin [Vibrio cholerae MAK 757] gi|327483585|gb|AEA77992.1| ferredoxin [Vibrio cholerae LMA3894-4] Length = 107 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++++N+E A WPN+T K ++ AAK DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKLD 103 >gi|30248037|ref|NP_840107.1| 7Fe ferredoxin [Nitrosomonas europaea ATCC 19718] gi|30179922|emb|CAD83917.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Nitrosomonas europaea ATCC 19718] Length = 107 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 2/104 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI + D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 ++ +N+E + W I KK++LP A + V K +K Sbjct: 61 VPEDQRQFIALNAELSKIWDPIIEKKDALPDADEWASVTDKLDK 104 >gi|71278991|ref|YP_269613.1| ferredoxin, 4Fe-4S [Colwellia psychrerythraea 34H] gi|71144731|gb|AAZ25204.1| ferredoxin, 4Fe-4S [Colwellia psychrerythraea 34H] Length = 111 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCILCK+TDCV VCP D FYEG NFL I PD+CIDC +C ECP AI + E Sbjct: 1 MAFVVTDNCILCKYTDCVAVCPADAFYEGPNFLVISPDDCIDCDLCPVECPAGAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E A WP IT K L A K DGV K + Sbjct: 61 VPADQQEFIELNAELAKHWPRITEVKPPLEQAEKWDGVADKIQ 103 >gi|319762492|ref|YP_004126429.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|330825657|ref|YP_004388960.1| ferredoxin, C-terminal protein [Alicycliphilus denitrificans K601] gi|317117053|gb|ADU99541.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|329311029|gb|AEB85444.1| Ferredoxin, C-terminal protein [Alicycliphilus denitrificans K601] Length = 107 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVVENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCVPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P +L ++KIN+E ++ +IT +K +LP A + +G K + Sbjct: 61 LPSDQLAFIKINAELTPKFKSITKRKAALPDADEWNGTPGKLK 103 >gi|91199775|emb|CAI78130.1| putative ferredoxin [Streptomyces ambofaciens ATCC 23877] gi|126347479|emb|CAJ89187.1| putative ferredoxin [Streptomyces ambofaciens ATCC 23877] Length = 118 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 3/111 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +TYVV E CI C+ TDCV+VCPVDCF+ GEN L IHP ECIDCG C PECPV AI ++E Sbjct: 8 VTYVVAEPCIRCRTTDCVDVCPVDCFHAGENMLVIHPYECIDCGACVPECPVSAIFEESE 67 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + + ++N EYA +WP IT+K ++ V+ K +++F+P PG Sbjct: 68 LPAKWGEYTELNLEYADKWPVITSKADAPSDWENWRDVEPK-KQHFNPAPG 117 >gi|237653740|ref|YP_002890054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237624987|gb|ACR01677.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 107 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 8/104 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---- 56 MTYVVTE CI CK+TDCV+VCPVDCF EG NFL I P+ECIDC +C ECPV+AI Sbjct: 1 MTYVVTERCIRCKYTDCVDVCPVDCFREGPNFLVIDPEECIDCTLCVAECPVEAIYSEDD 60 Query: 57 -PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PD + G ++ +N+E A QW I +K+ LP A +K K Sbjct: 61 VPDDQKG---YIALNAELAKQWKPIVERKDPLPDADHWARIKGK 101 >gi|268318191|ref|YP_003291910.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodothermus marinus DSM 4252] gi|21389190|gb|AAM50525.1|AF515798_1 ferredoxin [Rhodothermus marinus] gi|262335725|gb|ACY49522.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodothermus marinus DSM 4252] Length = 118 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/96 (62%), Positives = 65/96 (67%), Gaps = 6/96 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAIHPDECIDC C P CPV+AI PD E Sbjct: 1 MPYVVCEPCINCKYTDCVEVCPVDCFYEGPNFLAIHPDECIDCNACVPTCPVEAIYPDDE 60 Query: 61 PGLEL--WLKINSEYATQWP----NITTKKESLPSA 90 E +++ N A QW NIT KK LP A Sbjct: 61 VPEEWQHYIEWNRYLAEQWKAMGYNITEKKGPLPDA 96 >gi|121611231|ref|YP_999038.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121555871|gb|ABM60020.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 109 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 4/109 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV+ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P +L ++K+N++ +A W +IT +K +LP A + +G K ++ Sbjct: 61 LPADQLAFIKLNADLAFAAGWKSITKRKGALPDADEWNGKPGKVDQLIR 109 >gi|317401942|gb|EFV82546.1| ferredoxin 1 [Achromobacter xylosoxidans C54] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P +L ++ +N+E + ++ +I+ K+ LP A + +G + K + Sbjct: 61 VPQDQLNFIALNAELSPEFASISRAKKPLPDADEWNGKQDKLQ 103 >gi|170727750|ref|YP_001761776.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169813097|gb|ACA87681.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VVT+NCI CK+TDCV VCPVD F+EG NFLAI+PD CIDC +C PEC AI + D Sbjct: 1 MAFVVTDNCIRCKYTDCVAVCPVDAFHEGPNFLAINPDVCIDCELCVPECAAAAIFQEDA 60 Query: 60 EP-GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 P G+E +L++N+E A WP IT ++ A + DGV+ K E Sbjct: 61 LPEGMEQYLELNAELAQIWPVITEVIDAPLDAEQWDGVEDKREHLI 106 >gi|88857416|ref|ZP_01132059.1| putative ferredoxin [Pseudoalteromonas tunicata D2] gi|88820613|gb|EAR30425.1| putative ferredoxin [Pseudoalteromonas tunicata D2] Length = 121 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VV +NCI CK+TDCV VCPVD F+EG NFLAI P CIDCG+CEPECP +AI + D Sbjct: 15 MAFVVGDNCIKCKYTDCVAVCPVDAFFEGPNFLAISPIICIDCGLCEPECPAEAIFQEDA 74 Query: 60 EPGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P + +L++N+E A WPNIT K A +GVK K + Sbjct: 75 LPAEQHQYLELNAELAEIWPNITQVKTPPADADSWNGVKDKLK 117 >gi|74316053|ref|YP_313793.1| 7Fe ferredoxin [Thiobacillus denitrificans ATCC 25259] gi|74055548|gb|AAZ95988.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Thiobacillus denitrificans ATCC 25259] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVT+ C+ CK+TDCV+VCPVDCF+EG NFLAI P+ECIDC +C ECPV+AI + D Sbjct: 1 MTYVVTDACVKCKYTDCVDVCPVDCFHEGPNFLAIDPEECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++ +N+E A W I + + LP A + GVK K Sbjct: 61 VPDDQRAYIALNAELAKAWKVIVERHDPLPDADEWAGVKDK 101 >gi|258619992|ref|ZP_05715032.1| Ferredoxin [Vibrio mimicus VM573] gi|258587725|gb|EEW12434.1| Ferredoxin [Vibrio mimicus VM573] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++++N+E A WPN+T K ++ A+K DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEEASKWDGVPNKLD 103 >gi|293603978|ref|ZP_06686391.1| O-succinylhomoserine sulfhydrylase [Achromobacter piechaudii ATCC 43553] gi|292817582|gb|EFF76650.1| O-succinylhomoserine sulfhydrylase [Achromobacter piechaudii ATCC 43553] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P +L ++ +N+E + ++ +I+ K+ LP A +G + K + Sbjct: 61 VPQDQLNFIALNAELSPEFASISRAKKPLPDADDWNGKQDKLQ 103 >gi|255021029|ref|ZP_05293082.1| ferredoxin, 4Fe-4S [Acidithiobacillus caldus ATCC 51756] gi|254969443|gb|EET26952.1| ferredoxin, 4Fe-4S [Acidithiobacillus caldus ATCC 51756] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +CEPECP +AI D + Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCEPECPAEAIFRDDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G E +L+IN+ A WP I KK + A VK K Sbjct: 61 LPEGQEEFLEINARLAKTWPPIIQKKAAPADADDWAKVKDK 101 >gi|114330158|ref|YP_746380.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosomonas eutropha C91] gi|114307172|gb|ABI58415.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nitrosomonas eutropha C91] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI + D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E + W I KK++LP A + V K + Sbjct: 61 VAEDQRRFIALNAELSKIWEPIIEKKDALPDADEWASVTDKLD 103 >gi|332304879|ref|YP_004432730.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172208|gb|AEE21462.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 130 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +CEPECP AI D + Sbjct: 24 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCALCEPECPAKAIYQDDK 83 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E + ++N+E + WPNI A + DGV K E Sbjct: 84 LPAGQEAFNELNAELSKIWPNIIEVIPPPADAKEWDGVPNKLE 126 >gi|119474975|ref|ZP_01615328.1| ferredoxin, 4Fe-4S [marine gamma proteobacterium HTCC2143] gi|119451178|gb|EAW32411.1| ferredoxin, 4Fe-4S [marine gamma proteobacterium HTCC2143] Length = 112 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE CI CK TDCV+VCPVDCF+EG NFL I+PD CIDC +C PECPVDAI + D Sbjct: 1 MTFVVTEQCIKCKFTDCVDVCPVDCFHEGPNFLVINPDGCIDCALCIPECPVDAIYEESD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + ++KIN++ + +WP I ++ L A Sbjct: 61 LPDEFQEYIKINADLSARWPEILATQDPLEDA 92 >gi|311104718|ref|YP_003977571.1| ferredoxin 2 [Achromobacter xylosoxidans A8] gi|310759407|gb|ADP14856.1| ferredoxin 2 [Achromobacter xylosoxidans A8] Length = 107 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P ++ ++ +N+E + ++ +I+ K+ LP A + +G + K + Sbjct: 61 VPQDQMNFIALNAELSPEFASISRAKKPLPDADEWNGKQDKLQ 103 >gi|229523379|ref|ZP_04412786.1| ferredoxin [Vibrio cholerae TM 11079-80] gi|229339742|gb|EEO04757.1| ferredoxin [Vibrio cholerae TM 11079-80] Length = 107 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++++N+E A WPN+T K ++ A K DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEDAVKWDGVPNKLD 103 >gi|50956566|gb|AAT90813.1| probable ferredoxin [uncultured proteobacterium QS1] Length = 124 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI C+HT CV++CP D F+ G NF+ I PDEC+DCG+C PECP +AI+P+++ Sbjct: 1 MTYVVTDNCIQCRHTSCVDICPADAFHLGPNFIVISPDECVDCGLCLPECPEEAIEPESQ 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +L++N+E A +WP I + E LP K + K Sbjct: 61 LNDSNYHFLRLNAELAERWPVILQRIEPLPDYQKWSRQENK 101 >gi|254455104|ref|ZP_05068540.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] gi|198263806|gb|EDY88077.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] Length = 78 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 45/77 (58%), Positives = 59/77 (76%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L IHPDECIDCGVCEPECP DAI DT+ G E WL++NS++A +WPNI + E+L +A Sbjct: 1 MLVIHPDECIDCGVCEPECPADAILADTDQGAETWLELNSKFAAKWPNIIQQSEALANAE 60 Query: 92 KMDGVKQKYEKYFSPNP 108 + DG++ K++KYFS P Sbjct: 61 EYDGMENKFDKYFSSKP 77 >gi|134094844|ref|YP_001099919.1| ferredoxin [Herminiimonas arsenicoxydans] gi|133738747|emb|CAL61794.1| Ferredoxin 1 [Herminiimonas arsenicoxydans] Length = 109 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 4/104 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTE+CI CK+TDCV VCP+DCF+EG NFLAI+PDECIDC VC PECPV+AI + Sbjct: 1 MPFVVTESCIQCKYTDCVAVCPMDCFFEGPNFLAINPDECIDCSVCVPECPVNAIIGAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKY 100 P + ++++N + W I +KE LP AK +K K Sbjct: 61 ISPEQQHFVELNRTLSRHPDWKRIRQQKEPLPEHAKWAELKDKL 104 >gi|163856039|ref|YP_001630337.1| ferredoxin 1 (FdI) [Bordetella petrii DSM 12804] gi|163259767|emb|CAP42068.1| Ferredoxin 1 (FdI) [Bordetella petrii] Length = 107 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E ++ I+ K+ LP A + +GV K + Sbjct: 61 VPQDQVQFIALNAELTPEFAPISRAKKPLPDADEWNGVPDKLQ 103 >gi|198283226|ref|YP_002219547.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668155|ref|YP_002425458.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247747|gb|ACH83340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520368|gb|ACK80954.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 107 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 67/101 (66%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +CEPECP AI D + Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCEPECPAGAIFRDDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G + + +IN+ A WP I KK + A VK K Sbjct: 61 MPDGQKEFEEINARLAKIWPAIIQKKAAPEDADAWLHVKDK 101 >gi|303257808|ref|ZP_07343818.1| ferredoxin, 4Fe-4S [Burkholderiales bacterium 1_1_47] gi|330998771|ref|ZP_08322499.1| ferredoxin-1 [Parasutterella excrementihominis YIT 11859] gi|302859411|gb|EFL82492.1| ferredoxin, 4Fe-4S [Burkholderiales bacterium 1_1_47] gi|329576268|gb|EGG57784.1| ferredoxin-1 [Parasutterella excrementihominis YIT 11859] Length = 109 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTE CILCK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MAHVVTEPCILCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPTNAIMAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E A WP+IT K A K V K + Sbjct: 61 VPEDQQEFIALNAELARVWPSITRMKPHTDEAEKWRDVLDKRQ 103 >gi|332992178|gb|AEF02233.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Alteromonas sp. SN2] Length = 108 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV VCPVD F+EG NFLAI P CIDC +C PECP DAI DT Sbjct: 1 MTFVVTDNCINCKYTDCVAVCPVDAFFEGPNFLAIDPAICIDCALCVPECPADAIVQDTH 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + +L IN E A +WPNI K A +GV K Sbjct: 61 LTDAQKPYLAINEELAAKWPNIIELKAPPEDADVWNGVPDKL 102 >gi|224826355|ref|ZP_03699457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] gi|224601456|gb|EEG07637.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] Length = 107 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 5/107 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE CI CK+TDCV+VCPVDCF+EG NFLAI PDECIDC +C ECPV+AI + + Sbjct: 1 MAYVVTEACIKCKYTDCVDVCPVDCFHEGPNFLAIDPDECIDCTLCVAECPVEAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLPSA---AKMDGVKQKYEK 102 P +L +++IN + WP I KK+ LP AK+ G Q E+ Sbjct: 61 VPADQLHFIEINDRLSKVWPVIAAKKDPLPDHEDWAKVTGKTQYLEE 107 >gi|94311387|ref|YP_584597.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93355239|gb|ABF09328.1| Ferredoxin [Cupriavidus metallidurans CH34] Length = 107 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI C++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI + + Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG + ++++N+E + WP+IT K L A + K + Sbjct: 61 VPGDQQQFIELNAELSRIWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|115379402|ref|ZP_01466505.1| ferredoxin [Stigmatella aurantiaca DW4/3-1] gi|310822281|ref|YP_003954639.1| ferrodoxin, 4fe-4S [Stigmatella aurantiaca DW4/3-1] gi|115363589|gb|EAU62721.1| ferredoxin [Stigmatella aurantiaca DW4/3-1] gi|309395353|gb|ADO72812.1| Ferrodoxin, 4Fe-4S [Stigmatella aurantiaca DW4/3-1] Length = 113 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 3/102 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPV+CFYEG NFL IHPDECIDCG CEP CP AI P++E Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVNCFYEGANFLVIHPDECIDCGACEPVCPTKAIFPESE 60 Query: 61 --PGLELWLKINSEYAT-QWPNITTKKESLPSAAKMDGVKQK 99 + + +N + + WPN+ K LP A + K K Sbjct: 61 LPDKWKEYKDLNDKLSKGGWPNLAEKLSELPEADEYKDKKDK 102 >gi|152982564|ref|YP_001353330.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282641|gb|ABR91051.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 114 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 4/104 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTE CI CK+TDCV VCP+DCF+EG NFLAI+PDECIDC VC PECPV+AI TE Sbjct: 1 MPFVVTEACIQCKYTDCVVVCPMDCFFEGPNFLAINPDECIDCSVCVPECPVNAIIGATE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKY 100 P + ++ +N E + W I+ KE +P K VK K Sbjct: 61 VAPEQQHFVALNRELSQHPDWKRISKPKEPMPGHEKWAQVKDKL 104 >gi|91788203|ref|YP_549155.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91697428|gb|ABE44257.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 109 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT++V+E+CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI + + Sbjct: 1 MTHIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 61 -PGLEL-WLKINSEY--ATQWPNITTKKESLPSA 90 P +L ++K+N+E A W +IT +K++LP A Sbjct: 61 VPADQLQFIKLNAELSRAAGWKSITKRKDALPDA 94 >gi|268317837|ref|YP_003291556.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335371|gb|ACY49168.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodothermus marinus DSM 4252] Length = 118 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/96 (61%), Positives = 64/96 (66%), Gaps = 6/96 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVD FYEG NFLAIHPDECIDC C P CP +AI PD E Sbjct: 1 MPYVVCEPCINCKYTDCVEVCPVDAFYEGPNFLAIHPDECIDCNACVPVCPTEAIYPDDE 60 Query: 61 PGLEL--WLKINSEYATQWP----NITTKKESLPSA 90 E +++ N A QW NIT KKE LP A Sbjct: 61 VPEEWQHYIEWNRYLAEQWKAQGFNITQKKEPLPEA 96 >gi|254245946|ref|ZP_04939267.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|124870722|gb|EAY62438.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] Length = 134 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 28 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 87 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + ++N+E A WP+IT K + A + V+ K Sbjct: 88 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQDK 128 >gi|206559364|ref|YP_002230125.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|206561234|ref|YP_002231999.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|198035402|emb|CAR51278.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|198037276|emb|CAR53198.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] Length = 107 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + + ++N+E A WP+IT K + A + V++K Sbjct: 61 VPTDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQEK 101 >gi|167586594|ref|ZP_02378982.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ubonensis Bu] Length = 107 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPSDQQQFTALNAELAKNWPSITKTKPAPADADEWKDVQEK 101 >gi|167720232|ref|ZP_02403468.1| ferredoxin [Burkholderia pseudomallei DM98] gi|167846357|ref|ZP_02471865.1| ferredoxin [Burkholderia pseudomallei B7210] gi|167903326|ref|ZP_02490531.1| ferredoxin [Burkholderia pseudomallei NCTC 13177] Length = 107 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 4/102 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGL 63 E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQ 60 Query: 64 ELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 RHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|319943296|ref|ZP_08017579.1| ferredoxin [Lautropia mirabilis ATCC 51599] gi|319743838|gb|EFV96242.1| ferredoxin [Lautropia mirabilis ATCC 51599] Length = 107 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++V +NCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI + + Sbjct: 1 MAHIVLDNCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCVPECPAEAIVAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG E ++ IN+E A WP IT K L A +G K + Sbjct: 61 VPGDQENFIAINAEKAPNWPAITRSKSPLEDADDWNGTPNKLQ 103 >gi|238650840|ref|YP_002916695.1| ferredoxin [Rickettsia peacockii str. Rustic] gi|238624938|gb|ACR47644.1| ferredoxin [Rickettsia peacockii str. Rustic] Length = 108 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 9/104 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKE--SLPSAAKMDGV 96 P++ PGL W++ ++ W NIT KK +P KM + Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKLLCLMPINLKMRKI 103 >gi|115351029|ref|YP_772868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria AMMD] gi|170700862|ref|ZP_02891850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] gi|171317138|ref|ZP_02906340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|172060034|ref|YP_001807686.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria MC40-6] gi|115281017|gb|ABI86534.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ambifaria AMMD] gi|170134225|gb|EDT02565.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] gi|171097705|gb|EDT42535.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|171992551|gb|ACB63470.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MC40-6] Length = 107 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + ++N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQEK 101 >gi|167744446|ref|ZP_02417220.1| putative ferredoxin [Burkholderia pseudomallei 14] Length = 107 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 4/102 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGL 63 E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQ 60 Query: 64 ELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 RPFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|167895283|ref|ZP_02482685.1| putative ferredoxin [Burkholderia pseudomallei 7894] gi|167919911|ref|ZP_02507002.1| putative ferredoxin [Burkholderia pseudomallei BCC215] gi|237813231|ref|YP_002897682.1| ferredoxin [Burkholderia pseudomallei MSHR346] gi|237504029|gb|ACQ96347.1| ferredoxin [Burkholderia pseudomallei MSHR346] Length = 107 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQEK 101 >gi|107022176|ref|YP_620503.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia AU 1054] gi|116689122|ref|YP_834745.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia HI2424] gi|170732410|ref|YP_001764357.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia MC0-3] gi|105892365|gb|ABF75530.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia cenocepacia AU 1054] gi|116647211|gb|ABK07852.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia cenocepacia HI2424] gi|169815652|gb|ACA90235.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia cenocepacia MC0-3] Length = 107 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 70/102 (68%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + ++N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQDKL 102 >gi|255020217|ref|ZP_05292286.1| putative ferredoxin [Acidithiobacillus caldus ATCC 51756] gi|254970359|gb|EET27852.1| putative ferredoxin [Acidithiobacillus caldus ATCC 51756] Length = 108 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVVTENCI CK+TDC EVCPV+CF+EG NFLAI P ECIDC C PECP DAI + D Sbjct: 1 MTYVVTENCIQCKYTDCAEVCPVECFHEGPNFLAIDPVECIDCAACVPECPADAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 + +N+E + WP I KK + A + +G Sbjct: 61 VPEDQRDFTALNAELSKHWPVILRKKAAPADADEWNG 97 >gi|241767844|ref|ZP_04765425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] gi|241361074|gb|EER57771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] Length = 109 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 53/99 (53%), Positives = 73/99 (73%), Gaps = 4/99 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV+ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI + + Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 61 -PGLEL-WLKINSE--YATQWPNITTKKESLPSAAKMDG 95 P ++ ++K+N++ +A W +IT +K +LP A + +G Sbjct: 61 LPADQIAFIKLNADLAFADGWKSITKRKPALPDADEWNG 99 >gi|221201316|ref|ZP_03574355.1| putative ferredoxin [Burkholderia multivorans CGD2M] gi|221208796|ref|ZP_03581794.1| putative ferredoxin [Burkholderia multivorans CGD2] gi|221214124|ref|ZP_03587097.1| putative ferredoxin [Burkholderia multivorans CGD1] gi|221166301|gb|EED98774.1| putative ferredoxin [Burkholderia multivorans CGD1] gi|221171252|gb|EEE03701.1| putative ferredoxin [Burkholderia multivorans CGD2] gi|221178584|gb|EEE10992.1| putative ferredoxin [Burkholderia multivorans CGD2M] Length = 136 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 30 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 89 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 90 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDK 130 >gi|134295130|ref|YP_001118865.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia vietnamiensis G4] gi|134138287|gb|ABO54030.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia vietnamiensis G4] gi|325527386|gb|EGD04739.1| ferredoxin [Burkholderia sp. TJI49] Length = 107 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKNWPSITKTKPAPADADEWKDVQDKL 102 >gi|149187260|ref|ZP_01865558.1| ferredoxin [Vibrio shilonii AK1] gi|148838796|gb|EDL55735.1| ferredoxin [Vibrio shilonii AK1] Length = 107 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D FYEG NF+ I P +CIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFYEGPNFMVISPIDCIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++++N+E A WPNIT K ++ A K +GV K Sbjct: 61 LTEDQQVFIELNAELAEVWPNITEVKPAMDEAEKWNGVPNK 101 >gi|53725758|ref|YP_102306.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|254199200|ref|ZP_04905566.1| ferredoxin [Burkholderia mallei FMH] gi|52429181|gb|AAU49774.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|147748796|gb|EDK55870.1| ferredoxin [Burkholderia mallei FMH] Length = 107 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQHFTALNAELAKDWPSITKTKPAPADANEWKDVQEK 101 >gi|53720069|ref|YP_109055.1| ferredoxin [Burkholderia pseudomallei K96243] gi|76809315|ref|YP_334313.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|124383747|ref|YP_001028729.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126441887|ref|YP_001059835.1| ferredoxin [Burkholderia pseudomallei 668] gi|126453420|ref|YP_001067122.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|134277063|ref|ZP_01763778.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|167002775|ref|ZP_02268565.1| ferredoxin [Burkholderia mallei PRL-20] gi|167720598|ref|ZP_02403834.1| putative ferredoxin [Burkholderia pseudomallei DM98] gi|167739587|ref|ZP_02412361.1| putative ferredoxin [Burkholderia pseudomallei 14] gi|167816790|ref|ZP_02448470.1| putative ferredoxin [Burkholderia pseudomallei 91] gi|167825197|ref|ZP_02456668.1| putative ferredoxin [Burkholderia pseudomallei 9] gi|167846694|ref|ZP_02472202.1| putative ferredoxin [Burkholderia pseudomallei B7210] gi|167903669|ref|ZP_02490874.1| putative ferredoxin [Burkholderia pseudomallei NCTC 13177] gi|167911917|ref|ZP_02499008.1| putative ferredoxin [Burkholderia pseudomallei 112] gi|217420695|ref|ZP_03452200.1| ferredoxin-1 [Burkholderia pseudomallei 576] gi|242316088|ref|ZP_04815104.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|254191212|ref|ZP_04897716.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|254195729|ref|ZP_04902155.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|254261489|ref|ZP_04952543.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|262193289|ref|YP_001081365.2| ferredoxin [Burkholderia mallei NCTC 10247] gi|52210483|emb|CAH36466.1| ferredoxin [Burkholderia pseudomallei K96243] gi|76578768|gb|ABA48243.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|124291767|gb|ABN01036.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126221380|gb|ABN84886.1| ferredoxin-1 [Burkholderia pseudomallei 668] gi|126227062|gb|ABN90602.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|134250713|gb|EBA50792.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|157938884|gb|EDO94554.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|169652474|gb|EDS85167.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|217396107|gb|EEC36124.1| ferredoxin-1 [Burkholderia pseudomallei 576] gi|242139327|gb|EES25729.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|243061597|gb|EES43783.1| ferredoxin [Burkholderia mallei PRL-20] gi|254220178|gb|EET09562.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|261835061|gb|ABO05614.2| ferredoxin [Burkholderia mallei NCTC 10247] Length = 107 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQHFTALNAELAKDWPSITKTKPAPADADEWKDVQEK 101 >gi|254252880|ref|ZP_04946198.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] gi|124895489|gb|EAY69369.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] Length = 134 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 28 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 87 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 88 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDK 128 >gi|78065684|ref|YP_368453.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] gi|77966429|gb|ABB07809.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] Length = 107 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQDKL 102 >gi|34581123|ref|ZP_00142603.1| ferredoxin [Rickettsia sibirica 246] gi|28262508|gb|EAA26012.1| ferredoxin [Rickettsia sibirica 246] Length = 127 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 9/104 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+P+ECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPNECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKE--SLPSAAKMDGV 96 P++ PGL W++ ++ W NIT KK +P KM + Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKLLCLMPINLKMRKI 103 >gi|149911417|ref|ZP_01900035.1| putative ferredoxin [Moritella sp. PE36] gi|149805525|gb|EDM65530.1| putative ferredoxin [Moritella sp. PE36] Length = 107 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CKH DCV VCP D F+EG NFL I P CIDCG+C PECPVDAI + E Sbjct: 1 MAFVVTENCIKCKHGDCVPVCPADAFHEGPNFLVIDPIACIDCGLCVPECPVDAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++++IN E + WP IT K E A DGV+ K Sbjct: 61 VPEDQQVFIEINEELSELWPVITEKCEPPADADDWDGVENKL 102 >gi|83720589|ref|YP_442231.1| ferredoxin [Burkholderia thailandensis E264] gi|167581116|ref|ZP_02373990.1| ferredoxin [Burkholderia thailandensis TXDOH] gi|167619199|ref|ZP_02387830.1| ferredoxin [Burkholderia thailandensis Bt4] gi|257138424|ref|ZP_05586686.1| ferredoxin [Burkholderia thailandensis E264] gi|83654414|gb|ABC38477.1| ferredoxin [Burkholderia thailandensis E264] Length = 107 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 PG + + ++N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNAELAKAWPSITKTKPAPADADEWKDVQDK 101 >gi|167837385|ref|ZP_02464268.1| 4Fe-4S ferredoxin [Burkholderia thailandensis MSMB43] Length = 107 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQDKL 102 >gi|332284971|ref|YP_004416882.1| ferredoxin [Pusillimonas sp. T7-7] gi|330428924|gb|AEC20258.1| ferredoxin [Pusillimonas sp. T7-7] Length = 107 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTENCI CK TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHVVTENCIKCKFTDCVDVCPVDCFREGANFLVIDPDECIDCAVCVPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N+E ++ I K+ LP A +G+ K + Sbjct: 61 VPQDQISFIELNAELTPEFGMINRSKKPLPEADDWNGMPDKLK 103 >gi|319793283|ref|YP_004154923.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315595746|gb|ADU36812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 109 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/94 (57%), Positives = 69/94 (73%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV+E CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI + + Sbjct: 1 MTHVVSEACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQ--WPNITTKKESLPSA 90 P ++ ++KIN+E A W +IT +K +LP A Sbjct: 61 LPANQIAFIKINAELALADGWKSITKRKPALPDA 94 >gi|161525374|ref|YP_001580386.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189349889|ref|YP_001945517.1| ferredoxin [Burkholderia multivorans ATCC 17616] gi|160342803|gb|ABX15889.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia multivorans ATCC 17616] gi|189333911|dbj|BAG42981.1| ferredoxin [Burkholderia multivorans ATCC 17616] Length = 107 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDKL 102 >gi|187926655|ref|YP_001893000.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|241666167|ref|YP_002984526.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] gi|187728409|gb|ACD29573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|240868194|gb|ACS65854.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 112 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI P E Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICVPECPVGAIYPAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N++ + + WP +T + LP A VK K + Sbjct: 61 VPADQQDFIALNAQLSRRADWPRLTKVQPPLPDHAHWAQVKDKRD 105 >gi|239815386|ref|YP_002944296.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239801963|gb|ACS19030.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 109 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV+E CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI + + Sbjct: 1 MTHVVSEACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQ--WPNITTKKESLPSA 90 P ++ ++K+N+E A W +IT +K +LP A Sbjct: 61 LPANQIAFIKLNAELAVADGWKSITKRKPALPDA 94 >gi|119468754|ref|ZP_01611806.1| putative ferredoxin [Alteromonadales bacterium TW-7] gi|119447810|gb|EAW29076.1| putative ferredoxin [Alteromonadales bacterium TW-7] Length = 107 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PECP +AI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECPAEAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A WP IT K + A +GV+ K + Sbjct: 61 LPDSQKEFTELNAELALIWPRITQVKSAPDDADTWNGVENKLK 103 >gi|77362322|ref|YP_341896.1| putative ferredoxin [Pseudoalteromonas haloplanktis TAC125] gi|76877233|emb|CAI89450.1| putative ferredoxin [Pseudoalteromonas haloplanktis TAC125] Length = 107 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECSADAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A WP IT K + A + +G+ K + Sbjct: 61 LPESQQEFTELNAELALIWPRITQAKPAPADADEWNGIADKLK 103 >gi|291613179|ref|YP_003523336.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291583291|gb|ADE10949.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 107 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTENCI CK+TDCV+VCPVDCF+EG NFL I P ECIDC +C ECP +AI + D Sbjct: 1 MAYVVTENCIKCKYTDCVDVCPVDCFHEGPNFLVIDPGECIDCTLCVAECPANAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E A QW I KK + A + VK K Sbjct: 61 VPVDQRQFIALNAELAKQWKVIVEKKAAPADADEWRDVKDKLR 103 >gi|254428704|ref|ZP_05042411.1| 4Fe-4S binding domain protein [Alcanivorax sp. DG881] gi|196194873|gb|EDX89832.1| 4Fe-4S binding domain protein [Alcanivorax sp. DG881] Length = 90 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/88 (57%), Positives = 64/88 (72%), Gaps = 2/88 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 +EVCPVDCFYEGENFL IHPDECIDC +CEPECPV+AI + E + +L+IN++ A Sbjct: 1 MEVCPVDCFYEGENFLVIHPDECIDCALCEPECPVNAIFSEDELPDDQQDFLEINADLAE 60 Query: 76 QWPNITTKKESLPSAAKMDGVKQKYEKY 103 +WPNIT K++ A + DGV K EK Sbjct: 61 KWPNITEMKDAPDDAEEWDGVPNKREKL 88 >gi|89901238|ref|YP_523709.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89345975|gb|ABD70178.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 109 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+ VTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI + D Sbjct: 1 MTHTVTEACIKCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYAT--QWPNITTKKESLPSA 90 + KIN+E A W IT +K +LP A Sbjct: 61 VPKDQQHMTKINAELAKLPGWKTITKRKPALPEA 94 >gi|330815952|ref|YP_004359657.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] gi|327368345|gb|AEA59701.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] Length = 107 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFAPLNAELAKLWPSITKTKPAPGDADEWKDVQDKL 102 >gi|217968856|ref|YP_002354090.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|217506183|gb|ACK53194.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 117 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/115 (46%), Positives = 65/115 (56%), Gaps = 2/115 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV +CPVD F EG NFL I P+ECIDC +C ECPVDAI P+ E Sbjct: 1 MTHVVTEACIRCKYTDCVSMCPVDAFREGPNFLVIDPEECIDCTLCVAECPVDAIVPEDE 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 E +L +N+ A WP I LP A V K + G + Sbjct: 61 LSDEQREYLALNAALAKDWPRIVEAHAPLPDADAWAKVADKRAWLDTARAGDPDA 115 >gi|238026583|ref|YP_002910814.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] gi|237875777|gb|ACR28110.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] Length = 107 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTPLNAELAKLWPSITKTKPAPGDADEWKDVQDKL 102 >gi|167563567|ref|ZP_02356483.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia oklahomensis EO147] gi|167570727|ref|ZP_02363601.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia oklahomensis C6786] Length = 107 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 PG + + ++N++ A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNADLAKIWPSITKTKPAPADADEWKDVQDKL 102 >gi|117573290|gb|ABK40821.1| ferredoxin [Pseudomonas sp. C10-181] Length = 89 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 2/83 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQ 76 EVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E ++ +N+E A Sbjct: 1 EVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGMENFIVLNAELADI 60 Query: 77 WPNITTKKESLPSAAKMDGVKQK 99 WPNIT KK++LP A + DG + K Sbjct: 61 WPNITEKKDALPDAEEWDGKEGK 83 >gi|300697403|ref|YP_003748064.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957] gi|299074127|emb|CBJ53671.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957] Length = 116 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 1 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAESD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF-SPNPGGK 111 ++ +N++ + + WP +T + L A+ VK K + +P PG + Sbjct: 61 VPADQREFIALNAQLSRRPDWPRLTQVQPPLADHARWAQVKDKRDTLLITPEPGTR 116 >gi|167816449|ref|ZP_02448129.1| putative ferredoxin [Burkholderia pseudomallei 91] gi|167894938|ref|ZP_02482340.1| putative ferredoxin [Burkholderia pseudomallei 7894] Length = 107 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 4/102 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGL 63 E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ E Sbjct: 1 MEGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQ 60 Query: 64 ELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 RHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|315123428|ref|YP_004065434.1| putative ferredoxin [Pseudoalteromonas sp. SM9913] gi|315017188|gb|ADT70525.1| putative ferredoxin [Pseudoalteromonas sp. SM9913] Length = 107 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECAADAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A WP IT K + A +GV K + Sbjct: 61 LPESQKEFTQLNAELAEIWPRITQVKPAPEDADSWNGVANKLK 103 >gi|121605331|ref|YP_982660.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120594300|gb|ABM37739.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polaromonas naphthalenivorans CJ2] Length = 109 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV++ CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI + + Sbjct: 1 MTHVVSDPCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 61 -PGLEL-WLKINSEYATQ--WPNITTKKESLPSA 90 P +L ++KIN++ + W +IT +K++LP A Sbjct: 61 LPSDQLHFIKINADLTSAPGWKSITKRKDALPDA 94 >gi|83749935|ref|ZP_00946892.1| Ferredoxin [Ralstonia solanacearum UW551] gi|83723395|gb|EAP70616.1| Ferredoxin [Ralstonia solanacearum UW551] Length = 145 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 5/117 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 28 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAEAD 87 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF-SPNPGGKN 112 ++ +N++ + + WP +T + L A+ VK K +P PG + Sbjct: 88 VPADQREFIALNAQLSRRPDWPRLTQVQPPLADHARWAQVKDKRSTLLIAPEPGTQT 144 >gi|260221336|emb|CBA29796.1| Ferredoxin-1 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 109 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/94 (55%), Positives = 64/94 (68%), Gaps = 4/94 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT++VTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MTHIVTEACIKCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYAT--QWPNITTKKESLPSA 90 + + +N+E A W +IT +K LP A Sbjct: 61 APKDQQHMIALNAELARLPGWKSITKRKAPLPDA 94 >gi|300693746|ref|YP_003749719.1| ferredoxin 1 [Ralstonia solanacearum PSI07] gi|299075783|emb|CBJ35088.1| Ferredoxin 1 [Ralstonia solanacearum PSI07] Length = 112 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI + D Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|309782798|ref|ZP_07677519.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] gi|308918576|gb|EFP64252.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] Length = 112 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI P E Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICVPECPVGAIYPAAE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N++ + + WP +T + L A VK K + Sbjct: 61 VPADQQDFIALNAQLSRRADWPRLTKVQAPLQDHAHWAQVKDKRD 105 >gi|114769350|ref|ZP_01446976.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] gi|114550267|gb|EAU53148.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] Length = 81 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/78 (60%), Positives = 54/78 (69%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L IHPDECIDCGVCEPECP DAI PDTEP E W++ N +Y+ WP I ++K LP A Sbjct: 1 MLVIHPDECIDCGVCEPECPADAILPDTEPDTEKWVEFNRKYSEIWPVIISQKTPLPDAE 60 Query: 92 KMDGVKQKYEKYFSPNPG 109 DG + K EKYFS PG Sbjct: 61 VRDGEEGKLEKYFSEKPG 78 >gi|319941592|ref|ZP_08015918.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] gi|319804962|gb|EFW01804.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] Length = 110 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV E CI CK TDCV+VCPVDCF EG NFL I PDECIDC VC PECP AI + D Sbjct: 1 MPHVVCEACIGCKRTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPEAAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++++N+E A +WP+IT +K A + GV K Sbjct: 61 VPEDQKEFIELNAELAREWPSITHRKPYADDADEWRGVPNK 101 >gi|302879644|ref|YP_003848208.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302582433|gb|ADL56444.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gallionella capsiferriformans ES-2] Length = 107 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVV+ENCI CK TDCV+VCPVDCF EG NFL I PDECIDC +C ECP +AI + D Sbjct: 1 MTYVVSENCIKCKFTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + +N+E + W I KK+ A + GVK K Sbjct: 61 LPADQTHFTALNAELSKLWGVIVEKKDPPADAEEWQGVKDKL 102 >gi|332532550|ref|ZP_08408427.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas haloplanktis ANT/505] gi|332037971|gb|EGI74419.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas haloplanktis ANT/505] Length = 107 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECSADAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A WP IT K + A +G+ K + Sbjct: 61 LPESQKEFTELNAELALVWPRITEVKPAPEDADVWNGIDDKLK 103 >gi|307069599|ref|YP_003878076.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Zinderia insecticola CARI] gi|306482859|gb|ADM89730.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Zinderia insecticola CARI] Length = 110 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 2/86 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT++VTE+CI CK+TDCVEVCPV+CF+EG NFL I+P+ECIDCGVC ECP AI + D Sbjct: 1 MTHIVTESCIECKYTDCVEVCPVNCFHEGPNFLVINPEECIDCGVCVSECPAKAIYLEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKK 84 + + KIN E + +WP I K Sbjct: 61 LPKNQKQFSKINLELSKKWPIINNSK 86 >gi|17549028|ref|NP_522368.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17431279|emb|CAD17958.1| probable ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 112 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDTCIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|83815572|ref|YP_444389.1| ferredoxin [Salinibacter ruber DSM 13855] gi|83756966|gb|ABC45079.1| ferredoxin [Salinibacter ruber DSM 13855] Length = 148 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 66/111 (59%), Gaps = 6/111 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI P+ + Sbjct: 35 MPYVVAEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPEDQ 94 Query: 61 --PGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEKYFS 105 E + + N A QW N+T K L A + ++ E + Sbjct: 95 LPEEWEHYTQWNEYLANQWRDLGYNVTEKTGPLDDAEAWEDAEKSEEDILT 145 >gi|294506132|ref|YP_003570190.1| Ferredoxin [Salinibacter ruber M8] gi|294342460|emb|CBH23238.1| Ferredoxin [Salinibacter ruber M8] Length = 141 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 66/111 (59%), Gaps = 6/111 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI P+ + Sbjct: 28 MPYVVAEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPEDQ 87 Query: 61 --PGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEKYFS 105 E + + N A QW N+T K L A + ++ E + Sbjct: 88 LPEEWEHYTQWNEYLANQWRDLGYNVTEKTGPLDDAEAWEDAEKSEEDILT 138 >gi|83816596|ref|YP_445271.1| ferredoxin-1 [Salinibacter ruber DSM 13855] gi|294507140|ref|YP_003571198.1| Ferredoxin-1 [Salinibacter ruber M8] gi|83757990|gb|ABC46103.1| ferredoxin-1 [Salinibacter ruber DSM 13855] gi|294343468|emb|CBH24246.1| Ferredoxin-1 [Salinibacter ruber M8] Length = 114 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/93 (58%), Positives = 62/93 (66%), Gaps = 6/93 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI PD + Sbjct: 1 MPYVVTEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPDDQ 60 Query: 61 --PGLELWLKINSEYATQWP----NITTKKESL 87 E +++ N + QW N+T K L Sbjct: 61 LPEEYEHYIQWNEYLSNQWRELGYNVTEKTGPL 93 >gi|299069168|emb|CBJ40421.1| Ferredoxin 1 [Ralstonia solanacearum CMR15] Length = 112 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 1 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDTCIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|134095508|ref|YP_001100583.1| ferredoxin [Herminiimonas arsenicoxydans] gi|133739411|emb|CAL62461.1| Ferredoxin 1 [Herminiimonas arsenicoxydans] Length = 116 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/96 (53%), Positives = 62/96 (64%), Gaps = 4/96 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV VCP+DCF EG NFL I+PDECIDC +C ECPV AI D E Sbjct: 1 MTFVVTEPCIQCKYTDCVTVCPMDCFMEGPNFLVINPDECIDCSMCVAECPVGAIVGDRE 60 Query: 61 PGLEL--WLKINSEYATQ--WPNITTKKESLPSAAK 92 + +L++N + W IT K +LP K Sbjct: 61 LAADQAHFLELNRSLSAHPDWQRITMSKPALPEHEK 96 >gi|323496163|ref|ZP_08101221.1| ferredoxin [Vibrio sinaloensis DSM 21326] gi|323318440|gb|EGA71393.1| ferredoxin [Vibrio sinaloensis DSM 21326] Length = 107 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 VPADQKIYIELNAELAEHWPVQTEVKPAMDEAEKWNGVADK 101 >gi|152982480|ref|YP_001354084.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282557|gb|ABR90967.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 114 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 3/114 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M Y+VTE CI CK DC+EVCP F+ GENF+ I+PD C++CG+CE CP AIK D Sbjct: 1 MAYIVTEACIRCKFMDCIEVCPTYAFHAGENFVVINPDTCVNCGLCEMVCPTQAIKAKGD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE-KYFSPNPGGK 111 +++++N+ A WP IT K A GV K E ++P+P K Sbjct: 61 ATEKELVFVELNARLAKNWPAITQKGMVPADAGNWIGVSDKKEFLLYTPDPAAK 114 >gi|56478031|ref|YP_159620.1| ferredoxin [Aromatoleum aromaticum EbN1] gi|56314074|emb|CAI08719.1| ferredoxin [Aromatoleum aromaticum EbN1] Length = 107 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CKHTDCV+VCP D F EG NFL I P+ECIDC +C ECPVDAI D + Sbjct: 1 MTYVVTEACIKCKHTDCVDVCPTDAFREGPNFLVIDPEECIDCTLCVAECPVDAIYADDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E A +W I K + A VK K + Sbjct: 61 VPDDQRQFIALNEELAKEWKPIVEVKPAPEDAGMWATVKDKLK 103 >gi|262197809|ref|YP_003269018.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] gi|262081156|gb|ACY17125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] Length = 131 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 70/133 (52%), Gaps = 26/133 (19%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M Y+V + C+ CK+TDCV VCPVDCFYEG+NFL IHPDECIDCG CEPECP AI + D Sbjct: 1 MPYIVADPCVKCKYTDCVAVCPVDCFYEGKNFLVIHPDECIDCGACEPECPTTAIFEEGD 60 Query: 59 TEPGLELWLKINSEY---------------------ATQWPNITTKKESLPSAAKMDGVK 97 + IN+ + A WPNIT + L A D K Sbjct: 61 LPEKWNAYKTINAVFSGAEEMGDVDTEGWPEQLKASAQVWPNITEQGSPLDGA---DDAK 117 Query: 98 QKYEKYFSPNPGG 110 + K + +P G Sbjct: 118 DEENKIAALSPEG 130 >gi|254456143|ref|ZP_05069572.1| ferredoxin [Candidatus Pelagibacter sp. HTCC7211] gi|207083145|gb|EDZ60571.1| ferredoxin [Candidatus Pelagibacter sp. HTCC7211] Length = 77 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/76 (60%), Positives = 53/76 (69%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L I PDECIDCGVCEPECPVDAI DTEPG E WL+IN++Y+ WPNI+ KK+ Sbjct: 1 MLVIKPDECIDCGVCEPECPVDAITADTEPGSEKWLEINTKYSEIWPNISEKKDPPTDHE 60 Query: 92 KMDGVKQKYEKYFSPN 107 K + KYEKYF N Sbjct: 61 KFKDEQNKYEKYFKEN 76 >gi|86145740|ref|ZP_01064069.1| ferredoxin [Vibrio sp. MED222] gi|218676912|ref|YP_002395731.1| Ferredoxin [Vibrio splendidus LGP32] gi|85836439|gb|EAQ54568.1| ferredoxin [Vibrio sp. MED222] gi|218325180|emb|CAV27087.1| Ferredoxin [Vibrio splendidus LGP32] Length = 107 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV +NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + D Sbjct: 1 MAFVVGDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K + A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKAPMDEAEKWNGVADKL 102 >gi|283780774|ref|YP_003371529.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283439227|gb|ADB17669.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 92 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV + C CK+TDCV VCPV+CFYEGE L IHPDECIDC C PECPV+AI + + Sbjct: 1 MAHVVCQPCFGCKYTDCVVVCPVECFYEGEQILYIHPDECIDCEACVPECPVEAIFHQDN 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESL 87 + ++++N+E A Q P+IT KKE L Sbjct: 61 VPEDQKPFIELNAEMAPQSPSITEKKEPL 89 >gi|84385231|ref|ZP_00988263.1| ferredoxin [Vibrio splendidus 12B01] gi|84379828|gb|EAP96679.1| ferredoxin [Vibrio splendidus 12B01] Length = 107 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV +NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVGDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K + A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKAPMDEAEKWNGVSDKL 102 >gi|194288740|ref|YP_002004647.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193222575|emb|CAQ68578.1| putative FERREDOXIN [Cupriavidus taiwanensis LMG 19424] Length = 109 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 4/99 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI + D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDG 95 +L +N+E + + W +T K LP + G Sbjct: 61 LPEDQRHFLALNAELSRRPDWLPLTQAKGPLPDHEQWAG 99 >gi|323494050|ref|ZP_08099166.1| ferredoxin [Vibrio brasiliensis LMG 20546] gi|323311677|gb|EGA64825.1| ferredoxin [Vibrio brasiliensis LMG 20546] Length = 107 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++++N+E A WP T K ++ A K +GV K + Sbjct: 61 VPDDQTIYIQLNAELAELWPVQTEVKPAMDEAEKWNGVPNKLD 103 >gi|149916919|ref|ZP_01905420.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] gi|149822197|gb|EDM81588.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] Length = 102 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT NC C+ TDCV VCPV+CF+ + L I PDECIDCG C PECPV+AI +TE Sbjct: 1 MTFVVTSNCQRCRFTDCVAVCPVECFHGDKEMLYIDPDECIDCGACVPECPVEAIYDETE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSA 90 P W++IN+ A++ P + + LP+A Sbjct: 61 VPPEQIEWIEINAARASELPVVAETETPLPTA 92 >gi|254505412|ref|ZP_05117559.1| ferredoxin [Vibrio parahaemolyticus 16] gi|219551529|gb|EED28507.1| ferredoxin [Vibrio parahaemolyticus 16] Length = 107 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 VPEDQKIYVELNAELAELWPVQTEVKPAMDEAEKWNGVPDK 101 >gi|300311230|ref|YP_003775322.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] gi|300074015|gb|ADJ63414.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 112 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 63/111 (56%), Gaps = 4/111 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVT++CI CK+TDCV VCP+DCF EG NFL I PD CIDC +C PECPV AI D Sbjct: 1 MPFVVTDSCIQCKYTDCVSVCPMDCFVEGPNFLVIDPDGCIDCSMCVPECPVGAIYNATD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L + ++N+ + Q W IT K LP K V K P Sbjct: 61 LPATLAHFEQLNARLSRQPGWKPITQAKPPLPGHEKWKDVADKLPLLEQPQ 111 >gi|163803681|ref|ZP_02197543.1| ferredoxin [Vibrio sp. AND4] gi|159172520|gb|EDP57383.1| ferredoxin [Vibrio sp. AND4] Length = 107 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + D Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 60 EPGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P + L+ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPDDQVLYKELNAELAEIWPVQTEIKPAMDEAEKWNGVPNKLD 103 >gi|283780772|ref|YP_003371527.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283439225|gb|ADB17667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 90 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MT+VV + C CKHTDCV VCP DCF+EG+ L I PD CIDC C ECPV+AI D Sbjct: 1 MTHVVCKACFGCKHTDCVVVCPCDCFHEGDQMLYIDPDACIDCCACSSECPVEAIFIDDA 60 Query: 60 EPGLEL-WLKINSEYATQWPNITTKKESL 87 P +L ++++N+E TQ P+IT KK+ L Sbjct: 61 VPADQLAFIQLNAEMVTQTPSITQKKKPL 89 >gi|88608216|ref|YP_506219.1| ferredoxin [Neorickettsia sennetsu str. Miyayama] gi|88600385|gb|ABD45853.1| ferredoxin [Neorickettsia sennetsu str. Miyayama] Length = 139 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 23/122 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M +VVTE C+ CK+TDCVEVCPVDCF+E +L I PD CIDCGVC PECP++AI D Sbjct: 1 MPHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDET 60 Query: 59 -------------------TEPGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 T+ L+ L N E A + P I TKK+ L A K V Sbjct: 61 YIDGKSLGEIISVSDASLLTKKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVP 120 Query: 98 QK 99 K Sbjct: 121 NK 122 >gi|28897729|ref|NP_797334.1| ferredoxin [Vibrio parahaemolyticus RIMD 2210633] gi|153838666|ref|ZP_01991333.1| ferredoxin-1 [Vibrio parahaemolyticus AQ3810] gi|260363840|ref|ZP_05776595.1| ferredoxin-1 [Vibrio parahaemolyticus K5030] gi|260876900|ref|ZP_05889255.1| ferredoxin-1 [Vibrio parahaemolyticus AN-5034] gi|260897958|ref|ZP_05906454.1| ferredoxin-1 [Vibrio parahaemolyticus Peru-466] gi|260902160|ref|ZP_05910555.1| ferredoxin-1 [Vibrio parahaemolyticus AQ4037] gi|28805942|dbj|BAC59218.1| ferredoxin [Vibrio parahaemolyticus RIMD 2210633] gi|149747944|gb|EDM58810.1| ferredoxin-1 [Vibrio parahaemolyticus AQ3810] gi|308085488|gb|EFO35183.1| ferredoxin-1 [Vibrio parahaemolyticus Peru-466] gi|308093644|gb|EFO43339.1| ferredoxin-1 [Vibrio parahaemolyticus AN-5034] gi|308108295|gb|EFO45835.1| ferredoxin-1 [Vibrio parahaemolyticus AQ4037] gi|308113880|gb|EFO51420.1| ferredoxin-1 [Vibrio parahaemolyticus K5030] Length = 107 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQTIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLD 103 >gi|27367705|ref|NP_763232.1| ferredoxin [Vibrio vulnificus CMCP6] gi|37675831|ref|NP_936227.1| ferredoxin [Vibrio vulnificus YJ016] gi|320157989|ref|YP_004190367.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Vibrio vulnificus MO6-24/O] gi|27359277|gb|AAO08222.1|AE016812_204 Ferredoxin [Vibrio vulnificus CMCP6] gi|37200370|dbj|BAC96197.1| ferredoxin [Vibrio vulnificus YJ016] gi|319933301|gb|ADV88164.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Vibrio vulnificus MO6-24/O] Length = 107 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQVIYKELNAELAELWPVQTEVKPAMDEAEKWNGVPNKLD 103 >gi|328473289|gb|EGF44137.1| ferredoxin [Vibrio parahaemolyticus 10329] Length = 107 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + D Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 60 EPGLELWLK-INSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P ++ K +N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQIIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLD 103 >gi|148973892|ref|ZP_01811425.1| ferredoxin [Vibrionales bacterium SWAT-3] gi|145965589|gb|EDK30837.1| ferredoxin [Vibrionales bacterium SWAT-3] Length = 107 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV +NCI CK+TD V VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVGDNCIQCKYTDFVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKPAMDDAEKWNGVPDKL 102 >gi|153834717|ref|ZP_01987384.1| ferredoxin-1 [Vibrio harveyi HY01] gi|156973800|ref|YP_001444707.1| ferredoxin [Vibrio harveyi ATCC BAA-1116] gi|148868856|gb|EDL67920.1| ferredoxin-1 [Vibrio harveyi HY01] gi|156525394|gb|ABU70480.1| hypothetical protein VIBHAR_01510 [Vibrio harveyi ATCC BAA-1116] Length = 107 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQVIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLD 103 >gi|73540321|ref|YP_294841.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117734|gb|AAZ59997.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 109 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 2/96 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI + D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 ++ IN+E A + + +K P + D Sbjct: 61 LPEDQRHFVAINAELARRPDWLPLRKAKGPLSDHAD 96 >gi|113866665|ref|YP_725154.1| ferredoxin [Ralstonia eutropha H16] gi|113525441|emb|CAJ91786.1| Ferredoxin [Ralstonia eutropha H16] Length = 109 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 4/99 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI + D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDG 95 ++ +N+E + + W + K +P + G Sbjct: 61 LPEDQRHFIALNAELSRRADWLPLLKAKGPIPGHEQWAG 99 >gi|320103065|ref|YP_004178656.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Isosphaera pallida ATCC 43644] gi|319750347|gb|ADV62107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Isosphaera pallida ATCC 43644] Length = 98 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VVT C CK+TDCV VCPV+CFYEGE L IHPDECIDC C PECPV+AI D Sbjct: 1 MAHVVTAPCFECKYTDCVVVCPVECFYEGEQMLYIHPDECIDCEACVPECPVEAIFHEDN 60 Query: 60 EPG-LELWLKINSEYATQWPNITTKKESLPSAA 91 P + ++ +N+E A P IT K + A Sbjct: 61 VPADYKEFIALNAEKAPHLPVITQSKTPMEGPA 93 >gi|296122862|ref|YP_003630640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296015202|gb|ADG68441.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 94 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 60/89 (67%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MT+VV E C CK+TDCV VCPV+CF EGE+ L IHP+ECIDC C PECP AI D Sbjct: 1 MTHVVAEPCFNCKYTDCVVVCPVECFKEGESMLFIHPEECIDCEACVPECPPQAIFHEDN 60 Query: 60 EPGLEL-WLKINSEYATQWPNITTKKESL 87 P +LK+N+E + Q P IT KKE L Sbjct: 61 LPAQWADYLKLNAEMSEQCPPITEKKEPL 89 >gi|238563896|ref|ZP_04610789.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|238519725|gb|EEP83193.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] Length = 76 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI + + Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 61 -PG-LELWLKINSEYA 74 PG + + +N+E A Sbjct: 61 VPGDQQHFTALNAELA 76 >gi|254796711|ref|YP_003081547.1| ferredoxin [Neorickettsia risticii str. Illinois] gi|254589951|gb|ACT69313.1| ferredoxin [Neorickettsia risticii str. Illinois] Length = 139 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 24/135 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M +VVTE C+ CK+TDCVEVCPVDCF+E +L I PD CIDCGVC PECP++AI D Sbjct: 1 MPHVVTEKCLKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIINDET 60 Query: 59 -------------------TEPGLELWLKI--NSEYATQWPNITTKKESLPSAAKMDGVK 97 T+ L+ + N E A + P I KK+ L A K V Sbjct: 61 YIDGKSLEEIISVSDTSLLTKKQLDARFMVVFNRERAAELPLIVMKKDPLDGAEKWAEVP 120 Query: 98 QKYEKYFSPNPGGKN 112 K +Y +N Sbjct: 121 NKI-RYIKQTESKEN 134 >gi|167563248|ref|ZP_02356164.1| ferredoxin [Burkholderia oklahomensis EO147] Length = 95 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLKINSEYAT 75 + VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ D ++ +N+E A Sbjct: 1 MAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAADDLPDDQTHFVALNAELAR 60 Query: 76 Q--WPNITTKKESLPSAAKMDGVKQKYEKY 103 WP IT KK +LP A VK K ++ Sbjct: 61 HPSWPRITGKKSALPDHATWTDVKGKLDQL 90 >gi|325110113|ref|YP_004271181.1| ferredoxin [Planctomyces brasiliensis DSM 5305] gi|324970381|gb|ADY61159.1| ferredoxin [Planctomyces brasiliensis DSM 5305] Length = 92 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +VV + C CK+TDCV VCPV+CFYEG+ L IHPDECIDC C PECPV+AI D Sbjct: 1 MPHVVCQPCFNCKYTDCVVVCPVECFYEGDKMLYIHPDECIDCEACVPECPVEAIFHEDN 60 Query: 60 EPG-LELWLKINSEYATQWPNITTKKESL 87 P + +++IN+E + P IT KKE L Sbjct: 61 VPDEWKEYVEINAEKSADTPVITEKKEPL 89 >gi|254514874|ref|ZP_05126935.1| RecA DNA recombination protein [gamma proteobacterium NOR5-3] gi|219677117|gb|EED33482.1| RecA DNA recombination protein [gamma proteobacterium NOR5-3] Length = 90 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 2/80 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 +EVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E +++L++N+E A Sbjct: 1 MEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDELPADQQVFLELNAELAE 60 Query: 76 QWPNITTKKESLPSAAKMDG 95 WP IT K + A + G Sbjct: 61 VWPCITEMKPAPEDAEEWAG 80 >gi|300692275|ref|YP_003753270.1| ferredoxin II (FdII) [Ralstonia solanacearum PSI07] gi|299079335|emb|CBJ52007.1| Ferredoxin II (FdII) [Ralstonia solanacearum PSI07] Length = 103 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVVT+ C C++T+CV VCPV CF+ + I PD CIDCG C P CPV AI D Sbjct: 1 MTYVVTDLCTGCRYTECVTVCPVACFHLDDQMTYIDPDNCIDCGGCAPACPVGAIVADYL 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 WL IN E A Q P IT+K LP A + Sbjct: 61 LPADKAAWLGINRERAAQTPVITSKLPPLPGAPDL 95 >gi|146337764|ref|YP_001202812.1| ferredoxin II (fragment) [Bradyrhizobium sp. ORS278] gi|146190570|emb|CAL74572.1| ferredoxin II (fragment) [Bradyrhizobium sp. ORS278] Length = 68 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/65 (63%), Positives = 47/65 (72%) Query: 45 VCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 +CEPECP DAIKPDTEPGLE WL +N+EYA WPNIT KK+ A + DG K+EKYF Sbjct: 1 MCEPECPADAIKPDTEPGLEKWLGVNAEYAKSWPNITQKKDPPGDAKEHDGEDGKFEKYF 60 Query: 105 SPNPG 109 S G Sbjct: 61 SSKAG 65 >gi|289675307|ref|ZP_06496197.1| ferredoxin I [Pseudomonas syringae pv. syringae FF5] Length = 48 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 40/48 (83%), Positives = 44/48 (91%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP 48 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEP Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEP 48 >gi|86750526|ref|YP_487022.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86573554|gb|ABD08111.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 101 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NC C++T+CV VCPV+CF+ I P+ CIDCG C P CPV AI PD Sbjct: 1 MTYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYR 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSA 90 + W+ +N + A + P +T + LP A Sbjct: 61 LPAHQKFWIDVNRKRAAETPVLTARLPPLPGA 92 >gi|167570432|ref|ZP_02363306.1| ferredoxin [Burkholderia oklahomensis C6786] Length = 93 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 4/88 (4%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLKINSEYATQ- 76 +CPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ D ++ +N+E A Sbjct: 1 MCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAADDLPDDQTHFVALNAELARHP 60 Query: 77 -WPNITTKKESLPSAAKMDGVKQKYEKY 103 WP IT KK +LP A VK K ++ Sbjct: 61 SWPRITGKKSALPDHATWTDVKGKLDQL 88 >gi|254184178|ref|ZP_04890768.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|184214709|gb|EDU11752.1| putative ferredoxin [Burkholderia pseudomallei 1655] Length = 70 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/55 (76%), Positives = 46/55 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAI 55 >gi|226939570|ref|YP_002794643.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] gi|226714496|gb|ACO73634.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] Length = 112 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MT+VVTE CI CK+TDCVEVCPVDCF EG NFL I P ECIDC +C ECPV AI D Sbjct: 1 MTHVVTEACIRCKYTDCVEVCPVDCFREGPNFLVIDPRECIDCVLCVAECPVGAIYADDD 60 Query: 59 TEPGLELWLKINSEYAT--QWPNITTKK 84 P + ++ +N+E A +W IT + Sbjct: 61 VPPDQQDFIALNAELAAHPEWRPITMAR 88 >gi|163839921|ref|YP_001624327.1| N-succinyldiaminopimelate aminotransferase [Renibacterium salmoninarum ATCC 33209] gi|162953397|gb|ABY22912.1| ferredoxin [Renibacterium salmoninarum ATCC 33209] Length = 539 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +TYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 41 VTYVIAQPCVDIKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 95 >gi|304309916|ref|YP_003809514.1| Ferrodoxin [gamma proteobacterium HdN1] gi|301795649|emb|CBL43848.1| Ferrodoxin [gamma proteobacterium HdN1] Length = 108 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV +NCI CK+T C EVCPV+ F+EG NFL I P+ CIDC +C P C +I + D Sbjct: 1 MAHVVLDNCINCKYTYCAEVCPVEAFHEGPNFLVIDPEACIDCMLCVPACITGSIMEERD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++ N+ + QWP+I +K + P A + D V K Sbjct: 61 VPHSQRSMVRANAMLSQQWPSIIERKPAFPDAEEWDKVPGK 101 >gi|32474247|ref|NP_867241.1| ferredoxin [Rhodopirellula baltica SH 1] gi|32444785|emb|CAD74787.1| ferredoxin [Rhodopirellula baltica SH 1] Length = 91 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 2/87 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDTEP 61 +VV E C CK+TDCV VCPV+CFYEGE L IHP+ECIDC C PECPV+AI D P Sbjct: 2 HVVAEPCSGCKYTDCVVVCPVECFYEGEQMLYIHPEECIDCEACVPECPVEAIFHEDNLP 61 Query: 62 -GLELWLKINSEYATQWPNITTKKESL 87 + ++++N+E + + IT KKE L Sbjct: 62 EEWQSYIELNAEMSEKTEVITEKKEPL 88 >gi|317125122|ref|YP_004099234.1| ferredoxin FdxA [Intrasporangium calvum DSM 43043] gi|315589210|gb|ADU48507.1| putative ferredoxin FdxA [Intrasporangium calvum DSM 43043] Length = 118 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ CI K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIGSPCIDVKDRACVEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 P LE +L+ N+++ Sbjct: 61 LPPDLEPYLQDNADF 75 >gi|207743547|ref|YP_002259939.1| ferredoxin protein [Ralstonia solanacearum IPO1609] gi|206594945|emb|CAQ61872.1| ferredoxin protein [Ralstonia solanacearum IPO1609] Length = 91 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D + W+ IN+E A Sbjct: 1 MDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINAELAQ 60 Query: 76 Q-WPNITTKKESLPSAAKMDGVKQKYEKYF 104 WP+IT K LP A + VK K E+Y Sbjct: 61 AGWPSITKTKSPLPEADQWKDVKDK-EQYL 89 >gi|328887086|emb|CCA60325.1| Ferredoxin [Streptomyces venezuelae ATCC 10712] Length = 97 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+TDCV+VCPV CF+EG L I+P+ECIDC C ECP +AI D + Sbjct: 1 MAYVVTDECIGCKYTDCVDVCPVSCFHEGPEMLYINPEECIDCNACVAECPPEAIWADVD 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKK 84 P +L W++IN E + ++P + + Sbjct: 61 LPEDKLQWIEINGEMSAKYPVLHESR 86 >gi|269961009|ref|ZP_06175378.1| Ferredoxin [Vibrio harveyi 1DA3] gi|269834228|gb|EEZ88318.1| Ferredoxin [Vibrio harveyi 1DA3] Length = 104 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 2/86 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKK 84 ++ ++N+E A WP T K Sbjct: 61 LPEDQVIYKELNAELAEIWPVQTEVK 86 >gi|326331682|ref|ZP_08197970.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] gi|325950481|gb|EGD42533.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] Length = 536 Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 44/68 (64%), Gaps = 10/68 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTYV+T++C C CVEVCPVDC + G + L IHPDECIDCG CE CPV Sbjct: 1 MTYVITQSC--CNDASCVEVCPVDCIHPGPDEPGFGAAEMLYIHPDECIDCGACEDACPV 58 Query: 53 DAIKPDTE 60 +AI PD E Sbjct: 59 NAIFPDYE 66 >gi|188575948|ref|YP_001912877.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520400|gb|ACD58345.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] Length = 85 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 2/80 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLKINSEYATQWPNI 80 +DCF+ G NFL I PDECIDC +CEPECP +AI P D G E ++ +N+E A WP + Sbjct: 1 MDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDDVPAGQEGFVALNAELAKVWPVL 60 Query: 81 TTKKESLPSAAKMDGVKQKY 100 T ++E LP AA+ DG K Sbjct: 61 TVRQEPLPDAAEWDGKPNKL 80 >gi|226228428|ref|YP_002762534.1| ferredoxin [Gemmatimonas aurantiaca T-27] gi|226091619|dbj|BAH40064.1| ferredoxin [Gemmatimonas aurantiaca T-27] Length = 87 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 42/69 (60%), Positives = 49/69 (71%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+TE CI K CV+VCPVDC YEGE+ L I+PDECIDCG CEPECPV AI P+ + Sbjct: 1 MPYVITEACISVKDRSCVDVCPVDCIYEGEDQLYINPDECIDCGACEPECPVTAIFPEED 60 Query: 61 PGLELWLKI 69 +L I Sbjct: 61 VPTQLRSFI 69 >gi|41408137|ref|NP_960973.1| FdxC_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396492|gb|AAS04356.1| FdxC_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 108 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + D Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQW 77 P +L+IN+++ T+ Sbjct: 61 LPPEHSQYLQINADFFTEL 79 >gi|118462886|ref|YP_881360.1| ferredoxin [Mycobacterium avium 104] gi|254774861|ref|ZP_05216377.1| ferredoxin [Mycobacterium avium subsp. avium ATCC 25291] gi|118164173|gb|ABK65070.1| ferredoxin [Mycobacterium avium 104] Length = 108 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + D Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQW 77 P +L+IN+++ T+ Sbjct: 61 LPPEHSQYLQINADFFTEL 79 >gi|299067165|emb|CBJ38361.1| Ferredoxin (fdxA) [Ralstonia solanacearum CMR15] Length = 91 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC ECPV+AI + D + W+ IN++ A Sbjct: 1 MDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINADLAQ 60 Query: 76 Q-WPNITTKKESLPSAAKMDGVKQKYEKYF 104 WP+IT K LP A + VK K E+Y Sbjct: 61 AGWPSITKTKTPLPDAEEWKDVKDK-EQYL 89 >gi|170726752|ref|YP_001760778.1| molydopterin dinucleotide-binding region [Shewanella woodyi ATCC 51908] gi|169812099|gb|ACA86683.1| molydopterin dinucleotide-binding region [Shewanella woodyi ATCC 51908] Length = 1299 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT CI KHT CV+VCPV+ F EGE L I PDECI C C ECP AI P+ Sbjct: 1 MAYVVTGACIGDKHTSCVDVCPVNAFREGEEMLYIDPDECISCNACLTECPSLAIFPEAS 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESLP 88 P +L ++ IN+ + + P IT + P Sbjct: 61 VPEDQLQYININAIESKKHPVITERINKQP 90 >gi|330813498|ref|YP_004357737.1| ferredoxin [Candidatus Pelagibacter sp. IMCC9063] gi|327486593|gb|AEA80998.1| ferredoxin [Candidatus Pelagibacter sp. IMCC9063] Length = 83 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 51/78 (65%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L I+PDECIDCGVCEPECP+ AI+PDT G E + +N + + WP IT KK+ LP Sbjct: 1 MLVINPDECIDCGVCEPECPIGAIEPDTNDGAEKLVLLNKKLSETWPVITKKKDPLPDWE 60 Query: 92 KMDGVKQKYEKYFSPNPG 109 K ++ K +KY+S G Sbjct: 61 KFKDMENKLDKYYSEKAG 78 >gi|291191900|gb|ADD83007.1| PtnO9 [Streptomyces platensis] Length = 111 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ KH C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDLKHKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|108805583|ref|YP_645520.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108766826|gb|ABG05708.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 79 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/60 (65%), Positives = 45/60 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+TE CI K CVEVCPVDC Y+G I+P+ECIDCG CEPECPV+AI P+ E Sbjct: 1 MTYVITEPCIGTKDQSCVEVCPVDCIYDGGEHFMINPEECIDCGACEPECPVEAIYPEDE 60 >gi|222102890|ref|YP_002539929.1| ferredoxin [Agrobacterium vitis S4] gi|221739491|gb|ACM40224.1| ferredoxin [Agrobacterium vitis S4] Length = 101 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVVT+ C C++T+CV VCPV+CF+ E I PD CIDCG C P CPV AI Sbjct: 1 MTYVVTDQCSGCRYTECVTVCPVECFHIDEEMTYIDPDNCIDCGGCAPVCPVGAIHASYL 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + W++IN A + P + ++ LP A Sbjct: 61 LPADKQEWIEINRRRAAETPVVASRLPPLPGA 92 >gi|91774917|ref|YP_544673.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91708904|gb|ABE48832.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 101 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT VVT+NC+ C+ T+CV CPV F G L I + CIDCG C P+CPV AI D + Sbjct: 1 MTTVVTDNCLKCRFTECVTSCPVSAFRAGPEMLYIDSETCIDCGACVPKCPVQAIYEDLD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSA 90 ++ W+ IN+ A WP IT K L A Sbjct: 61 LPEDMLQWIDINASEAKLWPKITAKDVPLEGA 92 >gi|93006115|ref|YP_580552.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92393793|gb|ABE75068.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 67 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 47/61 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +++ +NCI CK+TDCV VC VD F+EG NFLAI P+ CIDC +C+PEC +AI P ++ Sbjct: 5 IAFIIGDNCIKCKYTDCVAVCLVDAFFEGLNFLAIDPNSCIDCSLCDPECSANAITPVSK 64 Query: 61 P 61 P Sbjct: 65 P 65 >gi|121610433|ref|YP_998240.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121555073|gb|ABM59222.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 113 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 41/75 (54%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T CI K CV+ CPVDC Y G L IHPDECIDCGVCEP CP AI D Sbjct: 1 MAYVITTGCIDVKDGACVQCCPVDCIYTGGRTLYIHPDECIDCGVCEPACPTQAIYEDHR 60 Query: 61 --PGLELWLKINSEY 73 L +L IN E+ Sbjct: 61 LPAPLRPFLAINREF 75 >gi|189913023|ref|YP_001964912.1| Conserved ferredoxin oxidoreductase-like hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|189913352|ref|YP_001964581.1| Ferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167777699|gb|ABZ95999.1| Conserved ferredoxin oxidoreductase-like hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781420|gb|ABZ99717.1| Ferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 99 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 2/99 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE C+ CK+T C VCPV+ F+E + L I PD CIDC C+ ECP+DAI PD + Sbjct: 1 MAYVVTEICVDCKYTSCAAVCPVEAFHEAPDTLYIDPDTCIDCNACQYECPIDAIFPDYD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + +++N++ A ++P I T K L A D K Sbjct: 61 VPEKHKPSIEVNAKEANKFPVIVTTKPPLKGAKCSDPSK 99 >gi|302536699|ref|ZP_07289041.1| ferredoxin [Streptomyces sp. C] gi|302445594|gb|EFL17410.1| ferredoxin [Streptomyces sp. C] Length = 110 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 T + + K N E+ + + P A G+ ++ + + P N Sbjct: 61 TPEEWKDYYKANVEFFDELGS--------PGGASKLGLIERDHPFVAALPADINA 107 >gi|254818693|ref|ZP_05223694.1| FdxC_1 [Mycobacterium intracellulare ATCC 13950] Length = 108 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 8/82 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----- 55 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIFYEDD 60 Query: 56 KPDTEPGLELWLKINSEYATQW 77 PD G +L+IN+++ + Sbjct: 61 LPDEHSG---YLQINADFFAEL 79 >gi|282854408|ref|ZP_06263745.1| putative ferredoxin [Propionibacterium acnes J139] gi|282583861|gb|EFB89241.1| putative ferredoxin [Propionibacterium acnes J139] gi|328906846|gb|EGG26612.1| putative ferredoxin [Propionibacterium sp. P08] Length = 106 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNEL 79 >gi|50842114|ref|YP_055341.1| ferredoxin [Propionibacterium acnes KPA171202] gi|289425779|ref|ZP_06427533.1| putative ferredoxin [Propionibacterium acnes SK187] gi|289426708|ref|ZP_06428436.1| putative ferredoxin [Propionibacterium acnes J165] gi|295130202|ref|YP_003580865.1| ferredoxin family protein [Propionibacterium acnes SK137] gi|50839716|gb|AAT82383.1| ferredoxin [Propionibacterium acnes KPA171202] gi|289153722|gb|EFD02429.1| putative ferredoxin [Propionibacterium acnes SK187] gi|289160034|gb|EFD08210.1| putative ferredoxin [Propionibacterium acnes J165] gi|291377123|gb|ADE00978.1| ferredoxin family protein [Propionibacterium acnes SK137] gi|313802321|gb|EFS43547.1| putative ferredoxin [Propionibacterium acnes HL110PA2] gi|313828097|gb|EFS65811.1| putative ferredoxin [Propionibacterium acnes HL063PA2] gi|313839087|gb|EFS76801.1| putative ferredoxin [Propionibacterium acnes HL086PA1] gi|314962320|gb|EFT06421.1| putative ferredoxin [Propionibacterium acnes HL082PA1] gi|315077406|gb|EFT49466.1| putative ferredoxin [Propionibacterium acnes HL053PA2] gi|327455186|gb|EGF01841.1| putative ferredoxin [Propionibacterium acnes HL092PA1] gi|332675037|gb|AEE71853.1| ferredoxin [Propionibacterium acnes 266] Length = 106 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNEL 79 >gi|296166244|ref|ZP_06848683.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898428|gb|EFG77995.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 108 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 7/99 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV++I + D Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQW--PNITTK---KESLPSAAK 92 + + N+++ + P +K E+ P+A K Sbjct: 61 LPAEYSQYTQFNADFFAELGSPGGASKVGLTENDPAAVK 99 >gi|145222758|ref|YP_001133436.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145215244|gb|ABP44648.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 107 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ T+ Sbjct: 61 VPEQWSAYTQINADFFTE 78 >gi|120405481|ref|YP_955310.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958299|gb|ABM15304.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 107 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPDQWSAYTQINADFFVE 78 >gi|184200470|ref|YP_001854677.1| ferredoxin [Kocuria rhizophila DC2201] gi|183580700|dbj|BAG29171.1| 7Fe ferredoxin [Kocuria rhizophila DC2201] Length = 107 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACVEECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPEEWAEYYKANVEF 75 >gi|314925701|gb|EFS89532.1| putative ferredoxin [Propionibacterium acnes HL036PA3] Length = 106 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+A+ D Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAVYYEDD 60 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNEL 79 >gi|258593114|emb|CBE69425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein (modular protein) [NC10 bacterium 'Dutch sediment'] Length = 113 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/55 (67%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YVV + CI K CV+VCPV+CFYEGE L IHP+ECIDC CEPECPV AI Sbjct: 1 MAYVVADPCIGTKDHACVDVCPVECFYEGEELLFIHPEECIDCAACEPECPVAAI 55 >gi|296170897|ref|ZP_06852434.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894446|gb|EFG74190.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 118 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + CI CV+ CPVDC YEG L IHPDEC+DCG CEP CPVDAI + D Sbjct: 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVDAIYYEDD 60 Query: 59 TEPGLELWLKINSE-YATQWPNITTKKESLPSAAKM 93 L +L N+ +A P S AAKM Sbjct: 61 LPDELNPYLADNAAFFAETLPGRDAPLGSPGGAAKM 96 >gi|311898212|dbj|BAJ30620.1| putative 7Fe ferredoxin [Kitasatospora setae KM-6054] Length = 108 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|309813204|ref|ZP_07706925.1| ferredoxin [Dermacoccus sp. Ellin185] gi|308432800|gb|EFP56711.1| ferredoxin [Dermacoccus sp. Ellin185] Length = 107 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 9/102 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 T + K N E+ S AAKM +K+ + Sbjct: 61 TPEEWADYYKANVEFFDDL-------GSPGGAAKMGVIKKDH 95 >gi|329939592|ref|ZP_08288893.1| ferredoxin [Streptomyces griseoaurantiacus M045] gi|329301162|gb|EGG45057.1| ferredoxin [Streptomyces griseoaurantiacus M045] Length = 106 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|254381842|ref|ZP_04997205.1| ferredoxin [Streptomyces sp. Mg1] gi|194340750|gb|EDX21716.1| ferredoxin [Streptomyces sp. Mg1] Length = 108 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|325964023|ref|YP_004241929.1| ferredoxin [Arthrobacter phenanthrenivorans Sphe3] gi|323470110|gb|ADX73795.1| ferredoxin [Arthrobacter phenanthrenivorans Sphe3] Length = 108 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPEEWADYYKANVEF 75 >gi|220913278|ref|YP_002488587.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrobacter chlorophenolicus A6] gi|219860156|gb|ACL40498.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrobacter chlorophenolicus A6] Length = 108 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPDEWADYYKANVEF 75 >gi|314922814|gb|EFS86645.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL001PA1] Length = 135 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 +TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 90 LPGDQEKFLDINAEFFNEL 108 >gi|314966245|gb|EFT10344.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL082PA2] gi|314980771|gb|EFT24865.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA3] gi|315090258|gb|EFT62234.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA4] gi|315093409|gb|EFT65385.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL060PA1] gi|315102964|gb|EFT74940.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA2] gi|327327026|gb|EGE68807.1| ferredoxin [Propionibacterium acnes HL103PA1] gi|327331132|gb|EGE72872.1| ferredoxin [Propionibacterium acnes HL097PA1] Length = 135 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 +TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 90 LPGDQEKFLDINAEFFNEL 108 >gi|116671359|ref|YP_832292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrobacter sp. FB24] gi|116611468|gb|ABK04192.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Arthrobacter sp. FB24] Length = 108 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPDEWADYYKANVEF 75 >gi|313763939|gb|EFS35303.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL013PA1] gi|313771530|gb|EFS37496.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL074PA1] gi|313808190|gb|EFS46664.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA2] gi|313811344|gb|EFS49058.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL083PA1] gi|313812527|gb|EFS50241.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL025PA1] gi|313814934|gb|EFS52648.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL059PA1] gi|313818956|gb|EFS56670.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL046PA2] gi|313820786|gb|EFS58500.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL036PA1] gi|313822450|gb|EFS60164.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL036PA2] gi|313825755|gb|EFS63469.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL063PA1] gi|313830903|gb|EFS68617.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL007PA1] gi|313833330|gb|EFS71044.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL056PA1] gi|314914976|gb|EFS78807.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA4] gi|314918703|gb|EFS82534.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA1] gi|314920506|gb|EFS84337.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA3] gi|314932180|gb|EFS96011.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL067PA1] gi|314954553|gb|EFS98959.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL027PA1] gi|314958650|gb|EFT02752.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA1] gi|314959746|gb|EFT03848.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA2] gi|314968248|gb|EFT12347.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA1] gi|314973790|gb|EFT17886.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL053PA1] gi|314976441|gb|EFT20536.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL045PA1] gi|314979128|gb|EFT23222.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL072PA2] gi|314983280|gb|EFT27372.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA1] gi|314986685|gb|EFT30777.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA2] gi|314989427|gb|EFT33518.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA3] gi|315080151|gb|EFT52127.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL078PA1] gi|315084033|gb|EFT56009.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL027PA2] gi|315085234|gb|EFT57210.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA3] gi|315089149|gb|EFT61125.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL072PA1] gi|315096565|gb|EFT68541.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL038PA1] gi|315098973|gb|EFT70949.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL059PA2] gi|315100787|gb|EFT72763.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL046PA1] gi|315107273|gb|EFT79249.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL030PA1] gi|315108004|gb|EFT79980.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL030PA2] gi|327326814|gb|EGE68597.1| ferredoxin [Propionibacterium acnes HL096PA2] gi|327330489|gb|EGE72236.1| ferredoxin [Propionibacterium acnes HL096PA3] gi|327442984|gb|EGE89638.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL043PA1] gi|327445106|gb|EGE91760.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL043PA2] gi|327446920|gb|EGE93574.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL013PA2] gi|327450087|gb|EGE96741.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA3] gi|327455358|gb|EGF02013.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL083PA2] gi|328752501|gb|EGF66117.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL020PA1] gi|328752753|gb|EGF66369.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA1] gi|328759326|gb|EGF72942.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL025PA2] gi|328760188|gb|EGF73761.1| ferredoxin [Propionibacterium acnes HL099PA1] Length = 135 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 +TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 90 LPGDQEKFLDINAEFFNEL 108 >gi|256397063|ref|YP_003118627.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256363289|gb|ACU76786.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Catenulispora acidiphila DSM 44928] Length = 109 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIALPCVDVKDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEQWKDYYKANVEF 75 >gi|84494677|ref|ZP_00993796.1| ferredoxin [Janibacter sp. HTCC2649] gi|84384170|gb|EAQ00050.1| ferredoxin [Janibacter sp. HTCC2649] Length = 109 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPEQWADYYKANVEF 75 >gi|313836966|gb|EFS74680.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA2] gi|314929443|gb|EFS93274.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL044PA1] gi|314971472|gb|EFT15570.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA3] Length = 135 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 +TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 30 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 89 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 90 LPGDQEKFLDINAEFFNEL 108 >gi|260906738|ref|ZP_05915060.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 110 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/55 (67%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + CI K CV+ CPVDC YEGE L IHPDECIDCG CEP CPV+AI Sbjct: 1 MTYVIAQPCIDVKDKSCVDECPVDCIYEGERSLYIHPDECIDCGACEPVCPVEAI 55 >gi|313791594|gb|EFS39712.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA1] Length = 144 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 +TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI D Sbjct: 39 VTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 98 Query: 60 EPG-LELWLKINSEYATQW 77 PG E +L IN+E+ + Sbjct: 99 LPGDQEKFLDINAEFFNEL 117 >gi|118469543|ref|YP_889369.1| ferredoxin [Mycobacterium smegmatis str. MC2 155] gi|118170830|gb|ABK71726.1| ferredoxin [Mycobacterium smegmatis str. MC2 155] Length = 107 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAI 55 >gi|182436183|ref|YP_001823902.1| putative ferredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|239944071|ref|ZP_04696008.1| putative ferredoxin [Streptomyces roseosporus NRRL 15998] gi|239990523|ref|ZP_04711187.1| putative ferredoxin [Streptomyces roseosporus NRRL 11379] gi|291447539|ref|ZP_06586929.1| 4Fe-4S binding domain containing protein [Streptomyces roseosporus NRRL 15998] gi|326776809|ref|ZP_08236074.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptomyces cf. griseus XylebKG-1] gi|178464699|dbj|BAG19219.1| putative ferredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|291350486|gb|EFE77390.1| 4Fe-4S binding domain containing protein [Streptomyces roseosporus NRRL 15998] gi|326657142|gb|EGE41988.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 106 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|21223505|ref|NP_629284.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|256785389|ref|ZP_05523820.1| ferredoxin [Streptomyces lividans TK24] gi|289769285|ref|ZP_06528663.1| ferredoxin [Streptomyces lividans TK24] gi|9967647|emb|CAC05765.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|289699484|gb|EFD66913.1| ferredoxin [Streptomyces lividans TK24] Length = 106 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|240171688|ref|ZP_04750347.1| ferredoxin FdxC [Mycobacterium kansasii ATCC 12478] Length = 108 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 61 VPDQWTQYTQINADF 75 >gi|239738513|gb|ACS13712.1| PtmO9 [Streptomyces platensis] Length = 111 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|29829671|ref|NP_824305.1| ferredoxin [Streptomyces avermitilis MA-4680] gi|29606780|dbj|BAC70840.1| putative ferredoxin [Streptomyces avermitilis MA-4680] Length = 106 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|239982109|ref|ZP_04704633.1| ferredoxin [Streptomyces albus J1074] gi|291453957|ref|ZP_06593347.1| ferredoxin [Streptomyces albus J1074] gi|291356906|gb|EFE83808.1| ferredoxin [Streptomyces albus J1074] Length = 106 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|282865413|ref|ZP_06274465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282559886|gb|EFB65436.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 106 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|290957604|ref|YP_003488786.1| ferredoxin [Streptomyces scabiei 87.22] gi|260647130|emb|CBG70229.1| ferredoxin [Streptomyces scabiei 87.22] Length = 105 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|33597853|ref|NP_885496.1| ferredoxin [Bordetella parapertussis 12822] gi|33602756|ref|NP_890316.1| ferredoxin [Bordetella bronchiseptica RB50] gi|33574282|emb|CAE38615.1| ferredoxin [Bordetella parapertussis] gi|33577198|emb|CAE35755.1| ferredoxin [Bordetella bronchiseptica RB50] Length = 90 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC PECP +AI + D ++ +N E + Sbjct: 1 MDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEEDVPQDQVPFIALNVELSA 60 Query: 76 QWPNITTKKESLPSAAKMDGVKQKYE 101 ++P+I+ K+ L A + +GV+ K + Sbjct: 61 EFPSISRAKKPLEDADQWNGVQDKLQ 86 >gi|239929111|ref|ZP_04686064.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|291437447|ref|ZP_06576837.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|302558592|ref|ZP_07310934.1| ferredoxin [Streptomyces griseoflavus Tu4000] gi|291340342|gb|EFE67298.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|302476210|gb|EFL39303.1| ferredoxin [Streptomyces griseoflavus Tu4000] Length = 105 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|118470782|ref|YP_885518.1| ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] gi|118172069|gb|ABK72965.1| putative ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] Length = 114 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIGRPCVDVKDRACVDECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKM 93 L+ + + N+++ T P S AAK+ Sbjct: 61 LPEDLQPYQEENAKFFTDVLPGRAQPLGSPGGAAKL 96 >gi|88856142|ref|ZP_01130803.1| ferredoxin [marine actinobacterium PHSC20C1] gi|88814710|gb|EAR24571.1| ferredoxin [marine actinobacterium PHSC20C1] Length = 111 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 8/115 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDLKDRACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + K N E+ + S P A GV K P G + Sbjct: 61 LPDKWADYYKANVEF------FDLLEVSSPGGAAKVGVIHKDHALIVALPEGGGS 109 >gi|307332364|ref|ZP_07611435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|297157503|gb|ADI07215.1| ferredoxin [Streptomyces bingchenggensis BCW-1] gi|306881977|gb|EFN13092.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 108 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|111025066|ref|YP_707486.1| ferredoxin [Rhodococcus jostii RHA1] gi|110824045|gb|ABG99328.1| ferredoxin [Rhodococcus jostii RHA1] Length = 128 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E CI CVE CPVDC YEG L IHPDECIDCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAIYYEAD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E + N+ + + +P A G + S +P Sbjct: 61 LPARWEAFTDDNARFFHSPLPGASAALGMPGGAGKLGRLAADTELVSGHP 110 >gi|219848770|ref|YP_002463203.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543029|gb|ACL24767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 78 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/58 (65%), Positives = 43/58 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+TE CI K CV VCPVDC YEG++ I+PDECIDCG CEPECPV+AI D Sbjct: 1 MPYVITEPCIGTKDASCVAVCPVDCIYEGDDQYYINPDECIDCGACEPECPVEAIFAD 58 >gi|24217168|ref|NP_714651.1| ferredoxin [Leptospira interrogans serovar Lai str. 56601] gi|45655667|ref|YP_003476.1| ferredoxin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24202210|gb|AAN51666.1| hypothetical protein LB_107 [Leptospira interrogans serovar Lai str. 56601] gi|45602638|gb|AAS72113.1| ferredoxin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 99 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE C CK+T C VCPV+ F EG + L I P CIDC C PECPV+AI PD E Sbjct: 1 MAYVVTEPCRNCKYTYCAAVCPVEAFREGTDCLYIEPSVCIDCNKCRPECPVEAIYPDYE 60 Query: 61 PGL--ELWLKINSEYATQWPNITTKKESL 87 W+++N++ A +P I K L Sbjct: 61 VPFVWRDWIEVNAQKAKCYPTILDVKIPL 89 >gi|119961114|ref|YP_948508.1| ferredoxin [Arthrobacter aurescens TC1] gi|119947973|gb|ABM06884.1| ferredoxin [Arthrobacter aurescens TC1] Length = 132 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 25 VTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 84 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 85 TPEEWADYYKANVEF 99 >gi|118618156|ref|YP_906488.1| ferredoxin FdxC_1 [Mycobacterium ulcerans Agy99] gi|183983410|ref|YP_001851701.1| ferredoxin FdxC_1 [Mycobacterium marinum M] gi|118570266|gb|ABL05017.1| ferredoxin FdxC_1 [Mycobacterium ulcerans Agy99] gi|183176736|gb|ACC41846.1| ferredoxin FdxC_1 [Mycobacterium marinum M] Length = 108 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + D Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQW 77 + +IN ++ ++ Sbjct: 61 LPAEYSGYTQINVDFFSEL 79 >gi|15608317|ref|NP_215693.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Rv] gi|15840620|ref|NP_335657.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31792371|ref|NP_854864.1| ferredoxin FdxC [Mycobacterium bovis AF2122/97] gi|121637109|ref|YP_977332.1| putative ferredoxin fdxC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660965|ref|YP_001282488.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Ra] gi|167966778|ref|ZP_02549055.1| ferredoxin fdxC [Mycobacterium tuberculosis H37Ra] gi|215403016|ref|ZP_03415197.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|215430060|ref|ZP_03427979.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|215445354|ref|ZP_03432106.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|218752871|ref|ZP_03531667.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|219557068|ref|ZP_03536144.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|224989582|ref|YP_002644269.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253799779|ref|YP_003032780.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 1435] gi|254231445|ref|ZP_04924772.1| ferredoxin fdxC [Mycobacterium tuberculosis C] gi|254364080|ref|ZP_04980126.1| ferredoxin fdxC [Mycobacterium tuberculosis str. Haarlem] gi|254550183|ref|ZP_05140630.1| ferredoxin fdxC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186110|ref|ZP_05763584.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|260200225|ref|ZP_05767716.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|260204430|ref|ZP_05771921.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289442611|ref|ZP_06432355.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|289446767|ref|ZP_06436511.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|289555034|ref|ZP_06444244.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 605] gi|289569181|ref|ZP_06449408.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|289573837|ref|ZP_06454064.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289749720|ref|ZP_06509098.1| LOW QUALITY PROTEIN: ferredoxin fdxC [Mycobacterium tuberculosis T92] gi|289753247|ref|ZP_06512625.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|289757273|ref|ZP_06516651.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|289761323|ref|ZP_06520701.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|294993365|ref|ZP_06799056.1| ferredoxin fdxC [Mycobacterium tuberculosis 210] gi|297633725|ref|ZP_06951505.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 4207] gi|297730711|ref|ZP_06959829.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN R506] gi|306775348|ref|ZP_07413685.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu001] gi|306781745|ref|ZP_07420082.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu002] gi|306783896|ref|ZP_07422218.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu003] gi|306788262|ref|ZP_07426584.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu004] gi|306792587|ref|ZP_07430889.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu005] gi|306796993|ref|ZP_07435295.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu006] gi|306802871|ref|ZP_07439539.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu008] gi|306807053|ref|ZP_07443721.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu007] gi|306967258|ref|ZP_07479919.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu009] gi|306971442|ref|ZP_07484103.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu010] gi|307079169|ref|ZP_07488339.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu011] gi|307083730|ref|ZP_07492843.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu012] gi|313658042|ref|ZP_07814922.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN V2475] gi|2695961|emb|CAA15854.1| PROBABLE FERREDOXIN FDXC [Mycobacterium tuberculosis H37Rv] gi|13880802|gb|AAK45471.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31617959|emb|CAD94071.1| PROBABLE FERREDOXIN FDXC [Mycobacterium bovis AF2122/97] gi|121492756|emb|CAL71227.1| Probable ferredoxin fdxC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600504|gb|EAY59514.1| ferredoxin fdxC [Mycobacterium tuberculosis C] gi|134149594|gb|EBA41639.1| ferredoxin fdxC [Mycobacterium tuberculosis str. Haarlem] gi|148505117|gb|ABQ72926.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Ra] gi|224772695|dbj|BAH25501.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253321282|gb|ACT25885.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 1435] gi|289415530|gb|EFD12770.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|289419725|gb|EFD16926.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|289439666|gb|EFD22159.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 605] gi|289538268|gb|EFD42846.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289542935|gb|EFD46583.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|289690307|gb|EFD57736.1| LOW QUALITY PROTEIN: ferredoxin fdxC [Mycobacterium tuberculosis T92] gi|289693834|gb|EFD61263.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|289708829|gb|EFD72845.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|289712837|gb|EFD76849.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|308216149|gb|EFO75548.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu001] gi|308325500|gb|EFP14351.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu002] gi|308331334|gb|EFP20185.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu003] gi|308335151|gb|EFP24002.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu004] gi|308338958|gb|EFP27809.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu005] gi|308342625|gb|EFP31476.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu006] gi|308346514|gb|EFP35365.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu007] gi|308350434|gb|EFP39285.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu008] gi|308355081|gb|EFP43932.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu009] gi|308359036|gb|EFP47887.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu010] gi|308362963|gb|EFP51814.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu011] gi|308366614|gb|EFP55465.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu012] gi|326902801|gb|EGE49734.1| ferredoxin fdxC [Mycobacterium tuberculosis W-148] gi|328459524|gb|AEB04947.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 4207] Length = 108 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 61 VPEQWSHYTQINADF 75 >gi|302542741|ref|ZP_07295083.1| ferredoxin [Streptomyces hygroscopicus ATCC 53653] gi|302460359|gb|EFL23452.1| ferredoxin [Streptomyces himastatinicus ATCC 53653] Length = 136 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 29 VTYVIAQPCVDLKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 88 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 89 TPEEWKDYYKANVEF 103 >gi|328884828|emb|CCA58067.1| ferredoxin [Streptomyces venezuelae ATCC 10712] Length = 106 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|315443225|ref|YP_004076104.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315261528|gb|ADT98269.1| ferredoxin [Mycobacterium sp. Spyr1] Length = 107 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 61 VPDQWSSYTQINADF 75 >gi|308177963|ref|YP_003917369.1| 4Fe-4S ferredoxin domain-containing protein [Arthrobacter arilaitensis Re117] gi|307745426|emb|CBT76398.1| 4Fe-4S ferredoxin domain-containing protein [Arthrobacter arilaitensis Re117] Length = 107 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ + C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAQPCVDVKDKACVEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|269925717|ref|YP_003322340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789377|gb|ACZ41518.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 81 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 4/77 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKP- 57 M YV+TE CI K CVEVCPVDC Y + IHPDECIDCG CEPECPV AI P Sbjct: 1 MPYVITEPCIGVKDASCVEVCPVDCIYTDDEAPMYYIHPDECIDCGACEPECPVSAIYPE 60 Query: 58 DTEP-GLELWLKINSEY 73 D+ P + +++IN++Y Sbjct: 61 DSVPEQWQHYIQINADY 77 >gi|254388886|ref|ZP_05004117.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294814826|ref|ZP_06773469.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|326443204|ref|ZP_08217938.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|197702604|gb|EDY48416.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294327425|gb|EFG09068.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] Length = 105 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGRRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|15827784|ref|NP_302047.1| ferredoxin [Mycobacterium leprae TN] gi|221230261|ref|YP_002503677.1| ferredoxin [Mycobacterium leprae Br4923] gi|13093336|emb|CAC30439.1| ferredoxin [Mycobacterium leprae] gi|219933368|emb|CAR71583.1| ferredoxin [Mycobacterium leprae Br4923] Length = 108 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN ++ + Sbjct: 61 VPEQWSHYTQINVDFFVE 78 >gi|215410806|ref|ZP_03419614.1| ferredoxin fdxC [Mycobacterium tuberculosis 94_M4241A] gi|298524675|ref|ZP_07012084.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494469|gb|EFI29763.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 108 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 61 VPEQWSHYTQINADF 75 >gi|318058410|ref|ZP_07977133.1| ferredoxin [Streptomyces sp. SA3_actG] gi|318080441|ref|ZP_07987773.1| ferredoxin [Streptomyces sp. SA3_actF] Length = 106 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|117929063|ref|YP_873614.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117649526|gb|ABK53628.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 108 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY++ + C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYIIAQPCVDVKDRACVDECPVDCIYEGQRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + + K+N E+ Sbjct: 61 LPDQWKDYYKVNVEF 75 >gi|118616772|ref|YP_905104.1| ferredoxin FdxC [Mycobacterium ulcerans Agy99] gi|118568882|gb|ABL03633.1| ferredoxin FdxC [Mycobacterium ulcerans Agy99] Length = 108 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 61 VPEQWSQYTQINADF 75 >gi|226359497|ref|YP_002777274.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226237981|dbj|BAH48329.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 128 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/55 (67%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E CI CVE CPVDC YEG L IHPDECIDCG CEP CPV+AI Sbjct: 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAI 55 >gi|320008744|gb|ADW03594.1| putative ferredoxin [Streptomyces flavogriseus ATCC 33331] Length = 106 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|254818770|ref|ZP_05223771.1| ferredoxin [Mycobacterium intracellulare ATCC 13950] Length = 108 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPDQWSQYTQINADFFAE 78 >gi|183984247|ref|YP_001852538.1| ferredoxin FdxC [Mycobacterium marinum M] gi|183177573|gb|ACC42683.1| ferredoxin FdxC [Mycobacterium marinum M] Length = 108 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPEQWSQYTQINADFFAE 78 >gi|41408705|ref|NP_961541.1| FdxC_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465894|ref|YP_880561.1| ferredoxin [Mycobacterium avium 104] gi|41397063|gb|AAS04924.1| FdxC_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167181|gb|ABK68078.1| ferredoxin [Mycobacterium avium 104] Length = 108 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPDQWSQYTQINADFFAE 78 >gi|260904087|ref|ZP_05912409.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 107 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY++ + C+ K CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYIIAQPCVDLKDKACVDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPEEWSEYYKANVEF 75 >gi|296169415|ref|ZP_06851037.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895917|gb|EFG75610.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 108 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPEQWSQYTQINADFFVE 78 >gi|297202177|ref|ZP_06919574.1| ferredoxin [Streptomyces sviceus ATCC 29083] gi|197713616|gb|EDY57650.1| ferredoxin [Streptomyces sviceus ATCC 29083] Length = 105 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPDEWKDYYKANVEF 75 >gi|254774193|ref|ZP_05215709.1| ferredoxin [Mycobacterium avium subsp. avium ATCC 25291] Length = 108 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPDQWSQYTQINADFFAE 78 >gi|296170063|ref|ZP_06851666.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895273|gb|EFG74983.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 113 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 6 VTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 65 Query: 59 TEPGLELWLKINSEYATQ 76 + +IN+++ T+ Sbjct: 66 VPDQWSQYTQINADFFTE 83 >gi|297192269|ref|ZP_06909667.1| ferredoxin [Streptomyces pristinaespiralis ATCC 25486] gi|190333637|gb|ACE73826.1| putative ferredoxin [Streptomyces peucetius ATCC 27952] gi|297151282|gb|EFH31065.1| ferredoxin [Streptomyces pristinaespiralis ATCC 25486] Length = 106 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEF 75 >gi|294631226|ref|ZP_06709786.1| ferredoxin [Streptomyces sp. e14] gi|292834559|gb|EFF92908.1| ferredoxin [Streptomyces sp. e14] Length = 143 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 38 VTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAI 92 >gi|159896706|ref|YP_001542953.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889745|gb|ABX02825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 77 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/55 (65%), Positives = 42/55 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ E C+ K + CV+VCPVDC YEGE+ I+PDECIDCG CEPECPV AI Sbjct: 1 MAYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAI 55 >gi|311111810|ref|YP_003983032.1| ferredoxin [Rothia dentocariosa ATCC 17931] gi|310943304|gb|ADP39598.1| ferredoxin [Rothia dentocariosa ATCC 17931] Length = 160 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/94 (51%), Positives = 53/94 (56%), Gaps = 7/94 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 55 MTYVIALPCVDVKDRACVEECPVDCIYEGDRTLYIHPDECVDCGACEPVCPVEAIYYEDD 114 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 P E W SEY T S AAKM Sbjct: 115 VP--EEW----SEYITANAEFFDDLGSPGGAAKM 142 >gi|284033401|ref|YP_003383332.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Kribbella flavida DSM 17836] gi|283812694|gb|ADB34533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kribbella flavida DSM 17836] Length = 108 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDLKDLACVEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|240170645|ref|ZP_04749304.1| ferredoxin FdxA_1 [Mycobacterium kansasii ATCC 12478] Length = 118 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKM 93 LE + N+ + T+ P S AAK+ Sbjct: 61 LPAELEPYRADNAAFFTETLPGRDEPLGSPGGAAKI 96 >gi|332671395|ref|YP_004454403.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulomonas fimi ATCC 484] gi|332340433|gb|AEE47016.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas fimi ATCC 484] Length = 108 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|168703585|ref|ZP_02735862.1| ferredoxin [Gemmata obscuriglobus UQM 2246] Length = 103 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVT NC CK+TDC VCPV+CFY+ E L I P++CIDC C PECPV+AI +P+ Sbjct: 1 MPHVVTSNCNDCKYTDCCVVCPVECFYQDETMLYIDPEDCIDCEACVPECPVEAIYSEPN 60 Query: 59 TEPGLELWLKINSEYAT 75 ++++N+E A+ Sbjct: 61 VPSQWSSFIQLNAERAS 77 >gi|239918039|ref|YP_002957597.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|281415782|ref|ZP_06247524.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|289705240|ref|ZP_06501639.1| putative ferredoxin [Micrococcus luteus SK58] gi|239839246|gb|ACS31043.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|289557990|gb|EFD51282.1| putative ferredoxin [Micrococcus luteus SK58] Length = 108 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIALPCVDVKDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPDEWAEYYKANVEF 75 >gi|296393263|ref|YP_003658147.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180410|gb|ADG97316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Segniliparus rotundus DSM 44985] Length = 108 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVMDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|296128848|ref|YP_003636098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas flavigena DSM 20109] gi|296020663|gb|ADG73899.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas flavigena DSM 20109] Length = 108 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|296119440|ref|ZP_06837998.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] gi|295967323|gb|EFG80590.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] Length = 107 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E WL+ N A + ++ + Sbjct: 61 VPDE-WLEYNDANAAFFDDLGS 81 >gi|295836680|ref|ZP_06823613.1| ferredoxin [Streptomyces sp. SPB74] gi|302521743|ref|ZP_07274085.1| ferredoxin [Streptomyces sp. SPB78] gi|295826155|gb|EDY46645.2| ferredoxin [Streptomyces sp. SPB74] gi|302430638|gb|EFL02454.1| ferredoxin [Streptomyces sp. SPB78] Length = 137 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 32 VTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 91 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 92 TPEEWKDYYKANVEF 106 >gi|320094299|ref|ZP_08026090.1| ferredoxin [Actinomyces sp. oral taxon 178 str. F0338] gi|319978765|gb|EFW10317.1| ferredoxin [Actinomyces sp. oral taxon 178 str. F0338] Length = 114 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 10/100 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV+ CPVDC YEGE L IHP+EC+DCG CEP CP +AI + D Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 +L+ N+++ ++ + P A+ GV++ Sbjct: 61 LPDEWSDYLRANADFFSELGS--------PGGAQRTGVQE 92 >gi|108800994|ref|YP_641191.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119870135|ref|YP_940087.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126436831|ref|YP_001072522.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108771413|gb|ABG10135.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119696224|gb|ABL93297.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126236631|gb|ABO00032.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 107 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAI 55 >gi|296270986|ref|YP_003653618.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296093773|gb|ADG89725.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobispora bispora DSM 43833] Length = 108 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVLDKACVEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAI 55 >gi|255326955|ref|ZP_05368031.1| ferredoxin [Rothia mucilaginosa ATCC 25296] gi|283457664|ref|YP_003362249.1| ferredoxin [Rothia mucilaginosa DY-18] gi|255296172|gb|EET75513.1| ferredoxin [Rothia mucilaginosa ATCC 25296] gi|283133664|dbj|BAI64429.1| ferredoxin [Rothia mucilaginosa DY-18] Length = 106 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/94 (50%), Positives = 54/94 (57%), Gaps = 7/94 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDRACVEECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 P E W SEY + + S AAK+ Sbjct: 61 VP--EEW----SEYVSANADFFDDLGSPGGAAKL 88 >gi|300741914|ref|ZP_07071935.1| ferredoxin [Rothia dentocariosa M567] gi|300381099|gb|EFJ77661.1| ferredoxin [Rothia dentocariosa M567] Length = 106 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/94 (51%), Positives = 53/94 (56%), Gaps = 7/94 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ C+ K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDRACVEECPVDCIYEGDRTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 P E W SEY T S AAKM Sbjct: 61 VP--EEW----SEYITANAEFFDDLGSPGGAAKM 88 >gi|311740712|ref|ZP_07714539.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] gi|311304232|gb|EFQ80308.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] Length = 107 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDIMDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E WL N A + ++ + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGS 81 >gi|119715428|ref|YP_922393.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119536089|gb|ABL80706.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 108 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 42/55 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+++ C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVISQPCVDVKDRACVDECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|257054691|ref|YP_003132523.1| ferredoxin [Saccharomonospora viridis DSM 43017] gi|256584563|gb|ACU95696.1| ferredoxin [Saccharomonospora viridis DSM 43017] Length = 106 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVLDKSCIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAI 55 >gi|315606086|ref|ZP_07881117.1| ferredoxin [Actinomyces sp. oral taxon 180 str. F0310] gi|315312368|gb|EFU60454.1| ferredoxin [Actinomyces sp. oral taxon 180 str. F0310] Length = 113 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 10/99 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV+ CPVDC YEGE L IHP+EC+DCG CEP CP +AI + D Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERTLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 +L+ N+++ Q P A+ GV+ Sbjct: 61 LPDEWSDYLRANADFFNQL--------GSPGGAQKTGVQ 91 >gi|227832808|ref|YP_002834515.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255324435|ref|ZP_05365552.1| ferredoxin [Corynebacterium tuberculostearicum SK141] gi|262182703|ref|ZP_06042124.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|227453824|gb|ACP32577.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255298341|gb|EET77641.1| ferredoxin [Corynebacterium tuberculostearicum SK141] Length = 107 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRGCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E WL N A + ++ + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGS 81 >gi|117927707|ref|YP_872258.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648170|gb|ABK52272.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 117 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/55 (65%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAI 55 >gi|302553940|ref|ZP_07306282.1| ferredoxin [Streptomyces viridochromogenes DSM 40736] gi|302471558|gb|EFL34651.1| ferredoxin [Streptomyces viridochromogenes DSM 40736] Length = 134 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 30 VTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 89 Query: 59 TEPGLELWLKINSEY 73 T + + K N E+ Sbjct: 90 TPEEWKDYYKANVEF 104 >gi|229819624|ref|YP_002881150.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beutenbergia cavernae DSM 12333] gi|229565537|gb|ACQ79388.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beutenbergia cavernae DSM 12333] Length = 105 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDIKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|148822393|ref|YP_001287147.1| ferredoxin fdxC [Mycobacterium tuberculosis F11] gi|289744922|ref|ZP_06504300.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|148720920|gb|ABR05545.1| ferredoxin fdxC [Mycobacterium tuberculosis F11] gi|289685450|gb|EFD52938.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|323720340|gb|EGB29436.1| ferredoxin fdxC [Mycobacterium tuberculosis CDC1551A] Length = 126 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 +TY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 19 VTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD 78 Query: 59 TEPGLELWLKINSEY 73 + +IN+++ Sbjct: 79 VPEQWSHYTQINADF 93 >gi|111017434|ref|YP_700406.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110816964|gb|ABG92248.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 542 Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YVVT+NC C CV VCPVDC Y+ L I P CIDCG C CPV Sbjct: 1 MAYVVTQNC--CNDATCVAVCPVDCIHPTPAEREYQRTEMLYIDPGACIDCGACADVCPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWP 78 DAI P P ++ + +IN+EY + P Sbjct: 59 DAIVPGDAPAPDIDRYREINAEYFQRNP 86 >gi|258653795|ref|YP_003202951.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557020|gb|ACV79962.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 114 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV AI + D Sbjct: 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGARALYIHPDECVDCGACEPVCPVQAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 E + N+ + T ++ + P A G Sbjct: 61 VPNQWEAFTDDNARFFTDTLPGRSQPVASPGGATTIG 97 >gi|227487879|ref|ZP_03918195.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51867] gi|227542520|ref|ZP_03972569.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51866] gi|227092206|gb|EEI27518.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51867] gi|227181718|gb|EEI62690.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51866] Length = 107 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + E C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAEPCVDVKDKACVEECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E W+ N A + ++ + Sbjct: 61 VPDE-WIDYNEANAAFFEDLGS 81 >gi|148654468|ref|YP_001274673.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus sp. RS-1] gi|156740275|ref|YP_001430404.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|148566578|gb|ABQ88723.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Roseiflexus sp. RS-1] gi|156231603|gb|ABU56386.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Roseiflexus castenholzii DSM 13941] Length = 78 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/58 (62%), Positives = 42/58 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y++ E CI K CV VCPVDC YEGE+ I+P+ECIDCG CEPECPV+AI D Sbjct: 1 MAYIIAEPCIGVKDASCVAVCPVDCIYEGEDQYYINPEECIDCGACEPECPVEAIFAD 58 >gi|269955770|ref|YP_003325559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304451|gb|ACZ30001.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 105 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|126436658|ref|YP_001072349.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|126236458|gb|ABN99858.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 548 Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+NC CK CV VCPVDC + G L I P+ CIDCG C ECPV Sbjct: 1 MAYVITQNC--CKDASCVPVCPVDCIRPAGEAGQFVGTEMLYIDPETCIDCGACLEECPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 DAI D + E + +IN+ Y + P Sbjct: 59 DAIYYDEDLPADQERFREINASYFQRHP 86 >gi|269795884|ref|YP_003315339.1| ferredoxin [Sanguibacter keddieii DSM 10542] gi|269098069|gb|ACZ22505.1| ferredoxin [Sanguibacter keddieii DSM 10542] Length = 105 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|88855520|ref|ZP_01130184.1| ferredoxin [marine actinobacterium PHSC20C1] gi|88815427|gb|EAR25285.1| ferredoxin [marine actinobacterium PHSC20C1] Length = 110 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 10/97 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---- 56 MTYV+ + C+ K C++ CPVDC YEG L IHPDEC+DCG C+P CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIDACPVDCIYEGGRSLYIHPDECVDCGACDPVCPVEAIYYVDD 60 Query: 57 -PD-----TEPGLELWLKINSEYATQWPNITTKKESL 87 PD T+ ++ + ++ S T + +SL Sbjct: 61 VPDKWGEYTQANVDFFSELGSPMGAAALGNTGRDDSL 97 >gi|240168739|ref|ZP_04747398.1| FdxC_1 [Mycobacterium kansasii ATCC 12478] Length = 108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I D Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 60 EPG-LELWLKINSEYATQ 76 PG + +IN+++ + Sbjct: 61 LPGEWNEYQQINADFFAE 78 >gi|269793446|ref|YP_003312901.1| ferredoxin [Sanguibacter keddieii DSM 10542] gi|269095631|gb|ACZ20067.1| ferredoxin [Sanguibacter keddieii DSM 10542] Length = 108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|271969626|ref|YP_003343822.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270512801|gb|ACZ91079.1| 4Fe-4S ferredoxin iron-sulfur binding domain- containing protein [Streptosporangium roseum DSM 43021] Length = 108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAI 55 >gi|284989663|ref|YP_003408217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062908|gb|ADB73846.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+T+ C+ C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVITQACVDVLDKACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|317506366|ref|ZP_07964177.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255329|gb|EFV14588.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 108 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVLDKACIEECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|227548437|ref|ZP_03978486.1| ferredoxin [Corynebacterium lipophiloflavum DSM 44291] gi|227079481|gb|EEI17444.1| ferredoxin [Corynebacterium lipophiloflavum DSM 44291] Length = 110 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 4 MTYIIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAI 58 >gi|120012|sp|P00215|FER_MYCSM RecName: Full=Ferredoxin Length = 106 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/54 (62%), Positives = 39/54 (72%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAI 54 >gi|19552328|ref|NP_600330.1| ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|62389992|ref|YP_225394.1| ferredoxin [Corynebacterium glutamicum ATCC 13032] gi|145295244|ref|YP_001138065.1| hypothetical protein cgR_1185 [Corynebacterium glutamicum R] gi|21323869|dbj|BAB98495.1| Ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|41325328|emb|CAF19808.1| FERREDOXIN [Corynebacterium glutamicum ATCC 13032] gi|140845164|dbj|BAF54163.1| hypothetical protein [Corynebacterium glutamicum R] Length = 105 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E WL N A + ++ + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGS 81 >gi|108802249|ref|YP_642446.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119871402|ref|YP_941354.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126438231|ref|YP_001073922.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108772668|gb|ABG11390.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119697491|gb|ABL94564.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126238031|gb|ABO01432.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 115 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 3/100 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYVIGKACVDVMDRSCVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPS---AAKMDGVK 97 + + A + + + E L S AAK+ V+ Sbjct: 61 LPADQREHLADNAAFFFDTLAGRDEPLGSPGGAAKVGPVQ 100 >gi|311743743|ref|ZP_07717549.1| ferredoxin [Aeromicrobium marinum DSM 15272] gi|311312873|gb|EFQ82784.1| ferredoxin [Aeromicrobium marinum DSM 15272] Length = 107 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 5/100 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYVIAQPCVDLKDRACVDECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 E W +EY + K S AAK+ V + Sbjct: 61 TPAE-W----AEYYDANVHFFDKLGSPGGAAKLGVVDDDH 95 >gi|302524318|ref|ZP_07276660.1| ferredoxin [Streptomyces sp. AA4] gi|302433213|gb|EFL05029.1| ferredoxin [Streptomyces sp. AA4] Length = 106 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVLDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAI 55 >gi|300782955|ref|YP_003763246.1| ferredoxin [Amycolatopsis mediterranei U32] gi|269784343|emb|CBH51373.1| ferredoxin [Amycolatopsis balhimycina] gi|299792469|gb|ADJ42844.1| ferredoxin [Amycolatopsis mediterranei U32] Length = 106 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVLDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAI 55 >gi|297626788|ref|YP_003688551.1| Ferredoxin [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922553|emb|CBL57126.1| Ferredoxin [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 106 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CP +AI + D Sbjct: 1 MTYVIALPCVDVKDKACVEECPVDCIYEGERTLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + W +N+ + ++ Sbjct: 61 LPDEYKEWYDVNANFFSE 78 >gi|269125402|ref|YP_003298772.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310360|gb|ACY96734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomonospora curvata DSM 43183] Length = 107 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGKRQLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + + K+N+E+ Sbjct: 61 IPDQWKDFYKVNAEF 75 >gi|163847117|ref|YP_001635161.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524953|ref|YP_002569424.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668406|gb|ABY34772.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448832|gb|ACM53098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 78 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/58 (62%), Positives = 42/58 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y++ E CI K CV VCPVDC YEG++ I+PDECIDCG CEPECPV+AI D Sbjct: 1 MPYIIAEPCIGTKDASCVAVCPVDCIYEGDDQYYINPDECIDCGACEPECPVEAIFAD 58 >gi|300781508|ref|ZP_07091362.1| ferredoxin [Corynebacterium genitalium ATCC 33030] gi|300533215|gb|EFK54276.1| ferredoxin [Corynebacterium genitalium ATCC 33030] Length = 107 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDLLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAI 55 >gi|225022906|ref|ZP_03712098.1| hypothetical protein CORMATOL_02952 [Corynebacterium matruchotii ATCC 33806] gi|305682158|ref|ZP_07404962.1| ferredoxin [Corynebacterium matruchotii ATCC 14266] gi|224944129|gb|EEG25338.1| hypothetical protein CORMATOL_02952 [Corynebacterium matruchotii ATCC 33806] gi|305658631|gb|EFM48134.1| ferredoxin [Corynebacterium matruchotii ATCC 14266] Length = 105 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVMDRACVEECPVDCIYEGQRSLYIHPDECVDCGACEPACPVEAI 55 >gi|300858189|ref|YP_003783172.1| ferredoxin [Corynebacterium pseudotuberculosis FRC41] gi|300685643|gb|ADK28565.1| Ferredoxin [Corynebacterium pseudotuberculosis FRC41] gi|302205911|gb|ADL10253.1| ferredoxin [Corynebacterium pseudotuberculosis C231] gi|302330467|gb|ADL20661.1| ferredoxin [Corynebacterium pseudotuberculosis 1002] gi|308276146|gb|ADO26045.1| ferredoxin [Corynebacterium pseudotuberculosis I19] Length = 105 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E WL N A + ++ + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGS 81 >gi|120029|sp|P13279|FER_STRGR RecName: Full=Ferredoxin Length = 105 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDT 59 TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + DT Sbjct: 1 TYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDDT 60 Query: 60 EPGLELWLKINSEY 73 + + K N E+ Sbjct: 61 PEEWKDYYKANVEF 74 >gi|308234735|ref|ZP_07665472.1| putative ferredoxin 1 [Gardnerella vaginalis ATCC 14018] gi|311115179|ref|YP_003986400.1| ferredoxin [Gardnerella vaginalis ATCC 14019] gi|310946673|gb|ADP39377.1| ferredoxin [Gardnerella vaginalis ATCC 14019] Length = 106 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + D Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 E + EY + ++ +E+ PS D V Sbjct: 61 VPEEWEWYKDAAIEYFNKLGDLGGAQEAGPSGWDEDRV 98 >gi|158312725|ref|YP_001505233.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|158108130|gb|ABW10327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|331694874|ref|YP_004331113.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326949563|gb|AEA23260.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 108 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ C+E CPVDC YEG + IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDLLDKACIEECPVDCIYEGGRMMYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + K N+E+ Sbjct: 61 VPEQWGAYQKANAEF 75 >gi|288920898|ref|ZP_06415194.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288347730|gb|EFC82011.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|119714164|ref|YP_919306.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119526073|gb|ABL79443.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 117 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MTYV+ + C+ CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIGQPCVDVMDRGCVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 EPG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 PG L +L N+ + ++ + P A G + + P Sbjct: 61 LPGHLTPYLADNALFFSETLEGRSAPVGSPGGASKLGALGADTRLVAGLP 110 >gi|289640678|ref|ZP_06472850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia symbiont of Datisca glomerata] gi|289509567|gb|EFD30494.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia symbiont of Datisca glomerata] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|258654428|ref|YP_003203584.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557653|gb|ACV80595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 108 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVLDRACVEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|312194598|ref|YP_004014659.1| ferredoxin [Frankia sp. EuI1c] gi|311225934|gb|ADP78789.1| ferredoxin [Frankia sp. EuI1c] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|256374918|ref|YP_003098578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Actinosynnema mirum DSM 43827] gi|255919221|gb|ACU34732.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Actinosynnema mirum DSM 43827] Length = 108 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|111225470|ref|YP_716264.1| ferredoxin [Frankia alni ACN14a] gi|111153002|emb|CAJ64749.1| Ferredoxin [Frankia alni ACN14a] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|86742537|ref|YP_482937.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86569399|gb|ABD13208.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 107 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|168700895|ref|ZP_02733172.1| ferredoxin [Gemmata obscuriglobus UQM 2246] Length = 92 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/60 (58%), Positives = 44/60 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT C+ C++TDCV VCP++CFY E L I PD+CIDCG C PECPV+AI D + Sbjct: 1 MAHVVTAPCVGCRYTDCVVVCPMECFYGDERQLYIDPDDCIDCGACAPECPVEAIFLDGD 60 >gi|134097606|ref|YP_001103267.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291008475|ref|ZP_06566448.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|120023|sp|P24496|FER_SACER RecName: Full=Ferredoxin gi|1223836|gb|AAA92023.1| ferredoxin [Saccharopolyspora erythraea] gi|133910229|emb|CAM00342.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 106 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + K N ++ + S AAK+ V + E S P G+ Sbjct: 61 VPDEWAAYTKANVDFFDEL-------GSPGGAAKVGKVDRDVEPVSSLPPQGE 106 >gi|213970229|ref|ZP_03398360.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|213925110|gb|EEB58674.1| ferredoxin [Pseudomonas syringae pv. tomato T1] Length = 89 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA-IKPDT 59 M YVV + C+ CK T CV+VCPVD F + + L I PD CI+CGVCEPECPVDA I P+ Sbjct: 1 MPYVVGKECLSCKSTICVDVCPVDAFRDADYQLVICPDTCIECGVCEPECPVDAIINPEE 60 Query: 60 EPGLEL-WLKINSEYATQWPNI 80 PG + +NSE + P I Sbjct: 61 YPGENHDVIVLNSELSKTSPVI 82 >gi|291302949|ref|YP_003514227.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572169|gb|ADD45134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Stackebrandtia nassauensis DSM 44728] Length = 106 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDLLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|256832039|ref|YP_003160766.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685570|gb|ACV08463.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Jonesia denitrificans DSM 20603] Length = 105 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAKPCVDVKDKACIEECPVDCIYEGNRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|145596271|ref|YP_001160568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Salinispora tropica CNB-440] gi|145305608|gb|ABP56190.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Salinispora tropica CNB-440] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|86743147|ref|YP_483547.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86570009|gb|ABD13818.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 111 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/56 (66%), Positives = 39/56 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 MT+VV CI K T CVE CPVDC YEG L I+PDECIDCG C CPVDAIK Sbjct: 1 MTFVVLSPCIDVKDTACVEECPVDCIYEGSRKLYINPDECIDCGACASVCPVDAIK 56 >gi|297623880|ref|YP_003705314.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165060|gb|ADI14771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Truepera radiovictrix DSM 17093] Length = 78 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/73 (52%), Positives = 46/73 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +++TE CI K CV+VCPV+C YE E+ L IHPDECIDCG C P CPV AI P+ + Sbjct: 1 MPHIITEPCIGVKDKSCVDVCPVECIYEAEDQLYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 61 PGLELWLKINSEY 73 E I Y Sbjct: 61 VPSEWASYIQKNY 73 >gi|159039669|ref|YP_001538922.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Salinispora arenicola CNS-205] gi|157918504|gb|ABV99931.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Salinispora arenicola CNS-205] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|148271844|ref|YP_001221405.1| hypothetical protein CMM_0665 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829774|emb|CAN00693.1| fdxA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|317125728|ref|YP_004099840.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Intrasporangium calvum DSM 43043] gi|315589816|gb|ADU49113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Intrasporangium calvum DSM 43043] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGIRTLYIHPDECVDCGACEPVCPVEAI 55 >gi|226361209|ref|YP_002778987.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239694|dbj|BAH50042.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 541 Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 15/109 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YVVT+NC C CV VCPVDC Y+ L I P CIDCG C CPV Sbjct: 1 MAYVVTQNC--CNDATCVAVCPVDCIHPTPAEREYKRTEMLYIDPGACIDCGACSDVCPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKK---ESLPSAAKMDGV 96 DAI P P ++ + IN+EY + P + LP A GV Sbjct: 59 DAIVPGDAPVPDIDRYRDINAEYFQRNPRSAAPGAHVQPLPIALATAGV 107 >gi|302869764|ref|YP_003838401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315503754|ref|YP_004082641.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora sp. L5] gi|330469998|ref|YP_004407741.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Verrucosispora maris AB-18-032] gi|302572623|gb|ADL48825.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315410373|gb|ADU08490.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora sp. L5] gi|328812969|gb|AEB47141.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Verrucosispora maris AB-18-032] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|238060947|ref|ZP_04605656.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] gi|237882758|gb|EEP71586.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] Length = 108 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|148273357|ref|YP_001222918.1| hypothetical protein CMM_2173 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831287|emb|CAN02243.1| fdxB [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 106 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|170782550|ref|YP_001710883.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] gi|169157119|emb|CAQ02298.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] Length = 106 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|325002600|ref|ZP_08123712.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudonocardia sp. P1] Length = 108 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAEPCVDLLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|320012828|gb|ADW07678.1| ferredoxin [Streptomyces flavogriseus ATCC 33331] Length = 107 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+A+ Sbjct: 1 MTYVIAQPCVDIKDKACIEECPVDCIYEGPRKLYIHPDECVDCGACEPVCPVEAV 55 >gi|25027716|ref|NP_737770.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259506882|ref|ZP_05749782.1| ferredoxin [Corynebacterium efficiens YS-314] gi|23492998|dbj|BAC17970.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259165514|gb|EEW50068.1| ferredoxin [Corynebacterium efficiens YS-314] Length = 105 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E W+ N A + ++ + Sbjct: 61 VPDE-WIDYNEANAAFFDDLGS 81 >gi|323359534|ref|YP_004225930.1| ferredoxin [Microbacterium testaceum StLB037] gi|323275905|dbj|BAJ76050.1| ferredoxin [Microbacterium testaceum StLB037] Length = 106 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|256825753|ref|YP_003149713.1| ferredoxin [Kytococcus sedentarius DSM 20547] gi|256689146|gb|ACV06948.1| ferredoxin [Kytococcus sedentarius DSM 20547] Length = 107 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|50955230|ref|YP_062518.1| ferredoxin [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951712|gb|AAT89413.1| ferredoxin [Leifsonia xyli subsp. xyli str. CTCB07] Length = 106 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|19554145|ref|NP_602147.1| ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|62391799|ref|YP_227201.1| ferredoxin [Corynebacterium glutamicum ATCC 13032] gi|21325732|dbj|BAC00353.1| Ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|41327141|emb|CAF20985.1| FERREDOXIN [Corynebacterium glutamicum ATCC 13032] Length = 107 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 43/66 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELW 66 E W Sbjct: 61 VPHEWW 66 >gi|227503767|ref|ZP_03933816.1| ferredoxin [Corynebacterium striatum ATCC 6940] gi|227199591|gb|EEI79639.1| ferredoxin [Corynebacterium striatum ATCC 6940] Length = 107 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E W+ N A + ++ + Sbjct: 61 VPDE-WIDYNDANAAFFDDLGS 81 >gi|331697009|ref|YP_004333248.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326951698|gb|AEA25395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 120 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|294811298|ref|ZP_06769941.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|326439851|ref|ZP_08214585.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294323897|gb|EFG05540.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] Length = 108 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MAYVIAQPCVDVKDRACIEECPVDCIYEGPRKLYIHPDECVDCGACEPVCPVEAI 55 >gi|41410450|emb|CAE51194.1| putative ferredoxin [Thermus thermophilus] Length = 87 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P D Sbjct: 1 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIYPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKE 85 ++++ N +A PN+ +E Sbjct: 61 VPEQWRIYIEKNRTWAQTLPNVHVLEE 87 >gi|183982094|ref|YP_001850385.1| ferredoxin FdxA_1 [Mycobacterium marinum M] gi|183175420|gb|ACC40530.1| ferredoxin FdxA_1 [Mycobacterium marinum M] Length = 115 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKM 93 L L N + T+ P S AAK+ Sbjct: 61 LPQELHPHLADNVAFFTETLPGRDGPLGSPGGAAKI 96 >gi|31044101|dbj|BAA33533.3| ferredoxin [Streptomyces griseus] Length = 57 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 41/55 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAI 55 >gi|269839181|ref|YP_003323873.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269790911|gb|ACZ43051.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 83 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 4/77 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKP- 57 M YV+T CI K CVEVCPVDC Y ++ I+PDECIDCG CEPECPV AI P Sbjct: 1 MPYVITAPCIGVKDASCVEVCPVDCIYTDDDAPQYYINPDECIDCGACEPECPVSAIYPE 60 Query: 58 DTEP-GLELWLKINSEY 73 D+ P + +++IN+EY Sbjct: 61 DSVPEQWQDFIRINAEY 77 >gi|326384561|ref|ZP_08206240.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196695|gb|EGD53890.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPVDAI Sbjct: 1 MTYVIALPCVDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVDAI 55 >gi|320450822|ref|YP_004202918.1| ferredoxin-1 [Thermus scotoductus SA-01] gi|320150991|gb|ADW22369.1| ferredoxin-1 [Thermus scotoductus SA-01] Length = 90 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 4/85 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P+ Sbjct: 5 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIFPEED 64 Query: 60 --EPGLELWLKINSEYATQWPNITT 82 EP E +++ N ++A PN+ T Sbjct: 65 VPEPWRE-YIEKNRQWARTLPNVHT 88 >gi|213964508|ref|ZP_03392708.1| ferredoxin [Corynebacterium amycolatum SK46] gi|213952701|gb|EEB64083.1| ferredoxin [Corynebacterium amycolatum SK46] Length = 107 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|54026725|ref|YP_120967.1| putative ferredoxin [Nocardia farcinica IFM 10152] gi|54018233|dbj|BAD59603.1| putative ferredoxin [Nocardia farcinica IFM 10152] Length = 106 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y++ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MPYIIAEPCVDVKDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|319950850|ref|ZP_08024734.1| 7Fe ferredoxin [Dietzia cinnamea P4] gi|319435505|gb|EFV90741.1| 7Fe ferredoxin [Dietzia cinnamea P4] Length = 107 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVMDKSCVEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|38233568|ref|NP_939335.1| ferredoxin [Corynebacterium diphtheriae NCTC 13129] gi|38199828|emb|CAE49491.1| ferredoxin [Corynebacterium diphtheriae] Length = 105 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E W+ N A + ++ + Sbjct: 61 VPDE-WIDYNDANAAFFDSLGS 81 >gi|41408824|ref|NP_961660.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462225|ref|YP_882682.1| ferredoxin FdxA [Mycobacterium avium 104] gi|254775951|ref|ZP_05217467.1| putative ferredoxin FdxA [Mycobacterium avium subsp. avium ATCC 25291] gi|41397183|gb|AAS05043.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163512|gb|ABK64409.1| putative ferredoxin FdxA [Mycobacterium avium 104] Length = 118 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/96 (45%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + CI CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSE-YATQWPNITTKKESLPSAAKM 93 L+ L N +A P S AAK+ Sbjct: 61 LPEDLKPHLADNEAFFAEPLPGRDAPLGSPGGAAKL 96 >gi|72160895|ref|YP_288552.1| ferredoxin [Thermobifida fusca YX] gi|71914627|gb|AAZ54529.1| ferredoxin [Thermobifida fusca YX] Length = 106 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + K+N E+ Sbjct: 61 LPSEWSDFYKVNVEF 75 >gi|331698393|ref|YP_004334632.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953082|gb|AEA26779.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 114 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ C+ CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MAYVIGLPCVDVLDRACVDECPVDCIYEGERALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSE-YATQWPNITTKKESLPSAAKM 93 L+ + N+ +A P S AAK+ Sbjct: 61 LPESLQEYQADNARFFAEPLPGRDAPLGSPGGAAKL 96 >gi|116329640|ref|YP_799359.1| hypothetical protein LBL_4106 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332526|ref|YP_802243.1| hypothetical protein LBJ_4090 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122533|gb|ABJ80426.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116127393|gb|ABJ77485.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 99 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/89 (49%), Positives = 51/89 (57%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE C CK+T C VCPV+ F EG + L I P CIDC C PECPV+AI PD E Sbjct: 1 MAYVVTEPCRNCKYTYCAAVCPVEAFREGADCLYIEPTVCIDCNKCRPECPVEAIYPDYE 60 Query: 61 -PGL-ELWLKINSEYATQWPNITTKKESL 87 P + W+ N A +P I K L Sbjct: 61 VPSIWRDWVAENVHKAKHFPVIIDVKVPL 89 >gi|297564678|ref|YP_003683650.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849127|gb|ADH62142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 79 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/69 (53%), Positives = 44/69 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+TE CI K CVEVCPV+C Y+G + IHPDECIDCG C P CPV AI P+ + Sbjct: 1 MPHVITEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 61 PGLELWLKI 69 E I Sbjct: 61 VPAEFQSYI 69 >gi|297562832|ref|YP_003681806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847280|gb|ADH69300.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 106 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVLDKACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|295396223|ref|ZP_06806404.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294970930|gb|EFG46824.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 131 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +TY++ + C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 27 VTYIIAQPCVDLKDKACVDECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAI 81 >gi|326330916|ref|ZP_08197216.1| ferredoxin [Nocardioidaceae bacterium Broad-1] gi|325951274|gb|EGD43314.1| ferredoxin [Nocardioidaceae bacterium Broad-1] Length = 107 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CP +AI Sbjct: 1 MTYVIAQPCVDVKDKACVDECPVDCIYEGKRMLYIHPDECVDCGACEPVCPPEAI 55 >gi|331697480|ref|YP_004333719.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952169|gb|AEA25866.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 114 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ CV+VCPVDC Y+G L I+P ECI+CG CEPECPVDAI Sbjct: 1 MTYIIAEPCVDLMDRSCVDVCPVDCIYQGGRKLYINPGECIECGACEPECPVDAI 55 >gi|319441049|ref|ZP_07990205.1| hypothetical protein CvarD4_04702 [Corynebacterium variabile DSM 44702] Length = 107 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CP +AI + D Sbjct: 1 MTYVIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 E ++ N+ + + + P +G+K Sbjct: 61 LPDEWEDYIDFNTAFFDDLGDPGGAAKLGPQDFDPEGIK 99 >gi|237785229|ref|YP_002905934.1| Ferredoxin [Corynebacterium kroppenstedtii DSM 44385] gi|237758141|gb|ACR17391.1| Ferredoxin [Corynebacterium kroppenstedtii DSM 44385] Length = 105 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y + E C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MAYTIAEPCVDVKDKACVEECPVDCIYEGVRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITT 82 E W+ N A + ++ + Sbjct: 61 VPDE-WIDYNDANAAFFDDLGS 81 >gi|172040342|ref|YP_001800056.1| hypothetical protein cur_0662 [Corynebacterium urealyticum DSM 7109] gi|171851646|emb|CAQ04622.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 105 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+A+ Sbjct: 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAV 55 >gi|68536481|ref|YP_251186.1| hypothetical protein jk1395 [Corynebacterium jeikeium K411] gi|68264080|emb|CAI37568.1| fdxA [Corynebacterium jeikeium K411] Length = 105 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|260577611|ref|ZP_05845549.1| ferredoxin [Corynebacterium jeikeium ATCC 43734] gi|258604264|gb|EEW17503.1| ferredoxin [Corynebacterium jeikeium ATCC 43734] Length = 105 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|300933568|ref|ZP_07148824.1| Ferredoxin [Corynebacterium resistens DSM 45100] Length = 107 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 5/93 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 E W + N+ A + ++ + AAKM Sbjct: 61 IPDE-WEEYNAANAAFFDDLGSPG----GAAKM 88 >gi|297571981|ref|YP_003697755.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcanobacterium haemolyticum DSM 20595] gi|296932328|gb|ADH93136.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 107 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K CV+ CPVDC YEGE L IHPDEC+DCG CEP CP +AI Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGERTLYIHPDECVDCGACEPVCPTEAI 55 >gi|226304296|ref|YP_002764254.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226183411|dbj|BAH31515.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 563 Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTYVVT+ C C CV VCPV+C Y L I P+ CIDCG C CP+ Sbjct: 1 MTYVVTQPC--CNDASCVAVCPVNCIHPTPDESDYARTEMLYIDPNTCIDCGACADACPI 58 Query: 53 DAIKPDT--EPGLELWLKINSEY 73 DAI PD+ + G +L+IN++Y Sbjct: 59 DAIVPDSDLDEGDMPYLEINADY 81 >gi|152965106|ref|YP_001360890.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] gi|151359623|gb|ABS02626.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] Length = 136 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +TYV+ + C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 29 VTYVIAQPCVDVKDKACIEECPVDCIYEGNRSLYIQPDECVDCGACEPVCPVEAI 83 >gi|116669636|ref|YP_830569.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrobacter sp. FB24] gi|116609745|gb|ABK02469.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Arthrobacter sp. FB24] Length = 106 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C++ CPVDC YEGE L IHP EC+DCG C+P CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIDECPVDCIYEGERSLYIHPSECVDCGACDPVCPVEAI 55 >gi|226307668|ref|YP_002767628.1| 7Fe ferredoxin [Rhodococcus erythropolis PR4] gi|229493921|ref|ZP_04387693.1| ferredoxin [Rhodococcus erythropolis SK121] gi|226186785|dbj|BAH34889.1| 7Fe ferredoxin [Rhodococcus erythropolis PR4] gi|229319198|gb|EEN85047.1| ferredoxin [Rhodococcus erythropolis SK121] Length = 107 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|320450842|ref|YP_004202938.1| conserved domain-containing protein [Thermus scotoductus SA-01] gi|320151011|gb|ADW22389.1| conserved domain protein [Thermus scotoductus SA-01] Length = 93 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P D Sbjct: 5 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIYPEED 64 Query: 59 TEPGLELWLKINSEYATQWPNI 80 +++++ N +A PN+ Sbjct: 65 VPEQWKVYIEKNRTWAQTLPNV 86 >gi|312138850|ref|YP_004006186.1| ferredoxin [Rhodococcus equi 103S] gi|325676447|ref|ZP_08156125.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|311888189|emb|CBH47501.1| putative ferredoxin [Rhodococcus equi 103S] gi|325552625|gb|EGD22309.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 107 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|111021988|ref|YP_704960.1| ferredoxin [Rhodococcus jostii RHA1] gi|226364495|ref|YP_002782277.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|110821518|gb|ABG96802.1| ferredoxin [Rhodococcus jostii RHA1] gi|226242984|dbj|BAH53332.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 108 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|257068295|ref|YP_003154550.1| ferredoxin [Brachybacterium faecium DSM 4810] gi|256559113|gb|ACU84960.1| ferredoxin [Brachybacterium faecium DSM 4810] Length = 109 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ C+ K CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 T + K N E+ Sbjct: 61 TPDQWAEYYKANVEF 75 >gi|269219106|ref|ZP_06162960.1| ferredoxin [Actinomyces sp. oral taxon 848 str. F0332] gi|269211253|gb|EEZ77593.1| ferredoxin [Actinomyces sp. oral taxon 848 str. F0332] Length = 106 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY++ C+ CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYIIALPCVDVMDRACVDECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEY 73 ++ +N+E+ Sbjct: 61 LPEEWSVFESVNAEF 75 >gi|227494787|ref|ZP_03925103.1| possible ferredoxin [Actinomyces coleocanis DSM 15436] gi|226831239|gb|EEH63622.1| possible ferredoxin [Actinomyces coleocanis DSM 15436] Length = 107 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CV+ CPVDC YEG+ L IHP+EC+DCG CEP CP +AI Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGQRSLYIHPEECVDCGACEPVCPTEAI 55 >gi|151568126|pdb|2V2K|A Chain A, The Crystal Structure Of Fdxa, A 7fe Ferredoxin From Mycobacterium Smegmatis gi|151568127|pdb|2V2K|B Chain B, The Crystal Structure Of Fdxa, A 7fe Ferredoxin From Mycobacterium Smegmatis Length = 105 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/54 (61%), Positives = 38/54 (70%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TYV+ E C+ K C+E CPVDC YEG L IHPDEC+D G CEP CPV+AI Sbjct: 1 TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDXGACEPVCPVEAI 54 >gi|163745320|ref|ZP_02152680.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161382138|gb|EDQ06547.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 115 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++T CI K C CPVDC YEGE IHP ECI+CG+CE CPVDAI+ D E Sbjct: 1 MPLIITSACIDVKDGICTTSCPVDCIYEGERMFYIHPTECIECGMCESICPVDAIRYDDE 60 Query: 61 P-GLEL-WLKINSE 72 G E +++IN+E Sbjct: 61 ATGAEAKFVRINAE 74 >gi|119718522|ref|YP_925487.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119539183|gb|ABL83800.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 114 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E CI + CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI + D Sbjct: 1 MAYVIGEPCIDVQDRACVDECPVDCIYEGARSLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSE-YATQWPNITTKKESLPSAAKM 93 L+ + N+ +A P S AAK+ Sbjct: 61 LPAELQPYQDDNARFFAEVLPGRDRPIGSPGGAAKL 96 >gi|254822186|ref|ZP_05227187.1| ferredoxin FdxA_1 [Mycobacterium intracellulare ATCC 13950] Length = 117 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAI 55 >gi|21225392|ref|NP_631171.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|9885208|emb|CAC04216.1| ferredoxin [Streptomyces coelicolor A3(2)] Length = 129 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 10/98 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDIKDRACVTECPVDCIYEGARTLYINPAECVDCHACEPVCPVEAIFHEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 +L +N+EY + + PS A+ D V Sbjct: 61 LPRHWAHYLAVNAEY--------FDEAASPSRARRDAV 90 >gi|254774707|ref|ZP_05216223.1| ferredoxin FdxA_1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 117 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAI 55 >gi|226349641|ref|YP_002776755.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226245556|dbj|BAH55903.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 104 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/57 (56%), Positives = 38/57 (66%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M +V+ E C+ C+E CPVDC YEG L IH +ECIDCG CEP CPV AI+P Sbjct: 1 MAFVIGEPCVDVMDKSCIEECPVDCIYEGGRMLYIHQNECIDCGACEPVCPVSAIRP 57 >gi|326381449|ref|ZP_08203143.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199696|gb|EGD56876.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 108 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ E C+ CVE CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYIIAEPCVDVLDRACVEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|15807321|ref|NP_296051.1| ferredoxin [Deinococcus radiodurans R1] gi|6460141|gb|AAF11876.1|AE002064_7 ferredoxin [Deinococcus radiodurans R1] Length = 123 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C YEG IHPDECIDCG C P CPV AI P D Sbjct: 46 MPHVITSPCIGVKDQACTEVCPVECIYEGGEQFFIHPDECIDCGACVPACPVSAIFPEED 105 Query: 59 TEPGLELWLKINSEY 73 G + ++ NS + Sbjct: 106 VPDGEQDFIVKNSAH 120 >gi|283782746|ref|YP_003373500.1| putative ferredoxin 1 [Gardnerella vaginalis 409-05] gi|283442204|gb|ADB14670.1| putative ferredoxin 1 [Gardnerella vaginalis 409-05] Length = 110 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + D Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 G E + +Y + ++ ++ S Sbjct: 61 LPDGWEWYRDAAVDYFDKLGDLGGATDAGASG 92 >gi|154507672|ref|ZP_02043314.1| hypothetical protein ACTODO_00153 [Actinomyces odontolyticus ATCC 17982] gi|293189345|ref|ZP_06608068.1| ferredoxin [Actinomyces odontolyticus F0309] gi|153797306|gb|EDN79726.1| hypothetical protein ACTODO_00153 [Actinomyces odontolyticus ATCC 17982] gi|292821808|gb|EFF80744.1| ferredoxin [Actinomyces odontolyticus F0309] Length = 113 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CV+ CPVDC YEG L IHP+EC+DCG CEP CP +AI Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGARSLYIHPEECVDCGACEPVCPTEAI 55 >gi|111226128|ref|YP_716922.1| ferredoxin [Frankia alni ACN14a] gi|111153660|emb|CAJ65420.1| Ferredoxin [Frankia alni ACN14a] Length = 111 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT+VVT CI K T C+ CPVDC YEG L I+P+ECIDCG CE CPVDAI Sbjct: 1 MTFVVTSACIDVKDTACLGECPVDCIYEGVRKLYINPNECIDCGACESACPVDAI 55 >gi|297242981|ref|ZP_06926919.1| ferredoxin [Gardnerella vaginalis AMD] gi|296889192|gb|EFH27926.1| ferredoxin [Gardnerella vaginalis AMD] Length = 110 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + D Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 G E + +Y + ++ ++ S Sbjct: 61 LPEGWEWYRDAAVDYFDKLGDLGGATDAGASG 92 >gi|226366514|ref|YP_002784297.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226245004|dbj|BAH55352.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 107 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ E C+ C+E CPVDC YEG + IHPDEC+DCG CEP CPV+AI Sbjct: 1 MPYVIAEPCVDVLDKACIEECPVDCIYEGGRMMYIHPDECVDCGACEPVCPVEAI 55 >gi|290960677|ref|YP_003491859.1| ferredoxin [Streptomyces scabiei 87.22] gi|260650203|emb|CBG73319.1| ferredoxin [Streptomyces scabiei 87.22] Length = 103 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K C++ CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDRACIDECPVDCIYEGPRKLYIQPDECVDCGACEPVCPVEAI 55 >gi|108804037|ref|YP_643974.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765280|gb|ABG04162.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 87 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/57 (57%), Positives = 42/57 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+TE CI K+T CV VCPVDC Y+ + I+P+ECIDC +C P+CPV+AI P Sbjct: 1 MAYVITEACIGTKNTACVAVCPVDCIYDAGDQYVINPEECIDCSMCMPQCPVEAIYP 57 >gi|260905761|ref|ZP_05914083.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 108 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY++ + C+ K C++ CPVDC YEG L IHP+EC+DCG CEP CPV+AI Sbjct: 1 MTYIIAQPCVDLKDRACIDECPVDCIYEGSRSLYIHPEECVDCGACEPVCPVEAI 55 >gi|169628420|ref|YP_001702069.1| ferredoxin FdxC [Mycobacterium abscessus ATCC 19977] gi|169240387|emb|CAM61415.1| Probable ferredoxin FdxC [Mycobacterium abscessus] Length = 123 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +TY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 16 VTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 70 >gi|297564743|ref|YP_003683715.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849192|gb|ADH62207.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 86 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 43/69 (62%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI K C EVCPV+C Y+G + L IHPDECIDCG C P CPV AI P + Sbjct: 1 MPHVIAEPCIGVKDRSCQEVCPVECIYDGGDQLYIHPDECIDCGACVPACPVSAIYPQED 60 Query: 61 PGLELWLKI 69 E + I Sbjct: 61 LPAEWYSYI 69 >gi|262203210|ref|YP_003274418.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086557|gb|ACY22525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 108 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY++ E C+ CVE CPVDC YEG L I PDEC+DCG CEP CPV+AI + D Sbjct: 1 MTYIIAEPCVDVMDKACVEECPVDCIYEGGRALYIQPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 E ++ N+++ Sbjct: 61 VPDEWEPYVSANADF 75 >gi|328949904|ref|YP_004367239.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328450228|gb|AEB11129.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 79 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 41/60 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+TE CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P+ + Sbjct: 1 MPHVITEPCIGVKDQSCTEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 >gi|257067244|ref|YP_003153499.1| ferredoxin [Brachybacterium faecium DSM 4810] gi|256558062|gb|ACU83909.1| ferredoxin [Brachybacterium faecium DSM 4810] Length = 109 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|291294431|ref|YP_003505829.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus ruber DSM 1279] gi|290469390|gb|ADD26809.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus ruber DSM 1279] Length = 79 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 41/60 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI K CVEVCPV+C Y+G + IHPDECIDCG C P CPV AI P+ + Sbjct: 1 MPHVIVEPCIGTKDKSCVEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 >gi|29828838|ref|NP_823472.1| ferredoxin [Streptomyces avermitilis MA-4680] gi|29605943|dbj|BAC70007.1| putative ferredoxin [Streptomyces avermitilis MA-4680] Length = 108 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 37/55 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K CV CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIALPCVDVKDRSCVGECPVDCIYEGRRALYIQPDECVDCGACEPVCPVEAI 55 >gi|298253085|ref|ZP_06976877.1| ferredoxin [Gardnerella vaginalis 5-1] gi|297532480|gb|EFH71366.1| ferredoxin [Gardnerella vaginalis 5-1] Length = 110 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAI 55 >gi|119960623|ref|YP_946862.1| ferredoxin [Arthrobacter aurescens TC1] gi|119947482|gb|ABM06393.1| ferredoxin [Arthrobacter aurescens TC1] Length = 106 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 40/55 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M+YV+ + C+ K C++ CPVDC YEG+ L IHP EC+DCG C+P CPV+AI Sbjct: 1 MSYVIAQPCVDVKDRACIQECPVDCIYEGDRSLYIHPSECVDCGACDPVCPVEAI 55 >gi|116255229|ref|YP_771062.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] gi|115259877|emb|CAK02971.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] Length = 108 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 38/60 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T+ CI K DC CPVDC YEG IHP ECI+CG+C CPVDAI D E Sbjct: 1 MAYVITDPCIDVKDGDCTVACPVDCIYEGGRMFYIHPGECINCGLCLSVCPVDAISWDEE 60 >gi|94984884|ref|YP_604248.1| 4Fe-4S ferredoxin, iron-sulfur binding [Deinococcus geothermalis DSM 11300] gi|94555165|gb|ABF45079.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Deinococcus geothermalis DSM 11300] Length = 78 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEY 73 G E ++ N + Sbjct: 61 VPAGEEEFIFKNRAF 75 >gi|118618608|ref|YP_906940.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] gi|118570718|gb|ABL05469.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] Length = 115 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/55 (61%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + CI CVE CPVDC YEG L IHPDE +DCG CEP CPV+AI Sbjct: 1 MTYVIGKPCIDVTDRACVEECPVDCIYEGGRSLYIHPDEFVDCGACEPVCPVEAI 55 >gi|324997878|ref|ZP_08118990.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia sp. P1] Length = 104 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YVVTE CI + C+E CPVDC Y G+ + IHPDEC+DCG C P CP +AI Sbjct: 1 MAYVVTEACIDVQDRACMEECPVDCIYPGDRMMYIHPDECVDCGKCMPACPSEAI 55 >gi|326772206|ref|ZP_08231491.1| ferredoxin [Actinomyces viscosus C505] gi|326638339|gb|EGE39240.1| ferredoxin [Actinomyces viscosus C505] Length = 116 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 8/98 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI + D Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 E + + N ++ K P A+ GV Sbjct: 61 VPEEWEDYTRANIDF------FELKGLGSPGGAQRTGV 92 >gi|227497862|ref|ZP_03928046.1| possible ferredoxin [Actinomyces urogenitalis DSM 15434] gi|226832711|gb|EEH65094.1| possible ferredoxin [Actinomyces urogenitalis DSM 15434] Length = 117 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAI 55 >gi|170782509|ref|YP_001710842.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] gi|169157078|emb|CAQ02253.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] Length = 108 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT V+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTCVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAI 55 >gi|320531785|ref|ZP_08032710.1| putative ferredoxin [Actinomyces sp. oral taxon 171 str. F0337] gi|325067472|ref|ZP_08126145.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Actinomyces oris K20] gi|329944142|ref|ZP_08292401.1| ferredoxin [Actinomyces sp. oral taxon 170 str. F0386] gi|320135997|gb|EFW28020.1| putative ferredoxin [Actinomyces sp. oral taxon 171 str. F0337] gi|328530872|gb|EGF57728.1| ferredoxin [Actinomyces sp. oral taxon 170 str. F0386] Length = 116 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAI 55 >gi|114776699|ref|ZP_01451742.1| Ferredoxin [Mariprofundus ferrooxydans PV-1] gi|114552785|gb|EAU55216.1| Ferredoxin [Mariprofundus ferrooxydans PV-1] Length = 114 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 59/112 (52%), Gaps = 12/112 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD 53 M +VVT+ C C T CV VCPVDCFY E N L I P+ECIDC VCEPECP + Sbjct: 1 MAFVVTQLCKDCVDTACVAVCPVDCFYQPKDISAETPNMLYISPEECIDCAVCEPECPWE 60 Query: 54 AIKP--DTEPGLELWLKINSEYATQ---WPNITTKKESLPSAAKMDGVKQKY 100 AI P D E + +N T+ + K + PSA ++ K KY Sbjct: 61 AIYPEEDVPDVFEDDIALNELSDTERDLFELAEVKDHTPPSADEVAANKAKY 112 >gi|256783588|ref|ZP_05522019.1| ferredoxin [Streptomyces lividans TK24] gi|289767469|ref|ZP_06526847.1| ferredoxin [Streptomyces lividans TK24] gi|289697668|gb|EFD65097.1| ferredoxin [Streptomyces lividans TK24] Length = 129 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + D Sbjct: 1 MTYVIAQPCVDIKDRACVTECPVDCIYEGARTLYINPAECVDCHACEPVCPVEAIFHEDD 60 Query: 59 TEPGLELWLKINSEY 73 +L +N+EY Sbjct: 61 LPRHWAHYLAVNAEY 75 >gi|119714883|ref|YP_921848.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119535544|gb|ABL80161.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 544 Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MT+V+T++C C+ CV VCPV C +E L I P CIDCG C CPV Sbjct: 1 MTFVITQSC--CEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 DAI P P L + +N+EY P Sbjct: 59 DAIYPGDALPPSLSTFSAVNAEYFEARP 86 >gi|296138878|ref|YP_003646121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] gi|296027012|gb|ADG77782.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 108 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 37/55 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY + E C+ C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI Sbjct: 1 MTYTIAEPCVDVLDKACIEECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAI 55 >gi|111022909|ref|YP_705881.1| ferredoxin [Rhodococcus jostii RHA1] gi|226365417|ref|YP_002783200.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|110822439|gb|ABG97723.1| possible ferredoxin [Rhodococcus jostii RHA1] gi|226243907|dbj|BAH54255.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 107 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 37/55 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MPYTIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAI 55 >gi|317506365|ref|ZP_07964176.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255328|gb|EFV14587.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 112 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV E C+ C+E CPVDC Y G + I+PD CIDCG CEP CPV+AI + D Sbjct: 1 MAFVVAEPCVDVLDRSCLEECPVDCMYTGNRMVYINPDLCIDCGACEPVCPVEAIYFEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNI 80 G + + N+E+ P + Sbjct: 61 VPEGWSAFRQANAEFFKDIPGL 82 >gi|226357256|ref|YP_002786996.1| ferredoxin [Deinococcus deserti VCD115] gi|226319246|gb|ACO47242.1| putative ferredoxin [Deinococcus deserti VCD115] Length = 78 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ CI K C EVCPV+C Y+ IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVIVSPCIGTKDQACTEVCPVECIYDAGEMFLIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEY 73 G E ++ N E+ Sbjct: 61 VPAGEESFIARNREH 75 >gi|312141637|ref|YP_004008973.1| ferredoxin [Rhodococcus equi 103S] gi|325673105|ref|ZP_08152799.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|311890976|emb|CBH50295.1| ferredoxin [Rhodococcus equi 103S] gi|325556358|gb|EGD26026.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 106 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 50/96 (52%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI C+E CPVDC YEGE L I+P+ECIDCG CE CPV+AI D + Sbjct: 1 MAFVIGEACIDYMDRSCMEECPVDCIYEGERKLYINPNECIDCGACELACPVEAITVDRK 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 E + P + AAK+D + Sbjct: 61 ADPEFKEDAKRFFLEILPTRAEPVGNPGGAAKIDVI 96 >gi|94986311|ref|YP_605675.1| 4Fe-4S ferredoxin, iron-sulfur binding [Deinococcus geothermalis DSM 11300] gi|94556592|gb|ABF46506.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Deinococcus geothermalis DSM 11300] Length = 78 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEY 73 G E + N + Sbjct: 61 VPAGEEEFTLKNRAF 75 >gi|218288758|ref|ZP_03493021.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241116|gb|EED08292.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 80 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 8/78 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----- 55 MTYV+T CI K DCVEVCPVD ++G I P+ CIDCG CEP CPV AI Sbjct: 2 MTYVITSPCIGEKAADCVEVCPVDAIHDGGATYLIDPERCIDCGACEPVCPVSAIFHEAS 61 Query: 56 KPDTEPGLELWLKINSEY 73 PD E W++IN + Sbjct: 62 VPDDE---RHWIEINRAF 76 >gi|226364584|ref|YP_002782366.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226243073|dbj|BAH53421.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 559 Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEKPFATTEMLYIDPDTCIDCGACVEECPV 58 Query: 53 DAI--KPDTEPGLELWLKINSEYATQWP 78 +AI + D + E +L IN++Y T+ P Sbjct: 59 EAIYAENDLDEVDEPYLDINAQYYTKHP 86 >gi|254449213|ref|ZP_05062662.1| ferredoxin, 4Fe-4S [gamma proteobacterium HTCC5015] gi|198261190|gb|EDY85486.1| ferredoxin, 4Fe-4S [gamma proteobacterium HTCC5015] Length = 85 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNI 80 +DCF+EG NFL I PD CIDC +C P CP +AI PD E G + +N+E + WP + Sbjct: 1 MDCFHEGPNFLVIDPDACIDCSLCVPACPAEAIYPDDELPEGQAHFTALNAELSKLWPVL 60 Query: 81 TTKKESLPSAAKMDGVKQKY 100 K LP A DG K Sbjct: 61 DEPKAPLPDADDWDGEPDKL 80 >gi|311900686|dbj|BAJ33094.1| putative 7Fe ferredoxin [Kitasatospora setae KM-6054] Length = 104 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYVV C+ K C E CPVD YEG L IHPDECIDCG CE CPV+AI + D Sbjct: 1 MTYVVALPCVDVKDRACTEECPVDGIYEGPRMLYIHPDECIDCGACEVVCPVEAIHYEDD 60 Query: 59 TEPGLELWLKINSEYATQW 77 L + N+E+ + Sbjct: 61 LPAELRPFAAANAEFCAEL 79 >gi|325284128|ref|YP_004256669.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] gi|324315937|gb|ADY27052.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] Length = 78 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 41/60 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV+AI P+ + Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFLIHPDECIDCGACVPACPVNAIFPEED 60 >gi|111220922|ref|YP_711716.1| ferredoxin [Frankia alni ACN14a] gi|111148454|emb|CAJ60125.1| Ferredoxin (partial match) [Frankia alni ACN14a] Length = 140 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T C+ CV+ CPVDC YEG L IHP+ECIDCG C CPVDAI + + Sbjct: 1 MVYVITAACLDVTDRSCVDECPVDCVYEGRRKLYIHPEECIDCGACARVCPVDAIVWERD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESL--PSAAKMDG 95 + + +A + ++ + + + P A M G Sbjct: 61 LDGDGHAHLGDAHAFFYRPLSGRPKPIGAPGGAGMLG 97 >gi|46200111|ref|YP_005778.1| ferredoxin [Thermus thermophilus HB27] gi|55980146|ref|YP_143443.1| ferredoxin [Thermus thermophilus HB8] gi|62288089|sp|P03942|FER_THET8 RecName: Full=Ferredoxin gi|46197739|gb|AAS82151.1| ferredoxin [Thermus thermophilus HB27] gi|55771559|dbj|BAD70000.1| ferredoxin [Thermus thermophilus HB8] Length = 79 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 42/60 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P+ + Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIYPEED 60 >gi|111022079|ref|YP_705051.1| ferredoxin--NADP(+) reductase, C-terminal [Rhodococcus jostii RHA1] gi|110821609|gb|ABG96893.1| possible ferredoxin--NADP(+) reductase, C-terminal [Rhodococcus jostii RHA1] Length = 559 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEKPFATTEMLYIDPDTCIDCGACVEECPV 58 Query: 53 DAI--KPDTEPGLELWLKINSEYATQWP 78 +AI + D + E +L IN++Y T+ P Sbjct: 59 EAIYAENDLDEVDEPYLDINAQYYTKHP 86 >gi|118592808|ref|ZP_01550197.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stappia aggregata IAM 12614] gi|118434578|gb|EAV41230.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stappia aggregata IAM 12614] Length = 115 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/60 (53%), Positives = 38/60 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++ CI K C CPVDC YEGE IHP+ECI+CG+CE CPVDAI+ D E Sbjct: 1 MALIIKSECIDVKDGICTTSCPVDCIYEGERMFYIHPEECIECGMCESICPVDAIRYDDE 60 >gi|28493542|ref|NP_787703.1| ferredoxin [Tropheryma whipplei str. Twist] gi|28572347|ref|NP_789127.1| ferredoxin [Tropheryma whipplei TW08/27] gi|28410478|emb|CAD66864.1| ferredoxin [Tropheryma whipplei TW08/27] gi|28476584|gb|AAO44672.1| ferredoxin [Tropheryma whipplei str. Twist] Length = 108 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ K C++ CPVDC YEG L I+PDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAFPCVDLKDRACIDECPVDCIYEGGRSLYINPDECVDCGACEPVCPVEAI 55 >gi|183601928|ref|ZP_02963297.1| ferredoxin [Bifidobacterium animalis subsp. lactis HN019] gi|219682842|ref|YP_002469225.1| ferredoxin [Bifidobacterium animalis subsp. lactis AD011] gi|241190418|ref|YP_002967812.1| ferredoxin [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195824|ref|YP_002969379.1| ferredoxin [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218813|gb|EDT89455.1| ferredoxin [Bifidobacterium animalis subsp. lactis HN019] gi|219620492|gb|ACL28649.1| ferredoxin [Bifidobacterium animalis subsp. lactis AD011] gi|240248810|gb|ACS45750.1| ferredoxin [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250378|gb|ACS47317.1| ferredoxin [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178141|gb|ADC85387.1| Ferredoxin [Bifidobacterium animalis subsp. lactis BB-12] gi|295793405|gb|ADG32940.1| ferredoxin [Bifidobacterium animalis subsp. lactis V9] Length = 107 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YV+ + C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CP +AI + D Sbjct: 1 MAYVIAQPCVDVKDKACVDECPVDCIYEGKRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLP 88 P E + E+ + ++ + + P Sbjct: 61 LPPEWEWYKDAAVEFFAEVGDLGGAQAAGP 90 >gi|320449419|ref|YP_004201515.1| ferredoxin-1 [Thermus scotoductus SA-01] gi|320149588|gb|ADW20966.1| ferredoxin-1 [Thermus scotoductus SA-01] Length = 79 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 42/60 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P+ + Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIFPEED 60 >gi|3334183|sp|Q45560|FER_BACSC RecName: Full=Ferredoxin 7Fe; AltName: Full=Seven-iron ferredoxin gi|474962|dbj|BAA06187.1| ferredoxin [Bacillus schlegelii] Length = 78 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/55 (63%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI Sbjct: 1 MAYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAI 55 >gi|218294618|ref|ZP_03495472.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] gi|218244526|gb|EED11050.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] Length = 79 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 42/60 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P+ + Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIFPEED 60 >gi|320335830|ref|YP_004172541.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757119|gb|ADV68876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 78 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P+ + Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIFPEED 60 Query: 61 -PGLEL 65 PG ++ Sbjct: 61 VPGDQV 66 >gi|297153736|gb|ADI03448.1| ferredoxin [Streptomyces bingchenggensis BCW-1] Length = 127 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + CI K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + D Sbjct: 1 MTYVIAQPCIDIKDRACVIECPVDCIYEGNRTLYINPAECVDCHACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 + IN+EY Sbjct: 61 LPQQWAQYKAINAEY 75 >gi|89056240|ref|YP_511691.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88865789|gb|ABD56666.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 116 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/60 (53%), Positives = 37/60 (61%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V+ C+ K C CPVDC YEGE IHP ECI+CG+CE CPVDAI+ D E Sbjct: 1 MALVILSACVDVKDGICTTSCPVDCIYEGERMFYIHPTECIECGMCESICPVDAIRYDDE 60 >gi|294790482|ref|ZP_06755640.1| ferredoxin [Scardovia inopinata F0304] gi|294458379|gb|EFG26732.1| ferredoxin [Scardovia inopinata F0304] Length = 111 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ E C+ K CVE CPVDC YEG L I+P+EC+DCG CEP CP +AI D Sbjct: 1 MAYVIAEPCVDVKDKACVEECPVDCIYEGPRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 60 EPGLELWLK 68 P W K Sbjct: 61 LPDDWAWYK 69 >gi|298346081|ref|YP_003718768.1| putative ferredoxin [Mobiluncus curtisii ATCC 43063] gi|304390160|ref|ZP_07372114.1| ferredoxin [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654663|ref|ZP_07907569.1| ferredoxin [Mobiluncus curtisii ATCC 51333] gi|315657420|ref|ZP_07910302.1| ferredoxin [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236142|gb|ADI67274.1| possible ferredoxin [Mobiluncus curtisii ATCC 43063] gi|304326642|gb|EFL93886.1| ferredoxin [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491127|gb|EFU80746.1| ferredoxin [Mobiluncus curtisii ATCC 51333] gi|315491892|gb|EFU81501.1| ferredoxin [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 107 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV+ CPVDC YEGE L I+P EC+DCG CEP CP AI + D Sbjct: 1 MTYVIAQPCVDVKDKACVDECPVDCIYEGERTLYINPLECVDCGACEPVCPPQAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESL 87 +L+ ++ + N T S+ Sbjct: 61 LPEPWTDFLRAGRDFFADFDNPTPGGASV 89 >gi|226308457|ref|YP_002768417.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226187574|dbj|BAH35678.1| probable ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 560 Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEAPFATTEMLYIDPDTCIDCGACVDECPV 58 Query: 53 DAIKPDTEPGLE--LWLKINSEYATQWP 78 +AI PD E + +L++N+ Y + P Sbjct: 59 EAIFPDNELDEDDAPYLQMNASYFEKHP 86 >gi|298242651|ref|ZP_06966458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297555705|gb|EFH89569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 87 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 10/86 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ CI + CV+VCPVDC YE L I+PDECIDCG CEP CPV Sbjct: 1 MAYVITQPCIGVRDASCVDVCPVDCIHPSSNEPGYEEAEQLFINPDECIDCGACEPACPV 60 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQ 76 AI ++ E ++KIN+E+ + Sbjct: 61 TAIFEESAVPDEWKSYIKINAEFFNR 86 >gi|325675367|ref|ZP_08155051.1| ferredoxin-NADP reductase [Rhodococcus equi ATCC 33707] gi|325553338|gb|EGD23016.1| ferredoxin-NADP reductase [Rhodococcus equi ATCC 33707] Length = 564 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGE----NFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + E E L I P CIDCG C CPV Sbjct: 1 MAYVITQTC--CNDASCVSACPVNCIHPTPEEAEFATTEMLYIEPQACIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI P+ + L+ + +IN++Y T+ P Sbjct: 59 NAIFPEDQLSESLQRYREINADYYTRHP 86 >gi|262203739|ref|YP_003274947.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087086|gb|ACY23054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 559 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGENFLA----IHPDECIDCGVCEPECPV 52 M +V+T C C CV VCPV+C + E E F A I P+ CIDCG C ECPV Sbjct: 1 MAHVITRPC--CNDASCVAVCPVNCIHPTPDEPEFFTAESLYIDPETCIDCGACIDECPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEY 73 +AI PD E E +L+IN++Y Sbjct: 59 EAIIPDDSLEERDEPYLQINADY 81 >gi|154486719|ref|ZP_02028126.1| hypothetical protein BIFADO_00543 [Bifidobacterium adolescentis L2-32] gi|154084582|gb|EDN83627.1| hypothetical protein BIFADO_00543 [Bifidobacterium adolescentis L2-32] Length = 106 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YVV + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|119025314|ref|YP_909159.1| ferredoxin [Bifidobacterium adolescentis ATCC 15703] gi|212716645|ref|ZP_03324773.1| hypothetical protein BIFCAT_01575 [Bifidobacterium catenulatum DSM 16992] gi|225351077|ref|ZP_03742100.1| hypothetical protein BIFPSEUDO_02660 [Bifidobacterium pseudocatenulatum DSM 20438] gi|118764898|dbj|BAF39077.1| ferredoxin [Bifidobacterium adolescentis ATCC 15703] gi|212660349|gb|EEB20924.1| hypothetical protein BIFCAT_01575 [Bifidobacterium catenulatum DSM 16992] gi|225158533|gb|EEG71775.1| hypothetical protein BIFPSEUDO_02660 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 106 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YVV + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|298248993|ref|ZP_06972797.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|298250987|ref|ZP_06974791.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297546997|gb|EFH80864.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297548991|gb|EFH82858.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 86 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 10/83 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTYV+T+ C+ K CV+VCPVDC +E L I+PDECIDCG CEP CPV Sbjct: 1 MTYVITQPCVGVKDASCVDVCPVDCIHPTQSEAGFESSEQLYINPDECIDCGACEPVCPV 60 Query: 53 DAIKPDTEPGLEL--WLKINSEY 73 AI ++ E ++KIN+++ Sbjct: 61 TAIFEESAVPEEWNQYIKINADF 83 >gi|313902219|ref|ZP_07835626.1| ferredoxin [Thermaerobacter subterraneus DSM 13965] gi|313467499|gb|EFR63006.1| ferredoxin [Thermaerobacter subterraneus DSM 13965] Length = 82 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 39/60 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K CVEVCPVDC YEGE+ IHP+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGTKDQSCVEVCPVDCIYEGEDQFFIHPEECIGCSACAAVCPVEAIYDEDE 60 >gi|121599359|ref|YP_993807.1| ferredoxin [Burkholderia mallei SAVP1] gi|226197927|ref|ZP_03793501.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|121228169|gb|ABM50687.1| ferredoxin [Burkholderia mallei SAVP1] gi|225930115|gb|EEH26128.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] Length = 85 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE-PG-LELWLKINSEYATQWPNI 80 +DCF EG NFLAI PDECIDC VC ECP +AI + + PG + + +N+E A WP+I Sbjct: 1 MDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEEDVPGDQQHFTALNAELAKDWPSI 60 Query: 81 TTKKESLPSAAKMDGVKQK 99 T K + A + V++K Sbjct: 61 TKTKPAPADADEWKDVQEK 79 >gi|312140996|ref|YP_004008332.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|311890335|emb|CBH49653.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] Length = 578 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGE----NFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + E E L I P CIDCG C CPV Sbjct: 15 MAYVITQTC--CNDASCVSACPVNCIHPTPEEAEFATTEMLYIEPQACIDCGACVDACPV 72 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI P+ + L+ + +IN++Y T+ P Sbjct: 73 NAIFPEDQLSESLQRYREINADYYTRHP 100 >gi|261338294|ref|ZP_05966178.1| ferredoxin [Bifidobacterium gallicum DSM 20093] gi|270276957|gb|EFA22811.1| ferredoxin [Bifidobacterium gallicum DSM 20093] Length = 107 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI D Sbjct: 1 MAYVIAQPCVDVKDKACVDECPVDCIYEGVRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 P W K + A Q+ + K +A D Sbjct: 61 LPEEWAWYK---DAAVQFFDEVGDKGGASAAGPFD 92 >gi|17942775|pdb|1H98|A Chain A, New Insights Into Thermostability Of Bacterial Ferredoxins: High Resolution Crystal Structure Of The Seven-Iron Ferredoxin From Thermus Thermophilus Length = 78 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/58 (55%), Positives = 41/58 (70%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P+ + Sbjct: 2 HVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIYPEED 59 >gi|229818391|ref|ZP_04448672.1| hypothetical protein BIFANG_03696 [Bifidobacterium angulatum DSM 20098] gi|229784261|gb|EEP20375.1| hypothetical protein BIFANG_03696 [Bifidobacterium angulatum DSM 20098] Length = 111 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 7 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 61 >gi|171741293|ref|ZP_02917100.1| hypothetical protein BIFDEN_00369 [Bifidobacterium dentium ATCC 27678] gi|283455347|ref|YP_003359911.1| fdxC Ferredoxin [Bifidobacterium dentium Bd1] gi|306823586|ref|ZP_07456961.1| ferredoxin [Bifidobacterium dentium ATCC 27679] gi|309803019|ref|ZP_07697120.1| ferredoxin [Bifidobacterium dentium JCVIHMP022] gi|171276907|gb|EDT44568.1| hypothetical protein BIFDEN_00369 [Bifidobacterium dentium ATCC 27678] gi|283101981|gb|ADB09087.1| fdxC Ferredoxin [Bifidobacterium dentium Bd1] gi|304553293|gb|EFM41205.1| ferredoxin [Bifidobacterium dentium ATCC 27679] gi|308220486|gb|EFO76797.1| ferredoxin [Bifidobacterium dentium JCVIHMP022] Length = 106 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|312200512|ref|YP_004020573.1| ferredoxin [Frankia sp. EuI1c] gi|311231848|gb|ADP84703.1| ferredoxin [Frankia sp. EuI1c] Length = 117 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/60 (51%), Positives = 36/60 (60%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ C+ CVE CP+DC Y G L IHP+ECIDCG C CPVDAI D + Sbjct: 1 MAYVIGAACVDIMDQSCVEDCPIDCIYTGARKLYIHPEECIDCGACARSCPVDAISWDRD 60 >gi|291457166|ref|ZP_06596556.1| ferredoxin [Bifidobacterium breve DSM 20213] gi|291381001|gb|EFE88519.1| ferredoxin [Bifidobacterium breve DSM 20213] Length = 106 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|23466115|ref|NP_696718.1| ferredoxin [Bifidobacterium longum NCC2705] gi|189440546|ref|YP_001955627.1| Ferredoxin [Bifidobacterium longum DJO10A] gi|227546453|ref|ZP_03976502.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620993|ref|ZP_04664024.1| ferredoxin [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454888|ref|YP_003662032.1| 4Fe-4S ferredoxin, iron-sulfur-binding domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|312133853|ref|YP_004001192.1| ferredoxin [Bifidobacterium longum subsp. longum BBMN68] gi|317483015|ref|ZP_07942017.1| 4Fe-4S binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322689945|ref|YP_004209679.1| ferredoxin [Bifidobacterium longum subsp. infantis 157F] gi|322691886|ref|YP_004221456.1| ferredoxin [Bifidobacterium longum subsp. longum JCM 1217] gi|23326849|gb|AAN25354.1| ferredoxin [Bifidobacterium longum NCC2705] gi|189428981|gb|ACD99129.1| Ferredoxin [Bifidobacterium longum DJO10A] gi|227213110|gb|EEI80989.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516094|gb|EEQ55961.1| ferredoxin [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296184320|gb|ADH01202.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. longum JDM301] gi|311773144|gb|ADQ02632.1| Ferredoxin [Bifidobacterium longum subsp. longum BBMN68] gi|316915516|gb|EFV36936.1| 4Fe-4S binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320456742|dbj|BAJ67364.1| ferredoxin [Bifidobacterium longum subsp. longum JCM 1217] gi|320461281|dbj|BAJ71901.1| ferredoxin [Bifidobacterium longum subsp. infantis 157F] Length = 106 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|213693103|ref|YP_002323689.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524564|gb|ACJ53311.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459280|dbj|BAJ69901.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 106 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|15609144|ref|NP_216523.1| ferredoxin FDXA [Mycobacterium tuberculosis H37Rv] gi|15841489|ref|NP_336526.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31793187|ref|NP_855680.1| ferredoxin FDXA [Mycobacterium bovis AF2122/97] gi|121637891|ref|YP_978114.1| putative ferredoxin fdxA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661821|ref|YP_001283344.1| ferredoxin FdxA [Mycobacterium tuberculosis H37Ra] gi|148823222|ref|YP_001287976.1| ferredoxin fdxA [Mycobacterium tuberculosis F11] gi|167970464|ref|ZP_02552741.1| ferredoxin fdxA [Mycobacterium tuberculosis H37Ra] gi|215404186|ref|ZP_03416367.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|215411702|ref|ZP_03420498.1| ferredoxin fdxA [Mycobacterium tuberculosis 94_M4241A] gi|215427368|ref|ZP_03425287.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|215430929|ref|ZP_03428848.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|215446220|ref|ZP_03432972.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|218753724|ref|ZP_03532520.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|219557969|ref|ZP_03537045.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|224990385|ref|YP_002645072.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253798941|ref|YP_003031942.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 1435] gi|254232177|ref|ZP_04925504.1| ferredoxin fdxA [Mycobacterium tuberculosis C] gi|254364826|ref|ZP_04980872.1| ferredoxin fdxA [Mycobacterium tuberculosis str. Haarlem] gi|254551030|ref|ZP_05141477.1| ferredoxin fdxA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186982|ref|ZP_05764456.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|260201110|ref|ZP_05768601.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|260205290|ref|ZP_05772781.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289443498|ref|ZP_06433242.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|289447624|ref|ZP_06437368.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|289554213|ref|ZP_06443423.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 605] gi|289570107|ref|ZP_06450334.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|289574683|ref|ZP_06454910.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289746045|ref|ZP_06505423.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|289750589|ref|ZP_06509967.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|289754113|ref|ZP_06513491.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|289758123|ref|ZP_06517501.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|289762161|ref|ZP_06521539.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|294996943|ref|ZP_06802634.1| ferredoxin fdxA [Mycobacterium tuberculosis 210] gi|297634582|ref|ZP_06952362.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 4207] gi|297731570|ref|ZP_06960688.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN R506] gi|298525509|ref|ZP_07012918.1| ferredoxin [Mycobacterium tuberculosis 94_M4241A] gi|306776244|ref|ZP_07414581.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu001] gi|306780027|ref|ZP_07418364.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu002] gi|306784775|ref|ZP_07423097.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu003] gi|306789133|ref|ZP_07427455.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu004] gi|306793467|ref|ZP_07431769.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu005] gi|306797851|ref|ZP_07436153.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu006] gi|306803731|ref|ZP_07440399.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu008] gi|306808305|ref|ZP_07444973.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu007] gi|306968129|ref|ZP_07480790.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu009] gi|306972354|ref|ZP_07485015.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu010] gi|307080063|ref|ZP_07489233.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu011] gi|307084638|ref|ZP_07493751.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu012] gi|313658903|ref|ZP_07815783.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN V2475] gi|54037088|sp|P64123|FER_MYCBO RecName: Full=Ferredoxin gi|54040765|sp|P64122|FER_MYCTU RecName: Full=Ferredoxin gi|1403446|emb|CAA98408.1| PROBABLE FERREDOXIN FDXA [Mycobacterium tuberculosis H37Rv] gi|13881731|gb|AAK46340.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31618779|emb|CAD96883.1| PROBABLE FERREDOXIN FDXA [Mycobacterium bovis AF2122/97] gi|121493538|emb|CAL72012.1| Probable ferredoxin fdxA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601236|gb|EAY60246.1| ferredoxin fdxA [Mycobacterium tuberculosis C] gi|134150340|gb|EBA42385.1| ferredoxin fdxA [Mycobacterium tuberculosis str. Haarlem] gi|148505973|gb|ABQ73782.1| ferredoxin FdxA [Mycobacterium tuberculosis H37Ra] gi|148721749|gb|ABR06374.1| ferredoxin fdxA [Mycobacterium tuberculosis F11] gi|224773498|dbj|BAH26304.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253320444|gb|ACT25047.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 1435] gi|289416417|gb|EFD13657.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|289420582|gb|EFD17783.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|289438845|gb|EFD21338.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 605] gi|289539114|gb|EFD43692.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289543861|gb|EFD47509.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|289686573|gb|EFD54061.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|289691176|gb|EFD58605.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|289694700|gb|EFD62129.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|289709667|gb|EFD73683.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|289713687|gb|EFD77699.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|298495303|gb|EFI30597.1| ferredoxin [Mycobacterium tuberculosis 94_M4241A] gi|308215355|gb|EFO74754.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu001] gi|308327065|gb|EFP15916.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu002] gi|308330506|gb|EFP19357.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu003] gi|308334341|gb|EFP23192.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu004] gi|308338142|gb|EFP26993.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu005] gi|308341834|gb|EFP30685.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu006] gi|308345322|gb|EFP34173.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu007] gi|308349624|gb|EFP38475.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu008] gi|308354253|gb|EFP43104.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu009] gi|308358230|gb|EFP47081.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu010] gi|308362161|gb|EFP51012.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu011] gi|308365815|gb|EFP54666.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu012] gi|323719499|gb|EGB28626.1| ferredoxin fdxA [Mycobacterium tuberculosis CDC1551A] gi|326903619|gb|EGE50552.1| ferredoxin fdxA [Mycobacterium tuberculosis W-148] gi|328458696|gb|AEB04119.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 4207] Length = 114 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 37/55 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ CV+ CPVDC YEG L I+PDEC+DCG C+P C V+AI Sbjct: 1 MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAI 55 >gi|315226089|ref|ZP_07867877.1| ferredoxin [Parascardovia denticolens DSM 10105] gi|315120221|gb|EFT83353.1| ferredoxin [Parascardovia denticolens DSM 10105] Length = 119 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ E C+ K CV+ CPVDC YE L I+P+EC+DCG CEP CP +AI D Sbjct: 12 MAYVIAEPCVDVKDKACVDECPVDCIYEAPRTLYINPNECVDCGACEPVCPTEAIFYEDD 71 Query: 60 EPGLELWLKINSE 72 P +W K +E Sbjct: 72 LPDEWVWYKDAAE 84 >gi|317122522|ref|YP_004102525.1| ferredoxin [Thermaerobacter marianensis DSM 12885] gi|315592502|gb|ADU51798.1| ferredoxin [Thermaerobacter marianensis DSM 12885] Length = 82 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 39/60 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K CVEVCPVDC YEGE+ IHP+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCVGTKDQSCVEVCPVDCIYEGEDQFFIHPEECIGCSACAAVCPVEAIYDEDE 60 >gi|269837836|ref|YP_003320064.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787099|gb|ACZ39242.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 80 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 6/78 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI-- 55 MTYV+ + CI K CVEVCPVDC + E E + I+PDECIDCGVC CPV+AI Sbjct: 1 MTYVIAQPCIGLKDASCVEVCPVDCIHSDDEAEQYF-INPDECIDCGVCAEVCPVEAIFF 59 Query: 56 KPDTEPGLELWLKINSEY 73 + D +L+IN EY Sbjct: 60 EDDLPEQWADFLRINREY 77 >gi|167461806|ref|ZP_02326895.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 150 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T CI K DCV VCPVDC +EGE+ I PD CI+CG CE ECPV AI Sbjct: 74 MAFVITSPCIGEKAADCVSVCPVDCIHEGEDQYYIDPDVCIECGACEVECPVTAI 128 >gi|310288040|ref|YP_003939299.1| Ferredoxin [Bifidobacterium bifidum S17] gi|309251977|gb|ADO53725.1| Ferredoxin [Bifidobacterium bifidum S17] Length = 107 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 55 >gi|294786512|ref|ZP_06751766.1| ferredoxin [Parascardovia denticolens F0305] gi|294485345|gb|EFG32979.1| ferredoxin [Parascardovia denticolens F0305] Length = 108 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ E C+ K CV+ CPVDC YE L I+P+EC+DCG CEP CP +AI D Sbjct: 1 MAYVIAEPCVDVKDKACVDECPVDCIYEAPRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 60 EPGLELWLKINSE 72 P +W K +E Sbjct: 61 LPDEWVWYKDAAE 73 >gi|157830220|pdb|1BC6|A Chain A, 7-Fe Ferredoxin From Bacillus Schlegelii, Nmr, 20 Structures Length = 77 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/54 (62%), Positives = 37/54 (68%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI Sbjct: 1 AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAI 54 >gi|224283694|ref|ZP_03647016.1| Ferredoxin [Bifidobacterium bifidum NCIMB 41171] gi|311064916|ref|YP_003971642.1| ferredoxin [Bifidobacterium bifidum PRL2010] gi|313140850|ref|ZP_07803043.1| ferredoxin [Bifidobacterium bifidum NCIMB 41171] gi|310867236|gb|ADP36605.1| FdxC Ferredoxin [Bifidobacterium bifidum PRL2010] gi|313133360|gb|EFR50977.1| ferredoxin [Bifidobacterium bifidum NCIMB 41171] Length = 107 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI D Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 60 EPGLELWLK 68 P W K Sbjct: 61 LPDEWAWYK 69 >gi|226361046|ref|YP_002778824.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239531|dbj|BAH49879.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 553 Score = 67.0 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENF-----LAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + E F L I P+ CIDCG C CPV Sbjct: 1 MAYVITQAC--CNDASCVSACPVNCIHPTPEEREFAQTEMLHIDPETCIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 DAI P+ + L + IN+EY T P Sbjct: 59 DAIFPEDKLVGSLARYKDINAEYYTTNP 86 >gi|111018949|ref|YP_701921.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110818479|gb|ABG93763.1| probable ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 553 Score = 67.0 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENF-----LAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + E F L I P+ CIDCG C CPV Sbjct: 1 MAYVITQAC--CNDASCVSACPVNCIHPTPEEREFAQTEMLHIDPETCIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 DAI P+ + L + IN+EY T P Sbjct: 59 DAIFPEDKLIGSLTRYKDINAEYYTTNP 86 >gi|15865463|emb|CAC81334.1| putative ferredoxin [Pseudomonas sp. KIE171] Length = 112 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+++ CI + CV+VCPVDC YE E L I PDEC +CG CE CPV AI D Sbjct: 1 MPYVISDPCIKSRDQACVDVCPVDCIYEAEGRLWIQPDECTECGACESVCPVTAICYVDA 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 E + + + T P S A K+ +K + + Sbjct: 61 ESDDQDLREAREFFDTVLPGCDGPIGSPRGAQKVGRIKSDHPRVL 105 >gi|227874543|ref|ZP_03992706.1| possible ferredoxin [Mobiluncus mulieris ATCC 35243] gi|269977657|ref|ZP_06184624.1| ferredoxin [Mobiluncus mulieris 28-1] gi|306817830|ref|ZP_07451569.1| ferredoxin [Mobiluncus mulieris ATCC 35239] gi|307701395|ref|ZP_07638415.1| ferredoxin [Mobiluncus mulieris FB024-16] gi|227844752|gb|EEJ54898.1| possible ferredoxin [Mobiluncus mulieris ATCC 35243] gi|269934260|gb|EEZ90827.1| ferredoxin [Mobiluncus mulieris 28-1] gi|304649309|gb|EFM46595.1| ferredoxin [Mobiluncus mulieris ATCC 35239] gi|307613410|gb|EFN92659.1| ferredoxin [Mobiluncus mulieris FB024-16] Length = 106 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTYV+ + C+ K CV+ CPVDC YEG L I+P EC+DCG CE CP +AI + D Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGARTLYINPLECVDCGACEAVCPTEAIFYEDD 60 Query: 59 TEPGLELWLKINSEY 73 E +L+ N ++ Sbjct: 61 LPAEWEDYLRANRDF 75 >gi|227501607|ref|ZP_03931656.1| ferredoxin [Corynebacterium accolens ATCC 49725] gi|306835772|ref|ZP_07468773.1| ferredoxin [Corynebacterium accolens ATCC 49726] gi|227077632|gb|EEI15595.1| ferredoxin [Corynebacterium accolens ATCC 49725] gi|304568346|gb|EFM43910.1| ferredoxin [Corynebacterium accolens ATCC 49726] Length = 95 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + E W+ N A Sbjct: 5 CVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDDVPDE-WIDYNDANAAF 63 Query: 77 WPNITT 82 + ++ + Sbjct: 64 FDDLGS 69 >gi|269836661|ref|YP_003318889.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785924|gb|ACZ38067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 80 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 48/78 (61%), Gaps = 6/78 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI-- 55 MTYV+ E CI K CVEVCPVDC + E E + I PDECIDCGVC CPV+AI Sbjct: 1 MTYVIAEPCIGVKDASCVEVCPVDCIHSDDEAEQYY-IDPDECIDCGVCAEVCPVEAIFF 59 Query: 56 KPDTEPGLELWLKINSEY 73 + D +L+IN EY Sbjct: 60 EDDLPEQWADFLRINREY 77 >gi|296165553|ref|ZP_06848081.1| ferredoxin-NADP reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899092|gb|EFG78570.1| ferredoxin-NADP reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 539 Score = 66.6 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 10/63 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTYV+T++C CK CV VCPVDC G L I P CIDCG C CPV Sbjct: 1 MTYVITQSC--CKDASCVPVCPVDCIRPVGATGEITGTEMLYIDPVTCIDCGACVDACPV 58 Query: 53 DAI 55 DAI Sbjct: 59 DAI 61 >gi|331699698|ref|YP_004335937.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954387|gb|AEA28084.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 112 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 40/60 (66%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YV+ +C+ CV+ CPVDC Y G ++P ECIDCG CEP CPV+AI P+++ Sbjct: 1 MSYVIGASCVDVTDRACVDECPVDCIYVGGRMAYVNPTECIDCGACEPVCPVEAIVPESD 60 >gi|226361233|ref|YP_002779011.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239718|dbj|BAH50066.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 561 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV VCPVDC + N L I P CIDCG C CPV Sbjct: 1 MAHVVTQSC--CNDASCVAVCPVDCIHPTPNEPGYGRAEMLYIDPVGCIDCGACIDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEY 73 DAI PD + P + +IN+ Y Sbjct: 59 DAILPDYDLTPETARYEEINAAY 81 >gi|295696289|ref|YP_003589527.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus tusciae DSM 2912] gi|295411891|gb|ADG06383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus tusciae DSM 2912] Length = 78 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/55 (60%), Positives = 38/55 (69%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T CI K +CVEVCPVD +EGE+ I PD CIDCG CEP CPV AI Sbjct: 1 MAFVITSPCIDEKAAECVEVCPVDAIHEGEDQYYIDPDTCIDCGACEPVCPVSAI 55 >gi|157830233|pdb|1BD6|A Chain A, 7-Fe Ferredoxin From Bacillus Schlegelii, Nmr, Minimized Average Structure Length = 77 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/53 (64%), Positives = 37/53 (69%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI Sbjct: 2 YVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAI 54 >gi|32476854|ref|NP_869848.1| ferredoxin [Rhodopirellula baltica SH 1] gi|32447402|emb|CAD78991.1| ferredoxin [Rhodopirellula baltica SH 1] Length = 84 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT VVT+ CI CK C+ VCP DCF+E E + I+PD+C+DC C PECP +AI Sbjct: 1 MTMVVTQPCIGCKDKACLTVCPADCFHEDEQMVYINPDDCVDCEACIPECPTEAI 55 >gi|207724517|ref|YP_002254914.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum MolK2] gi|207739155|ref|YP_002257548.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum IPO1609] gi|206589739|emb|CAQ36700.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum MolK2] gi|206592528|emb|CAQ59434.1| probable ferredoxin protein 3fe-4s [Ralstonia solanacearum IPO1609] Length = 96 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 5/95 (5%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYATQ--WP 78 +DCF+ G NFL I PD CIDC +C PECPV AI + D ++ +N++ + + WP Sbjct: 1 MDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAEADVPADQREFIALNAQLSRRPDWP 60 Query: 79 NITTKKESLPSAAKMDGVKQKYEKYF-SPNPGGKN 112 +T + L A+ VK K +P PG + Sbjct: 61 RLTQVQPPLADHARWAQVKDKRSTLLIAPEPGTQT 95 >gi|327537530|gb|EGF24249.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopirellula baltica WH47] Length = 84 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT VVT+ CI CK C+ VCP DCF+E E + I+PD+C+DC C PECP +AI Sbjct: 1 MTMVVTQPCIGCKDKACLTVCPADCFHEDEQMVYINPDDCVDCEACIPECPTEAI 55 >gi|6729719|pdb|1BQX|A Chain A, Artificial Fe8s8 Ferredoxin: The D13c Variant Of Bacillus Schlegelii Fe7s8 Ferredoxin gi|6729750|pdb|1BWE|A Chain A, Artificial Fe8s8 Ferredoxin: The D13c Variant Of Bacillus Schlegelii Fe7s8 Ferredoxin Length = 77 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/54 (62%), Positives = 37/54 (68%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI Sbjct: 1 AYVITEPCIGTKCASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAI 54 >gi|119952330|ref|YP_949931.1| putative ferredoxin-NADP reductase [Arthrobacter aurescens TC1] gi|119951460|gb|ABM10370.1| putative Ferredoxin-NADP reductase [Arthrobacter aurescens TC1] Length = 531 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 14/99 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC---------FYEGENFLAIHPDECIDCGVCEPECP 51 MTYV+T C C C+ VCPV C F E L I P CIDCG C ECP Sbjct: 1 MTYVITHGC--CSDASCIPVCPVQCIRPRPGDPDFTTAEQ-LYIDPATCIDCGACMDECP 57 Query: 52 VDAIKP--DTEPGLELWLKINSEYATQWPNITTKKESLP 88 V AI P D L +L +N++Y P + + P Sbjct: 58 VSAIHPEWDLPDELSEYLAVNADYYVDNPIVESSPVEPP 96 >gi|317122344|ref|YP_004102347.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter marianensis DSM 12885] gi|315592324|gb|ADU51620.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter marianensis DSM 12885] Length = 78 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 39/60 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K C EVCPVDC YEGE+ L I+PDECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGVKDKSCQEVCPVDCIYEGEDQLYINPDECIGCSACAAVCPVEAIYDEDE 60 >gi|108804033|ref|YP_643970.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765276|gb|ABG04158.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 79 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 40/60 (66%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+TE CI K CVEV PVDC + I+P+ECIDCG CEPEC V+AI P+ E Sbjct: 1 MPYVITEPCIGTKDQSCVEVYPVDCICDAGEQFMINPEECIDCGACEPECTVEAIYPEDE 60 >gi|262201358|ref|YP_003272566.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084705|gb|ACY20673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 527 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDA 54 +V+T++C C CV VCPV+C + + L I P+ CIDCG C CPVDA Sbjct: 2 FVITQSC--CSDAACVSVCPVNCIHPTPEERGFGSSDILHIDPEACIDCGACADACPVDA 59 Query: 55 IKPDTEPGL--ELWLKINSEYATQWPNITTKKESL 87 I P G ++++ IN+++ P + + S+ Sbjct: 60 IYPADRLGTRDKVFIDINADFYKNNPAVKSGWSSV 94 >gi|331698058|ref|YP_004334297.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952747|gb|AEA26444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 113 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/58 (53%), Positives = 37/58 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 MTYVVT+ C+ C+E CPVDC YEG+ + I+P ECIDCG CE CP A D Sbjct: 1 MTYVVTDACVDVLDRSCLEECPVDCIYEGDRKMYINPVECIDCGACEQACPTAAAVAD 58 >gi|221633402|ref|YP_002522627.1| hypothetical protein trd_1422 [Thermomicrobium roseum DSM 5159] gi|221155410|gb|ACM04537.1| conserved domain protein [Thermomicrobium roseum DSM 5159] Length = 83 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 6/78 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI-- 55 MTYV+ E CI K CVEVCPVDC E E + I+PDECIDCGVC CPV+AI Sbjct: 1 MTYVIAEPCIGVKDASCVEVCPVDCIKSDPEAEQYF-INPDECIDCGVCAEVCPVEAIYF 59 Query: 56 KPDTEPGLELWLKINSEY 73 + D +L+ N EY Sbjct: 60 EDDLPEQWRHYLQKNREY 77 >gi|145220987|ref|YP_001131665.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145213473|gb|ABP42877.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 142 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 26 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 85 Query: 61 -PGLEL-WLKINSEYAT 75 P EL +L N+ + T Sbjct: 86 LPDEELAFLDDNAAFFT 102 >gi|313679357|ref|YP_004057096.1| ferredoxin [Oceanithermus profundus DSM 14977] gi|313152072|gb|ADR35923.1| ferredoxin [Oceanithermus profundus DSM 14977] Length = 82 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 3/63 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 M +++ E C+ K CVEVCPV+C YE + L IHP+ECIDCG C P CPV AI P Sbjct: 1 MAHIICEPCVGVKDKACVEVCPVECIYEAPAEYDMLYIHPEECIDCGACVPACPVSAIFP 60 Query: 58 DTE 60 + + Sbjct: 61 EED 63 >gi|254818988|ref|ZP_05223989.1| putative ferredoxin FdxA [Mycobacterium intracellulare ATCC 13950] Length = 106 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 3/80 (3%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE-Y 73 CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + D L+ L N+ + Sbjct: 5 CVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDDLPEDLQPHLADNAAFF 64 Query: 74 ATQWPNITTKKESLPSAAKM 93 A P S AAK+ Sbjct: 65 AETLPGRDEPLGSPGGAAKV 84 >gi|282862944|ref|ZP_06272004.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282561926|gb|EFB67468.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 548 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENF-----LAIHPDECIDCGVCEPECPV 52 MTY +T+ C C C+ VCPV+C + E +F L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCIAVCPVNCIHPTPEERDFGSTEMLHIDPKSCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P L + +IN+ Y Sbjct: 59 DAIFPVESLTGALREYEQINAAY 81 >gi|307323385|ref|ZP_07602595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306890874|gb|EFN21850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 106 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/60 (51%), Positives = 37/60 (61%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ +C+ C+E CPVDC YEGE L I+P ECIDCG CE CP AI D + Sbjct: 1 MAYVIGASCVDIMDRSCMEECPVDCIYEGERKLYINPVECIDCGACEVACPEQAITVDRK 60 >gi|315442042|ref|YP_004074921.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315260345|gb|ADT97086.1| ferredoxin [Mycobacterium sp. Spyr1] Length = 117 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESL---PSAAKMDGV 96 P EL +L N+ + T ++ + E L AAK+ V Sbjct: 61 LPDEELAFLDDNAAFFTT--TLSGRDEPLGDPGGAAKLGRV 99 >gi|158318597|ref|YP_001511105.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|4325127|gb|AAD17275.1| ferredoxin I [Frankia sp. EuIK1] gi|158114002|gb|ABW16199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 113 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 6/99 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT CI K T C++ CPVD YEG+ L I+P+EC +CG C CP+ AI D E Sbjct: 1 MPYVVTSPCIDVKDTACLDECPVDAIYEGDRKLYINPNECTECGACASACPIGAIMLDLE 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESL--PSAAKMDG 95 P E ++K E+ T+ + + E L P AK G Sbjct: 61 VPKAERPFVKSEKEFFTKV--LPGRDEPLGDPGGAKTVG 97 >gi|111223262|ref|YP_714056.1| ferredoxin [Frankia alni ACN14a] gi|111150794|emb|CAJ62498.1| Ferredoxin [Frankia alni ACN14a] Length = 115 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 45/87 (51%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T CI K C+E CP DC YEG+ + I+PDEC +CG C CPV A D Sbjct: 5 MPYVITAACIDVKDGSCLEGCPADCIYEGDRKMYINPDECTECGACAVSCPVGAALSDDR 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESL 87 + I+SE A + + E L Sbjct: 65 VKAKDKEFIDSEAAFFTDILPGRDEPL 91 >gi|326778460|ref|ZP_08237725.1| Ferredoxin--NADP(+) reductase [Streptomyces cf. griseus XylebKG-1] gi|326658793|gb|EGE43639.1| Ferredoxin--NADP(+) reductase [Streptomyces cf. griseus XylebKG-1] Length = 554 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P G + IN+ Y Sbjct: 59 DAIFPVDALSAGQREYADINAAY 81 >gi|182437825|ref|YP_001825544.1| putative ferredoxin reductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466341|dbj|BAG20861.1| putative ferredoxin reductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 554 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P G + IN+ Y Sbjct: 59 DAIFPVDALSAGQREYADINAAY 81 >gi|269784345|emb|CBH51374.1| ferredoxin [Amycolatopsis balhimycina] Length = 137 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 34/55 (61%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ C+ K CV CP DC YEG L IHPDEC++CG CE CPV A+ Sbjct: 1 MAYVIGLPCVDVKDRACVAECPTDCIYEGARSLYIHPDECMECGACEVVCPVGAV 55 >gi|229541517|ref|ZP_04430577.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus coagulans 36D1] gi|229325937|gb|EEN91612.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus coagulans 36D1] Length = 82 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 39/55 (70%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T+ CI K +CV+VCPVDC EGE+ I PD CIDCG C+ CPV+AI Sbjct: 5 MAFVITQPCIGEKAAECVDVCPVDCIAEGEDQYFIDPDICIDCGACQAVCPVEAI 59 >gi|120401325|ref|YP_951154.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954143|gb|ABM11148.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 117 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query: 61 -PGLEL-WLKINSEYATQ 76 P E+ +L+ N+ + T Sbjct: 61 LPDEEMEFLEDNAAFFTM 78 >gi|118467681|ref|YP_889914.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium smegmatis str. MC2 155] gi|118168968|gb|ABK69864.1| probable ferredoxin/ferredoxin--NADP reductase [Mycobacterium smegmatis str. MC2 155] Length = 557 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 18/103 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I PD C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPDACVDCGACVSACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 AI PDT EP +++IN+ + +P ++ LP +K+ Sbjct: 59 GAIAPDTRLEPRQLPFVEINAAF---YPK---REGKLPPTSKL 95 >gi|320012396|gb|ADW07246.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Streptomyces flavogriseus ATCC 33331] Length = 556 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENF-----LAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + E +F L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCVSVCPVNCIHPTPEEPDFGRTEMLYIDPRSCIDCGACADACPV 58 Query: 53 DAIKP-DTEPGLEL-WLKINSEY 73 +A+ P D+ P + + IN+EY Sbjct: 59 EAVFPVDSLPAAQAEYGPINAEY 81 >gi|56964420|ref|YP_176151.1| ferredoxin [Bacillus clausii KSM-K16] gi|56910663|dbj|BAD65190.1| ferredoxin [Bacillus clausii KSM-K16] Length = 79 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ CI K +CV+VCPVDC EGE+ I+PD CIDCG C+ CPVDAI + E Sbjct: 1 MAFVILSPCIGEKAGECVDVCPVDCIEEGEDQYFINPDICIDCGACQGVCPVDAIVEEYE 60 Query: 61 --PGLELWLKINSEY 73 P + +LK E+ Sbjct: 61 MAPEDQKFLKKAEEF 75 >gi|296393262|ref|YP_003658146.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180409|gb|ADG97315.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Segniliparus rotundus DSM 44985] Length = 112 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 36/55 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +VV E C+ CVE CPVDC Y G+ + I+PD CIDCG CE CPV+AI Sbjct: 1 MAFVVAEPCVDVIDRSCVEECPVDCMYLGKRMVYINPDLCIDCGACESVCPVEAI 55 >gi|239942291|ref|ZP_04694228.1| putative ferredoxin reductase [Streptomyces roseosporus NRRL 15998] gi|239988757|ref|ZP_04709421.1| putative ferredoxin reductase [Streptomyces roseosporus NRRL 11379] gi|291445751|ref|ZP_06585141.1| ferredoxin-NADP+ reductase [Streptomyces roseosporus NRRL 15998] gi|291348698|gb|EFE75602.1| ferredoxin-NADP+ reductase [Streptomyces roseosporus NRRL 15998] Length = 556 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P G + IN+ Y Sbjct: 59 DAIFPVDSLSAGQREYADINAAY 81 >gi|307610629|emb|CBX00217.1| hypothetical protein LPW_19621 [Legionella pneumophila 130b] Length = 78 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 IHPDECIDC +CEPECPV+AI + D + + ++N+E + WPNIT KK++ A Sbjct: 2 IHPDECIDCALCEPECPVNAIVSEDDLTEEQQQFKELNAELSKTWPNITAKKDAPSDAKD 61 Query: 93 MDGVKQKYE 101 + VK K + Sbjct: 62 WEEVKDKLQ 70 >gi|148359470|ref|YP_001250677.1| ferredoxin I [Legionella pneumophila str. Corby] gi|148281243|gb|ABQ55331.1| ferredoxin I [Legionella pneumophila str. Corby] Length = 78 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 IHPDECIDC +CEPECPV+AI + D + + ++N+E + WPNIT KK++ A Sbjct: 2 IHPDECIDCALCEPECPVNAIVSEDDLTDEQQQFKELNAELSKTWPNITAKKDAPSDAKD 61 Query: 93 MDGVKQKYE 101 + VK K + Sbjct: 62 WEEVKDKLQ 70 >gi|328887041|emb|CCA60280.1| Ferredoxin or Ferredoxin--NADP(+) reductase,actinobacterial (eukaryote) type [Streptomyces venezuelae ATCC 10712] Length = 552 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 36/65 (55%), Gaps = 10/65 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENF-----LAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + E +F L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEEPDFGTTEMLYIDPKSCIDCGACADACPV 58 Query: 53 DAIKP 57 DAI P Sbjct: 59 DAIFP 63 >gi|108799685|ref|YP_639882.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119868795|ref|YP_938747.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126435329|ref|YP_001071020.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108770104|gb|ABG08826.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119694884|gb|ABL91957.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126235129|gb|ABN98529.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 114 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 38/60 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV CPVDC YEG+ + I+PDEC+DCG C C +DAI +T+ Sbjct: 1 MTYVIGSACVDVVDKSCVPECPVDCIYEGDRVMYINPDECVDCGACRVICKMDAIFYETD 60 >gi|313902860|ref|ZP_07836256.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter subterraneus DSM 13965] gi|313466795|gb|EFR62313.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter subterraneus DSM 13965] Length = 78 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/60 (53%), Positives = 39/60 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K C EVCPVDC YEG++ L I+P+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGVKDKSCQEVCPVDCIYEGDDQLYINPEECIGCSACAAVCPVEAIYDEDE 60 >gi|54024557|ref|YP_118799.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54016065|dbj|BAD57435.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 554 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPVDC + L I P+ CIDCG C CPV Sbjct: 1 MAYVITQRC--CNDASCVAECPVDCIRPRPEDPEFTSAEMLYIDPETCIDCGACFEACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNIT 81 A+ + E L+ + +IN+++ + P T Sbjct: 59 GAVYAEDELPAQLDRYREINADWFARHPMTT 89 >gi|239981284|ref|ZP_04703808.1| putative ferredoxin reductase [Streptomyces albus J1074] gi|291453142|ref|ZP_06592532.1| ferredoxin-NADP+ reductase [Streptomyces albus J1074] gi|291356091|gb|EFE82993.1| ferredoxin-NADP+ reductase [Streptomyces albus J1074] Length = 535 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 33/65 (50%), Gaps = 10/65 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRSCIDCGACADACPV 58 Query: 53 DAIKP 57 DAI P Sbjct: 59 DAIFP 63 >gi|23099185|ref|NP_692651.1| ferredoxin [3Fe-4S][4Fe-4S] [Oceanobacillus iheyensis HTE831] gi|22777413|dbj|BAC13686.1| ferredoxin [3Fe-4S][4Fe-4S] [Oceanobacillus iheyensis HTE831] Length = 79 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 37/55 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T C K +CVEVCPVDC EG++ I PD CIDCG CE CPV+AI Sbjct: 1 MAFVITSPCKTEKAGECVEVCPVDCIEEGKDMFYIEPDICIDCGACEAVCPVEAI 55 >gi|54027063|ref|YP_121305.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54018571|dbj|BAD59941.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 556 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPVDC + L I PD CIDCG C CPV Sbjct: 1 MAYVITQRC--CNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPV 58 Query: 53 DAI--KPDTEPGLELWLKINSEYATQWP 78 +AI + D L + +N+ Y + P Sbjct: 59 EAIFSEDDLTASLARFRDVNAAYFQRHP 86 >gi|300785297|ref|YP_003765588.1| ferredoxin--NADP+ reductase [Amycolatopsis mediterranei U32] gi|299794811|gb|ADJ45186.1| ferredoxin--NADP+ reductase [Amycolatopsis mediterranei U32] Length = 489 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + + L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CTDATCVSVCPVNCIHPTPDEPDFGTTDLLYIDPVTCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P D L + +IN+EY Sbjct: 59 DAIFPAGDLTGPLRAYEQINAEY 81 >gi|183982996|ref|YP_001851287.1| ferredoxin FdxA_2 [Mycobacterium marinum M] gi|183176322|gb|ACC41432.1| ferredoxin FdxA_2 [Mycobacterium marinum M] Length = 114 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 34/55 (61%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTYV+ C+ C + CPVDC YEG + I+PDEC+DCG C+ C V AI Sbjct: 1 MTYVIGRECVDVAEKSCTQECPVDCIYEGARTMYINPDECVDCGACKTTCRVGAI 55 >gi|288918987|ref|ZP_06413329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288349633|gb|EFC83868.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 113 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 6/99 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT CI K C++ CPVD YEG L I+P+EC +CG C CP+ AI D E Sbjct: 1 MPYVVTSPCIDVKDGACLDECPVDAIYEGARKLYINPNECTECGACASACPIGAIMLDLE 60 Query: 61 -PGLEL-WLKINSEYATQWPNITTKKESL--PSAAKMDG 95 P E ++K + E+ ++ + + E L P AK G Sbjct: 61 VPKPERPFVKTDKEFFSKA--LPGRDEPLGDPGGAKAAG 97 >gi|226309118|ref|YP_002769078.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226188235|dbj|BAH36339.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 575 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 14/84 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLHIDPQACVDCGACVSACPV 58 Query: 53 DAIKPD---TEPGLELWLKINSEY 73 DAI P+ T+P ++L IN+++ Sbjct: 59 DAIVPESKLTDPQ-RVFLSINADF 81 >gi|289555333|ref|ZP_06444543.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 605] gi|289439965|gb|EFD22458.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 605] Length = 550 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWP 78 AI P+T E +++IN+ Y + P Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRP 86 >gi|229491834|ref|ZP_04385655.1| ferredoxin--NADP+ reductase [Rhodococcus erythropolis SK121] gi|229321515|gb|EEN87315.1| ferredoxin--NADP+ reductase [Rhodococcus erythropolis SK121] Length = 575 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 14/84 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLHIDPQACVDCGACVSACPV 58 Query: 53 DAIKPD---TEPGLELWLKINSEY 73 DAI P+ T+P ++L IN+++ Sbjct: 59 DAIVPESKLTDPQ-RVFLSINADF 81 >gi|297195797|ref|ZP_06913195.1| ferredoxin-NADP+ reductase [Streptomyces pristinaespiralis ATCC 25486] gi|297152954|gb|EFH32068.1| ferredoxin-NADP+ reductase [Streptomyces pristinaespiralis ATCC 25486] Length = 452 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCVAVCPVNCIHPTPEERAFGSTEMLYIDPRSCIDCGACADACPV 58 Query: 53 DAIKP-DTEPGLEL-WLKINSEY 73 DAI P D+ G + + IN+ Y Sbjct: 59 DAIFPVDSLSGSQQEYAAINAAY 81 >gi|86741719|ref|YP_482119.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86568581|gb|ABD12390.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 111 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 35/58 (60%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+T CI K C+E CP DC YEG+ + I+PDEC +CG C CPV A D Sbjct: 1 MPFVITAACIDVKDGSCLEGCPADCIYEGDRKMYINPDECTECGACAVSCPVGAAISD 58 >gi|218288541|ref|ZP_03492818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|258511869|ref|YP_003185303.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241198|gb|EED08373.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|257478595|gb|ACV58914.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 79 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 36/55 (65%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T CI K DCVE CPVD +EG + I PD CIDC CEP CPV+AI Sbjct: 1 MPFVITSPCIGEKAADCVETCPVDAIHEGPDQYYIDPDLCIDCAACEPVCPVNAI 55 >gi|332973090|gb|EGK11025.1| ferredoxin [Desmospora sp. 8437] Length = 77 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M +V+T C K +CVEVCPVDC + E I PD CI+CG CEP CPV+AI + D Sbjct: 1 MAFVITSACKDEKAAECVEVCPVDCIHGDEVMYYIDPDTCIECGACEPVCPVEAIYEEDM 60 Query: 60 EPGLEL-WLKINSEY 73 P E +++IN+ + Sbjct: 61 VPEEEKEYIQINANF 75 >gi|56964940|ref|YP_176671.1| ferredoxin [Bacillus clausii KSM-K16] gi|56911183|dbj|BAD65710.1| ferredoxin [Bacillus clausii KSM-K16] Length = 79 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/60 (51%), Positives = 40/60 (66%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M++V+ CI K +C EVCPVDC EG++ I+PD CIDCG C+ CPVDAI + E Sbjct: 1 MSFVILSPCIGEKAGECAEVCPVDCIEEGDDQYFINPDICIDCGACQGVCPVDAIVEEYE 60 >gi|326329869|ref|ZP_08196186.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] gi|325952336|gb|EGD44359.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] Length = 560 Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 14/90 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC---------FYEGENFLAIHPDECIDCGVCEPECP 51 M +VVT++C C CV CPV+C F E E L + C+DCG C CP Sbjct: 1 MPHVVTQSC--CADASCVVACPVNCIHPAPGEPGFGEAE-MLYVDAKSCVDCGACVTACP 57 Query: 52 VDAIKPDT--EPGLELWLKINSEYATQWPN 79 DAI P T G + +L IN+EY +P+ Sbjct: 58 ADAIVPHTTLSEGQKPFLAINAEYFEVFPH 87 >gi|296120281|ref|YP_003628059.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296012621|gb|ADG65860.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 84 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 MT VVTE C CK C+ VCP DCF+E + I+P+ECIDC C ECPV AI D Sbjct: 1 MTMVVTEPCRGCKDKACLVVCPCDCFHEDAEMVYINPEECIDCDACVSECPVSAIFHEDN 60 Query: 60 EPGL-ELWLKINSEYATQWP 78 P + ++++N++ + P Sbjct: 61 VPAQWQHFVELNAQRSRVCP 80 >gi|302547666|ref|ZP_07300008.1| ferredoxin [Streptomyces hygroscopicus ATCC 53653] gi|302465284|gb|EFL28377.1| ferredoxin [Streptomyces himastatinicus ATCC 53653] Length = 108 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 34/58 (58%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ C+ C+E CPVDC YEG L I+P ECIDCG CE CP AI D Sbjct: 1 MAYVIGPACVDIMDRSCMEECPVDCIYEGMRKLYINPVECIDCGACETACPEQAIAVD 58 >gi|306792261|ref|ZP_07430563.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu005] gi|308339184|gb|EFP28035.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu005] Length = 575 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWP 78 AI P+T E +++IN+ Y + P Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRP 86 >gi|15608026|ref|NP_215401.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium tuberculosis H37Rv] gi|15840300|ref|NP_335337.1| ferredoxin/ferredoxin--NADP reductase, putative [Mycobacterium tuberculosis CDC1551] gi|31792074|ref|NP_854567.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium bovis AF2122/97] gi|121636809|ref|YP_977032.1| putative NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660663|ref|YP_001282186.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium tuberculosis H37Ra] gi|148822094|ref|YP_001286848.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis F11] gi|167968347|ref|ZP_02550624.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis H37Ra] gi|215402685|ref|ZP_03414866.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|215410472|ref|ZP_03419280.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|215426152|ref|ZP_03424071.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|215429743|ref|ZP_03427662.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|218752551|ref|ZP_03531347.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|219556751|ref|ZP_03535827.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|224989280|ref|YP_002643967.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800092|ref|YP_003033093.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 1435] gi|254231194|ref|ZP_04924521.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis C] gi|254363817|ref|ZP_04979863.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis str. Haarlem] gi|254549863|ref|ZP_05140310.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185781|ref|ZP_05763255.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|260199906|ref|ZP_05767397.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|260204088|ref|ZP_05771579.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289442296|ref|ZP_06432040.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|289446451|ref|ZP_06436195.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|289568850|ref|ZP_06449077.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|289573512|ref|ZP_06453739.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289744616|ref|ZP_06503994.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|289749408|ref|ZP_06508786.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|289752941|ref|ZP_06512319.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|289761017|ref|ZP_06520395.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|294996366|ref|ZP_06802057.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 210] gi|297633403|ref|ZP_06951183.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 4207] gi|297730388|ref|ZP_06959506.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN R506] gi|298524378|ref|ZP_07011787.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|313657715|ref|ZP_07814595.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN V2475] gi|54037133|sp|P65528|FPRB_MYCTU RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|54037134|sp|P65529|FPRB_MYCBO RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|1314025|emb|CAA97393.1| PROBABLE NADPH:ADRENODOXIN OXIDOREDUCTASE FPRB (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE) [Mycobacterium tuberculosis H37Rv] gi|13880462|gb|AAK45151.1| ferredoxin/ferredoxin--NADP reductase, putative [Mycobacterium tuberculosis CDC1551] gi|31617661|emb|CAD93771.1| PROBABLE NADPH:ADRENODOXIN OXIDOREDUCTASE FPRB (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE) [Mycobacterium bovis AF2122/97] gi|121492456|emb|CAL70924.1| Probable nadph:adrenodoxin oxidoreductase fprB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600253|gb|EAY59263.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis C] gi|134149331|gb|EBA41376.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis str. Haarlem] gi|148504815|gb|ABQ72624.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium tuberculosis H37Ra] gi|148720621|gb|ABR05246.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis F11] gi|224772393|dbj|BAH25199.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321595|gb|ACT26198.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 1435] gi|289415215|gb|EFD12455.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|289419409|gb|EFD16610.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|289537943|gb|EFD42521.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289542604|gb|EFD46252.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|289685144|gb|EFD52632.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|289689995|gb|EFD57424.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|289693528|gb|EFD60957.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|289708523|gb|EFD72539.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|298494172|gb|EFI29466.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|323720595|gb|EGB29673.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CDC1551A] gi|326904895|gb|EGE51828.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis W-148] gi|328459830|gb|AEB05253.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 4207] Length = 575 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWP 78 AI P+T E +++IN+ Y + P Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRP 86 >gi|317509391|ref|ZP_07967010.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252314|gb|EFV11765.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 548 Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDGSCVFACPVNCIHPTPDEPDFLTAEMLHIDPAACVDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEY 73 +AI PDT+ P +L++N+ Y Sbjct: 59 EAIVPDTKLAPKQLPFLELNASY 81 >gi|134100924|ref|YP_001106585.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] gi|291003463|ref|ZP_06561436.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] gi|133913547|emb|CAM03660.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] Length = 508 Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M Y +T+ C C CV+VCPV+C + + L I P CIDCG C CPV Sbjct: 1 MAYAITQTC--CNDASCVKVCPVNCIHPTPDEPDFGTAEMLHIDPATCIDCGACADACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEY 73 +AI P E L+ + ++N+ Y Sbjct: 59 EAIFPVEELTGPLKPYAEVNAAY 81 >gi|296169651|ref|ZP_06851269.1| ferredoxin--NADP(+) reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895648|gb|EFG75344.1| ferredoxin--NADP(+) reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 563 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 16/103 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKM 93 AI PDT + +++IN+ + + P + E +P +K+ Sbjct: 59 GAIAPDTRLDSKQLPFVEINASFYPERP----EGEKVPPTSKL 97 >gi|87312333|ref|ZP_01094428.1| ferredoxin [Blastopirellula marina DSM 3645] gi|87284955|gb|EAQ76894.1| ferredoxin [Blastopirellula marina DSM 3645] Length = 71 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 2/67 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNI 80 ++CFYEG+ L IHP+ECIDC C PECPV+AI + + + ++++N+E A Q I Sbjct: 1 MECFYEGDKILYIHPEECIDCEACVPECPVEAIFHEDNVPEEWQGFIELNAEMAPQCEVI 60 Query: 81 TTKKESL 87 T KKE L Sbjct: 61 TEKKEPL 67 >gi|284043842|ref|YP_003394182.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283948063|gb|ADB50807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 89 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+ ++CI K CVEVCPVDC ++ + L I+P+ECIDC C +CPV Sbjct: 1 MAYVINQSCIGTKDASCVEVCPVDCIHPTPNEPGFDETDQLYINPEECIDCDACFEQCPV 60 Query: 53 DAIKPD 58 +AI PD Sbjct: 61 NAITPD 66 >gi|119977|sp|P03941|FER_ALIAC RecName: Full=Ferredoxin Length = 78 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/53 (56%), Positives = 35/53 (66%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+T CI K DCVE CPVD +EG + I PD CIDC CEP CPV+AI Sbjct: 2 FVITSPCIGEKAADCVETCPVDAIHEGPDQYYIDPDLCIDCAACEPVCPVNAI 54 >gi|255744608|ref|ZP_05418559.1| ferredoxin [Vibrio cholera CIRS 101] gi|261212100|ref|ZP_05926386.1| ferredoxin [Vibrio sp. RC341] gi|262161260|ref|ZP_06030371.1| ferredoxin [Vibrio cholerae INDRE 91/1] gi|262192462|ref|ZP_06050613.1| ferredoxin [Vibrio cholerae CT 5369-93] gi|255737639|gb|EET93033.1| ferredoxin [Vibrio cholera CIRS 101] gi|260838708|gb|EEX65359.1| ferredoxin [Vibrio sp. RC341] gi|262029010|gb|EEY47663.1| ferredoxin [Vibrio cholerae INDRE 91/1] gi|262031621|gb|EEY50208.1| ferredoxin [Vibrio cholerae CT 5369-93] Length = 75 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C PEC AI + E +++++N+E A WPN+T K ++ A Sbjct: 1 MVINPIECIDCGLCVPECTAQAIFQEDELVGDQRIFIELNAELAEHWPNLTEVKPAMEDA 60 Query: 91 AKMDGVKQKYE 101 AK DGV K + Sbjct: 61 AKWDGVPNKLD 71 >gi|319949121|ref|ZP_08023214.1| putative ferredoxin reductase [Dietzia cinnamea P4] gi|319437231|gb|EFV92258.1| putative ferredoxin reductase [Dietzia cinnamea P4] Length = 551 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 12/82 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T+ C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQAC--CADASCVHACPVNCIHPTPDEPDFATAEMLYIDPVSCVDCGACVGACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSE 72 AI P TE P +L+IN+E Sbjct: 59 GAIVPHTELAPEQHDFLQINAE 80 >gi|118616138|ref|YP_904470.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium ulcerans Agy99] gi|118568248|gb|ABL02999.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium ulcerans Agy99] Length = 561 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 16/103 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVTCVDCGACVSACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKM 93 AI PD+ + +++IN+ Y Q E LP +K+ Sbjct: 59 GAIAPDSRLDSKQLPFVEINASYYPQ----RQGGEKLPPTSKL 97 >gi|183984613|ref|YP_001852904.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium marinum M] gi|183177939|gb|ACC43049.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium marinum M] Length = 561 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 16/103 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKM 93 AI PD+ + +++IN+ Y Q E LP +K+ Sbjct: 59 GAIAPDSRLDSKQLPFVEINASYYPQ----RQGGEKLPPTSKL 97 >gi|302527244|ref|ZP_07279586.1| ferredoxin-NADP+ reductase [Streptomyces sp. AA4] gi|302436139|gb|EFL07955.1| ferredoxin-NADP+ reductase [Streptomyces sp. AA4] Length = 500 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + + L + P CIDCG C CPV Sbjct: 1 MAFAITQTC--CNDATCVSVCPVNCIHPTPDEPDFGTTEMLYVDPASCIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNI 80 DAI P ++++ IN+++ P + Sbjct: 59 DAIFPVDLLTDSMKVYAGINADFFADRPAV 88 >gi|54023376|ref|YP_117618.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54014884|dbj|BAD56254.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 529 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 12/86 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YVVT++C C CV CPV+C + + L + P C+DCG C CPV Sbjct: 1 MPYVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLYVDPQACVDCGACATACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQ 76 DAI + E +++IN+++ Q Sbjct: 59 DAITSSKKLTAEQLPFIEINADFYRQ 84 >gi|296395410|ref|YP_003660294.1| monooxygenase FAD-binding protein [Segniliparus rotundus DSM 44985] gi|296182557|gb|ADG99463.1| monooxygenase FAD-binding protein [Segniliparus rotundus DSM 44985] Length = 556 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFLTAETLHIDPAACVDCGACVHACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEY 73 DAI PD++ E +L+IN+ + Sbjct: 59 DAIAPDSKLTAEQLPFLEINASF 81 >gi|15828144|ref|NP_302407.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae TN] gi|221230621|ref|YP_002504037.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae Br4923] gi|17432976|sp|O33064|FPRB_MYCLE RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|2440106|emb|CAB16679.1| ferredoxin [Mycobacterium leprae] gi|13093698|emb|CAC31089.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae] gi|219933728|emb|CAR72231.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae Br4923] Length = 555 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M Y++T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPYIITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 AI DT P +++IN+ Y P Sbjct: 59 GAIASDTRLAPKQLPFIEINASYYPARP 86 >gi|117164510|emb|CAJ88056.1| putative ferredoxin reductase [Streptomyces ambofaciens ATCC 23877] Length = 510 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CSDATCVSVCPVNCIRPTPEEQAFGSTEMLHIDPKTCIDCGACADACPV 58 Query: 53 DAIKP 57 DAI P Sbjct: 59 DAIFP 63 >gi|23336655|ref|ZP_00121861.1| COG1146: Ferredoxin [Bifidobacterium longum DJO10A] Length = 97 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/43 (60%), Positives = 31/43 (72%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI Sbjct: 4 KDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAI 46 >gi|126641295|ref|YP_001084279.1| 7-Fe ferredoxin [Acinetobacter baumannii ATCC 17978] gi|213156378|ref|YP_002318798.1| ferredoxin-1 [Acinetobacter baumannii AB0057] gi|215483972|ref|YP_002326197.1| Ferredoxin 1 [Acinetobacter baumannii AB307-0294] gi|213055538|gb|ACJ40440.1| ferredoxin-1 [Acinetobacter baumannii AB0057] gi|213987413|gb|ACJ57712.1| Ferredoxin 1 [Acinetobacter baumannii AB307-0294] gi|322507872|gb|ADX03326.1| fdxA [Acinetobacter baumannii 1656-2] gi|323517469|gb|ADX91850.1| ferredoxin [Acinetobacter baumannii TCDC-AB0715] Length = 74 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 I+PDECIDC +CEPECP +AI + E G E+++++N+E + +WPNIT E + Sbjct: 2 INPDECIDCALCEPECPANAIFSEDELPEGQEVFIELNAELSQKWPNITQIGEQPADREE 61 Query: 93 MDGVKQKYE 101 +G K + Sbjct: 62 WNGKPDKLQ 70 >gi|229008434|ref|ZP_04165889.1| Ferredoxin [Bacillus mycoides Rock1-4] gi|228752827|gb|EEM02400.1| Ferredoxin [Bacillus mycoides Rock1-4] Length = 78 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 38/60 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+T CI K DCV+VCPV+C G + I+P CIDCG CE CPV+AI + E Sbjct: 1 MAFVITSPCISEKAADCVDVCPVNCIELGSDQYFINPALCIDCGACETACPVEAIYYEDE 60 >gi|297170989|gb|ADI22004.1| ferredoxin [uncultured myxobacterium HF0200_01L06] Length = 117 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 8/68 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--YEGE------NFLAIHPDECIDCGVCEPECPV 52 MT+V+T C CVEVCPVDC Y G+ N L I P+ECI+CGVCEPECP Sbjct: 1 MTWVITSLCRDKVDMSCVEVCPVDCIVQYTGDDTDKFPNQLYIDPEECINCGVCEPECPW 60 Query: 53 DAIKPDTE 60 +AI D + Sbjct: 61 EAIFEDEQ 68 >gi|23100035|ref|NP_693501.1| ferredoxin [Oceanobacillus iheyensis HTE831] gi|22778266|dbj|BAC14536.1| ferredoxin [Oceanobacillus iheyensis HTE831] Length = 79 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ + C K +CV VCPVDC EG I PD CIDCG C+ CPV AI+ D Sbjct: 1 MAFVILDPCRGEKAGECVSVCPVDCIEEGVKQFYIDPDICIDCGACKAVCPVSAIEEEYD 60 Query: 59 TEPGLELWLKINSEY 73 P E +L+ E+ Sbjct: 61 LTPNQEKYLEEAEEF 75 >gi|116620169|ref|YP_822325.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223331|gb|ABJ82040.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 86 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 34/63 (53%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC Y L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDEPAYADAELLYIDPVECIDCGACVPVCPV 60 Query: 53 DAI 55 AI Sbjct: 61 SAI 63 >gi|284033073|ref|YP_003383004.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Kribbella flavida DSM 17836] gi|283812366|gb|ADB34205.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kribbella flavida DSM 17836] Length = 499 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 11/88 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GE------NFLAIHPDECIDCGVCEPECPV 52 MTYV+ +C C CV CP++C + GE + L I P CIDCG C CPV Sbjct: 1 MTYVIAGDC--CADARCVSACPMNCIHPSPGEPGFGTTDGLFIDPRTCIDCGACAEVCPV 58 Query: 53 DAIKPDTEPGLELWLKINSEYATQWPNI 80 DA +P + + + +N+ Y + P + Sbjct: 59 DAAQP-ADKAAPIDVALNAAYFAERPAV 85 >gi|226304299|ref|YP_002764257.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226183414|dbj|BAH31518.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 574 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV VCP +C Y L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDAACVVVCPANCIHPTPDEPDYARTEILYIDPRSCVDCGACIQACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEY 73 DAI P E P + ++N+ Y Sbjct: 59 DAIVPHDELTPQTIRYAELNALY 81 >gi|111024041|ref|YP_707013.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110823571|gb|ABG98855.1| probable ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 467 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MT+VV +C CK CV VCP +C +E L I P CIDC C CP Sbjct: 1 MTHVVLGHC--CKDASCVRVCPQNCIHPAPGEAGFESAETLFIDPRSCIDCTACVEACPA 58 Query: 53 DAIKPDTEPGL--ELWLKINSEYATQWP 78 AIKP+ + + N+EY Q P Sbjct: 59 SAIKPEWTLTITERPYAARNAEYFEQTP 86 >gi|324997613|ref|ZP_08118725.1| ferredoxin--NADP+ reductase [Pseudonocardia sp. P1] Length = 498 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV CPV+C Y + L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CTDASCVAACPVNCIHPTPDEPDYTTTDMLYIDPRACIDCGACADACPV 58 Query: 53 DAIKP 57 DA+ P Sbjct: 59 DAVFP 63 >gi|325121599|gb|ADY81122.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus PHEA-2] Length = 74 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 2/50 (4%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITT 82 I+PDECIDC +CEPECP +AI + E G E+++++N+E + +WPNIT Sbjct: 2 INPDECIDCALCEPECPANAIFSEDELPEGQEVFIELNAELSQKWPNITQ 51 >gi|94969826|ref|YP_591874.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94551876|gb|ABF41800.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 86 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + E L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDAEAHANEPMLYIDPVECIDCGACVPVCPV 60 Query: 53 DAI 55 AI Sbjct: 61 SAI 63 >gi|320335406|ref|YP_004172117.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319756695|gb|ADV68452.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 78 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDT 59 M YV+T+ C + C EVCP DC ++ I P+ECIDCG C CPV AI D Sbjct: 1 MAYVITDRCAGVRDGACREVCPKDCIHDAGAQFVIDPEECIDCGACVVACPVGAIAHEDD 60 Query: 60 EPGLE-LWLKINSEY 73 G E ++ ++N + Sbjct: 61 LVGAEGVFAQVNRAF 75 >gi|145222311|ref|YP_001132989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214797|gb|ABP44201.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 557 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 10/68 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE 60 AI PD++ Sbjct: 59 GAIAPDSK 66 >gi|315442745|ref|YP_004075624.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase [Mycobacterium sp. Spyr1] gi|315261048|gb|ADT97789.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase [Mycobacterium sp. Spyr1] Length = 557 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 10/68 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE 60 AI PD++ Sbjct: 59 GAIAPDSK 66 >gi|41406923|ref|NP_959759.1| FprB [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395273|gb|AAS03142.1| FprB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 566 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 16/103 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKM 93 AI PD + +++IN+ + + P + LP +K+ Sbjct: 59 GAIAPDNRLDDKQLPFVEINASFYPKRP----AGQKLPPTSKL 97 >gi|284042634|ref|YP_003392974.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283946855|gb|ADB49599.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 86 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTYV+ E CI K C EVCPVDC + ++ L I P+ECIDC C CPV Sbjct: 1 MTYVIAEPCIGEKDHSCTEVCPVDCIHPTQDEPGFAEATMLYIDPEECIDCDACVEACPV 60 Query: 53 DAIKPD 58 DAI P+ Sbjct: 61 DAIFPE 66 >gi|299139029|ref|ZP_07032206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidobacterium sp. MP5ACTX8] gi|298599183|gb|EFI55344.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidobacterium sp. MP5ACTX8] Length = 86 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 11/86 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-------EGE-NFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + GE L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDETGHGEAEQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAI-KPDTEPGLELWLKINSEYATQW 77 AI D P + W+ + AT + Sbjct: 61 SAIYAGDDLP--DKWVSFQEKNATHF 84 >gi|322436219|ref|YP_004218431.1| iron-sulfur cluster-binding protein [Acidobacterium sp. MP5ACTX9] gi|321163946|gb|ADW69651.1| iron-sulfur cluster-binding protein [Acidobacterium sp. MP5ACTX9] Length = 86 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K + CV+ CPVDC Y L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDSACVDACPVDCIHPKKDENGYSDATQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAI 55 AI Sbjct: 61 SAI 63 >gi|225872601|ref|YP_002754056.1| iron-sulfur cluster-binding protein [Acidobacterium capsulatum ATCC 51196] gi|225791610|gb|ACO31700.1| iron-sulfur cluster-binding protein [Acidobacterium capsulatum ATCC 51196] Length = 86 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 34/63 (53%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC Y L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDEGTYGDAEQLYIDPVECIDCGACVPVCPV 60 Query: 53 DAI 55 AI Sbjct: 61 SAI 63 >gi|289756971|ref|ZP_06516349.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] gi|289712535|gb|EFD76547.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] Length = 179 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWP 78 AI P+T E +++IN+ Y + P Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRP 86 >gi|120405980|ref|YP_955809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958798|gb|ABM15803.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 559 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 20/123 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPTPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 AI P+T P ++++N+ + +P + LP +K+ V + E PGG Sbjct: 59 GAIAPETGLAPDQLPFVELNAAF---YPK---RDGKLPPTSKLAPVLEAPE--VRRRPGG 110 Query: 111 KNT 113 T Sbjct: 111 PLT 113 >gi|284047254|ref|YP_003397594.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283951475|gb|ADB54219.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 87 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K CVEVCPVDC Y+ L I P+ECIDC C CPV Sbjct: 1 MAYVIAEPCIGAKDNSCVEVCPVDCIHPTPDEPDYDRVEMLYIDPEECIDCDACVEACPV 60 Query: 53 DA 54 DA Sbjct: 61 DA 62 >gi|320106410|ref|YP_004182000.1| iron-sulfur cluster-binding protein [Terriglobus saanensis SP1PR4] gi|319924931|gb|ADV82006.1| iron-sulfur cluster-binding protein [Terriglobus saanensis SP1PR4] Length = 86 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENF------LAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T C + CPVDC + +GE+ L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACADACPVDCIHPKKGEDGNEEAVQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAI 55 AI Sbjct: 61 SAI 63 >gi|311742320|ref|ZP_07716129.1| ferredoxin--NADP(+) reductase C-terminal domain protein [Aeromicrobium marinum DSM 15272] gi|311313948|gb|EFQ83856.1| ferredoxin--NADP(+) reductase C-terminal domain protein [Aeromicrobium marinum DSM 15272] Length = 559 Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT +C C C CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTRSC--CADASCTFACPVNCIHPTPDEPDFGTAEMLYIDPVSCVDCGACVRACPV 58 Query: 53 DAIKPDTEPG-LEL-WLKINSEY 73 AI P T+ G EL +L+IN+ + Sbjct: 59 GAIVPHTKLGEHELPFLEINAAF 81 >gi|261407735|ref|YP_003243976.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Paenibacillus sp. Y412MC10] gi|261284198|gb|ACX66169.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. Y412MC10] Length = 78 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 33/54 (61%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI Sbjct: 1 MYVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAI 54 >gi|329925765|ref|ZP_08280551.1| ferredoxin [Paenibacillus sp. HGF5] gi|328939645|gb|EGG35990.1| ferredoxin [Paenibacillus sp. HGF5] Length = 78 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 33/54 (61%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI Sbjct: 1 MYVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAI 54 >gi|315647852|ref|ZP_07900953.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus vortex V453] gi|315276498|gb|EFU39841.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus vortex V453] Length = 78 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 33/54 (61%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI Sbjct: 1 MYVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAI 54 >gi|312138771|ref|YP_004006107.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|311888110|emb|CBH47422.1| putative ferredoxin domain oxidoreductase [Rhodococcus equi 103S] Length = 470 Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLA------IHPDECIDCGVCEPECPV 52 M +V+ +C CK CV VCP +C + GE+ A I PD CIDC C CP Sbjct: 1 MAHVILGHC--CKDASCVRVCPQNCIHPAPGEDGFASTETLYIDPDSCIDCTACVDACPA 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESL 87 A+K + P + N E+ Q P T + L Sbjct: 59 SAVKSEHALTPAELPYAARNREFFAQAPAATRTRSRL 95 >gi|325676533|ref|ZP_08156211.1| ferredoxin--NADP(+) reductase [Rhodococcus equi ATCC 33707] gi|325552711|gb|EGD22395.1| ferredoxin--NADP(+) reductase [Rhodococcus equi ATCC 33707] Length = 470 Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLA------IHPDECIDCGVCEPECPV 52 M +V+ +C CK CV VCP +C + GE+ A I PD CIDC C CP Sbjct: 1 MAHVILGHC--CKDASCVRVCPQNCIHPAPGEDGFASTETLYIDPDSCIDCTACVDACPA 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESL 87 A+K + P + N E+ Q P T + L Sbjct: 59 SAVKSEHALTPAELPYAARNREFFAQAPAATRTRSRL 95 >gi|108801425|ref|YP_641622.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119870578|ref|YP_940530.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|108771844|gb|ABG10566.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119696667|gb|ABL93740.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] Length = 561 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFATAEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPD 58 AI P+ Sbjct: 59 GAIAPE 64 >gi|126437410|ref|YP_001073101.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|126237210|gb|ABO00611.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 561 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 10/66 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFATAEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPD 58 AI P+ Sbjct: 59 GAIAPE 64 >gi|218780897|ref|YP_002432215.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762281|gb|ACL04747.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 363 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 5/62 (8%) Query: 3 YVVT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YVV E CI C CVE CP+D F EGE+ +++ P CI CG+C CP +A+ + Sbjct: 272 YVVQFNEEECINC--GTCVERCPMDAFTEGEDVISVDPGRCIGCGLCTTTCPTEALSLEI 329 Query: 60 EP 61 +P Sbjct: 330 QP 331 >gi|126650009|ref|ZP_01722242.1| ferredoxin [3Fe-4S](4Fe-4S) [Bacillus sp. B14905] gi|126593181|gb|EAZ87143.1| ferredoxin [3Fe-4S](4Fe-4S) [Bacillus sp. B14905] Length = 78 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+TE C K C++VCPV+C + I+PD CIDCG CE CPV+AI Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVNTDTQYVINPDICIDCGACELVCPVEAI 55 >gi|326384264|ref|ZP_08205946.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197129|gb|EGD54321.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 546 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 10/64 (15%) Query: 20 VCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKI 69 VCPV+C + + L I P+ CIDCG C ECPV AI PD + E +L+I Sbjct: 3 VCPVNCIHPTPDEPDFLTAEMLYIDPETCIDCGACIDECPVSAIYPDDQLPEKEEPFLQI 62 Query: 70 NSEY 73 N++Y Sbjct: 63 NADY 66 >gi|312143185|ref|YP_003994631.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium sp. 'sapolanicus'] gi|311903836|gb|ADQ14277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium sp. 'sapolanicus'] Length = 56 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+ ++CILC C CPVDC EG+ I DECIDC C CPVDAI Sbjct: 1 MAHVINDDCILCGA--CAPECPVDCISEGDTKYEIDADECIDCAACVSVCPVDAIS 54 >gi|169827413|ref|YP_001697571.1| ferredoxin [Lysinibacillus sphaericus C3-41] gi|168991901|gb|ACA39441.1| Ferredoxin 7Fe (Seven-iron ferredoxin) [Lysinibacillus sphaericus C3-41] Length = 78 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+TE C K C++VCPV+C + I+PD CIDCG CE CPV+AI Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVNTDTQYVINPDICIDCGACELVCPVEAI 55 >gi|326791937|ref|YP_004309758.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium lentocellum DSM 5427] gi|326542701|gb|ADZ84560.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium lentocellum DSM 5427] Length = 57 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y++ E+CI C C CPV C EG++ I+ DECI+CG C CPV A P+ Sbjct: 1 MAYIINEDCISCGA--CAAECPVSCISEGDSIYVINADECIECGACAGVCPVGAPNPEA 57 >gi|296140639|ref|YP_003647882.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] gi|296028773|gb|ADG79543.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 510 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M +V+T++C C C CPV+C + L + P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDAACTFACPVNCIHPTPDEPGFATAEMLYVDPTTCVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLE--LWLKINSEYATQWP 78 DAI P E ++++IN A P Sbjct: 59 DAIGPAHRLPEEHKVYIEINRSLAAADP 86 >gi|20807413|ref|NP_622584.1| ferredoxin 3 [Thermoanaerobacter tengcongensis MB4] gi|20515935|gb|AAM24188.1| Ferredoxin 3 [Thermoanaerobacter tengcongensis MB4] Length = 74 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + +TE CI C C CPVD YEG+ I P++CIDCG CE CP AIK + Sbjct: 19 VAHYITEECISCGA--CAAECPVDAIYEGDGKYEIDPEKCIDCGACEAVCPTGAIKAE 74 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 18/30 (60%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + EG N +ECI CG C ECPVDAI Sbjct: 13 YKEGRNVAHYITEECISCGACAAECPVDAI 42 >gi|158318907|ref|YP_001511415.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|158114312|gb|ABW16509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 112 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+T CI K C+ CP DC YEG + I+PDEC +CG C CPV A D Sbjct: 1 MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMID 59 >gi|323704227|ref|ZP_08115806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536293|gb|EGB26065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 56 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +++T+ CI C C CPVD +EG + D CIDCG CEP CP AIK + Sbjct: 1 MAHIITDECISCGA--CAAECPVDAIHEGTGKYEVDADTCIDCGACEPVCPTGAIKAE 56 >gi|320161502|ref|YP_004174726.1| putative ferredoxin [Anaerolinea thermophila UNI-1] gi|319995355|dbj|BAJ64126.1| putative ferredoxin [Anaerolinea thermophila UNI-1] Length = 136 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 7/65 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAI 55 MT+V+T C+ + C VCPV+C G+ + I PD CIDCG C PECP +AI Sbjct: 1 MTHVITSLCL--RDGGCATVCPVECIVPGQPVDEWPWYYIDPDTCIDCGACVPECPWEAI 58 Query: 56 KPDTE 60 P+ E Sbjct: 59 FPEDE 63 >gi|299536448|ref|ZP_07049760.1| ferredoxin 7Fe [Lysinibacillus fusiformis ZC1] gi|298727932|gb|EFI68495.1| ferredoxin 7Fe [Lysinibacillus fusiformis ZC1] Length = 78 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 34/55 (61%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+TE C K C++VCPV+C + I PD CIDCG CE CPV+AI Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVMTDTQYVIDPDLCIDCGACELVCPVEAI 55 >gi|307266903|ref|ZP_07548422.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|326389885|ref|ZP_08211449.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|306918060|gb|EFN48315.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|325994153|gb|EGD52581.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 56 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP AIK + Sbjct: 1 MAHYITDECISCGA--CAAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAIKAE 56 >gi|229488683|ref|ZP_04382549.1| NADPH-ferredoxin reductase fpra [Rhodococcus erythropolis SK121] gi|229324187|gb|EEN89942.1| NADPH-ferredoxin reductase fpra [Rhodococcus erythropolis SK121] Length = 543 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Query: 20 VCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE--LWLKI 69 +CPV+C + L I PD CIDCG C ECPV+AI PD E + +L++ Sbjct: 1 MCPVNCIHPTPDEAPFATTEMLYIDPDTCIDCGACVDECPVEAIFPDNELDEDDAPYLQM 60 Query: 70 NSEYATQWP 78 N+ Y + P Sbjct: 61 NASYFEKHP 69 >gi|167037823|ref|YP_001665401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040723|ref|YP_001663708.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X514] gi|256752156|ref|ZP_05493022.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914762|ref|ZP_07132078.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307724004|ref|YP_003903755.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter sp. X513] gi|320116240|ref|YP_004186399.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854963|gb|ABY93372.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter sp. X514] gi|166856657|gb|ABY95065.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748970|gb|EEU62008.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889697|gb|EFK84843.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307581065|gb|ADN54464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X513] gi|319929331|gb|ADV80016.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 56 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP AIK + Sbjct: 1 MAHYITDECISCGA--CTAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAIKAE 56 >gi|85859636|ref|YP_461838.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85722727|gb|ABC77670.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 59 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T++C+ C C +VCP EGE+ I P C DCG C +CP +AI P E Sbjct: 1 MAYVITDDCVACGS--CQDVCPAGAISEGEDKYVIDPAVCTDCGTCAEQCPAEAIVPGEE 58 >gi|288919073|ref|ZP_06413413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288349513|gb|EFC83750.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 113 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+T CI K C++ CP DC Y G + I+PDEC +CG C CPV A D Sbjct: 1 MPFVITSACIDVKDGACLDGGCPADCIYTGGRKMYINPDECTECGACALRCPVGAAMLD 59 >gi|309389874|gb|ADO77754.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Halanaerobium praevalens DSM 2228] Length = 601 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++ E CI C + C +VCPVD E +N I PD CI CG CEPECPVDAI Sbjct: 546 YIIDEEACIGC--SKCSKVCPVDAISGEIKNPFKIDPDVCIACGACEPECPVDAI 598 >gi|289578084|ref|YP_003476711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|297544357|ref|YP_003676659.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527797|gb|ADD02149.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|296842132|gb|ADH60648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 56 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP A+K + Sbjct: 1 MAHYITDECISCGA--CAAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAVKAE 56 >gi|258649091|ref|ZP_05736560.1| conserved domain protein [Prevotella tannerae ATCC 51259] gi|260850732|gb|EEX70601.1| conserved domain protein [Prevotella tannerae ATCC 51259] Length = 56 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++C+ C C+ CP + EGE + +I+PD C+DCG C CP AI P Sbjct: 1 MAYVISDDCVACGT--CIGECPTESISEGEKY-SINPDSCVDCGACADACPTGAIAP 54 >gi|309388856|gb|ADO76736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium praevalens DSM 2228] Length = 56 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V++++CILC C CPV+C EG+ I D+CIDC C CPVDAI Sbjct: 1 MAHVISDDCILCGA--CAPECPVECISEGDTQYEIAADDCIDCAACVSVCPVDAIS 54 >gi|260772955|ref|ZP_05881871.1| ferredoxin [Vibrio metschnikovii CIP 69.14] gi|260612094|gb|EEX37297.1| ferredoxin [Vibrio metschnikovii CIP 69.14] Length = 75 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C PEC AI + E +L++++N+E A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVPECDAQAIFQEDELPDDQKLFIELNAELAEIWPTQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 GKWNGVPNKL 70 >gi|332285866|ref|YP_004417777.1| ferredoxin [Pusillimonas sp. T7-7] gi|330429819|gb|AEC21153.1| ferredoxin [Pusillimonas sp. T7-7] Length = 86 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEYATQ--WPNITT 82 EG NFL I+PDECIDC +C ECP+ AI D E E ++ +N + + W I+ Sbjct: 1 MEGPNFLVINPDECIDCSICVAECPLGAIVSDHEVADEQRHFIDLNRQLSQHPAWKRISR 60 Query: 83 KKESLPSAAKMDGVKQKY 100 K L VK K Sbjct: 61 AKAPLSDHEHWATVKDKL 78 >gi|149925530|ref|ZP_01913794.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149825647|gb|EDM84855.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 80 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAI-KPDTEPG-LELWLKINSEYATQWPNITTKKESLPSAAK 92 I+P+ CIDCGVC PECP AI + D P + +++IN+ A QWP I + KE L A Sbjct: 2 INPEGCIDCGVCIPECPASAIFEEDNVPADQQEFIEINARLAQQWPVIDSAKEPLADADA 61 Query: 93 MDGVKQKYE 101 V K + Sbjct: 62 WVDVTNKKQ 70 >gi|220932451|ref|YP_002509359.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] gi|219993761|gb|ACL70364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] Length = 57 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+++ CI+C C CPVD +G+N I PD CIDCG C CPV+AI Sbjct: 1 MAHVISDECIMCGA--CEPECPVDAISQGDNKYEIDPDTCIDCGACAEVCPVEAIS 54 >gi|310827887|ref|YP_003960244.1| hypothetical protein ELI_2298 [Eubacterium limosum KIST612] gi|308739621|gb|ADO37281.1| conserved domain protein [Eubacterium limosum KIST612] Length = 56 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y+++ CI C CV CPV+ +G++ I+ DEC+DCGVCE CP AI Sbjct: 1 MAYIISGECIACGG--CVTECPVEAISKGDDRYIINADECVDCGVCEETCPTGAI 53 >gi|298251068|ref|ZP_06974872.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297549072|gb|EFH82939.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 86 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 10/83 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ I K CVEVC VDC +E L+I+PDECI+CG E CPV Sbjct: 1 MPYVITQLYIGSKDACCVEVCLVDCIHPTPDEEEFETTEHLSINPDECIECGAUEAACPV 60 Query: 53 DAI--KPDTEPGLELWLKINSEY 73 AI +P ++ IN+ + Sbjct: 61 TAIFEEPLVPQEWRQYIAINANF 83 >gi|319779236|ref|YP_004130149.1| Electron transport complex protein RnfB [Taylorella equigenitalis MCE9] gi|317109260|gb|ADU92006.1| Electron transport complex protein RnfB [Taylorella equigenitalis MCE9] Length = 201 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTE 60 Y++ E+CI C T C++VCPVD ++ + PD C C +C CPVD I+ Sbjct: 82 AYILEEHCIGC--TKCIQVCPVDSIIGANKWMHTVIPDFCTGCELCVLACPVDCIQ--MN 137 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L LW + ++ A + K+ + D + E FS Sbjct: 138 PSLALWTEDDAAIARTRFHARNKRLEDDKILEQDRLNSLSENQFS 182 >gi|225175870|ref|ZP_03729863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168794|gb|EEG77595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 57 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 MT+V+ E CI C C CPVD EG++ I P+ CIDCG C CPVDAI ++ Sbjct: 1 MTHVINEECISCGS--CEPECPVDAITEGDDKYVIDPETCIDCGACAEVCPVDAIHEES 57 >gi|326383750|ref|ZP_08205435.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197514|gb|EGD54703.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 506 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL--ELWLKINSEY 73 +C+ P + + + L I P+ CIDCG C CPVDAI P +++++IN+ Y Sbjct: 2 NCIHPTPEERGFGTSDILHIDPEACIDCGACADACPVDAIFPADRLSARDQIFVEINAGY 61 Query: 74 ATQWPNITT 82 P+I++ Sbjct: 62 YRDHPDISS 70 >gi|312144189|ref|YP_003995635.1| NADH dehydrogenase (quinone) [Halanaerobium sp. 'sapolanicus'] gi|311904840|gb|ADQ15281.1| NADH dehydrogenase (quinone) [Halanaerobium sp. 'sapolanicus'] Length = 600 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 TYV+T E+CI C C +VCPVD E + I D CI CG CEP CPVDAI Sbjct: 544 TYVITTEDCIGCGK--CAKVCPVDAISGEIKGIFEIDEDICIACGACEPVCPVDAI 597 >gi|302391064|ref|YP_003826884.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] gi|302203141|gb|ADL11819.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] Length = 600 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/56 (58%), Positives = 37/56 (66%), Gaps = 6/56 (10%) Query: 3 YVVTE-NCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 YV+ E +CI C T CV+VCPVD EGE A I DECI+CG C ECPVDAI Sbjct: 545 YVIDEEDCIGC--TSCVDVCPVDAI-EGEKKEAHVIDTDECINCGSCVDECPVDAI 597 >gi|312141555|ref|YP_004008891.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|325677227|ref|ZP_08156893.1| ferredoxin-NADP(+) reductase [Rhodococcus equi ATCC 33707] gi|311890894|emb|CBH50213.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|325551924|gb|EGD21620.1| ferredoxin-NADP(+) reductase [Rhodococcus equi ATCC 33707] Length = 546 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 16/84 (19%) Query: 18 VEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWL 67 ++VCPV+C + L I P CIDCG C ECPVDAI + E ++ Sbjct: 1 MDVCPVNCIHPTPDEPEFATTEMLYIDPQTCIDCGACVDECPVDAIFGENELSEAHSMYP 60 Query: 68 KINSEY------ATQWPNITTKKE 85 +IN+ Y WP + + ++ Sbjct: 61 EINAAYFEKHPIGPDWPELASPRK 84 >gi|29347824|ref|NP_811327.1| ferredoxin [Bacteroides thetaiotaomicron VPI-5482] gi|29339726|gb|AAO77521.1| ferredoxin [Bacteroides thetaiotaomicron VPI-5482] Length = 76 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV+ EG+ + +I+PD C DCG C CP +AI P Sbjct: 21 MAYVISDDCIACGT--CIDECPVEAISEGDIY-SINPDVCTDCGTCADVCPSEAIHP 74 >gi|167770016|ref|ZP_02442069.1| hypothetical protein ANACOL_01358 [Anaerotruncus colihominis DSM 17241] gi|167667850|gb|EDS11980.1| hypothetical protein ANACOL_01358 [Anaerotruncus colihominis DSM 17241] Length = 70 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ + C+ C C + CPV EG+ I P CI+CG C +CP +AIKP+ Sbjct: 15 MAYVIGDACVSCGA--CKDTCPVGAISEGDGKYEIDPSACIECGACAADCPSEAIKPE 70 >gi|297619793|ref|YP_003707898.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378770|gb|ADI36925.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 395 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 22/112 (19%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI----- 55 ++ VTE CI C+ CVEVCP D Y E+ + P+ C C +CE CPVDAI Sbjct: 192 SFTVTEECIGCEK--CVEVCPGDMITYNAEDLIVKLPEACPACHLCEQNCPVDAISLEVE 249 Query: 56 ----KPDTEPGLELWLKINSEY----ATQWPN-----ITTKKESLPSAAKMD 94 KP TE GL +W + Y A + P + K LPS K D Sbjct: 250 YGSAKPVTEEGL-VWYEDKCNYCGPCAIKCPTNAINLVNQKGLELPSRTKTD 300 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ C ++CV VCPVD I D+CI C VC CP +AI Sbjct: 128 VTDACVGC--SECVPVCPVDAISIENELAVIDTDKCIYCTVCAQTCPWNAI 176 >gi|164687083|ref|ZP_02211111.1| hypothetical protein CLOBAR_00709 [Clostridium bartlettii DSM 16795] gi|164603968|gb|EDQ97433.1| hypothetical protein CLOBAR_00709 [Clostridium bartlettii DSM 16795] Length = 67 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ CI C C + CP D G++ +I+ DEC+DCG C CP DAI Sbjct: 12 MAYKITDECIACGS--CADECPNDAITAGDDKYSINADECLDCGSCADACPNDAI 64 >gi|332883619|gb|EGK03900.1| hypothetical protein HMPREF9456_01441 [Dysgonomonas mossii DSM 22836] Length = 55 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG+ + I PD C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACGT--CIDECPVNAISEGDIY-KIDPDACTDCGTCADACPTEAIHP 54 >gi|302669638|ref|YP_003829598.1| ferredoxin [Butyrivibrio proteoclasticus B316] gi|302394111|gb|ADL33016.1| ferredoxin [Butyrivibrio proteoclasticus B316] Length = 56 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ CI C C CPV +G+ I + CIDCG C +CPV AI Sbjct: 1 MAYVISDGCISCGS--CAAQCPVSAISQGDTQYVIDANTCIDCGSCAAQCPVSAIS 54 >gi|162453825|ref|YP_001616192.1| ferredoxin/ferredoxin--NADP reductase [Sorangium cellulosum 'So ce 56'] gi|161164407|emb|CAN95712.1| Probable ferredoxin/ferredoxin--NADP reductase [Sorangium cellulosum 'So ce 56'] Length = 107 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 21/94 (22%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY------------EGEN-------FLAIHPDECI 41 M YV+ E C+ T CV VCPVDC + EGE L I P+ CI Sbjct: 1 MAYVIAEPCVATCDTACVPVCPVDCIHGPLAADEISRIPEGERKTRLAGLQLYIDPESCI 60 Query: 42 DCGVCEPECPVDAIKPDTEPGLE--LWLKINSEY 73 CG CE ECPV AI + E E + +IN+ + Sbjct: 61 CCGACENECPVGAIFDEDELPAEWQRYREINARF 94 >gi|291533213|emb|CBL06326.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Megamonas hypermegale ART12/1] Length = 55 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV EGEN I D C++CG C+ CP AI+ Sbjct: 1 MAYKITDDCISCGA--CAGTCPVGAISEGENHYEIDADMCVECGACQAGCPAGAIEA 55 >gi|332829008|gb|EGK01676.1| hypothetical protein HMPREF9455_02031 [Dysgonomonas gadei ATCC BAA-286] Length = 55 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG+ + I PD C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACGT--CIDECPVNAISEGDIY-KIDPDTCTDCGTCADACPTEAIHP 54 >gi|282883119|ref|ZP_06291718.1| Fe-hydrogenase large subunit family protein [Peptoniphilus lacrimalis 315-B] gi|281296931|gb|EFA89428.1| Fe-hydrogenase large subunit family protein [Peptoniphilus lacrimalis 315-B] Length = 505 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +Y VT NC C C+ VCPV+ G++ I D+CI CG C CP +AI Sbjct: 112 SYFVTNNCRKCIAHPCINVCPVNAISMGKDSTIIDKDKCIRCGRCHEACPYNAI 165 >gi|227873643|ref|ZP_03991880.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oribacterium sinus F0268] gi|227840514|gb|EEJ50907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oribacterium sinus F0268] Length = 56 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +VV++ C+ C C VCPV+ EG + PD CIDCG CE CP AI Sbjct: 1 MAHVVSDECVSCGA--CAAVCPVEAISEGPTKYVVDPDTCIDCGACEEPCPTGAIA 54 >gi|169628027|ref|YP_001701676.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium abscessus ATCC 19977] gi|169239994|emb|CAM61022.1| Putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium abscessus] Length = 539 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I C+DCG C CPVDAIKPD+ E +L+INSE+ Sbjct: 2 NCIHPTPDEPDFLKAEMLHIDASACVDCGACVAACPVDAIKPDSTLKEEQLPFLRINSEF 61 >gi|218135337|ref|ZP_03464141.1| hypothetical protein BACPEC_03242 [Bacteroides pectinophilus ATCC 43243] gi|217990722|gb|EEC56733.1| hypothetical protein BACPEC_03242 [Bacteroides pectinophilus ATCC 43243] Length = 56 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++++++C+ C CV CPV+ EG+ + I D CIDCG CE CPV A Sbjct: 1 MAHIISDDCVSCGA--CVAECPVNAISEGDGKMVIDADTCIDCGACEGVCPVGA 52 >gi|255014270|ref|ZP_05286396.1| ferredoxin [Bacteroides sp. 2_1_7] gi|256841512|ref|ZP_05547019.1| ferredoxin [Parabacteroides sp. D13] gi|262383318|ref|ZP_06076454.1| ferredoxin [Bacteroides sp. 2_1_33B] gi|298376261|ref|ZP_06986217.1| hypothetical protein HMPREF0104_02443 [Bacteroides sp. 3_1_19] gi|301309369|ref|ZP_07215311.1| conserved domain protein [Bacteroides sp. 20_3] gi|256737355|gb|EEU50682.1| ferredoxin [Parabacteroides sp. D13] gi|262294216|gb|EEY82148.1| ferredoxin [Bacteroides sp. 2_1_33B] gi|298267298|gb|EFI08955.1| hypothetical protein HMPREF0104_02443 [Bacteroides sp. 3_1_19] gi|300832458|gb|EFK63086.1| conserved domain protein [Bacteroides sp. 20_3] Length = 56 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + +I+P+ C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDKY-SINPEMCTDCGTCADACPTEAIHP 54 >gi|79558|pir||S15879 electron transfer protein - Rhodopseudomonas rutila (fragment) Length = 26 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/26 (88%), Positives = 24/26 (92%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY 27 TYVVTENCI CK+TDCVEVC VDCFY Sbjct: 1 TYVVTENCIKCKYTDCVEVCXVDCFY 26 >gi|302387727|ref|YP_003823549.1| Ferredoxin hydrogenase [Clostridium saccharolyticum WM1] gi|302198355|gb|ADL05926.1| Ferredoxin hydrogenase [Clostridium saccharolyticum WM1] Length = 483 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC LC C C + G + I PD+C +CG C CP +AI T P Sbjct: 94 YVVTDNCQLCMGKACQSSCNFNAISMGRDRAYIDPDKCKECGKCSQACPYNAIADLTRP 152 >gi|255282942|ref|ZP_05347497.1| conserved domain protein [Bryantella formatexigens DSM 14469] gi|255266481|gb|EET59686.1| conserved domain protein [Bryantella formatexigens DSM 14469] Length = 56 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C + CP EG+ I D C++CG CE ECP AI + Sbjct: 1 MAYVISDECVSCGT--CADACPAGAISEGDGKYVIDADACLECGTCESECPTGAISAE 56 >gi|146295776|ref|YP_001179547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409352|gb|ABP66356.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 57 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C GE I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCGA--CESECPVQCISPGEGKYVINEEECISCGACANVCPVDAPKP 55 >gi|306820054|ref|ZP_07453702.1| hydrogenase subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551832|gb|EFM39775.1| hydrogenase subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 503 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 31/54 (57%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TY VT NC C C++VCPV+ G+ I ++CI CG C+ CP +AI Sbjct: 114 TYRVTNNCRKCLAHPCIQVCPVNAISMGQYSTIIDEEKCIRCGRCKDNCPYNAI 167 >gi|302392756|ref|YP_003828576.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302204833|gb|ADL13511.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 55 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y + + C+ C CVE CPVD EG++ I DEC++CG C CPV+AI+ Sbjct: 1 MAYTINDECVDCGT--CVEECPVDAIIEGDDHFEIDEDECVECGNCLDACPVEAIE 54 >gi|41018387|sp|Q00388|VHUB_METVO RecName: Full=Polyferredoxin protein vhuB gi|1747410|emb|CAA43512.1| polyferredoxin [Methanococcus voltae PS] Length = 398 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 25/115 (21%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI----- 55 ++ VTE CI C+ CVEVCP D Y E+ + P+ C C +CE CPVDAI Sbjct: 192 SFTVTEECIGCEK--CVEVCPGDMITYNREDLIVKLPEACPACHLCEQNCPVDAISLEVE 249 Query: 56 ----KPDTEPGLELWLKINSEY----ATQWP--------NITTKKESLPSAAKMD 94 KP TE GL +W + Y A + P I K +LPS K D Sbjct: 250 YGSAKPVTEEGL-VWYEDKCNYCGPCAIKCPLCPTNAINMINQKGLALPSRTKTD 303 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VTE C+ C ++CV VCPVD + I ++CI C VC CP +AI Sbjct: 128 VTEACVGC--SECVPVCPVDAISIEDELAVIDTEKCIYCSVCAQTCPWNAI 176 >gi|296452544|ref|ZP_06894241.1| ferredoxin [Clostridium difficile NAP08] gi|296881044|ref|ZP_06904987.1| ferredoxin [Clostridium difficile NAP07] gi|296258649|gb|EFH05547.1| ferredoxin [Clostridium difficile NAP08] gi|296427910|gb|EFH13814.1| ferredoxin [Clostridium difficile NAP07] Length = 70 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 15 MAYKITDACISCGA--CEAECPVSCISAGDDAYVIDASSCIDCGSCAGACPVDAPQPE 70 >gi|312793989|ref|YP_004026912.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877607|ref|ZP_07737565.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795617|gb|EFR11988.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|312181129|gb|ADQ41299.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 57 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCGA--CESECPVQCISAGDGKYVINEEECISCGACANVCPVDAPKP 55 >gi|73540389|ref|YP_294909.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117802|gb|AAZ60065.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 237 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|160947614|ref|ZP_02094781.1| hypothetical protein PEPMIC_01549 [Parvimonas micra ATCC 33270] gi|158446748|gb|EDP23743.1| hypothetical protein PEPMIC_01549 [Parvimonas micra ATCC 33270] Length = 531 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + + +T+ C+ C T C + CPVDC + L I P +CI CG CE CPV+AI Sbjct: 475 LEFFITDKCVGC--TKCAKACPVDCITGVQKELHVIDPSKCIKCGSCEAACPVNAI 528 >gi|153808350|ref|ZP_01961018.1| hypothetical protein BACCAC_02644 [Bacteroides caccae ATCC 43185] gi|160885009|ref|ZP_02066012.1| hypothetical protein BACOVA_03006 [Bacteroides ovatus ATCC 8483] gi|237712761|ref|ZP_04543242.1| ferredoxin [Bacteroides sp. D1] gi|237718010|ref|ZP_04548491.1| ferredoxin [Bacteroides sp. 2_2_4] gi|253572210|ref|ZP_04849614.1| ferredoxin [Bacteroides sp. 1_1_6] gi|255693219|ref|ZP_05416894.1| conserved domain protein [Bacteroides finegoldii DSM 17565] gi|260174361|ref|ZP_05760773.1| ferredoxin [Bacteroides sp. D2] gi|262409750|ref|ZP_06086288.1| ferredoxin [Bacteroides sp. 2_1_22] gi|294645353|ref|ZP_06723064.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|298387976|ref|ZP_06997524.1| hypothetical protein HMPREF9007_04780 [Bacteroides sp. 1_1_14] gi|298483140|ref|ZP_07001320.1| hypothetical protein HMPREF0106_03607 [Bacteroides sp. D22] gi|299147705|ref|ZP_07040768.1| conserved domain protein [Bacteroides sp. 3_1_23] gi|315922629|ref|ZP_07918869.1| ferredoxin [Bacteroides sp. D2] gi|149129253|gb|EDM20469.1| hypothetical protein BACCAC_02644 [Bacteroides caccae ATCC 43185] gi|156109359|gb|EDO11104.1| hypothetical protein BACOVA_03006 [Bacteroides ovatus ATCC 8483] gi|229447173|gb|EEO52964.1| ferredoxin [Bacteroides sp. D1] gi|229452651|gb|EEO58442.1| ferredoxin [Bacteroides sp. 2_2_4] gi|251838390|gb|EES66477.1| ferredoxin [Bacteroides sp. 1_1_6] gi|260621028|gb|EEX43899.1| conserved domain protein [Bacteroides finegoldii DSM 17565] gi|262352403|gb|EEZ01505.1| ferredoxin [Bacteroides sp. 2_1_22] gi|292639291|gb|EFF57598.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|295084619|emb|CBK66142.1| 4Fe-4S binding domain. [Bacteroides xylanisolvens XB1A] gi|298259242|gb|EFI02118.1| hypothetical protein HMPREF9007_04780 [Bacteroides sp. 1_1_14] gi|298270657|gb|EFI12238.1| hypothetical protein HMPREF0106_03607 [Bacteroides sp. D22] gi|298513888|gb|EFI37774.1| conserved domain protein [Bacteroides sp. 3_1_23] gi|313696504|gb|EFS33339.1| ferredoxin [Bacteroides sp. D2] Length = 56 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV+ EG+ + +I+PD C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACGT--CIDECPVEAISEGDIY-SINPDVCTDCGTCADVCPSEAIHP 54 >gi|291458640|ref|ZP_06598030.1| conserved domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419173|gb|EFE92892.1| conserved domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 56 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV EGE+ + D CIDCG CE CP AI + Sbjct: 1 MAHVISDECVSCGA--CASACPVQAISEGESKYVVDADSCIDCGACEEVCPTGAITAE 56 >gi|254823188|ref|ZP_05228189.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium intracellulare ATCC 13950] Length = 498 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI PDT + +++IN+ + Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDTRLDTNQLPFVEINASF 61 Query: 74 ATQWPNITTKKESLPSAAKM 93 + P + E LP +K+ Sbjct: 62 YPKRP----EGEKLPPTSKL 77 >gi|310658522|ref|YP_003936243.1| iron-sulfur protein [Clostridium sticklandii DSM 519] gi|308825300|emb|CBH21338.1| putative iron-sulfur protein [Clostridium sticklandii] Length = 418 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +NCI CK CV VCPV CF + ++ + ++ + C+ CGVC+ C ++AI+ Sbjct: 288 DNCISCK--KCVSVCPVGCFEIKVFNDKDKVVLNSELCLGCGVCQRVCSINAIE 339 >gi|116624720|ref|YP_826876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227882|gb|ABJ86591.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 83 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 10/63 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C K CV+ CPVDC + ++ L + PD+CIDCG C P CP Sbjct: 1 MAYVITDTCT--KDELCVQACPVDCIHPKQDEAGFAEAPQLYVKPDDCIDCGACVPVCPT 58 Query: 53 DAI 55 ++I Sbjct: 59 NSI 61 >gi|304316617|ref|YP_003851762.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778119|gb|ADL68678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 56 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +++T+ CI C C CPV+ +EG + D CIDCG CE CP A+K + Sbjct: 1 MAHIITDECISCGA--CAAECPVEAIHEGTGKYEVDADTCIDCGACEAVCPTGAVKAE 56 >gi|53711888|ref|YP_097880.1| ferredoxin [Bacteroides fragilis YCH46] gi|52214753|dbj|BAD47346.1| ferredoxin [Bacteroides fragilis YCH46] Length = 56 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++E+CI C C++ CPV EG+ + +I P++C DCG C CP +AI P Sbjct: 1 MAYVISEDCIACGT--CIDECPVGAISEGDIY-SIDPEQCTDCGTCADVCPSEAIHP 54 >gi|299066029|emb|CBJ37210.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CMR15] Length = 228 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|154494844|ref|ZP_02033849.1| hypothetical protein PARMER_03888 [Parabacteroides merdae ATCC 43184] gi|218262678|ref|ZP_03477036.1| hypothetical protein PRABACTJOHN_02715 [Parabacteroides johnsonii DSM 18315] gi|154085394|gb|EDN84439.1| hypothetical protein PARMER_03888 [Parabacteroides merdae ATCC 43184] gi|218223229|gb|EEC95879.1| hypothetical protein PRABACTJOHN_02715 [Parabacteroides johnsonii DSM 18315] Length = 56 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + +I P+ C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDKY-SIDPEMCTDCGTCADACPTEAIHP 54 >gi|254512467|ref|ZP_05124534.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium KLH11] gi|221536178|gb|EEE39166.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium KLH11] Length = 169 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 23 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 73 >gi|83746723|ref|ZP_00943772.1| Formate dehydrogenase (cytochrome b) iron-sulfur subunit [Ralstonia solanacearum UW551] gi|207721373|ref|YP_002251814.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum MolK2] gi|207742649|ref|YP_002259041.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] gi|83726676|gb|EAP73805.1| Formate dehydrogenase (cytochrome b) iron-sulfur subunit [Ralstonia solanacearum UW551] gi|206586532|emb|CAQ17119.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum MolK2] gi|206594043|emb|CAQ60970.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] Length = 228 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|300703376|ref|YP_003744978.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] gi|299071039|emb|CBJ42348.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] Length = 228 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|17547091|ref|NP_520493.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum GMI1000] gi|17429392|emb|CAD16079.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 231 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|229828064|ref|ZP_04454133.1| hypothetical protein GCWU000342_00113 [Shuttleworthia satelles DSM 14600] gi|229792658|gb|EEP28772.1| hypothetical protein GCWU000342_00113 [Shuttleworthia satelles DSM 14600] Length = 490 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TY VT+NC C C+ C EG+ + I P +C +CG C CP +AI T P Sbjct: 95 TYTVTDNCRFCLGKACINSCKFGAISEGDLRMHIDPAKCKECGQCAKNCPYEAIVHLTRP 154 >gi|300690757|ref|YP_003751752.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum PSI07] gi|299077817|emb|CBJ50455.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum PSI07] Length = 228 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|282882984|ref|ZP_06291588.1| ferredoxin [Peptoniphilus lacrimalis 315-B] gi|300813228|ref|ZP_07093596.1| ferredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297191|gb|EFA89683.1| ferredoxin [Peptoniphilus lacrimalis 315-B] gi|300512681|gb|EFK39813.1| ferredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 56 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPVDC +G+ + I+PD+CIDCG C CPV A P+ Sbjct: 1 MAYKITDACIACGA--CQAECPVDCISDGDIY-QINPDQCIDCGSCAGVCPVGAPVPE 55 >gi|311697010|gb|ADP99883.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [marine bacterium HP15] Length = 160 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 14 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 64 >gi|194290506|ref|YP_002006413.1| formate dehydrogenase iron-sulfur subunit [Cupriavidus taiwanensis LMG 19424] gi|193224341|emb|CAQ70352.1| FORMATE DEHYDROGENASE, IRON-SULFUR SUBUNIT [Cupriavidus taiwanensis LMG 19424] Length = 232 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|188587472|ref|YP_001919017.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352159|gb|ACB86429.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 56 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +TE CI C C CP + EGE I D CIDCG C CPVDAI Sbjct: 1 MAYKITEECIKCGA--CEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAI 53 >gi|296109958|ref|YP_003616907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434772|gb|ADG13943.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 151 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C+LC C EVCP +C ++GE + I+ ++C+ CG C CP AIK Sbjct: 15 IYVIKDRCVLCNL--CKEVCPANCIFDGEESVEINKEKCMFCGRCVKVCPTKAIK 67 >gi|160937728|ref|ZP_02085088.1| hypothetical protein CLOBOL_02621 [Clostridium bolteae ATCC BAA-613] gi|158439373|gb|EDP17125.1| hypothetical protein CLOBOL_02621 [Clostridium bolteae ATCC BAA-613] Length = 56 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ C+ C C CPV EG++ I D CIDCG C CP AI Sbjct: 1 MAYVISDACVSCGS--CAAECPVSAISEGDSQYVIDADTCIDCGTCAATCPTGAIS 54 >gi|126727364|ref|ZP_01743199.1| formate dehydrogenase, iron-sulfur subunit, putative [Rhodobacterales bacterium HTCC2150] gi|126703359|gb|EBA02457.1| formate dehydrogenase, iron-sulfur subunit, putative [Rhodobacterales bacterium HTCC2150] Length = 197 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQSEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|255654255|ref|ZP_05399664.1| ferredoxin [Clostridium difficile QCD-23m63] Length = 56 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYKITDACISCGA--CEAECPVSCISAGDDAYVIDASSCIDCGSCAGACPVDAPQPE 56 >gi|94311692|ref|YP_584902.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93355544|gb|ABF09633.1| formate dehydrogenase iron-sulfur subunit [Cupriavidus metallidurans CH34] Length = 226 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + +E Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSEGTF 111 Query: 64 ELWLKIN 70 + K++ Sbjct: 112 GVRGKMD 118 >gi|85704202|ref|ZP_01035305.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. 217] gi|149201547|ref|ZP_01878521.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|85671522|gb|EAQ26380.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. 217] gi|149144595|gb|EDM32624.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 198 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGIVLHSKDLCIGCGYCFYACPFGA 101 >gi|113868891|ref|YP_727380.1| formate dehydrogenase iron-sulfur subunit [Ralstonia eutropha H16] gi|113527667|emb|CAJ94012.1| formate dehydrogenase iron-sulfur subunit [Ralstonia eutropha H16] Length = 225 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|222528526|ref|YP_002572408.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|312623185|ref|YP_004024798.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|222455373|gb|ACM59635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor bescii DSM 6725] gi|312203652|gb|ADQ46979.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 57 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCGA--CESECPVSCISPGDGKYVINEEECISCGACANVCPVDAPKP 55 >gi|145589578|ref|YP_001156175.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047984|gb|ABP34611.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 218 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + +T+ Sbjct: 52 VSVACMHCTDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSLACPFGAPQFETKGAF 111 Query: 64 ELWLKIN 70 K++ Sbjct: 112 GTRSKMD 118 >gi|99080243|ref|YP_612397.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036523|gb|ABF63135.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 197 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|259416768|ref|ZP_05740688.1| formate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] gi|259348207|gb|EEW59984.1| formate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] Length = 197 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|241663767|ref|YP_002982127.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|240865794|gb|ACS63455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 222 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|187929657|ref|YP_001900144.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|309781575|ref|ZP_07676310.1| formate dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|187726547|gb|ACD27712.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|308919680|gb|EFP65342.1| formate dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 222 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGA 102 >gi|56696671|ref|YP_167032.1| formate dehydrogenase, iron-sulfur subunit, putative [Ruegeria pomeroyi DSS-3] gi|56678408|gb|AAV95074.1| formate dehydrogenase, iron-sulfur subunit, putative [Ruegeria pomeroyi DSS-3] Length = 197 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|312128363|ref|YP_003993237.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|312134414|ref|YP_004001752.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774465|gb|ADQ03952.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311778382|gb|ADQ07868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor hydrothermalis 108] Length = 57 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCGA--CESECPVQCISPGDGKYVINEEECISCGACANVCPVDAPKP 55 >gi|197302881|ref|ZP_03167933.1| hypothetical protein RUMLAC_01610 [Ruminococcus lactaris ATCC 29176] gi|197298118|gb|EDY32666.1| hypothetical protein RUMLAC_01610 [Ruminococcus lactaris ATCC 29176] Length = 56 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M V+++ C+ C C CPV EGE+ + D CIDCG CE CPV AI Sbjct: 1 MARVISDECVKCGT--CEAECPVSAISEGEDTYVVDADSCIDCGACEAACPVGAIS 54 >gi|126697745|ref|YP_001086642.1| ferredoxin [Clostridium difficile 630] gi|254973833|ref|ZP_05270305.1| ferredoxin [Clostridium difficile QCD-66c26] gi|255091219|ref|ZP_05320697.1| ferredoxin [Clostridium difficile CIP 107932] gi|255099336|ref|ZP_05328313.1| ferredoxin [Clostridium difficile QCD-63q42] gi|255305170|ref|ZP_05349342.1| ferredoxin [Clostridium difficile ATCC 43255] gi|255312877|ref|ZP_05354460.1| ferredoxin [Clostridium difficile QCD-76w55] gi|255515636|ref|ZP_05383312.1| ferredoxin [Clostridium difficile QCD-97b34] gi|255648730|ref|ZP_05395632.1| ferredoxin [Clostridium difficile QCD-37x79] gi|260681952|ref|YP_003213237.1| ferredoxin [Clostridium difficile CD196] gi|260685550|ref|YP_003216683.1| ferredoxin [Clostridium difficile R20291] gi|306518850|ref|ZP_07405197.1| ferredoxin [Clostridium difficile QCD-32g58] gi|115249182|emb|CAJ66994.1| Ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) [Clostridium difficile] gi|260208115|emb|CBA60382.1| ferredoxin [Clostridium difficile CD196] gi|260211566|emb|CBE01761.1| ferredoxin [Clostridium difficile R20291] Length = 56 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYKITDACISCGA--CEAECPVSCISAGDDAYVIDAGSCIDCGSCAGACPVDAPQPE 56 >gi|114763304|ref|ZP_01442728.1| formate dehydrogenase, iron-sulfur subunit, putative [Pelagibaca bermudensis HTCC2601] gi|114544102|gb|EAU47112.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. HTCC2601] Length = 197 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|149375897|ref|ZP_01893664.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] gi|149359777|gb|EDM48234.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] Length = 202 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A Sbjct: 56 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGA 106 >gi|126739787|ref|ZP_01755478.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. SK209-2-6] gi|126719019|gb|EBA15730.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. SK209-2-6] Length = 197 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|110680099|ref|YP_683106.1| formate dehydrogenase Fe-S subunit [Roseobacter denitrificans OCh 114] gi|163731481|ref|ZP_02138928.1| formate dehydrogenase Fe-S subunit [Roseobacter litoralis Och 149] gi|109456215|gb|ABG32420.1| formate dehydrogenase Fe-S subunit [Roseobacter denitrificans OCh 114] gi|161394935|gb|EDQ19257.1| formate dehydrogenase Fe-S subunit [Roseobacter litoralis Och 149] Length = 198 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 102 >gi|166030704|ref|ZP_02233533.1| hypothetical protein DORFOR_00378 [Dorea formicigenerans ATCC 27755] gi|166029496|gb|EDR48253.1| hypothetical protein DORFOR_00378 [Dorea formicigenerans ATCC 27755] Length = 56 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+ ++CI C C CPV EG+ I+ D CIDCG C +CPV AI Sbjct: 1 MAHVIGDDCISCGS--CEAECPVSAISEGDGKYEINADACIDCGACAAQCPVGAIS 54 >gi|163736978|ref|ZP_02144396.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis BS107] gi|163740599|ref|ZP_02147993.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis 2.10] gi|161386457|gb|EDQ10832.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis 2.10] gi|161389582|gb|EDQ13933.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis BS107] Length = 197 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|126732914|ref|ZP_01748704.1| formate dehydrogenase, iron-sulfur subunit, putative [Sagittula stellata E-37] gi|126706620|gb|EBA05695.1| formate dehydrogenase, iron-sulfur subunit, putative [Sagittula stellata E-37] Length = 197 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|325288816|ref|YP_004264997.1| ferridoxin [Syntrophobotulus glycolicus DSM 8271] gi|324964217|gb|ADY54996.1| ferridoxin [Syntrophobotulus glycolicus DSM 8271] Length = 56 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T++CI C CV+ CP + EG++ I D C DCGVC C +AI Sbjct: 1 MAYVITDDCISCGA--CVDECPANAISEGDSKYVIDADSCADCGVCVDACAANAI 53 >gi|300814458|ref|ZP_07094720.1| 4Fe-4S binding domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511428|gb|EFK38666.1| 4Fe-4S binding domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 505 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +Y VT NC C C+ VCPV+ G++ I ++CI CG C CP +AI Sbjct: 112 SYFVTNNCRKCIAHPCINVCPVNAISMGKDSTIIDKEKCIRCGRCHEACPYNAI 165 >gi|254474808|ref|ZP_05088194.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214029051|gb|EEB69886.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 197 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|308371790|ref|ZP_07667247.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu004] gi|308335377|gb|EFP24228.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu004] Length = 555 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Y Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASY 61 Query: 74 ATQWP 78 + P Sbjct: 62 YPKRP 66 >gi|308231662|ref|ZP_07663905.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu001] gi|308370526|ref|ZP_07666957.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu003] gi|308374124|ref|ZP_07667719.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu006] gi|308375281|ref|ZP_07667984.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu007] gi|308376537|ref|ZP_07668296.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu008] gi|308377537|ref|ZP_07668536.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu009] gi|308378749|ref|ZP_07668818.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu010] gi|308379895|ref|ZP_07669070.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu011] gi|308397494|ref|ZP_07492520.2| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu012] gi|308216365|gb|EFO75764.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu001] gi|308331656|gb|EFP20507.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu003] gi|308342918|gb|EFP31769.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu006] gi|308346746|gb|EFP35597.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu007] gi|308350660|gb|EFP39511.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu008] gi|308355320|gb|EFP44171.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu009] gi|308359259|gb|EFP48110.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu010] gi|308363169|gb|EFP52020.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu011] gi|308366823|gb|EFP55674.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu012] Length = 555 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Y Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASY 61 Query: 74 ATQWP 78 + P Sbjct: 62 YPKRP 66 >gi|307243643|ref|ZP_07525786.1| ferredoxin [Peptostreptococcus stomatis DSM 17678] gi|306493012|gb|EFM65022.1| ferredoxin [Peptostreptococcus stomatis DSM 17678] Length = 55 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV C EG+ + I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIKDSCIACGA--CAAECPVSCISEGDIYT-IDASACIDCGSCAGVCPVDAPQPE 55 >gi|225386321|ref|ZP_03756085.1| hypothetical protein CLOSTASPAR_00064 [Clostridium asparagiforme DSM 15981] gi|225047600|gb|EEG57846.1| hypothetical protein CLOSTASPAR_00064 [Clostridium asparagiforme DSM 15981] Length = 56 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++C+ C C CPV EG++ I D CIDCG C CP AI Sbjct: 1 MAYVINDSCVSCGS--CAAECPVGAISEGDSQYVIDADTCIDCGTCAGTCPTGAIS 54 >gi|73670190|ref|YP_306205.1| hypothetical protein Mbar_A2721 [Methanosarcina barkeri str. Fusaro] gi|72397352|gb|AAZ71625.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 369 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +VV E CI C+ C+++CPV Y I P+ CI CG C CPV AI D E Sbjct: 190 HVVEEKCIGCQ--KCIKICPVGAPYLLGEVSMIDPNICISCGQCMEVCPVGAITIDWEHD 247 Query: 63 LELWLKINSEYA 74 + +L+ +EYA Sbjct: 248 IPNFLECLTEYA 259 >gi|188586058|ref|YP_001917603.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350745|gb|ACB85015.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 70 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C C++ CPVD EGE +I D C +CG C ECP DAI Sbjct: 16 VAFRITEECIACGS--CLDACPVDAIKEGEEIFSITED-CTECGSCVDECPTDAI 67 >gi|84514365|ref|ZP_01001729.1| formate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis SKA53] gi|84511416|gb|EAQ07869.1| formate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis SKA53] Length = 198 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCASVCPVDCFYTTDDAVVLHNKDTCIGCGYCSYACPFGA 101 >gi|260434033|ref|ZP_05788004.1| formate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417861|gb|EEX11120.1| formate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 197 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|315187269|gb|EFU21025.1| ferredoxin [Spirochaeta thermophila DSM 6578] Length = 56 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+T++C+ C C+ CPV+ EG ++ I PD+C DCG C CP +AI P Sbjct: 1 MAYVITDDCVACGT--CLPECPVEAISEGNPYV-IDPDKCTDCGSCAEVCPAEAIHP 54 >gi|255009761|ref|ZP_05281887.1| ferredoxin [Bacteroides fragilis 3_1_12] Length = 56 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + +I P++C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDIY-SIDPEQCTDCGTCADVCPSEAIHP 54 >gi|118591771|ref|ZP_01549167.1| formate dehydrogenase, iron-sulfur subunit, putative [Stappia aggregata IAM 12614] gi|118435764|gb|EAV42409.1| formate dehydrogenase, iron-sulfur subunit, putative [Stappia aggregata IAM 12614] Length = 197 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|313205341|ref|YP_004043998.1| ferredoxin [Paludibacter propionicigenes WB4] gi|312444657|gb|ADQ81013.1| ferredoxin [Paludibacter propionicigenes WB4] Length = 56 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++E+CI C C+ CPV+ EG+ ++ I D C DCG C CP +AI P Sbjct: 1 MAYVISEDCIACGS--CISECPVEAISEGDIYV-IDADVCTDCGTCADVCPSEAISP 54 >gi|260888301|ref|ZP_05899564.1| conserved domain protein [Selenomonas sputigena ATCC 35185] gi|330838372|ref|YP_004412952.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] gi|260861837|gb|EEX76337.1| conserved domain protein [Selenomonas sputigena ATCC 35185] gi|329746136|gb|AEB99492.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] Length = 56 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y ++E CI C C CPV+ EGE+ I ++CI+CG C CPV AI Sbjct: 1 MAYKISEECISCG--SCAGTCPVEAISEGESQYVIDEEKCIECGACAEGCPVSAIS 54 >gi|171463322|ref|YP_001797435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192860|gb|ACB43821.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 252 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 V+ C+ C C+ VCPVDCFY + + +H D CI CG C CP A Sbjct: 86 VSVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSFACPFGA 136 >gi|163794797|ref|ZP_02188767.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159180070|gb|EDP64595.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 197 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFYE + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYESNEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|152981586|ref|YP_001353659.1| formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit) [Janthinobacterium sp. Marseille] gi|151281663|gb|ABR90073.1| formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit) [Janthinobacterium sp. Marseille] Length = 209 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY E + +H D CI CG C CP A Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEEGVVLHDKDICIGCGYCSYACPFGA 102 >gi|317497055|ref|ZP_07955382.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895600|gb|EFV17755.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 481 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT NC C DC++ C G I P +C +CG+C CP +AI + P Sbjct: 92 SYVVTNNCQNCLGKDCIKACRFGAIEPGHTRSRIDPQKCKECGMCAKACPYNAIAHVSRP 151 >gi|149194120|ref|ZP_01871218.1| formate dehydrogenase, iron-sulfur chain [Caminibacter mediatlanticus TB-2] gi|149136073|gb|EDM24551.1| formate dehydrogenase, iron-sulfur chain [Caminibacter mediatlanticus TB-2] Length = 197 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 + V+ C+ C C +VCPVDCFY E+ + +H D+CI CG C CP A Sbjct: 53 FSVSVACMHCTDAPCEQVCPVDCFYIREDGIVLHDKDKCIGCGYCLYACPFGA 105 >gi|229825982|ref|ZP_04452051.1| hypothetical protein GCWU000182_01346 [Abiotrophia defectiva ATCC 49176] gi|229789724|gb|EEP25838.1| hypothetical protein GCWU000182_01346 [Abiotrophia defectiva ATCC 49176] Length = 56 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+ + CI C C VCPV+C EG + C+DCG CE CP AI Sbjct: 1 MAHVINDECISCG--ACASVCPVECISEGSVHYEVDASACVDCGACEESCPTGAI 53 >gi|167767746|ref|ZP_02439799.1| hypothetical protein CLOSS21_02281 [Clostridium sp. SS2/1] gi|167710485|gb|EDS21064.1| hypothetical protein CLOSS21_02281 [Clostridium sp. SS2/1] gi|291558899|emb|CBL37699.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 481 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT NC C DC++ C G I P +C +CG+C CP +AI + P Sbjct: 92 SYVVTNNCQNCLGKDCIKACRFGAIEPGHTRSRIDPQKCKECGMCAKACPYNAIAHVSRP 151 >gi|34541097|ref|NP_905576.1| ferredoxin, 4Fe-4S [Porphyromonas gingivalis W83] gi|188994759|ref|YP_001929011.1| ferredoxin 4Fe-4S [Porphyromonas gingivalis ATCC 33277] gi|34397412|gb|AAQ66475.1| ferredoxin, 4Fe-4S [Porphyromonas gingivalis W83] gi|188594439|dbj|BAG33414.1| ferredoxin 4Fe-4S [Porphyromonas gingivalis ATCC 33277] Length = 56 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG + I D CIDCG C CP +AI P Sbjct: 1 MAYVINDSCVACGS--CIDECPVSAISEG-SIYKIDADTCIDCGTCAAACPSEAIHP 54 >gi|294146722|ref|YP_003559388.1| iron-sulfur protein [Sphingobium japonicum UT26S] gi|292677139|dbj|BAI98656.1| iron-sulfur protein [Sphingobium japonicum UT26S] Length = 837 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTE 60 V +C C+H C+ CP + + G + + CI CG C+ CP I+ P + Sbjct: 698 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFIDETCIGCGNCQRNCPYGVIRMDSVPPKK 757 Query: 61 PGLELWL 67 PGL W+ Sbjct: 758 PGLLSWM 764 >gi|239628874|ref|ZP_04671905.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239519020|gb|EEQ58886.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 55 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++C+ C C CPV EG+ I D CIDCG C CP AI+ Sbjct: 1 MAYVINDSCVSCGS--CAGECPVGAISEGDGKYVIDADTCIDCGTCAATCPTGAIE 54 >gi|302871132|ref|YP_003839768.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor obsidiansis OB47] gi|302573991|gb|ADL41782.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor obsidiansis OB47] Length = 57 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ ++CI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCGA--CESECPVQCISPGDGKYVINEEQCISCGACANVCPVDAPKP 55 >gi|153810606|ref|ZP_01963274.1| hypothetical protein RUMOBE_00987 [Ruminococcus obeum ATCC 29174] gi|149833785|gb|EDM88866.1| hypothetical protein RUMOBE_00987 [Ruminococcus obeum ATCC 29174] gi|295108222|emb|CBL22175.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus obeum A2-162] Length = 57 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+++ C+ C C CP + EG I D C+DCG C CP +AI P Sbjct: 1 MAYVISDECVSCG--TCAAECPAEAISEGAEHFEIDADACLDCGTCADACPTEAIHP 55 >gi|332654077|ref|ZP_08419821.1| conserved domain protein [Ruminococcaceae bacterium D16] gi|332517163|gb|EGJ46768.1| conserved domain protein [Ruminococcaceae bacterium D16] Length = 56 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ CI C C + CPV +G + I+ C+DCG C CP+ AI Sbjct: 1 MAYVISDACISCG--SCADACPVGAIAQGADHYEINAGACLDCGSCADSCPMSAIS 54 >gi|171060397|ref|YP_001792746.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170777842|gb|ACB35981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 214 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY ++ + +H D CI CG C CP A + + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYRTDDGVVLHDKDICIGCGYCSYACPFGAPQFPSNGAF 110 Query: 64 ELWLKIN 70 L K++ Sbjct: 111 GLRGKMD 117 >gi|291280537|ref|YP_003497372.1| 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] gi|290755239|dbj|BAI81616.1| 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] Length = 56 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+T+ C C C + CPV EG+ I PD C DCG C CPVDAI+ Sbjct: 1 MAHVITDECTNCGA--CEDECPVGAISEGDGKRVIDPDTCTDCGACAEVCPVDAIE 54 >gi|260778119|ref|ZP_05887012.1| ferredoxin [Vibrio coralliilyticus ATCC BAA-450] gi|260606132|gb|EEX32417.1| ferredoxin [Vibrio coralliilyticus ATCC BAA-450] Length = 75 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAI-KPDTEPGLE-LWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C EC +AI + D P + L++++N++ A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVDECDANAIFQEDEVPADQTLYVELNAQLAELWPVQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 EKWNGVPDKL 70 >gi|238917868|ref|YP_002931385.1| hypothetical protein EUBELI_01949 [Eubacterium eligens ATCC 27750] gi|238873228|gb|ACR72938.1| Hypothetical protein EUBELI_01949 [Eubacterium eligens ATCC 27750] Length = 56 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++CI C C CPV+ EG I+ D C+DCG C CPV A P Sbjct: 1 MAYVINDDCISCGA--CAAGCPVEAISEGAAHYEINADVCVDCGACAGTCPVGAPNP 55 >gi|18977101|ref|NP_578458.1| mulitcopper oxidase domain-containing protein [Pyrococcus furiosus DSM 3638] gi|18892744|gb|AAL80853.1| multi domain protein containing corrinoid/iron-sulfur region [Pyrococcus furiosus DSM 3638] Length = 388 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHP--DECIDCGVCEPECPVDAIKPDTEPG 62 E C C CV+VCP C+ +GEN + P D+C+ CG C +CP +A++ + G Sbjct: 304 ERCTGCGV--CVDVCPRACYEVDGENHTVMMPRADKCVQCGACIVQCPFEALRFEAPDG 360 >gi|291542068|emb|CBL15178.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus bromii L2-63] Length = 56 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y ++++CI+C C + CP D EG+ I+ D C+DCG C CPV A Sbjct: 1 MAYTISDDCIMCGA--CADNCPCDAISEGDGKYEINADACVDCGSCAEVCPVGA 52 >gi|149920538|ref|ZP_01909005.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] gi|149818582|gb|EDM78028.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] Length = 573 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T+ VT C C + CV +CPV Y+ ++ + D CI C C CP DAI D + Sbjct: 51 TFQVTR-CNHCANPPCVRICPVTAMYQRDDGIVEFDKDACIGCKACMQACPYDAIHIDPD 109 Query: 61 PG 62 G Sbjct: 110 TG 111 >gi|160881872|ref|YP_001560840.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium phytofermentans ISDg] gi|160430538|gb|ABX44101.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium phytofermentans ISDg] Length = 55 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ + CI C C CPV EG + I D C+DCG C CP AI+ Sbjct: 1 MAYVINDGCISCGA--CASECPVGAISEGASHYEIDADACLDCGACASTCPTGAIE 54 >gi|83855227|ref|ZP_00948757.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. NAS-14.1] gi|83941749|ref|ZP_00954211.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. EE-36] gi|83843070|gb|EAP82237.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. NAS-14.1] gi|83847569|gb|EAP85444.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. EE-36] Length = 197 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDDGIVLHSKDLCIGCGYCFYACPFGA 101 >gi|307297192|ref|ZP_07577004.1| cyclic nucleotide-binding protein [Sphingobium chlorophenolicum L-1] gi|306877363|gb|EFN08595.1| cyclic nucleotide-binding protein [Sphingobium chlorophenolicum L-1] Length = 841 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTE 60 V +C C+H C+ CP + + G + + CI CG C+ CP I+ P + Sbjct: 702 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFIDETCIGCGNCQRNCPYGVIRMDSVPPKK 761 Query: 61 PGLELWL 67 PGL W+ Sbjct: 762 PGLLSWM 768 >gi|237654364|ref|YP_002890678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237625611|gb|ACR02301.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 212 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY+ E+ + +H D+CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYKTEDGVVLHDKDKCIGCGYCFYACPFGA 101 >gi|289423315|ref|ZP_06425123.1| conserved domain protein [Peptostreptococcus anaerobius 653-L] gi|289156246|gb|EFD04903.1| conserved domain protein [Peptostreptococcus anaerobius 653-L] Length = 55 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV C +G+ + +I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIKDSCIACGA--CAAECPVSCISDGDIY-SIDASACIDCGSCAGVCPVDAPQPE 55 >gi|124266363|ref|YP_001020367.1| formate dehydrogenase iron-sulfur subunit [Methylibium petroleiphilum PM1] gi|124259138|gb|ABM94132.1| formate dehydrogenase iron-sulfur subunit [Methylibium petroleiphilum PM1] Length = 210 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + T Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSYACPFGAPQFPTNGTF 110 Query: 64 ELWLKIN 70 L K++ Sbjct: 111 GLRGKMD 117 >gi|87198326|ref|YP_495583.1| cyclic nucleotide-binding domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|87134007|gb|ABD24749.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Novosphingobium aromaticivorans DSM 12444] Length = 858 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTE 60 V +C C+H C+ CP + + G + D CI CG C+ CP I+ P + Sbjct: 712 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFINDTCIGCGNCQRNCPYGVIRMDKVPPKK 771 Query: 61 PGLELWL 67 P L WL Sbjct: 772 PSLLSWL 778 >gi|261252043|ref|ZP_05944617.1| ferredoxin [Vibrio orientalis CIP 102891] gi|260938916|gb|EEX94904.1| ferredoxin [Vibrio orientalis CIP 102891] Length = 75 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C EC AI + E L++++N+E A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVDECDAHAIFQEDEVPDDQTLFIELNAELAELWPVQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 EKWNGVPDKL 70 >gi|114567614|ref|YP_754768.1| ferredoxin [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338549|gb|ABI69397.1| ferredoxin [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 58 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M+Y++T+ CI C CV+ CPV+ EGE+ I P+ C +CG C CPV+A P Sbjct: 1 MSYIITDECISCGI--CVDECPVEAISEGEDKFEIDPELCTECGSCADVCPVEAPIP 55 >gi|169333814|ref|ZP_02861007.1| hypothetical protein ANASTE_00200 [Anaerofustis stercorihominis DSM 17244] gi|169259379|gb|EDS73345.1| hypothetical protein ANASTE_00200 [Anaerofustis stercorihominis DSM 17244] Length = 505 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T VT NC C C EVCPVD Y I+ D+C+ CG C CP +AI Sbjct: 110 TVFVTNNCRGCYAHPCSEVCPVDAVYFENGKSVINKDKCVRCGRCVEACPYNAI 163 >gi|323483907|ref|ZP_08089282.1| hypothetical protein HMPREF9474_01031 [Clostridium symbiosum WAL-14163] gi|323693503|ref|ZP_08107710.1| ferredoxin hydrogenase [Clostridium symbiosum WAL-14673] gi|323402745|gb|EGA95068.1| hypothetical protein HMPREF9474_01031 [Clostridium symbiosum WAL-14163] gi|323502460|gb|EGB18315.1| ferredoxin hydrogenase [Clostridium symbiosum WAL-14673] Length = 484 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C CP G N I PD+C +CG C CP +AI P Sbjct: 94 SYTVTDNCRKCMGKACQSSCPFGAITMGNNKAFIDPDKCRECGKCATACPYNAIAHLERP 153 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C +VCPVD Y+ I +CI CG C CP AI T Sbjct: 154 CKKVCPVDAITYDEYGICVIDEKKCIQCGACIHSCPFGAIGSKT 197 >gi|254485944|ref|ZP_05099149.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseobacter sp. GAI101] gi|214042813|gb|EEB83451.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseobacter sp. GAI101] Length = 197 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|188585282|ref|YP_001916827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349969|gb|ACB84239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 229 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVD--CFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPD 58 TY+ T C C H CVEVCP D Y+ E+ L +H ECI C CE CP + + Sbjct: 52 TYIPTL-CNHCDHAPCVEVCPTDPKAMYKTEHGLTLHDSKECIGCRQCEDACPYGVVYFN 110 Query: 59 TEPGLELW 66 +E E W Sbjct: 111 SEKAHEFW 118 >gi|304439744|ref|ZP_07399642.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371731|gb|EFM25339.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 79 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M +++T+ CI C C CPV+C EG + I D+CIDCG C CP A +P+ Sbjct: 24 MAHIITDACIACGA--CQPECPVNCISEGAIY-EIDQDQCIDCGACSSVCPTGAAQPEA 79 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 16/31 (51%), Positives = 18/31 (58%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 FY G I D CI CG C+PECPV+ I Sbjct: 18 FYGGAIMAHIITDACIACGACQPECPVNCIS 48 >gi|95931411|ref|ZP_01314119.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] gi|95132529|gb|EAT14220.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] Length = 165 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ CI C+ CV+VCP + EG + ++ CI C VC+ ECPV+AI+ TE Sbjct: 58 SQMCINCQT--CVDVCPTNAIVEGNDTCVVNATLCIGCQVCDAECPVEAIEEGTE 110 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIK 56 CI C+ D CPV+ EG +A ++ DEC+ CG C ECP +AI Sbjct: 90 CIGCQVCD--AECPVEAIEEGTEIIAPTVYTDECVACGACTNECPTNAIS 137 >gi|253996419|ref|YP_003048483.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8] gi|253983098|gb|ACT47956.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8] Length = 824 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP---DTEP 61 V +C C+H C++ CP D + + D CI CG C+ CP D I+ +P Sbjct: 688 VPTSCRHCEHPHCMKDCPPDAIHRAPHGEVYIDDSCIGCGNCQQNCPYDVIQMAVIQDQP 747 Query: 62 GLELW 66 LW Sbjct: 748 EQSLW 752 >gi|154498692|ref|ZP_02037070.1| hypothetical protein BACCAP_02683 [Bacteroides capillosus ATCC 29799] gi|150272431|gb|EDM99625.1| hypothetical protein BACCAP_02683 [Bacteroides capillosus ATCC 29799] Length = 73 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +C+ C C CPV +G+ I D CIDCG C CPV AI Sbjct: 18 MAYVIGNDCVSCG--SCEGACPVSAISQGDEHYVIDADTCIDCGTCAETCPVGAIA 71 >gi|28212003|ref|NP_782947.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] gi|28204446|gb|AAO36884.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] Length = 494 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVTE C C C+EVCP I+ + C +CG+CE CP +AI P Sbjct: 104 YVVTEACRGCLQHKCMEVCPAGSINRAAGKAYINHETCKECGLCESACPYNAIAEVMRP 162 >gi|149176958|ref|ZP_01855567.1| ferredoxin [Planctomyces maris DSM 8797] gi|148844213|gb|EDL58567.1| ferredoxin [Planctomyces maris DSM 8797] Length = 61 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI-KPDTEP-GLELWLKINSEYATQWPNITTKKESL 87 + I+PDECIDC C PECPV+AI D P + + +IN++ + + P IT KKE L Sbjct: 1 MVYINPDECIDCEACVPECPVEAIFHEDNVPEKWQEYTQINADKSQELPVITEKKEPL 58 >gi|212690928|ref|ZP_03299056.1| hypothetical protein BACDOR_00416 [Bacteroides dorei DSM 17855] gi|237712588|ref|ZP_04543069.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|237726898|ref|ZP_04557379.1| ferredoxin [Bacteroides sp. D4] gi|254882246|ref|ZP_05254956.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|265752267|ref|ZP_06088060.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|294776421|ref|ZP_06741899.1| ferredoxin [Bacteroides vulgatus PC510] gi|319643192|ref|ZP_07997820.1| ferredoxin [Bacteroides sp. 3_1_40A] gi|212666160|gb|EEB26732.1| hypothetical protein BACDOR_00416 [Bacteroides dorei DSM 17855] gi|229435424|gb|EEO45501.1| ferredoxin [Bacteroides dorei 5_1_36/D4] gi|229453909|gb|EEO59630.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|254835039|gb|EET15348.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|263237059|gb|EEZ22529.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|294449747|gb|EFG18269.1| ferredoxin [Bacteroides vulgatus PC510] gi|317385096|gb|EFV66047.1| ferredoxin [Bacteroides sp. 3_1_40A] Length = 55 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV+ EG+ + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACGT--CIDECPVEAISEGDKY-SINPDLCTECGTCADACPSEAIH 53 >gi|156742145|ref|YP_001432274.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233473|gb|ABU58256.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] Length = 565 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 58 CNHCANPPCVRICPVTAMYQRADGIVEFDPKACIGCKACLQACPYDAIYIDPE 110 >gi|148553514|ref|YP_001261096.1| cyclic nucleotide-binding protein [Sphingomonas wittichii RW1] gi|148498704|gb|ABQ66958.1| cyclic nucleotide-binding protein [Sphingomonas wittichii RW1] Length = 801 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V +C C+H C+ CP + G++ D CI CG C+ CP I+ + EP Sbjct: 662 VPTSCRHCEHPHCMADCPPTAIHRGQDGEVYIDDTCIGCGNCQRNCPYGVIRMEKEP 718 >gi|255602894|ref|XP_002537944.1| Ferredoxin 7Fe, putative [Ricinus communis] gi|223514472|gb|EEF24439.1| Ferredoxin 7Fe, putative [Ricinus communis] Length = 87 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 10/63 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ CI CVE+CPV+C G N + I+PD CIDCG C CPV Sbjct: 1 MAYVIAAPCI--ADYSCVEICPVNCISPGPNEEEFDDAEQMYINPDVCIDCGACRDVCPV 58 Query: 53 DAI 55 AI Sbjct: 59 LAI 61 >gi|159043060|ref|YP_001531854.1| formate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae DFL 12] gi|157910820|gb|ABV92253.1| formate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae DFL 12] Length = 198 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTDDAVVLHSKDTCIGCGYCFYACPFGA 101 >gi|224373329|ref|YP_002607701.1| formate dehydrogenase subunit B [Nautilia profundicola AmH] gi|223588850|gb|ACM92586.1| formate dehydrogenase subunit B [Nautilia profundicola AmH] Length = 198 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C C +VCPVDCFY E+ + +H D+CI CG C CP A Sbjct: 59 CMHCTDAPCAQVCPVDCFYIREDGIVLHDKDKCIGCGYCLYACPFGA 105 >gi|92118594|ref|YP_578323.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801488|gb|ABE63863.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 198 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C VCPV+CFY E+ + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTEDGVVLHSKDLCIGCGYCFYACPFGAPQ------- 103 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+++ + + T P A DG K++YEKY Sbjct: 104 --YPKVSNFGSRGKMDKCTFCAGGPEA---DGSKEEYEKY 138 >gi|126176322|ref|YP_001052471.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|153002606|ref|YP_001368287.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160877327|ref|YP_001556643.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|304412797|ref|ZP_07394399.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307461|ref|ZP_07587196.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|125999527|gb|ABN63602.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] gi|151367224|gb|ABS10224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160862849|gb|ABX51383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|304348877|gb|EFM13293.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910249|gb|EFN40682.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|315269532|gb|ADT96385.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 198 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|220927620|ref|YP_002504529.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium cellulolyticum H10] gi|219997948|gb|ACL74549.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium cellulolyticum H10] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + + CI C C CPV C G++ I D CIDCG C CPVDA Sbjct: 1 MAYSINDACISCGA--CESECPVSCITAGDSIYVIDEDTCIDCGACANVCPVDA 52 >gi|319764052|ref|YP_004127989.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|330823673|ref|YP_004386976.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] gi|317118613|gb|ADV01102.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|329309045|gb|AEB83460.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] Length = 206 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTEEGIVLHDKDVCIGCGYCSYACPFGA 101 >gi|134094637|ref|YP_001099712.1| formate dehydrogenase iron-sulfur subunit FdnH [Herminiimonas arsenicoxydans] gi|133738540|emb|CAL61585.1| formate dehydrogenase iron-sulfur subunit [Herminiimonas arsenicoxydans] Length = 209 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSYACPFGAPQFPSNGAF 111 Query: 64 ELWLKIN 70 L K++ Sbjct: 112 GLRGKMD 118 >gi|325295518|ref|YP_004282032.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065966|gb|ADY73973.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 215 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C VCPV G+N++ ++ ++CIDC +C CP AI+P+ Sbjct: 58 QCRQCDDAPCANVCPVGALRFGKNYIEVYEEKCIDCKMCVMVCPFGAIRPE 108 >gi|313889048|ref|ZP_07822706.1| 4Fe-4S binding domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844921|gb|EFR32324.1| 4Fe-4S binding domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 501 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y T+NC C C+ VCPV+ G++ I D+C+ CG C CP AI Sbjct: 112 AYYTTDNCRKCLAHPCINVCPVNAISMGKDRTIIDKDKCVRCGRCHDACPYSAI 165 >gi|331083579|ref|ZP_08332690.1| ferredoxin [Lachnospiraceae bacterium 6_1_63FAA] gi|330403790|gb|EGG83342.1| ferredoxin [Lachnospiraceae bacterium 6_1_63FAA] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T+ C+ C C CPV+ EG++ I D C+DCG C CP +AI Sbjct: 1 MAYVITDECVSCGT--CAGECPVEAISEGDDKYVIDADTCVDCGTCAGVCPTEAI 53 >gi|23014297|ref|ZP_00054120.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 196 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 LSVACMHCSDAPCMAVCPVDCFYQTSDGIVLHNKDLCIGCGYCFYACPFGA 101 >gi|167622043|ref|YP_001672337.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352065|gb|ABZ74678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 559 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V TENC LC CV CP +G + A+H +C+ CG+CE CP I Sbjct: 424 VNTENCTLC--MSCVSTCPTMALTDGGDLPALHFVEQDCVQCGLCETACPEKVI 475 >gi|225023979|ref|ZP_03713171.1| hypothetical protein EIKCOROL_00846 [Eikenella corrodens ATCC 23834] gi|224943004|gb|EEG24213.1| hypothetical protein EIKCOROL_00846 [Eikenella corrodens ATCC 23834] Length = 291 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC CG+C P CPVD I+ Sbjct: 74 LAYIDETACIGC--TACIKACPVDAILGASKLMHTVLADECTGCGLCLPPCPVDCIR 128 >gi|302343580|ref|YP_003808109.1| FAD dependent oxidoreductase [Desulfarculus baarsii DSM 2075] gi|301640193|gb|ADK85515.1| FAD dependent oxidoreductase [Desulfarculus baarsii DSM 2075] Length = 1011 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV E C C CV CP+ F + + I P++C+ CG+C ECP AI+ Sbjct: 939 VVGEMCAAC--LVCVRACPIGVPFINADGYSQIDPEKCLGCGICAAECPAKAIQ 990 >gi|291519873|emb|CBK75094.1| Iron only hydrogenase large subunit, C-terminal domain [Butyrivibrio fibrisolvens 16/4] Length = 492 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +Y VT+NC C C+ C GE + I P +C +CG+C ECP AI Sbjct: 95 SYSVTDNCRFCLGKACLNSCKFGAITPGERRMHIDPTKCKECGMCAKECPYQAI 148 >gi|260437855|ref|ZP_05791671.1| conserved domain protein [Butyrivibrio crossotus DSM 2876] gi|292809880|gb|EFF69085.1| conserved domain protein [Butyrivibrio crossotus DSM 2876] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV++++C+ C C CP G++ I D C+ CG CE CPV AI + Sbjct: 1 MAYVISDSCVSCG--SCAGGCPAGAISLGDSHYEIDADTCLSCGACESACPVGAISAN 56 >gi|298528233|ref|ZP_07015637.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511885|gb|EFI35787.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 643 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V+++C +C +CV VCP + GE I +C CG+C +CP AI EP E Sbjct: 474 VSQDCAVC--LNCVLVCPYNVPRPGEEKAVIDMSQCQACGICAGQCPAAAIDLGLEPRTE 531 Query: 65 L 65 L Sbjct: 532 L 532 >gi|77920137|ref|YP_357952.1| putative ferredoxin [Pelobacter carbinolicus DSM 2380] gi|77546220|gb|ABA89782.1| putative ferredoxin [Pelobacter carbinolicus DSM 2380] Length = 59 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + +TE+CI C D + CP+ E + I D C DCG C CPVDAIK D Sbjct: 4 LAHTITEDCINCGACD--DSCPLGAIEEKGDARVIDADACTDCGACVDSCPVDAIKAD 59 >gi|212637704|ref|YP_002314229.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212559188|gb|ACJ31642.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 195 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|148655927|ref|YP_001276132.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus sp. RS-1] gi|148568037|gb|ABQ90182.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Roseiflexus sp. RS-1] Length = 565 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 52 YFQVTRCNHCANPPCVRICPVTAMYQRSDGIVEFDPRVCIGCKACLQACPYDAIYIDPE 110 >gi|329913103|ref|ZP_08275888.1| Formate dehydrogenase-O, iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] gi|327545421|gb|EGF30633.1| Formate dehydrogenase-O, iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] Length = 208 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 13/96 (13%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C C+ VCPVDCFY + + +H D CI CG C CP A + + L Sbjct: 56 CMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCAYACPFGAPQFPSNGVFGLRG 115 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 K++ K + DG K+++EKY Sbjct: 116 KMD------------KCTFCAGGPEEDGSKEEFEKY 139 >gi|149915678|ref|ZP_01904204.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. AzwK-3b] gi|149810570|gb|EDM70413.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. AzwK-3b] Length = 197 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|33601105|ref|NP_888665.1| formate dehydrogenase iron-sulfur subunit [Bordetella bronchiseptica RB50] gi|33575540|emb|CAE32618.1| formate dehydrogenase iron-sulfur subunit [Bordetella bronchiseptica RB50] Length = 209 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + +E Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQFPSEGAF 110 Query: 64 ELWLKIN 70 + K++ Sbjct: 111 GVRGKMD 117 >gi|33596552|ref|NP_884195.1| formate dehydrogenase iron-sulfur subunit [Bordetella parapertussis 12822] gi|33566321|emb|CAE37234.1| formate dehydrogenase iron-sulfur subunit [Bordetella parapertussis] Length = 209 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + +E Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQFPSEGAF 110 Query: 64 ELWLKIN 70 + K++ Sbjct: 111 GVRGKMD 117 >gi|315925900|ref|ZP_07922105.1| ferredoxin [Pseudoramibacter alactolyticus ATCC 23263] gi|315620721|gb|EFV00697.1| ferredoxin [Pseudoramibacter alactolyticus ATCC 23263] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +++ CI C C + CP + EG ++ I D CIDCG C +CP+ AI P Sbjct: 1 MAYTISDECISCGA--CADQCPTEAISEGSPYV-IDADACIDCGSCADQCPMGAIAP 54 >gi|262276170|ref|ZP_06053979.1| formate dehydrogenase-O iron-sulfur subunit [Grimontia hollisae CIP 101886] gi|262219978|gb|EEY71294.1| formate dehydrogenase-O iron-sulfur subunit [Grimontia hollisae CIP 101886] Length = 201 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCLFACPFGA 103 >gi|163749870|ref|ZP_02157115.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] gi|161330384|gb|EDQ01363.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] Length = 186 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 50 ISVACMHCTDAPCMAVCPANCFYQTEDGLTLHNKDTCIGCGYCLYACPFGA 100 >gi|114561246|ref|YP_748759.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332539|gb|ABI69921.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 198 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|261878703|ref|ZP_06005130.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270334710|gb|EFA45496.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ E+C+ C C++ CPV EG+ + +I PDEC +CG C CP +AI Sbjct: 1 MAYVINEDCVACGT--CIDECPVSAISEGDIY-SIDPDECTECGSCAAVCPQEAIS 53 >gi|169824821|ref|YP_001692432.1| ferredoxin [Finegoldia magna ATCC 29328] gi|297587204|ref|ZP_06945849.1| ferredoxin [Finegoldia magna ATCC 53516] gi|302379640|ref|ZP_07268125.1| ferredoxin [Finegoldia magna ACS-171-V-Col3] gi|303234546|ref|ZP_07321183.1| ferredoxin [Finegoldia magna BVS033A4] gi|167831626|dbj|BAG08542.1| ferredoxin [Finegoldia magna ATCC 29328] gi|297575185|gb|EFH93904.1| ferredoxin [Finegoldia magna ATCC 53516] gi|302312547|gb|EFK94543.1| ferredoxin [Finegoldia magna ACS-171-V-Col3] gi|302494380|gb|EFL54149.1| ferredoxin [Finegoldia magna BVS033A4] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y ++++CI C C CPVDC EG+ + I D CIDCG C CPVDA Sbjct: 1 MAYKISDDCIACGQ--CKPECPVDCISEGDIY-TIDQDACIDCGSCADVCPVDA 51 >gi|309389842|gb|ADO77722.1| Ferredoxin hydrogenase [Halanaerobium praevalens DSM 2228] Length = 471 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+VT+ C C CV CPVD +N I +CI+CG C C +AI + P Sbjct: 111 YIVTDACRNCVAHKCVNACPVDAIVIIQNKAYIDQHKCIECGKCAKTCSYNAILENQRP 169 >gi|119094142|gb|ABL60972.1| anaerobic dehydrogenase iron-sulfur subunit [uncultured marine bacterium HF10_19P19] Length = 197 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCTAVCPVDCFYQTDQGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|121595757|ref|YP_987653.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222111960|ref|YP_002554224.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120607837|gb|ABM43577.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221731404|gb|ACM34224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 206 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTEEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|77918293|ref|YP_356108.1| ferredoxin [Pelobacter carbinolicus DSM 2380] gi|77544376|gb|ABA87938.1| ferredoxin [Pelobacter carbinolicus DSM 2380] Length = 57 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 T+ +TE+CI C C +VCPVD E + C DCG C+ CPVDAIK D Sbjct: 3 THYITEDCINCGA--CADVCPVDAISEKGELHIVDQPTCTDCGACDEVCPVDAIKWD 57 >gi|268680689|ref|YP_003305120.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618720|gb|ACZ13085.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 210 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C +VCPVDCFY E+ + +H E CI CG C CP A Sbjct: 56 ISIACMHCSDAPCSQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGA 106 >gi|119899770|ref|YP_934983.1| formate dehydrogenase iron-sulfur subunit [Azoarcus sp. BH72] gi|119672183|emb|CAL96097.1| probable formate dehydrogenase iron-sulfur subunit [Azoarcus sp. BH72] Length = 202 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY+ E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYKAEGGVVLHDKDLCIGCGYCFFACPFGA 101 >gi|95930556|ref|ZP_01313291.1| thiamine pyrophosphate enzyme-like TPP-binding [Desulfuromonas acetoxidans DSM 684] gi|95133391|gb|EAT15055.1| thiamine pyrophosphate enzyme-like TPP-binding [Desulfuromonas acetoxidans DSM 684] Length = 615 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 5 VTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T +CI C+ CVE CP E + D CI CG C P CPV AIK Sbjct: 552 ITSDCIGCRR--CVEAFECPALSMDEATTMAVLDQDRCIGCGTCIPVCPVHAIK 603 >gi|149176045|ref|ZP_01854662.1| ferredoxin [Planctomyces maris DSM 8797] gi|148845199|gb|EDL59545.1| ferredoxin [Planctomyces maris DSM 8797] Length = 59 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKESL 87 L I P+ECIDC C ECPV+AI + D +++IN+E A + P IT +K L Sbjct: 1 MLYIDPEECIDCDACRTECPVNAIFYEDDVPDQWREYIQINAEMAAKTPPITERKAPL 58 >gi|126734222|ref|ZP_01749969.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126717088|gb|EBA13952.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 197 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|256004045|ref|ZP_05429030.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 2360] gi|281419118|ref|ZP_06250135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum JW20] gi|255991968|gb|EEU02065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 2360] gi|281407267|gb|EFB37528.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum JW20] gi|316941711|gb|ADU75745.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 1313] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ CI C C CPV C G++ I D CI+CG C CPVDA Sbjct: 1 MAYFITDACISCGA--CESECPVSCISPGDSVYVIDADACIECGACANVCPVDA 52 >gi|293401574|ref|ZP_06645717.1| hypothetical protein gi|291305212|gb|EFE46458.1| [Fe] hydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 482 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 17/101 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK---------P 57 N I+ C++ CPVD GE+ LA I ++CI+CG C+ +CP AI+ Sbjct: 148 NAIVETQRPCMKSCPVDAISMGESGLAEIDEEKCINCGACQAKCPFGAIEDMSWMVDVIE 207 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 + + G E++ Q+ N T LP M+G++Q Sbjct: 208 ELKKGTEMYAIFAPAMQGQFDNAT-----LPQV--MEGIRQ 241 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + G + I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGNDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 >gi|322419467|ref|YP_004198690.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320125854|gb|ADW13414.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 56 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M +++++ CI C D + CPV+ E + I D CIDCG C CPV AI P Sbjct: 1 MAHIISDECINCGACD--DSCPVNAISEAGSKRTIAADTCIDCGACVDTCPVSAIAP 55 >gi|306820590|ref|ZP_07454220.1| ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551371|gb|EFM39332.1| ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 56 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ +NCI C C CPV +G+ I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIHDNCISCGA--CEPECPVGAISQGDTQYIIDASACIDCGACASVCPVDAPQPE 56 >gi|119996|sp|P00200|FER_CLOTS RecName: Full=Ferredoxin Length = 55 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +++T+ CI C C CPV+ +EG + D CIDCG CE CP A+K + Sbjct: 1 AHIITDECISCGA--CAAECPVEAIHEGTGKYEVDADTCIDCGACEAVCPTGAVKAE 55 >gi|299143653|ref|ZP_07036733.1| conserved domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518138|gb|EFI41877.1| conserved domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 56 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + ++CI C C CPVDC EG+ + +I+ D+CIDCG C CP A P+ Sbjct: 1 MAYQINDSCIACGA--CKPECPVDCISEGDIY-SINADQCIDCGSCAAVCPTGAPNPE 55 >gi|224536879|ref|ZP_03677418.1| hypothetical protein BACCELL_01755 [Bacteroides cellulosilyticus DSM 14838] gi|224521503|gb|EEF90608.1| hypothetical protein BACCELL_01755 [Bacteroides cellulosilyticus DSM 14838] Length = 56 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG+ + AI P+ C DCG C CP +AI P Sbjct: 1 MAYVINDSCVACGT--CIDECPVGAISEGDIY-AIDPETCTDCGTCADVCPSEAIHP 54 >gi|198276095|ref|ZP_03208626.1| hypothetical protein BACPLE_02282 [Bacteroides plebeius DSM 17135] gi|224026834|ref|ZP_03645200.1| hypothetical protein BACCOPRO_03591 [Bacteroides coprophilus DSM 18228] gi|198270907|gb|EDY95177.1| hypothetical protein BACPLE_02282 [Bacteroides plebeius DSM 17135] gi|224020070|gb|EEF78068.1| hypothetical protein BACCOPRO_03591 [Bacteroides coprophilus DSM 18228] Length = 55 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV EG+ + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDKY-SINPDACTECGTCADVCPSEAIH 53 >gi|125974593|ref|YP_001038503.1| 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium thermocellum ATCC 27405] gi|125714818|gb|ABN53310.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium thermocellum ATCC 27405] Length = 60 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ CI C C CPV C G++ I D CI+CG C CPVDA Sbjct: 5 MAYFITDACISCGA--CESECPVSCISPGDSVYVIDADACIECGACANVCPVDA 56 >gi|283796651|ref|ZP_06345804.1| conserved domain protein [Clostridium sp. M62/1] gi|291076074|gb|EFE13438.1| conserved domain protein [Clostridium sp. M62/1] gi|295092473|emb|CBK78580.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Clostridium cf. saccharolyticum K10] gi|295115344|emb|CBL36191.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [butyrate-producing bacterium SM4/1] Length = 56 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+T+ C+ C C CPV EG+ I CIDCG C CP AI+ Sbjct: 1 MAYVITDTCVSCGA--CAGGCPVGAISEGDGKYEIDAAACIDCGACAGTCPTGAIE 54 >gi|260430249|ref|ZP_05784223.1| formate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] gi|260418721|gb|EEX11977.1| formate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] Length = 197 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDEGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|90418456|ref|ZP_01226368.1| formate dehydrogenase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] gi|90338128|gb|EAS51779.1| formate dehydrogenase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] Length = 198 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|331002353|ref|ZP_08325871.1| ferredoxin [Lachnospiraceae oral taxon 107 str. F0167] gi|330410169|gb|EGG89603.1| ferredoxin [Lachnospiraceae oral taxon 107 str. F0167] Length = 55 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV +G+ I D CIDCG C CP DAI Sbjct: 1 MAYTITDKCVSCGT--CEGECPVSAISQGDTQFNIDADACIDCGTCASVCPTDAI 53 >gi|309389388|gb|ADO77268.1| putative iron-sulfur protein [Halanaerobium praevalens DSM 2228] Length = 416 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C C++ CP+D + N + I D C+ CGVC CP A+ Sbjct: 290 ESCINCDK--CLDACPIDAITKNNNQIKIDQDICLGCGVCVRSCPTKAL 336 >gi|303243458|ref|ZP_07329800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302486019|gb|EFL48941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 151 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 39/67 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C++ C+ +CPV+ Y EN ++ + CI CG+CE CP+ AI + + + L Sbjct: 42 CMQCENAPCMNICPVNAIYLKENIPIVNKERCIGCGMCEIACPIGAIFIEEKVAHKCTLC 101 Query: 69 INSEYAT 75 ++++ T Sbjct: 102 LDTDRIT 108 >gi|90418569|ref|ZP_01226481.1| formate dehydrogenase, iron-sulfur binding subunit [Aurantimonas manganoxydans SI85-9A1] gi|90338241|gb|EAS51892.1| formate dehydrogenase, iron-sulfur binding subunit [Aurantimonas manganoxydans SI85-9A1] Length = 198 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCF+ E+ + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFFTTEDGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|310828126|ref|YP_003960483.1| hypothetical protein ELI_2538 [Eubacterium limosum KIST612] gi|308739860|gb|ADO37520.1| hypothetical protein ELI_2538 [Eubacterium limosum KIST612] Length = 506 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VT+NC C CV VCPV+ Y + I ++C+ CG C CP +AI Sbjct: 113 AFMVTDNCRGCLAHPCVSVCPVNAVYMKDGKSHIDKEKCVRCGRCREACPYEAI 166 >gi|266619566|ref|ZP_06112501.1| conserved domain protein [Clostridium hathewayi DSM 13479] gi|288868851|gb|EFD01150.1| conserved domain protein [Clostridium hathewayi DSM 13479] Length = 56 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ C+ C C CPV EGE I D CI CG C CPV AI Sbjct: 1 MAYVISDACVSCGT--CEGECPVSAISEGEGQYVIDADTCISCGTCAGACPVGAIS 54 >gi|228471147|ref|ZP_04055966.1| conserved domain protein [Porphyromonas uenonis 60-3] gi|228307087|gb|EEK16161.1| conserved domain protein [Porphyromonas uenonis 60-3] Length = 54 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+T++C+ C C++ CPV EG+ + +I D CIDCG C CP AI+ Sbjct: 1 MAHVITDSCVACGT--CIDECPVGAISEGDIY-SIDADTCIDCGACAAACPSGAIE 53 >gi|322371908|ref|ZP_08046450.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Haladaptatus paucihalophilus DX253] gi|320548330|gb|EFW90002.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Haladaptatus paucihalophilus DX253] Length = 594 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C +VCPV +E E+ + P+ CI C C CP DA+ D E Sbjct: 61 CNHCDDSPCTDVCPVTALWEREDGIVDFDPERCIGCKACMQGCPYDALYIDPE 113 >gi|333029771|ref|ZP_08457832.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides coprosuis DSM 18011] gi|332740368|gb|EGJ70850.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides coprosuis DSM 18011] Length = 56 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG+ + +I D C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACGT--CIDECPVEAISEGDIY-SIDADICTDCGTCADVCPSEAIHP 54 >gi|255659932|ref|ZP_05405341.1| conserved domain protein [Mitsuokella multacida DSM 20544] gi|260847803|gb|EEX67810.1| conserved domain protein [Mitsuokella multacida DSM 20544] Length = 56 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y + ++CI C C CPV+ EG I D+C++CG C CPV AI+ Sbjct: 1 MAYKINDDCISCG--SCAATCPVEAISEGAEHYEIDADKCVECGACAAGCPVSAIE 54 >gi|83311771|ref|YP_422035.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82946612|dbj|BAE51476.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 211 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 55 CMHCSDAPCMAVCPVDCFYQTGDGIVLHNKDLCIGCGYCFYACPFGA 101 >gi|51894235|ref|YP_076926.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51857924|dbj|BAD42082.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 291 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +C+ C CV CP D G+ + ++ D CI CG CE CP D I D Sbjct: 84 MWLMQKHSCMHCTDAGCVTACPTDALQYGDYGLVTLNQDACIGCGYCEAACPFDCIHVD 142 >gi|157963947|ref|YP_001503981.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848947|gb|ABV89446.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 195 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY E+ + +H E CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKETCIGCGYCFYACPFGA 103 >gi|85710648|ref|ZP_01041712.1| putative oxidoreductase, Fe-S subunit [Erythrobacter sp. NAP1] gi|85687826|gb|EAQ27831.1| putative oxidoreductase, Fe-S subunit [Erythrobacter sp. NAP1] Length = 808 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 16/107 (14%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK----PDT 59 V +C C+H C+ CP + G + ++I+ + CI CG C+ CP I+ P Sbjct: 669 VPTSCRHCEHPHCMADCPPNAIQRGPDGEVSINAETCIGCGNCKSNCPYGVIRMDPVPPK 728 Query: 60 EPGLELWLKINS-----EYATQW------PNITTKKESLPSAAKMDG 95 +P L WL S E + W P++ K A +DG Sbjct: 729 KPSLLSWLFFGSGPGPGEASYSWRKSHGDPDLAKKAIKCDMCAGIDG 775 >gi|325300099|ref|YP_004260016.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324319652|gb|ADY37543.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] Length = 55 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV EG+ + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDKY-SINPDMCTECGTCADVCPSEAIH 53 >gi|86140241|ref|ZP_01058802.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. MED193] gi|85823044|gb|EAQ43258.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. MED193] Length = 197 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 55 CMHCSDAPCMAVCPVDCFYQTADGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|302390835|ref|YP_003826655.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302202912|gb|ADL11590.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 55 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + VT+ C+ C+ C++ CP D EG + +I DECI+CG+C ECP +AI Sbjct: 1 MAFKVTDECVACET--CLDECPEDAIEEG-DIYSIDEDECIECGICADECPTEAI 52 >gi|300728400|ref|ZP_07061762.1| conserved domain protein [Prevotella bryantii B14] gi|299774319|gb|EFI70949.1| conserved domain protein [Prevotella bryantii B14] Length = 56 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++CI C C++ CPV EGE + +I PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACGT--CIDECPVGAISEGEKY-SIDPDACTECGTCASVCPNEAIA 53 >gi|317502269|ref|ZP_07960441.1| 4Fe-4S ferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|331089012|ref|ZP_08337919.1| ferredoxin [Lachnospiraceae bacterium 3_1_46FAA] gi|316896330|gb|EFV18429.1| 4Fe-4S ferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|330406464|gb|EGG85977.1| ferredoxin [Lachnospiraceae bacterium 3_1_46FAA] Length = 56 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV EG+ I D C+DCG CE CP AI + Sbjct: 1 MAHVISDECVSCGS--CEAECPVGAISEGDGKYEIDADACVDCGACEAACPTGAISAE 56 >gi|239817031|ref|YP_002945941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239803608|gb|ACS20675.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 207 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV CFY E + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVQCFYRTEEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|300853352|ref|YP_003778336.1| ferredoxin [Clostridium ljungdahlii DSM 13528] gi|300433467|gb|ADK13234.1| ferredoxin [Clostridium ljungdahlii DSM 13528] Length = 57 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +TE+C+ C C CP D +G++ I P++CI+CG C CPV A Sbjct: 1 MAYKITEDCVSCGS--CASECPADAISQGDSQFVIDPEKCIECGNCANVCPVGA 52 >gi|253581030|ref|ZP_04858291.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847693|gb|EES75662.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 57 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+++ C+ C C CP + +G+ I D C+DCG C CP +AI P Sbjct: 1 MAYVISDECVSCG--TCESECPAEAISQGDEHYVIDADACLDCGTCADACPTEAIHP 55 >gi|323485418|ref|ZP_08090766.1| hypothetical protein HMPREF9474_02517 [Clostridium symbiosum WAL-14163] gi|323694183|ref|ZP_08108360.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium symbiosum WAL-14673] gi|323401281|gb|EGA93631.1| hypothetical protein HMPREF9474_02517 [Clostridium symbiosum WAL-14163] gi|323501760|gb|EGB17645.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium symbiosum WAL-14673] Length = 56 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+T++C+ C C CPV +G+ I + CIDCG C CP AI+ Sbjct: 1 MAYVITDSCVSCGA--CAGDCPVGAISQGDGKYEIDANTCIDCGSCAGSCPTGAIE 54 >gi|167761785|ref|ZP_02433912.1| hypothetical protein BACSTE_00125 [Bacteroides stercoris ATCC 43183] gi|167700291|gb|EDS16870.1| hypothetical protein BACSTE_00125 [Bacteroides stercoris ATCC 43183] Length = 70 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + +I P+ C +CG C CP +AI P Sbjct: 15 MAYVISDDCIACGT--CIDECPVGAISEGDIY-SIDPETCTECGTCADVCPSEAIHP 68 >gi|313897910|ref|ZP_07831451.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] gi|312957445|gb|EFR39072.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] Length = 482 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + GE+ I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGEDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--EPGLE 64 N I+ C++ CPVD GE+ LA I +CI+CG C+ +CP AI+ + +E Sbjct: 148 NAIVETQRPCMKSCPVDAIRMGEDGLAKIDEAKCINCGACQVKCPFGAIEDMSWMLDVIE 207 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 L K YA P I + +S M +++ Sbjct: 208 LLKKKEEVYAVFAPAIQGQFDSATLPQIMQAMRE 241 >gi|121535881|ref|ZP_01667679.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305546|gb|EAX46490.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 368 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C C VCP + + +I D+CI CG C CPV A+ D L ++L+ Sbjct: 195 CIGC--AKCAAVCPENAITVSDKKASIAVDKCIGCGECLTVCPVKAVGMDWATDLAVFLE 252 Query: 69 INSEYA 74 +EYA Sbjct: 253 RMTEYA 258 >gi|150377582|ref|YP_001314177.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150032129|gb|ABR64244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 198 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTADAVVLHSKDLCIGCGYCFYACPFGA 101 >gi|21228665|ref|NP_634587.1| ferredoxin [Methanosarcina mazei Go1] gi|20907167|gb|AAM32259.1| Ferredoxin [Methanosarcina mazei Go1] Length = 369 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +VV E CI C +CVE+CPV + I+P CI CG C CP +AI + E Sbjct: 190 HVVEEKCIGC--GNCVEICPVGAASLEGDVSRINPGVCISCGQCMEVCPENAIDLNWEQD 247 Query: 63 LELWLKINSEYA 74 + +L+ +EYA Sbjct: 248 IPEFLECMTEYA 259 >gi|309776276|ref|ZP_07671265.1| periplasmic [Fe] hydrogenase 1 [Erysipelotrichaceae bacterium 3_1_53] gi|308915956|gb|EFP61707.1| periplasmic [Fe] hydrogenase 1 [Erysipelotrichaceae bacterium 3_1_53] Length = 482 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + GE+ I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGEDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL- 65 N I+ C++ CPVD GE+ LA I +CI+CG C+ +CP AI+ D L++ Sbjct: 148 NAIVETQRPCMKSCPVDAIRMGEDGLAKIDEAKCINCGACQAKCPFGAIE-DMSWMLDVI 206 Query: 66 -WLKINSE-YATQWPNITTKKESLPSAAKMDGVKQ 98 LK E YA P I + +S M +++ Sbjct: 207 ELLKSGEEVYAVFAPAIQGQFDSATLPQIMQAMRE 241 >gi|260892247|ref|YP_003238344.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] gi|260864388|gb|ACX51494.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] Length = 629 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV+ E+C+ C C + CP E I PD C CG C CPV AI + G Sbjct: 561 YVIGEDCVQCGW--CRDTCPHGAILEKREGFYIEPDLCQRCGACLGVCPVGAIYLEAAGG 618 Query: 63 LELWLK 68 + W K Sbjct: 619 EKPWSK 624 >gi|304382205|ref|ZP_07364713.1| ferredoxin [Prevotella marshii DSM 16973] gi|304336670|gb|EFM02898.1| ferredoxin [Prevotella marshii DSM 16973] Length = 55 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +C+ C C++ CPV EGE + +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGNDCVACGT--CIDECPVSAISEGEIY-SINPDACTECGACAAVCPSEAIS 53 >gi|168702048|ref|ZP_02734325.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Gemmata obscuriglobus UQM 2246] Length = 917 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 ++V +C C+ C+E CPVD + G + + + CI CG+CE CP AI Sbjct: 796 FLVATSCRSCQKPYCMEGCPVDAIHRRGAHLEVVIENHCIGCGLCERNCPYGAI 849 >gi|114706723|ref|ZP_01439623.1| formate dehydrogenase, iron-sulfur subunit, putative [Fulvimarina pelagi HTCC2506] gi|114537671|gb|EAU40795.1| formate dehydrogenase, iron-sulfur subunit, putative [Fulvimarina pelagi HTCC2506] Length = 195 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A Sbjct: 48 ISVACMHCSDAPCMAVCPVDCFYQTADGVVLHSKDLCIGCGYCFYACPFGA 98 >gi|288869832|ref|ZP_06111989.2| Fe-hydrogenase large subunit family protein [Clostridium hathewayi DSM 13479] gi|288869437|gb|EFD01736.1| Fe-hydrogenase large subunit family protein [Clostridium hathewayi DSM 13479] Length = 491 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I PD+C +CG C CP +AI T P Sbjct: 102 YVVTDNCQKCMGKACQNSCNFGAISMGHDRAYIDPDKCKECGKCSQACPYNAIADLTRP 160 >gi|117927911|ref|YP_872462.1| putative glutamate synthase (NADPH) small subunit [Acidothermus cellulolyticus 11B] gi|117648374|gb|ABK52476.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 543 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 NC C +C VCP + E+ AI D C CG+C ECPV AI+ EPG E+ Sbjct: 484 NCFQCD--NCYAVCPDAAVLKVESGHGYAIDLDYCKGCGLCVAECPVGAIRTVPEPGTEV 541 >gi|313904957|ref|ZP_07838328.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] gi|313470214|gb|EFR65545.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] Length = 56 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M V++++C+ C C CPV +G+ I D C+DCG CE CP AI Sbjct: 1 MARVISDDCVSCGT--CEGECPVGAISQGDGKFVIDADSCVDCGACEAACPTGAIS 54 >gi|269798297|ref|YP_003312197.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] gi|282850535|ref|ZP_06259914.1| ferredoxin [Veillonella parvula ATCC 17745] gi|294792160|ref|ZP_06757308.1| conserved domain protein [Veillonella sp. 6_1_27] gi|294794025|ref|ZP_06759162.1| conserved domain protein [Veillonella sp. 3_1_44] gi|269094926|gb|ACZ24917.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] gi|282580028|gb|EFB85432.1| ferredoxin [Veillonella parvula ATCC 17745] gi|294455595|gb|EFG23967.1| conserved domain protein [Veillonella sp. 3_1_44] gi|294457390|gb|EFG25752.1| conserved domain protein [Veillonella sp. 6_1_27] Length = 54 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV C EGE I D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCGS--CASVCPVSCITEGETKYEIG-DACIDCGSCESVCPVSVISAE 54 >gi|119713742|gb|ABL97791.1| ferredoxin [uncultured marine bacterium HF10_29C11] Length = 63 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWP 78 + +L I PDECIDCG C PECPV+AI DT+ E W+ N + P Sbjct: 2 DTYLIIDPDECIDCGACVPECPVEAIFADTDVPDEEEEWIDKNETESADAP 52 >gi|163749866|ref|ZP_02157111.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] gi|161330380|gb|EDQ01359.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] Length = 196 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP DCFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPADCFYRTEDGIVLHNKDTCIGCGYCLYACPFGA 103 >gi|219847452|ref|YP_002461885.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541711|gb|ACL23449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 559 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 58 CNHCANPPCVRICPVTAMYQRTDGIVEFDPKVCIGCKACMQACPYDAIYIDPE 110 >gi|110634791|ref|YP_674999.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110285775|gb|ABG63834.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 198 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTADAVVLHSKDLCIGCGYCFYACPFGA 101 >gi|114049282|ref|YP_739832.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|117922353|ref|YP_871545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|113890724|gb|ABI44775.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] gi|117614685|gb|ABK50139.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 189 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTEDGIVLHNKDACIGCGYCLYACPFGA 103 >gi|299143936|ref|ZP_07037016.1| Fe-hydrogenase large subunit family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518421|gb|EFI42160.1| Fe-hydrogenase large subunit family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 498 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TY VT+NC C C VCPV+ N I +CI CG C+ CP +AI Sbjct: 112 TYYVTDNCRKCMAHPCTNVCPVNAVTIERNRAHIDTTKCIKCGRCKETCPYNAI 165 >gi|145591183|ref|YP_001153185.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282951|gb|ABP50533.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 284 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC+ C C CPV GE + I+ DECI CG CE CP D K ++ Sbjct: 94 NCLHCVAAPCARACPVGAIKVTGEGAVVINRDECIGCGYCETACPYDVPKRGSD 147 >gi|315925580|ref|ZP_07921790.1| Fe-hydrogenase large subunit family protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621121|gb|EFV01092.1| Fe-hydrogenase large subunit family protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 493 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT+NC C C+ C + GE I ++C +CG+C CP +AI P Sbjct: 92 SYVVTDNCQNCLGKACLSACRFGAIHPGEKRSRIDANKCRECGMCATACPYNAIAHLVRP 151 >gi|157831039|pdb|1FCA|A Chain A, Structure Of The Ferredoxin From Clostridium Acidurici: Model At 1.8 Angstroms Resolution Length = 55 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV+ E CI C C CPVD +G + I D CIDCG C CPVDA Sbjct: 1 AYVINEACISCGA--CEPECPVDAISQGGSRYVIDADTCIDCGACAGVCPVDA 51 >gi|325280763|ref|YP_004253305.1| ferredoxin [Odoribacter splanchnicus DSM 20712] gi|324312572|gb|ADY33125.1| ferredoxin [Odoribacter splanchnicus DSM 20712] Length = 56 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C CPV G + I P+ C DCG C CPV+AIK Sbjct: 1 MAYVISDDCISCGT--CEGECPVGAISMGADHYEIDPNACTDCGTCAGVCPVEAIK 54 >gi|294788766|ref|ZP_06754007.1| electron transport complex, RnfABCDGE type, B subunit [Simonsiella muelleri ATCC 29453] gi|294483248|gb|EFG30934.1| electron transport complex, RnfABCDGE type, B subunit [Simonsiella muelleri ATCC 29453] Length = 287 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ CI C T C+ CPVD F+ + DEC CG+C CPVD I D Sbjct: 81 LAYIDESVCIGC--TACIRACPVDAIMGASKFMHTVLTDECTGCGLCVAPCPVDCI--DL 136 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSA-AKMDGVKQKYEK 102 + +L N A+Q P++ + ++ A A+ D Q+ ++ Sbjct: 137 IDVKDEFLPRNHYLASQ-PSLAPRSQAAEHAKARYDNHTQRKQR 179 >gi|150388648|ref|YP_001318697.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948510|gb|ABR47038.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 56 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + E+CI C C CPVD G++ I D CIDCG C CP DA +P Sbjct: 1 MAYKINESCINCGA--CEPECPVDVITAGDDIYVIEEDGCIDCGACANVCPTDAPQP 55 >gi|118444967|ref|YP_878935.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] gi|118135423|gb|ABK62467.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] Length = 494 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCPV + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPVKAITKINGRAYINQDVCRECGMCKQVCPYNAISEVMRP 161 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 17 CVEVCPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C +VCP + C + I+ +ECI CG C CP AI K P +E Sbjct: 162 CKKVCPTEAICISPQDRRAEINDEECISCGACMKACPFGAISDKSYIVPVVEAIKNNKKV 221 Query: 73 YATQWPNITTK 83 YA P IT + Sbjct: 222 YALVAPAITGQ 232 >gi|120600656|ref|YP_965230.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146291443|ref|YP_001181867.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120560749|gb|ABM26676.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145563133|gb|ABP74068.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] gi|319428326|gb|ADV56400.1| formate dehydrogenase, FeS subunit, FdhB [Shewanella putrefaciens 200] Length = 198 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|193213841|ref|YP_001995040.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087318|gb|ACF12593.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 547 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C C + CV +CPV Y+ E+ + + CI C C CP +AI D + Sbjct: 51 YFQVTRCNHCANPPCVRICPVTAMYQREDGIVEFDKNVCIGCKACTQACPYNAIHVDPDS 110 Query: 62 G 62 G Sbjct: 111 G 111 >gi|163858981|ref|YP_001633279.1| formate dehydrogenase, iron-sulfur subunit [Bordetella petrii DSM 12804] gi|163262709|emb|CAP45012.1| Formate dehydrogenase, iron-sulfur subunit [Bordetella petrii] Length = 209 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGA 101 >gi|113972052|ref|YP_735845.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886736|gb|ABI40788.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 189 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHNKDACIGCGYCLYACPFGA 103 >gi|149927499|ref|ZP_01915753.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Limnobacter sp. MED105] gi|149823772|gb|EDM82998.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Limnobacter sp. MED105] Length = 820 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-----PDT 59 + +C C+ C++ CP D E + D CI CG C CP +AI+ P Sbjct: 690 LAHSCRHCEQPHCMKDCPPDAIRRNEKGEVMIADTCIGCGNCAKNCPYNAIELRVKPPPR 749 Query: 60 EPGLELWLKINS 71 + GL WL S Sbjct: 750 KTGLLSWLLFGS 761 >gi|291526378|emb|CBK91965.1| 4Fe-4S binding domain [Eubacterium rectale DSM 17629] gi|291526823|emb|CBK92409.1| 4Fe-4S binding domain [Eubacterium rectale M104/1] Length = 56 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++C+ C C CPV G++ I D C+DCG C CP AI Sbjct: 1 MAYVISDSCVSCGT--CAGECPVGAISAGDSQYVIDADSCLDCGTCAGVCPTGAIS 54 >gi|169335612|ref|ZP_02862805.1| hypothetical protein ANASTE_02032 [Anaerofustis stercorihominis DSM 17244] gi|169258350|gb|EDS72316.1| hypothetical protein ANASTE_02032 [Anaerofustis stercorihominis DSM 17244] Length = 56 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+T+ CI C C CPV EG+ I CIDCG C CP A +P+ Sbjct: 1 MAHVITDECISCGA--CAGECPVGAISEGDGKYEIDAATCIDCGACAGACPTGAAQPE 56 >gi|163848741|ref|YP_001636785.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526688|ref|YP_002571159.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670030|gb|ABY36396.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450567|gb|ACM54833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 559 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 58 CNHCANPPCVRICPVTAMYQRTDGIVEFDPKVCIGCKACLQACPYDAIYIDPE 110 >gi|301064440|ref|ZP_07204859.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441450|gb|EFK05796.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 235 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V TE CI C+ C+E C ++ ++ I+ D CI CG+C CP DA+ + Sbjct: 138 VARVDTETCIGCE--TCLERCQMEALRMEDDHAVINRDRCIGCGLCVSTCPSDALHMERR 195 Query: 61 PG 62 PG Sbjct: 196 PG 197 >gi|187934556|ref|YP_001884438.1| hypothetical protein CLL_A0202 [Clostridium botulinum B str. Eklund 17B] gi|188590020|ref|YP_001919636.1| hypothetical protein CLH_0200 [Clostridium botulinum E3 str. Alaska E43] gi|251778001|ref|ZP_04820921.1| ferredoxin, 4Fe-4S [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|187722709|gb|ACD23930.1| ferredoxin, 4Fe-4S [Clostridium botulinum B str. Eklund 17B] gi|188500301|gb|ACD53437.1| ferredoxin, 4Fe-4S [Clostridium botulinum E3 str. Alaska E43] gi|243082316|gb|EES48206.1| ferredoxin, 4Fe-4S [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 56 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M +V+ ++C+ C C CPVD +G+ + I D CIDCG C CPV A Sbjct: 1 MAFVINDSCVSCGA--CAGECPVDAISQGDAYYVIDADTCIDCGNCANVCPVGA 52 >gi|24375987|ref|NP_720030.1| formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] gi|24350986|gb|AAN57474.1|AE015883_5 formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] Length = 198 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|167630565|ref|YP_001681064.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] gi|167593305|gb|ABZ85053.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] Length = 60 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+++ ++C+ C C CP + EG + I D+CIDCG C CPV A +P+ + Sbjct: 1 MTHIINDDCVNCGA--CAPECPTNAISEGPDKYIIDADKCIDCGACADVCPVGAPRPEGD 58 >gi|113972048|ref|YP_735841.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|114049278|ref|YP_739828.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|117922349|ref|YP_871541.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|113886732|gb|ABI40784.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] gi|113890720|gb|ABI44771.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] gi|117614681|gb|ABK50135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 198 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|108804450|ref|YP_644387.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765693|gb|ABG04575.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 531 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ CVE CPV Y E+ + + D CI C C CP DA+ D E Sbjct: 58 CNHCEDAPCVEACPVTALYVREDGIVDFNWDRCIGCKACTQACPYDALYIDPE 110 >gi|268679442|ref|YP_003303873.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617473|gb|ACZ11838.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 199 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 + + C+ C C +VCPVDCFY E+ + +H E CI CG C CP A Sbjct: 52 FSTSVACMHCTDAPCEQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGA 104 >gi|297538314|ref|YP_003674083.1| cyclic nucleotide-binding protein [Methylotenera sp. 301] gi|297257661|gb|ADI29506.1| cyclic nucleotide-binding protein [Methylotenera sp. 301] Length = 833 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V +C C+H C++ CP D + + D CI CG C+ CP D I+ Sbjct: 693 VPTSCRHCEHPHCMKDCPPDAIHRAPHGEVYIDDSCIGCGNCQQNCPYDVIQ 744 >gi|114320443|ref|YP_742126.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226837|gb|ABI56636.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 196 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A Sbjct: 50 AVSVACMHCTDAPCAAVCPVDCFYTTDDGVVLHDKDLCIGCGYCFYACPFGA 101 >gi|157963943|ref|YP_001503977.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848943|gb|ABV89442.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 189 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|304439876|ref|ZP_07399770.1| periplasmic hydrogenase 1 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371615|gb|EFM25227.1| periplasmic hydrogenase 1 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 501 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T VT+NC C C VCPV+ G++ I D+C+ CG C+ CP AI Sbjct: 112 TIYVTDNCRRCMAHPCTNVCPVNAVKIGKHRAEIDHDKCVKCGRCKDTCPYHAI 165 >gi|164686811|ref|ZP_02210839.1| hypothetical protein CLOBAR_00407 [Clostridium bartlettii DSM 16795] gi|164604201|gb|EDQ97666.1| hypothetical protein CLOBAR_00407 [Clostridium bartlettii DSM 16795] Length = 646 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +TE CI C C VCPVDC E + I + C CG C CPVDAI Sbjct: 221 ITEKCIGCG--ICQRVCPVDCIAGEKKEQRRIDYNRCTHCGRCLSACPVDAI 270 >gi|297564742|ref|YP_003683714.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849191|gb|ADH62206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 83 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKP- 57 M YV+ E CI K C VCP + + L I PD CI G+C CPV AI P Sbjct: 1 MAYVIAEPCIGHKDLSCTVVCPTEAIGGRPSDPQLYIDPDLCIHYGLCASVCPVGAIFPQ 60 Query: 58 -DTEPGLELWLKINSEYATQW 77 D + + N +Y +W Sbjct: 61 EDLPEAWAAYAEGNRDYFRRW 81 >gi|225574426|ref|ZP_03783036.1| hypothetical protein RUMHYD_02495 [Blautia hydrogenotrophica DSM 10507] gi|225038354|gb|EEG48600.1| hypothetical protein RUMHYD_02495 [Blautia hydrogenotrophica DSM 10507] Length = 57 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T+ C+ C C CP + +GE+ I D C+DCG C CP +AI Sbjct: 1 MAYVITDECVSCGT--CEAECPSEAISQGEDKYVIDADACVDCGTCADACPTEAI 53 >gi|167747433|ref|ZP_02419560.1| hypothetical protein ANACAC_02153 [Anaerostipes caccae DSM 14662] gi|317471162|ref|ZP_07930533.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167652795|gb|EDR96924.1| hypothetical protein ANACAC_02153 [Anaerostipes caccae DSM 14662] gi|316901377|gb|EFV23320.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 56 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ CI C C CP EG+ I D C+DCG C CP AI Sbjct: 1 MAYVISDACISCGA--CEGTCPAGAISEGDGQYVIDADTCLDCGACADGCPTGAIS 54 >gi|315452565|ref|YP_004072835.1| putative formate dehydrogenase subunit B [Helicobacter felis ATCC 49179] gi|315131617|emb|CBY82245.1| putative formate dehydrogenase subunit B [Helicobacter felis ATCC 49179] Length = 212 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 I C+H TD C +VCPVDCFY E+ + +H E CI CG C CP A Sbjct: 66 IACQHCTDAPCAQVCPVDCFYIREDGIVLHNKETCIGCGYCLYACPFGA 114 >gi|189464155|ref|ZP_03012940.1| hypothetical protein BACINT_00491 [Bacteroides intestinalis DSM 17393] gi|189437945|gb|EDV06930.1| hypothetical protein BACINT_00491 [Bacteroides intestinalis DSM 17393] Length = 56 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG+ + +I P+ C DCG C CP +AI P Sbjct: 1 MAYVINDSCVACGT--CIDECPVGAISEGDIY-SIDPETCTDCGTCADVCPSEAIHP 54 >gi|167748586|ref|ZP_02420713.1| hypothetical protein ANACAC_03359 [Anaerostipes caccae DSM 14662] gi|167651900|gb|EDR96029.1| hypothetical protein ANACAC_03359 [Anaerostipes caccae DSM 14662] Length = 216 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++TE CI C C +VCP C EG+ + I + C+ CG+C+ +CP AI+ Sbjct: 162 FLITEACIGC--GTCRDVCPQQCISEGKPY-KIQQEHCLHCGLCKEQCPAGAIQ 212 >gi|297616864|ref|YP_003702023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144701|gb|ADI01458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 58 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y +T+ CI C CV+ CPV EG++ I P+ C +CG C CPV+A +P E Sbjct: 1 MAYYITDECISCGV--CVDECPVGAISEGDDKYVIDPELCTECGACAEICPVEAPQPAEE 58 >gi|218133263|ref|ZP_03462067.1| hypothetical protein BACPEC_01128 [Bacteroides pectinophilus ATCC 43243] gi|217992136|gb|EEC58140.1| hypothetical protein BACPEC_01128 [Bacteroides pectinophilus ATCC 43243] Length = 483 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+NC LC C + C G + I P +C +CG C CP +AI P Sbjct: 95 YTVTDNCRLCMMKACKQACKFGAVSMGRDRAYIDPQKCRECGQCAKACPYNAIADLIRP 153 >gi|127510995|ref|YP_001092192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636290|gb|ABO21933.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 196 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGA 103 >gi|91786840|ref|YP_547792.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91696065|gb|ABE42894.1| formate dehydrogenase beta subunit [Polaromonas sp. JS666] Length = 205 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|167622055|ref|YP_001672349.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352077|gb|ABZ74690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|167622051|ref|YP_001672345.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352073|gb|ABZ74686.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|24375991|ref|NP_720034.1| formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] gi|24350990|gb|AAN57478.1|AE015883_9 formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] Length = 189 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|241765326|ref|ZP_04763303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] gi|241364964|gb|EER59889.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] Length = 206 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|300779506|ref|ZP_07089364.1| ferredoxin [Chryseobacterium gleum ATCC 35910] gi|300505016|gb|EFK36156.1| ferredoxin [Chryseobacterium gleum ATCC 35910] Length = 299 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 16/64 (25%) Query: 15 TDCVEVCPVDCFYEGENF---------LAIHPDECIDCGVCEPECPVDAI-------KPD 58 + CV +CPV+ E + L + D CI CGVCEPECP +AI P Sbjct: 29 SHCVNICPVEALTLVEGYVNEILNIRALYVQLDTCIMCGVCEPECPTEAIMLRLSGGSPG 88 Query: 59 TEPG 62 T PG Sbjct: 89 TTPG 92 >gi|291545260|emb|CBL18369.1| 4Fe-4S binding domain [Ruminococcus sp. 18P13] Length = 56 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M YV++++CI+C C CPV G++ I D CI+CG C CPV A Sbjct: 1 MAYVISDDCIMCGA--CESECPVSAISAGDSKYVIDADTCIECGACAGVCPVSA 52 >gi|326202931|ref|ZP_08192798.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium papyrosolvens DSM 2782] gi|325987008|gb|EGD47837.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium papyrosolvens DSM 2782] Length = 56 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +++ CI C C CPV C G++ I D CI+CG C CPVDA Sbjct: 1 MAYSISDACISCGA--CESECPVSCITAGDSVYVIDEDTCIECGACANVCPVDA 52 >gi|7546410|pdb|1DUR|A Chain A, Replacement For 1fdx 2(4fe4s) Ferredoxin From (Now) Peptostreptococcus Asaccharolyticus Length = 55 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 YV+ ++CI C C CPV+C EG + AI D CIDCG C CPV A P+ Sbjct: 1 AYVINDSCIACGA--CKPECPVNCIQEG-SIYAIDADSCIDCGSCASVCPVGAPNPE 54 >gi|296272511|ref|YP_003655142.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096685|gb|ADG92635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 199 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 + Y ++ C+ C C +VCPVDCFY E+ + +H +CI CG C CP A Sbjct: 51 LEYSLSIACMHCTDAPCEKVCPVDCFYIREDGIVLHDKHKCIGCGYCLYACPFGA 105 >gi|317050998|ref|YP_004112114.1| hypothetical protein Selin_0818 [Desulfurispirillum indicum S5] gi|316946082|gb|ADU65558.1| hypothetical protein Selin_0818 [Desulfurispirillum indicum S5] Length = 56 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ C+ C C CPV +G+ I D CIDCG CE CP AI Sbjct: 1 MAYVISDACVNCGA--CEPECPVSAISQGDAIYVIDADTCIDCGACESVCPSGAIS 54 >gi|34733215|gb|AAQ81583.1| formate dehydrogenase subunit B [Sulfurospirillum multivorans] Length = 200 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 C+ C C +VCPVDCFY E+ + +H E CI CG C CP A Sbjct: 58 CMHCTDAPCEQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGA 104 >gi|27380587|ref|NP_772116.1| formate dehydrogenase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] gi|27353752|dbj|BAC50741.1| formate dehydrogenase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] Length = 198 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADGVVLHSKDLCIGCGYCFYACPFGAPQ------- 103 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+ + + + T P A DG K++YEKY Sbjct: 104 --YPKVGNFGSRGKMDKCTYCAGGPEA---DGSKEEYEKY 138 >gi|317470852|ref|ZP_07930233.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316901679|gb|EFV23612.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 216 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++TE CI C C +VCP C EG+ + I + C+ CG+C+ +CP AI+ Sbjct: 162 FLITEACIGC--GTCRDVCPQQCISEGKPY-KIQQEHCLHCGLCKEQCPAGAIQ 212 >gi|254450340|ref|ZP_05063777.1| formate dehydrogenase Fe-S subunit [Octadecabacter antarcticus 238] gi|198264746|gb|EDY89016.1| formate dehydrogenase Fe-S subunit [Octadecabacter antarcticus 238] Length = 197 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYQTADGVVLHSKDLCIGCGYCFYACPFGA 101 >gi|302562520|ref|ZP_07314862.1| ferredoxin-NADP reductase [Streptomyces griseoflavus Tu4000] gi|302480138|gb|EFL43231.1| ferredoxin-NADP reductase [Streptomyces griseoflavus Tu4000] Length = 519 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + L I P CIDCG C CP Sbjct: 1 MAFAITQTC--CNDATCVSVCPVNCIHPTPEERAFGSTEMLHIDPRSCIDCGACADACPA 58 Query: 53 DAIKP--DTEPGLELWLKINSEY 73 DAI P G ++ +IN+ Y Sbjct: 59 DAILPVDRLSEGQRVYERINAAY 81 >gi|255067077|ref|ZP_05318932.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sicca ATCC 29256] gi|255048673|gb|EET44137.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sicca ATCC 29256] Length = 282 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CPVD F+ + DEC CG+C P CPVD I Sbjct: 80 CIGC--TACIRACPVDAIMGASKFMHTVISDECTGCGLCLPPCPVDCI 125 >gi|302336154|ref|YP_003801361.1| Ferredoxin hydrogenase [Olsenella uli DSM 7084] gi|301319994|gb|ADK68481.1| Ferredoxin hydrogenase [Olsenella uli DSM 7084] Length = 539 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C E+CP + I D C+ CG+CE CP AI P Sbjct: 127 YTVTDQCQGCLAHPCREICPKQAISFVDKRAHIDQDLCVQCGMCERTCPYHAIHHHVRP 185 >gi|212637700|ref|YP_002314225.1| formate dehydrogenase, iron-sulfur subunit [Shewanella piezotolerans WP3] gi|212559184|gb|ACJ31638.1| Formate dehydrogenase, iron-sulfur subunit [Shewanella piezotolerans WP3] Length = 189 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISIACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|157377546|ref|YP_001476146.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319920|gb|ABV39018.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 189 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGA 103 >gi|119494011|ref|ZP_01624569.1| 4Fe-4S ferredoxin, iron-sulfur binding [Lyngbya sp. PCC 8106] gi|119452261|gb|EAW33459.1| 4Fe-4S ferredoxin, iron-sulfur binding [Lyngbya sp. PCC 8106] Length = 75 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C ++G ++ I D CIDCG+C CPV+ AI P+ +PGL+ Sbjct: 14 ADCVAACPVACIHDGPGKNAKGTDWYWIDFDTCIDCGICLTVCPVEGAILPEEQPGLQ 71 >gi|170729126|ref|YP_001763152.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814473|gb|ACA89057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 189 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGA 103 >gi|121603744|ref|YP_981073.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120592713|gb|ABM36152.1| formate dehydrogenase beta subunit [Polaromonas naphthalenivorans CJ2] Length = 206 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDICIGCGYCSYACPFGA 101 >gi|261364486|ref|ZP_05977369.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria mucosa ATCC 25996] gi|288567418|gb|EFC88978.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria mucosa ATCC 25996] Length = 282 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CPVD F+ + DEC CG+C P CPVD I Sbjct: 80 CIGC--TACIRACPVDAIMGASKFMHTVISDECTGCGLCLPPCPVDCI 125 >gi|103485838|ref|YP_615399.1| cyclic nucleotide-binding protein [Sphingopyxis alaskensis RB2256] gi|98975915|gb|ABF52066.1| cyclic nucleotide-binding protein [Sphingopyxis alaskensis RB2256] Length = 811 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTE 60 V +C C+H C+ CP + + G + CI CG C CP I+ P + Sbjct: 673 VPTSCRHCEHPHCMADCPPNVIHRGPDGEVFMEPGCIGCGNCMRNCPYGVIRMEAAPPPK 732 Query: 61 PGLELWL 67 PGL WL Sbjct: 733 PGLLSWL 739 >gi|218132108|ref|ZP_03460912.1| hypothetical protein BACEGG_03736 [Bacteroides eggerthii DSM 20697] gi|317477110|ref|ZP_07936351.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|319900101|ref|YP_004159829.1| ferredoxin [Bacteroides helcogenes P 36-108] gi|329956776|ref|ZP_08297345.1| ferredoxin [Bacteroides clarus YIT 12056] gi|329964134|ref|ZP_08301300.1| ferredoxin [Bacteroides fluxus YIT 12057] gi|217985758|gb|EEC52099.1| hypothetical protein BACEGG_03736 [Bacteroides eggerthii DSM 20697] gi|316906653|gb|EFV28366.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|319415132|gb|ADV42243.1| ferredoxin [Bacteroides helcogenes P 36-108] gi|328523815|gb|EGF50902.1| ferredoxin [Bacteroides clarus YIT 12056] gi|328525654|gb|EGF52683.1| ferredoxin [Bacteroides fluxus YIT 12057] Length = 56 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + +I P+ C +CG C CP +AI P Sbjct: 1 MAYVISDDCIACGT--CIDECPVGAISEGDIY-SIDPETCTECGTCADVCPSEAIHP 54 >gi|167630654|ref|YP_001681153.1| ferredoxin (4fe-4s) domain, putative iron-only hydrogenase [Heliobacterium modesticaldum Ice1] gi|167593394|gb|ABZ85142.1| ferredoxin (4fe-4s) domain, putative iron-only hydrogenase [Heliobacterium modesticaldum Ice1] Length = 484 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+E CPV + I+ ++CI+CG C CP AI P Sbjct: 93 FTVTEACRGCIAHPCMEACPVGAISQINRRAIINQEKCIECGRCRQACPYGAITDTQRP 151 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 C++ CPV E+ LA I +CI+CG C CP AI Sbjct: 152 CIKACPVKAISYSEDKLATIDQKKCINCGQCAYRCPFGAI 191 >gi|291548594|emb|CBL24856.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus torques L2-14] Length = 56 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+++ C+ C C CPV EG+ I D C+DCG CE CP AI Sbjct: 1 MAHVISDECVSCGT--CEGECPVGAISEGDGKYEIDADACVDCGACEAACPTGAIS 54 >gi|302342304|ref|YP_003806833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638917|gb|ADK84239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 352 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C++C C + C +D F G++ + ++ D CI CG+C CP +A+K P Sbjct: 275 EACVMCGL--CEDRCQMDVFSPGDDAMILNMDRCIGCGLCVTTCPSEALKLVRRP 327 >gi|157963939|ref|YP_001503973.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848939|gb|ABV89438.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 189 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCDDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|325663172|ref|ZP_08151622.1| hypothetical protein HMPREF0490_02363 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086762|ref|ZP_08335839.1| hypothetical protein HMPREF0987_02142 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470626|gb|EGC73856.1| hypothetical protein HMPREF0490_02363 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409928|gb|EGG89363.1| hypothetical protein HMPREF0987_02142 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 56 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I+ D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCGA--CEAECPVGAISQGADHYEINADACVDCGACAAQCPTGAISAE 56 >gi|302878833|ref|YP_003847397.1| cyclic nucleotide-binding protein [Gallionella capsiferriformans ES-2] gi|302581622|gb|ADL55633.1| cyclic nucleotide-binding protein [Gallionella capsiferriformans ES-2] Length = 796 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V +C C+H C++ CP D + N D CI CG C+ CP I+ Sbjct: 672 VPTSCRHCEHPHCMKDCPPDAIHRSINGEVFISDNCIGCGNCQTNCPYGVIQ 723 >gi|89902029|ref|YP_524500.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89346766|gb|ABD70969.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 210 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCAYACPFGA 101 >gi|89092832|ref|ZP_01165784.1| formate dehydrogenase, iron-sulfur subunit [Oceanospirillum sp. MED92] gi|89082857|gb|EAR62077.1| formate dehydrogenase, iron-sulfur subunit [Oceanospirillum sp. MED92] Length = 201 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY+ ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYQTDDGIVLHNKDLCIGCGYCLYACPFGA 101 >gi|127510999|ref|YP_001092196.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636294|gb|ABO21937.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 189 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGA 103 >gi|302384752|ref|YP_003820574.1| ferredoxin [Clostridium saccharolyticum WM1] gi|302195380|gb|ADL02951.1| ferredoxin [Clostridium saccharolyticum WM1] Length = 56 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M V+++ C+ C C CPV +G++ I D CIDCG CE CP AI Sbjct: 1 MARVISDACVSCGS--CEAECPVSAISQGDSQFVIDADTCIDCGACEGVCPTGAIS 54 >gi|188584741|ref|YP_001916286.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349428|gb|ACB83698.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 597 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 5/54 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 ++ +NCI C T CV+VCPVD GE A I PD+CI CG C +C +AI Sbjct: 544 IIADNCIGC--TACVKVCPVDAI-SGEKKQAHEIDPDKCIGCGECYEKCKFEAI 594 >gi|288957573|ref|YP_003447914.1| formate dehydrogenase iron-sulfur subunit [Azospirillum sp. B510] gi|288909881|dbj|BAI71370.1| formate dehydrogenase iron-sulfur subunit [Azospirillum sp. B510] Length = 225 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCPVDCFY+ + +H D CI CG C CP A Sbjct: 50 TISVACMHCSDAPCKAVCPVDCFYQTAEGVVLHNKDLCIGCGYCFYACPFGA 101 >gi|303257427|ref|ZP_07343440.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] gi|331000028|ref|ZP_08323724.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|302859784|gb|EFL82862.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] gi|329573176|gb|EGG54793.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 306 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVD 53 +C C + CV VCP C YE +++ P++CI C CE CP D Sbjct: 84 RSCFHCTNAGCVTVCPTGCLKYEENGVVSVSPEKCIGCRYCEMACPFD 131 >gi|34556486|ref|NP_906301.1| putative formate dehydrogenase iron-sulfur subunit [Wolinella succinogenes DSM 1740] gi|34557139|ref|NP_906954.1| formate dehydrogenase subunit [Wolinella succinogenes DSM 1740] gi|34557519|ref|NP_907334.1| putative formate dehydrogenase iron-sulfur subunit [Wolinella succinogenes DSM 1740] gi|119888|sp|P27273|FDHB_WOLSU RecName: Full=Formate dehydrogenase iron-sulfur subunit gi|48508|emb|CAA37990.1| formate dehydrogenase [Wolinella succinogenes] gi|34482200|emb|CAE09201.1| PUTATIVE FORMATE DEHYDROGENASE IRON-SULFUR SUBUNIT [Wolinella succinogenes] gi|34482855|emb|CAE09854.1| FORMATE DEHYDROGENASE SUBUNIT [Wolinella succinogenes] gi|34483236|emb|CAE10234.1| PUTATIVE FORMATE DEHYDROGENASE IRON-SULFUR SUBUNIT [Wolinella succinogenes] Length = 200 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 C+ C C +VCPVDCFY + + +H E CI CG C CP A Sbjct: 59 CMHCSDAPCAQVCPVDCFYVRADGIVLHDKEKCIGCGYCLYACPFGA 105 >gi|303241043|ref|ZP_07327553.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetivibrio cellulolyticus CD2] gi|302591468|gb|EFL61206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetivibrio cellulolyticus CD2] Length = 56 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +TE CI C C CPV C G++ I CI+CG C CPVDA K Sbjct: 1 MAYFITEACISCGA--CEPECPVSCISAGDSSYVIDESACIECGACANVCPVDAPK 54 >gi|254457148|ref|ZP_05070576.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207085940|gb|EDZ63224.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 202 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 M + ++ C+ C C +VCPVDCFY E+ + +H E CI C C CP A Sbjct: 53 MEFSLSVACMHCTDAPCEQVCPVDCFYIREDGIVLHNKEVCIGCAYCLYACPFGA 107 >gi|297584891|ref|YP_003700671.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297143348|gb|ADI00106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 230 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C H CV CPV Y+ E+ L +H D CI C C CP I + + + W Sbjct: 60 CNHCDHAPCVMACPVTAMYKDEDGLTLHDADRCIGCKACMTACPYGVISFNKKDPHQYWN 119 Query: 68 KINSEYATQWPNITTKKESLPSAAKMD 94 + N+ W ++ + + +A D Sbjct: 120 ENNA-----WSELSATPKEVQESAGAD 141 >gi|253680886|ref|ZP_04861689.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum D str. 1873] gi|253562735|gb|EES92181.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum D str. 1873] Length = 494 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCP + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPAKAINKINGRAYINQDACRECGMCKQVCPYNAISEVMRP 161 >gi|260888766|ref|ZP_05900029.1| putative 4Fe-4S binding domain protein [Selenomonas sputigena ATCC 35185] gi|330839840|ref|YP_004414420.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Selenomonas sputigena ATCC 35185] gi|260861519|gb|EEX76019.1| putative 4Fe-4S binding domain protein [Selenomonas sputigena ATCC 35185] gi|329747604|gb|AEC00961.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Selenomonas sputigena ATCC 35185] Length = 209 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDTEP 61 + +TE+CI C C VCP C EGE + I C+ CG+C CPV+AI + D+E Sbjct: 152 FRITEDCIGC--GTCAAVCPQQCIAEGEPY-KIAAAHCLHCGLCFESCPVEAIERLDSEA 208 >gi|153854059|ref|ZP_01995392.1| hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] gi|149753441|gb|EDM63372.1| hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] Length = 56 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+ + C+ C C CPV +G + I D C+DCG C +CPV AI Sbjct: 1 MAHVIGDECVSCG--SCEAECPVGAIAQGADHYEIDADACVDCGACAAQCPVGAIS 54 >gi|11499084|ref|NP_070318.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA) [Archaeoglobus fulgidus DSM 4304] gi|6685558|sp|O28783|IORA_ARCFU RecName: Full=Indolepyruvate oxidoreductase subunit iorA; Short=IOR; AltName: Full=Indolepyruvate ferredoxin oxidoreductase subunit alpha gi|2649079|gb|AAB89760.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA) [Archaeoglobus fulgidus DSM 4304] Length = 623 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +TY VTE+C LC CP ++GE ++I C+ C VC CP AIKP Sbjct: 565 VTYKVTEDCTLCMECVNTFACPA-LIFDGEK-VSIDQSLCVGCAVCAKICPNRAIKP 619 >gi|294674586|ref|YP_003575202.1| ferredoxin [Prevotella ruminicola 23] gi|294473796|gb|ADE83185.1| putative ferredoxin [Prevotella ruminicola 23] Length = 55 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++CI C C CPV+ EGE + +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACGT--CQGECPVEAISEGEKY-SINPDLCTECGTCASVCPSEAIS 53 >gi|169335902|ref|ZP_02863095.1| hypothetical protein ANASTE_02337 [Anaerofustis stercorihominis DSM 17244] gi|169258640|gb|EDS72606.1| hypothetical protein ANASTE_02337 [Anaerofustis stercorihominis DSM 17244] Length = 202 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + E CI CK C +CP YE + I + C+ CG+C CPV A++ Sbjct: 149 YFINETCINCKK--CFNLCPQSAIYELNGIMNIKNENCLHCGLCYENCPVKAVE 200 >gi|167629699|ref|YP_001680198.1| ferridoxin/ hydrogenase, putative [Heliobacterium modesticaldum Ice1] gi|167592439|gb|ABZ84187.1| ferridoxin/ hydrogenase, putative [Heliobacterium modesticaldum Ice1] Length = 493 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT C C C+E CPVD + I+ +CI+CG C CP AI P Sbjct: 110 FTVTGACRGCITHRCIEACPVDAIAQINRLAYINQQKCIECGRCHQVCPYGAITDMQRP 168 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 15/70 (21%) Query: 1 MTYVVTENCILCKH----------TD----CVEVCPVDCFYEGENFLA-IHPDECIDCGV 45 + Y+ + CI C TD C++ CPV GE+ +A I P++C+ CG Sbjct: 139 LAYINQQKCIECGRCHQVCPYGAITDMQRPCIKACPVKAIQYGEDKIARIDPNKCVSCGH 198 Query: 46 CEPECPVDAI 55 C CP AI Sbjct: 199 CAVSCPFGAI 208 >gi|158321482|ref|YP_001513989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141681|gb|ABW19993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 56 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++E+CI C C CPV G+ I D CI+CG C CPVDA KP+ Sbjct: 1 MAYKISEDCISCGA--CEPECPVSVISAGDTQYVIDADGCIECGACANVCPVDAPKPE 56 >gi|219669808|ref|YP_002460243.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540068|gb|ACL21807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 162 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 30/59 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T VV C C+ CV+VCP Y+ E + ++ + CI C +C CP +I TE Sbjct: 56 TTVVLTQCRQCEDAPCVKVCPNGSLYQEEGLVKLNRETCIGCKLCARACPFGSITMTTE 114 >gi|331092302|ref|ZP_08341130.1| hypothetical protein HMPREF9477_01773 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401734|gb|EGG81313.1| hypothetical protein HMPREF9477_01773 [Lachnospiraceae bacterium 2_1_46FAA] Length = 56 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCGA--CEAECPVGAISQGADHYEISADACVDCGACAAQCPTGAISAE 56 >gi|319789973|ref|YP_004151606.1| Glutamate synthase (NADPH) [Thermovibrio ammonificans HB-1] gi|317114475|gb|ADU96965.1| Glutamate synthase (NADPH) [Thermovibrio ammonificans HB-1] Length = 505 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ CK CV+ C + Y E+ I H + C++C CE CP DAIK P Sbjct: 20 EKCVRCK--SCVDQCSFNATYYDEDLNRIMNHHENCVNCKRCEAFCPTDAIKVVPNP 74 >gi|292491700|ref|YP_003527139.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291580295|gb|ADE14752.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 195 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCPVDCFY ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCTDAPCAAVCPVDCFYTTDDGIVLHDKDLCIGCGYCFYACPFGA 101 >gi|300856866|ref|YP_003781850.1| putative iron-dependent hydrogenase [Clostridium ljungdahlii DSM 13528] gi|300436981|gb|ADK16748.1| putative iron-dependent hydrogenase [Clostridium ljungdahlii DSM 13528] Length = 495 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + + I+ D C +CG+C+ CP +AI P Sbjct: 104 YRVTEACRGCIQHKCMEVCPAKAISKVDGRAHINQDICKECGMCKKVCPYNAIAEVMRP 162 >gi|254773900|ref|ZP_05215416.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium subsp. avium ATCC 25291] Length = 546 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI PD + +++IN+ + Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDNRLDDKQLPFVEINASF 61 Query: 74 ATQWPNITTKKESLPSAAKM 93 + P + LP +K+ Sbjct: 62 YPKRP----AGQKLPPTSKL 77 >gi|118463699|ref|YP_880273.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium 104] gi|118164986|gb|ABK65883.1| probable ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium 104] Length = 546 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI PD + +++IN+ + Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDNRLDDKQLPFVEINASF 61 Query: 74 ATQWPNITTKKESLPSAAKM 93 + P + LP +K+ Sbjct: 62 YPKRP----AGQKLPPTSKL 77 >gi|313157397|gb|EFR56820.1| ferredoxin [Alistipes sp. HGB5] Length = 55 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T++C+ C C+ CPV+ G+ ++ I P+ CIDCG C CP +AI P+ Sbjct: 1 MAYKITDSCVACGT--CIGECPVEAISAGDIYV-IDPNTCIDCGTCAGVCPSEAIIPE 55 >gi|304317899|ref|YP_003853044.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779401|gb|ADL69960.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 372 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +NC C+ C++ CP D + I PD+CI CG C C DAIKP ++ Sbjct: 191 VGKNCTACQ--TCIKNCPEDAITLVDGKAYIDPDKCIGCGECITMCQYDAIKPQWGTDMD 248 Query: 65 LWLKINSEYA 74 +++ +EYA Sbjct: 249 EFVERMTEYA 258 >gi|330828778|ref|YP_004391730.1| formate dehydrogenase iron-sulfur subunit [Aeromonas veronii B565] gi|328803914|gb|AEB49113.1| Formate dehydrogenase iron-sulfur subunit [Aeromonas veronii B565] Length = 219 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYHTDDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|119776740|ref|YP_929480.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119769240|gb|ABM01811.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] Length = 189 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ E + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEEGIVLHDKDTCIGCGYCLYACPFGA 103 >gi|302340131|ref|YP_003805337.1| Fe-S cluster domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637316|gb|ADK82743.1| Fe-S cluster domain protein [Spirochaeta smaragdinae DSM 11293] Length = 447 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V CI C H C+ CP + + P+ C+DCG C CPVDAI Sbjct: 12 IVEAKCIGCTH--CMLTCPTEAIRVFGGKAHVDPNRCVDCGNCMSVCPVDAI 61 >gi|258514612|ref|YP_003190834.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778317|gb|ACV62211.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 368 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VV E+ CI C C EVCP E I D+CI CG C CPV A D + Sbjct: 189 VVDEDKCIGCG--GCSEVCPEQAITMSEMKANIDLDKCIGCGECLTVCPVKANGIDWQTD 246 Query: 63 LELWLKINSEYA 74 LE +L+ +EY Sbjct: 247 LEAFLERMAEYG 258 >gi|160934887|ref|ZP_02082273.1| hypothetical protein CLOLEP_03762 [Clostridium leptum DSM 753] gi|156866340|gb|EDO59712.1| hypothetical protein CLOLEP_03762 [Clostridium leptum DSM 753] Length = 56 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +++ CI C C CPV+ EG+ I D CIDCG C CPV A Sbjct: 1 MAYKISDECISCGA--CEAGCPVNAISEGDGKYVIDADTCIDCGACADACPVGA 52 >gi|15899475|ref|NP_344080.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus solfataricus P2] gi|13816091|gb|AAK42870.1| Molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus solfataricus P2] Length = 409 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 10 ILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 61 IACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 115 >gi|254490549|ref|ZP_05103735.1| hypothetical protein MDMS009_881 [Methylophaga thiooxidans DMS010] gi|224464293|gb|EEF80556.1| hypothetical protein MDMS009_881 [Methylophaga thiooxydans DMS010] Length = 63 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 45 VCEPECPVDAI-KPDTEPGLEL-WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +CEPECP +AI D P ++ +L+IN E + WP I+ KK+ LP A + DG K Sbjct: 1 MCEPECPAEAIFSEDDLPDEQMEFLQINEELSQVWPVISEKKDPLPDAEEWDGKSDK 57 >gi|157377550|ref|YP_001476150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319924|gb|ABV39022.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 196 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 57 CMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGA 103 >gi|149920708|ref|ZP_01909173.1| putative carbamoyl transferase [Plesiocystis pacifica SIR-1] gi|149818495|gb|EDM77944.1| putative carbamoyl transferase [Plesiocystis pacifica SIR-1] Length = 1178 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Query: 17 CVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C +CPVD F +G + + PD CI C VC CP DA++P P Sbjct: 261 CERLCPVD-FLDGLGQPRAGLEPDACIRCQVCVEACPTDAMRPVYGP 306 >gi|291522007|emb|CBK80300.1| 4Fe-4S binding domain [Coprococcus catus GD/7] Length = 56 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C CPV EG+ I + C+DCG C CP +AI + Sbjct: 1 MAYVISDACVSCGT--CAGECPVGAISEGDGKYVIDANACLDCGSCAGACPTEAISQE 56 >gi|117619514|ref|YP_857564.1| formate dehydrogenase iron-sulfur subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560921|gb|ABK37869.1| formate dehydrogenase iron-sulfur subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 207 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYHTDDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|51246839|ref|YP_066723.1| formate dehydrogenase, iron-sulfur chain [Desulfotalea psychrophila LSv54] gi|50877876|emb|CAG37716.1| probable formate dehydrogenase, iron-sulfur chain [Desulfotalea psychrophila LSv54] Length = 188 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 C+ C C +VCPVDCFY E+ + +H E CI CG C CP A Sbjct: 60 CMHCADAPCQKVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGA 106 >gi|310659593|ref|YP_003937314.1| ferredoxin [Clostridium sticklandii DSM 519] gi|322510027|sp|P80168|FER_CLOSD RecName: Full=Ferredoxin gi|308826371|emb|CBH22409.1| Ferredoxin [Clostridium sticklandii] Length = 56 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV+ G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYVINDSCISCGA--CEPECPVNAITAGDDKYVIDAATCIDCGACAGVCPVDAPQPE 56 >gi|299135397|ref|ZP_07028587.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298589805|gb|EFI50010.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 198 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 ISMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAPQ------- 103 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+ + + + T P A DG K++YEKY Sbjct: 104 --YPKLGNFGSRGKMDKCTFCAGGPEA---DGSKEEYEKY 138 >gi|268610306|ref|ZP_06144033.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 56 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y+++++CI C C CPV EG+ I D C++CG C CPV A Sbjct: 1 MAYIISDDCISCGA--CAGECPVSAISEGDGKYQIDADACVECGACAGVCPVGA 52 >gi|167622047|ref|YP_001672341.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352069|gb|ABZ74682.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 195 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY + + +H E CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDEGIVLHNKETCIGCGYCLYACPFGA 103 >gi|210620552|ref|ZP_03292100.1| hypothetical protein CLOHIR_00043 [Clostridium hiranonis DSM 13275] gi|210155266|gb|EEA86272.1| hypothetical protein CLOHIR_00043 [Clostridium hiranonis DSM 13275] Length = 56 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ C+ C C CPV EG++ I D C++CG C CPV A Sbjct: 1 MAYKITDACVSCGA--CAAECPVGAISEGDSIYVIDADACVECGACAEACPVGA 52 >gi|319794274|ref|YP_004155914.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315596737|gb|ADU37803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 206 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV CFY + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVQCFYRTDEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|307265233|ref|ZP_07546791.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919677|gb|EFN49893.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] Length = 513 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + I D+CI+CG C+ CP +AI P Sbjct: 100 YRVTEACRGCLAHKCIEVCPRGAISIRDKRAHIDYDKCIECGRCKDVCPYNAISDTLRP 158 >gi|225017215|ref|ZP_03706407.1| hypothetical protein CLOSTMETH_01141 [Clostridium methylpentosum DSM 5476] gi|224949990|gb|EEG31199.1| hypothetical protein CLOSTMETH_01141 [Clostridium methylpentosum DSM 5476] Length = 57 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y++ ++CI C C CPV+ EG+ I D CI+CG C CPV+A P+ Sbjct: 1 MAYIINDDCISCGA--CEAECPVNAITEGDGKYCIDKDTCIECGACAGVCPVNAPNPEA 57 >gi|120600660|ref|YP_965234.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146291439|ref|YP_001181863.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120560753|gb|ABM26680.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145563129|gb|ABP74064.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] gi|319428330|gb|ADV56404.1| formate dehydrogenase, FeS subunit, FdhB [Shewanella putrefaciens 200] Length = 189 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGA 103 >gi|78777018|ref|YP_393333.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] gi|78497558|gb|ABB44098.1| Formate dehydrogenase beta subunit [Sulfurimonas denitrificans DSM 1251] Length = 196 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C +VCPVDCFY + + +H D+CI CG C CP A Sbjct: 57 MSMACMHCTDAPCQQVCPVDCFYIRADGIVLHDKDKCIGCGYCLFACPFGA 107 >gi|291165831|gb|EFE27878.1| Fe-hydrogenase large subunit family protein [Filifactor alocis ATCC 35896] Length = 498 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT C C C++VCPV GE I ++CI CG C+ CP +AI Sbjct: 116 VTSTCRQCMAHPCIQVCPVGAITMGETQTHIDKEKCIKCGKCKEACPYNAI 166 >gi|154149965|ref|YP_001403583.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998517|gb|ABS54940.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 118 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E CI C+ C EVCP F EGE + +P C++CG C CPV AI + G Sbjct: 14 AEKCINCRR--CTEVCPHGVFAEGEKTAVLGNPRACMECGACAKNCPVQAISVQSGVGCA 71 Query: 65 LWL 67 + Sbjct: 72 SAM 74 >gi|170729130|ref|YP_001763156.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814477|gb|ACA89061.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 196 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP DCFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPADCFYRTDDGIVLHNKDTCIGCGYCLYACPFGA 103 >gi|257064392|ref|YP_003144064.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792045|gb|ACV22715.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 398 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+E C C +N + + P +CI CG C CP DAI P EL Sbjct: 36 CLESCAGGCIGYEDNEITVDPTKCIGCGTCATVCPTDAIHPKKPTDAEL 84 >gi|220925126|ref|YP_002500428.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949733|gb|ACL60125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 198 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGA 101 >gi|261601245|gb|ACX90848.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 398 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 10 ILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 50 IACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|313887884|ref|ZP_07821563.1| ferredoxin [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846050|gb|EFR33432.1| ferredoxin [Peptoniphilus harei ACS-146-V-Sch2b] Length = 56 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV C EG+ + +I +CIDCG C CPV A P+ Sbjct: 1 MAYVINDSCIACGA--CQPECPVGCISEGDIY-SIDESQCIDCGSCAAVCPVGAPNPE 55 >gi|288800744|ref|ZP_06406201.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332205|gb|EFC70686.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] Length = 55 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++ +C+ C C++ CPV+ EG + +I+PD C +CG C CP ++I Sbjct: 1 MAYVISNDCVACGT--CIDECPVEAISEG-SIYSINPDACTECGSCAAVCPTESIS 53 >gi|240137055|ref|YP_002961524.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] gi|240007021|gb|ACS38247.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] Length = 665 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLC--LSCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELW 66 E W Sbjct: 565 EAW 567 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C++VCP + +AI P C CG C CP A P Sbjct: 258 LCAHSRSRITGCTRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPA 317 Query: 63 LELWLKINS 71 L ++ S Sbjct: 318 DALMRRLRS 326 >gi|167756634|ref|ZP_02428761.1| hypothetical protein CLORAM_02171 [Clostridium ramosum DSM 1402] gi|237733922|ref|ZP_04564403.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167702809|gb|EDS17388.1| hypothetical protein CLORAM_02171 [Clostridium ramosum DSM 1402] gi|229383003|gb|EEO33094.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 507 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V+ C C C+EVCP + F +G+ + I D+CI CG+C+ CP DAI Sbjct: 113 FEVSSGCQACLAHPCIEVCPKNAISFKDGKAY--IDQDKCIKCGLCKTNCPYDAILKRER 170 Query: 61 P 61 P Sbjct: 171 P 171 >gi|170741277|ref|YP_001769932.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195551|gb|ACA17498.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 198 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGA 101 >gi|153002610|ref|YP_001368291.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160877331|ref|YP_001556647.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|217971437|ref|YP_002356188.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|304412793|ref|ZP_07394395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307457|ref|ZP_07587192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|151367228|gb|ABS10228.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160862853|gb|ABX51387.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|217496572|gb|ACK44765.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] gi|304348873|gb|EFM13289.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910245|gb|EFN40678.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|315269536|gb|ADT96389.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 189 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGA 103 >gi|323344712|ref|ZP_08084936.1| ferredoxin [Prevotella oralis ATCC 33269] gi|323093982|gb|EFZ36559.1| ferredoxin [Prevotella oralis ATCC 33269] Length = 55 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV EG + I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACGS--CIDECPVGAISEGNKY-NINPDMCTECGTCADVCPNEAIS 53 >gi|289450529|ref|YP_003475312.1| ferredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185076|gb|ADC91501.1| ferredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 56 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +++ CI C C CP G+ I+P+ CIDCG CE CPV AI + Sbjct: 1 MAYKISDMCISCGT--CEMECPTSSISAGDTQYIINPETCIDCGACEGACPVGAISAE 56 >gi|217971441|ref|YP_002356192.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|217496576|gb|ACK44769.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] Length = 198 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY + + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTVDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|126176326|ref|YP_001052475.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999531|gb|ABN63606.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 187 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGA 103 >gi|291288299|ref|YP_003505115.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885459|gb|ADD69159.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 55 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + ++C C C + CPV EG++ I D C DCG C CPVDAI Sbjct: 1 MAYTINDSCTNCGV--CEDECPVGAISEGDDVRVIDADTCTDCGACAEVCPVDAIDA 55 >gi|119776748|ref|YP_929488.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] gi|119769248|gb|ABM01819.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 580 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 V T+NC LC CV +CP +G E L C+ CG+CE CP I Sbjct: 445 VATDNCTLC--MSCVAICPTAALKDGGDEPKLLFTEQNCVQCGLCEAACPEKVI 496 >gi|331270381|ref|YP_004396873.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum BKT015925] gi|329126931|gb|AEB76876.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum BKT015925] Length = 494 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCP + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPAKAITKINGRAYINQDVCRECGMCKQVCPYNAISEVMRP 161 >gi|188585177|ref|YP_001916722.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349864|gb|ACB84134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 284 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C+ C CV CP D Y+ + I C++CG C CP +AIK D + Sbjct: 90 YFKKNACLHCNEASCVMACPADAIYKDDLGLTQIDNSICVNCGYCVSACPYNAIKYDRKK 149 Query: 62 GL 63 G+ Sbjct: 150 GV 151 >gi|297544478|ref|YP_003676780.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842253|gb|ADH60769.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 506 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + I D+CI+CG C+ CP +AI P Sbjct: 100 YRVTEACRGCLAHKCIEVCPRGAISIRDKRAHIDYDKCIECGRCKDVCPYNAISDTLRP 158 >gi|254559063|ref|YP_003066158.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] gi|254266341|emb|CAX22105.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] Length = 665 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLC--LSCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELW 66 E W Sbjct: 565 EAW 567 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C++VCP + +AI P C CG C CP A P Sbjct: 258 LCAHSRSRITGCTRCLDVCPTGAISPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPA 317 Query: 63 LELWLKINS 71 L ++ S Sbjct: 318 DALMRRLRS 326 >gi|301061526|ref|ZP_07202288.1| anaerobic dimethyl sulfoxide reductase chain B family protein [delta proteobacterium NaphS2] gi|300444334|gb|EFK08337.1| anaerobic dimethyl sulfoxide reductase chain B family protein [delta proteobacterium NaphS2] Length = 149 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 LC+H D C EVCP + Y+ ++ + + PD+CI CG C ECP AI D E G+ Sbjct: 58 LCRHCDDPPCAEVCPEEIIYKRDDGIVVLDPDKCIGCGSCIDECPYGAIVFDHENGV 114 >gi|218528461|ref|YP_002419277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|218520764|gb|ACK81349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] Length = 665 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLC--LSCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELW 66 E W Sbjct: 565 EAW 567 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C++VCP + +AI P C CG C CP A P Sbjct: 258 LCAHSRSRITGCTRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPA 317 Query: 63 LELWLKINS 71 L ++ S Sbjct: 318 DALMRRLRS 326 >gi|119990|sp|P00195|FER_CLOPA RecName: Full=Ferredoxin gi|144806|gb|AAA83524.1| ferredoxin [Clostridium pasteurianum] gi|208373|gb|AAA73179.1| ferredoxin [synthetic construct] Length = 56 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + ++C+ C C CPV+ +G++ I D CIDCG C CPV A Sbjct: 1 MAYKIADSCVSCGA--CASECPVNAISQGDSIFVIDADTCIDCGNCANVCPVGA 52 >gi|225028182|ref|ZP_03717374.1| hypothetical protein EUBHAL_02454 [Eubacterium hallii DSM 3353] gi|224954494|gb|EEG35703.1| hypothetical protein EUBHAL_02454 [Eubacterium hallii DSM 3353] Length = 56 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C CP EG+ I D C+DCG C CP AI Sbjct: 1 MAYVISDDCISCGT--CEGECPAGAISEGDGKYEIDADTCMDCGSCAGACPAGAIS 54 >gi|153956381|ref|YP_001397146.1| ferredoxin [Clostridium kluyveri DSM 555] gi|146349239|gb|EDK35775.1| Ferredoxin [Clostridium kluyveri DSM 555] Length = 57 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV+C +G+ I CIDCG C CPV A+ Sbjct: 1 MAYKITDACMNCGA--CASECPVECISQGDTQFLIDDGTCIDCGSCASVCPVGAL 53 >gi|163849840|ref|YP_001637883.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|188579726|ref|YP_001923171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|218528470|ref|YP_002419286.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240137064|ref|YP_002961533.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens AM1] gi|254559072|ref|YP_003066167.1| formate dehydrogenase iron-sulfur subunit beta [Methylobacterium extorquens DM4] gi|27902653|gb|AAO24617.1| formate dehydrogenase beta subunit [Methylobacterium extorquens] gi|163661445|gb|ABY28812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] gi|179343224|gb|ACB78636.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|218520773|gb|ACK81358.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240007030|gb|ACS38256.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens AM1] gi|254266350|emb|CAX22114.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens DM4] Length = 198 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGCGYCFYACPFGA 101 >gi|170749608|ref|YP_001755868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656130|gb|ACB25185.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 198 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGCGYCFYACPFGA 101 >gi|148378067|ref|YP_001252608.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 3502] gi|153934228|ref|YP_001382466.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 19397] gi|153936953|ref|YP_001386018.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. Hall] gi|153941409|ref|YP_001389424.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. Langeland] gi|168181164|ref|ZP_02615828.1| ferredoxin, 4Fe-4S [Clostridium botulinum NCTC 2916] gi|168185099|ref|ZP_02619763.1| ferredoxin, 4Fe-4S [Clostridium botulinum Bf] gi|170755610|ref|YP_001779687.1| ferredoxin, 4Fe-4S [Clostridium botulinum B1 str. Okra] gi|170758331|ref|YP_001785390.1| ferredoxin, 4Fe-4S [Clostridium botulinum A3 str. Loch Maree] gi|187777348|ref|ZP_02993821.1| hypothetical protein CLOSPO_00900 [Clostridium sporogenes ATCC 15579] gi|226947285|ref|YP_002802376.1| ferredoxin, 4Fe-4S [Clostridium botulinum A2 str. Kyoto] gi|237793373|ref|YP_002860925.1| ferredoxin, 4Fe-4S [Clostridium botulinum Ba4 str. 657] gi|148287551|emb|CAL81615.1| ferredoxin [Clostridium botulinum A str. ATCC 3502] gi|152930272|gb|ABS35772.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 19397] gi|152932867|gb|ABS38366.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. Hall] gi|152937305|gb|ABS42803.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. Langeland] gi|169120822|gb|ACA44658.1| ferredoxin, 4Fe-4S [Clostridium botulinum B1 str. Okra] gi|169405320|gb|ACA53731.1| ferredoxin, 4Fe-4S [Clostridium botulinum A3 str. Loch Maree] gi|182667994|gb|EDT79973.1| ferredoxin, 4Fe-4S [Clostridium botulinum NCTC 2916] gi|182671843|gb|EDT83804.1| ferredoxin, 4Fe-4S [Clostridium botulinum Bf] gi|187774276|gb|EDU38078.1| hypothetical protein CLOSPO_00900 [Clostridium sporogenes ATCC 15579] gi|226844082|gb|ACO86748.1| ferredoxin, 4Fe-4S [Clostridium botulinum A2 str. Kyoto] gi|229261182|gb|ACQ52215.1| ferredoxin, 4Fe-4S [Clostridium botulinum Ba4 str. 657] gi|295317534|gb|ADF97911.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. 230613] gi|322804331|emb|CBZ01881.1| ferredoxin [Clostridium botulinum H04402 065] Length = 56 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ C+ C C CPV+ +G++ I D CIDCG C CPV A Sbjct: 1 MAYKITDACVSCGA--CAAECPVNAISQGDSIFDIDADTCIDCGNCANVCPVGA 52 >gi|169351005|ref|ZP_02867943.1| hypothetical protein CLOSPI_01782 [Clostridium spiroforme DSM 1552] gi|169292067|gb|EDS74200.1| hypothetical protein CLOSPI_01782 [Clostridium spiroforme DSM 1552] Length = 507 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C C+E+CP + F G+ + I D+CI CG+C+ CP DAI Sbjct: 113 YEVSNGCQACLAHPCIEICPKNAISFKNGKAY--IDQDKCIKCGLCKNNCPYDAILKKER 170 Query: 61 P 61 P Sbjct: 171 P 171 >gi|92114039|ref|YP_573967.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91797129|gb|ABE59268.1| formate dehydrogenase beta subunit [Chromohalobacter salexigens DSM 3043] Length = 216 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCFY+ ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCDDAPCMAVCPTDCFYKTDDGIVLHDKDICIGCGYCLYACPFGA 101 >gi|258516935|ref|YP_003193157.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] gi|257780640|gb|ACV64534.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] Length = 677 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + CI C C + CPVD GE I P++CI CG C +CP D I + Sbjct: 570 VLEDQCIACG--ICAKACPVDAI-SGERKKPPYKIDPEKCIRCGACMEKCPKDVIIRGSI 626 Query: 61 PGLE 64 PG + Sbjct: 627 PGFK 630 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + ++L + D+CI CG+C CPVDAI Sbjct: 557 CPAGVCKDLLHYLVLE-DQCIACGICAKACPVDAI 590 >gi|153002602|ref|YP_001368283.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|151367220|gb|ABS10220.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] Length = 553 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C +C CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + AT+ T K+E+ Sbjct: 468 VISLTPQINFDKATRQQQHTLKEEA 492 >gi|170729134|ref|YP_001763160.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814481|gb|ACA89065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 560 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V T+ C LC CV CP +G + A+H +C+ CG+CE CP AI Sbjct: 425 VNTQACTLC--LSCVSTCPTQALTDGGDKPALHFVEQDCVQCGLCESACPEKAI 476 >gi|218961763|ref|YP_001741538.1| putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules) [Candidatus Cloacamonas acidaminovorans] gi|167730420|emb|CAO81332.1| putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules) [Candidatus Cloacamonas acidaminovorans] Length = 398 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ E C+ C C+ C D E I D+C+ CG C CP DAI Sbjct: 3 MIEVLIEKCVGCGA--CLRACAYDAIKIEEKLAIIDSDKCVLCGACVSACPFDAI 55 >gi|288574184|ref|ZP_06392541.1| protein of unknown function DUF362 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569925|gb|EFC91482.1| protein of unknown function DUF362 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 372 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CILC CVE+CP D + L ++CI C C CP +AI+ Sbjct: 310 KRCILCGR--CVEICPADAITMRDRRLVFDYEKCIRCYCCHEMCPANAIR 357 >gi|163849831|ref|YP_001637874.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|163661436|gb|ABY28803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] Length = 679 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 521 TEDCTLC--LSCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 578 Query: 64 ELW 66 E W Sbjct: 579 EAW 581 Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C++VCP + +AI P C CG C CP A P Sbjct: 272 LCAHSRSRITGCTRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPA 331 Query: 63 LELWLKINS 71 L ++ S Sbjct: 332 DALMRRLRS 340 >gi|298372543|ref|ZP_06982533.1| ferredoxin, 4Fe-4S [Bacteroidetes oral taxon 274 str. F0058] gi|298275447|gb|EFI16998.1| ferredoxin, 4Fe-4S [Bacteroidetes oral taxon 274 str. F0058] Length = 55 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+T++C+ C C+ CPV EG+ ++ I P C CG C CP +AI P+ Sbjct: 1 MAYVITDDCVACG--TCIGECPVGAISEGDIYV-IDPTACTSCGTCAEVCPSEAIHPE 55 >gi|325265960|ref|ZP_08132646.1| electron transport complex protein RnfB [Kingella denitrificans ATCC 33394] gi|324982598|gb|EGC18224.1| electron transport complex protein RnfB [Kingella denitrificans ATCC 33394] Length = 284 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ CI C T C+ CPVD + + DEC CG+C P CPVD I Sbjct: 72 VAYIDEAVCIGC--TACIRACPVDAIMGASKLMHTVLADECTGCGLCVPPCPVDCI 125 >gi|212550384|ref|YP_002308701.1| ferredoxin [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548622|dbj|BAG83290.1| ferredoxin [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 55 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+TE+CI C C++ CPV+ EG+ + +I + C +CG C CP +AI Sbjct: 1 MAYVITEDCIACGT--CIDECPVEAISEGDIY-SIDANNCTECGSCASVCPSEAI 52 >gi|254430471|ref|ZP_05044174.1| 4Fe-4S binding domain protein [Cyanobium sp. PCC 7001] gi|197624924|gb|EDY37483.1| 4Fe-4S binding domain protein [Cyanobium sp. PCC 7001] Length = 74 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C + G+ F I D CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVDACPVACIHPGQGANSKGTGFYWIDFDTCIDCGICLQVCPVEGAILPEEKPELQ 71 >gi|331269074|ref|YP_004395566.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925] gi|329125624|gb|AEB75569.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925] Length = 441 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 16/108 (14%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + +T+ CI C T C +VCPV C + + I ++C+ CG C CP+ A+ P Sbjct: 25 FQITDKCIGC--TKCAKVCPVSCISGKIKEKHVIDTEKCVKCGQCISACPMGAL-----P 77 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 ++ L + NI KK L A ++ +YF PG Sbjct: 78 TIDFTLNLK--------NILNKKNKLIIAQVAPSIRATLGEYFGLEPG 117 >gi|29654985|ref|NP_820677.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Coxiella burnetii RSA 493] gi|154707199|ref|YP_001423730.1| electron transport complex protein [Coxiella burnetii Dugway 5J108-111] gi|161830706|ref|YP_001597520.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 331] gi|29542254|gb|AAO91191.1| electron transport complex protein [Coxiella burnetii RSA 493] gi|154356485|gb|ABS77947.1| electron transport complex protein [Coxiella burnetii Dugway 5J108-111] gi|161762573|gb|ABX78215.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 331] Length = 213 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CP D + + D C C +C P CPVD I D Sbjct: 80 IAFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCI--DM 135 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + L + A QW + KK+ S K + ++ E P Sbjct: 136 KIIAPLTPHEKKQKAQQWRSRYEKKQKRLSRHKAEQRRKHQEAKLVNTP 184 >gi|121533839|ref|ZP_01665666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307830|gb|EAX48745.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 55 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +TE C+ C C CPV EG N + +EC++CG C CPV AIK Sbjct: 1 MAYKITEECVACG--SCAATCPVGAIKEG-NPTYVITEECVECGACAAVCPVGAIK 53 >gi|165918320|ref|ZP_02218406.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 334] gi|165917970|gb|EDR36574.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 334] Length = 213 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CP D + + D C C +C P CPVD I D Sbjct: 80 IAFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCI--DM 135 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + L + A QW + KK+ S K + ++ E P Sbjct: 136 KIIAPLTPHEKKQKAQQWRSRYEKKQKRLSRHKAEQRRKHQEAKLVNTP 184 >gi|119988|sp|P00198|FER_CLOAC RecName: Full=Ferredoxin gi|157831050|pdb|1FDN|A Chain A, Refined Crystal Structure Of The 2[4fe-4s] Ferredoxin From Clostridium Acidurici At 1.84 Angstroms Resolution gi|157834957|pdb|2FDN|A Chain A, 2[4fe-4s] Ferredoxin From Clostridium Acidi-Urici Length = 55 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV+ E CI C C CPV+ G++ I D CIDCG C CPVDA Sbjct: 1 AYVINEACISCGA--CEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDA 51 >gi|237752044|ref|ZP_04582524.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter winghamensis ATCC BAA-430] gi|229376611|gb|EEO26702.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter winghamensis ATCC BAA-430] Length = 209 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V+ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 62 AVSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGA 113 >gi|269121613|ref|YP_003309790.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] gi|268615491|gb|ACZ09859.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] Length = 57 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + E CI C C VCPV+ E + AI CIDCG CE CPV+AI + Sbjct: 1 MAYSINKETCIACGA--CEGVCPVEAIAEADGKYAIDGATCIDCGACEGVCPVEAISGE 57 >gi|257063357|ref|YP_003143029.1| dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit [Slackia heliotrinireducens DSM 20476] gi|256791010|gb|ACV21680.1| dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit [Slackia heliotrinireducens DSM 20476] Length = 425 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + E C++ ++ + C C C +N +AI ++CI CG C CP +AI P Sbjct: 21 ITAERCLMVRNRNARCNRCAAACVSGCINTHDNRIAIDAEKCIGCGTCATVCPTEAIAPR 80 Query: 59 TEPGLEL 65 LE+ Sbjct: 81 NPDDLEI 87 >gi|210620595|ref|ZP_03292143.1| hypothetical protein CLOHIR_00086 [Clostridium hiranonis DSM 13275] gi|210155309|gb|EEA86315.1| hypothetical protein CLOHIR_00086 [Clostridium hiranonis DSM 13275] Length = 211 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ CI C C+EVCP +C E + N + I+ C+ CG C CPV+AI Sbjct: 154 YFVTDKCINCGR--CIEVCPQNCIVEDQKNWNQVKINHLNCLSCGNCVEVCPVEAI 207 >gi|157737738|ref|YP_001490421.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|157737750|ref|YP_001490434.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|315637769|ref|ZP_07892966.1| formate dehydrogenase [Arcobacter butzleri JV22] gi|157699592|gb|ABV67752.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|157699604|gb|ABV67764.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|315477939|gb|EFU68675.1| formate dehydrogenase [Arcobacter butzleri JV22] Length = 197 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 + ++ C+ C C +VCP DCFY + + +H D+CI CG C CP A Sbjct: 56 FSLSMACMHCADAPCQQVCPTDCFYIRTDGIVLHDKDKCIGCGYCLFACPFGA 108 >gi|238917328|ref|YP_002930845.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750] gi|238872688|gb|ACR72398.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750] Length = 489 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+VT+NC C C + C + I PD+C +CG+C CP +AI P Sbjct: 97 YIVTDNCRKCMMKACQQACKFGAVSMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRP 155 >gi|224370160|ref|YP_002604324.1| putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD) [Desulfobacterium autotrophicum HRM2] gi|223692877|gb|ACN16160.1| putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD) [Desulfobacterium autotrophicum HRM2] Length = 511 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C++C C CP + AI P C CG+C ECP+DAI+ Sbjct: 322 CVIC--LTCYRCCPHGAIFWENGVAAISPVACQGCGICASECPMDAIQ 367 >gi|215445027|ref|ZP_03431779.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] Length = 159 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSEY 73 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Y Sbjct: 2 NCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASY 61 Query: 74 ATQWP 78 + P Sbjct: 62 YPKRP 66 >gi|77919429|ref|YP_357244.1| ferredoxin 2 [Pelobacter carbinolicus DSM 2380] gi|77545512|gb|ABA89074.1| ferredoxin 2 [Pelobacter carbinolicus DSM 2380] Length = 583 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 Y C C + CV CPV + I P++C+ CG C CP +A ++ D + Sbjct: 12 YTRETECQDC--SKCVRYCPVKAIKVADGQARIVPEKCVACGTCVRVCPANAKRVRDDLD 69 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 P + L + Y + P+ ++ +PS + +++ Sbjct: 70 PTKRMLLSSDRVYVSLAPSYVSEFPDIPSTQIIAALRK 107 >gi|150391799|ref|YP_001321848.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149951661|gb|ABR50189.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 596 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+T++C C T CV+ CPVD + E + I+ D CI CG C +CP AI Sbjct: 542 YVITDDCKGC--TLCVKACPVDAIHGERKAVHLINTDTCIKCGACVDKCPFKAI 593 >gi|293607054|ref|ZP_06689397.1| benzoyl-CoA oxygenase [Achromobacter piechaudii ATCC 43553] gi|292814544|gb|EFF73682.1| benzoyl-CoA oxygenase [Achromobacter piechaudii ATCC 43553] Length = 416 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 17/91 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C E CPVD N + PD C C C P CP +I + W Sbjct: 18 EICIRC--NTCEETCPVDAITHDSNNYVVDPDICNGCMACVPPCPTGSI--------DNW 67 Query: 67 -LKINSE-YATQ----WPNITTKKESLPSAA 91 L + SE Y+ Q W + K++SLP+ A Sbjct: 68 RLMVRSEAYSVQEQLGWEEL-PKEKSLPTPA 97 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 16/25 (64%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I P+ CI C CE CPVDAI D+ Sbjct: 15 IDPEICIRCNTCEETCPVDAITHDS 39 >gi|119776744|ref|YP_929484.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119769244|gb|ABM01815.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] Length = 198 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP +CFY+ ++ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPANCFYKTDDGIVLHNKDTCIGCGYCFYACPFGA 103 >gi|325264637|ref|ZP_08131367.1| conserved domain protein [Clostridium sp. D5] gi|324030299|gb|EGB91584.1| conserved domain protein [Clostridium sp. D5] Length = 56 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + + C+ C C CPV EG+ I D C+DCG CE CP AI+ + Sbjct: 1 MAHFINDECVSCGS--CEGECPVGAIAEGDGKYVIDADACVDCGACEGACPTGAIQAE 56 >gi|256810171|ref|YP_003127540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793371|gb|ACV24040.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 151 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C++ C E+CPVD Y E + + CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKEGIPIVEKERCIACGMCAIACPIGAI 88 >gi|330997493|ref|ZP_08321342.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] gi|329570524|gb|EGG52248.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] Length = 54 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++C+ C C++ CPV EGE ++ I+ D C +CG C CP AI Sbjct: 1 MAYVIGDDCVACGT--CIDECPVGAISEGEKYV-INADACTECGTCADVCPSGAIS 53 >gi|259416523|ref|ZP_05740443.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] gi|259347962|gb|EEW59739.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] Length = 667 Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Query: 10 ILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +LC H T C++ CP + +AI P C CG C CP AI D P Sbjct: 284 LLCAHSRARQTGCTRCLDACPTGAITPNGDSVAIDPMICAGCGACASLCPSSAITYDAPP 343 Query: 62 GLELWLKINS 71 L+L++ + Sbjct: 344 AESLFLRVQT 353 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C LC CV +CP + + L D C+ CG+C CP DAI EP L L Sbjct: 519 CTLC--LSCVSLCPPGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAIT--YEPRLNL 573 >gi|224418325|ref|ZP_03656331.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter canadensis MIT 98-5491] gi|253827646|ref|ZP_04870531.1| formate dehydrogenase subunit B [Helicobacter canadensis MIT 98-5491] gi|313141855|ref|ZP_07804048.1| formate dehydrogenase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] gi|253511052|gb|EES89711.1| formate dehydrogenase subunit B [Helicobacter canadensis MIT 98-5491] gi|313130886|gb|EFR48503.1| formate dehydrogenase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] Length = 209 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V+ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 62 AVSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGA 113 >gi|300855183|ref|YP_003780167.1| Fe-S-cluster-containing hydrogenase component [Clostridium ljungdahlii DSM 13528] gi|300435298|gb|ADK15065.1| Fe-S-cluster-containing hydrogenase component [Clostridium ljungdahlii DSM 13528] Length = 190 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C + C VCPV EN + + + CI C +C CP A+ D P + Sbjct: 59 CRQCDDSPCANVCPVGAIVHQENKVVVKTELCIGCKICMLACPFGAM--DMAPQYK---- 112 Query: 69 INSEYATQWPNITTKKES 86 NS TQ N+ TK+ES Sbjct: 113 -NSHKQTQILNVITKEES 129 >gi|210613377|ref|ZP_03289697.1| hypothetical protein CLONEX_01904 [Clostridium nexile DSM 1787] gi|210151219|gb|EEA82227.1| hypothetical protein CLONEX_01904 [Clostridium nexile DSM 1787] Length = 56 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCGA--CEAECPVGAISQGADHYEIDKDACVDCGACAAQCPTGAISAE 56 >gi|281422556|ref|ZP_06253555.1| conserved domain protein [Prevotella copri DSM 18205] gi|281403380|gb|EFB34060.1| conserved domain protein [Prevotella copri DSM 18205] Length = 55 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++CI C C++ CP EGE + +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACGT--CIDECPSGAISEGEKY-SINPDLCTECGTCADVCPNEAIS 53 >gi|219851494|ref|YP_002465926.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219545753|gb|ACL16203.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 203 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 12 CKHTD---CVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+H D C++VCP + Y +AIH + CIDC VC CP I+ ++L Sbjct: 59 CRHCDPAPCMQVCPTEALYRDLSTGSVAIHYNRCIDCAVCAMACPFGVIRFQRVRQVDLP 118 Query: 67 LKINSE 72 +N++ Sbjct: 119 RDVNAK 124 >gi|212211971|ref|YP_002302907.1| electron transport complex protein [Coxiella burnetii CbuG_Q212] gi|212010381|gb|ACJ17762.1| electron transport complex protein [Coxiella burnetii CbuG_Q212] Length = 206 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CP D + + D C C +C P CPVD I D Sbjct: 80 IAFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCI--DM 135 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + L + A QW + KK+ S K + ++ E P Sbjct: 136 KIIAPLTPHEKKQKAQQWRSRYEKKQKRLSRHKAEQRRKHQEAKLVNTP 184 >gi|309390025|gb|ADO77905.1| Ferredoxin hydrogenase [Halanaerobium praevalens DSM 2228] Length = 501 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + VT NC C C VCPVD E I ++CI+CG C+ CP +AI Sbjct: 115 AHFVTNNCRKCLAHPCSIVCPVDAITIEEKAAVIDQEKCINCGKCKKACPYEAI 168 >gi|242309248|ref|ZP_04808403.1| fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter pullorum MIT 98-5489] gi|239524289|gb|EEQ64155.1| fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter pullorum MIT 98-5489] Length = 209 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V+ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 62 AVSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGA 113 >gi|296533719|ref|ZP_06896269.1| formate dehydrogenase [Roseomonas cervicalis ATCC 49957] gi|296265941|gb|EFH12016.1| formate dehydrogenase [Roseomonas cervicalis ATCC 49957] Length = 198 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCPV CFY + + +H D CI CG C CP A Sbjct: 51 ISMACMHCTDAPCAAVCPVSCFYTTADAIVLHDKDLCIGCGYCFYACPFGA 101 >gi|317478673|ref|ZP_07937828.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316905184|gb|EFV26983.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 56 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG+ + I P+ C +CG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEGDIY-HIDPETCTECGTCADVCPSEAIHP 54 >gi|315651987|ref|ZP_07904989.1| ferredoxin [Eubacterium saburreum DSM 3986] gi|315485816|gb|EFU76196.1| ferredoxin [Eubacterium saburreum DSM 3986] Length = 55 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV +G+ I D CIDCG C CP +AI Sbjct: 1 MAYTITDKCVSCGT--CEGECPVSAISQGDTQYNIDADACIDCGTCASVCPTEAI 53 >gi|153207582|ref|ZP_01946265.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212217980|ref|YP_002304767.1| electron transport complex protein [Coxiella burnetii CbuK_Q154] gi|120576550|gb|EAX33174.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212012242|gb|ACJ19622.1| electron transport complex protein [Coxiella burnetii CbuK_Q154] Length = 213 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CP D + + D C C +C P CPVD I D Sbjct: 80 IAFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCI--DM 135 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + L + A QW + KK+ S K + ++ E P Sbjct: 136 KIIAPLTPHEKKQKAQQWRSRYEKKQKRLSLHKAEQRRKHQEAKLVNTP 184 >gi|226323506|ref|ZP_03799024.1| hypothetical protein COPCOM_01281 [Coprococcus comes ATCC 27758] gi|225208190|gb|EEG90544.1| hypothetical protein COPCOM_01281 [Coprococcus comes ATCC 27758] Length = 56 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV G + + I C+DCG CE CP AI + Sbjct: 1 MAHVISDECVSCGA--CESECPVGAISMGADHMQIDASACVDCGACESACPTGAISAE 56 >gi|308271987|emb|CBX28595.1| hypothetical protein N47_G39190 [uncultured Desulfobacterium sp.] Length = 1029 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V ++ C C CV VCP F + + I P +C CGVC ECP AI+ Sbjct: 956 VDSKKCAAC--LICVRVCPFGVPFINADGYSEIDPSKCHGCGVCASECPAKAIQ 1007 >gi|212696414|ref|ZP_03304542.1| hypothetical protein ANHYDRO_00952 [Anaerococcus hydrogenalis DSM 7454] gi|256545289|ref|ZP_05472653.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170] gi|325849213|ref|ZP_08170664.1| ferredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212676586|gb|EEB36193.1| hypothetical protein ANHYDRO_00952 [Anaerococcus hydrogenalis DSM 7454] gi|256398970|gb|EEU12583.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170] gi|325480213|gb|EGC83280.1| ferredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 58 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI P Sbjct: 1 MAYRIDENTCISCGS--CEGECPVQAIEQGDAAYEIDEDACIDCGSCAAVCPVEAISP 56 >gi|119992|sp|P00197|FER_CLOSM RecName: Full=Ferredoxin gi|65699|pir||FECLCE ferredoxin 2[4Fe-4S] - Clostridium sp Length = 55 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C C CPV+ E + I D+CIDCG C CPVDAI Sbjct: 1 AYKITDGCINCGA--CEPECPVEAISESDAVRVIDADKCIDCGACANTCPVDAI 52 >gi|288925659|ref|ZP_06419591.1| conserved hypothetical protein [Prevotella buccae D17] gi|315606445|ref|ZP_07881460.1| ferredoxin [Prevotella buccae ATCC 33574] gi|288337597|gb|EFC75951.1| conserved hypothetical protein [Prevotella buccae D17] gi|315251851|gb|EFU31825.1| ferredoxin [Prevotella buccae ATCC 33574] Length = 55 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CPV EG+ + +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPVGAISEGDIY-SINPDACTECGTCADVCPNEAIS 53 >gi|238018929|ref|ZP_04599355.1| hypothetical protein VEIDISOL_00789 [Veillonella dispar ATCC 17748] gi|313892975|ref|ZP_07826552.1| ferredoxin [Veillonella sp. oral taxon 158 str. F0412] gi|237864413|gb|EEP65703.1| hypothetical protein VEIDISOL_00789 [Veillonella dispar ATCC 17748] gi|313442328|gb|EFR60743.1| ferredoxin [Veillonella sp. oral taxon 158 str. F0412] Length = 54 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV EGE I+ D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCGS--CASVCPVSAISEGETKYEIN-DTCIDCGSCESVCPVSVISAE 54 >gi|254166869|ref|ZP_04873723.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|289596256|ref|YP_003482952.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] gi|197624479|gb|EDY37040.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|289534043|gb|ADD08390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] Length = 62 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 24/42 (57%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CV CPV+C + E + I D+CI CG C CPV AI D Sbjct: 17 CVGSCPVNCMFLDETIVRIDEDKCIKCGFCIRACPVGAISAD 58 >gi|254167532|ref|ZP_04874384.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|197623795|gb|EDY36358.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] Length = 62 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 24/42 (57%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CV CPV+C + E + I D+CI CG C CPV AI D Sbjct: 17 CVGSCPVNCMFLDETIVRIDEDKCIKCGFCIRACPVGAISAD 58 >gi|224371439|ref|YP_002605603.1| putative ferredoxin [Desulfobacterium autotrophicum HRM2] gi|223694156|gb|ACN17439.1| putative ferredoxin [Desulfobacterium autotrophicum HRM2] Length = 122 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 22/115 (19%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++ E C C+ C++ C V+ E+ I DECI CGVC CP +A++ D E Sbjct: 1 MPWINKELCTGCQ--TCIDECSVEAISMEEDIAFIDEDECIRCGVCHDVCPENAVRHDGE 58 Query: 61 PGLE------LWLK--INSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 E +W K + EY + N TK++ L ++ +++F+ N Sbjct: 59 RIPEEVQSNLIWAKKLLTHEY---YSNDKTKQKQLI---------ERLQRFFTKN 101 >gi|291535976|emb|CBL09088.1| Iron only hydrogenase large subunit, C-terminal domain [Roseburia intestinalis M50/1] Length = 482 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|317133102|ref|YP_004092416.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ethanoligenens harbinense YUAN-3] gi|315471081|gb|ADU27685.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ethanoligenens harbinense YUAN-3] Length = 56 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y + CI C C CPV C EG+ I C+DCG C CPV A K Sbjct: 1 MAYKIGSECISCGA--CASECPVSCISEGDGIYVIDEATCVDCGTCATVCPVAAPK 54 >gi|289191613|ref|YP_003457554.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938063|gb|ADC68818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 151 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C++ C E+CPVD Y E + + CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKEGIPIVDKERCIACGMCAIACPIGAI 88 >gi|167768244|ref|ZP_02440297.1| hypothetical protein CLOSS21_02800 [Clostridium sp. SS2/1] gi|317497791|ref|ZP_07956103.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167709768|gb|EDS20347.1| hypothetical protein CLOSS21_02800 [Clostridium sp. SS2/1] gi|291560258|emb|CBL39058.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [butyrate-producing bacterium SSC/2] gi|316894904|gb|EFV17074.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 56 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+++ CI C C CP EG+ I D C++CG C CP AI Sbjct: 1 MAYVISDACISCGA--CEGTCPAGAISEGDGQYVIDADTCMECGACADGCPAGAIS 54 >gi|145218852|ref|YP_001129561.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205016|gb|ABP36059.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeovibrioides DSM 265] Length = 522 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C C+ CV++CPV+ ++ ++ + CI C C CP +A+ D E Sbjct: 51 YFTVLRCNHCEEPPCVDICPVEALHKRDDGIVDFDSRRCIGCKACAQACPYNAVYIDPES 110 Query: 62 G 62 G Sbjct: 111 G 111 >gi|39996541|ref|NP_952492.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|39983422|gb|AAR34815.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|298505557|gb|ADI84280.1| ferredoxin family protein [Geobacter sulfurreducens KN400] Length = 94 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + E C+ C CVEVCP F EG + D+C++CG C CP AI+ D G Sbjct: 16 IGEKCVGCGM--CVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNCPASAIRVDAGVG 72 >gi|240171952|ref|ZP_04750611.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium kansasii ATCC 12478] Length = 527 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSA 90 L I P C+DCG C CPV AI PD+ E +++IN+ Y + P LP Sbjct: 2 LYIDPVACVDCGACVSACPVGAIAPDSRLESRQLPFVEINASYYPKRP----ADAKLPPT 57 Query: 91 AKM 93 +K+ Sbjct: 58 SKL 60 >gi|77460730|ref|YP_350237.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens Pf0-1] gi|77384733|gb|ABA76246.1| putative electron transpor-related protein [Pseudomonas fluorescens Pf0-1] Length = 404 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ CI C T C++ CP+D + + DEC C +C CPVD I+ Sbjct: 73 VAYIREAECIGC--TKCIQACPIDAIVGAAKLMHTVIIDECTGCDLCVAPCPVDCIEMHP 130 Query: 60 EP--------GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 P GL + L +E AAK D +Q++E+ Sbjct: 131 LPLGTLPVVGGLAISL----------------EEQQARAAKRDHARQRFER 165 >gi|291538469|emb|CBL11580.1| Iron only hydrogenase large subunit, C-terminal domain [Roseburia intestinalis XB6B4] Length = 482 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|254424789|ref|ZP_05038507.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] gi|196192278|gb|EDX87242.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] Length = 74 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +EG ++ I D CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVDACPVACIHEGPGKNKKGTDWYWIDFDTCIDCGICLQVCPVEGAILPEEKPELQ 71 >gi|257792589|ref|YP_003183195.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476486|gb|ACV56806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 213 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP C + + + +HPD+CI C C CP A++ TE Sbjct: 57 GCHHCAEAPCVDACPTGCLFTDDEHVGVHPDKCIGCRNCVLACPYGAVEIVTE 109 >gi|212637708|ref|YP_002314233.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212559192|gb|ACJ31646.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 559 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V TE+C LC CV CP +G + A+H +C+ CG+C+ CP I Sbjct: 424 VNTESCTLC--MSCVATCPTGALTDGGDLPALHFVEQDCVQCGLCDAGCPEKVI 475 >gi|253582598|ref|ZP_04859819.1| electron transport complex protein [Fusobacterium varium ATCC 27725] gi|251835468|gb|EES64008.1| electron transport complex protein [Fusobacterium varium ATCC 27725] Length = 333 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 26/44 (59%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C + CPVD N I P++CI CG+C +CP +AIK + + Sbjct: 224 CKKACPVDAITVENNLAKIDPEKCIQCGLCAAKCPTNAIKSEIK 267 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 14 HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 H DC VCPV+ + +A ++ D+CI CG+C+ CP I Sbjct: 146 HGDCERVCPVNAIKVNDKGIAEVNEDKCISCGLCQKACPKKVI 188 >gi|257470438|ref|ZP_05634529.1| electron transport complex, RnfABCDGE type, B subunit [Fusobacterium ulcerans ATCC 49185] gi|317064646|ref|ZP_07929131.1| electron transport complex protein [Fusobacterium ulcerans ATCC 49185] gi|313690322|gb|EFS27157.1| electron transport complex protein [Fusobacterium ulcerans ATCC 49185] Length = 333 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 26/44 (59%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C + CPVD N I P++CI CG+C +CP +AIK + + Sbjct: 224 CKKACPVDAITVENNLAKIDPEKCIQCGLCAAKCPTNAIKSEIK 267 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 14 HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 H DC VCPV+ + +A + D+CI CG+C+ CP I Sbjct: 146 HGDCERVCPVNAIKVNDKGIAEVDEDKCISCGLCQKACPKKVI 188 >gi|167752846|ref|ZP_02424973.1| hypothetical protein ALIPUT_01107 [Alistipes putredinis DSM 17216] gi|167659915|gb|EDS04045.1| hypothetical protein ALIPUT_01107 [Alistipes putredinis DSM 17216] Length = 56 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ + C+ C C++ CPV+ G+ ++ I PD+CIDCG C CP +AIKP+ Sbjct: 1 MAYKISPDLCVACGT--CIDECPVEAISAGDVYV-IDPDKCIDCGTCAGVCPSEAIKPE 56 >gi|148657272|ref|YP_001277477.1| cyclic nucleotide-binding protein [Roseiflexus sp. RS-1] gi|148569382|gb|ABQ91527.1| cyclic nucleotide-binding protein [Roseiflexus sp. RS-1] Length = 482 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK------P 57 + + C C+ +CVE CP D E+ D C CG C P CP A+ P Sbjct: 357 IADACRQCRVGAECVEACPEDAIVWNESGALFITDACNGCGACVPACPYHAVDMRSIAPP 416 Query: 58 DTEPGLELWLKI 69 P LW ++ Sbjct: 417 HQSPLWGLWQRL 428 >gi|163749862|ref|ZP_02157107.1| iron-sulfur cluster-binding protein [Shewanella benthica KT99] gi|161330376|gb|EDQ01355.1| iron-sulfur cluster-binding protein [Shewanella benthica KT99] Length = 561 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V T++C LC CV CP +G + A++ +C+ CG+CE CP +AI ++ Sbjct: 426 VNTDSCTLC--LSCVSTCPTQALTDGGDKPALNFLEQDCVQCGLCEKACPENAISLTSQM 483 Query: 62 GLE 64 L+ Sbjct: 484 NLD 486 >gi|89074879|ref|ZP_01161329.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium sp. SKA34] gi|90578566|ref|ZP_01234376.1| putative formate dehydrogenase, iron-sulfur subunit [Vibrio angustum S14] gi|89049276|gb|EAR54839.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium sp. SKA34] gi|90439399|gb|EAS64580.1| putative formate dehydrogenase, iron-sulfur subunit [Vibrio angustum S14] Length = 205 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK-PDTEPG 62 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + P E Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSQTEDGIVQHDKDLCIGCGYCLFACPFGAPQFPKQEAF 112 Query: 63 LELWLKINSEYATQWPN 79 E Y + PN Sbjct: 113 AERGKMDKCTYCSGGPN 129 >gi|295094467|emb|CBK83558.1| Iron only hydrogenase large subunit, C-terminal domain [Coprococcus sp. ART55/1] Length = 484 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C + C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGRACQQACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLMRP 152 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAI 55 C++ CPV EN I D+CIDCG C +CP AI Sbjct: 153 CIKSCPVGAISVAENGTGIAVIDKDKCIDCGSCIHKCPFGAI 194 >gi|296137382|ref|YP_003644624.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|294341676|emb|CAZ90095.1| formate dehydrogenase iron-sulfur subunit [Thiomonas sp. 3As] gi|295797504|gb|ADG32294.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 210 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPV CFY + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCMAVCPVSCFYRTPEGVVLHDKDVCIGCGYCSYACPFGA 101 >gi|219856694|ref|YP_002473816.1| hypothetical protein CKR_3351 [Clostridium kluyveri NBRC 12016] gi|219570418|dbj|BAH08402.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 57 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ C+ C C CPV+C +G+ I CIDCG C CPV A Sbjct: 1 MAYKITDACMNCGA--CASECPVECISQGDTQFLIDDGTCIDCGSCASVCPVGA 52 >gi|257065142|ref|YP_003144814.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792795|gb|ACV23465.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 207 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C + C++VCP ++ +N + ++ + CI CG C CP +A K D E Sbjct: 61 VYYVSTSCQHCGNPACIKVCPTGAMHKEDNGAVLVNTERCIGCGYCHLSCPYNAPKVDRE 120 Query: 61 PG 62 G Sbjct: 121 AG 122 >gi|153005941|ref|YP_001380266.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029514|gb|ABS27282.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 263 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 ++ V + C CK T CV+VCPV Y ++ L + D CI CG C CP + + P+ Sbjct: 129 SFFVPKMCNHCKETPCVQVCPVGASYRTQDGLVLVDGDRCIGCGYCVQACPYGSRFLSPE 188 Query: 59 TE 60 T Sbjct: 189 TH 190 >gi|298245739|ref|ZP_06969545.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Ktedonobacter racemifer DSM 44963] gi|297553220|gb|EFH87085.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Ktedonobacter racemifer DSM 44963] Length = 601 Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 22/67 (32%) Query: 9 CILCKHTDCVEVCPVDCF--------------------YEGENFLAIHPDECIDCGVCEP 48 CILC + CV++CP DC +EG + I ++CI CG+C Sbjct: 513 CILC--SGCVDICPYDCISMEGLSRVVKGDPMHQGTSTWEGGADMIIDEEKCIRCGLCVV 570 Query: 49 ECPVDAI 55 CP DAI Sbjct: 571 RCPTDAI 577 >gi|254458516|ref|ZP_05071941.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207084824|gb|EDZ62111.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 202 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 + Y ++ C+ C C +VCP DCFY E+ + +H E CI C C CP A Sbjct: 51 LEYSLSIACMHCTDAPCEQVCPTDCFYIREDGIVLHDKEKCIGCAYCLYACPFGA 105 >gi|89895375|ref|YP_518862.1| iron-sulfur protein [Desulfitobacterium hafniense Y51] gi|89334823|dbj|BAE84418.1| iron-sulfur protein [Desulfitobacterium hafniense Y51] Length = 162 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T V C C+ CV+VCP Y+ E + ++ + CI C +C CP +I TE Sbjct: 56 TTVALTQCRQCEDAPCVKVCPNGSLYQEEGLVKLNRETCIGCKLCARACPFGSITMTTE 114 >gi|260437208|ref|ZP_05791024.1| hydrogenase subunit [Butyrivibrio crossotus DSM 2876] gi|292810521|gb|EFF69726.1| hydrogenase subunit [Butyrivibrio crossotus DSM 2876] Length = 481 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C+ C GE+ I +C +CG+C CP +AI P Sbjct: 92 SYTVTDNCQNCPGKACINACKFGAISTGEHHSKIDGSKCKECGMCAKACPYNAIAHLKRP 151 >gi|188579717|ref|YP_001923162.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|179343215|gb|ACB78627.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] Length = 665 Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I Sbjct: 507 TEDCTLC--LSCVGACPTHALTDSADRPLLAFEESLCVQCGLCAATCPEDVIDLTPRIDF 564 Query: 64 ELW 66 E W Sbjct: 565 EAW 567 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 8/69 (11%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C++VCP + +AI P C CG C CP A P Sbjct: 258 LCAHSRSRITGCTRCLDVCPTGAIASAGDSVAIDPYICAGCGSCAAVCPTGAANYALPPA 317 Query: 63 LELWLKINS 71 L ++ S Sbjct: 318 DALMRRLRS 326 >gi|189485409|ref|YP_001956350.1| 4Fe-4S binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287368|dbj|BAG13889.1| 4Fe-4S binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 57 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN C+ C C CPV + E+ I+ D+C CGVCE CPV AI Sbjct: 1 MAYQINENACVGCGA--CAGSCPVSAIEQKEDKYTINSDKCKGCGVCESTCPVSAI 54 >gi|121535200|ref|ZP_01667015.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306191|gb|EAX47118.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 356 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+T+NC C+ C++ CP + E + I ++CI CG C C DA+K D Sbjct: 191 VLTDNCRFCQK--CLKWCPQEAIIEKDGKAYIMTEKCIGCGECLAVCRFDAVKYD 243 >gi|115523011|ref|YP_779922.1| thiamine pyrophosphate binding domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516958|gb|ABJ04942.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Rhodopseudomonas palustris BisA53] Length = 605 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +VTE C C+ C+ + CP D ++EG + + I P CI C +C C +D IKP Sbjct: 543 IVTEQCTACQ--SCMNLGCPALTWSDQWFEGRHRVQIDPALCIGCTLCAQVCTIDCIKP 599 >gi|317056017|ref|YP_004104484.1| ferredoxin [Ruminococcus albus 7] gi|315448286|gb|ADU21850.1| ferredoxin [Ruminococcus albus 7] Length = 56 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y ++++CI C C CPV EG+ I C+DCG C CPV A Sbjct: 1 MAYKISDDCIGCGA--CAAECPVGAISEGDGKYVIDASACLDCGACAGTCPVGA 52 >gi|156742845|ref|YP_001432974.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] gi|156234173|gb|ABU58956.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] Length = 482 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V C C+ +CVE CP D ++ + D C CG C P CP DA+ Sbjct: 357 VANACRQCRVGAECVEACPEDAIVWNDSGALMITDACTGCGECVPACPYDAV 408 >gi|294632939|ref|ZP_06711498.1| ferredoxin-NADP reductase [Streptomyces sp. e14] gi|292830720|gb|EFF89070.1| ferredoxin-NADP reductase [Streptomyces sp. e14] Length = 514 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 16/25 (64%), Positives = 16/25 (64%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKP 57 L I P CIDCG C CPVDAI P Sbjct: 2 LYIDPKSCIDCGACADACPVDAISP 26 >gi|290967991|ref|ZP_06559540.1| ferredoxin [Megasphaera genomosp. type_1 str. 28L] gi|290781897|gb|EFD94476.1| ferredoxin [Megasphaera genomosp. type_1 str. 28L] Length = 54 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+++ C++C C CP EGE+ I D CIDCG CE CP AI + Sbjct: 2 HVISDECVMCG--SCAATCPTGAIEEGESKYVI-TDSCIDCGACESVCPTGAISAE 54 >gi|78184657|ref|YP_377092.1| ferredoxin [Synechococcus sp. CC9902] gi|78168951|gb|ABB26048.1| ferredoxin [Synechococcus sp. CC9902] Length = 74 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G +F I+ D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVDACPVACIDQGSGKNSKGTDFYVINFDTCIDCGICLQVCPVEGAILAEERPDLQ 71 >gi|300245949|gb|ADJ94032.1| putative benzoate-degrading protein BamI [Clostridia bacterium enrichment culture clone BF] Length = 365 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CVEVCPV+ +F + CI CGVC P+CP +A K L L +N Sbjct: 297 CVEVCPVNALTMEGDFPVVDEGWCIGCGVCIPKCPTEAAK------LRLRTDVNQSPTAT 350 Query: 77 WPNITTK 83 + + TK Sbjct: 351 FKELYTK 357 >gi|24375983|ref|NP_720026.1| iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] gi|24350982|gb|AAN57470.1|AE015883_1 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 558 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 423 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCESACP--------EK 472 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 473 VISLTPQINFDKAARQQQHTLKEEA 497 >gi|163814709|ref|ZP_02206098.1| hypothetical protein COPEUT_00860 [Coprococcus eutactus ATCC 27759] gi|158450344|gb|EDP27339.1| hypothetical protein COPEUT_00860 [Coprococcus eutactus ATCC 27759] Length = 484 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C + C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGRACQQACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLMRP 152 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAI 55 C++ CPV EN I D+CIDCG C +CP AI Sbjct: 153 CIKSCPVGAISVAENGTGIAVIDKDKCIDCGSCIHKCPFGAI 194 >gi|77918639|ref|YP_356454.1| NifJ-like oxidoreductase, Fe-S subunit [Pelobacter carbinolicus DSM 2380] gi|77544722|gb|ABA88284.1| NifJ-like oxidoreductase, Fe-S subunit [Pelobacter carbinolicus DSM 2380] Length = 1180 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 27 YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI--NSEYATQWPNITTK 83 +EG F L + P++C+ CG+C CPV + + L + K+ + A W Sbjct: 733 FEGNKFTLQVAPEDCVGCGICVEVCPVKDRQDASRKALNMQFKVPLREQEAVNWDFFMAL 792 Query: 84 KESLPSAAKMDGVK 97 E+ P+ K D +K Sbjct: 793 PETDPAKVKRDTLK 806 >gi|99080237|ref|YP_612391.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036517|gb|ABF63129.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 652 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Query: 10 ILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +LC H T C++ CP + +AI P C CG C CP AI D P Sbjct: 269 LLCAHSRARQTGCTRCLDACPTGAITPNGDSVAIDPMICAGCGACASLCPSGAITYDAPP 328 Query: 62 GLELWLKINS 71 L+L+I + Sbjct: 329 TESLFLRIQT 338 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + E+ L D C+ CG+C CP DAI Sbjct: 499 VDTDACTLC--LSCVSLCPSGALGDNEDLPQLRFQEDACLQCGLCANACPEDAI 550 >gi|317405896|gb|EFV86178.1| ferredoxin-NADP oxidoreductase [Achromobacter xylosoxidans C54] Length = 415 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D N + PD C C C P CP +I Sbjct: 18 EICIRC--NTCEETCPIDAITHDSNNYVVDPDICNSCMACVPPCPTGSI 64 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I P+ CI C CE CP+DAI D+ Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDS 39 >gi|302670217|ref|YP_003830177.1| iron-only hydrogenase [Butyrivibrio proteoclasticus B316] gi|302394690|gb|ADL33595.1| iron-only hydrogenase [Butyrivibrio proteoclasticus B316] Length = 490 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 25/54 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+NC C C+ C G+ + I P +C +CG C CP AI Sbjct: 95 AYSVTDNCRFCMGKACLNSCAFGAISPGDTHMHIDPAKCKECGKCAAACPYSAI 148 >gi|291548248|emb|CBL21356.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus sp. SR1/5] Length = 56 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C CP + +G+ I D C+DCG C CPV AI + Sbjct: 1 MAYVISDECVSCGT--CEGECPNEAISQGDEHYVIDADACVDCGTCAEACPVGAISAE 56 >gi|317488877|ref|ZP_07947407.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832690|ref|ZP_08165453.1| putative electron transport protein HydN [Eggerthella sp. HGA1] gi|316911951|gb|EFV33530.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485829|gb|EGC88290.1| putative electron transport protein HydN [Eggerthella sp. HGA1] Length = 207 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP C + + + +HPD+CI C C CP A++ TE Sbjct: 51 GCHHCAEAPCVDACPTGCLFTDDEHVGVHPDKCIGCRNCVLACPYGAVEIVTE 103 >gi|291530322|emb|CBK95907.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium siraeum 70/3] gi|291557135|emb|CBL34252.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium siraeum V10Sc8a] Length = 56 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y ++++CI C C CPV+ EG+ I D C+ CG C CPV A Sbjct: 1 MAYKISDDCISCGA--CAAQCPVEAISEGDGKYVIDADTCVSCGACAGVCPVGA 52 >gi|197118659|ref|YP_002139086.1| ferredoxin-like protein [Geobacter bemidjiensis Bem] gi|253700567|ref|YP_003021756.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|197088019|gb|ACH39290.1| ferredoxin-related protein [Geobacter bemidjiensis Bem] gi|251775417|gb|ACT17998.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 55 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + +++ CI C D + CPV+ E + I D CIDCG C CPV AI Sbjct: 1 MAHTISDECINCGACD--DSCPVNAISEAGDKRTIAADTCIDCGACVDTCPVSAISA 55 >gi|116070524|ref|ZP_01467793.1| ferredoxin [Synechococcus sp. BL107] gi|116065929|gb|EAU71686.1| ferredoxin [Synechococcus sp. BL107] Length = 74 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G +F I+ D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVDACPVACIDQGNGKNTKGTDFYVINFDTCIDCGICLQVCPVEGAILAEERPDLQ 71 >gi|332879175|ref|ZP_08446873.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682833|gb|EGJ55732.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 267 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ T +CI C C++VCP+ F + + L ++ + CI C +C CP D+I Sbjct: 184 VVFLNTTSCIKC--GKCMKVCPMSIFQKSDVLLPMNEENCIQCQLCTKHCPTDSI 236 >gi|18311429|ref|NP_563363.1| ferredoxin [Clostridium perfringens str. 13] gi|110800097|ref|YP_697135.1| putative ferredoxin [Clostridium perfringens ATCC 13124] gi|168206841|ref|ZP_02632846.1| putative ferredoxin [Clostridium perfringens E str. JGS1987] gi|168211231|ref|ZP_02636856.1| putative ferredoxin [Clostridium perfringens B str. ATCC 3626] gi|168214736|ref|ZP_02640361.1| putative ferredoxin [Clostridium perfringens CPE str. F4969] gi|168217940|ref|ZP_02643565.1| putative ferredoxin [Clostridium perfringens NCTC 8239] gi|169344118|ref|ZP_02865101.1| putative ferredoxin [Clostridium perfringens C str. JGS1495] gi|182626000|ref|ZP_02953763.1| putative ferredoxin [Clostridium perfringens D str. JGS1721] gi|20141076|sp|P22846|FER_CLOPE RecName: Full=Ferredoxin gi|18146113|dbj|BAB82153.1| ferredoxin [Clostridium perfringens str. 13] gi|110674744|gb|ABG83731.1| putative ferredoxin [Clostridium perfringens ATCC 13124] gi|169297729|gb|EDS79828.1| putative ferredoxin [Clostridium perfringens C str. JGS1495] gi|170661735|gb|EDT14418.1| putative ferredoxin [Clostridium perfringens E str. JGS1987] gi|170710749|gb|EDT22931.1| putative ferredoxin [Clostridium perfringens B str. ATCC 3626] gi|170713813|gb|EDT25995.1| putative ferredoxin [Clostridium perfringens CPE str. F4969] gi|177908707|gb|EDT71218.1| putative ferredoxin [Clostridium perfringens D str. JGS1721] gi|182380036|gb|EDT77515.1| putative ferredoxin [Clostridium perfringens NCTC 8239] Length = 56 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + + C+ C C CPVD +G+ I D CIDCG C CPV A Sbjct: 1 MAYKILDTCVSCGA--CAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGA 52 >gi|296109957|ref|YP_003616906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434771|gb|ADG13942.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 252 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 25/40 (62%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP+DC Y+ + I D+C+ C +CE CP AIK Sbjct: 201 CVEECPIDCIYDIGGVVEIDNDKCVLCRICEEVCPTKAIK 240 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 I CK C + CPVD + A+ D CI C +C CPVDAI Sbjct: 42 ICCKCNLCYKECPVDAIERAKVKRAVKIKDNCIKCEICAKTCPVDAI 88 >gi|32265726|ref|NP_859758.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter hepaticus ATCC 51449] gi|32261774|gb|AAP76824.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter hepaticus ATCC 51449] Length = 209 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V+ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 62 AVSIACMHCADAPCAKVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGA 113 >gi|310830102|ref|YP_003962459.1| Ferredoxin [Eubacterium limosum KIST612] gi|308741836|gb|ADO39496.1| Ferredoxin [Eubacterium limosum KIST612] Length = 56 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C + CPV+ EG + I C DCG C +CPV+AI P+ Sbjct: 1 MAYKITDECIACGS--CADQCPVEAISEG-SIYEIDEALCTDCGACADQCPVEAIVPE 55 >gi|119872881|ref|YP_930888.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674289|gb|ABL88545.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 368 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C CV CP F Y + + D CIDCG+C CPV+A+K + P Sbjct: 84 CIWCGM--CVRSCPATAFEYVERKSIRVRYDRCIDCGLCNAVCPVEAVKMPSLP 135 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C LC CV VCP D L + P CI CGVC +CP IK Sbjct: 252 VAGGCTLCGA--CVNVCPTDALSIKGFELRLTPALCIACGVCVEKCPEKVIK 301 >gi|291515570|emb|CBK64780.1| 4Fe-4S binding domain [Alistipes shahii WAL 8301] Length = 55 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T++C+ C C+ CPV+ G+ ++ I D+CIDCG C CP +AI Sbjct: 1 MAYKITDSCVACGS--CIGECPVEAISAGDIYV-IDADKCIDCGTCAGVCPSEAI 52 >gi|257466098|ref|ZP_05630409.1| hydrogenase, Fe-only [Fusobacterium gonidiaformans ATCC 25563] gi|315917255|ref|ZP_07913495.1| hydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|313691130|gb|EFS27965.1| hydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 652 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + +FL C CG C CPV AI Sbjct: 217 LKFKITEKCIGC--TACARVCPVQCITGAPKKRHFL--DTSRCTHCGQCVSACPVGAI 270 >gi|225018512|ref|ZP_03707704.1| hypothetical protein CLOSTMETH_02459 [Clostridium methylpentosum DSM 5476] gi|224948713|gb|EEG29922.1| hypothetical protein CLOSTMETH_02459 [Clostridium methylpentosum DSM 5476] Length = 203 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +T++CI C C +CP C G ++ I C+ CG+C+ +CPV AI+ E Sbjct: 149 FQITDSCIECGR--CRRICPQQCIEPGSPYV-IRQQNCLHCGLCQEQCPVQAIERKGE 203 >gi|260772826|ref|ZP_05881742.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio metschnikovii CIP 69.14] gi|260611965|gb|EEX37168.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio metschnikovii CIP 69.14] Length = 202 Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF + E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVKTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|320640863|gb|EFX10351.1| putative polyferredoxin [Escherichia coli O157:H7 str. G5101] Length = 284 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CIDC VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSP 69 >gi|257452106|ref|ZP_05617405.1| hydrogenase, Fe-only [Fusobacterium sp. 3_1_5R] gi|317058652|ref|ZP_07923137.1| hydrogenase [Fusobacterium sp. 3_1_5R] gi|313684328|gb|EFS21163.1| hydrogenase [Fusobacterium sp. 3_1_5R] Length = 652 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + +FL C CG C CPV AI Sbjct: 217 LKFKITEKCIGC--TACARVCPVQCITGAPKKRHFL--DTSRCTHCGQCVSACPVGAI 270 >gi|257066578|ref|YP_003152834.1| NADH dehydrogenase (quinone) [Anaerococcus prevotii DSM 20548] gi|256798458|gb|ACV29113.1| NADH dehydrogenase (quinone) [Anaerococcus prevotii DSM 20548] Length = 526 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y + E+CI C C +CP + E I+ D+CI CG C+ CP++AI Sbjct: 470 LNYTIGEDCIGCG--KCKRLCPNEAIAGEARKKHEINQDKCIKCGQCKDNCPINAI 523 >gi|87302718|ref|ZP_01085529.1| ferredoxin [Synechococcus sp. WH 5701] gi|87282601|gb|EAQ74559.1| ferredoxin [Synechococcus sp. WH 5701] Length = 74 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C + G+ +F I+ D CIDCG+C CPV AI P+ L+ Sbjct: 14 ADCVDACPVACIHPGQGANSKGTSFYWINFDTCIDCGICLQVCPVSGAILPEERADLQ 71 >gi|229588699|ref|YP_002870818.1| putative electron transpor-like protein [Pseudomonas fluorescens SBW25] gi|229360565|emb|CAY47422.1| putative electron transpor-related protein [Pseudomonas fluorescens SBW25] Length = 387 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 73 VAYIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIIDECTGCDLCVAPCPVDCIE 127 >gi|325833701|ref|ZP_08166116.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325485241|gb|EGC87711.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 381 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 3 YVVTENCILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 >gi|320667607|gb|EFX34522.1| putative polyferredoxin [Escherichia coli O157:H7 str. LSU-61] Length = 284 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CIDC VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSP 69 >gi|261403301|ref|YP_003247525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370294|gb|ACX73043.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 154 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C++ C E+CPVD Y + + ++CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKDGIPIVSKEKCIACGMCALACPIGAI 88 >gi|257790390|ref|YP_003180996.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474287|gb|ACV54607.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 381 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 3 YVVTENCILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 >gi|310777828|ref|YP_003966161.1| electron transport complex, RnfABCDGE type, B subunit [Ilyobacter polytropus DSM 2926] gi|309747151|gb|ADO81813.1| electron transport complex, RnfABCDGE type, B subunit [Ilyobacter polytropus DSM 2926] Length = 334 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CV CPVD N I P++CI CG+C +CP +AI + + Sbjct: 224 CVRACPVDAIDLNNNLAKIDPEKCIQCGLCAIKCPTNAITSEVK 267 >gi|295111792|emb|CBL28542.1| Uncharacterized Fe-S center protein [Synergistetes bacterium SGP1] Length = 370 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 +V E CI C CV +C D + A I D C+ CG C CPVDA+ PD + Sbjct: 192 HVEQEKCICCGR--CVRICAHDAPHVTPGRGATIDHDRCVGCGRCIGACPVDAVAPDYDE 249 Query: 62 GLEL 65 ++ Sbjct: 250 AFDI 253 >gi|149194135|ref|ZP_01871233.1| HYDROGENASE-3 SMALL SUBUNIT [Caminibacter mediatlanticus TB-2] gi|149136088|gb|EDM24566.1| HYDROGENASE-3 SMALL SUBUNIT [Caminibacter mediatlanticus TB-2] Length = 187 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 29/60 (48%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V+ C C C VCPV GE+ + ++ + CI C +C CP AI+P E Sbjct: 48 MYGVMPNQCRQCDDAPCANVCPVGALRFGEDEIELYEEICIGCKLCSIACPFGAIRPAAE 107 >gi|164687084|ref|ZP_02211112.1| hypothetical protein CLOBAR_00710 [Clostridium bartlettii DSM 16795] gi|164603969|gb|EDQ97434.1| hypothetical protein CLOBAR_00710 [Clostridium bartlettii DSM 16795] Length = 56 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y++ + CI C C CPV+C G++ I D CI+CG C CPV+A Sbjct: 1 MAYIIGDACISCGA--CESECPVECISAGDDKYVIDADSCIECGSCADVCPVEA 52 >gi|320646306|gb|EFX15233.1| putative polyferredoxin [Escherichia coli O157:H- str. 493-89] gi|320651811|gb|EFX20191.1| putative polyferredoxin [Escherichia coli O157:H- str. H 2687] Length = 284 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CIDC VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSP 69 >gi|303229419|ref|ZP_07316209.1| ferredoxin [Veillonella atypica ACS-134-V-Col7a] gi|303231397|ref|ZP_07318131.1| ferredoxin [Veillonella atypica ACS-049-V-Sch6] gi|302513993|gb|EFL56001.1| ferredoxin [Veillonella atypica ACS-049-V-Sch6] gi|302515955|gb|EFL57907.1| ferredoxin [Veillonella atypica ACS-134-V-Col7a] Length = 54 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV EGE I+ D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCGS--CASVCPVAAISEGETKYEIN-DTCIDCGSCESVCPVSVISAE 54 >gi|269102696|ref|ZP_06155393.1| formate dehydrogenase-O iron-sulfur subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268162594|gb|EEZ41090.1| formate dehydrogenase-O iron-sulfur subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 207 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK-PDTEPG 62 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + P + Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSQTEDGIVQHNKDLCIGCGYCLFACPFGAPQFPKQQAF 112 Query: 63 LELWLKINSEYATQWPNI--TTKKESL 87 E Y + PN ++KE L Sbjct: 113 AERGKMDKCTYCSGGPNTEPGSEKERL 139 >gi|317488807|ref|ZP_07947340.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912112|gb|EFV33688.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 381 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 3 YVVTENCILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 >gi|307729116|ref|YP_003906340.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1003] gi|307583651|gb|ADN57049.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1003] Length = 412 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D EN + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDENNYVVKADVCNGCMACVPPCPTGAI 64 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|240145814|ref|ZP_04744415.1| periplasmic [Fe] hydrogenase 1 [Roseburia intestinalis L1-82] gi|257202092|gb|EEV00377.1| periplasmic [Fe] hydrogenase 1 [Roseburia intestinalis L1-82] Length = 348 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|16330286|ref|NP_441014.1| ferredoxin [Synechocystis sp. PCC 6803] gi|1652775|dbj|BAA17694.1| ferredoxin [Synechocystis sp. PCC 6803] Length = 75 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-------ECIDCGVCEPECPVD-AI 55 +VTE C DCVE CPV C + G+ I D CIDCG+C CPV+ AI Sbjct: 5 IVTETCE--GVADCVEACPVACIHPGDGKNTIGTDWYWIDFATCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P+ P L+ Sbjct: 63 LPEERPDLQ 71 >gi|225181373|ref|ZP_03734817.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167954|gb|EEG76761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 54 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 4/55 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MTY +T+ C+ C C++ CP D EG+ + D+C +CG+C ECP DAI Sbjct: 1 MTYKITDECVACGA--CLDSCPSDAIVEGDVYTI--NDDCAECGLCVDECPSDAI 51 >gi|254491904|ref|ZP_05105083.1| 4Fe-4S binding domain protein [Methylophaga thiooxidans DMS010] gi|224463382|gb|EEF79652.1| 4Fe-4S binding domain protein [Methylophaga thiooxydans DMS010] Length = 194 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCPVDCFY ++ + +H D CI CG C CP A Sbjct: 51 ISVACMHCTDAPCQAVCPVDCFYTTDDGVVLHDKDICIGCGYCFYACPFGA 101 >gi|327310505|ref|YP_004337402.1| 4Fe-4S ferredoxin [Thermoproteus uzoniensis 768-20] gi|326946984|gb|AEA12090.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoproteus uzoniensis 768-20] Length = 100 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLEL 65 E C LC+ C +CP C+ + + + + + C++CG C CP + I + G+ + Sbjct: 36 EKCRLCEKKPCTYMCPAKCYVQQGDIVVLSTEACLECGTCRVVCPYENIDWNYPRSGMGV 95 Query: 66 WLKIN 70 W + + Sbjct: 96 WYRFS 100 >gi|257463022|ref|ZP_05627425.1| hydrogenase, Fe-only [Fusobacterium sp. D12] Length = 652 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + +FL C CG C CPV AI Sbjct: 217 LKFKITEKCIGC--TACARVCPVKCIAGAPKKRHFL--DTSRCTHCGQCVSACPVGAI 270 >gi|238795930|ref|ZP_04639442.1| hypothetical protein ymoll0001_23270 [Yersinia mollaretii ATCC 43969] gi|238720135|gb|EEQ11939.1| hypothetical protein ymoll0001_23270 [Yersinia mollaretii ATCC 43969] Length = 533 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C H CV+VCP Y + + ++PD C+ C C CP V I P T+ Sbjct: 80 SCQHCDHAPCVDVCPTGASYRDKATGIIDVNPDLCVGCQYCIAACPYRVRFIHPVTK 136 >gi|20089906|ref|NP_615981.1| hypothetical protein MA1031 [Methanosarcina acetivorans C2A] gi|19914861|gb|AAM04461.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 377 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ T NC LCK CV C V E + L I+ ++CI C C CP DA++ Sbjct: 311 FINTSNCKLCKA--CVLNCSVHAIEETGSALKINQEKCIQCYCCRELCPSDAVEIKKSML 368 Query: 63 LELWLKI 69 L+L +I Sbjct: 369 LKLVTRI 375 >gi|150389480|ref|YP_001319529.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949342|gb|ABR47870.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 370 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 5 VTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V EN CI C+ CVE CPVD + + I P+ CI CG C CP AI+ + Sbjct: 191 VMENLCIGCQM--CVENCPVDAIHMEDKKAVIDPEVCIGCGECITVCPKRAIEVQWKTDA 248 Query: 64 ELWLKINSEYA 74 ++++ +EYA Sbjct: 249 NIFVEKMAEYA 259 >gi|126698470|ref|YP_001087367.1| iron-dependent hydrogenase [Clostridium difficile 630] gi|260682591|ref|YP_003213876.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260686191|ref|YP_003217324.1| iron-dependent hydrogenase [Clostridium difficile R20291] gi|260208754|emb|CBA61609.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260212207|emb|CBE02898.1| iron-dependent hydrogenase [Clostridium difficile R20291] Length = 509 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP + ++ EN A IH D+C++CG C CP AI K P ++ Sbjct: 177 CKSVCPTNALGFDRENMKAMIHEDKCLNCGACMSACPFGAISDKSLIAPVARKLVQKEKM 236 Query: 73 YATQWPNITTKKES 86 YA P IT + E+ Sbjct: 237 YAVVAPAITGQVEA 250 >gi|295110160|emb|CBL24113.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus obeum A2-162] Length = 501 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+V+ C C C++ CP + I D+CI CG C+ CP DAI + P Sbjct: 115 YIVSNMCRGCVAHPCMQACPKGAISMKDGKSYIDQDKCIKCGKCKASCPYDAISHNVRP 173 >gi|318041465|ref|ZP_07973421.1| ferredoxin [Synechococcus sp. CB0101] Length = 74 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G F I D CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVDACPVACINPGSGANAKGTGFYWIDFDTCIDCGICLQVCPVEGAIVPEEKPDLQ 71 >gi|254974515|ref|ZP_05270987.1| iron-dependent hydrogenase [Clostridium difficile QCD-66c26] gi|255091906|ref|ZP_05321384.1| iron-dependent hydrogenase [Clostridium difficile CIP 107932] gi|255100005|ref|ZP_05328982.1| iron-dependent hydrogenase [Clostridium difficile QCD-63q42] gi|255305892|ref|ZP_05350064.1| iron-dependent hydrogenase [Clostridium difficile ATCC 43255] gi|255313640|ref|ZP_05355223.1| iron-dependent hydrogenase [Clostridium difficile QCD-76w55] gi|255516324|ref|ZP_05384000.1| iron-dependent hydrogenase [Clostridium difficile QCD-97b34] gi|255649423|ref|ZP_05396325.1| iron-dependent hydrogenase [Clostridium difficile QCD-37x79] gi|306519504|ref|ZP_07405851.1| iron-dependent hydrogenase [Clostridium difficile QCD-32g58] gi|328887576|emb|CAJ67726.2| putative iron-dependent hydrogenase [Clostridium difficile] Length = 496 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP + ++ EN A IH D+C++CG C CP AI K P ++ Sbjct: 164 CKSVCPTNALGFDRENMKAMIHEDKCLNCGACMSACPFGAISDKSLIAPVARKLVQKEKM 223 Query: 73 YATQWPNITTKKES 86 YA P IT + E+ Sbjct: 224 YAVVAPAITGQVEA 237 >gi|86609930|ref|YP_478692.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558472|gb|ABD03429.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 75 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCVE CPV C + +G ++ I CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPVEGAILPEEKPHLQ 71 >gi|237736266|ref|ZP_04566747.1| electron transport complex protein [Fusobacterium mortiferum ATCC 9817] gi|229421614|gb|EEO36661.1| electron transport complex protein [Fusobacterium mortiferum ATCC 9817] Length = 329 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 23/45 (51%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C + CPV N I P +CI CG+C +CP AI D EP Sbjct: 224 CAKNCPVGAITVENNLAKIDPAKCISCGICATKCPTKAIVSDVEP 268 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Query: 14 HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP--VDAIKPDTE 60 H DC +VCPV E +A + D+CI CG+C+ CP V A+ P ++ Sbjct: 146 HGDCEKVCPVGAIKVNEKGIAEVDEDKCISCGLCQKACPKKVIAMLPQSK 195 >gi|302339374|ref|YP_003804580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636559|gb|ADK81986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 56 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T++C C C CPV+ E ++ I PD+C CG C CPV+AI D Sbjct: 1 MAYKITDDCTNCGA--CEAECPVEAISEKDDHRWIDPDQCTSCGTCAEVCPVEAILAD 56 >gi|150015010|ref|YP_001307264.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149901475|gb|ABR32308.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 56 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A Sbjct: 1 MAFVINDSCVSCGA--CAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGA 52 >gi|289675306|ref|ZP_06496196.1| ferredoxin [Pseudomonas syringae pv. syringae FF5] Length = 58 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 17/34 (50%), Positives = 27/34 (79%) Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 G+E ++++N+E A WPNIT KK+++P AA+ DG Sbjct: 15 GMENFIELNAELAEVWPNITEKKDAMPDAAEWDG 48 >gi|262402193|ref|ZP_06078754.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC586] gi|262350975|gb|EEZ00108.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC586] Length = 202 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|15832635|ref|NP_311408.1| polyferredoxin [Escherichia coli O157:H7 str. Sakai] gi|168748422|ref|ZP_02773444.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4113] gi|168756291|ref|ZP_02781298.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4401] gi|168761129|ref|ZP_02786136.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4501] gi|168768611|ref|ZP_02793618.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4486] gi|168773567|ref|ZP_02798574.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4196] gi|168778485|ref|ZP_02803492.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4076] gi|168787865|ref|ZP_02812872.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC869] gi|168798890|ref|ZP_02823897.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC508] gi|195936661|ref|ZP_03082043.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4024] gi|208809392|ref|ZP_03251729.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4206] gi|208812703|ref|ZP_03254032.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4045] gi|208821200|ref|ZP_03261520.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4042] gi|209398407|ref|YP_002271989.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4115] gi|217327417|ref|ZP_03443500.1| putative polyferredoxin [Escherichia coli O157:H7 str. TW14588] gi|261223049|ref|ZP_05937330.1| putative polyferredoxin [Escherichia coli O157:H7 str. FRIK2000] gi|261259400|ref|ZP_05951933.1| putative polyferredoxin [Escherichia coli O157:H7 str. FRIK966] gi|13362851|dbj|BAB36804.1| putative polyferredoxin [Escherichia coli O157:H7 str. Sakai] gi|187770682|gb|EDU34526.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4196] gi|188017040|gb|EDU55162.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4113] gi|189003633|gb|EDU72619.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4076] gi|189356572|gb|EDU74991.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4401] gi|189362196|gb|EDU80615.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4486] gi|189368440|gb|EDU86856.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4501] gi|189372305|gb|EDU90721.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC869] gi|189378670|gb|EDU97086.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC508] gi|208729193|gb|EDZ78794.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4206] gi|208733980|gb|EDZ82667.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4045] gi|208741323|gb|EDZ89005.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4042] gi|209159807|gb|ACI37240.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4115] gi|217319784|gb|EEC28209.1| putative polyferredoxin [Escherichia coli O157:H7 str. TW14588] gi|320188852|gb|EFW63511.1| Putative polyferredoxin [Escherichia coli O157:H7 str. EC1212] gi|326340317|gb|EGD64121.1| Putative polyferredoxin [Escherichia coli O157:H7 str. 1125] gi|326345001|gb|EGD68745.1| Putative polyferredoxin [Escherichia coli O157:H7 str. 1044] Length = 284 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CIDC VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSP 69 >gi|187932652|ref|YP_001884615.1| iron-dependent hydrogenase [Clostridium botulinum B str. Eklund 17B] gi|187720805|gb|ACD22026.1| iron-dependent hydrogenase [Clostridium botulinum B str. Eklund 17B] Length = 494 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C VC E I PD+C +CG+C+ CP DAI D P Sbjct: 104 FEVTDACRNCIAHKCQSVCNFGAITYVEGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 >gi|186476296|ref|YP_001857766.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phymatum STM815] gi|184192755|gb|ACC70720.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phymatum STM815] Length = 416 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D + + PD C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCPTGAI 64 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI+ D Sbjct: 15 IDPEICIRCNTCEETCPIDAIQHD 38 >gi|317485201|ref|ZP_07944082.1| dimethylsulfoxide reductase [Bilophila wadsworthia 3_1_6] gi|316923492|gb|EFV44697.1| dimethylsulfoxide reductase [Bilophila wadsworthia 3_1_6] Length = 209 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y V+ +C C++ C E CP ++ EN +++ PD C+ C CE CP A + D Sbjct: 59 FAYYVSLSCNHCENPVCAEACPTQAMHKDENGIVSVDPDRCVGCRYCEWNCPYGAPQFDP 118 Query: 60 E 60 E Sbjct: 119 E 119 >gi|224437316|ref|ZP_03658288.1| putative formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] Length = 211 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 66 ISIACMHCADAPCAKVCPVDCFYIRADGIVLHNKKTCIGCGYCLYACPFGA 116 >gi|319428322|gb|ADV56396.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens 200] Length = 553 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|146291447|ref|YP_001181871.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563137|gb|ABP74072.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 553 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQNTLKEEA 492 >gi|229529447|ref|ZP_04418837.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae 12129(1)] gi|229333221|gb|EEN98707.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae 12129(1)] Length = 202 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|158520200|ref|YP_001528070.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509026|gb|ABW65993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 386 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 14/75 (18%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAI 55 + TE C LC CV+ CPV+ Y +NF+A++ EC+ CGVC C +AI Sbjct: 302 IKTEECNLC--MACVDKCPVNALYHHKPHKDDGSDNFIALNESECLGCGVCVMACDNEAI 359 Query: 56 K----PDTEPGLELW 66 + DT P +++ Sbjct: 360 QLVKVRDTVPEIDVL 374 >gi|33865811|ref|NP_897370.1| ferredoxin [Synechococcus sp. WH 8102] gi|33632981|emb|CAE07792.1| ferredoxin [Synechococcus sp. WH 8102] Length = 74 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G+ +F I+ D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVDACPVACIDQGQGKNKKGTDFYWINFDTCIDCGICLQVCPVEGAILAEERPDLQ 71 >gi|306821643|ref|ZP_07455241.1| NADH dehydrogenase (quinone) [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550388|gb|EFM38381.1| NADH dehydrogenase (quinone) [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 527 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + Y +TE CI C T C VCPV C + I +CI CG C CPV AI+ Sbjct: 471 LKYYITEKCIGC--TKCANVCPVKCIDGSIKKRHVITAQQCIKCGQCYEACPVHAIE 525 >gi|119872161|ref|YP_930168.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673569|gb|ABL87825.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 96 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLEL 65 E C C+ C +CP C+ + +++ + + C++CG C CP + I+ + G+ + Sbjct: 32 EQCRKCEKKPCTYMCPAKCYVQQGDYVVLSTEACVECGTCRVVCPYNNIEWNYPRSGMGI 91 Query: 66 WLKI 69 W + Sbjct: 92 WYRF 95 >gi|57169093|ref|ZP_00368220.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter coli RM2228] gi|305432302|ref|ZP_07401465.1| formate dehydrogenase [Campylobacter coli JV20] gi|57019551|gb|EAL56242.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter coli RM2228] gi|304444650|gb|EFM37300.1| formate dehydrogenase [Campylobacter coli JV20] Length = 213 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCAIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|296272270|ref|YP_003654901.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096445|gb|ADG92395.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 186 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 27/52 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C VCPV G++ + +H + CI C +C CP AI+P+ E Sbjct: 56 CRQCDDAPCANVCPVGALEFGKDSILVHEELCIGCKMCTLVCPFGAIRPEAE 107 >gi|288560652|ref|YP_003424138.1| energy-converting hydrogenase A subunit Q EhaQ [Methanobrevibacter ruminantium M1] gi|288543362|gb|ADC47246.1| energy-converting hydrogenase A subunit Q EhaQ [Methanobrevibacter ruminantium M1] Length = 483 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI---KPDTEP 61 E CI C C+ VCP+D Y+ EN I DE C C +C CP DAI K +EP Sbjct: 22 NEKCINCSDKPCLGVCPIDAVYQDENTKLIKLDEHCFGCVLCSNACPYDAIHIKKTLSEP 81 Query: 62 GLELWLKINSE 72 E IN + Sbjct: 82 IRENVPNINKK 92 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C++ CPVD ++ + ++ DECI C CE CPV+A + T Sbjct: 436 CIKNCPVDAMSVEDDMITVNHDECISCRNCEGICPVNAARVST 478 >gi|325294718|ref|YP_004281232.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065166|gb|ADY73173.1| Glutamate synthase (NADPH) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 505 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 C+ CK CV+ C D Y E+ I + C++C CE CP DAIK P Sbjct: 22 CVRCK--SCVDQCSFDATYYDEDLEMIVNRNENCVNCKRCEAFCPTDAIKVVKNP 74 >gi|304317218|ref|YP_003852363.1| ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778720|gb|ADL69279.1| Ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 504 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP + I D+CI+CG C+ CP +AI + P Sbjct: 100 YRVTEACRGCITHRCTEVCPKGAISIIDRKSHIDYDKCIECGRCKEACPYNAISDNLRP 158 >gi|33862969|ref|NP_894529.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9313] gi|33634886|emb|CAE20872.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9313] Length = 74 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DC + CPV C +G NF I+ D CIDCG+C CPV+ A+ P+ L+ Sbjct: 14 ADCAQACPVGCIQPGQGKNNKGRNFYLINFDICIDCGICLQVCPVEGAVLPEERRDLQ 71 >gi|238924739|ref|YP_002938255.1| ferredoxin hydrogenase [Eubacterium rectale ATCC 33656] gi|238876414|gb|ACR76121.1| ferredoxin hydrogenase [Eubacterium rectale ATCC 33656] gi|291526109|emb|CBK91696.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale DSM 17629] Length = 485 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEAGRLRSHIDPQKCKECGRCAQACPYNAIAHLKRP 151 >gi|15641521|ref|NP_231153.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587191|ref|ZP_01676965.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 2740-80] gi|121726940|ref|ZP_01680141.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V52] gi|147675071|ref|YP_001217065.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|153214795|ref|ZP_01949624.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 1587] gi|153801187|ref|ZP_01955773.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-3] gi|153818524|ref|ZP_01971191.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae NCTC 8457] gi|153822821|ref|ZP_01975488.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae B33] gi|153824883|ref|ZP_01977550.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-2] gi|153829769|ref|ZP_01982436.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 623-39] gi|227081670|ref|YP_002810221.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae M66-2] gi|229508540|ref|ZP_04398043.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae BX 330286] gi|229511389|ref|ZP_04400868.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae B33] gi|229514918|ref|ZP_04404378.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TMA 21] gi|229518528|ref|ZP_04407971.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC9] gi|229520548|ref|ZP_04409972.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TM 11079-80] gi|229523595|ref|ZP_04413000.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae bv. albensis VL426] gi|229607945|ref|YP_002878593.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254226566|ref|ZP_04920148.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V51] gi|254848633|ref|ZP_05237983.1| formate dehydrogenase [Vibrio cholerae MO10] gi|255745047|ref|ZP_05418997.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholera CIRS 101] gi|261211641|ref|ZP_05925928.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC341] gi|262161666|ref|ZP_06030684.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae INDRE 91/1] gi|262169544|ref|ZP_06037235.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC27] gi|262190850|ref|ZP_06049070.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae CT 5369-93] gi|297579081|ref|ZP_06941009.1| formate dehydrogenase [Vibrio cholerae RC385] gi|9656016|gb|AAF94667.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548534|gb|EAX58588.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 2740-80] gi|121630702|gb|EAX63089.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V52] gi|124115137|gb|EAY33957.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 1587] gi|124123307|gb|EAY42050.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-3] gi|125620902|gb|EAZ49254.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V51] gi|126510927|gb|EAZ73521.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae NCTC 8457] gi|126519680|gb|EAZ76903.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae B33] gi|146316954|gb|ABQ21493.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|148874748|gb|EDL72883.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 623-39] gi|149741601|gb|EDM55631.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-2] gi|227009558|gb|ACP05770.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae M66-2] gi|227013426|gb|ACP09636.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|229337176|gb|EEO02193.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae bv. albensis VL426] gi|229342372|gb|EEO07366.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TM 11079-80] gi|229343217|gb|EEO08192.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC9] gi|229347623|gb|EEO12582.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TMA 21] gi|229351354|gb|EEO16295.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae B33] gi|229354494|gb|EEO19417.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae BX 330286] gi|229370600|gb|ACQ61023.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254844338|gb|EET22752.1| formate dehydrogenase [Vibrio cholerae MO10] gi|255737518|gb|EET92913.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholera CIRS 101] gi|260838991|gb|EEX65623.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC341] gi|262021778|gb|EEY40488.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC27] gi|262028398|gb|EEY47053.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae INDRE 91/1] gi|262033269|gb|EEY51787.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae CT 5369-93] gi|297536675|gb|EFH75508.1| formate dehydrogenase [Vibrio cholerae RC385] Length = 202 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|262165716|ref|ZP_06033453.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus VM223] gi|262171469|ref|ZP_06039147.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus MB-451] gi|261892545|gb|EEY38531.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus MB-451] gi|262025432|gb|EEY44100.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus VM223] Length = 202 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|120600652|ref|YP_965226.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560745|gb|ABM26672.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 553 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|78043298|ref|YP_360068.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995413|gb|ABB14312.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 893 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 4 VVTENCILCKHTDCVEVCP--VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ E C C CV VCP V G+N I P C CG+C ECP AI + P Sbjct: 820 VIEEKCAAC--LTCVRVCPYSVPVVINGKNVAYIDPISCQGCGICASECPNKAIVQNNRP 877 >gi|291527156|emb|CBK92742.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale M104/1] Length = 485 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEAGRLRSHIDPQKCKECGRCAQACPYNAIAHLKRP 151 >gi|298498401|ref|ZP_07008208.1| formate dehydrogenase [Vibrio cholerae MAK 757] gi|297542734|gb|EFH78784.1| formate dehydrogenase [Vibrio cholerae MAK 757] Length = 202 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|254286426|ref|ZP_04961384.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae AM-19226] gi|150423593|gb|EDN15536.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae AM-19226] Length = 202 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|145591121|ref|YP_001153123.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282889|gb|ABP50471.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 373 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV VCP D + L + P CI CGVC +CP I+ +P Sbjct: 255 VKEGCTLCGA--CVNVCPTDALSIKGHELRLVPALCIACGVCAEKCPEGVIEIRQQP 309 Score = 40.4 bits (93), Expect = 0.070, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK----PD 58 V + CI C C CP F Y + + D C+DCG+C CPVDAIK PD Sbjct: 82 VRQDKCIWCGL--CAGYCPASAFEYVERAVVRVKYDLCVDCGLCNSVCPVDAIKMPSLPD 139 Query: 59 T 59 T Sbjct: 140 T 140 >gi|110802368|ref|YP_699704.1| ferredoxin (fdxA) [Clostridium perfringens SM101] gi|110682869|gb|ABG86239.1| putative ferredoxin [Clostridium perfringens SM101] Length = 69 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + + C+ C C CPVD +G+ I D CIDCG C CPV A Sbjct: 14 MAYKILDTCVSCGA--CAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGA 65 >gi|45359065|ref|NP_988622.1| hypothetical protein MMP1502 [Methanococcus maripaludis S2] gi|45047940|emb|CAF31058.1| conserved archaeal protein, pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] Length = 138 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--------- 58 C+ C+ C+ VCP D + + + +HP++C+ C +C CPV AI+ D Sbjct: 34 RCMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRGTKVAVKC 93 Query: 59 ---TEPGLELWLKINSEYATQW--PNITTKKESLPSAAK 92 E G E+ L++ A + I K+ L S K Sbjct: 94 DGCIERGSEVCLEVCPTKALDYYENTIENKRAELVSKLK 132 >gi|149908806|ref|ZP_01897466.1| putative formate dehydrogenase, iron-sulfur subunit [Moritella sp. PE36] gi|149808080|gb|EDM68021.1| putative formate dehydrogenase, iron-sulfur subunit [Moritella sp. PE36] Length = 205 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK-PDTEPG 62 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFERTEDGIVLHDKDLCIGCGYCLFACPFGAPQFPKQDAF 112 Query: 63 LELWLKINSEYATQWPNITTKKE 85 E + PN+ E Sbjct: 113 AERGKMDKCTFCAGGPNVENGSE 135 >gi|121535575|ref|ZP_01667382.1| hydrogenase large subunit domain protein [Thermosinus carboxydivorans Nor1] gi|121305815|gb|EAX46750.1| hydrogenase large subunit domain protein [Thermosinus carboxydivorans Nor1] Length = 499 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C+ CP +N I + C++CG+C+ CP AI + P Sbjct: 106 FIVTDACRNCVAHHCINSCPKKAIAVVQNRAFIDKNRCVECGLCKRSCPYGAIIEVSRP 164 >gi|317060630|ref|ZP_07925115.1| hydrogenase [Fusobacterium sp. D12] gi|313686306|gb|EFS23141.1| hydrogenase [Fusobacterium sp. D12] Length = 599 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + +FL C CG C CPV AI Sbjct: 164 LKFKITEKCIGC--TACARVCPVKCIAGAPKKRHFL--DTSRCTHCGQCVSACPVGAI 217 >gi|258622879|ref|ZP_05717895.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM573] gi|258625040|ref|ZP_05719961.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM603] gi|258582673|gb|EEW07501.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM603] gi|258584818|gb|EEW09551.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM573] Length = 199 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 50 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 100 >gi|11465802|ref|NP_053946.1| hypothetical protein PopuCp151 [Porphyra purpurea] gi|1723405|sp|P51336|YCXI_PORPU RecName: Full=Uncharacterized protein in rpl9-rpl11 intergenic region; AltName: Full=ORF75 gi|1276802|gb|AAC08222.1| ORF75 [Porphyra purpurea] Length = 75 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 10/73 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-------ECIDCGVCEPECPVD-AI 55 +VTE CI +CV CPV C ++GE I+ D CIDC +C CP AI Sbjct: 5 IVTEKCI--GVAECVNACPVSCIHKGEGKNTINKDWYWIDFAACIDCSICIQVCPTKGAI 62 Query: 56 KPDTEPGLELWLK 68 EP L+ L+ Sbjct: 63 LDKEEPSLQRKLR 75 >gi|300857164|ref|YP_003782148.1| putative electron transfer flavoprotein subunit alpha [Clostridium ljungdahlii DSM 13528] gi|300437279|gb|ADK17046.1| predicted electron transfer flavoprotein alpha subunit [Clostridium ljungdahlii DSM 13528] Length = 429 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++T++CI C+ C+ +CP D GE L ++C +CG C CPV A+ Sbjct: 1 MAVIITDSCIGCE--SCIPICPFDALGINGEGKLVASKEKCTECGKCVSVCPVSAL 54 >gi|260768419|ref|ZP_05877353.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio furnissii CIP 102972] gi|260616449|gb|EEX41634.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio furnissii CIP 102972] gi|315180130|gb|ADT87044.1| formate dehydrogenase, iron-sulfur subunit [Vibrio furnissii NCTC 11218] Length = 202 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|297587236|ref|ZP_06945881.1| NADH dehydrogenase (quinone) [Finegoldia magna ATCC 53516] gi|297575217|gb|EFH93936.1| NADH dehydrogenase (quinone) [Finegoldia magna ATCC 53516] Length = 626 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C EGE I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCI-EGEVKKQHVIDKSQCIKCGNCETVCPVHAV 623 >gi|182420065|ref|ZP_02951299.1| conserved domain protein [Clostridium butyricum 5521] gi|237666800|ref|ZP_04526785.1| conserved domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376102|gb|EDT73689.1| conserved domain protein [Clostridium butyricum 5521] gi|237657999|gb|EEP55554.1| ferredoxin, 4Fe-4S [Clostridium butyricum E4 str. BoNT E BL5262] Length = 56 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A Sbjct: 1 MAFVINDSCVSCGA--CAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGA 52 >gi|330445947|ref|ZP_08309599.1| formate dehydrogenase iron-sulfur subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490138|dbj|GAA04096.1| formate dehydrogenase iron-sulfur subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 205 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK-PDTEPG 62 ++ C+ C C+ VCP DCF E+ + H D CI CG C CP A + P E Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSHTEDGIVQHNKDLCIGCGYCLFACPFGAPQFPKQEAF 112 Query: 63 LELWLKINSEYATQWPN 79 E Y + PN Sbjct: 113 AERGKMDKCTYCSGGPN 129 >gi|150401595|ref|YP_001325361.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014298|gb|ABR56749.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 151 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C++ C +CPVD Y + + + CI CG+CE CPV +I D + L Sbjct: 42 CMQCENAPCYNICPVDAIYLKDGIPLVKKERCIGCGMCEIVCPVGSIFIDKLYAHKCSLC 101 Query: 69 INSEYATQWPNITTKKESLPSAAK--MDGVKQKYEKYF 104 ++++ T K ++L +D +K++ K Sbjct: 102 LDTDRITPACLEACKDKALKLVCDECIDSIKEERRKKL 139 >gi|91773531|ref|YP_566223.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanococcoides burtonii DSM 6242] gi|91712546|gb|ABE52473.1| 4Fe-4S ferredoxin, iron-sulfur protein [Methanococcoides burtonii DSM 6242] Length = 58 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV+ CP + +GEN ++ DECIDCG C CP DAI Sbjct: 16 CVDDCPSEAISMDGENIAVVNADECIDCGACVDSCPTDAIS 56 >gi|317489682|ref|ZP_07948186.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911276|gb|EFV32881.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 237 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C++ CV VCPV Y GE+ + I D CI C C CP A D Sbjct: 85 CMQCENPACVSVCPVSATYRGEDGIVVIDADRCIGCKYCIAACPYGARSAD 135 >gi|313143772|ref|ZP_07805965.1| formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] gi|313128803|gb|EFR46420.1| formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] Length = 204 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C +VCPVDCFY + + +H + CI CG C CP A Sbjct: 59 ISIACMHCADAPCAKVCPVDCFYIRADGIVLHNKKTCIGCGYCLYACPFGA 109 >gi|296184817|ref|ZP_06853228.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|296050599|gb|EFG90022.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 495 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y VT+ C C C+EVCP + I+ + C +CG+C CP AI P Sbjct: 104 YTVTDACRGCIQHKCMEVCPANAITRVAGSAYINQELCKECGMCRKSCPYGAIAEVMRPC 163 Query: 63 LEL----WLKINSE 72 + L+INS+ Sbjct: 164 KRVCPTGALEINSD 177 >gi|262382202|ref|ZP_06075340.1| F420H2:quinone oxidoreductase [Bacteroides sp. 2_1_33B] gi|262297379|gb|EEY85309.1| F420H2:quinone oxidoreductase [Bacteroides sp. 2_1_33B] Length = 415 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDE--CIDCGVCEPECPV 52 +T+ C CV+ CP C + E FL DE CIDCG+CE CPV Sbjct: 4 ITDKRDCCGCNSCVQRCPKSCIRMREDDEGFLYPEVDESVCIDCGLCEKVCPV 56 >gi|167758102|ref|ZP_02430229.1| hypothetical protein CLOSCI_00440 [Clostridium scindens ATCC 35704] gi|167663999|gb|EDS08129.1| hypothetical protein CLOSCI_00440 [Clostridium scindens ATCC 35704] Length = 503 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+EVCP D I D+CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCIEVCPKDAISMVGGKSYIDQDKCIKCGKCKSVCPYDAISKKERP 175 >gi|167629547|ref|YP_001680046.1| 4fe-4S ferredoxin, pshb protein [Heliobacterium modesticaldum Ice1] gi|119675287|gb|ABL89193.1| PshB [Heliobacterium modesticaldum] gi|167592287|gb|ABZ84035.1| 4fe-4S ferredoxin, pshb protein [Heliobacterium modesticaldum Ice1] Length = 54 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T+ C C C++ C V EG+ + +I D C+DCGVC +CPVDAI P Sbjct: 1 MAYKITDACTACGA--CMDGCCVGAIVEGKKY-SITSD-CVDCGVCADKCPVDAIIP 53 >gi|21226713|ref|NP_632635.1| Iron-sulfur cluster-binding protein [Methanosarcina mazei Go1] gi|20905001|gb|AAM30307.1| Iron-sulfur cluster-binding protein [Methanosarcina mazei Go1] Length = 376 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ T C LCK CV C E L I+P++CI C C CP DA++ Sbjct: 310 FINTSKCALCKA--CVLNCSAHAIEEMNKTLKINPEKCIQCYCCRELCPNDAVE 361 >gi|255525714|ref|ZP_05392646.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] gi|255510616|gb|EET86924.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] Length = 458 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y VT+ C C C+EVCP + I+ + C +CG+C CP AI P Sbjct: 67 YTVTDACRGCIQHKCMEVCPANAITRVAGSAYINQELCKECGMCRKSCPYGAIAEVMRPC 126 Query: 63 LEL----WLKINSE 72 + L+INS+ Sbjct: 127 KRVCPTGALEINSD 140 >gi|260881286|ref|ZP_05404060.2| putative 4Fe-4S binding domain protein [Mitsuokella multacida DSM 20544] gi|260849026|gb|EEX69033.1| putative 4Fe-4S binding domain protein [Mitsuokella multacida DSM 20544] Length = 206 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y V++ C+ C+ C+ VCP C GEN A I C+ CG C CPV AI Sbjct: 150 YQVSKACVGCRR--CLSVCPQACITMGENDCAHIEDSHCLSCGRCAEVCPVQAI 201 >gi|222054720|ref|YP_002537082.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221564009|gb|ACM19981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 55 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + +++ CI C D E CPV+ E + I D CIDCG C CPV AI Sbjct: 1 MAHKISDECINCGACD--ESCPVNAISEEGSKRTISADTCIDCGACVDTCPVSAISA 55 >gi|309792281|ref|ZP_07686753.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6] gi|308225822|gb|EFO79578.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6] Length = 476 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 +CVE CP F E + + C CG C P CP + T+ E E + Sbjct: 366 ECVEACPEHAFERTEEGVLLITQRCTGCGACIPACPYQVVSSITQEHFE------PEALS 419 Query: 76 QWPNITTKKESLPSA 90 W + + + PSA Sbjct: 420 LWKRLLRRFQPQPSA 434 >gi|308049780|ref|YP_003913346.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307631970|gb|ADN76272.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 233 Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGLELW 66 LC H D CVEVCP Y+ +N L +H +E CI C C CP I + W Sbjct: 56 LCNHCDNAACVEVCPTGAMYKADNGLTLHRNEDCIGCQRCVRACPYQVIGMNRSAPHRHW 115 >gi|304412801|ref|ZP_07394403.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307465|ref|ZP_07587200.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|304348881|gb|EFM13297.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910253|gb|EFN40686.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] Length = 553 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C +C CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|160894561|ref|ZP_02075337.1| hypothetical protein CLOL250_02113 [Clostridium sp. L2-50] gi|156863872|gb|EDO57303.1| hypothetical protein CLOL250_02113 [Clostridium sp. L2-50] Length = 483 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGKACQAACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLVRP 152 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 17 CVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDT 59 C++ CPVD +N I+ D+CI CG C +CP AI T Sbjct: 153 CMKSCPVDAISVADNGTGIAVINQDKCIQCGSCVHKCPFGAIGSKT 198 >gi|217971445|ref|YP_002356196.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|217496580|gb|ACK44773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] Length = 553 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C +C CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|126176318|ref|YP_001052467.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999523|gb|ABN63598.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 553 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C +C CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|251799429|ref|YP_003014160.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. JDR-2] gi|247547055|gb|ACT04074.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. JDR-2] Length = 110 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKP 57 M VV+E+ C+ C CV VCP + F G++ + + D+C C +CE CPVDA+ Sbjct: 1 MIEVVSESRCVSCNQ--CVSVCPTNVFDRGDDGIPVIARQDDCQTCFMCELYCPVDALY- 57 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESL 87 P E + I+ E A Q + +E + Sbjct: 58 -VAPDSEQVIGISEEEAEQQGLLGGYREKV 86 >gi|148242469|ref|YP_001227626.1| ferredoxin [Synechococcus sp. RCC307] gi|147850779|emb|CAK28273.1| Ferredoxin [Synechococcus sp. RCC307] Length = 74 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C + G+ F I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVDACPVACIHPGQGANTKGTGFYWIDFQTCIDCGICLQVCPVEGAIVPEERPDLQ 71 >gi|118580644|ref|YP_901894.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503354|gb|ABK99836.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pelobacter propionicus DSM 2379] Length = 56 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + ++CI C D + CPV+ E + I D CIDCG C CPV+AI Sbjct: 1 MAHSINDDCINCGACD--DSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAI 53 >gi|330811333|ref|YP_004355795.1| Electron transport complex protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379441|gb|AEA70791.1| Electron transport complex protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 341 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + I DEC C +C CPVD I+ Sbjct: 73 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTILIDECTGCDLCVAPCPVDCIE 127 >gi|255100494|ref|ZP_05329471.1| putative iron-sulfur protein [Clostridium difficile QCD-63q42] Length = 424 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAI 55 ENC+ C C+ CP+D +G+ ++ I D C+ CGVC C ++I Sbjct: 293 ENCVKCGK--CITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSI 343 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G E ++KI+ + Sbjct: 290 INHENCVKCGKCITACPIDAISKVKEDGKE-YIKIDED 326 >gi|126699072|ref|YP_001087969.1| putative iron-sulfur protein [Clostridium difficile 630] gi|254975022|ref|ZP_05271494.1| putative iron-sulfur protein [Clostridium difficile QCD-66c26] gi|255092411|ref|ZP_05321889.1| putative iron-sulfur protein [Clostridium difficile CIP 107932] gi|255306435|ref|ZP_05350606.1| putative iron-sulfur protein [Clostridium difficile ATCC 43255] gi|255314150|ref|ZP_05355733.1| putative iron-sulfur protein [Clostridium difficile QCD-76w55] gi|255516828|ref|ZP_05384504.1| putative iron-sulfur protein [Clostridium difficile QCD-97b34] gi|255649929|ref|ZP_05396831.1| putative iron-sulfur protein [Clostridium difficile QCD-37x79] gi|260683084|ref|YP_003214369.1| putative iron-sulfur protein [Clostridium difficile CD196] gi|260686682|ref|YP_003217815.1| putative iron-sulfur protein [Clostridium difficile R20291] gi|306520014|ref|ZP_07406361.1| putative iron-sulfur protein [Clostridium difficile QCD-32g58] gi|115250509|emb|CAJ68333.1| putative iron-sulfur protein [Clostridium difficile] gi|260209247|emb|CBA62547.1| putative iron-sulfur protein [Clostridium difficile CD196] gi|260212698|emb|CBE03782.1| putative iron-sulfur protein [Clostridium difficile R20291] Length = 424 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAI 55 ENC+ C C+ CP+D +G+ ++ I D C+ CGVC C ++I Sbjct: 293 ENCVKCGK--CITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSI 343 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G E ++KI+ + Sbjct: 290 INHENCVKCGKCITACPIDAISKVKEDGKE-YIKIDED 326 >gi|126459993|ref|YP_001056271.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249714|gb|ABO08805.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 369 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + C LC CV VCP D E L I P CI CG+C +CP ++ P Sbjct: 255 VLQGCTLCGA--CVNVCPTDALSLREFELRIVPALCIGCGLCAEKCPEGVMRVSESP 309 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C + CP Y ++ + C DCG+C CPV+AI+ + P Sbjct: 87 CIWCG--ICAKACPFSAVKYAERKYVEVDYGLCADCGLCNAVCPVEAIQMPSLP 138 >gi|119717157|ref|YP_924122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119537818|gb|ABL82435.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 505 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 C C CV++CP ++ E+ + +E CI C C CP DAI D E Sbjct: 57 CNHCTDAPCVKICPTQALFKREDGIVDFDNERCIGCKSCMQACPYDAIYIDAE 109 >gi|124023226|ref|YP_001017533.1| ferredoxin 4Fe-4S [Prochlorococcus marinus str. MIT 9303] gi|123963512|gb|ABM78268.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9303] Length = 74 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DC + CPV C +G NF I+ D CIDCG+C CPV+ A+ P+ L+ Sbjct: 14 ADCAQACPVGCIQPGQGKNDKGRNFYLINFDICIDCGICLQVCPVEGAVLPEERRDLQ 71 >gi|160877323|ref|YP_001556639.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|160862845|gb|ABX51379.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|315269528|gb|ADT96381.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 553 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C +C CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L +IN + A + T K+E+ Sbjct: 468 VISLTPQINFDKAARQQQHTLKEEA 492 >gi|153812810|ref|ZP_01965478.1| hypothetical protein RUMOBE_03217 [Ruminococcus obeum ATCC 29174] gi|149831170|gb|EDM86259.1| hypothetical protein RUMOBE_03217 [Ruminococcus obeum ATCC 29174] Length = 501 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+V+ C C C++ CP + I D+CI CG C+ CP DAI + P Sbjct: 115 YIVSNMCRGCVAHPCMQACPKGAISMKDGKSYIDQDKCIKCGKCKAACPYDAISHNIRP 173 >gi|239625212|ref|ZP_04668243.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519442|gb|EEQ59308.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 507 Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 V + N I+ + C C +DC + EN A I D+C+ CG+C CP AI ++ Sbjct: 163 VCSYNAIIIQERPCAAACGMDCIHSDENGKADIDYDKCVSCGMCLVNCPFGAIADKSQ 220 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VVT+ C C CVEVCP D I D CI CG C C +AI P Sbjct: 116 VVTDGCQGCLAHPCVEVCPKDAVSIDRSNGRSHIDQDRCIRCGRCADVCSYNAIIIQERP 175 >gi|9651775|gb|AAF91267.1|AF230199_9 pyruvate oxidoreductase cysteine-rich subunit 2 [Methanococcus maripaludis] Length = 138 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--------- 58 C+ C+ C+ VCP D + + + +HP++C+ C +C CPV AI+ D Sbjct: 34 RCMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAVKC 93 Query: 59 ---TEPGLELWLKINSEYATQW--PNITTKKESLPSAAK 92 E G E+ L++ A + I K+ L S K Sbjct: 94 DGCIERGSEVCLEVCPTKALDYYENTIENKRAELVSKLK 132 >gi|70732171|ref|YP_261927.1| RnfABCDGE type electron transport complex subunit B [Pseudomonas fluorescens Pf-5] gi|68346470|gb|AAY94076.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens Pf-5] Length = 401 Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C++ CPVD + ++ DEC C +C CPVD I Sbjct: 73 IAHIREAECIGC--TKCIQACPVDAIVGAAKLMHSVLIDECTGCDLCVAPCPVDCI 126 >gi|218245586|ref|YP_002370957.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 8801] gi|257058632|ref|YP_003136520.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8802] gi|218166064|gb|ACK64801.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8801] gi|256588798|gb|ACU99684.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8802] Length = 75 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV+ CPV C +EG ++ I + CIDCG+C CPV+ AI Sbjct: 5 IVTETCE--GVADCVDACPVACIHEGPGKNSKGTDWYWIDFNTCIDCGICLNVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P+ P L+ Sbjct: 63 IPEERPDLQ 71 >gi|15668327|ref|NP_247123.1| formate dehydrogenase, iron-sulfur subunit [Methanocaldococcus jannaschii DSM 2661] gi|2833496|sp|Q57619|FER8_METJA RecName: Full=Uncharacterized ferredoxin MJ0155 gi|1498926|gb|AAB98137.1| formate dehydrogenase, iron-sulfur subunit [Methanocaldococcus jannaschii DSM 2661] Length = 151 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C++ C E+CPVD Y + + + CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKDGIPIVDKERCIACGMCAIACPIGAI 88 >gi|226952541|ref|ZP_03823005.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter sp. ATCC 27244] gi|226836723|gb|EEH69106.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter sp. ATCC 27244] Length = 267 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-- 56 M ++ E+ CI C T C+ CPVD G+ +I D C C +C P CPVD I Sbjct: 87 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCIDLI 144 Query: 57 PDTEP 61 PDT+P Sbjct: 145 PDTKP 149 >gi|149926436|ref|ZP_01914697.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149824799|gb|EDM84013.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 200 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCPV+CFY+ + + +H D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCQAVCPVNCFYKTDEGVVLHDKDLCIGCGYCFYACPFGA 101 >gi|308049671|ref|YP_003913237.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307631861|gb|ADN76163.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 205 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y V+ C C + CVEVCPV + + + + P CI C C CP DA + D Sbjct: 63 SYYVSIGCNHCDNPVCVEVCPVGSMHKRRSDGLVHVDPAVCIGCEACAFACPYDAPQFDR 122 Query: 60 EPGL 63 E G+ Sbjct: 123 ERGI 126 >gi|294649835|ref|ZP_06727237.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter haemolyticus ATCC 19194] gi|292824318|gb|EFF83119.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter haemolyticus ATCC 19194] Length = 267 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-- 56 M ++ E+ CI C T C+ CPVD G+ +I D C C +C P CPVD I Sbjct: 87 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCIDLI 144 Query: 57 PDTEP 61 PDT+P Sbjct: 145 PDTKP 149 >gi|254502148|ref|ZP_05114299.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222438219|gb|EEE44898.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 134 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 18 VEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 + VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 1 MAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 38 >gi|260778688|ref|ZP_05887580.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260604852|gb|EEX31147.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 202 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|188585464|ref|YP_001917009.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350151|gb|ACB84421.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 482 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV+TE C C CV CPV ++ I +CI+CG C+ CP +AI P Sbjct: 89 YVITEACRGCLANHCVSYCPVGAIEFVQHKAKIDGQKCIECGKCKDACPYNAIVDVMRP 147 >gi|296272504|ref|YP_003655135.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096678|gb|ADG92628.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 198 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C +VCP DCFY + + +H D CI CG C CP A Sbjct: 59 ISMACMHCADAPCQQVCPTDCFYIRTDGIVLHNKDICIGCGYCLFACPFGA 109 >gi|227871720|ref|ZP_03990129.1| ferredoxin hydrogenase [Oribacterium sinus F0268] gi|227842429|gb|EEJ52650.1| ferredoxin hydrogenase [Oribacterium sinus F0268] Length = 488 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC LC C C + I P +C +CG+C CP AI T P Sbjct: 95 SYSVTDNCRLCLGKACQNSCHFGAITMTDQRAHIDPMKCKECGMCATACPYSAIAQLTRP 154 >gi|323499043|ref|ZP_08104023.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sinaloensis DSM 21326] gi|323315878|gb|EGA68909.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sinaloensis DSM 21326] Length = 202 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|117922345|ref|YP_871537.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117614677|gb|ABK50131.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 553 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + A+H C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|255526810|ref|ZP_05393709.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296186424|ref|ZP_06854827.1| protein HymB [Clostridium carboxidivorans P7] gi|255509489|gb|EET85830.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296048871|gb|EFG88302.1| protein HymB [Clostridium carboxidivorans P7] Length = 631 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C+ CPV+C + + I +CI CG C CPVDAI Sbjct: 575 LKYEITDKCIGC--TKCLRNCPVNCINGKVKQVHTIDQSKCIKCGACCSGCPVDAI 628 >gi|257065418|ref|YP_003145090.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256793071|gb|ACV23741.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 414 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V TE C+ ++ CVE C + L +HP +CI CG C CP AI+ Sbjct: 21 VHTERCVTVRNRHAACLRCVEACTSGAIIYEDGELQVHPKKCIGCGTCATACPTSAIE 78 >gi|212696952|ref|ZP_03305080.1| hypothetical protein ANHYDRO_01515 [Anaerococcus hydrogenalis DSM 7454] gi|212676040|gb|EEB35647.1| hypothetical protein ANHYDRO_01515 [Anaerococcus hydrogenalis DSM 7454] Length = 526 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y++ E CI C C +CPV E N I D+CI CG C CP++AI Sbjct: 470 LSYLIGEKCIGCGK--CKMLCPVGAISGEKRNRHEIDHDKCIKCGQCMENCPIEAI 523 >gi|254461199|ref|ZP_05074615.1| formate dehydrogenase Fe-S subunit [Rhodobacterales bacterium HTCC2083] gi|206677788|gb|EDZ42275.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium HTCC2083] Length = 134 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 18 VEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 + VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 1 MAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGA 38 >gi|18312131|ref|NP_558798.1| ferredoxin like protein [Pyrobaculum aerophilum str. IM2] gi|18159564|gb|AAL62980.1| ferredoxin like protein [Pyrobaculum aerophilum str. IM2] Length = 96 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLEL 65 E C C+ C +CP C+ + +++ + + C++CG C CP +I+ + G+ + Sbjct: 32 EKCRKCEKKPCTYMCPAKCYVQQGDYVVLSTEACVECGTCRVVCPHGSIEWNYPRSGMGI 91 Query: 66 WLKIN 70 W + Sbjct: 92 WYRFT 96 >gi|325845863|ref|ZP_08169061.1| protein HymB [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481769|gb|EGC84801.1| protein HymB [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 526 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y++ E CI C C +CPV E N I D+CI CG C CP++AI Sbjct: 470 LSYLIGEKCIGCGK--CKMLCPVGAISGEKRNRHEIDHDKCIKCGQCMENCPIEAI 523 >gi|223041221|ref|ZP_03611471.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] gi|222877513|gb|EEF12644.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] Length = 213 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C+ C VCPVDCFY + + +H D CI CG C CP A Sbjct: 62 CMHCEDAPCSLVCPVDCFYIRADGVVLHDKDICIGCGYCLYACPFGA 108 >gi|150005462|ref|YP_001300206.1| F420H2:quinone oxidoreductase [Bacteroides vulgatus ATCC 8482] gi|149933886|gb|ABR40584.1| F420H2:quinone oxidoreductase [Bacteroides vulgatus ATCC 8482] Length = 427 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPV 52 +T+ C + CV+ CP C EG + + +CIDCG+CE CP+ Sbjct: 4 ITDKQSCCGCSSCVQKCPRQCISLHEDTEGFLYPVVDKGDCIDCGLCEKVCPL 56 >gi|78212933|ref|YP_381712.1| ferredoxin [Synechococcus sp. CC9605] gi|260436274|ref|ZP_05790244.1| conserved domain protein [Synechococcus sp. WH 8109] gi|78197392|gb|ABB35157.1| ferredoxin [Synechococcus sp. CC9605] gi|260414148|gb|EEX07444.1| conserved domain protein [Synechococcus sp. WH 8109] Length = 74 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G+ +F I+ D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVDACPVACIDQGKGKNKKGTDFYWINFDTCIDCGICLQVCPVEGAIVAEERPDLQ 71 >gi|326424045|ref|NP_761415.2| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus CMCP6] gi|319999422|gb|AAO10942.2| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus CMCP6] Length = 202 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|313903955|ref|ZP_07837335.1| hydrogenase large subunit domain protein [Eubacterium cellulosolvens 6] gi|313471104|gb|EFR66426.1| hydrogenase large subunit domain protein [Eubacterium cellulosolvens 6] Length = 513 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 26/54 (48%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +Y VT+NC C C C D G + I P +C +CG C CP +AI Sbjct: 95 SYSVTDNCRKCMGQACKNACKFDAISIGNHRSHIDPTKCRECGKCAQACPYNAI 148 >gi|302873024|ref|YP_003841657.1| hypothetical protein Clocel_0104 [Clostridium cellulovorans 743B] gi|307688817|ref|ZP_07631263.1| ferredoxin, 4Fe-4S [Clostridium cellulovorans 743B] gi|302575881|gb|ADL49893.1| hypothetical protein Clocel_0104 [Clostridium cellulovorans 743B] Length = 56 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M YV+ ++CI C C CPV +G+ I+ CIDCG C CPV A Sbjct: 1 MAYVINDSCISCGA--CASECPVSAINQGDAQYEINDSSCIDCGNCANVCPVGA 52 >gi|163736984|ref|ZP_02144402.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] gi|161389588|gb|EDQ13939.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] Length = 649 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V ++NC LC CV +CP + + L D C+ CG+C CP DAI EP Sbjct: 496 VSSDNCTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAIT--YEP 551 Query: 62 GLEL 65 L L Sbjct: 552 RLNL 555 Score = 40.0 bits (92), Expect = 0.093, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV TE +LC H T C+++CP + ++I P C CG C CP A Sbjct: 260 YVRTEP-LLCAHSRAGQTGCTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGA 318 Query: 55 IKPDTEPGLELWLKINS 71 I D P L +I + Sbjct: 319 ITYDAPPTDALMRRIQT 335 >gi|153832374|ref|ZP_01985041.1| formate dehydrogenase iron-sulfur subunit [Vibrio harveyi HY01] gi|156974561|ref|YP_001445468.1| hypothetical protein VIBHAR_02279 [Vibrio harveyi ATCC BAA-1116] gi|269963064|ref|ZP_06177400.1| formate dehydrogenase, iron-sulfur subunit [Vibrio harveyi 1DA3] gi|148871403|gb|EDL70266.1| formate dehydrogenase iron-sulfur subunit [Vibrio harveyi HY01] gi|156526155|gb|ABU71241.1| hypothetical protein VIBHAR_02279 [Vibrio harveyi ATCC BAA-1116] gi|269832196|gb|EEZ86319.1| formate dehydrogenase, iron-sulfur subunit [Vibrio harveyi 1DA3] Length = 202 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|157164783|ref|YP_001467446.1| cytoplasmic membrane protein [Campylobacter concisus 13826] gi|112800981|gb|EAT98325.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] Length = 213 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C+ C VCPVDCFY + + +H D CI CG C CP A Sbjct: 62 CMHCEDAPCSLVCPVDCFYIRADGIVLHDKDICIGCGYCLYACPFGA 108 >gi|113972044|ref|YP_735837.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886728|gb|ABI40780.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 553 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 13/87 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKESLP 88 + L +IN + A + + T KE P Sbjct: 468 VISLTPQINFDKAAR-QQLQTLKEEAP 493 >gi|114049274|ref|YP_739824.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113890716|gb|ABI44767.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 553 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 13/87 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV +CP +G + A+H C+ CG+CE CP E Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACP--------EK 467 Query: 62 GLELWLKINSEYATQWPNITTKKESLP 88 + L +IN + A + + T KE P Sbjct: 468 VISLTPQINFDKAAR-QQLQTLKEEAP 493 >gi|293401784|ref|ZP_06645925.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304736|gb|EFE45984.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 208 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + NCI C C+ CP C +G+ + + C+ CG+C CPV AI+ TE Sbjct: 152 YQIQTNCIGC--NKCLSSCPQQCIKQGKPYHIVQ-SHCLHCGLCYELCPVHAIRKITE 206 >gi|94266820|ref|ZP_01290483.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93452521|gb|EAT03113.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 345 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP--VDAIK 56 +T +CI C CV VCP + E I ++CI CG CE CP VDA++ Sbjct: 105 ITADCIKCG--KCVHVCPTEAISEDNR---IAREKCIGCGNCEAICPPKVDAVR 153 >gi|37679883|ref|NP_934492.1| formate dehydrogenase, iron-sulfur subunit [Vibrio vulnificus YJ016] gi|320156342|ref|YP_004188721.1| formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus MO6-24/O] gi|37198628|dbj|BAC94463.1| formate dehydrogenase, iron-sulfur subunit [Vibrio vulnificus YJ016] gi|319931654|gb|ADV86518.1| formate dehydrogenase-O, iron-sulfur subunit / Putative formate dehydrogenase iron-sulfur subunit [Vibrio vulnificus MO6-24/O] Length = 202 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|254508923|ref|ZP_05121031.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 16] gi|219548162|gb|EED25179.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 16] Length = 199 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 50 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 100 >gi|163800919|ref|ZP_02194819.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. AND4] gi|159175268|gb|EDP60065.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. AND4] Length = 202 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|320449774|ref|YP_004201870.1| NrfC protein [Thermus scotoductus SA-01] gi|320149943|gb|ADW21321.1| NrfC protein [Thermus scotoductus SA-01] Length = 195 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA 54 E C+ C+ + CV VCP Y+ E + + P +CI CG C CP DA Sbjct: 56 EQCLHCETSPCVPVCPTGASYQTQEGLVLVDPKKCIACGACIAACPYDA 104 >gi|296158465|ref|ZP_06841296.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. Ch1-1] gi|295891409|gb|EFG71196.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. Ch1-1] Length = 413 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CPVD +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPVDAITHDDNNYVVKADICNGCMACVPPCPTGAI 64 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 15 IDPEICIRCNTCEETCPVDAITHD 38 >gi|295094175|emb|CBK83266.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Coprococcus sp. ART55/1] Length = 56 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+ ++CI C C CPV + I +CI CG C CPV I Sbjct: 1 MAFVIGDSCIGCGS--CAGACPVGAISDNGGVFVIDGSQCISCGACAGSCPVGTIA 54 >gi|255322093|ref|ZP_05363240.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] gi|255300791|gb|EET80061.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] Length = 213 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C+ C VCPVDCFY + + +H D CI CG C CP A Sbjct: 62 CMHCEDAPCSLVCPVDCFYIRADGVVLHDKDICIGCGYCLYACPFGA 108 >gi|160933096|ref|ZP_02080485.1| hypothetical protein CLOLEP_01939 [Clostridium leptum DSM 753] gi|156868170|gb|EDO61542.1| hypothetical protein CLOLEP_01939 [Clostridium leptum DSM 753] Length = 546 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 26/62 (41%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + VT NC C CV CP + I P +C +CG C CP +AI P Sbjct: 160 FTVTANCQRCMAKKCVAACPFGAITVTGSGAYIDPAKCKECGRCAAACPYNAISDTMRPC 219 Query: 63 LE 64 L Sbjct: 220 LR 221 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE--- 72 C+ CPVD EN A I + CI CG C +CP AI DT +E+ ++ + Sbjct: 219 CLRSCPVDAITMDENKQASIKYERCIGCGACTMDCPFGAIS-DTSSIVEVIEQLKGKKQV 277 Query: 73 YATQWPNI-----TTKKESLPSAAKMDGVKQKYE 101 YA P I T L +A K G +E Sbjct: 278 YAMFAPAIEGQFGTATVGMLKAALKKLGFDDSFE 311 >gi|91784376|ref|YP_559582.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] gi|91688330|gb|ABE31530.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] Length = 413 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CPVD +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPVDAITHDDNNYVVKADICNGCMACVPPCPTGAI 64 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 15 IDPEICIRCNTCEETCPVDAITHD 38 >gi|84385483|ref|ZP_00988514.1| formate dehydrogenase, iron-sulfur subunit [Vibrio splendidus 12B01] gi|86145998|ref|ZP_01064325.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. MED222] gi|84379463|gb|EAP96315.1| formate dehydrogenase, iron-sulfur subunit [Vibrio splendidus 12B01] gi|85836203|gb|EAQ54334.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. MED222] Length = 202 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|295111871|emb|CBL28621.1| Uncharacterized conserved protein [Synergistetes bacterium SGP1] Length = 203 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + ENCI C C VCP D G F AI C+ CG C CPV AI+ Sbjct: 151 YHIMENCIGCG--TCQAVCPQDAISSGTPF-AIDESHCLQCGNCAENCPVKAIE 201 >gi|160915963|ref|ZP_02078171.1| hypothetical protein EUBDOL_01988 [Eubacterium dolichum DSM 3991] gi|158432439|gb|EDP10728.1| hypothetical protein EUBDOL_01988 [Eubacterium dolichum DSM 3991] Length = 482 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+NC C CV C D + G I D+C +CG C+ CP +AI Sbjct: 100 VTDNCRKCMAKACVASCKFDAIHIGNERAYIDYDKCKECGACKNACPFNAI 150 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEY 73 C CPVD GEN LA I ++CI+CG C+ +CP AI+ + +E K Y Sbjct: 157 CKLSCPVDAITIGENKLAYIDEEKCINCGACQAKCPFGAIEDISWMVNVIEELNKGTKMY 216 Query: 74 ATQWPNITTKKESLPSAAKMDGVKQ 98 A P I + ++ ++G++Q Sbjct: 217 AIFAPAIQGQFDNATLPQIIEGIRQ 241 >gi|95930133|ref|ZP_01312872.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] gi|95133827|gb|EAT15487.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] Length = 60 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 M+Y ++ E+C C +C VCPVDC +N I+ +ECIDCG C CPVD I Sbjct: 1 MSYRILEEDCTACG--ECEPVCPVDCISAKDNGKRLINEEECIDCGACADACPVDCI 55 >gi|296125226|ref|YP_003632478.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] gi|296017042|gb|ADG70279.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] Length = 55 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ +C+ C C C D EG+ ++ I PD+C DCG CEP CP +AI Sbjct: 1 MPRVINNDCVACGS--CKPECAFDAISEGDIYV-IDPDKCTDCGACEPVCPSNAI 52 >gi|261252991|ref|ZP_05945564.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio orientalis CIP 102891] gi|260936382|gb|EEX92371.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio orientalis CIP 102891] Length = 202 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|91223723|ref|ZP_01258987.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 12G01] gi|254229547|ref|ZP_04922960.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. Ex25] gi|262394264|ref|YP_003286118.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. Ex25] gi|91191215|gb|EAS77480.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 12G01] gi|151937920|gb|EDN56765.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. Ex25] gi|262337858|gb|ACY51653.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. Ex25] Length = 202 Score = 40.8 bits (94), Expect = 0.054, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|225175583|ref|ZP_03729577.1| Electron transfer flavoprotein alpha/beta-subunit [Dethiobacter alkaliphilus AHT 1] gi|225168912|gb|EEG77712.1| Electron transfer flavoprotein alpha/beta-subunit [Dethiobacter alkaliphilus AHT 1] Length = 400 Score = 40.8 bits (94), Expect = 0.054, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 6/89 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPG 62 ++ + CI C+ C++ CP E ++ +A+ D+C CG C CP DAI+ +TE Sbjct: 5 IIVDECIGCEA--CIDACPFPGAVEMKDDVAVLTDKCTGCGACADACPSDAIEVEETEVK 62 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAA 91 +++ +K +Y W I + + + A Sbjct: 63 VDVDIK---DYRGVWVFIEQRDKHIAGVA 88 >gi|328952489|ref|YP_004369823.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452813|gb|AEB08642.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 352 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C +C+ E CP+D EGE + + CI CGVC CP +AI Sbjct: 281 QACGVCRD----ERCPMDAIEEGEGVYQVIDNRCIGCGVCVITCPGEAI 325 >gi|218709475|ref|YP_002417096.1| formate dehydrogenase iron-sulfur subunit [Vibrio splendidus LGP32] gi|218322494|emb|CAV18651.1| Formate dehydrogenase iron-sulfur subunit [Vibrio splendidus LGP32] Length = 202 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|158520577|ref|YP_001528447.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] gi|158509403|gb|ABW66370.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] Length = 589 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ C CVE C EN A+H D+C CG CE CP A++ Sbjct: 514 VTDACVGCG--TCVEFCGFGAI-TIENGKAVHNDQCRGCGRCETRCPNHAVR 562 >gi|28898288|ref|NP_797893.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|153837744|ref|ZP_01990411.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ3810] gi|260361862|ref|ZP_05774871.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|260878625|ref|ZP_05890980.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|260896157|ref|ZP_05904653.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|260899667|ref|ZP_05908062.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|28806505|dbj|BAC59777.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748849|gb|EDM59684.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ3810] gi|308086168|gb|EFO35863.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|308091052|gb|EFO40747.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|308109456|gb|EFO46996.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|308111412|gb|EFO48952.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|328473703|gb|EGF44538.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 10329] Length = 202 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|169830611|ref|YP_001716593.1| hydrogenase large subunit [Candidatus Desulforudis audaxviator MP104C] gi|169637455|gb|ACA58961.1| hydrogenase large subunit domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 485 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C CP +N I D C++CG+C CP AI + P Sbjct: 94 YFVTDACQNCVAHSCRNSCPKKAISVLQNRAYIDNDSCVECGICAKNCPYYAIVEISRP 152 >gi|163731475|ref|ZP_02138922.1| iron-sulfur cluster-binding protein, putative [Roseobacter litoralis Och 149] gi|161394929|gb|EDQ19251.1| iron-sulfur cluster-binding protein, putative [Roseobacter litoralis Och 149] Length = 678 Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C++VCP + +AI P C CG C CP AI D P Sbjct: 307 TKCLDVCPTGAITSAGDHVAIDPLICAGCGACSALCPSGAITYDAPP 353 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP AI Sbjct: 525 VDTDACTLC--LSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAI 576 >gi|148976175|ref|ZP_01812918.1| formate dehydrogenase, iron-sulfur subunit [Vibrionales bacterium SWAT-3] gi|145964570|gb|EDK29824.1| formate dehydrogenase, iron-sulfur subunit [Vibrionales bacterium SWAT-3] Length = 202 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|57505242|ref|ZP_00371171.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Campylobacter upsaliensis RM3195] gi|315639207|ref|ZP_07894369.1| formate dehydrogenase, oxidoreductase [Campylobacter upsaliensis JV21] gi|57016378|gb|EAL53163.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Campylobacter upsaliensis RM3195] gi|315480533|gb|EFU71175.1| formate dehydrogenase, oxidoreductase [Campylobacter upsaliensis JV21] Length = 213 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCAIVCPVDCFYIRGDGVVLHDKEICIGCGYCLYACPFGA 112 >gi|323706136|ref|ZP_08117705.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534580|gb|EGB24362.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] Length = 504 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP I D+CI+CG C+ CP +AI + P Sbjct: 100 YRVTEACRGCITHRCTEVCPKGAITIINKKANIDYDKCIECGRCKDACPYNAISDNLRP 158 >gi|288932883|ref|YP_003436943.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288895131|gb|ADC66668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 196 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 25/55 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +Y C C C+E CP EN + + D CI+CG+C CP I+ Sbjct: 55 SYAFPSKCRHCDPAPCLEACPTSAINREENIVFVEVDRCINCGMCAMVCPFGVIR 109 >gi|163857881|ref|YP_001632179.1| ferredoxin-NADP oxidoreductase [Bordetella petrii DSM 12804] gi|163261609|emb|CAP43911.1| ferredoxin-NADP oxidoreductase [Bordetella petrii] Length = 416 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D N + PD C C C P CP +I Sbjct: 18 EICIRC--NTCEETCPIDAITHDGNNYVVDPDICNGCMACVPPCPTGSI 64 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|313679989|ref|YP_004057728.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Oceanithermus profundus DSM 14977] gi|313152704|gb|ADR36555.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oceanithermus profundus DSM 14977] Length = 257 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CVE CP Y + + D CI C C CP DAI D E G+ Sbjct: 75 DSCMHCSSAACVEACPTGAVGYREGGVVTVDQDWCIGCRNCVQACPYDAIHYDEEKGV 132 >gi|154483804|ref|ZP_02026252.1| hypothetical protein EUBVEN_01508 [Eubacterium ventriosum ATCC 27560] gi|149735295|gb|EDM51181.1| hypothetical protein EUBVEN_01508 [Eubacterium ventriosum ATCC 27560] Length = 56 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV + I D CI+CG C CP D+I D Sbjct: 1 MAYKITDGCIGCGA--CEGTCPVGAISNDGSVCVIDADTCIECGACAGACPTDSITLD 56 >gi|172040506|ref|YP_001800220.1| dimethyl sulfoxide reductase chain B [Corynebacterium urealyticum DSM 7109] gi|171851810|emb|CAQ04786.1| dimethyl sulfoxide reductase chain B [Corynebacterium urealyticum DSM 7109] Length = 213 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 TY + +C C+ C +VCP ++GE+ + + PD+CI C CE CP A Sbjct: 67 FTYYTSISCNHCEDPICAKVCPTTAMHKGEDGIVTVDPDKCIGCRYCEWACPYSA 121 >gi|153950968|ref|YP_001398811.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. doylei 269.97] gi|152938414|gb|ABS43155.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 213 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|269968574|ref|ZP_06182576.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 40B] gi|269826785|gb|EEZ81117.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 40B] Length = 199 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 50 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 100 >gi|283953866|ref|ZP_06371396.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 414] gi|283794645|gb|EFC33384.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 414] Length = 213 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|160940737|ref|ZP_02088079.1| hypothetical protein CLOBOL_05631 [Clostridium bolteae ATCC BAA-613] gi|158436257|gb|EDP14024.1| hypothetical protein CLOBOL_05631 [Clostridium bolteae ATCC BAA-613] Length = 505 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y+VT+NC C C C G I P +C +CG C CP +AI P Sbjct: 115 SYIVTDNCRKCMGKACQNSCNFGAISMGRERAYIEPGKCKECGKCSQACPYNAIAHLERP 174 >gi|149191930|ref|ZP_01870162.1| formate dehydrogenase, iron-sulfur subunit [Vibrio shilonii AK1] gi|148834235|gb|EDL51240.1| formate dehydrogenase, iron-sulfur subunit [Vibrio shilonii AK1] Length = 202 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|307323188|ref|ZP_07602398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306890677|gb|EFN21653.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 341 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++ C C H C++VCP + E + + D C CG C P CP I E G Sbjct: 148 MASDVCKHCTHAACLDVCPTGALFRTEFGTVVVQDDICNGCGYCVPACPYGVIDVRPEDG 207 >gi|323526712|ref|YP_004228865.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1001] gi|323383714|gb|ADX55805.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1001] Length = 414 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDDNNYVVRADVCNGCMACVPPCPTGAI 64 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|255502232|gb|ACU11597.1| HfsD [Thermoanaerobacterium saccharolyticum] Length = 495 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP I D+CI+CG C+ CP +AI + P Sbjct: 91 YRVTEACRGCITHRCTEVCPKGAITIINKKANIDYDKCIECGRCKDACPYNAISDNLRP 149 >gi|172039435|ref|YP_001805936.1| ferredoxin [Cyanothece sp. ATCC 51142] gi|171700889|gb|ACB53870.1| ferredoxin [Cyanothece sp. ATCC 51142] Length = 75 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV+ CPV C +EG ++ I CIDCG+C CPV+ AI Sbjct: 5 IVTETCE--GVADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P+ P L+ Sbjct: 63 VPEERPDLQ 71 >gi|118445132|ref|YP_879222.1| ferredoxin [Clostridium novyi NT] gi|253680812|ref|ZP_04861615.1| ferredoxin [Clostridium botulinum D str. 1873] gi|331270643|ref|YP_004397135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Clostridium botulinum BKT015925] gi|118135588|gb|ABK62632.1| ferredoxin [Clostridium novyi NT] gi|253562661|gb|EES92107.1| ferredoxin [Clostridium botulinum D str. 1873] gi|329127193|gb|AEB77138.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium botulinum BKT015925] Length = 57 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + ++C+ C C CPV +G++ I + CIDCG C CPV AI + Sbjct: 1 MAFKIGDSCVSCGS--CASECPVGAISQGDSQFEIDANSCIDCGNCANVCPVGAIAAE 56 >gi|225619304|ref|YP_002720530.1| hypothetical protein BHWA1_00357 [Brachyspira hyodysenteriae WA1] gi|225214123|gb|ACN82857.1| hypothetical protein BHWA1_00357 [Brachyspira hyodysenteriae WA1] Length = 55 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M V+ +C+ C C+ C D EG N I PD+C DC CE CP +AI P Sbjct: 1 MPRVINNDCVACGS--CLPECAFDAISEG-NIYVIDPDKCTDCAACEAVCPSNAINP 54 >gi|84488976|ref|YP_447208.1| ferredoxin [Methanosphaera stadtmanae DSM 3091] gi|84372295|gb|ABC56565.1| ferredoxin [Methanosphaera stadtmanae DSM 3091] Length = 59 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + +NC+ C CV CP+D EG ++ I ++C+ CGVC CP AI+ Sbjct: 6 YKINDNCVACGL--CVNACPIDAIAEGNPYV-IDEEKCVGCGVCAEACPTQAIE 56 >gi|295677023|ref|YP_003605547.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1002] gi|295436866|gb|ADG16036.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1002] Length = 412 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAI 64 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|189424812|ref|YP_001951989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189421071|gb|ACD95469.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 55 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + +T++C C C + CPV+ E + I D CIDCG C CPV+AI Sbjct: 1 MAHTITDDCTNCAA--CEDSCPVNAISEQGSKRVIDADTCIDCGACVDTCPVNAIHA 55 >gi|157963951|ref|YP_001503985.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848951|gb|ABV89450.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 559 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V TENC LC CV CP +G + A+H +C+ CG+CE CP E Sbjct: 424 VNTENCTLC--MSCVATCPTMALTDGGDRPALHFVEQDCVQCGLCETACP--------EK 473 Query: 62 GLELWLKINSEYATQWPNITTKKES 86 + L ++N + A + T +E+ Sbjct: 474 VISLTPQVNFDKAARQERQTLHEEA 498 >gi|14250934|emb|CAC39230.1| HymB protein [Eubacterium acidaminophilum] Length = 597 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C VCPV + + I D+CI CG C CPV+AI Sbjct: 541 LEYFITDKCIGC--TKCARVCPVTAISGKVKEKHVIDTDKCIKCGACMDACPVNAI 594 >gi|57238533|ref|YP_179664.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni RM1221] gi|57167337|gb|AAW36116.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni RM1221] gi|315058963|gb|ADT73292.1| Formate dehydrogenase-O, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni S3] Length = 213 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|86149326|ref|ZP_01067557.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152455|ref|ZP_01070660.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596633|ref|ZP_01099870.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613584|ref|YP_001001157.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|148925675|ref|ZP_01809363.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157415732|ref|YP_001482988.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167006050|ref|ZP_02271808.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|205356647|ref|ZP_03223409.1| putative formate dehydrogenase iron sulfur subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|218563110|ref|YP_002344889.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956886|ref|ZP_06374359.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 1336] gi|85840108|gb|EAQ57366.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843340|gb|EAQ60550.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249822|gb|EAQ72781.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88191474|gb|EAQ95446.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112360816|emb|CAL35616.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845685|gb|EDK22776.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157386696|gb|ABV53011.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81116] gi|205345504|gb|EDZ32145.1| putative formate dehydrogenase iron sulfur subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|283791612|gb|EFC30408.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 1336] gi|284926716|gb|ADC29068.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni IA3902] gi|307748373|gb|ADN91643.1| Formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni M1] gi|315927458|gb|EFV06796.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930114|gb|EFV09241.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 305] Length = 213 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|317497525|ref|ZP_07955844.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895208|gb|EFV17371.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 495 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V E C C C+EVCP + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGEQCQGCMAHPCMEVCPKKAISFKDGYSYIDQEKCIKCGQCKKVCPYGAIYERKRP 171 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 19/76 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C +VCP YE + A I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CKKVCPYGAIYERKRPCANACGVGAIETDYAGRAKINPDKCVSCG 200 Query: 45 VCEPECPVDAIKPDTE 60 +C CP AI ++ Sbjct: 201 MCMVNCPFGAIADKSQ 216 >gi|157830634|pdb|1CLF|A Chain A, Clostridium Pasteurianum Ferredoxin Length = 55 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + ++C+ C C CPV+ +G++ I D CIDCG C CPV A Sbjct: 1 AYKIADSCVSCGA--CASECPVNAISQGDSIFVIDADTCIDCGNCANVCPVGA 51 >gi|269468926|gb|EEZ80510.1| electron transport complex protein RnfB [uncultured SUP05 cluster bacterium] Length = 147 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-D 58 + +V + CI C T C++ CPVD F + + DEC C +C P CPVD I + Sbjct: 72 VVFVDEQICIGC--TLCIQACPVDAFVGASKVMTTVIADECTGCDLCIPVCPVDCIHVLE 129 Query: 59 TEPGLELWLKINSEYA 74 +P L ++ SE A Sbjct: 130 VQPTLNTYVPDLSEVA 145 >gi|257066615|ref|YP_003152871.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798495|gb|ACV29150.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaerococcus prevotii DSM 20548] Length = 57 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI Sbjct: 1 MAYRIDENTCISCGS--CEGECPVGAISQGDAAYEIDADACIDCGSCAAVCPVEAI 54 >gi|227499762|ref|ZP_03929862.1| ferredoxin [Anaerococcus tetradius ATCC 35098] gi|227218148|gb|EEI83414.1| ferredoxin [Anaerococcus tetradius ATCC 35098] Length = 57 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI Sbjct: 1 MAYRIDENTCISCGS--CEGECPVGAIAQGDAAYEIDADACIDCGSCAAVCPVEAI 54 >gi|126664787|ref|ZP_01735771.1| iron-sulfur cluster-binding protein [Marinobacter sp. ELB17] gi|126631113|gb|EBA01727.1| iron-sulfur cluster-binding protein [Marinobacter sp. ELB17] Length = 659 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LC H T C++VCP + + + + I+ D C CG C CP A+ + P Sbjct: 280 LCAHSRANQPGCTRCLDVCPTEAIFSAGDHVEINSDICAGCGSCAAVCPTSAVTMNETP 338 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 18/59 (30%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 ++ C LC CV +CP L HPD C+ CGVCE CP AI Sbjct: 512 SDKCTLC--LACVSLCPTGA-------LGDHPDRPEVQFTENACVQCGVCESTCPETAI 561 >gi|86605090|ref|YP_473853.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab] gi|86553632|gb|ABC98590.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab] Length = 75 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCVE CPV C + G+ ++ I CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVEACPVACIHPGDGKNAKGTDYFWIDFATCIDCGICLQVCPVEGAILPEEKPHLQ 71 >gi|86151949|ref|ZP_01070162.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124937|ref|YP_004066941.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841057|gb|EAQ58306.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018659|gb|ADT66752.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 213 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 112 >gi|257469186|ref|ZP_05633280.1| hydrogenase, Fe-only [Fusobacterium ulcerans ATCC 49185] gi|317063434|ref|ZP_07927919.1| hydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313689110|gb|EFS25945.1| hydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 644 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + + + C CG C CPV AI Sbjct: 215 LKFRITEKCIGC--TACARVCPVKCISGKIKERHILDTSRCTHCGQCVAACPVGAI 268 >gi|295106095|emb|CBL03638.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Gordonibacter pamelaeae 7-10-1-b] Length = 382 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C + CP D +N LA+ + C+ CG C CP +A+ P Sbjct: 39 CTDACPTDAVGAKDNVLALDNERCVACGACTTVCPTEALIP 79 >gi|22299637|ref|NP_682884.1| ferredoxin-like protein [Thermosynechococcus elongatus BP-1] gi|22295821|dbj|BAC09646.1| ferredoxin-like protein [Thermosynechococcus elongatus BP-1] Length = 75 Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCVE CPV C + +G ++ I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVEACPVACIHPGPGKNAKGTDWFWIDFATCIDCGICLQVCPVEGAIVPEERPDLQ 71 >gi|291279714|ref|YP_003496549.1| formate dehydrogenase subunit beta [Deferribacter desulfuricans SSM1] gi|290754416|dbj|BAI80793.1| formate dehydrogenase, beta subunit [Deferribacter desulfuricans SSM1] Length = 195 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCPVD Y+ E+ + ++ D CI CG C CP A Sbjct: 51 ISVACMHCSDAPCIAVCPVDALYQREDGIVLVNKDVCIGCGYCFFACPFGA 101 >gi|331006635|ref|ZP_08329919.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC1989] gi|330419550|gb|EGG93932.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC1989] Length = 216 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP-D 58 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 114 VAYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVDECTGCDLCVEPCPVDCIDMLP 171 Query: 59 TEPGLELWL-----KINSEYATQWPNITTKKESLPSA 90 E L+ W K+++ AT + +K +S PS+ Sbjct: 172 VEQTLQEWKWTAPNKMSNLIATDRAPLISKSDSAPSS 208 >gi|261378107|ref|ZP_05982680.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria cinerea ATCC 14685] gi|269145561|gb|EEZ71979.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria cinerea ATCC 14685] Length = 279 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 71 LAWIDESACIGC--TACIRACPTDAIMGASKFMHTVIADECTGCGLCIAPCPVDCI 124 >gi|114561242|ref|YP_748755.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332535|gb|ABI69917.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 559 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 M + +E C LC CV CP +G + A+ +C+ CG+CE CP + I Sbjct: 421 MVSINSEKCTLC--LSCVATCPTQALKDGGDAPALKFVEQDCVQCGLCEAACPENVI 475 >gi|303236983|ref|ZP_07323558.1| ferredoxin [Prevotella disiens FB035-09AN] gi|302482848|gb|EFL45868.1| ferredoxin [Prevotella disiens FB035-09AN] Length = 55 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++ +CI C C++ CPV EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVISNDCIACGT--CIDECPVGAISEGDIY-NIDADACTECGTCASVCPSEAIS 53 >gi|296108767|ref|YP_003615716.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295433581|gb|ADG12752.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 150 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C+E+CPVD Y E ++ ++CI C +C CP+ AI Sbjct: 42 CMQCEKAPCMEICPVDAIYLEEGIPIVNKEKCIGCAMCVIACPIGAI 88 >gi|296110006|ref|YP_003616955.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434820|gb|ADG13991.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 166 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C EVCPV+ Y ++++ + ++CI CG+C CP AI Sbjct: 44 CQHCRSAPCKEVCPVEAIYFKDSYVYLDLEKCIGCGLCALACPFGAI 90 >gi|224368236|ref|YP_002602399.1| IorA1 [Desulfobacterium autotrophicum HRM2] gi|223690952|gb|ACN14235.1| IorA1 [Desulfobacterium autotrophicum HRM2] Length = 616 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + VT+ C H DC++ F+ E + I P+ C+ C +C CP +AI P Sbjct: 561 FTVTDRCK--NHRDCMDSIACPSFFIEEGRVKIDPNTCVGCALCAQICPENAIVP 613 >gi|158634532|gb|ABW76118.1| Fe-hydrogenase 3 [Trimastix pyriformis] Length = 445 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C+ CP + I PD C+ CG C+ CP AI Sbjct: 116 YFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGACQKVCPYHAI 168 >gi|167766696|ref|ZP_02438749.1| hypothetical protein CLOSS21_01202 [Clostridium sp. SS2/1] gi|167711633|gb|EDS22212.1| hypothetical protein CLOSS21_01202 [Clostridium sp. SS2/1] gi|291558362|emb|CBL37162.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 495 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V E C C C+EVCP + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGEQCQGCMAHPCMEVCPKKAISFKDGYSYIDQEKCIKCGQCKKVCPYGAIYERKRP 171 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 19/76 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C +VCP YE + A I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CKKVCPYGAIYERKRPCANACGVGAIETDYAGRAKINPDKCVSCG 200 Query: 45 VCEPECPVDAIKPDTE 60 +C CP AI ++ Sbjct: 201 MCMVNCPFGAIADKSQ 216 >gi|298244772|ref|ZP_06968578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297552253|gb|EFH86118.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 263 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C H C+E CP E + + PD C CG C P CP + + G Sbjct: 74 MLSDVCKHCTHAGCMEACPTGAIVRNEFGDVYVQPDICNGCGYCVPSCPFGVVDRNETTG 133 Query: 63 L 63 L Sbjct: 134 L 134 >gi|160893574|ref|ZP_02074358.1| hypothetical protein CLOL250_01128 [Clostridium sp. L2-50] gi|163814830|ref|ZP_02206218.1| hypothetical protein COPEUT_00980 [Coprococcus eutactus ATCC 27759] gi|156864559|gb|EDO57990.1| hypothetical protein CLOL250_01128 [Clostridium sp. L2-50] gi|158449769|gb|EDP26764.1| hypothetical protein COPEUT_00980 [Coprococcus eutactus ATCC 27759] Length = 56 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+ ++CI C C CPV + I +CI CG C CPV I Sbjct: 1 MAFVIGDSCIGCGS--CAGSCPVGAISDNGGVFVIDGSQCISCGACAGSCPVGTIS 54 >gi|251780311|ref|ZP_04823231.1| iron-dependent hydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084626|gb|EES50516.1| iron-dependent hydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 494 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C VC + I PD+C +CG+C+ CP DAI D P Sbjct: 104 FEVTDACRNCIAHKCQSVCNFGAITYVDGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 >gi|253581620|ref|ZP_04858845.1| hydrogenase [Fusobacterium varium ATCC 27725] gi|251836690|gb|EES65225.1| hydrogenase [Fusobacterium varium ATCC 27725] Length = 644 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C + + + C CG C CPV AI Sbjct: 215 LKFRITEKCIGC--TACARVCPVKCISGKIKERHILDTSRCTHCGQCVAACPVGAI 268 >gi|209516646|ref|ZP_03265499.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. H160] gi|209502921|gb|EEA02924.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. H160] Length = 412 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAI 64 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|218961482|ref|YP_001741257.1| putative [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha (hymC-like) [Candidatus Cloacamonas acidaminovorans] gi|167730139|emb|CAO81051.1| putative [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha (hymC-like) [Candidatus Cloacamonas acidaminovorans] Length = 435 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ +NC C T CV VCP + ++ I P C+DCG C C AI P ++P L Sbjct: 12 ILADNCTGC--TACVRVCPTEAIRVRDHKANIDPYRCVDCGNCVNVCRFHAIIPLSDP-L 68 Query: 64 ELWLKINSEYA 74 E+ K + A Sbjct: 69 EIIHKFKYKLA 79 >gi|83950402|ref|ZP_00959135.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius nubinhibens ISM] gi|83838301|gb|EAP77597.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius nubinhibens ISM] Length = 134 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 18 VEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 + VCPVDCFY+ E + +H D CI CG C CP A Sbjct: 1 MAVCPVDCFYQTEEGVVLHSKDLCIGCGYCFYACPFGA 38 >gi|315931016|gb|EFV09991.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 327] Length = 200 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C+ C C VCPVDCFY + + +H E CI CG C CP A Sbjct: 52 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGA 99 >gi|294340543|emb|CAZ88928.1| Putative Electron transport complex, RnfABCDGE type, B subunit (RnfB) [Thiomonas sp. 3As] Length = 210 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 21/103 (20%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPD--TEPGLEL 65 CI C T C++ CPVD + + D C C +C P CPVD I+ + T+P L Sbjct: 88 CIGC--TLCIQACPVDAIAGVSKRMHTVIEDWCTGCALCLPPCPVDCIRMEALTDPALAT 145 Query: 66 WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 N+ W S A+ D +Q+Y ++ +P Sbjct: 146 RSGWNA-----W-----------SPAQADEARQRYARHLERHP 172 >gi|169831040|ref|YP_001717022.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637884|gb|ACA59390.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 995 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C CV VCP + N I P +C CG+C ECP AI Sbjct: 919 VTPEKCAAC--LGCVRVCPFNVPVIAGNISWIEPVQCQGCGICVAECPNAAI 968 >gi|332973049|gb|EGK10986.1| iron-sulfur cluster-binding protein [Kingella kingae ATCC 23330] Length = 285 Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CPVD + + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPVDAIMGASKLMHTVLADECTGCGLCVAPCPVDCI 124 >gi|255322980|ref|ZP_05364116.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] gi|255299842|gb|EET79123.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] Length = 186 Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPVDCFY + + +H ++CI CG C CP A Sbjct: 54 IACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGA 102 >gi|194474799|gb|ACF74512.1| arsenate respiratory reductase iron sulfur subunit [Halarsenatibacter silvermanii] Length = 229 Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 9 CILCKHTDCVEVCPVD---CFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CVE CPVD F + E N + + D CI C CE ECP I + E Sbjct: 58 CNHCDNAPCVEACPVDPKAIFKDSESNLVLMDADRCIGCRNCENECPYGVISYNAEEAHP 117 Query: 65 LW 66 W Sbjct: 118 FW 119 >gi|225374841|ref|ZP_03752062.1| hypothetical protein ROSEINA2194_00464 [Roseburia inulinivorans DSM 16841] gi|225213302|gb|EEG95656.1| hypothetical protein ROSEINA2194_00464 [Roseburia inulinivorans DSM 16841] Length = 468 Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEPGRLRSHIDPQKCKECGKCAQACPYNAIAHLKRP 151 >gi|307266193|ref|ZP_07547736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918797|gb|EFN49028.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 126 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 29/65 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y+ CI CK+ C+ VCP + I ++C+ CG+C CP IK + Sbjct: 44 YLEVVTCIQCKNAVCIRVCPSKAIKRQNGIVKIDKEKCVGCGICAQYCPQSVIKVISGKA 103 Query: 63 LELWL 67 + L Sbjct: 104 FKCEL 108 >gi|269119251|ref|YP_003307428.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] gi|268613129|gb|ACZ07497.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] Length = 614 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 + YV+ + CI C T C VCPV C EG+ I D+CI CG C +C AI Sbjct: 558 LKYVINDKCIGC--TACARVCPVSCI-EGKVKEKHVIEQDKCIKCGACYDKCKFSAI 611 >gi|149201541|ref|ZP_01878515.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|149144589|gb|EDM32618.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 651 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V TE+C LC CV +CP + E+ L D C+ CG+C CP AI EP Sbjct: 498 VNTESCTLC--LSCVSLCPSGALMDNEDKPQLRFQEDACLQCGICATICPEKAIT--LEP 553 Query: 62 GLEL 65 + L Sbjct: 554 RMNL 557 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+++CP + ++I P C CG C CP AI D P Sbjct: 280 SKCLDICPTGAISPDGDHVSIDPMICAGCGACAARCPSGAITYDAPP 326 >gi|188587767|ref|YP_001919801.1| iron-dependent hydrogenase [Clostridium botulinum E3 str. Alaska E43] gi|188498048|gb|ACD51184.1| iron-dependent hydrogenase [Clostridium botulinum E3 str. Alaska E43] Length = 494 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C VC + I PD+C +CG+C+ CP DAI D P Sbjct: 104 FEVTDACRNCIAHKCQSVCNFGAITYVDGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 >gi|134299648|ref|YP_001113144.1| hydrogenase large subunit [Desulfotomaculum reducens MI-1] gi|134052348|gb|ABO50319.1| hydrogenase large subunit domain protein [Desulfotomaculum reducens MI-1] Length = 462 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+ C C C CP +N I + C++CG C CP +AI T P Sbjct: 93 YVVTDACQNCVAHPCRNSCPKKAISVIQNRAFIDQNSCVECGKCANACPYNAIIEVTRP 151 >gi|127510991|ref|YP_001092188.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636286|gb|ABO21929.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 558 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAI 55 V T+NC LC CV CP +G A++ E C+ CG+CE CP I Sbjct: 423 VNTDNCTLC--LSCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVI 474 >gi|325958243|ref|YP_004289709.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329675|gb|ADZ08737.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 143 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 C+ VCP D E + + I D CI CG+C CP+ AI D E G+ + + T Sbjct: 46 CMTVCPEDAIVEIDGAIVIMEDSCIGCGLCRDSCPIGAIHMD-EYGIAKKCNLCIDKETP 104 Query: 77 WPNITTKKESLPSAAKMDGVKQKYEKY 103 +T K++L ++ D + QK +K Sbjct: 105 ACVLTCPKDALKVDSE-DILAQKRDKI 130 >gi|262066053|ref|ZP_06025665.1| putative 4Fe-4S binding domain protein [Fusobacterium periodonticum ATCC 33693] gi|291380303|gb|EFE87821.1| putative 4Fe-4S binding domain protein [Fusobacterium periodonticum ATCC 33693] Length = 206 Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C CVEVCP +C I + C+ CG C CPV A++ Sbjct: 153 YFITDKCIGCNK--CVEVCPQNCIITDSVPYVIEQNHCLHCGNCFTVCPVGAVE 204 >gi|284988958|ref|YP_003407512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062203|gb|ADB73141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 355 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C C H C++VCP + E + + D C CG C P CP I+ Sbjct: 177 CKHCTHAGCLDVCPTGALFRTEFGTVVVQGDICNGCGYCVPSCPYGVIE 225 >gi|154483117|ref|ZP_02025565.1| hypothetical protein EUBVEN_00818 [Eubacterium ventriosum ATCC 27560] gi|149735925|gb|EDM51811.1| hypothetical protein EUBVEN_00818 [Eubacterium ventriosum ATCC 27560] Length = 504 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 26/57 (45%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +T C C C+EVCP D + I D+CI CG C CP +A+ P Sbjct: 115 ITNACQGCLEHPCIEVCPKDAIKMVKGRSVIDQDKCIKCGKCASACPYNAVVKQERP 171 >gi|227499381|ref|ZP_03929492.1| NADH dehydrogenase (ubiquinone) [Anaerococcus tetradius ATCC 35098] gi|227218585|gb|EEI83825.1| NADH dehydrogenase (ubiquinone) [Anaerococcus tetradius ATCC 35098] Length = 526 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y + E CI C C +CP E N I+ D+CI CG C+ CP+DAI Sbjct: 470 LNYDIGEACIGCGK--CKRLCPAQAISGEVRNKHEINQDKCIKCGQCKENCPIDAI 523 >gi|223040716|ref|ZP_03610984.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] gi|222878000|gb|EEF13113.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] Length = 186 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPVDCFY + + +H ++CI CG C CP A Sbjct: 54 IACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGA 102 >gi|15893595|ref|NP_346944.1| ferredoxin [Clostridium acetobutylicum ATCC 824] gi|15023146|gb|AAK78284.1|AE007545_1 Ferredoxin [Clostridium acetobutylicum ATCC 824] gi|325507715|gb|ADZ19351.1| Ferredoxin [Clostridium acetobutylicum EA 2018] Length = 56 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ C+ C C CPV +G+ I D CI+CG C CPV A Sbjct: 1 MAYKITDACVSCGS--CASECPVSAISQGDTQFVIDADTCIECGNCANVCPVGA 52 >gi|227828791|ref|YP_002830571.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|238620983|ref|YP_002915809.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|227460587|gb|ACP39273.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|238382053|gb|ACR43141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] Length = 398 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 46 TALSIACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|157165264|ref|YP_001466214.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] gi|112801511|gb|EAT98855.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] Length = 186 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPVDCFY + + +H ++CI CG C CP A Sbjct: 54 IACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGA 102 >gi|317969911|ref|ZP_07971301.1| iron-sulfur cluster-binding protein [Synechococcus sp. CB0205] Length = 74 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 DCV+ CPV C +G F I D CIDCG+C CPV AI P+ +P L+ Sbjct: 14 ADCVDACPVACINPGTGANAKGTEFYWIDFDTCIDCGICLQVCPVAGAIVPEEKPELQ 71 >gi|302393028|ref|YP_003828848.1| NADH dehydrogenase (quinone) [Acetohalobium arabaticum DSM 5501] gi|302205105|gb|ADL13783.1| NADH dehydrogenase (quinone) [Acetohalobium arabaticum DSM 5501] Length = 598 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T++C C T CV+ CP D E + I DECI CG C CP DAI Sbjct: 542 LDYKITDDCEGC--TKCVDECPADAISGEAKEQHTIDVDECIKCGACVDVCPFDAI 595 >gi|293376326|ref|ZP_06622563.1| ferredoxin [Turicibacter sanguinis PC909] gi|292645015|gb|EFF63088.1| ferredoxin [Turicibacter sanguinis PC909] Length = 55 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + CI C C CPV+C EG+ + +I D CIDCG CE CP ++I Sbjct: 1 MPRKILDTCIACGS--CAAECPVECISEGDIY-SIDADVCIDCGACEAVCPTESI 52 >gi|167757175|ref|ZP_02429302.1| hypothetical protein CLORAM_02725 [Clostridium ramosum DSM 1402] gi|167703350|gb|EDS17929.1| hypothetical protein CLORAM_02725 [Clostridium ramosum DSM 1402] Length = 202 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+++ CI C C CP C G + I D C+ CG+C CPV AI Sbjct: 149 YLISNRCIACDR--CKRECPQQCIKSGSKY-KIMQDHCLHCGLCYENCPVRAI 198 >gi|147676934|ref|YP_001211149.1| ferredoxin-like protein [Pelotomaculum thermopropionicum SI] gi|146273031|dbj|BAF58780.1| ferredoxin-like protein [Pelotomaculum thermopropionicum SI] Length = 91 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TE C C H C+ CP C+ EN +A H + C++CG C C A+K Sbjct: 25 TEKCRACLHRACLAACPARCYLPHPENGVAFHYEHCLECGTCFLICDHGALK 76 >gi|71279765|ref|YP_268923.1| electron transport complex protein RnfB [Colwellia psychrerythraea 34H] gi|71145505|gb|AAZ25978.1| electron transport complex, RnfABCDGE type, B subunit [Colwellia psychrerythraea 34H] Length = 189 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK--- 56 + +V+ E+CI C T C++ CPVD + I DEC C +C CPVD I+ Sbjct: 111 VAFVIEEDCIGC--TKCIQACPVDAIIGAAKQMHTIIIDECTGCDLCVAPCPVDCIEMRE 168 Query: 57 -PDT 59 PDT Sbjct: 169 LPDT 172 >gi|257460010|ref|ZP_05625114.1| formate dehydrogenase iron-sulfur subunit [Campylobacter gracilis RM3268] gi|257442451|gb|EEV17590.1| formate dehydrogenase iron-sulfur subunit [Campylobacter gracilis RM3268] Length = 185 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPV CFY + + +H D+CI CG C CP A Sbjct: 55 IACQHCTDAPCAQVCPVQCFYIRTDGVVLHDKDKCIGCGYCLYACPFGA 103 >gi|90413855|ref|ZP_01221842.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum 3TCK] gi|90325166|gb|EAS41669.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum 3TCK] Length = 205 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPADCFEQTEDGIVRHDKDLCIGCGYCLFACPFGA 103 >gi|296109053|ref|YP_003616002.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295433867|gb|ADG13038.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 62 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Query: 12 CKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CK DC E CP++ F EG+ + +PDEC CGVCE CP A+K + E Sbjct: 10 CKGPDCAECVNNCPMEVFEIEGDKVVVANPDECTYCGVCEDVCPTSAVKVEPE 62 >gi|257065141|ref|YP_003144813.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] gi|256792794|gb|ACV23464.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] Length = 209 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 TY V+ C C CVE CPV + E+ ++ P+ CI CG C CP A + D Sbjct: 59 FTYYVSSACNHCATPACVEACPVGTMTKHEDTGLVYNDPETCIGCGSCVNACPYGAPQVD 118 Query: 59 TE 60 TE Sbjct: 119 TE 120 >gi|227831524|ref|YP_002833304.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|229580472|ref|YP_002838872.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|284999076|ref|YP_003420844.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457972|gb|ACP36659.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|228011188|gb|ACP46950.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|284446972|gb|ADB88474.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|323475826|gb|ADX86432.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] gi|323478601|gb|ADX83839.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 398 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 46 TALSIACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|170696011|ref|ZP_02887149.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia graminis C4D1M] gi|170139091|gb|EDT07281.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia graminis C4D1M] Length = 413 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAI 64 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|282859228|ref|ZP_06268350.1| ferredoxin [Prevotella bivia JCVIHMP010] gi|282588047|gb|EFB93230.1| ferredoxin [Prevotella bivia JCVIHMP010] Length = 55 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CPV+ EG+ + +I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPVEAISEGDIY-SIDADACTECGTCASVCPNEAIS 53 >gi|229585998|ref|YP_002844500.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|228021048|gb|ACP56455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] Length = 398 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 46 TALSIACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|54309047|ref|YP_130067.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum SS9] gi|46913479|emb|CAG20265.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum SS9] Length = 205 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMAVCPADCFEQTEDGIVRHDKDLCIGCGYCLFACPFGA 103 >gi|291283740|ref|YP_003500558.1| putative polyferredoxin [Escherichia coli O55:H7 str. CB9615] gi|290763613|gb|ADD57574.1| Putative polyferredoxin [Escherichia coli O55:H7 str. CB9615] gi|320657197|gb|EFX25006.1| putative polyferredoxin [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662803|gb|EFX30135.1| putative polyferredoxin [Escherichia coli O55:H7 str. USDA 5905] Length = 284 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CI+C VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIRGVNSP 69 >gi|163740593|ref|ZP_02147987.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386451|gb|EDQ10826.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] Length = 629 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV TE +LC H T C+++CP + ++I P C CG C CP A Sbjct: 240 YVRTEP-LLCAHSRAGQTGCTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGA 298 Query: 55 IKPDTEPGLELWLKINS 71 I D P L +I + Sbjct: 299 ITYDAPPTDALMRRIQT 315 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V ++NC LC CV +CP + + L D C+ CG+C CP DAI Sbjct: 476 VSSDNCTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAI 527 >gi|92118585|ref|YP_578314.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801479|gb|ABE63854.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 674 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 V E C LC CV CP Y+ L D C+ CG+C+ CP IK Sbjct: 516 VDVEGCTLC--LSCVSACPTGALYDDPERPVLRFTEDACVQCGLCQATCPEKVIK 568 >gi|39997802|ref|NP_953753.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|39984694|gb|AAR36080.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|298506743|gb|ADI85466.1| ferredoxin-related protein [Geobacter sulfurreducens KN400] Length = 56 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M++ ++++C C CV+ CPV+ + I D CIDCG C CPV AI Sbjct: 1 MSHAISDDCTNCGA--CVDSCPVNAIAPAGDKHKIDADTCIDCGACVDTCPVSAIS 54 >gi|229580878|ref|YP_002839277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|228011594|gb|ACP47355.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] Length = 398 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T I C H D C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 46 TALSIACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|254520968|ref|ZP_05133023.1| ferredoxin [Stenotrophomonas sp. SKA14] gi|219718559|gb|EED37084.1| ferredoxin [Stenotrophomonas sp. SKA14] Length = 137 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 79 VALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|158334537|ref|YP_001515709.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acaryochloris marina MBIC11017] gi|158304778|gb|ABW26395.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Acaryochloris marina MBIC11017] Length = 75 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPD-------ECIDCGVCEPECPVDA 54 DCV+ CPV C +EG I D CIDCG+C+ CPVD Sbjct: 14 ADCVDACPVACIHEGPGKNVIGTDWYWIDFSTCIDCGICQQVCPVDG 60 >gi|162605692|ref|XP_001713361.1| RNase L inhibitor [Guillardia theta] gi|13794293|gb|AAK39670.1|AF083031_27 RNase L inhibitor [Guillardia theta] Length = 598 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 7/48 (14%) Query: 16 DCVEVCPVD-----CFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C + CPV+ C + N + IH CI CG+C +CP DAIK Sbjct: 29 ECKKNCPVEKAGKLCIKIEDSNNIVNIHEINCIGCGICVKKCPYDAIK 76 >gi|330836748|ref|YP_004411389.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748651|gb|AEC02007.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta coccoides DSM 17374] Length = 55 Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + +T+ CI C C CPV+ EG+ ++ I D CIDCG C CP AI Sbjct: 1 MAHKITDACIACGT--CQPECPVNAISEGDIYV-IDADACIDCGACASACPTSAI 52 >gi|126656100|ref|ZP_01727484.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] gi|126622380|gb|EAZ93086.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] Length = 75 Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +EG ++ I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAILPEERPDLQ 71 >gi|124027372|ref|YP_001012692.1| putative ATPase RIL [Hyperthermus butylicus DSM 5456] gi|123978066|gb|ABM80347.1| RNase L inhibitor, ATPase [Hyperthermus butylicus DSM 5456] Length = 613 Score = 40.4 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 11/56 (19%) Query: 11 LCK----HTDCVEVCPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LCK H +C+ CPV+ F E I+ + C+ CG+C +CP AI Sbjct: 11 LCKPSKCHRECIAFCPVNLTGGKAIEFDEARRKPVIYEETCVGCGICVKKCPFKAI 66 >gi|293415783|ref|ZP_06658426.1| polyferredoxin [Escherichia coli B185] gi|291433431|gb|EFF06410.1| polyferredoxin [Escherichia coli B185] Length = 284 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CI+C VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIRGVNSP 69 >gi|237735737|ref|ZP_04566218.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229381482|gb|EEO31573.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 203 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+++ CI C C CP C G + I D C+ CG+C CPV AI Sbjct: 150 YLISNRCIACDR--CKRECPQQCIKSGSKY-KIMQDHCLHCGLCYENCPVRAI 199 >gi|157377554|ref|YP_001476154.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319928|gb|ABV39026.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 563 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 ++ C LC CV CP +G + A+H +C+ CG+CE CP I Sbjct: 430 SDKCTLC--LSCVSTCPTQALTDGGDKPALHFVEQDCVQCGLCESACPEKVI 479 >gi|86748357|ref|YP_484853.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris HaA2] gi|86571385|gb|ABD05942.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris HaA2] Length = 607 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VVT C C+ C+ + CP D ++EG + + I P CI C +C C +D IK Sbjct: 544 VVTSQCTACQ--SCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIA 601 Query: 59 TEP 61 T P Sbjct: 602 TPP 604 >gi|298375682|ref|ZP_06985639.1| ferredoxin 2 [Bacteroides sp. 3_1_19] gi|298268182|gb|EFI09838.1| ferredoxin 2 [Bacteroides sp. 3_1_19] Length = 459 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 9/107 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGL 63 + CI C H C++ CP + IH D C+DCG C CP +AI + D + Sbjct: 15 DRCIGCTH--CMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Query: 64 ELWLKIN---SEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + ++ + + Q+ TT+KE + + ++ G ++ F+ + Sbjct: 73 DYRCRVALMPTVFIGQFSKYTTEKEIISAVMEL-GFTHVFQVEFTAD 118 >gi|241759531|ref|ZP_04757634.1| ferredoxin, 4Fe-4S bacterial type [Neisseria flavescens SK114] gi|241320088|gb|EER56449.1| ferredoxin, 4Fe-4S bacterial type [Neisseria flavescens SK114] Length = 283 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQSFL 136 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++T + P A + + ++E++ Sbjct: 137 PSARRFST---------SAEPRFAAAEHAQSRFERH 163 >gi|20092258|ref|NP_618333.1| hypothetical protein MA3446 [Methanosarcina acetivorans C2A] gi|19917495|gb|AAM06813.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 360 Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +VV CI C CVE+CPV + I P CI CG C CP AI + E Sbjct: 181 HVVEAKCIGCGR--CVEICPVGAASLEGDVSRIDPGICISCGQCMEVCPEGAIDINWEED 238 Query: 63 LELWLKINSEYA 74 + +L+ +EYA Sbjct: 239 IPEFLECLTEYA 250 >gi|111018602|ref|YP_701574.1| Fe-S ferredoxin-type protein [Rhodococcus jostii RHA1] gi|110818132|gb|ABG93416.1| probable Fe-S ferredoxin-type protein [Rhodococcus jostii RHA1] Length = 110 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 VV + C+ C C++VCP D F G + + + H ++C C +CE CP DA+ Sbjct: 5 VVADRCVQCDI--CIKVCPTDVFRRGTDGVPVVAHQEDCQTCFMCEANCPTDAL 56 >gi|17230406|ref|NP_486954.1| hypothetical protein asl2914 [Nostoc sp. PCC 7120] gi|75907209|ref|YP_321505.1| 4Fe-4S ferredoxin [Anabaena variabilis ATCC 29413] gi|17132008|dbj|BAB74613.1| asl2914 [Nostoc sp. PCC 7120] gi|75700934|gb|ABA20610.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anabaena variabilis ATCC 29413] Length = 74 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +EG ++ I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVDACPVACIHEGPGKNVKGTDWYWIDFSTCIDCGICLQVCPVEKAIVPEERPDLQ 71 >gi|67925387|ref|ZP_00518736.1| 4Fe-4S ferredoxin, iron-sulfur binding [Crocosphaera watsonii WH 8501] gi|67852761|gb|EAM48171.1| 4Fe-4S ferredoxin, iron-sulfur binding [Crocosphaera watsonii WH 8501] Length = 75 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DC + CPV C ++G ++ I D CIDCG+C CPV+ AI Sbjct: 5 IVTEVCE--GIADCADACPVACIHDGPGKNIKGTDWYWIDFDTCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P+ P L+ Sbjct: 63 APEERPDLQ 71 >gi|331653947|ref|ZP_08354948.1| putative polyferredoxin [Escherichia coli M718] gi|331048796|gb|EGI20872.1| putative polyferredoxin [Escherichia coli M718] Length = 284 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CVE CP E +A+ ++CI+C VC+ CP +AI+ P Sbjct: 25 CVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIRGVNSP 69 >gi|126664781|ref|ZP_01735765.1| formate dehydrogenase, iron-sulfur subunit, putative [Marinobacter sp. ELB17] gi|126631107|gb|EBA01721.1| formate dehydrogenase, iron-sulfur subunit, putative [Marinobacter sp. ELB17] Length = 134 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 18 VEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 + VCP DCFY+ E+ + +H D CI CG C CP A Sbjct: 1 MAVCPTDCFYQTEDGIVLHSKDLCIGCGYCFYACPFGA 38 >gi|325478783|gb|EGC81894.1| ferredoxin [Anaerococcus prevotii ACS-065-V-Col13] Length = 57 Score = 40.4 bits (93), Expect = 0.089, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI Sbjct: 1 MAYRIDENTCISCGT--CEGECPVGAISQGDAAYEIDADACIDCGSCAAVCPVEAI 54 >gi|255993975|ref|ZP_05427110.1| conserved domain protein [Eubacterium saphenum ATCC 49989] gi|255993643|gb|EEU03732.1| conserved domain protein [Eubacterium saphenum ATCC 49989] Length = 55 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C+ CPV+ EG + +I P+ CIDCG C C AI Sbjct: 1 MAYEITDACVACGA--CISECPVEAISEGSPY-SIDPNTCIDCGACASVCGAAAI 52 >gi|218887758|ref|YP_002437079.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758712|gb|ACL09611.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 180 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C CP + + + + ++ D CI CG C CPVDAI D E GL Sbjct: 54 CLACNPAPCALACPTGAYVQRKGGGVKVNRDLCIRCGNCAAACPVDAIHLDGETGL 109 >gi|253702471|ref|YP_003023660.1| Fis family transcriptional regulator [Geobacter sp. M21] gi|251777321|gb|ACT19902.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. M21] Length = 759 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T++C C CV CPV +++ I P+ CI CG C CP A Sbjct: 7 ITDHCRKC--YSCVRSCPVKAIKVEKSYTEIIPERCIGCGNCMSHCPQHA 54 >gi|89897355|ref|YP_520842.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336803|dbj|BAE86398.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 228 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 LC H D CV+ CP Y+ + L +H P++CI C C CP + I +++ +W Sbjct: 57 LCNHCDNAACVKACPTKAMYKDDKGLTLHNPNKCIGCKSCMQACPYEVINYNSKEPHGIW 116 >gi|219670089|ref|YP_002460524.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540349|gb|ACL22088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 56 Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ CI C C CPV G++ I D C DCG C CP A P Sbjct: 1 MAYVINSECISCGA--CEAECPVGAISAGDDLYVIDADTCTDCGSCAGVCPTGAPNP 55 >gi|210615774|ref|ZP_03290755.1| hypothetical protein CLONEX_02973 [Clostridium nexile DSM 1787] gi|210150110|gb|EEA81119.1| hypothetical protein CLONEX_02973 [Clostridium nexile DSM 1787] Length = 502 Score = 40.0 bits (92), Expect = 0.092, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V++ C C C EVCPV + I ++CI CG C+ CP DAI P Sbjct: 116 YEVSDMCKGCVAHPCREVCPVGAISMKKGRSYIDQEKCIKCGKCKSVCPYDAISKKERP 174 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 31/136 (22%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C VCP D + E A I D+C+ CG Sbjct: 146 SYIDQEKCIKC--GKCKSVCPYDAISKKERPCAKACGVNAIGSDKMGRAHIDNDKCVSCG 203 Query: 45 VCEPECPVDAIKPDTE---------PGLELWLKINSEYATQW-PNITTKKESLPSAAKMD 94 +C CP AI ++ G E+ +I + Q+ PNIT + + +A + Sbjct: 204 MCMVSCPFGAISDKSQIFQLGRALKEGGEIIAEIAPAFVGQFGPNITPR--HIKAALQEL 261 Query: 95 GVKQKYEKYFSPNPGG 110 G + YE + G Sbjct: 262 GFAEVYEVALGADIGA 277 >gi|323968658|gb|EGB64063.1| DMSO reductase anchor subunit protein [Escherichia coli M863] gi|327252703|gb|EGE64357.1| dimethylsulfoxide reductase, chain B [Escherichia coli STEC_7v] Length = 489 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 61 YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK 120 Query: 62 G 62 G Sbjct: 121 G 121 >gi|225570648|ref|ZP_03779671.1| hypothetical protein CLOHYLEM_06748 [Clostridium hylemonae DSM 15053] gi|225160566|gb|EEG73185.1| hypothetical protein CLOHYLEM_06748 [Clostridium hylemonae DSM 15053] Length = 274 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+EVCP D + I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCMEVCPKDAVSMVKGRSYIDQEKCIKCGKCKSVCPYDAISRKERP 175 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 31/127 (24%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D E I+ ++C+ CG Sbjct: 147 SYIDQEKCIKCGK--CKSVCPYDAISRKERPCQKACGVGAIESDNCGRARINNEKCVSCG 204 Query: 45 VCEPECPVDAIKPDTE---------PGLELWLKINSEYATQWP-NITTKKESLPSAAKMD 94 +C CP AI ++ G E+ +I +A Q+ NIT + +L +A + Sbjct: 205 MCMVSCPFGAISDKSQIFQLARALTEGDEIVAEIAPAFAGQFGDNITPR--NLKAALQEL 262 Query: 95 GVKQKYE 101 G + YE Sbjct: 263 GFSEVYE 269 >gi|145592563|ref|YP_001154565.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145284331|gb|ABP51913.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 96 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLEL 65 E C C+ C +CP C+ + +++ + + C++CG C CP I+ + G+ + Sbjct: 32 ERCKKCEKKPCTYMCPAKCYVQQGDYIVLSTEACVECGTCRVVCPHGNIEWNYPRSGMGI 91 Query: 66 WLKI 69 W + Sbjct: 92 WYRF 95 >gi|15668371|ref|NP_247167.1| ferredoxin [Methanocaldococcus jannaschii DSM 2661] gi|1590944|gb|AAB98183.1| ferredoxin [Methanocaldococcus jannaschii DSM 2661] Length = 65 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LCK +C E CP++ F EG+ + PD+C CGVCE CP A+K + E Sbjct: 12 LCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE 65 >gi|325661658|ref|ZP_08150282.1| hypothetical protein HMPREF0490_01016 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472185|gb|EGC75399.1| hypothetical protein HMPREF0490_01016 [Lachnospiraceae bacterium 4_1_37FAA] Length = 504 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I +CI CG C+ CP DAI P Sbjct: 118 YEVSNMCKGCLAHPCAEVCPKDAISMVNGHSYIDQSKCIKCGKCKSACPYDAIAKKERP 176 >gi|190575367|ref|YP_001973212.1| ferredoxin [Stenotrophomonas maltophilia K279a] gi|190013289|emb|CAQ46923.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] Length = 137 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 79 VALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|254459827|ref|ZP_05073243.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2083] gi|206676416|gb|EDZ40903.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 648 Score = 40.0 bits (92), Expect = 0.095, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ +C++VCP ++I P C CG C CP AI D P Sbjct: 265 LCAHSRAEQAACSNCLDVCPTGAITPAGEHVSIDPMICAGCGSCSAVCPSGAISSDAPPV 324 Query: 63 LELWLKINSEYAT 75 ++ ++N+ +T Sbjct: 325 DAIFSRLNTLSST 337 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP AI KP Sbjct: 495 VDTDACTLC--LSCVSLCPSGALGDNSDLPQLRFQEDACLQCGLCSNICPEKAITLKPQV 552 Query: 60 E 60 + Sbjct: 553 D 553 >gi|331084747|ref|ZP_08333835.1| hypothetical protein HMPREF0987_00138 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410841|gb|EGG90263.1| hypothetical protein HMPREF0987_00138 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 504 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I +CI CG C+ CP DAI P Sbjct: 118 YEVSNMCKGCLAHPCAEVCPKDAISMVNGHSYIDQSKCIKCGKCKSACPYDAIAKKERP 176 >gi|194366700|ref|YP_002029310.1| ferredoxin [Stenotrophomonas maltophilia R551-3] gi|194349504|gb|ACF52627.1| electron transport complex, RnfABCDGE type, B subunit [Stenotrophomonas maltophilia R551-3] Length = 137 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 79 VALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|120022|sp|P00194|FER1_RHORU RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|351273|prf||0905209A ferredoxin Length = 55 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + E CI C C CPV+ +G+ ++ D CIDCG C CPV A Sbjct: 1 AYKIEETCISCGA--CAAECPVNAIEQGDTIFVVNADTCIDCGNCANVCPVGA 51 >gi|258515175|ref|YP_003191397.1| Electron transfer flavoprotein alpha/beta- subunit [Desulfotomaculum acetoxidans DSM 771] gi|257778880|gb|ACV62774.1| Electron transfer flavoprotein alpha/beta- subunit [Desulfotomaculum acetoxidans DSM 771] Length = 441 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 MT V+ CI C+ C+ CP Y +N L + CI+CG C CPV AI Sbjct: 1 MTVNVSNTCIGCQA--CISACPHGALYIDDNGLCKVIAKNCIECGGCIGVCPVGAI 54 >gi|253579276|ref|ZP_04856546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849374|gb|EES77334.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 505 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 26/58 (44%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++TE C C CVEVCP + I D CI CG C CP +AI P Sbjct: 114 MITEGCQGCLEHPCVEVCPKKAVHMEGGRSHIDEDACIKCGKCLEACPYNAIIKQERP 171 >gi|148239575|ref|YP_001224962.1| ferredoxin [Synechococcus sp. WH 7803] gi|147848114|emb|CAK23665.1| Ferredoxin [Synechococcus sp. WH 7803] Length = 74 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVDA 54 DCV+ CPV C +G +F I D CIDCG+C CPVD Sbjct: 14 ADCVDACPVACIQPGKGKNKKGTDFYWIDFDTCIDCGICLQVCPVDG 60 >gi|295107121|emb|CBL04664.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 253 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E+C C+ C+ CPV Y E A + D CI CG+C CP + D+E G+ Sbjct: 150 EHCKQCEDPACMNYCPVHAIYADEKSGARKVDADRCIGCGMCSQACPWNMPVVDSETGVS 209 Query: 65 LWLKINSEYATQWPNITTK 83 A Q PN K Sbjct: 210 TKCISCGRCAEQCPNGAIK 228 >gi|154148560|ref|YP_001406021.1| formate dehydrogenase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] gi|153804569|gb|ABS51576.1| formate dehydrogenase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] Length = 187 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 Y T C C C +VCPV CFY + + +H +CI CG C CP A Sbjct: 50 YSSTLACQHCTDAPCAQVCPVKCFYIRADGIVLHDKKKCIGCGYCLYACPFGA 102 >gi|150399566|ref|YP_001323333.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Methanococcus vannielii SB] gi|150012269|gb|ABR54721.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanococcus vannielii SB] Length = 85 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C++C+ +C CP C E I D C C +CE ECPV AIK + E Sbjct: 32 EKCVMCE--NCYIFCPEGCIQEKNGKFEIDYDYCKGCLICERECPVKAIKAERE 83 >gi|54309051|ref|YP_130071.1| iron-sulfur cluster-binding protein [Photobacterium profundum SS9] gi|46913483|emb|CAG20269.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum SS9] Length = 581 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP 57 T++C LC CV VCP F+ G L + ++CI CG+CE CP V +KP Sbjct: 446 TDDCTLC--MSCVAVCPTRAFHAVGGRPGLQLIEEDCIQCGLCEKACPEKVLTLKP 499 >gi|288802958|ref|ZP_06408394.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|302345157|ref|YP_003813510.1| ferredoxin [Prevotella melaninogenica ATCC 25845] gi|288334475|gb|EFC72914.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|302149382|gb|ADK95644.1| ferredoxin [Prevotella melaninogenica ATCC 25845] Length = 55 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CPV+ EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPVEAISEGDIY-KIDADACTECGTCASVCPSEAIS 53 >gi|167746910|ref|ZP_02419037.1| hypothetical protein ANACAC_01622 [Anaerostipes caccae DSM 14662] gi|167653870|gb|EDR97999.1| hypothetical protein ANACAC_01622 [Anaerostipes caccae DSM 14662] Length = 304 Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C H C++VCP ++ + +H ++CI C C ECP A+K + E Sbjct: 59 KKCIGCHH--CIDVCPSKAISLIQDHIRVHAEKCIGCRQCVLECPGKALKSEGE 110 >gi|255656166|ref|ZP_05401575.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-23m63] gi|296450400|ref|ZP_06892156.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP08] gi|296879477|ref|ZP_06903471.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP07] gi|296260661|gb|EFH07500.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP08] gi|296429623|gb|EFH15476.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP07] Length = 151 Score = 40.0 bits (92), Expect = 0.100, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C++VCP +CF + E F+ + CI C +CE C A+ Sbjct: 66 CIHCDEPKCLDVCPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGAL 112 >gi|311697015|gb|ADP99888.1| protein containing 4Fe-4S ferredoxin, iron-sulfur binding, subgroup domains [marine bacterium HP15] Length = 637 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 14/84 (16%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP- 61 LC H T C++VCP + + + + I D C CG C CP A+ + P Sbjct: 258 LCAHSRANKPGCTRCLDVCPTEAIFSFGDHIQIDSDICAGCGSCAAVCPTSAVTMNETPF 317 Query: 62 -----GLELWLKINSEYATQWPNI 80 +E+ K+ E+ + P + Sbjct: 318 EAITKAVEVMAKVYREHTHESPRL 341 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 18/59 (30%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 ++ C LC CV +CP L HPD C+ CG+CE CP AI Sbjct: 490 SDKCTLC--LACVSLCPTGA-------LGDHPDRPEVQFTENACVQCGICESTCPETAI 539 >gi|308051293|ref|YP_003914859.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307633483|gb|ADN77785.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 193 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF + + + H D+CI CG C CP A Sbjct: 54 ISVACMHCSDAPCMAVCPADCFEQTADGIIRHSKDKCIGCGYCLYACPFGA 104 >gi|239628141|ref|ZP_04671172.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518287|gb|EEQ58153.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 483 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y+VT+NC C C C G I P +C +CG C CP +AI P Sbjct: 93 SYIVTDNCRKCMGKACQNSCNFGAISMGRERAYIDPAKCKECGKCSQACPYNAIAHLERP 152 >gi|320353396|ref|YP_004194735.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121898|gb|ADW17444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 253 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 17/88 (19%) Query: 9 CILCKHTDCVEVCPVDC-------FYEG--ENFLAIHPDECIDCGVCEPECPVDA----- 54 C+ C + CV CPV EG + I+ ++CI CG C P CP DA Sbjct: 81 CMQCDNPPCVAACPVKGKDGATWKSTEGLSAGLVMINYEQCIGCGACVPACPYDARTMDQ 140 Query: 55 --IKPDTEPGLELWLKINS-EYATQWPN 79 + D P ++ + + S EY +WP Sbjct: 141 GGMHGDGTPAIQKYETMASYEYGKKWPR 168 >gi|296449690|ref|ZP_06891460.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296877993|ref|ZP_06902012.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] gi|296261414|gb|EFH08239.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296431061|gb|EFH16889.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] Length = 509 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP + ++ EN A IH ++C++CG C CP AI K P ++ Sbjct: 177 CKSVCPTNALGFDRENMKAMIHEEKCLNCGACMSACPFGAISDKSLIAPVARKLVQKEKM 236 Query: 73 YATQWPNITTKKES 86 YA P IT + E+ Sbjct: 237 YAVVAPAITGQVEA 250 >gi|294495829|ref|YP_003542322.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] gi|292666828|gb|ADE36677.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] Length = 369 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 CVEVCP D +N I D+CI CG C CPV+AI + E + ++++ +EYA Sbjct: 202 CVEVCPCDAMEINNDNISTIDDDKCIGCGECMTVCPVEAIGFNYE-NIPDFMEMMTEYA 259 >gi|262381755|ref|ZP_06074893.1| ferredoxin 2 [Bacteroides sp. 2_1_33B] gi|262296932|gb|EEY84862.1| ferredoxin 2 [Bacteroides sp. 2_1_33B] Length = 459 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C H C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGCTH--CMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Query: 67 ------LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + + + Q+ TT+KE + + ++ G ++ F+ + Sbjct: 73 DYKCRVALMPTVFIGQFSKYTTEKEIISAVMEL-GFTHVFQVEFTAD 118 >gi|150007737|ref|YP_001302480.1| ferredoxin 2 [Parabacteroides distasonis ATCC 8503] gi|301310227|ref|ZP_07216166.1| ferredoxin 2 [Bacteroides sp. 20_3] gi|149936161|gb|ABR42858.1| ferredoxin 2 [Parabacteroides distasonis ATCC 8503] gi|300831801|gb|EFK62432.1| ferredoxin 2 [Bacteroides sp. 20_3] Length = 459 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C H C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGCTH--CMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Query: 67 ------LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + + + Q+ TT+KE + + ++ G ++ F+ + Sbjct: 73 DYKCRVALMPTVFIGQFSKYTTEKEIISAVMEL-GFTHVFQVEFTAD 118 >gi|225405722|ref|ZP_03760911.1| hypothetical protein CLOSTASPAR_04943 [Clostridium asparagiforme DSM 15981] gi|225042746|gb|EEG52992.1| hypothetical protein CLOSTASPAR_04943 [Clostridium asparagiforme DSM 15981] Length = 484 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I P +C CG C CP +AI P Sbjct: 93 AYVVTDNCQKCMGKACQNSCNFGAISMGRDRAYIDPAKCKSCGKCSQACPYNAIAHLERP 152 >gi|154498762|ref|ZP_02037140.1| hypothetical protein BACCAP_02753 [Bacteroides capillosus ATCC 29799] gi|150272152|gb|EDM99356.1| hypothetical protein BACCAP_02753 [Bacteroides capillosus ATCC 29799] Length = 447 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C++ CP + AI CIDCGVC CP AIK ++P Sbjct: 19 TTCIKSCPTEAIRVRNGKAAILNARCIDCGVCIQVCPHKAIKSISDP 65 >gi|2494421|sp|Q57652|FER4_METJA RecName: Full=Uncharacterized ferredoxin MJ0199 Length = 62 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LCK +C E CP++ F EG+ + PD+C CGVCE CP A+K + E Sbjct: 9 LCKGAECAECVNNCPMEVFEIEGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE 62 >gi|317471719|ref|ZP_07931060.1| glycyl-radical enzyme activating protein family [Anaerostipes sp. 3_2_56FAA] gi|316900823|gb|EFV22796.1| glycyl-radical enzyme activating protein family [Anaerostipes sp. 3_2_56FAA] Length = 304 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C H C++VCP ++ + +H ++CI C C ECP A+K + E Sbjct: 59 KKCIGCHH--CIDVCPSKAISLIQDHIRVHAEKCIGCRQCVLECPGKALKSEGE 110 >gi|126739780|ref|ZP_01755471.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126719012|gb|EBA15723.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 653 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 2 TYVVTENCILCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 T + + +LC H+ C++ CP + + I P C CG C CP Sbjct: 258 TLYLKNDPVLCAHSRASQAGCSKCLDHCPTSAISPKGDHVTIDPMICAGCGACASLCPSG 317 Query: 54 AIKPDTEPGLELWLKINS 71 AI D P L+L++ + Sbjct: 318 AITYDAPPASALFLRVQT 335 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC C +CP + + L D C+ CG+C CP AIK EP L Sbjct: 502 TESCTLC--LSCASLCPSGALGDNPDLPQLRFQEDACLQCGICANLCPEQAIK--LEPRL 557 Query: 64 EL 65 L Sbjct: 558 NL 559 >gi|256840003|ref|ZP_05545512.1| ferredoxin 2 [Parabacteroides sp. D13] gi|256738933|gb|EEU52258.1| ferredoxin 2 [Parabacteroides sp. D13] Length = 459 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C H C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGCTH--CMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Query: 67 ------LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + + + Q+ TT+KE + + ++ G ++ F+ + Sbjct: 73 DYKCRVALMPTVFIGQFSKYTTEKEIISAVMEL-GFTHVFQVEFTAD 118 >gi|255013558|ref|ZP_05285684.1| ferredoxin 2 [Bacteroides sp. 2_1_7] Length = 459 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C H C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGCTH--CMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Query: 67 ------LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + + + Q+ TT+KE + + ++ G ++ F+ + Sbjct: 73 DYKCRVALMPTVFIGQFSKYTTEKEIISAVMEL-GFTHVFQVEFTAD 118 >gi|169334477|ref|ZP_02861670.1| hypothetical protein ANASTE_00880 [Anaerofustis stercorihominis DSM 17244] gi|169259194|gb|EDS73160.1| hypothetical protein ANASTE_00880 [Anaerofustis stercorihominis DSM 17244] Length = 207 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++C LC C++VC + E E I D C++CG C CP A+ Sbjct: 154 YEITDDCFLCGK--CIKVCSFNAIEEAEEKYKITEDNCLECGNCYSVCPAGAV 204 >gi|83589885|ref|YP_429894.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572799|gb|ABC19351.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 56 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M++ +TE C+ C C + CP EGE+ I P+ C DCG C CP +AI Sbjct: 1 MSHRITEECLACGV--CADECPNGAISEGEDKYEIDPELCTDCGTCMEACPNEAI 53 >gi|167991837|ref|ZP_02572936.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205329900|gb|EDZ16664.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332989454|gb|AEF08437.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 287 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|149374620|ref|ZP_01892394.1| NADH-quinone oxidoreductase, chain I [Marinobacter algicola DG893] gi|149361323|gb|EDM49773.1| NADH-quinone oxidoreductase, chain I [Marinobacter algicola DG893] Length = 182 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +GE F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVDCISLQKGEQEDGRWYPEFFRINFSRCIFCGMCEEACPTSAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 LTPDFEMG 125 >gi|297618232|ref|YP_003703391.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297146069|gb|ADI02826.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 58 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M+YV+T+ C+ C CV+ CPV E E+ I P+ C +CG C CP A K Sbjct: 1 MSYVITDECVACGV--CVDECPVGAITEHEDKYIIDPELCTECGSCVDACPTGAPK 54 >gi|46198462|ref|YP_004129.1| nrfC protein [Thermus thermophilus HB27] gi|190016225|pdb|2VPW|B Chain B, Polysulfide Reductase With Bound Menaquinone gi|190016228|pdb|2VPW|F Chain F, Polysulfide Reductase With Bound Menaquinone gi|190016231|pdb|2VPX|B Chain B, Polysulfide Reductase With Bound Quinone (Uq1) gi|190016234|pdb|2VPX|F Chain F, Polysulfide Reductase With Bound Quinone (Uq1) gi|190016237|pdb|2VPY|B Chain B, Polysulfide Reductase With Bound Quinone Inhibitor, Pentachlorophenol (Pcp) gi|190016240|pdb|2VPY|F Chain F, Polysulfide Reductase With Bound Quinone Inhibitor, Pentachlorophenol (Pcp) gi|190016243|pdb|2VPZ|B Chain B, Polysulfide Reductase Native Structure gi|190016246|pdb|2VPZ|F Chain F, Polysulfide Reductase Native Structure gi|46196084|gb|AAS80502.1| nrfC protein [Thermus thermophilus HB27] Length = 195 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 E C+ C++ CV VCP Y+ ++ L + P +CI CG C CP DA Sbjct: 56 EQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDA 104 >gi|313667518|ref|YP_004047802.1| ferredoxin [Neisseria lactamica ST-640] gi|313004980|emb|CBN86408.1| putative ferredoxin [Neisseria lactamica 020-06] Length = 279 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKFMHTVIADECTGCGLCVAPCPVDCI 124 >gi|313672580|ref|YP_004050691.1| 4fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] gi|312939336|gb|ADR18528.1| 4Fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] Length = 56 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + +T+ C C C + CPV E + I D C DCG C CPVDAI+ Sbjct: 1 MAHFITDACTNCGA--CEDECPVGAISEADGKRVIDADTCTDCGACAEVCPVDAIEA 55 >gi|302343184|ref|YP_003807713.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha [Desulfarculus baarsii DSM 2075] gi|301639797|gb|ADK85119.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfarculus baarsii DSM 2075] Length = 632 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 12 CK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CK H DC+ FY + AI+ +CI C +C CP +AI P E Sbjct: 582 CKNHRDCINTVACPAFYIAGDQPAINASQCIGCALCAQICPENAITPVKE 631 >gi|302379538|ref|ZP_07268023.1| protein HymB [Finegoldia magna ACS-171-V-Col3] gi|303234547|ref|ZP_07321184.1| protein HymB [Finegoldia magna BVS033A4] gi|302312445|gb|EFK94441.1| protein HymB [Finegoldia magna ACS-171-V-Col3] gi|302494381|gb|EFL54150.1| protein HymB [Finegoldia magna BVS033A4] Length = 626 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C EG + I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCI-EGAVKKQHVIDKSQCIKCGNCETVCPVHAV 623 >gi|168187953|ref|ZP_02622588.1| conserved domain protein [Clostridium botulinum C str. Eklund] gi|169294213|gb|EDS76346.1| conserved domain protein [Clostridium botulinum C str. Eklund] Length = 57 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + + ++C+ C C CPV +G++ I CIDCG C CPV AI Sbjct: 1 MAFKIGDSCVSCGS--CASECPVGAISQGDSQFDIDASACIDCGNCANVCPVGAIAA 55 >gi|167760379|ref|ZP_02432506.1| hypothetical protein CLOSCI_02753 [Clostridium scindens ATCC 35704] gi|167662052|gb|EDS06182.1| hypothetical protein CLOSCI_02753 [Clostridium scindens ATCC 35704] Length = 382 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV ENCI C +C+ VC D + I D+C+ CG C CP DA+ P + Sbjct: 205 YVEVENCIGC--GNCIRVCAHDAPKITDRKAFIDHDKCVGCGRCIGVCPKDAVCPPNDES 262 Query: 63 LELWLKINSEYA 74 ++ K +EY+ Sbjct: 263 NDILNKKIAEYS 274 >gi|118602190|ref|YP_903405.1| electron transport complex, RnfABCDGE type, B subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567129|gb|ABL01934.1| electron transport complex, RnfABCDGE type, B subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 179 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + +V CI C T C++VCPVD F + + DEC C +C P CPVD I Sbjct: 110 VVFVDEAVCIGC--TLCIQVCPVDAFLGASKMMTQVIIDECTGCDLCIPVCPVDCI 163 >gi|298490238|ref|YP_003720415.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein ['Nostoc azollae' 0708] gi|298232156|gb|ADI63292.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein ['Nostoc azollae' 0708] Length = 75 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C +EG ++ I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVSACPVACIHEGPGKNIKGTDWYWIDVATCIDCGICLQVCPVEGAILPEERPELQ 71 >gi|62181094|ref|YP_217511.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128727|gb|AAX66430.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715581|gb|EFZ07152.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 287 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAIIGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|312143460|ref|YP_003994906.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium sp. 'sapolanicus'] gi|311904111|gb|ADQ14552.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium sp. 'sapolanicus'] Length = 331 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C + CV+ CPVD +N I ++C+DCG+C +CP I+ E Sbjct: 216 GCIAC--SLCVKACPVDAIEMKDNLAVIDYEKCVDCGICAEKCPTGTIEFQGE 266 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + +NC+ C T C + CPVD EGE I + CI CG+C C VDA+ E Sbjct: 273 INDNCVGC--TLCAKACPVD-AVEGEIKKLHKIDQNLCIQCGLCYEACNVDAVDLFYESD 329 Query: 63 LE 64 L+ Sbjct: 330 LD 331 >gi|257790220|ref|YP_003180826.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830340|ref|ZP_08163797.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|257474117|gb|ACV54437.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487807|gb|EGC90245.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 215 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C++ CV VCPV Y G++ + I D CI C C CP A D Sbjct: 63 CMQCENPACVSVCPVSATYRGDDGIVVIDADRCIGCKYCIAACPYGARSAD 113 >gi|16765847|ref|NP_461462.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197262713|ref|ZP_03162787.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16421071|gb|AAL21421.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240968|gb|EDY23588.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|261247723|emb|CBG25551.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994646|gb|ACY89531.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159076|emb|CBW18590.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913514|dbj|BAJ37488.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222772|gb|EFX47843.1| Putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130855|gb|ADX18285.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 287 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|325294634|ref|YP_004281148.1| iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065082|gb|ADY73089.1| iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 64 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y+ CI CK C+EVCP+ F GE + ++P++C C +C CPVDAI Sbjct: 4 VSYIDQGLCIGCKI--CIEVCPMGVFVMSGEKAVVMNPEKCNGCEICVENCPVDAI 57 >gi|169824852|ref|YP_001692463.1| NADP-reducing hydrogenase [Finegoldia magna ATCC 29328] gi|167831657|dbj|BAG08573.1| NADP-reducing hydrogenase [Finegoldia magna ATCC 29328] Length = 626 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C EG + I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCI-EGAVKKQHVIDKSQCIKCGNCETVCPVHAV 623 >gi|291165527|gb|EFE27577.1| ferredoxin [Filifactor alocis ATCC 35896] gi|320120475|gb|ADW16160.1| hypothetical protein HMPREF0389_01715 [Filifactor alocis ATCC 35896] Length = 56 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++++CI C C CPV +G+ I CIDCG C CPV A K + Sbjct: 1 MAYKISDSCIGCGA--CEGECPVGAISQGDTQYIIDASACIDCGACAGVCPVGAPKAE 56 >gi|167549451|ref|ZP_02343210.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168466721|ref|ZP_02700575.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821497|ref|ZP_02833497.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195630838|gb|EDX49430.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205325401|gb|EDZ13240.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205342030|gb|EDZ28794.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087023|emb|CBY96792.1| NADH-quinone oxidoreductase subunits H/I NADH dehydrogenase I subunits H/I; NDH-1 subunit H/I [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 287 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAIIGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|298369582|ref|ZP_06980899.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282139|gb|EFI23627.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 284 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C+ CPVD + + DEC CG+C CPVD I Sbjct: 72 LAWIDETACIGC--TACIRACPVDAIMGARKLMHTVIADECTGCGLCVAPCPVDCI 125 >gi|327400962|ref|YP_004341801.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus veneficus SNP6] gi|327316470|gb|AEA47086.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus veneficus SNP6] Length = 753 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 VTENCI C+ C EVC + E I + C CG C CPVDAI Sbjct: 554 VTENCIGCRL--CAEVCRFNAVVIDERSGKAKIDANACAMCGACVAACPVDAI 604 >gi|323492673|ref|ZP_08097817.1| formate dehydrogenase, iron-sulfur subunit [Vibrio brasiliensis LMG 20546] gi|323313048|gb|EGA66168.1| formate dehydrogenase, iron-sulfur subunit [Vibrio brasiliensis LMG 20546] Length = 202 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP DCF E+ + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCKAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|257053166|ref|YP_003130999.1| NADH dehydrogenase (quinone) [Halorhabdus utahensis DSM 12940] gi|256691929|gb|ACV12266.1| NADH dehydrogenase (quinone) [Halorhabdus utahensis DSM 12940] Length = 634 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E+CI C+ CV+ CP+D E I P C+ CG C CPVD I+ Sbjct: 580 IIAEDCIGCQQ--CVDACPIDAISGEPGEVHEIDPAACVGCGQCVDPCPVDTIE 631 >gi|224582936|ref|YP_002636734.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467463|gb|ACN45293.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 287 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAIIGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|171186440|ref|YP_001795359.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935652|gb|ACB40913.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 96 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLELWL 67 C C+ C +CP C+ + + + + + C++CG C CP D I D G+ +W Sbjct: 34 CKRCEKKPCTYMCPAKCYVQQGDGVVLSTEACVECGTCRVVCPYDNIDWDYPRSGMGIWY 93 Query: 68 K 68 + Sbjct: 94 R 94 >gi|21226237|ref|NP_632159.1| ferredoxin oxidoreductase [Methanosarcina mazei Go1] gi|20904473|gb|AAM29831.1| Ferredoxin oxidoreductase [Methanosarcina mazei Go1] Length = 438 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI CK E CP+ +GEN +P+ C +CG+C C +A + + Sbjct: 333 CINCKVCPVAEACPMGAVSKGENGAEHNPELCFNCGLCISRCRGEAFRAN 382 >gi|288929911|ref|ZP_06423753.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] gi|288328730|gb|EFC67319.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] Length = 55 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C+ CPV+ EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVISDDCIACGT--CLPECPVEAISEGDIY-KIDADACTECGTCASVCPSEAIS 53 >gi|218778029|ref|YP_002429347.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759413|gb|ACL01879.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 352 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E C +D E+ ++PD CI CGVC +CP DA+ Sbjct: 276 EKCIAC--GACAEACHMDAITV-EDAAFVNPDRCIGCGVCVSQCPSDAM 321 >gi|297620125|ref|YP_003708230.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297379102|gb|ADI37257.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 419 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 10/70 (14%) Query: 6 TENCILCKHTDCV--EVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVDAIK 56 TENC + C+ +C C E N I+PD C+ CG+C ECPVDAI Sbjct: 308 TENCYIINEDKCIGCRICSKACNVENAISISSETNMPYINPDYCVRCGLCHRECPVDAID 367 Query: 57 -PDTEPGLEL 65 P+T +L Sbjct: 368 FPETSESEKL 377 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 11 LCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLELWLK 68 LC D C +CPV+ N I ++C+ C C CPV +AIK E EL K Sbjct: 127 LCVKCDSCRRICPVNAITYENNVYRIKSNDCVGCNRCATACPVENAIKSYNE--YELSEK 184 Query: 69 IN 70 IN Sbjct: 185 IN 186 >gi|113954804|ref|YP_730603.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311] gi|113882155|gb|ABI47113.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311] Length = 74 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 DCV+ CPV C +G +F I D CIDCG+C CPV +AI P+ L+ Sbjct: 14 ADCVDACPVACIKPGSGANKKGTDFYWIDFDTCIDCGICLQVCPVANAIVPEERADLQ 71 >gi|327484141|gb|AEA78548.1| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio cholerae LMA3894-4] Length = 202 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF + + +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTADGIVLHNKDLCIGCGYCLFACPFGA 103 >gi|323484215|ref|ZP_08089584.1| hypothetical protein HMPREF9474_01335 [Clostridium symbiosum WAL-14163] gi|323692097|ref|ZP_08106344.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] gi|323402457|gb|EGA94786.1| hypothetical protein HMPREF9474_01335 [Clostridium symbiosum WAL-14163] gi|323503897|gb|EGB19712.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] Length = 368 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +V+T+ CI C C C D E +I PD+C CG C CPVDA+ + Sbjct: 191 FVLTDKCIGC--GACKRNCAHDAISIAEKKASIAPDKCAGCGRCIGVCPVDAVANHCDES 248 Query: 63 LELWLKINSEYA 74 ++ K +EY+ Sbjct: 249 NDILNKKIAEYS 260 >gi|312959250|ref|ZP_07773768.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens WH6] gi|311286510|gb|EFQ65073.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens WH6] Length = 320 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 73 VAYIREAECIGC--TKCIQACPVDAIVGAAKLMHTVISDECTGCDLCVAPCPVDCI 126 >gi|147677591|ref|YP_001211806.1| ferredoxin [Pelotomaculum thermopropionicum SI] gi|146273688|dbj|BAF59437.1| ferredoxin [Pelotomaculum thermopropionicum SI] Length = 58 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +++ C+ C C+E CP D EG+ + I PD+C +CG C CP AI Sbjct: 4 VAYKISDECLACGS--CMEACPNDAISEGDIY-KIDPDKCAECGACVDACPTGAI 55 >gi|308184080|ref|YP_003928213.1| ferrodoxin [Helicobacter pylori SJM180] gi|308060000|gb|ADO01896.1| ferrodoxin [Helicobacter pylori SJM180] Length = 83 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 11/80 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ +I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYSIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD---TEPGLELWLKINS 71 I PD E EL K S Sbjct: 59 ILPDPNNAESKEELEYKYES 78 >gi|73667819|ref|YP_303834.1| hypothetical protein Mbar_A0270 [Methanosarcina barkeri str. Fusaro] gi|72394981|gb|AAZ69254.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 377 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T NC LCK CV C E L I+ ++CI C C CP DA++ Sbjct: 314 TSNCALCKA--CVSNCSAHAIEEINRTLKINEEKCIHCYCCRELCPNDAVE 362 >gi|289207331|ref|YP_003459397.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288942962|gb|ADC70661.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 231 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T + +C+ C++ DCV VCP Y+ + + + D+C+ C C CP A + D Sbjct: 65 TVNIPMSCMHCQYADCVNVCPTGASYKRPEDGIVLVDQDKCMGCNYCAWACPYGARELDR 124 Query: 60 EPGL 63 E G+ Sbjct: 125 EDGV 128 >gi|197248415|ref|YP_002147480.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212118|gb|ACH49515.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 287 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A+++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALARLNLALRRY 132 >gi|171186294|ref|YP_001795213.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935506|gb|ACB40767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 368 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E C LC CV VCP D L + P CI CGVC +CP ++ Sbjct: 252 VAEGCTLCGA--CVNVCPTDALSIKGFELRLTPALCIACGVCAEKCPERVVR 301 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C + CP F Y + + D C+DCG+C CPV+A+K + P Sbjct: 84 CIWCGM--CAKSCPATAFEYVERRSIRVMYDRCVDCGLCNALCPVEAVKMPSLP 135 >gi|149375891|ref|ZP_01893658.1| iron-sulfur cluster-binding protein, putative [Marinobacter algicola DG893] gi|149359771|gb|EDM48228.1| iron-sulfur cluster-binding protein, putative [Marinobacter algicola DG893] Length = 659 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 8/59 (13%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LC H T C++VCP + + + + I D C CG C CP AI + P Sbjct: 280 LCAHSRANKPGCTRCLDVCPTEAIFSFGDHVQIDSDICAGCGSCAAVCPTSAITMNESP 338 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 20/69 (28%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAIK 56 ++ C LC CV +CP L HPD C+ CGVCE CP AI Sbjct: 512 SDKCTLC--LACVSLCPTGA-------LGDHPDRPEVQFTENACVQCGVCESTCPETAI- 561 Query: 57 PDTEPGLEL 65 + +P L+L Sbjct: 562 -NLKPQLDL 569 >gi|330835594|ref|YP_004410322.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567733|gb|AEB95838.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 87 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C CK C++VCP + + + +H + C++CG CP DAI Sbjct: 27 CRTCKEKPCIKVCPAGTYERSGDVIEVHYERCLECGAALVACPFDAI 73 >gi|331091265|ref|ZP_08340106.1| hypothetical protein HMPREF9477_00749 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404712|gb|EGG84251.1| hypothetical protein HMPREF9477_00749 [Lachnospiraceae bacterium 2_1_46FAA] Length = 502 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCPV + I +CI CG C+ CP DAI P Sbjct: 116 YEVSNMCKGCVAHPCKEVCPVGAISMKDGHSFIDQTKCIKCGKCKANCPYDAIAKKERP 174 >gi|302875114|ref|YP_003843747.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|307690260|ref|ZP_07632706.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|302577971|gb|ADL51983.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 630 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + Y +T+ CI C T C CPV C +G++ I ++CI CG C CPV AIK Sbjct: 574 VRYEITDECIGC--TKCSRACPVRCISGKIKGKHI--IDQEKCIKCGTCFEGCPVKAIK 628 >gi|261379385|ref|ZP_05983958.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria subflava NJ9703] gi|284797832|gb|EFC53179.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria subflava NJ9703] Length = 283 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVAPCPVDCI--DMVPVSQPFL 136 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++T + P A + + ++E++ Sbjct: 137 PSARRFST---------SAEPRFAAAEHAQSRFERH 163 >gi|118474652|ref|YP_892674.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. fetus 82-40] gi|261885445|ref|ZP_06009484.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. venerealis str. Azul-94] gi|118413878|gb|ABK82298.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. fetus 82-40] Length = 184 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPV CFY + + +H ++CI CG C CP A Sbjct: 54 IACQHCTDAPCAQVCPVSCFYIRADGIVLHDKNKCIGCGYCLYACPFGA 102 >gi|119983|sp|P14073|FER_BUTME RecName: Full=Ferredoxin Length = 55 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +T+ CI C C + CPV+ EG + I C DCG C +CPV+AI P+ Sbjct: 1 AYKITDECIACGS--CADQCPVEAISEG-SIYEIDEALCTDCGACADQCPVEAIVPE 54 >gi|218779004|ref|YP_002430322.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760388|gb|ACL02854.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 403 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 V + CI C CVE+CP++ ++ I+ CI CG+C P+C Sbjct: 290 VDADKCIGCNQ--CVEICPMEALSLVDDKAVINHTRCIGCGLCVPKC 334 >gi|114763310|ref|ZP_01442734.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114544108|gb|EAU47118.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 638 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV TE +LC H T C+++CP + +++ P C CG C CP A Sbjct: 251 YVRTEP-LLCAHSRAGQVGCTSCLDLCPTGAISPDGDHVSVDPMICAGCGACSSACPSGA 309 Query: 55 IKPDTEP 61 I D P Sbjct: 310 ISYDAPP 316 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 C LC CV +CP + + L D C+ CG+C CP DAI Sbjct: 492 CTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAI 538 >gi|317484980|ref|ZP_07943864.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] gi|316923785|gb|EFV44987.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] Length = 622 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C HT CV+ CP +G+ ++I P +CI C VC CP +AI+P Sbjct: 572 ERCVNC-HT-CVDTFGCPAFQLRDGK--VSIDPVQCIGCAVCAQVCPNNAIRP 620 >gi|308049209|ref|YP_003912775.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307631399|gb|ADN75701.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 182 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPG 62 +T +C+ C + C+ VCP F ++ L + E C CG+C CP DAI D G Sbjct: 57 LTHSCMHCGNPACLMVCPAGAFTTRDDGLVVLDRERCTSCGLCVSACPYDAIAVDPRDG 115 >gi|255527518|ref|ZP_05394386.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|255508788|gb|EET85160.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] Length = 195 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLEL 65 C C+ C + CPVD ++ + +CI C C CP+ AI P+ + G + Sbjct: 59 QCRQCEDALCAKACPVDAISTKNGYVQVEEGKCIGCKTCTVACPIGAIDMIPEFKDGKRV 118 Query: 66 W---LKINSEYATQ 76 + +K+N E ++Q Sbjct: 119 FQAKIKVNDENSSQ 132 >gi|220932266|ref|YP_002509174.1| electron transport complex, RnfABCDGE type, B subunit [Halothermothrix orenii H 168] gi|219993576|gb|ACL70179.1| electron transport complex, RnfABCDGE type, B subunit [Halothermothrix orenii H 168] Length = 331 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 24/40 (60%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCPVD +N I D+CI+CG+C +CP AI+ Sbjct: 223 CARVCPVDAITIEDNLAVIDYDKCINCGLCAEKCPTGAIE 262 >gi|48675342|dbj|BAD22818.1| ferredoxin1 [Heliobacillus mobilis] Length = 55 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +++ C+ C CV+ CPV +G + I+ D CIDCG C CP AI Sbjct: 1 MAYKISDACVNCGS--CVDACPVGAIEKGSDIYCIN-DTCIDCGSCVDTCPAGAIS 53 >gi|227143|prf||1615261A ferredoxin Length = 55 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + + C+ C C CPVD +G+ I D CIDCG C CPV A Sbjct: 1 AYKILDTCVSCGA--CAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGA 51 >gi|99081333|ref|YP_613487.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99037613|gb|ABF64225.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 247 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 +T+ C LC+H CV CP D + G+ N L I C CG+C CP Sbjct: 185 LTDGCTLCQH--CVWSCPTDAMHLGDTGNTLEIRDQACTGCGLCASACP 231 >gi|150019920|ref|YP_001305274.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosipho melanesiensis BI429] gi|149792441|gb|ABR29889.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosipho melanesiensis BI429] Length = 97 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M ++ +CI CK CV VCPV+ + + F I+ + C CG+C +CP +AI+P+ Sbjct: 1 MPWIRESDCIKCKF--CVNVCPVEGAIIMKEDGFPYINNEICTRCGLCMEKCPKNAIRPN 58 Query: 59 TE 60 E Sbjct: 59 YE 60 >gi|85860769|ref|YP_462971.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85723860|gb|ABC78803.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 132 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 7 ENCILCKHTDCVEVCP--VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E CI C C+EVCP V +G ++ + D CI+CG C CPVDA T PG Sbjct: 43 EKCIGCGM--CLEVCPRTVLSLEKGRARIS-NRDACIECGACSRNCPVDAFAVGTGPGCA 99 Query: 65 LWLKINSEYATQW 77 + INS + Sbjct: 100 TAV-INSMLGRRG 111 >gi|317133838|ref|YP_004089749.1| hydrogenase large subunit domain protein [Ruminococcus albus 7] gi|315450300|gb|ADU23863.1| hydrogenase large subunit domain protein [Ruminococcus albus 7] Length = 478 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C +VCP N +A I +CI+CG C CP AI P Sbjct: 94 YEVTDSCRGCLAHRCEDVCPRGAISFDHNHVAHIDKSKCIECGRCSKVCPYSAITNRVRP 153 >gi|242239680|ref|YP_002987861.1| dimethylsulfoxide reductase, chain B [Dickeya dadantii Ech703] gi|242131737|gb|ACS86039.1| dimethylsulfoxide reductase, chain B [Dickeya dadantii Ech703] Length = 205 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP + +G+NF+ + CI C CE CP A + D Sbjct: 59 FAYYLSVSCNHCSDPACTKVCPTGAMHKQGDNFVVVDESICIGCRYCEMACPYGAPQFDA 118 Query: 60 EPG 62 G Sbjct: 119 AKG 121 >gi|83950408|ref|ZP_00959141.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83838307|gb|EAP77603.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 672 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV TE +LC H T C+++CP + + I P C CG C CP A Sbjct: 284 YVRTEP-LLCAHSRAEQTGCTRCLDLCPTGAITPDGDHVTIDPMVCAGCGACSAACPSGA 342 Query: 55 IKPDTEP 61 I D P Sbjct: 343 ISYDAPP 349 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T+ C LC CV +CP + + L D C+ CG+C CP DAI EP Sbjct: 520 VDTDACTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANICPEDAIT--YEP 575 Query: 62 GLEL 65 L+L Sbjct: 576 RLDL 579 >gi|328951909|ref|YP_004369243.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452233|gb|AEB08062.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 181 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 23/52 (44%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C+ CV VCP Y E + A+ CI C +C CP AI T Sbjct: 63 QCRQCQDAPCVRVCPTGATYRTETYTAVDQARCIGCRLCMMVCPFGAIHVAT 114 >gi|253580083|ref|ZP_04857350.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848602|gb|EES76565.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 303 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E C CK + CPV + L I P+ECI CG C+ +CP A+ P+ + G ++ Sbjct: 180 SEKCRGCKKCQIEKSCPVHVPKLVDGKLYIDPEECIHCGRCKGKCPFGAV-PEYQNGYKI 238 Query: 66 WLKINSEYATQWPNITTKKESL 87 ++ +W + ++L Sbjct: 239 YI------GGRWGKRVSHGQAL 254 >gi|121534846|ref|ZP_01666666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306641|gb|EAX47563.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 118 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + Y +T+NC C C+E CP G++ ++ D C CG CE CP AI +T+ Sbjct: 37 IRYFITKNCKKCDA--CLEHCPEGAVSAGKDGNIVN-DNCTGCGECEAVCPNGAIVRETD 93 Query: 61 PGLELWLKINSEY-ATQWP 78 P + +++S + WP Sbjct: 94 PYRTINREMDSFFGGGAWP 112 >gi|118467237|ref|YP_884190.1| NADPH-ferredoxin reductase fpra [Mycobacterium avium 104] gi|118168524|gb|ABK69421.1| NADPH-ferredoxin reductase fpra [Mycobacterium avium 104] Length = 511 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/28 (53%), Positives = 18/28 (64%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 L I P C+DCG C CPVDAI+ + E Sbjct: 12 LYIDPQACVDCGACVEVCPVDAIRHEDE 39 >gi|251778159|ref|ZP_04821079.1| nitroreductase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082474|gb|EES48364.1| nitroreductase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 273 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 2/113 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V E CI CK C+ CPV E I + CI CG C CP A+ D Sbjct: 1 MFEVNKEKCISCKQ--CINDCPVSDILLIEGKANIKNESCIKCGHCIAICPTKAVSTDDY 58 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 E+ SE++ + N+ + S K +K + EK G+ T Sbjct: 59 NMDEVKEYNKSEFSIEADNLLNFIKFRRSVRKFKDIKVEKEKISKIIEAGRFT 111 >gi|167761070|ref|ZP_02433197.1| hypothetical protein CLOSCI_03468 [Clostridium scindens ATCC 35704] gi|167661304|gb|EDS05434.1| hypothetical protein CLOSCI_03468 [Clostridium scindens ATCC 35704] Length = 159 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C+ C+EVCPV + E + + I+PD+CI C +C CP+ I +TE Sbjct: 53 CMQCEEPCCMEVCPVGAIFRDEKDAVIINPDKCIGCKMCMNACPLGNIGFNTE 105 >gi|37521054|ref|NP_924431.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421] gi|35212050|dbj|BAC89426.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421] Length = 75 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +G N+ I CIDCG+C CPV+ AI P+ +P L+ Sbjct: 14 ADCVDACPVSCIDQGPGKNAKGTNWYWIDFATCIDCGICLQVCPVNGAILPEEKPELQ 71 >gi|320104680|ref|YP_004180271.1| cyclic nucleotide-binding protein [Isosphaera pallida ATCC 43644] gi|319751962|gb|ADV63722.1| cyclic nucleotide-binding protein [Isosphaera pallida ATCC 43644] Length = 790 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECP 51 ++V +C C C+ CPVD L I D CI CG C CP Sbjct: 647 FLVASSCRSCLDPTCLPACPVDAINRNGKSLEIRIKDHCIGCGKCAENCP 696 >gi|282857225|ref|ZP_06266469.1| ferredoxin [Pyramidobacter piscolens W5455] gi|282585011|gb|EFB90335.1| ferredoxin [Pyramidobacter piscolens W5455] Length = 279 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T CI C+ CV+VCP I P C++CG+C +CPV AI Sbjct: 214 VCTVGCIGCQM--CVKVCPKQTISMKGALAVIDPSNCVNCGLCAAKCPVHAI 263 >gi|21672444|ref|NP_660511.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008868|sp|Q8K9Y0|NUOI_BUCAP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21623057|gb|AAM67722.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 180 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 21/91 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC E +N F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVDCISLQKSEKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESL 87 P EL S++ Q N+ +KE L Sbjct: 116 --LMPDFEL-----SDFNRQ--NLVYEKEDL 137 >gi|161870852|ref|YP_001600026.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis 053442] gi|161596405|gb|ABX74065.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis 053442] Length = 279 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ VCP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRVCPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|329914674|ref|ZP_08276144.1| Iron-sulfur cluster-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327545089|gb|EGF30386.1| Iron-sulfur cluster-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 547 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 14/63 (22%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK------ 56 LC H T C++VC D N + + P+ C+ CG C CP A+ Sbjct: 160 LCAHGRNGQIGCTSCIDVCSADAIRHDGNLVKVVPNLCVGCGACTTVCPSGALTYAYPRA 219 Query: 57 PDT 59 PDT Sbjct: 220 PDT 222 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 T C LC CV CP + + L C+ CG+CE CP +AI Sbjct: 412 TSACTLC--MSCVGACPESALMDNADLPQLRFVEKNCVQCGLCETTCPENAI 461 >gi|78189918|ref|YP_380256.1| Fe-S-cluster-containing hydrogenase components 1-like [Chlorobium chlorochromatii CaD3] gi|78172117|gb|ABB29213.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chlorobium chlorochromatii CaD3] Length = 517 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C CV++CPV+ ++ E+ + CI C C CP A+ D E Sbjct: 51 YFTVLRCNHCAEPPCVDICPVEALHKREDGIVDFDKRRCIGCKACAQACPYGALYIDPE 109 >gi|220931476|ref|YP_002508384.1| NADH dehydrogenase (ubiquinone) 51 kDa subunit [Halothermothrix orenii H 168] gi|219992786|gb|ACL69389.1| NADH dehydrogenase (ubiquinone) 51 kDa subunit [Halothermothrix orenii H 168] Length = 594 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C C C +VCPVD + E I D+CI CG C +CP +A++ Sbjct: 541 IIAEECRNCGL--CAKVCPVDAITKEEEAHVIDLDKCIKCGSCLDKCPFNAVQ 591 >gi|307243639|ref|ZP_07525782.1| 4Fe-4S binding domain protein [Peptostreptococcus stomatis DSM 17678] gi|306493008|gb|EFM65018.1| 4Fe-4S binding domain protein [Peptostreptococcus stomatis DSM 17678] Length = 516 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y T+ C C CVEVCP G++F I D CI CG C+ CP DAI Sbjct: 115 VYKTTDICRGCLARPCVEVCPKKAVSMVNGKSF--IDQDLCIKCGRCKAVCPYDAIAKLE 172 Query: 60 EP 61 P Sbjct: 173 RP 174 >gi|218782352|ref|YP_002433670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763736|gb|ACL06202.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 287 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ +CI C CVEVCP+ GE I CI CG+C CP DA++ Sbjct: 217 VSGDCIAC--GKCVEVCPMHAIVLGEEKAEIQ-GRCIGCGLCASNCPTDAME 265 >gi|78355772|ref|YP_387221.1| hydrogenase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218177|gb|ABB37526.1| hydrogenase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 483 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y T C C CV+ CP D + I PD+C+ CG C CP AI Sbjct: 112 YEATSACRGCLAEACVQHCPKDAVRIVDGKSRIDPDKCVQCGKCMNVCPYHAI 164 >gi|13541825|ref|NP_111513.1| ferredoxin subunit of tungsten formylmethanofuran dehydrogenase [Thermoplasma volcanium GSS1] gi|14325262|dbj|BAB60166.1| ferredoxin [Thermoplasma volcanium GSS1] Length = 70 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CV +CP D + E + IH ++CI+CG C CP AI + G Sbjct: 23 CVGMCPTDAIWLDETVIKIHEEKCIECGFCIVGCPTGAINAEWFHG 68 >gi|310777929|ref|YP_003966262.1| dihydroorotate dehydrogenase family protein [Ilyobacter polytropus DSM 2926] gi|309747252|gb|ADO81914.1| dihydroorotate dehydrogenase family protein [Ilyobacter polytropus DSM 2926] Length = 366 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 V E CI C C ++CP + EN LA I D+C CGVC +CP DA+ Sbjct: 312 VSKEKCIGC--GICADLCPYHAIHINENKLAVIDADKCFGCGVCVSKCPKDAM 362 >gi|149915672|ref|ZP_01904198.1| iron-sulfur cluster-binding protein, putative [Roseobacter sp. AzwK-3b] gi|149810564|gb|EDM70407.1| iron-sulfur cluster-binding protein, putative [Roseobacter sp. AzwK-3b] Length = 632 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T+ C LC CV +CP E + L D C+ CG+C CP DAI EP Sbjct: 479 VDTDACTLC--LSCVSLCPSGALLENPDKPQLRFQEDACLQCGLCANVCPEDAIT--YEP 534 Query: 62 GLEL 65 L L Sbjct: 535 RLNL 538 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 14/70 (20%) Query: 3 YVVTENCILCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP--- 51 YV E +LC H+ +C+++CP + I P C CG C CP Sbjct: 241 YVAMEP-LLCAHSRAGKVGCSNCLDICPTGAIIPAGEHVTIDPMICAGCGACAARCPSGA 299 Query: 52 --VDAIKPDT 59 DA PDT Sbjct: 300 ITYDAPSPDT 309 >gi|308051285|ref|YP_003914851.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] gi|307633475|gb|ADN77777.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C++VCPV+ F + E+ + +H E CI CG C CP A Sbjct: 53 ISVACMHCSDAPCMKVCPVNVFSKTEDGIVLHDKERCIGCGYCLYACPFGA 103 >gi|222055574|ref|YP_002537936.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221564863|gb|ACM20835.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 95 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG----- 62 CI C C+EVCP F + + D C++CG C+ CP DAI+ D G Sbjct: 20 CIGCGR--CLEVCPHQVFTLADKRARMADRDTCMECGACQRNCPADAIRVDAGVGCASGI 77 Query: 63 LELWLK 68 + WLK Sbjct: 78 INEWLK 83 >gi|299141262|ref|ZP_07034399.1| hypothetical protein HMPREF0665_00832 [Prevotella oris C735] gi|298577222|gb|EFI49091.1| hypothetical protein HMPREF0665_00832 [Prevotella oris C735] Length = 56 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CP EG+ + +I+P+ C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPAGAISEGDIY-SINPEACTECGTCADVCPNEAIS 53 >gi|150015217|ref|YP_001307471.1| ferredoxin hydrogenase [Clostridium beijerinckii NCIMB 8052] gi|149901682|gb|ABR32515.1| Ferredoxin hydrogenase [Clostridium beijerinckii NCIMB 8052] Length = 496 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C C + I PD+C +CG+C+ CP DA+ D P Sbjct: 104 FQVTDACRNCIAHKCQSACNFGAITYVDGRAYIDPDKCKECGMCKKACPYDAVAEDMRP 162 >gi|149908810|ref|ZP_01897470.1| hypothetical iron-sulfur cluster-binding protein [Moritella sp. PE36] gi|149808084|gb|EDM68025.1| hypothetical iron-sulfur cluster-binding protein [Moritella sp. PE36] Length = 566 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 10/63 (15%) Query: 6 TENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP---- 57 T++C LC CV VCP + G L +C+ CG+CE CP V +KP Sbjct: 431 TDDCTLC--MGCVAVCPTRALHAVGGRPGLQFKEQDCVQCGLCEKACPEQVLTLKPGVNW 488 Query: 58 DTE 60 DTE Sbjct: 489 DTE 491 >gi|225076878|ref|ZP_03720077.1| hypothetical protein NEIFLAOT_01929 [Neisseria flavescens NRL30031/H210] gi|224951764|gb|EEG32973.1| hypothetical protein NEIFLAOT_01929 [Neisseria flavescens NRL30031/H210] Length = 283 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQPFL 136 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++T + P A + + ++E++ Sbjct: 137 PSARRFST---------SAEPRFAAAEHAQNRFERH 163 >gi|171059653|ref|YP_001792002.1| RnfABCDGE type electron transport complex subunit B [Leptothrix cholodnii SP-6] gi|170777098|gb|ACB35237.1| electron transport complex, RnfABCDGE type, B subunit [Leptothrix cholodnii SP-6] Length = 224 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD-TEPGLELW 66 CI C T C++ CPVDC G + ++ +C C +C P CPVD I+ + PG W Sbjct: 89 CIGC--TLCIKACPVDCIVGGHKRMHSVIEADCTGCELCLPACPVDCIQVEVVTPGASGW 146 >gi|82702149|ref|YP_411715.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] gi|110287762|sp|Q2YA98|NUOI1_NITMU RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|82410214|gb|ABB74323.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] Length = 171 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E E+ F I+ CI CG CE CP DAI+ Sbjct: 49 ERCVACYL--CAAACPVDCIALQATEDEHERRYPEFFRINFSRCIFCGFCEEACPTDAIQ 106 Query: 57 --PDTEPG 62 PD E G Sbjct: 107 LTPDFEMG 114 >gi|301310929|ref|ZP_07216858.1| NADH dehydrogenase I, F subunit [Bacteroides sp. 20_3] gi|300830992|gb|EFK61633.1| NADH dehydrogenase I, F subunit [Bacteroides sp. 20_3] Length = 780 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++T++C+ C T C + CP D Y +I ++C+ CG+C EC DAI+ Sbjct: 723 MITDDCVGC--TKCSKACPSDAIPYTPYEKHSIDIEKCVLCGLCIDECSFDAIR 774 >gi|282900139|ref|ZP_06308096.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] gi|281195021|gb|EFA69961.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] Length = 75 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C +EG ++ I CIDCG+C CPV+ AI P P L+ Sbjct: 14 ADCVDACPVACIHEGPGKNIKGTDWYWIDFTTCIDCGICLQVCPVEGAIVPQERPELQ 71 >gi|255527286|ref|ZP_05394166.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296188356|ref|ZP_06856748.1| ferredoxin [Clostridium carboxidivorans P7] gi|255509024|gb|EET85384.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296047482|gb|EFG86924.1| ferredoxin [Clostridium carboxidivorans P7] Length = 56 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + ++C+ C C CPV+ +G++ I CIDCG C CPV A Sbjct: 1 MAYKIEDSCVSCGT--CASECPVNAISQGDSIFVIDESTCIDCGNCANVCPVGA 52 >gi|219852666|ref|YP_002467098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219546925|gb|ACL17375.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 368 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + CI C+ C+ VCP E I D CI C C CP AI D E + Sbjct: 190 VVRDLCIGCQ--TCLPVCPQQAIGMDEGAALISKDRCIGCFECMTVCPERAIDVDWETDI 247 Query: 64 ELWLKINSEYA 74 + + EYA Sbjct: 248 PTFTERMVEYA 258 >gi|56750734|ref|YP_171435.1| ferredoxin-like protein [Synechococcus elongatus PCC 6301] gi|81299625|ref|YP_399833.1| ferredoxin-like protein [Synechococcus elongatus PCC 7942] gi|56685693|dbj|BAD78915.1| ferredoxin-like protein [Synechococcus elongatus PCC 6301] gi|81168506|gb|ABB56846.1| ferredoxin-like protein [Synechococcus elongatus PCC 7942] Length = 74 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 8/57 (14%) Query: 16 DCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C EG + I CIDCG+C CPV+ AI P+ P L+ Sbjct: 15 DCVDACPVACIQEGPGRNQKGTTWYWIDFSTCIDCGICLQVCPVEGAILPEERPELQ 71 >gi|291561240|emb|CBL40039.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 490 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +VVT+NC C C C G + I P C +CG C CP +AI P Sbjct: 94 FVVTDNCQKCMGKACQNACNFGAISIGRDRAHIDPSVCKECGRCAQSCPYNAIAELIRP 152 >gi|224373083|ref|YP_002607455.1| iron-sulfur cluster-binding protein CooF [Nautilia profundicola AmH] gi|223589422|gb|ACM93158.1| iron-sulfur cluster-binding protein CooF [Nautilia profundicola AmH] Length = 172 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ CV CP+D N++ I+ D+CI C C CP AI Sbjct: 63 CMQCEDAPCVNACPIDIIKYENNYVKIYEDDCIGCRSCAMVCPFGAI 109 >gi|218440077|ref|YP_002378406.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] gi|218172805|gb|ACK71538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] Length = 74 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV+ CPV C + +G ++ I CIDCG+C CPV+ AI Sbjct: 5 IVTETCE--GVADCVDACPVACIHPGPGKNMKGTDWYWIDFTTCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P+ P L+ Sbjct: 63 VPEERPDLQ 71 >gi|188585138|ref|YP_001916683.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349825|gb|ACB84095.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 268 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 24/44 (54%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C +VCPVD N I EC++CG C+ +CP D I D E Sbjct: 220 CAKVCPVDAITIENNLAYIDSHECVNCGKCKEKCPRDCITSDLE 263 >gi|110834471|ref|YP_693330.1| electron transport complex protein RnfB [Alcanivorax borkumensis SK2] gi|122959433|sp|Q0VP40|RNFB_ALCBS RecName: Full=Electron transport complex protein rnfB; AltName: Full=Nitrogen fixation protein rnfB gi|110647582|emb|CAL17058.1| electron transport complex protein rnfB, putative [Alcanivorax borkumensis SK2] Length = 194 Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKP-D 58 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I + Sbjct: 108 VAYIREDECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVEPCPVDCIDMLE 165 Query: 59 TEPGLELW 66 +P L+ W Sbjct: 166 VKPTLQTW 173 >gi|317125936|ref|YP_004100048.1| polysulphide reductase NrfD [Intrasporangium calvum DSM 43043] gi|315590024|gb|ADU49321.1| Polysulphide reductase NrfD [Intrasporangium calvum DSM 43043] Length = 508 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV++CP ++ ++ + D CI C C CP DAI D Sbjct: 57 CNHCTDAPCVKICPTQALFKRDDGIVDFDGDRCIGCKSCMQACPYDAIYID 107 >gi|209694971|ref|YP_002262900.1| formate dehydrogenase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] gi|208008923|emb|CAQ79139.1| formate dehydrogenase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] Length = 202 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C+ VCP DCF E+ + H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVRHNKDLCIGCGYCLFACPFGA 103 >gi|34558205|ref|NP_908020.1| ferredoxin [Wolinella succinogenes DSM 1740] gi|34483924|emb|CAE10920.1| FERREDOXIN [Wolinella succinogenes] Length = 83 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++TE CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLMITEECIACDA--CREECPNEAIDEGDPTYMIDPDRCTECVGYYDEPSCVGACPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 >gi|87124438|ref|ZP_01080287.1| ferredoxin [Synechococcus sp. RS9917] gi|86168010|gb|EAQ69268.1| ferredoxin [Synechococcus sp. RS9917] Length = 74 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVDA 54 DCV+ CPV C +G F I D CIDCG+C CPVD Sbjct: 14 ADCVDACPVACIQPGRGRNKKGTEFYWIDFDTCIDCGICLQVCPVDG 60 >gi|212634958|ref|YP_002311483.1| Fe-S-cluster-containing hydrogenase components 1 [Shewanella piezotolerans WP3] gi|212556442|gb|ACJ28896.1| Fe-S-cluster-containing hydrogenase components 1 [Shewanella piezotolerans WP3] Length = 231 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 T V C C + CV+VCP + Y+ E + I DECI C +C CP A + D Sbjct: 81 TLAVPNQCNQCDNPPCVDVCPAEATYKREEDGIVVIDHDECIHCQLCVDACPYGARRKD 139 >gi|158520317|ref|YP_001528187.1| iron-sulfur cluster-binding protein [Desulfococcus oleovorans Hxd3] gi|158509143|gb|ABW66110.1| iron-sulfur cluster-binding protein [Desulfococcus oleovorans Hxd3] Length = 328 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+ C++ C ++CP Y+ +N +AI PD C+ C+ CP P+ + G+ Sbjct: 124 IPRRCMHCENPPCSKLCPFGAAYQQDNGIVAISPDICMGGAKCKAVCPWHI--PERQSGV 181 Query: 64 ELWLKINSEYA 74 L L + +YA Sbjct: 182 GLHLNLMPQYA 192 >gi|282896688|ref|ZP_06304696.1| 4Fe-4S ferredoxin, iron-sulfur binding [Raphidiopsis brookii D9] gi|281198406|gb|EFA73294.1| 4Fe-4S ferredoxin, iron-sulfur binding [Raphidiopsis brookii D9] Length = 75 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV CPV C +EG ++ I CIDCG+C CPV+ AI Sbjct: 5 IVTEICQ--GVADCVAACPVACIHEGPGKNIQGTDWYWIDFTTCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 P P L+ Sbjct: 63 VPQERPELQ 71 >gi|237712153|ref|ZP_04542634.1| F420H2:quinone oxidoreductase [Bacteroides sp. 9_1_42FAA] gi|229453474|gb|EEO59195.1| F420H2:quinone oxidoreductase [Bacteroides sp. 9_1_42FAA] Length = 407 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 12 CKHTDCVEVCPVDC---FYEGENFL--AIHPDECIDCGVCEPECP 51 C + CV+ CP C + + E FL + ++CIDCG+CE CP Sbjct: 11 CGCSSCVQKCPKKCISMYEDDEGFLYPVVDKEKCIDCGLCEIVCP 55 >gi|158520457|ref|YP_001528327.1| thiamine pyrophosphate binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509283|gb|ABW66250.1| thiamine pyrophosphate protein domain protein TPP-binding [Desulfococcus oleovorans Hxd3] Length = 620 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 12 CK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CK H DC+ FY + + I+P+ C C VC CP AI P Sbjct: 568 CKNHRDCINTLACPAFYVADGRVQINPNLCAGCAVCVQVCPEKAIVP 614 >gi|16081628|ref|NP_393993.1| ferredoxin 2[4Fe-4S] related protin [Thermoplasma acidophilum DSM 1728] gi|13124198|sp|P82853|FER2_THEAC RecName: Full=Probable ferredoxin TA0517 gi|10639685|emb|CAC11657.1| ferredoxin 2[4Fe-4S] related protin [Thermoplasma acidophilum] Length = 70 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CV +CP D + E + IH ++CI+CG C CP AI + G Sbjct: 23 CVGMCPTDAIWLDETVIKIHEEKCIECGFCIVGCPTGAITAEWFHG 68 >gi|126734228|ref|ZP_01749975.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126717094|gb|EBA13958.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 643 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Query: 10 ILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +LC H T+C+++CP + ++I P C CG C CP AI D P Sbjct: 263 LLCAHSRAGQTGCTNCLDLCPTGAISPEGDHVSIDPMICAGCGACSAGCPSGAISYDAPP 322 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T++C LC CV +CP + + L D C+ CG+C CP DAI Sbjct: 491 VNTDSCTLC--LSCVSLCPSGALGDNPDKPQLRFQEDACLQCGLCVQICPEDAI 542 >gi|308051289|ref|YP_003914855.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] gi|307633479|gb|ADN77781.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ C+ C C++VCPV+ F + E+ + +H E CI CG C CP A Sbjct: 53 ISVACMHCADAPCMKVCPVNVFSKTEDGIVLHDKERCIGCGYCLYACPFGA 103 >gi|254423403|ref|ZP_05037121.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] gi|196190892|gb|EDX85856.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] Length = 533 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 18/23 (78%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C VC+P CP DAIKP++E Sbjct: 7 ENCIACDVCQPLCPQDAIKPNSE 29 >gi|109947128|ref|YP_664356.1| hypothetical protein Hac_0535 [Helicobacter acinonychis str. Sheeba] gi|109714349|emb|CAJ99357.1| fdx [Helicobacter acinonychis str. Sheeba] Length = 83 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 11/80 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYYDEPSCVSVCPVDA 58 Query: 55 IKPD---TEPGLELWLKINS 71 I PD TE EL K S Sbjct: 59 ILPDPNNTESIEELKYKYES 78 >gi|304413378|ref|ZP_07394851.1| NADH:ubiquinone oxidoreductase, chain I [Candidatus Regiella insecticola LSR1] gi|304284221|gb|EFL92614.1| NADH:ubiquinone oxidoreductase, chain I [Candidatus Regiella insecticola LSR1] Length = 183 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 61 ERCVACNL--CAAVCPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTLAIQ 118 Query: 57 --PDTEPG 62 PD E G Sbjct: 119 LTPDFEMG 126 >gi|260592587|ref|ZP_05858045.1| conserved domain protein [Prevotella veroralis F0319] gi|260535357|gb|EEX17974.1| conserved domain protein [Prevotella veroralis F0319] Length = 56 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CPV+ EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPVEAISEGDIY-KIDADACTECGTCASVCPNEAIS 53 >gi|255655479|ref|ZP_05400888.1| putative iron-sulfur protein [Clostridium difficile QCD-23m63] gi|296451471|ref|ZP_06893208.1| probable iron-sulfur protein [Clostridium difficile NAP08] gi|296880180|ref|ZP_06904146.1| probable iron-sulfur protein [Clostridium difficile NAP07] gi|296259738|gb|EFH06596.1| probable iron-sulfur protein [Clostridium difficile NAP08] gi|296428769|gb|EFH14650.1| probable iron-sulfur protein [Clostridium difficile NAP07] Length = 424 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAI 55 E+C+ C C+ CP+D +G+ ++ I D C+ CGVC C ++I Sbjct: 293 ESCVKCGK--CIAACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSI 343 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G E ++KI+ + Sbjct: 290 INHESCVKCGKCIAACPIDAISKVKEDGKE-YIKIDED 326 >gi|152991554|ref|YP_001357276.1| ferredoxin-like protein [Nitratiruptor sp. SB155-2] gi|151423415|dbj|BAF70919.1| ferredoxin-like protein [Nitratiruptor sp. SB155-2] Length = 346 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 + +NC C+ DCV+ CP + + AI CIDC +C C VDA+K + Sbjct: 232 IDQNCTNCR--DCVQFCPTGALFYAKEGTAIWFMSGRCIDCDICNDICKVDAVKNKEQID 289 Query: 63 LELW 66 + W Sbjct: 290 IVSW 293 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 26/41 (63%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T+C+++CP + F+ L++ +C +CGVC CP +A+ Sbjct: 28 TECMDICPKEAFFFDRGRLSLDAQKCTNCGVCLGVCPSEAL 68 >gi|319638998|ref|ZP_07993756.1| ferredoxin [Neisseria mucosa C102] gi|317399902|gb|EFV80565.1| ferredoxin [Neisseria mucosa C102] Length = 282 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 80 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQPFL 135 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++T + P A + + ++E++ Sbjct: 136 PSARRFST---------SAEPRFAAAEHAQSRFERH 162 >gi|306835751|ref|ZP_07468755.1| 4Fe-4S ferredoxin [Corynebacterium accolens ATCC 49726] gi|304568382|gb|EFM43943.1| 4Fe-4S ferredoxin [Corynebacterium accolens ATCC 49726] Length = 352 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C H C++VCP + E + + D C CG C CP I+ + G+ L Sbjct: 125 CKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVSL 182 >gi|167625914|ref|YP_001676208.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355936|gb|ABZ78549.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 231 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 T V C C + CV VCPV+ Y+ + + I+ DECI C +C CP A + D Sbjct: 81 TLAVPNQCNQCDNPACVYVCPVEATYKRKEDGIVVINHDECIHCQLCVDACPYGARRKD 139 >gi|119989|sp|P00196|FER_CLOBU RecName: Full=Ferredoxin Length = 55 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A Sbjct: 1 AFVINDSCVSCGA--CAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGA 51 >gi|257790263|ref|YP_003180869.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830362|ref|ZP_08163819.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|257474160|gb|ACV54480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487829|gb|EGC90267.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 394 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C +VC C +N L I P+ CI CG C CP A++ Sbjct: 39 CADVCTSGCISYDDNELVIEPERCIGCGTCATVCPTCALE 78 >gi|313906031|ref|ZP_07839384.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eubacterium cellulosolvens 6] gi|313469144|gb|EFR64493.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eubacterium cellulosolvens 6] Length = 601 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI------ 55 +V + C+ CK C+++ CP +G++ I P++C+ CGVC+ C +DAI Sbjct: 526 HVEEDKCVGCK--SCMKIGCPSLSMKDGKS--VIDPNQCVGCGVCQQMCKLDAILDSDNN 581 Query: 56 -KPDTEPGLELW 66 PG+ W Sbjct: 582 PHASIRPGISRW 593 >gi|298676082|ref|YP_003727832.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298289070|gb|ADI75036.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalobium evestigatum Z-7303] Length = 58 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +++ENC+ C CV+ CPV+ +GEN + EC DCG C CP +AI+ Sbjct: 2 VAVIISENCVGCAT--CVDECPVEAISLDGENIAVVDEGECSDCGECVDVCPTEAIE 56 >gi|300087166|ref|YP_003757688.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526899|gb|ADJ25367.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 275 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIK 56 + V++ C+ C H CV VCPV + EN + + +CI C C+ CP D K Sbjct: 68 HFVSKRCMHCIHPACVSVCPVGALQKLENGRVVWEEGKCIGCRYCQNACPFDIPK 122 >gi|237736591|ref|ZP_04567072.1| hydrogenase [Fusobacterium mortiferum ATCC 9817] gi|229420453|gb|EEO35500.1| hydrogenase [Fusobacterium mortiferum ATCC 9817] Length = 642 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C VCPV C +G+ I D C CG C CPV AI Sbjct: 215 LKFRITEKCIGC--TACARVCPVKCI-DGKLKEKHTIDTDRCTHCGQCVAACPVGAI 268 >gi|120009|sp|P00201|FER_MEGEL RecName: Full=Ferredoxin gi|229468|prf||732190A ferredoxin Length = 54 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+++ C+ C C CP EGE + D CIDCG CE CP AI + Sbjct: 2 HVISDECVKCGA--CASTCPTGAIEEGETKYVV-TDSCIDCGACEAVCPTGAISAE 54 >gi|323701313|ref|ZP_08112988.1| nitrite and sulphite reductase 4Fe-4S region [Desulfotomaculum nigrificans DSM 574] gi|323533915|gb|EGB23779.1| nitrite and sulphite reductase 4Fe-4S region [Desulfotomaculum nigrificans DSM 574] Length = 232 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C +C CV CP DC GE I C++CG C +CP AIK Sbjct: 94 IGAGCTMCGL--CVAACPDDCIVLGEAGPIIDRQVCLNCGKCAAKCPTGAIK 143 >gi|126699794|ref|YP_001088691.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile 630] gi|115251231|emb|CAJ69062.1| putative oxidoreductase, Fe-S subunit [Clostridium difficile] Length = 140 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C+ VCP +CF + E F+ + CI C +CE C A+ Sbjct: 55 CIHCNEPKCLGVCPKNCFKKEEGFIVLDNQNCIGCKLCEKACEYGAL 101 >gi|193084380|gb|ACF10036.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 483 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + DE CI C C CP DA+ D G Sbjct: 71 CNHCEDSPCTTICPTTALFTREDGIVDFDDERCIGCKSCMQACPYDALYIDPNKG 125 >gi|78043167|ref|YP_360674.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77995282|gb|ABB14181.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 213 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C CV+VCPV Y+ EN +AI D CI C C CP A D Sbjct: 61 CMQCDRPACVQVCPVKATYKMENGIVAIDYDRCIGCRYCVVSCPYGARSFD 111 >gi|15611332|ref|NP_222983.1| ferredoxin [Helicobacter pylori J99] gi|4154783|gb|AAD05841.1| Ferredoxin [Helicobacter pylori J99] gi|307636971|gb|ADN79421.1| 4Fe-4S ferredoxin [Helicobacter pylori 908] gi|317013722|gb|ADU81158.1| ferredoxin [Helicobacter pylori Gambia94/24] gi|325995562|gb|ADZ50967.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Helicobacter pylori 2018] gi|325997158|gb|ADZ49366.1| 4Fe-4S ferredoxin/ iron-sulfur binding protein [Helicobacter pylori 2017] Length = 84 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 9/65 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ +I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYSIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD 58 AI PD Sbjct: 59 AILPD 63 >gi|227501590|ref|ZP_03931639.1| possible formate dehydrogenase beta subunit [Corynebacterium accolens ATCC 49725] gi|227077615|gb|EEI15578.1| possible formate dehydrogenase beta subunit [Corynebacterium accolens ATCC 49725] Length = 352 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C H C++VCP + E + + D C CG C CP I+ + G+ L Sbjct: 125 CKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVSL 182 >gi|254488903|ref|ZP_05102108.1| iron-sulfur cluster-binding protein [Roseobacter sp. GAI101] gi|214045772|gb|EEB86410.1| iron-sulfur cluster-binding protein [Roseobacter sp. GAI101] Length = 650 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ +C+++CP +AI P C CG C CP AI D P Sbjct: 268 LCAHSRAEQAACSNCLDLCPTGAITSAGEHVAIDPLICAGCGSCSAVCPSGAITYDAPPV 327 Query: 63 LELWLKINSEYAT 75 L+ ++++ +T Sbjct: 328 DTLFRRLSTLAST 340 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP AI Sbjct: 497 VDTDACTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANICPEQAI 548 >gi|139437063|ref|ZP_01771223.1| Hypothetical protein COLAER_00198 [Collinsella aerofaciens ATCC 25986] gi|133776710|gb|EBA40530.1| Hypothetical protein COLAER_00198 [Collinsella aerofaciens ATCC 25986] Length = 205 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C EVCPV+ + + + ECI C +C CP AI PD Sbjct: 51 CHHCEGAPCAEVCPVNAIEHDGDRIHVKEQECIGCRLCAIACPFGAIHPD 100 >gi|150018760|ref|YP_001311014.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] gi|149905225|gb|ABR36058.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] Length = 271 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 17 CVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECP---VDAIKPDTEPGLEL 65 C VCP EN +AIHPD CI CG C CP +D IK L+L Sbjct: 17 CSNVCPSGVLSMNENGPIAIHPDNCISCGHCVAICPSSSIDNIKTPLSNQLDL 69 >gi|256810436|ref|YP_003127805.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793636|gb|ACV24305.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 82 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LCK +C E CP++ F EG+ + P++C CGVCE CP A+K + E Sbjct: 29 LCKGAECAECANNCPMEVFEIEGDKVVVARPEDCSYCGVCEDVCPTGAVKVEPE 82 >gi|307130319|ref|YP_003882335.1| hydrogenase 4, 4Fe-4S subunit [Dickeya dadantii 3937] gi|306527848|gb|ADM97778.1| hydrogenase 4, 4Fe-4S subunit [Dickeya dadantii 3937] Length = 208 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +LC+H + C VCPV+ +N + + + CI C +C CP AI P Sbjct: 49 VLCRHCEDAPCARVCPVNAIRHQDNAVLLDENTCIGCKLCAIACPFGAITPS 100 >gi|255654945|ref|ZP_05400354.1| iron-dependent hydrogenase [Clostridium difficile QCD-23m63] gi|296449691|ref|ZP_06891461.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296877992|ref|ZP_06902011.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] gi|296261415|gb|EFH08240.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296431060|gb|EFH16888.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] Length = 498 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP N + IH D CI+CG C CP AI K P + K + Sbjct: 166 CKSVCPTGALDFNRNTMKAMIHEDNCINCGACMSACPFGAISDKSLIAPVAKKLAKKENM 225 Query: 73 YATQWPNITTKKES 86 YA P IT + +S Sbjct: 226 YAIVAPAITGQIDS 239 >gi|20089624|ref|NP_615699.1| hypothetical protein MA0739 [Methanosarcina acetivorans C2A] gi|19914545|gb|AAM04179.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 219 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +TE C C C E+CP +GE + I C++CG C CP DAI+P Sbjct: 164 YKITEKCTAC--GICKELCPSRAISKGEIY-KIDGSICLECGRCAENCPYDAIEP 215 >gi|322832975|ref|YP_004213002.1| glutamate synthase, small subunit [Rahnella sp. Y9602] gi|321168176|gb|ADW73875.1| glutamate synthase, small subunit [Rahnella sp. Y9602] Length = 659 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCP + F + + + + CI C C CP AI Sbjct: 55 CRQCEDAPCLQVCPTNAFVRRNDSIQLLEERCIGCKTCAVACPFGAI 101 >gi|259416891|ref|ZP_05740811.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] gi|259348330|gb|EEW60107.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] Length = 192 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP--VDAIKP 57 ++E C LC+H C+ CP D + GE + L I C CG+C CP V AI P Sbjct: 130 ISEGCTLCQH--CIWSCPSDAIHLGEQGDTLEIRDRHCTGCGLCASACPERVLAILP 184 >gi|126698471|ref|YP_001087368.1| iron-dependent hydrogenase [Clostridium difficile 630] gi|255100006|ref|ZP_05328983.1| iron-dependent hydrogenase [Clostridium difficile QCD-63q42] gi|255305893|ref|ZP_05350065.1| iron-dependent hydrogenase [Clostridium difficile ATCC 43255] gi|115249908|emb|CAJ67727.1| putative iron-dependent hydrogenase [Clostridium difficile] Length = 498 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP N + IH D CI+CG C CP AI K P + K + Sbjct: 166 CKSVCPTGALDFNRNTMKAMIHEDNCINCGACMSACPFGAISDKSLIAPVAKKLAKKENM 225 Query: 73 YATQWPNITTKKES 86 YA P IT + +S Sbjct: 226 YAIVAPAITGQIDS 239 >gi|325505030|dbj|BAJ83592.1| putative selenate reductase subunit B [Bacillus selenatarsenatis] Length = 292 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C+ C+H C +VCP+ Y+ E+ +AI D+CI C C CP A Sbjct: 138 CMQCEHPPCTKVCPIGATYKSEDGIVAIDYDKCIGCRYCITACPYGA 184 >gi|309379085|emb|CBX22216.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 279 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRSCPADAIMGAGKFMHTVIADECTGCGLCVAPCPVDCI 124 >gi|296126619|ref|YP_003633871.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] gi|296018435|gb|ADG71672.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] Length = 315 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 13/97 (13%) Query: 11 LCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C H + CV+ CPV Y E ++C+ C C CPVDAI T L W ++ Sbjct: 199 ICTHCNLCVKKCPVHNIYNDEKGDIKFKNKCVMCTSCSFRCPVDAI---TIGILNGW-RV 254 Query: 70 NSEYATQWPNITTKKESLPSAAKMDGV-KQKYEKYFS 105 N Y + P + K K D K+ YE+YF+ Sbjct: 255 NGVYKFENPPVGIK-------TKHDNYCKKAYERYFA 284 >gi|171185525|ref|YP_001794444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934737|gb|ACB39998.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 284 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL---ELWLKINSEY 73 CV+VCP Y F+ P C+ CGVC CP P + E + IN Sbjct: 23 CVDVCPAGALYVEGRFVKAEPSLCVGCGVCMSACPTGVFTAQLGPYISCREGGVCINGLR 82 Query: 74 ATQWPNITTKKESLPSAAKMD 94 A + + K + A+ D Sbjct: 83 AEDYLRLVEKYGEVTVDARCD 103 >gi|257076190|ref|ZP_05570551.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroplasma acidarmanus fer1] Length = 88 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 V TE C +C C++VCP + E EN +++H + C++CG CP A++ Sbjct: 22 VNTEMCKICVDKPCIKVCPAGTYEEDKENGISVHYERCLECGAALYACPFGALQ 75 >gi|152979186|ref|YP_001344815.1| dimethylsulfoxide reductase chain B [Actinobacillus succinogenes 130Z] gi|150840909|gb|ABR74880.1| Dimethylsulfoxide reductase chain B [Actinobacillus succinogenes 130Z] Length = 205 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ E F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSVSCNHCDDPACVKVCPTGAMHKNEEGFVIVNEETCIGCRYCHMACPYDAPQFDA 118 Query: 60 EPG 62 + G Sbjct: 119 KKG 121 >gi|223985317|ref|ZP_03635393.1| hypothetical protein HOLDEFILI_02699 [Holdemania filiformis DSM 12042] gi|223962718|gb|EEF67154.1| hypothetical protein HOLDEFILI_02699 [Holdemania filiformis DSM 12042] Length = 563 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE------- 60 NC C CV VCP + I DECI CG C CP A K ++ Sbjct: 10 NCRNCLR--CVRVCPTKAMTYQNHQPTILEDECILCGKCYAICPHSAKKVHSDGDQVRAW 67 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPS 89 G L L I +A+ WP+ K L + Sbjct: 68 IAQGQPLALSIAPSFASVWPDYPRLKRQLKA 98 >gi|88602166|ref|YP_502344.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88187628|gb|ABD40625.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 102 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI CK C EVCP F G++ + ++ C++CG C CPV AI+ ++ G W Sbjct: 16 RCINCKR--CTEVCPHGVFSAGKSHVNLVYQVRCMECGACALNCPVQAIEVESGVGCA-W 72 Query: 67 LKINS 71 I++ Sbjct: 73 AMISA 77 >gi|188587191|ref|YP_001918736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351878|gb|ACB86148.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 275 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C+ C C+ VCP Y E+ + + D CI C C CP + I D Sbjct: 70 YFSKQGCMHCTDAGCLTVCPTGAIYRTESGTVNVDFDRCIGCNYCAANCPFNVISFDRRT 129 Query: 62 GL 63 + Sbjct: 130 NV 131 >gi|193084277|gb|ACF09936.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote KM3-130-D10] Length = 483 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + DE CI C C CP DA+ D G Sbjct: 71 CNHCEDSPCTTICPTTALFTREDGIVDFDDERCIGCKSCMQACPYDALYIDPNKG 125 >gi|119505634|ref|ZP_01627705.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2080] gi|119458577|gb|EAW39681.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2080] Length = 200 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I D Sbjct: 113 VAYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIADECTGCDLCVEPCPVDCI--DM 168 Query: 60 EP---GLELW 66 P G+E W Sbjct: 169 LPRKGGIEHW 178 >gi|126727358|ref|ZP_01743193.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] gi|126703353|gb|EBA02451.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] Length = 650 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++C+ VCP +AI P C CG C CP AI D P Sbjct: 279 SNCLNVCPTGAIVSAGEHVAIDPMICAGCGACSAVCPSGAISYDAPP 325 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 E+C LC CV +CP + + L D C+ CG+C CP +AI Sbjct: 500 ESCTLC--LSCVSLCPSGALADNPDMPQLRFQEDACLQCGLCSNICPENAI 548 >gi|323700521|ref|ZP_08112433.1| hypothetical protein DND132_3115 [Desulfovibrio sp. ND132] gi|323460453|gb|EGB16318.1| hypothetical protein DND132_3115 [Desulfovibrio desulfuricans ND132] Length = 239 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTE 60 LC H + CV VCPV Y+ EN L + D+C+ CG C CP DA I P T Sbjct: 88 LCNHCEEPACVPVCPVHATYKDENGLVLVDSDKCLACGFCVQACPYDARYINPVTH 143 >gi|329119761|ref|ZP_08248439.1| electron transport complex protein RnfB [Neisseria bacilliformis ATCC BAA-1200] gi|327464124|gb|EGF10431.1| electron transport complex protein RnfB [Neisseria bacilliformis ATCC BAA-1200] Length = 281 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 16/98 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI--KP 57 + ++ CI C T C+ CPVD + + EC CG+C CPVD I +P Sbjct: 76 LAWIDEAACIGC--TACIRACPVDAIMGASKLMHTVIAAECTGCGLCVAPCPVDCIHMRP 133 Query: 58 D-----------TEPGLELWLKINSEYATQWPNITTKK 84 PGL + +W N T+K Sbjct: 134 SENSVLPQACSLAAPGLAPRFAAAAHARARWQNRETRK 171 >gi|315651089|ref|ZP_07904123.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315486679|gb|EFU77027.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 207 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++CI C CVEVCP DC + I C+ CG C C V A+ Sbjct: 154 YFITDDCIGCGR--CVEVCPQDCINQENIPYVIENKHCLHCGNCLTVCSVGAV 204 >gi|313157716|gb|EFR57127.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 384 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 12 CKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C CV+ CP C + E+ + + C+ CG+CE CPV P ++P Sbjct: 11 CGCNACVQKCPQQCIGQSEDAEGFIYPQVDKARCVGCGLCEKVCPVINQNPKSKP 65 >gi|225620406|ref|YP_002721663.1| hypothetical protein BHWA1_01487 [Brachyspira hyodysenteriae WA1] gi|225215225|gb|ACN83959.1| hypothetical ferrotoxin domain protein [Brachyspira hyodysenteriae WA1] Length = 316 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 13/97 (13%) Query: 11 LCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C H + CV+ CPV+ Y E ++C+ C C CPVDAI L W ++ Sbjct: 200 ICTHCNLCVKKCPVNNIYNDEKGNIKFKNKCVMCTSCAFRCPVDAISIGI---LNFW-RV 255 Query: 70 NSEYATQWPNITTKKESLPSAAKMDGV-KQKYEKYFS 105 N Y + P K K D K+ Y++YF+ Sbjct: 256 NGVYKFENPPTGIK-------GKHDNYCKKAYDRYFA 285 >gi|126178175|ref|YP_001046140.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125860969|gb|ABN56158.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoculleus marisnigri JR1] Length = 367 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV E C C C VCP + ++P+ C+ CG C CP AI+ D Sbjct: 188 YVEIERCGGCG--KCTTVCPQAAMTLADGRAVLNPEHCVGCGDCMRACPEGAIEFDWTTE 245 Query: 63 LELWLKINSEYA 74 + +++ EYA Sbjct: 246 IRPFIERLCEYA 257 >gi|317489724|ref|ZP_07948227.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911190|gb|EFV32796.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 394 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C +VC C +N L I P+ CI CG C CP A++ Sbjct: 39 CADVCTSGCISYDDNELVIEPERCIGCGTCATVCPTCALE 78 >gi|300728139|ref|ZP_07061510.1| nitroreductase family protein [Prevotella bryantii B14] gi|299774565|gb|EFI71186.1| nitroreductase family protein [Prevotella bryantii B14] Length = 269 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T+ CI+C C +VCP F + E P+ CIDCG C CP +I+ P Sbjct: 8 TDTCIMCG--KCTQVCPPHIFMQREKKTPIRVFKPERCIDCGHCVDVCPTHSIEHSNIP 64 >gi|227486762|ref|ZP_03917078.1| ferredoxin [Anaerococcus lactolyticus ATCC 51172] gi|227235232|gb|EEI85247.1| ferredoxin [Anaerococcus lactolyticus ATCC 51172] Length = 57 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN CI C C CPV +G+ I + CIDCG C CPV+AI Sbjct: 1 MAYKIDENTCISCGS--CEGECPVGAISQGDAAYEIDANACIDCGSCSAVCPVEAI 54 >gi|167748877|ref|ZP_02421004.1| hypothetical protein ANACAC_03651 [Anaerostipes caccae DSM 14662] gi|317470283|ref|ZP_07929677.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167651847|gb|EDR95976.1| hypothetical protein ANACAC_03651 [Anaerostipes caccae DSM 14662] gi|316902256|gb|EFV24176.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 495 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V C C C+EVCP + + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGGECQGCMAHPCMEVCPKNAISFVDGYSYIDQEKCIKCGQCQKVCPYSAIHERKRP 171 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 19/76 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C +VCP +E + I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CQKVCPYSAIHERKRPCEVACGVGAIETDYAGRATINPDKCVSCG 200 Query: 45 VCEPECPVDAIKPDTE 60 +C CP AI ++ Sbjct: 201 MCMVNCPFGAIADKSQ 216 >gi|328955718|ref|YP_004373051.1| hydrogenase large subunit domain protein [Coriobacterium glomerans PW2] gi|328456042|gb|AEB07236.1| hydrogenase large subunit domain protein [Coriobacterium glomerans PW2] Length = 517 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C E+CP + I D CI+CG C CP AI P Sbjct: 121 YEVTNMCQGCLAHPCREICPTGAVTFVDKKAHIDKDACINCGRCASICPYTAIAHRERP 179 >gi|89092828|ref|ZP_01165780.1| iron-sulfur cluster-binding protein [Oceanospirillum sp. MED92] gi|89082853|gb|EAR62073.1| iron-sulfur cluster-binding protein [Oceanospirillum sp. MED92] Length = 555 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEPGL 63 C LC CV VCP G A++ C+ CG+C+ CP +AI+ +T L Sbjct: 424 CTLC--LSCVAVCPTQALTAGGETPALNFVEQSCVQCGLCDSACPENAIQLETRLSL 478 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T C++VCP D + + I P C G C CP AI Sbjct: 195 TRCLDVCPADAISSINDLVNIDPHMCHGAGGCATACPTGAI 235 >gi|89519313|gb|ABD75790.1| iron-sulfur cluster-binding protein [uncultured bacterium] Length = 380 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV+E CI C C + CPV E I CI C C CP DAI+ Sbjct: 318 VVSEKCIGCGF--CRDACPVQVISMVEKHAEIKQRHCIHCYCCHEMCPHDAIE 368 >gi|317010558|gb|ADU84305.1| ferrodoxin [Helicobacter pylori SouthAfrica7] Length = 83 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYSDEPSCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 >gi|301631489|ref|XP_002944830.1| PREDICTED: hypothetical protein LOC100488392 [Xenopus (Silurana) tropicalis] Length = 1458 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPV-------DCFYEGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP D +G I +CI CG CE CPVD+IK Sbjct: 1218 ERCIACKL--CEAVCPAMAITIESDVRADGSRRTTRYDIDLTKCIFCGFCEESCPVDSIK 1275 >gi|283768793|ref|ZP_06341704.1| 4Fe-4S binding domain protein [Bulleidia extructa W1219] gi|283104579|gb|EFC05952.1| 4Fe-4S binding domain protein [Bulleidia extructa W1219] Length = 288 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 TE CI CK CV CPV+ F +N + + P CI C C +CPV A+ Sbjct: 211 TEKCIGCK--RCVAACPVNMFAYIDNTIQMVREPKHCILCAECYHQCPVKAV 260 >gi|158634530|gb|ABW76117.1| Fe-hydrogenase 2 [Trimastix pyriformis] Length = 292 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C+ CP + I PD C+ CG C+ CP AI T P Sbjct: 115 AYFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGSCQKVCPYHAIVKLTVP 174 >gi|260772822|ref|ZP_05881738.1| iron-sulfur cluster-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611961|gb|EEX37164.1| iron-sulfur cluster-binding protein [Vibrio metschnikovii CIP 69.14] Length = 553 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECP 51 +++C LC CV VCP + + A+H E C+ CG+C CP Sbjct: 417 SQDCTLC--MSCVAVCPTRALHHSGDIPALHFTEQDCVQCGLCVTACP 462 >gi|34557118|ref|NP_906933.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Wolinella succinogenes DSM 1740] gi|34482833|emb|CAE09833.1| MOLYBDOPTERIN OXIDOREDUCTASE, IRON-SULFUR BINDING SUBUNIT [Wolinella succinogenes] Length = 187 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C++ C EVCP + +Y+ F+++ P +CI C C CP DA D Sbjct: 60 IPSQCQHCENAPCQEVCPTNATYYDERGFVSVDPKKCIMCTYCMTACPYDARYVD 114 >gi|218134605|ref|ZP_03463409.1| hypothetical protein BACPEC_02508 [Bacteroides pectinophilus ATCC 43243] gi|217989990|gb|EEC56001.1| hypothetical protein BACPEC_02508 [Bacteroides pectinophilus ATCC 43243] Length = 218 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C CV+ CP C G +I + C+ CG C CPV A+K Sbjct: 156 YHITDACIGCG--TCVQHCPQSCISCVEDAETGNTHFSIRQEHCLHCGACYEHCPVGAVK 213 >gi|187251887|ref|YP_001876369.1| electron transfer flavoprotein subunit alpha [Elusimicrobium minutum Pei191] gi|186972047|gb|ACC99032.1| Electron transfer flavoprotein alpha subunit [Elusimicrobium minutum Pei191] Length = 397 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + NCI C T CV +CP +G+ A+ C CG C PECPV I Sbjct: 4 IGSNCIGC--TKCVRICPFGALSMDGKK--AVVNSACTLCGACIPECPVKCI 51 >gi|11499056|ref|NP_070290.1| iron-sulfur cluster binding protein, putative [Archaeoglobus fulgidus DSM 4304] gi|2649108|gb|AAB89787.1| iron-sulfur cluster binding protein, putative [Archaeoglobus fulgidus DSM 4304] Length = 77 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CI C CVEVCP D F EG + +P++C C +C CPVDAI E L Sbjct: 15 SGCIGCG--TCVEVCPTDVFRLEGGRAVIKYPEDCQICHLCRLYCPVDAITISPEKSL 70 >gi|15679840|ref|NP_276958.1| indolepyruvate oxidoreductase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|6685555|sp|O27880|IORA_METTH RecName: Full=Indolepyruvate oxidoreductase subunit iorA; Short=IOR; AltName: Full=Indolepyruvate ferredoxin oxidoreductase subunit alpha gi|2622988|gb|AAB86318.1| indolepyruvate oxidoreductase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 618 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 7 ENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C LC +C+ CP EGE F I P +C C VC CP AIKP+ Sbjct: 566 EKCDLC--LECIRDLACPAMVTREGEVF--IDPLKCRGCSVCLQICPAGAIKPE 615 >gi|330835620|ref|YP_004410348.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567759|gb|AEB95864.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 405 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Query: 10 ILCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 I C H D C+ CP + + +N + I+ ++CI CG C+ CP +A+ Sbjct: 57 ISCNHCDNPVCLSSCPANAITKDKNGIVKINSEKCIGCGYCQWACPYEAL 106 >gi|323701729|ref|ZP_08113400.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323533265|gb|EGB23133.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 467 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+ C C C CP +N I CI+CG C CP AI T P Sbjct: 93 YVVTDACQNCVAHPCRNSCPKKAISVIQNRAFIDHTVCIECGKCAKACPYHAIIEITRP 151 >gi|294634056|ref|ZP_06712612.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Streptomyces sp. e14] gi|292830052|gb|EFF88405.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Streptomyces sp. e14] Length = 327 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++ C C H C++VCP + E + + D C CG C P CP I E G Sbjct: 145 MASDVCKHCTHAACLDVCPTGALFRTEFGTVVVQEDVCNGCGYCVPACPYGVIDQRKEDG 204 Query: 63 LELW 66 +W Sbjct: 205 -RVW 207 >gi|110680105|ref|YP_683112.1| iron-sulfur cluster-binding protein, putative [Roseobacter denitrificans OCh 114] gi|109456221|gb|ABG32426.1| iron-sulfur cluster-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 651 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C++VCP +AI P C CG C CP AI D P Sbjct: 280 SKCLDVCPTGAITSAGEHVAIDPLICAGCGACSALCPSGAITYDAPP 326 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T+ C LC CV +CP + + L D C+ CG+C CP AI +P Sbjct: 498 VDTDACTLC--LSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAIT--LKP 553 Query: 62 GLEL 65 L+L Sbjct: 554 QLDL 557 >gi|282864084|ref|ZP_06273141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282561162|gb|EFB66707.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 302 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 M ++++ + C C H C++VCP + E + + D C CGVC P CP I+ Sbjct: 109 MRWLMSSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGVCVPACPYGVIE 166 >gi|15679252|ref|NP_276369.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2622353|gb|AAB85730.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 448 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+E+CI C C E+CPVD + + D CI C C CPVDAI T Sbjct: 324 VSEDCISCG--ICSELCPVDAITLRRGSIEVDTDRCILCEKCGIHCPVDAIPRTT 376 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAI 55 V T+ CILC+ C CPVD F I P CI CG+C CP DAI Sbjct: 352 VDTDRCILCEK--CGIHCPVDAIPRTTMKKRSIKGGFTLIDPRLCIGCGLCLDVCPEDAI 409 Query: 56 KPDTEPGL 63 D E GL Sbjct: 410 SRD-ESGL 416 >gi|294085673|ref|YP_003552433.1| DMSO reductase subunit B [Candidatus Puniceispirillum marinum IMCC1322] gi|292665248|gb|ADE40349.1| DMSO reductase chain B [Candidatus Puniceispirillum marinum IMCC1322] Length = 249 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ E + ++PD CI C +C CP A + D G+ Sbjct: 79 RSCLHCEEPACVTVCPTGASYKREEDGIVLVNPDTCIGCKLCSWACPYGAREYDPSHGV 137 >gi|255101316|ref|ZP_05330293.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-63q42] gi|255307192|ref|ZP_05351363.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile ATCC 43255] Length = 140 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C+ VCP +CF + E F+ + CI C +CE C A+ Sbjct: 55 CIHCNEPKCLGVCPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGAL 101 >gi|219852244|ref|YP_002466676.1| nitroreductase [Methanosphaerula palustris E1-9c] gi|219546503|gb|ACL16953.1| nitroreductase [Methanosphaerula palustris E1-9c] Length = 272 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 24/119 (20%) Query: 2 TYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIK- 56 T V+ E NC C + C +CP E ++ +I P+ CI CG CE CP A+K Sbjct: 3 TIVIDETNCTHC--STCATICPSGIIEETDSIPSIRPENEGSCIACGQCEATCPTGALKV 60 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PD +P S P +T P A + ++ ++F P P + T Sbjct: 61 QDPDGQP---------SALPAGRPAMT------PGALGLYLQSRRSVRHFKPEPVPRET 104 >gi|292491704|ref|YP_003527143.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291580299|gb|ADE14756.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 557 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C LC CV VCP +G L C+ CGVC+ CP DAI Sbjct: 433 QTCTLC--LACVSVCPASALLDGGERPQLRFIEANCVQCGVCQAACPEDAI 481 >gi|90418565|ref|ZP_01226477.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90338237|gb|EAS51888.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 576 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V T+ C LC CV CP E+ L+ C+ CG+CE CP I E Sbjct: 416 HVQTDGCTLCHA--CVTACPTGALSASEDRPLLSFSHGACVQCGLCESTCPEQVIT--LE 471 Query: 61 PGLEL 65 P L+ Sbjct: 472 PTLDF 476 >gi|219667285|ref|YP_002457720.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537545|gb|ACL19284.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 228 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 LC H D CV CP Y+ + L +H P++CI C C CP + I +++ W Sbjct: 57 LCNHCDNAACVRACPTKAMYKDDKGLTLHDPNKCIGCKSCMQACPYEVINYNSKEPHGYW 116 >gi|94311696|ref|YP_584906.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93355548|gb|ABF09637.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cupriavidus metallidurans CH34] Length = 726 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T C LC CV CP + LA C+ CG+CE CP DAI Sbjct: 590 VDTARCTLC--MACVGACPTQALRDNAERPVLAFVERNCVQCGLCEKTCPEDAI 641 >gi|296136307|ref|YP_003643549.1| electron transport complex, RnfABCDGE type, B subunit [Thiomonas intermedia K12] gi|295796429|gb|ADG31219.1| electron transport complex, RnfABCDGE type, B subunit [Thiomonas intermedia K12] Length = 210 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 21/103 (20%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLEL 65 CI C T C++ CPVD + + D C C +C P CPVD I+ + + P L Sbjct: 88 CIGC--TLCIQACPVDAIAGVSKRMHTVIDDWCTGCALCLPPCPVDCIRMEAQADPALAT 145 Query: 66 WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 N+ W S A+ D +Q+Y ++ +P Sbjct: 146 RSGWNA-----W-----------SPAQADEARQRYARHLERHP 172 >gi|55378119|ref|YP_135969.1| ferridoxin protein [Haloarcula marismortui ATCC 43049] gi|55230844|gb|AAV46263.1| putative ferridoxin protein [Haloarcula marismortui ATCC 43049] Length = 711 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 17 CVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 C +CP D GE LA + +C++CG+CE CP AI GL+L L + Sbjct: 587 CTNLCPTDAIQRTGEGELAFNHADCVNCGLCEEGCPETAIT--MHDGLDLSLLPENRGGE 644 Query: 76 QWPNI 80 W + Sbjct: 645 AWVTV 649 >gi|255324416|ref|ZP_05365533.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Corynebacterium tuberculostearicum SK141] gi|311740730|ref|ZP_07714557.1| 4Fe-4S ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] gi|255298322|gb|EET77622.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Corynebacterium tuberculostearicum SK141] gi|311304250|gb|EFQ80326.1| 4Fe-4S ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] Length = 352 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C H C++VCP + E + + D C CG C CP I+ + G+ L Sbjct: 125 CKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVAL 182 >gi|167630112|ref|YP_001680611.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] gi|167592852|gb|ABZ84600.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] Length = 373 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V + C +C C+ CPVD GE + I + CI CG C CP AI + + Sbjct: 189 VNDKCKVCGK--CLRWCPVDAISLGERAV-IAGERCIGCGECTVTCPHKAIAVNWKTDAG 245 Query: 65 LWLKINSEYATQWPNITTKKE 85 L + +EYA + ++ K+E Sbjct: 246 LLQEKMAEYA--YASVKEKRE 264 >gi|116074820|ref|ZP_01472081.1| ferredoxin [Synechococcus sp. RS9916] gi|116068042|gb|EAU73795.1| ferredoxin [Synechococcus sp. RS9916] Length = 74 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DC++ CPV C +G F I D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCLDACPVACIQPGKGRNKKGTEFFWIDFDTCIDCGICLQVCPVEGAILAEERPDLQ 71 >gi|159900206|ref|YP_001546453.1| cyclic nucleotide-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893245|gb|ABX06325.1| cyclic nucleotide-binding protein [Herpetosiphon aurantiacus ATCC 23779] Length = 454 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT---- 59 +T++C C+ +CVE CP +N D C C C CP DA++ T Sbjct: 335 ITQSCRQCRVGAECVEACPEAAIQWDDNGALRITDACTGCNECVLACPYDAVESQTIFLQ 394 Query: 60 ---EPGLELWLKINSEYATQWPNITTKK 84 P +LW ++ + P K Sbjct: 395 NQQGPLWQLWQRMRQQSHQIQPKTVASK 422 >gi|83941743|ref|ZP_00954205.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] gi|83847563|gb|EAP85438.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] Length = 650 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ +C+++CP +AI P C CG C CP AI D P Sbjct: 268 LCAHSRAGQAACSNCLDLCPTGAITSAGEHVAIDPMICAGCGSCSAVCPSGAITYDAPPV 327 Query: 63 LELWLKINSEYAT 75 L+ ++++ +T Sbjct: 328 DTLFRRLSTLAST 340 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP DAI Sbjct: 497 VDTDACTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAI 548 >gi|83855221|ref|ZP_00948751.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] gi|83843064|gb|EAP82231.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] Length = 650 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ +C+++CP +AI P C CG C CP AI D P Sbjct: 268 LCAHSRAGQPACSNCLDLCPTGAITSAGEHVAIDPMICAGCGSCSAVCPSGAITYDAPPV 327 Query: 63 LELWLKINSEYAT 75 L+ ++++ +T Sbjct: 328 DTLFRRLSTLAST 340 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP +AI Sbjct: 497 VDTDACTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPENAI 548 >gi|119995|sp|P07508|FER_CLOTM RecName: Full=Ferredoxin gi|225169|prf||1210220A ferredoxin Length = 55 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y +T+ CI C C CPV G++ I D CI+CG C CPVDA Sbjct: 1 AYFITDACISCGA--CESECPVSPISPGDSVYVIDADACIECGACANVCPVDA 51 >gi|271501139|ref|YP_003334164.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270344694|gb|ACZ77459.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 208 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+H + C +VCPV+ +N + + + CI C +C CP AI P Sbjct: 49 VLCRHCEDAPCAKVCPVNAITHQDNAVLLDENTCIGCKLCAIACPFGAITP 99 >gi|78222251|ref|YP_383998.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] gi|78193506|gb|ABB31273.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] Length = 74 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +V++++C C CV+ CPV+ + I D CIDCG C CP AI Sbjct: 19 VAHVISDDCTNCGS--CVDSCPVNAIAPAGDKHKIDGDTCIDCGACVDTCPTSAIS 72 >gi|325958954|ref|YP_004290420.1| methyl-viologen-reducing hydrogenase subunit delta [Methanobacterium sp. AL-21] gi|325330386|gb|ADZ09448.1| methyl-viologen-reducing hydrogenase delta subunit [Methanobacterium sp. AL-21] Length = 777 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 26/119 (21%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C LC+ C+++C + EN L I P C CG C EC +AI + +L+ Sbjct: 588 CNLCQK--CIDICSFKAAFIQENVLKIDPIACNGCGACIAECETNAIDIIGQTDEQLFAM 645 Query: 69 INSEYATQWP------------------NITTKKESLPSAAK------MDGVKQKYEKY 103 I+ + P NI K S+PS+ + M+ V K+ +Y Sbjct: 646 IDGMLINKKPDEKRIIAFLDSVGYVSADNIGINKISVPSSIRIIKVPYMNRVMYKHIRY 704 >gi|258516509|ref|YP_003192731.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780214|gb|ACV64108.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 947 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V T +C C C+ CP E+ + I+P +C CG+C ECP++A++ Sbjct: 880 VNTGDCAAC--LTCLRTCPYSVPKIVEHKVFINPVQCRGCGICTSECPLNALE 930 >gi|257052556|ref|YP_003130389.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Halorhabdus utahensis DSM 12940] gi|256691319|gb|ACV11656.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Halorhabdus utahensis DSM 12940] Length = 97 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CP EGE+F A D C CG+CE CPVDAI Sbjct: 41 AETCIACGQ--CDTFCPDQAAKPVEGEDFYAFDLDYCKGCGICEEVCPVDAI 90 >gi|227485286|ref|ZP_03915602.1| hydrogenase large subunit domain protein [Anaerococcus lactolyticus ATCC 51172] gi|227236746|gb|EEI86761.1| hydrogenase large subunit domain protein [Anaerococcus lactolyticus ATCC 51172] Length = 508 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CV VCP + I D+CI CG C CP +AI P Sbjct: 115 VTDQCHACIGHPCVNVCPKNAVSYSSKGAKIDQDKCIKCGKCVEACPYNAINHQKRP 171 >gi|171185513|ref|YP_001794432.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934725|gb|ACB39986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 279 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 NC+ C C CPV E + I DECI CG C+ CP D K Sbjct: 94 NCMHCVEAPCARACPVGAIKVSPEGAVVIEKDECIGCGYCQMACPYDVPK 143 >gi|78043320|ref|YP_359720.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995435|gb|ABB14334.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 349 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV VCP + ++ +AI +EC +CG C+ CP AI Sbjct: 33 CVTVCPANAIFKDGEKIAIKKEECTNCGFCKAVCPTGAI 71 >gi|332981894|ref|YP_004463335.1| electron transfer flavoprotein subunit alpha [Mahella australiensis 50-1 BON] gi|332699572|gb|AEE96513.1| Electron transfer flavoprotein alpha subunit [Mahella australiensis 50-1 BON] Length = 397 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ ENC C CV CP + EN A+ D C CG C C DAI E G Sbjct: 5 IIEENCTGC--AVCVRACPFGAI-KMENDKAVILDNCTLCGSCADACKFDAIDFQAERG 60 >gi|270158204|ref|ZP_06186861.1| electron transport complex family protein [Legionella longbeachae D-4968] gi|289163539|ref|YP_003453677.1| Electron transport complex protein [Legionella longbeachae NSW150] gi|269990229|gb|EEZ96483.1| electron transport complex family protein [Legionella longbeachae D-4968] gi|288856712|emb|CBJ10523.1| Electron transport complex protein [Legionella longbeachae NSW150] Length = 204 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C T C++ CPVD G+ A+ EC CG+C CPVD I+ Sbjct: 84 CIGC--TKCIKACPVDAIIGSGKLMHAVMTHECTGCGLCVAPCPVDCIE 130 >gi|225572064|ref|ZP_03780928.1| hypothetical protein RUMHYD_00358 [Blautia hydrogenotrophica DSM 10507] gi|225040499|gb|EEG50745.1| hypothetical protein RUMHYD_00358 [Blautia hydrogenotrophica DSM 10507] Length = 584 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+NC C C CPV E + +I P+ CI CG CE C DA+K Sbjct: 530 YEITDNCKGCGA--CARKCPVGAISGEKKKVHSIDPNVCIKCGKCEESCKFDAVK 582 >gi|108562704|ref|YP_627020.1| ferrodoxin [Helicobacter pylori HPAG1] gi|207108360|ref|ZP_03242522.1| ferrodoxin [Helicobacter pylori HPKX_438_CA4C1] gi|107836477|gb|ABF84346.1| ferrodoxin [Helicobacter pylori HPAG1] gi|261839133|gb|ACX98898.1| ferrodoxin [Helicobacter pylori 52] gi|308063139|gb|ADO05026.1| ferrodoxin [Helicobacter pylori Sat464] gi|317181620|dbj|BAJ59404.1| ferredoxin [Helicobacter pylori F57] Length = 83 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 >gi|332798543|ref|YP_004460042.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696278|gb|AEE90735.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] Length = 139 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C+LC + C+ CP + E + ++ C CG+CE CP AI+ T P + Sbjct: 55 EQCMLCTNPRCIAACPTGALSKDEESGIIKVNKMACTGCGLCEDACPFGAIELHTFPTM 113 >gi|325270555|ref|ZP_08137155.1| ferredoxin [Prevotella multiformis DSM 16608] gi|324987131|gb|EGC19114.1| ferredoxin [Prevotella multiformis DSM 16608] Length = 55 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C++ CPV EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CIDECPVGAISEGDIY-KIDADACTECGTCASVCPNEAIS 53 >gi|152982452|ref|YP_001353663.1| iron-sulfur binding protein [Janthinobacterium sp. Marseille] gi|151282529|gb|ABR90939.1| iron-sulfur binding protein [Janthinobacterium sp. Marseille] Length = 699 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M V ++C LC CV CP + N L C+ CG+CE CP +AI Sbjct: 560 MVMVNKDSCTLC--MSCVGACPESALTDNANMPQLRFIEKNCVQCGLCEKTCPENAI 614 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 8/53 (15%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H T C++VC + + + ++P+ C+ CG C CP A+ Sbjct: 313 LCAHGRNGKVGCTACIDVCSAEAVSHHGDQIKVNPNLCVGCGACTTVCPSGAL 365 >gi|120600350|ref|YP_964924.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560443|gb|ABM26370.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|319424953|gb|ADV53027.1| sulfur reductase, FeS subunit, PhsB [Shewanella putrefaciens 200] Length = 188 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHADKCVGCMYCVAACPYKVRFMNPETK 114 >gi|46203868|ref|ZP_00050860.2| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 153 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECP--VDAIKPDTE 60 V+ C+ C C VCPV+CFY + + +H D CI G C CP AI P + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGFGYCFYACPFGAHAISPRRQ 109 >gi|192358977|ref|YP_001981503.1| Electron transport complex protein rnfB [Cellvibrio japonicus Ueda107] gi|190685142|gb|ACE82820.1| Electron transport complex protein rnfB [Cellvibrio japonicus Ueda107] Length = 223 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP-D 58 + ++ + CI C T C++ CP+D + I DEC C +C CPVD I+ Sbjct: 114 VAFIREDECIGC--TKCIQACPMDAILGAAKQMHTIIADECTGCDLCVEPCPVDCIEMIP 171 Query: 59 TEPGLELW 66 PGL+ W Sbjct: 172 VVPGLDTW 179 >gi|297619597|ref|YP_003707702.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378574|gb|ADI36729.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 139 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 31/56 (55%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C+ C++VCP + + + + + D+CI C +C CP+ AI+ D G+ Sbjct: 34 RCMHCESAPCIQVCPENALKKVGDRVILDNDKCIGCSLCTEVCPIGAIRIDGATGI 89 >gi|170077855|ref|YP_001734493.1| ferredoxin-like protein [Synechococcus sp. PCC 7002] gi|169885524|gb|ACA99237.1| ferredoxin-like protein [Synechococcus sp. PCC 7002] Length = 74 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCVE CPV C ++G ++ I D CIDCG+C CPV+ AI P+ L+ Sbjct: 14 ADCVEACPVACIHDGPGKNAKGTDWYWIDFDVCIDCGICIQVCPVEGAIIPEENATLQ 71 >gi|323702453|ref|ZP_08114117.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfotomaculum nigrificans DSM 574] gi|323532592|gb|EGB22467.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfotomaculum nigrificans DSM 574] Length = 448 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 M V+ C+ C+ C+ CP + + +N + + D+C++CG C CPV+A+ Sbjct: 1 MAVNVSPACMGCQA--CITTCPYEALFINDNGVCEVIKDKCVECGKCVEVCPVEAL 54 >gi|291520273|emb|CBK75494.1| 4Fe-4S binding domain [Butyrivibrio fibrisolvens 16/4] Length = 56 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++C+ C C CPV +G++ I C++CG C CP AI Sbjct: 1 MAYVISDSCVSCGT--CEPECPVGAISQGDSQFQIDETACVECGTCAGVCPTGAIS 54 >gi|253701687|ref|YP_003022876.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251776537|gb|ACT19118.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 97 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG--- 62 E C+ C C+EVCP F EG+ + D C++CG C CP A+ D G Sbjct: 18 ELCVGCGR--CIEVCPHQVFQLEGKRAIVADRDACMECGACALNCPAAALNVDAGVGCAS 75 Query: 63 --LELWLK 68 + WL+ Sbjct: 76 GLINEWLR 83 >gi|157376057|ref|YP_001474657.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318431|gb|ABV37529.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 211 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 11/115 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 Y + C C CV+ CPV ++ + +H D CI C C CP DA P Sbjct: 62 FAYYTSIGCNHCSEPACVKACPVGAMHKRKQDGLVHVASDLCIGCESCARACPYDA--PQ 119 Query: 59 TEPGLELWLKINS--EYATQWPNITTKKESLPSAA----KMDGVKQKYEKYFSPN 107 + ++ K + E + N T ES P A MD +K+KY PN Sbjct: 120 IDKARKVMTKCDGCFERLAEGKNPTC-VESCPMRAIDFGTMDALKEKYPDAVKPN 173 >gi|90413851|ref|ZP_01221838.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum 3TCK] gi|90325162|gb|EAS41665.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum 3TCK] Length = 566 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP 57 +++C LC CV VCP F+ G L + ++CI CG+CE CP V +KP Sbjct: 431 SDDCTLC--MSCVAVCPTRAFHAVGGRPGLQLIEEDCIQCGLCEKACPEKVLTLKP 484 >gi|261403738|ref|YP_003247962.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370731|gb|ACX73480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 62 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LCK +C E CP++ F +G+ + PD+C CGVCE CP A+K + E Sbjct: 9 LCKGAECAECANNCPMEVFEIDGDKVVVARPDDCTYCGVCEDVCPTGAVKVEPE 62 >gi|15616781|ref|NP_239993.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11133970|sp|P57259|NUOI_BUCAI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|25282723|pir||G84948 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain I [imported] - Buchnera sp. (strain APS) gi|10038844|dbj|BAB12879.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 180 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC ++ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVDCISLQKSEKTDGRWYPKFFRINFSRCIFCGLCEEACPTAAIQ 115 Query: 57 --PDTE 60 PD E Sbjct: 116 LMPDFE 121 >gi|146291718|ref|YP_001182142.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563408|gb|ABP74343.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 188 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHADKCVGCMYCVAACPYKVRFMNPETK 114 >gi|260434027|ref|ZP_05787998.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417855|gb|EEX11114.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 651 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ +C+++CP + +AI P C CG C CP AI + P Sbjct: 268 LCAHSRAGQVGCSNCLDICPTGAITPAGDHVAIDPMVCAGCGECAALCPSTAISYEDPPV 327 Query: 63 LELWLKINSEYAT 75 L ++ + AT Sbjct: 328 AALLARMQTLAAT 340 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V TE C LC CV +CP + + L D C+ CG+C+ CP AI Sbjct: 498 VDTEACTLC--LSCVSLCPSGALIDNPDLPQLNYQQDACLQCGLCKTICPESAI 549 >gi|150399059|ref|YP_001322826.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150011762|gb|ABR54214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 165 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C +VCPVD E E L ++ D CI C +C CP+ A+ + E Sbjct: 51 CRQVCPVDAIEEMEGVLIVNEDACILCRLCMIACPIGALVINNE 94 >gi|238021504|ref|ZP_04601930.1| hypothetical protein GCWU000324_01404 [Kingella oralis ATCC 51147] gi|237868484|gb|EEP69490.1| hypothetical protein GCWU000324_01404 [Kingella oralis ATCC 51147] Length = 324 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CPVD + + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPVDAIMGASKQMHTVLADECTGCGLCVAPCPVDCI 124 >gi|163747832|ref|ZP_02155170.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161378904|gb|EDQ03335.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 654 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV TE +LC H T C+++CP + + + P C CG C CP A Sbjct: 266 YVRTEP-LLCAHSRAGQTGCTACLDLCPTGAIVPDGDHVTVDPMICAGCGACSSACPSGA 324 Query: 55 IKPDTEP 61 I D P Sbjct: 325 ISYDAPP 331 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 C LC CV +CP + + L D C+ CG+CE CP DAI Sbjct: 507 CTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCEHICPEDAI 553 >gi|90426047|ref|YP_534417.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] gi|90108061|gb|ABD90098.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] Length = 205 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 2 TYVVTE--NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY +T C C+ C VCPVD + + ++ CI C +C CP AI P Sbjct: 42 TYEITAPVQCRHCEDAPCARVCPVDAIKLTDGQVVLNEQTCIGCKMCAIACPFGAITPSG 101 Query: 60 EP 61 P Sbjct: 102 TP 103 >gi|302348244|ref|YP_003815882.1| putative ATPase RIL [Acidilobus saccharovorans 345-15] gi|302328656|gb|ADL18851.1| putative ATPase RIL [Acidilobus saccharovorans 345-15] Length = 601 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 9/48 (18%) Query: 17 CVEVCPV-----DCFYEGENFL----AIHPDECIDCGVCEPECPVDAI 55 C+ VCP+ D E + IH D CI CG+C CP DAI Sbjct: 21 CISVCPINKSKKDVAIEADTKARAKPVIHEDVCIGCGLCVKACPFDAI 68 >gi|238912647|ref|ZP_04656484.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 287 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|219681536|ref|YP_002467921.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682092|ref|YP_002468476.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471217|ref|ZP_05635216.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219621825|gb|ACL29981.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624379|gb|ACL30534.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085903|gb|ADP65985.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086476|gb|ADP66557.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087057|gb|ADP67137.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087614|gb|ADP67693.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 180 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC ++ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVDCISLQKSEKTDGRWYPKFFRINFSRCIFCGLCEEACPTAAIQ 115 Query: 57 --PDTE 60 PD E Sbjct: 116 LMPDFE 121 >gi|114046018|ref|YP_736568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113887460|gb|ABI41511.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 188 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHSDKCVGCMYCVAACPYKVRFMNPETK 114 >gi|332289260|ref|YP_004420112.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] gi|330432156|gb|AEC17215.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] Length = 205 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C++ C +VCP ++ E+ F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYLSISCNHCENPACTKVCPTGAMHKNEDGFVIVNEEVCIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 KKG 121 >gi|300871807|ref|YP_003786680.1| ferredoxin, 4Fe-4S [Brachyspira pilosicoli 95/1000] gi|300689508|gb|ADK32179.1| ferredoxin, 4Fe-4S [Brachyspira pilosicoli 95/1000] Length = 55 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ +C+ C C+ C D EG+ + I PD+C DCG CE CP +AI Sbjct: 1 MPRVINNDCVACGS--CLPECAFDAISEGDIY-KIDPDKCTDCGACEAVCPSNAI 52 >gi|325677740|ref|ZP_08157388.1| ferredoxin [Ruminococcus albus 8] gi|324110563|gb|EGC04731.1| ferredoxin [Ruminococcus albus 8] Length = 56 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y + ++CI C C+ CPV E + I C+DCG C CPV A Sbjct: 1 MAYKINDDCIGCGA--CMAECPVGAISEADGKCVIDASACLDCGACAGTCPVGA 52 >gi|188585512|ref|YP_001917057.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350199|gb|ACB84469.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 507 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+E CP D I+ ++CI+CG C+ CP +AI P Sbjct: 110 FTVTEACRGCVAHYCMESCPKDAISFINRQAYINQEKCIECGKCKNMCPFNAISDVMRP 168 >gi|78185918|ref|YP_373961.1| Fe-S-cluster-containing hydrogenase components 1-like [Chlorobium luteolum DSM 273] gi|78165820|gb|ABB22918.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chlorobium luteolum DSM 273] Length = 523 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C+ CV++CPV+ ++ + + CI C C CP +++ D E Sbjct: 51 YFTVLRCNHCEEPPCVDICPVEALHKRPDGIVDFDSRRCIGCKACAQACPYNSVYIDPE 109 >gi|326422552|gb|EGD71947.1| ABC transporter related protein [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 572 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 17 CVEVCP------VDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 C EVCP + Y EN AI CI CG+C CP DAIK Sbjct: 21 CAEVCPRVREGAKETVYARENGKAAITESLCISCGICVKRCPFDAIK 67 >gi|302342956|ref|YP_003807485.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639569|gb|ADK84891.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 550 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ E C C C++ CP + I D C+ CG C CP DAI+P Sbjct: 17 ILPEKCTGC--VLCMKACPNQAIRVHDGKAVIRFDHCVACGACYRVCPADAIEP 68 >gi|297543698|ref|YP_003676000.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841473|gb|ADH59989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 372 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK+ + Sbjct: 248 DAFVERMTEYA--YGAYSTKKDKI 269 >gi|134045117|ref|YP_001096603.1| pyruvate ferredoxin oxidoreductase subunit delta [Methanococcus maripaludis C5] gi|132662742|gb|ABO34388.1| pyruvate ferredoxin oxidoreductase, delta subunit [Methanococcus maripaludis C5] Length = 85 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C+ C++ C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 EKCVKCEN--CYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKTERE 83 >gi|327309967|ref|YP_004336864.1| Iron-sulfur protein [Thermoproteus uzoniensis 768-20] gi|326946446|gb|AEA11552.1| Iron-sulfur protein [Thermoproteus uzoniensis 768-20] Length = 441 Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CV+VCP + +++ P +C +CG+C CP A+ Sbjct: 117 SECVDVCPTGALKLADRSVSVDPSKCTECGLCISSCPTGAL 157 >gi|119720028|ref|YP_920523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525148|gb|ABL78520.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 187 Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y++ C C++ CV VCP Y + + + I+PD CI C C CP D + Sbjct: 56 YILLVQCQHCENAPCVAVCPTGASYIDRDGLVKINPDLCIGCKYCMTACPYGMRWLDPDF 115 Query: 62 GL 63 GL Sbjct: 116 GL 117 >gi|251790292|ref|YP_003005013.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Dickeya zeae Ech1591] gi|247538913|gb|ACT07534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya zeae Ech1591] Length = 208 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+H + C +VCPV+ +N + + + CI C +C CP AI P Sbjct: 49 VLCRHCEDAPCAKVCPVNTIRHQDNAVLLDENTCIGCKLCAIACPFGAITP 99 >gi|256826506|ref|YP_003150465.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582649|gb|ACU93783.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 206 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y V+ +C C + C VCP ++ ++++ D+CI CG C CP +A K D Sbjct: 59 FVYHVSVSCNHCDNPACTGVCPTGAMHKNPETGLVSVNTDKCIGCGYCHMACPYNAPKVD 118 Query: 59 TEPG 62 G Sbjct: 119 RALG 122 >gi|189345592|ref|YP_001942121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] gi|189339739|gb|ACD89142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 517 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDA--IKPDT 59 Y C C CV++CPV+ + + + CI C C CP +A I PDT Sbjct: 51 YFTVLRCNHCAEPPCVDICPVEALQKRPDGIVDFDSRRCIGCKACAQACPYNALYIDPDT 110 >gi|257454853|ref|ZP_05620104.1| electron transport complex, rnfaBcdge type, b subunit [Enhydrobacter aerosaccus SK60] gi|257447786|gb|EEV22778.1| electron transport complex, rnfaBcdge type, b subunit [Enhydrobacter aerosaccus SK60] Length = 269 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E+CI C T C+ CPVD G+ I D C C +C P CPVD I+ Sbjct: 114 EDCIGC--TKCIPACPVDAIIGSGKRMHTIFTDLCTGCELCLPPCPVDCIE 162 >gi|257792649|ref|YP_003183255.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488937|ref|ZP_07947467.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831018|ref|ZP_08164342.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] gi|257476546|gb|ACV56866.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912011|gb|EFV33590.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486939|gb|EGC89385.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] Length = 253 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKPDTEPGLE 64 E+C C C+ CPV Y E A D +CI CG+C CP + + D+E G+ Sbjct: 150 EHCKQCADPACMNYCPVHAIYADEESGARTVDTKKCIGCGMCSQACPWNMPRVDSETGVS 209 Query: 65 LWLKINSEYATQWPNITTK 83 A Q PN K Sbjct: 210 TKCISCGRCAEQCPNGAIK 228 >gi|188586890|ref|YP_001918435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351577|gb|ACB85847.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 333 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 16/87 (18%) Query: 4 VVTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E CI K C CP + + + + P++C CG+C CP AIKP+ Sbjct: 19 VIQERCISYKMRLMDCDKCSRKCPQNAIKVRKGKVLLSPEDCSGCGICAGACPTHAIKPE 78 Query: 59 TEPGLELWLKINSEYATQWPNITTKKE 85 N Y T++ I K++ Sbjct: 79 -----------NLNYHTKFKEIVQKEQ 94 >gi|254974516|ref|ZP_05270988.1| iron-dependent hydrogenase [Clostridium difficile QCD-66c26] gi|255313641|ref|ZP_05355224.1| iron-dependent hydrogenase [Clostridium difficile QCD-76w55] gi|255516325|ref|ZP_05384001.1| iron-dependent hydrogenase [Clostridium difficile QCD-97b34] gi|255649424|ref|ZP_05396326.1| iron-dependent hydrogenase [Clostridium difficile QCD-37x79] gi|260682592|ref|YP_003213877.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260686192|ref|YP_003217325.1| iron-dependent hydrogenase [Clostridium difficile R20291] gi|306519505|ref|ZP_07405852.1| iron-dependent hydrogenase [Clostridium difficile QCD-32g58] gi|260208755|emb|CBA61611.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260212208|emb|CBE02900.1| iron-dependent hydrogenase [Clostridium difficile R20291] Length = 498 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Query: 17 CVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE 72 C VCP N + IH D CI+CG C CP AI K P + K + Sbjct: 166 CKSVCPTGALDFNRNTMKAMIHEDNCINCGACISACPFGAISDKSLIAPVAKKLAKKENM 225 Query: 73 YATQWPNITTKKES 86 YA P IT + +S Sbjct: 226 YAIVAPAITGQIDS 239 >gi|89897363|ref|YP_520850.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336811|dbj|BAE86406.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 193 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CVEVCPV Y+ E+ + + +CI CG C CP +A Sbjct: 63 LCNHCDNAPCVEVCPVKASYKREDGMVLLDKKKCIGCGYCVASCPYNA 110 >gi|290559230|gb|EFD92577.1| ABC transporter related protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 482 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 17 CVEVCP------VDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 C EVCP + Y EN AI CI CG+C CP DAIK Sbjct: 21 CAEVCPRVREGAKETVYARENGQAAITESLCISCGICVKRCPFDAIK 67 >gi|27904653|ref|NP_777779.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372472|sp|Q89AT9|NUOI_BUCBP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|27904050|gb|AAO26884.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 180 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 21/116 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C ++ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACGL--CSVVCPVSCISLKKSTLKNNKWYPKFFRINLSRCIFCGLCEEACPTLAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 ++ L SEY Q ++ +K+ L + + + + K+ G KN Sbjct: 116 LISDVEL-------SEYKRQ--DLVYEKDDLLISGQGKYLDYDFYKFSGVEVGTKN 162 >gi|325972119|ref|YP_004248310.1| Fe-S cluster domain protein [Spirochaeta sp. Buddy] gi|324027357|gb|ADY14116.1| Fe-S cluster domain protein [Spirochaeta sp. Buddy] Length = 445 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+V C C H C++ CP + I D CI+CG C CP +AI Sbjct: 11 YIVESACKGCTH--CMKRCPTQAIRIAKGKARIDNDLCIECGQCMAVCPNNAI 61 >gi|317180082|dbj|BAJ57868.1| ferredoxin [Helicobacter pylori F32] Length = 83 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 >gi|317177092|dbj|BAJ54881.1| ferredoxin [Helicobacter pylori F16] Length = 83 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 >gi|260170367|ref|ZP_05756779.1| flavodoxin [Bacteroides sp. D2] gi|315918726|ref|ZP_07914966.1| flavodoxin [Bacteroides sp. D2] gi|313692601|gb|EFS29436.1| flavodoxin [Bacteroides sp. D2] Length = 267 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 T CI C C++ CP++ F +N L + CI CG CE ECP DA+ Sbjct: 188 TSRCIACGK--CMKSCPMNVFTLKDNAKTPLPVDEMNCIMCGKCEKECPADAV 238 >gi|33240385|ref|NP_875327.1| ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237912|gb|AAP99979.1| Ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 73 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYE-------GENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 ++CV+ CPVDC + G + I CIDCGVC CP+ +A+ + P L+ Sbjct: 14 SECVKACPVDCIKQASGTNKKGTTYYFIDFSTCIDCGVCLSVCPIKNAVVSEERPDLQ 71 >gi|330828774|ref|YP_004391726.1| iron-sulfur cluster-binding protein [Aeromonas veronii B565] gi|328803910|gb|AEB49109.1| Iron-sulfur cluster-binding protein [Aeromonas veronii B565] Length = 588 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Query: 8 NCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAI--KPDTE 60 +C LC CV VCP + G NF+ +CI CG+CE CP AI P + Sbjct: 455 DCTLC--MGCVAVCPSRALHAVGHAPGLNFIE---QDCIQCGMCEKACPEQAIVLTPRLQ 509 Query: 61 P 61 P Sbjct: 510 P 510 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELWLKINSEY 73 C++VCP D + I P C G C CP AI +PD + L++ Y Sbjct: 233 CLDVCPTDALKPINGRIQIDPHLCQGFGSCASACPTGAIGYHQPDANTSGDYLLRLLKHY 292 >gi|332654222|ref|ZP_08419966.1| Fe-hydrogenase large subunit family protein [Ruminococcaceae bacterium D16] gi|332517308|gb|EGJ46913.1| Fe-hydrogenase large subunit family protein [Ruminococcaceae bacterium D16] Length = 505 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 5 VTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C+EVCP D +G++F I +CI CG C CP AI P Sbjct: 116 VTNMCQGCLAHPCMEVCPKDAISLVQGKSF--IDQTKCIKCGKCADACPYGAILKLERPC 173 Query: 63 LE 64 E Sbjct: 174 AE 175 >gi|124027636|ref|YP_001012956.1| hypothetical protein Hbut_0757 [Hyperthermus butylicus DSM 5456] gi|123978330|gb|ABM80611.1| hypothetical protein Hbut_0757 [Hyperthermus butylicus DSM 5456] Length = 494 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + V E C LC C + CP EG L +H D CI CG C CP DAI Sbjct: 341 LVIVDQERCTLCGA--CAKECPTGALKLREEAEGSALLFLH-DRCIACGWCREVCPEDAI 397 >gi|291563047|emb|CBL41863.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 513 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP D I PD+CI CG C C AI P Sbjct: 123 VTDGCQGCLAHPCVEVCPKDAVSLDRTNGRSRIDPDKCIKCGQCANVCAYHAIIIQERP 181 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 V + I+ + C C +D + EN A I+ D+C+ CG C CP AI ++ Sbjct: 169 VCAYHAIIIQERPCAAACGMDAIHSDENGKADINYDKCVSCGQCLVNCPFGAIADKSQ 226 >gi|85704196|ref|ZP_01035299.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85671516|gb|EAQ26374.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 653 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T+ C LC CV +CP + E+ L D C+ CG+C CP AI EP Sbjct: 500 VNTDACTLC--LSCVSLCPSGALMDNEDKPQLRFQEDACLQCGICATICPEKAIT--LEP 555 Query: 62 GLEL 65 + L Sbjct: 556 RMNL 559 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 3 YVVTENCILCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV E ++C H+ C+++CP + ++I P C CG C CP A Sbjct: 261 YVALEP-LICAHSRAEQTGCSKCLDICPTGAITPDGDHVSIDPMICAGCGACAARCPSGA 319 Query: 55 IKPDTEP 61 I D P Sbjct: 320 ITYDAPP 326 >gi|204929685|ref|ZP_03220759.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321404|gb|EDZ06604.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613728|gb|EFY10667.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619529|gb|EFY16405.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625034|gb|EFY21863.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629523|gb|EFY26299.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634046|gb|EFY30783.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635516|gb|EFY32227.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639808|gb|EFY36487.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644430|gb|EFY40971.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648575|gb|EFY45024.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655205|gb|EFY51514.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658252|gb|EFY54518.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664253|gb|EFY60450.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669420|gb|EFY65569.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673147|gb|EFY69253.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676539|gb|EFY72607.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683289|gb|EFY79303.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685825|gb|EFY81818.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194768|gb|EFZ79956.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199544|gb|EFZ84635.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204681|gb|EFZ89679.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208129|gb|EFZ93074.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210147|gb|EFZ95048.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217015|gb|EGA01737.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221813|gb|EGA06217.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225008|gb|EGA09263.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229297|gb|EGA13421.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235388|gb|EGA19472.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237426|gb|EGA21489.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245180|gb|EGA29181.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248883|gb|EGA32809.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253170|gb|EGA37002.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255404|gb|EGA39172.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262037|gb|EGA45602.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266348|gb|EGA49836.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269821|gb|EGA53271.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 287 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|158634528|gb|ABW76116.1| Fe-hydrogenase 1 [Trimastix pyriformis] Length = 439 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C+ CP + I PD C+ CG C+ CP AI Sbjct: 115 AYFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGACQKVCPYHAI 168 >gi|147918998|ref|YP_687275.1| 2(4Fe-4S) ferredoxin-domain-containing protein [uncultured methanogenic archaeon RC-I] gi|110622671|emb|CAJ37949.1| 2(4Fe-4S) ferredoxin-domain protein [uncultured methanogenic archaeon RC-I] Length = 370 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C+ C C VCP + ++ + + CI CG C CPV +I + E + + Sbjct: 194 KGCVGCGR--CAAVCPRIAVHMEQDIAVVDDEVCIGCGECMTVCPVGSISFNWEKDIVPF 251 Query: 67 LKINSEYA 74 +++ +EYA Sbjct: 252 MEMMTEYA 259 >gi|18313615|ref|NP_560282.1| polyferredoxin [Pyrobaculum aerophilum str. IM2] gi|18161161|gb|AAL64464.1| polyferredoxin [Pyrobaculum aerophilum str. IM2] Length = 370 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C + CP Y + + + CIDCG+C CPVDA+K + P Sbjct: 87 CIWCGL--CADYCPASAIEYVERKNVKVKYESCIDCGLCNSVCPVDAVKMPSLP 138 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 + E C LC CV CP D L + P CI CGVC +CP Sbjct: 255 IREGCTLCGA--CVNACPTDALSVRGYELRLVPALCIACGVCVAKCP 299 >gi|288930542|ref|YP_003434602.1| methyl-viologen-reducing hydrogenase subunit delta [Ferroglobus placidus DSM 10642] gi|288892790|gb|ADC64327.1| methyl-viologen-reducing hydrogenase delta subunit [Ferroglobus placidus DSM 10642] Length = 777 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV E CI C+ C EVC + I P+ C+ CGVC CP DAI Sbjct: 569 AYVNEEKCIGCRI--CEEVCNFNAVTFENKKAKIDPNACVMCGVCAASCPADAI 620 >gi|238752180|ref|ZP_04613661.1| Electron transport complex protein rnfB [Yersinia rohdei ATCC 43380] gi|238709551|gb|EEQ01788.1| Electron transport complex protein rnfB [Yersinia rohdei ATCC 43380] Length = 207 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ ENCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|159027686|emb|CAO89551.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 74 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C + +G ++ I CIDCG+C CPV+ AI P+ P L+ Sbjct: 14 ADCVSACPVACIHPGLGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAILPEERPDLQ 71 >gi|160943469|ref|ZP_02090702.1| hypothetical protein FAEPRAM212_00959 [Faecalibacterium prausnitzii M21/2] gi|158445148|gb|EDP22151.1| hypothetical protein FAEPRAM212_00959 [Faecalibacterium prausnitzii M21/2] gi|295103736|emb|CBL01280.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Faecalibacterium prausnitzii SL3/3] Length = 56 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV ++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCGA--CEGACPVGAITIENGAAVVNADSCIDCGACEGACPTGAIAAE 56 >gi|152988215|ref|YP_001347022.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PA7] gi|150963373|gb|ABR85398.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PA7] Length = 776 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 12/55 (21%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECPVD 53 CI C DC +VCP F+ E E LA H +CI+CG C CP D Sbjct: 369 CIRCG--DCAQVCPASLLPQQLHFFALGGEHEQLLAHHLFDCIECGACAYICPSD 421 >gi|194445567|ref|YP_002041785.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404230|gb|ACF64452.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 287 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 26/107 (24%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----------KPDTEPG---- 62 C +VCP F + ++I CI CG C CPVDAI + DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKSVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES--LPSAAKMDGVKQKY 100 L LW +S+Y ++ +I ++ + L + A ++ ++Y Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMALAGLNLALRRY 132 >gi|119511224|ref|ZP_01630340.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] gi|119464102|gb|EAW45023.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] Length = 74 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYE-------GENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 DCV+ CPV C +E G ++ I CIDCG+C CPV DAI P+ L+ Sbjct: 14 ADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICIEVCPVADAIVPEERSDLQ 71 >gi|194476648|ref|YP_002048827.1| ferredoxin [Paulinella chromatophora] gi|171191655|gb|ACB42617.1| ferredoxin [Paulinella chromatophora] Length = 74 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 DCV CPV C + +G NF I + CIDCG+C CP+ +AI + L+ Sbjct: 14 ADCVNACPVACIHMGNGINKKGTNFYWIDFNTCIDCGICLQVCPLENAILAEERSELQ 71 >gi|200388028|ref|ZP_03214640.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605126|gb|EDZ03671.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 287 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|150402670|ref|YP_001329964.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033700|gb|ABR65813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 138 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--------- 58 C+ C+ C+ CP D + ++ + I P++CI C +C CPV AI+ D Sbjct: 34 RCMHCEDAPCLNACPEDAIKKIDDKVIIEPEKCIGCALCAEVCPVGAIQIDKCTKVAVKC 93 Query: 59 ---TEPGLELWLKINSEYATQW--PNITTKKESLPSAAK 92 E G E+ L++ A + I K+ L S K Sbjct: 94 DGCIERGSEICLEVCPTKALDYYENTIENKRAELVSKLK 132 >gi|300690753|ref|YP_003751748.1| 4Fe-4S ferredoxin [Ralstonia solanacearum PSI07] gi|299077813|emb|CBJ50451.1| putative 4Fe-4S ferredoxin [Ralstonia solanacearum PSI07] Length = 708 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 E C LC CV CP + L++ C+ CG+CE CP DAI Sbjct: 578 ERCTLC--MACVSACPSQALRDQAERPVLSMIERNCVQCGLCETTCPEDAI 626 >gi|238919983|ref|YP_002933498.1| hypothetical protein NT01EI_2087 [Edwardsiella ictaluri 93-146] gi|259646560|sp|C5BDE6|RNFB_EDWI9 RecName: Full=Electron transport complex protein rnfB gi|238869552|gb|ACR69263.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 191 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD L + D+C CG+C P CP I+ Sbjct: 115 NCIGC--TKCIQSCPVDAIVGATRALHTVISDQCTGCGLCLPPCPTSCIQ 162 >gi|238762649|ref|ZP_04623619.1| Electron transport complex protein rnfB [Yersinia kristensenii ATCC 33638] gi|238699294|gb|EEP92041.1| Electron transport complex protein rnfB [Yersinia kristensenii ATCC 33638] Length = 207 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ ENCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|168243307|ref|ZP_02668239.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449267|ref|YP_002046585.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198245772|ref|YP_002216591.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353626|ref|YP_002227427.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857935|ref|YP_002244586.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194407571|gb|ACF67790.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197940288|gb|ACH77621.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273407|emb|CAR38382.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205337655|gb|EDZ24419.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206709738|emb|CAR34090.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326624347|gb|EGE30692.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628726|gb|EGE35069.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 287 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|163784935|ref|ZP_02179692.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159879794|gb|EDP73541.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 338 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 17 CVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 C++VCP+ D Y + + I+ D+CI CG C CP +A + +L+ K+ E Sbjct: 24 CIDVCPIEDTLYIENDKIQINEDKCISCGACVGVCPTEAFSLNGFNPSDLYKKMVEENQ- 82 Query: 76 QWPNITTKKESLPSAAKMDG 95 N+ + K ++P A+ D Sbjct: 83 ---NLISCKLNVPCASSFDS 99 >gi|150401392|ref|YP_001325158.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014095|gb|ABR56546.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 63 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 16 DCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C + CP++ F +GE + H DEC CGVCE CP A+K Sbjct: 19 ECEKNCPMEVFEVDGEKVVVAHEDECTGCGVCEDVCPTGAVK 60 >gi|24375548|ref|NP_719591.1| polysulfide reductase, subunit B [Shewanella oneidensis MR-1] gi|24350427|gb|AAN57035.1|AE015837_7 polysulfide reductase, subunit B [Shewanella oneidensis MR-1] Length = 188 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPYKVRFMNPETK 114 >gi|253572693|ref|ZP_04850094.1| quinone oxidoreductase [Bacteroides sp. 1_1_6] gi|251837825|gb|EES65915.1| quinone oxidoreductase [Bacteroides sp. 1_1_6] Length = 389 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDC---FYEGENFL--AIHPDECIDCGVCEPECPV 52 E+C C + CV++CP C + + E FL I+ D C++C +CE CPV Sbjct: 8 EDC--CGCSACVQICPKCCISMYEDNEGFLYPEINKDICVNCHLCENVCPV 56 >gi|167770334|ref|ZP_02442387.1| hypothetical protein ANACOL_01677 [Anaerotruncus colihominis DSM 17241] gi|167667656|gb|EDS11786.1| hypothetical protein ANACOL_01677 [Anaerotruncus colihominis DSM 17241] Length = 513 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ C C C EVCP D I ++CI CG C CP AI Sbjct: 124 YRVTDCCQGCLAHPCKEVCPRDAVSIVHGKSVIDQEKCIKCGRCAEVCPYGAI 176 >gi|325971008|ref|YP_004247199.1| hypothetical protein SpiBuddy_1180 [Spirochaeta sp. Buddy] gi|324026246|gb|ADY13005.1| protein of unknown function DUF362 [Spirochaeta sp. Buddy] Length = 372 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C+ C+++CP + + I P CI C C CP AI D Sbjct: 320 CIQCR--KCIDICPANALTMEHKRIIIDPSVCIRCYCCHEVCPASAIAVD 367 >gi|323669543|gb|ABI30020.2| CarE [Acetobacterium woodii] Length = 396 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ E CI C + C + CP D EN +A+ D C +CG C CP +AI + G Sbjct: 5 VIEEKCIGC--SKCQKSCPFDAITI-ENKIAVIGDACTNCGTCIDVCPTEAI---LQEGT 58 Query: 64 ELWLKINSEYATQW 77 E ++ S Y W Sbjct: 59 EKIVRDLSMYKGVW 72 >gi|312879271|ref|ZP_07739071.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] gi|310782562|gb|EFQ22960.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] Length = 621 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E+C+ C C CPV E ++ P CI CG C CP A+ P + G Sbjct: 561 VTPESCVGCGA--CKRACPVGAISGETRQAHSVDPTACIGCGACLDTCPFGALSPAPKEG 618 >gi|307721539|ref|YP_003892679.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979632|gb|ADN09667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 366 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CVEVCPV+ + + ++ P EC+ CG C+ CP A D Sbjct: 24 CVEVCPVETIHLENSTISFTPSECVGCGGCDAVCPTAAYTLD 65 >gi|302387337|ref|YP_003823159.1| Electron transfer flavoprotein alpha/beta-subunit [Clostridium saccharolyticum WM1] gi|302197965|gb|ADL05536.1| Electron transfer flavoprotein alpha/beta-subunit [Clostridium saccharolyticum WM1] Length = 393 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ E C C + CV+ CP D EN LA+ C CGVC +CP DAI+ E Sbjct: 5 VIKEKCRGC--SICVKNCPFDAITM-ENKLAVIGTACTGCGVCVEKCPFDAIEKTEEEKE 61 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAK 92 + L SEY W ++ +L K Sbjct: 62 TVDL---SEYRDVWVFAEQREGALMPVVK 87 >gi|296387990|ref|ZP_06877465.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PAb1] Length = 188 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 105 VAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMRA 162 Query: 60 EP 61 P Sbjct: 163 TP 164 >gi|117922054|ref|YP_871246.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117614386|gb|ABK49840.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 188 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPYKVRFMNPETK 114 >gi|311108198|ref|YP_003981051.1| benzoyl-CoA oxygenase/reductase BoxA [Achromobacter xylosoxidans A8] gi|310762887|gb|ADP18336.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Achromobacter xylosoxidans A8] Length = 412 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+ N + P+ C C C P CP AI Sbjct: 18 EICIRC--NTCEETCPIKAITHDSNNYVVDPEICNGCMACVPPCPTGAI 64 >gi|285019250|ref|YP_003376961.1| ferredoxin protein [Xanthomonas albilineans GPE PC73] gi|283474468|emb|CBA16969.1| putative ferredoxin protein [Xanthomonas albilineans] Length = 136 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + V+ +CI C T C++ CPVD G + + C C +C P CPVD I Sbjct: 80 VALVIEADCIGC--TKCIQACPVDAIVGGAKHMHTVLAPLCTGCALCLPACPVDCI 133 >gi|256824301|ref|YP_003148261.1| formate dehydrogenase subunit beta [Kytococcus sedentarius DSM 20547] gi|256687694|gb|ACV05496.1| formate dehydrogenase beta subunit [Kytococcus sedentarius DSM 20547] Length = 391 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C H C++VCP + E + + D C CG C CP I+ T+ Sbjct: 196 SDVCKHCTHAGCLDVCPTGALFRSEFGTVVVQADICNGCGYCVGACPFGVIERRTD 251 >gi|224370172|ref|YP_002604336.1| HdrL3 [Desulfobacterium autotrophicum HRM2] gi|223692889|gb|ACN16172.1| HdrL3 [Desulfobacterium autotrophicum HRM2] Length = 1487 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ENC C CV CP + E I P C CGVC ECP IK Sbjct: 1418 ENCAAC--LICVRSCPYNVPVINAEGVSYIDPALCQGCGVCAAECPAKTIK 1466 >gi|15644905|ref|NP_207075.1| ferredoxin [Helicobacter pylori 26695] gi|188527083|ref|YP_001909770.1| ferredoxin [Helicobacter pylori Shi470] gi|208434223|ref|YP_002265889.1| ferrodoxin [Helicobacter pylori G27] gi|210134475|ref|YP_002300914.1| ferredoxin [Helicobacter pylori P12] gi|217031497|ref|ZP_03437002.1| hypothetical protein HPB128_21g55 [Helicobacter pylori B128] gi|217033432|ref|ZP_03438862.1| hypothetical protein HP9810_1g46 [Helicobacter pylori 98-10] gi|254778980|ref|YP_003057085.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori B38] gi|298736776|ref|YP_003729306.1| ferredoxin [Helicobacter pylori B8] gi|308182451|ref|YP_003926578.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori PeCan4] gi|2313367|gb|AAD07340.1| ferredoxin [Helicobacter pylori 26695] gi|188143323|gb|ACD47740.1| ferredoxin [Helicobacter pylori Shi470] gi|208432152|gb|ACI27023.1| ferrodoxin [Helicobacter pylori G27] gi|210132443|gb|ACJ07434.1| ferredoxin [Helicobacter pylori P12] gi|216944137|gb|EEC23565.1| hypothetical protein HP9810_1g46 [Helicobacter pylori 98-10] gi|216946697|gb|EEC25293.1| hypothetical protein HPB128_21g55 [Helicobacter pylori B128] gi|254000891|emb|CAX28827.1| Putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori B38] gi|261837723|gb|ACX97489.1| ferrodoxin [Helicobacter pylori 51] gi|297379499|gb|ADI34386.1| Ferredoxin [Helicobacter pylori v225d] gi|298355970|emb|CBI66842.1| ferredoxin [Helicobacter pylori B8] gi|308061630|gb|ADO03518.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori Cuz20] gi|308064636|gb|ADO06528.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori PeCan4] gi|315586271|gb|ADU40652.1| ferredoxin [Helicobacter pylori 35A] gi|317012119|gb|ADU82727.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori Lithuania75] gi|317179328|dbj|BAJ57116.1| ferredoxin [Helicobacter pylori F30] gi|332673118|gb|AEE69935.1| ferredoxin [Helicobacter pylori 83] Length = 84 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD 58 AI PD Sbjct: 59 AILPD 63 >gi|325265417|ref|ZP_08132141.1| Fe-hydrogenase large subunit family protein [Clostridium sp. D5] gi|324029418|gb|EGB90709.1| Fe-hydrogenase large subunit family protein [Clostridium sp. D5] Length = 503 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C C EVCP F G++F I ++CI CG C+ CP DAI Sbjct: 117 YEVSNICKGCLAHPCQEVCPKGAISFVNGKSF--IDQEKCIKCGKCKSVCPYDAIAKKER 174 Query: 61 P 61 P Sbjct: 175 P 175 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 31/136 (22%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ E CI C C VCP D + E I P++C+ CG Sbjct: 147 SFIDQEKCIKC--GKCKSVCPYDAIAKKERPCKNACGVSAIGSDKYGRAFIDPEKCVSCG 204 Query: 45 VCEPECPVDAIKPDT---------EPGLELWLKINSEYATQWP-NITTKKESLPSAAKMD 94 +C CP AI + + G E+ +I + Q+ NIT + ++ +A + Sbjct: 205 MCMVSCPFGAISDKSQIFQLTNALQEGGEIVAEIAPAFVGQFGDNITPR--NIKAALQEL 262 Query: 95 GVKQKYEKYFSPNPGG 110 G + YE + G Sbjct: 263 GFSEVYEVALGADIGA 278 >gi|307133273|ref|YP_003885289.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Dickeya dadantii 3937] gi|306530802|gb|ADN00733.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Dickeya dadantii 3937] Length = 664 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ + C +VCP ++ + + ++CI C C CP AI +T+ Sbjct: 56 CRHCEDSPCAKVCPTQALVRKQDGIQLVAEKCIGCKTCVLACPFGAISVETQ 107 >gi|269139048|ref|YP_003295749.1| electron transport complex protein [Edwardsiella tarda EIB202] gi|267984709|gb|ACY84538.1| electron transport complex protein [Edwardsiella tarda EIB202] gi|304558980|gb|ADM41644.1| Electron transport complex protein RnfB [Edwardsiella tarda FL6-60] Length = 191 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD L + D+C CG+C P CP I+ Sbjct: 115 NCIGC--TKCIQSCPVDAIVGATRALHTVISDQCTGCGLCLPPCPTSCIQ 162 >gi|168238265|ref|ZP_02663323.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738104|ref|YP_002115589.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713606|gb|ACF92827.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288840|gb|EDY28213.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 287 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|330829820|ref|YP_004392772.1| hydrogenase 4 Fe-S subunit [Aeromonas veronii B565] gi|328804956|gb|AEB50155.1| Hydrogenase 4 Fe-S subunit [Aeromonas veronii B565] Length = 221 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C+H D C++VCPV+ + + + ++ CI C +C CP AI + G Sbjct: 49 VQCRHCDDAPCIKVCPVEAIRQTGDCVQLNESLCIGCNLCAVACPFGAI----QSGGSRP 104 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + + Y T P + + S PS + G++ E S PG ++ Sbjct: 105 VAVATSYDTYIP--CSIRSSNPSTSA--GLRCFGEDLLSWEPGVRS 146 >gi|323484489|ref|ZP_08089855.1| hypothetical protein HMPREF9474_01606 [Clostridium symbiosum WAL-14163] gi|323692550|ref|ZP_08106783.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] gi|323402267|gb|EGA94599.1| hypothetical protein HMPREF9474_01606 [Clostridium symbiosum WAL-14163] gi|323503416|gb|EGB19245.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] Length = 439 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 15/82 (18%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENF----LAIHPDECIDCGVCEPECP 51 V E CI C C +VCPV EGE + D C+ CGVC CP Sbjct: 290 VNMETCIGCGK--CAKVCPVLAIRMEEENPSGEGEKTGRRKAVVDKDICLGCGVCVRNCP 347 Query: 52 VDAIKPDTEPGLELWLKINSEY 73 V AI+ + P +++ +NS + Sbjct: 348 VSAIRLEKRP-VQIITPVNSTH 368 >gi|260430223|ref|ZP_05784197.1| 4Fe-4S ferredoxin, iron-sulfur binding [Citreicella sp. SE45] gi|260418695|gb|EEX11951.1| 4Fe-4S ferredoxin, iron-sulfur binding [Citreicella sp. SE45] Length = 461 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 V T C LC CV +CP + + L D C+ CG+C CP DAI D Sbjct: 309 VDTGACTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGICATVCPEDAITLD 363 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 10 ILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +LC H T C+++CP + + I P C CG C CP A+ D P Sbjct: 79 LLCAHSRAGQTGCTRCLDLCPTGAILPDGDHVTIDPMICAGCGACSAACPSGAVSYDAPP 138 >gi|168704743|ref|ZP_02737020.1| Ferredoxin [Gemmata obscuriglobus UQM 2246] Length = 67 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C DCV VCPV C G P +C+ C +CE CP DAI+ Sbjct: 7 LPVLLDARCIGCG--DCVAVCPVGCLAMAGPRPWLPRPRDCVSCSLCELVCPADAIE 61 >gi|168261433|ref|ZP_02683406.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349505|gb|EDZ36136.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 287 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|168232096|ref|ZP_02657154.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472499|ref|ZP_03078483.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458863|gb|EDX47702.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333575|gb|EDZ20339.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 287 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQEDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|326402930|ref|YP_004283011.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] gi|325049791|dbj|BAJ80129.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] Length = 170 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 20/90 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC EG F I+ CI CG CE CP AI+ Sbjct: 49 ERCVSCYL--CAVACPVDCISLQKTEAEGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ- 105 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ SEY Q N+ +KE L Sbjct: 106 -LTPDFEM-----SEYDRQ--NLVYEKEHL 127 >gi|317008927|gb|ADU79507.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori India7] Length = 84 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 12/81 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACDA--CREECPSEAIEEGDPIYHIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD---TEPGLELWLKINS 71 AI PD E EL K S Sbjct: 59 AILPDPNNAESKEELKYKYES 79 >gi|317483797|ref|ZP_07942737.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924900|gb|EFV46046.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 419 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Query: 17 CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C +VCPV+ + G+ F + P+ CI CGVC C + + P Sbjct: 296 CEKVCPVNAIHMEDGPAGKRFAFVDPERCIGCGVCVRSCAFGQLTLEARP 345 Score = 34.3 bits (77), Expect = 5.0, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 NF+A ++C CG CE CPV+AI + P Sbjct: 281 NFIARAGNDCRGCGKCEKVCPVNAIHMEDGPA 312 >gi|310658217|ref|YP_003935938.1| [fe] hydrogenase, electron-transfer subunit [Clostridium sticklandii DSM 519] gi|308824995|emb|CBH21033.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium sticklandii] Length = 625 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y++ E CI C T C +VCPV C + + I ++CI CG C CPV+AI Sbjct: 568 LKYMINEEKCIGC--TKCAKVCPVSCISGKVKEKHVIDQNQCIKCGACFDACPVNAI 622 >gi|317055121|ref|YP_004103588.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein [Ruminococcus albus 7] gi|315447390|gb|ADU20954.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Ruminococcus albus 7] Length = 410 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 8/63 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDE--CIDCGVCEPECPV-DAIKPD 58 V ++C C + C+ CP +C +GE FL + DE C+DCG C CPV K D Sbjct: 7 VKKDC--CGCSACMNSCPRNCITMQPDGEGFLYPNVDEKLCVDCGRCVNVCPVLKEKKTD 64 Query: 59 TEP 61 +P Sbjct: 65 NKP 67 >gi|134299396|ref|YP_001112892.1| electron transfer flavoprotein subunit beta [Desulfotomaculum reducens MI-1] gi|134052096|gb|ABO50067.1| electron transfer flavoprotein beta-subunit [Desulfotomaculum reducens MI-1] Length = 439 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ C+ C+ C+ CP + F + P++C+DCG C CPV+A+ Sbjct: 1 MAVKVSSACMGCQA--CITSCPHEALFMNDAGVCQVIPEKCVDCGECVEVCPVEAL 54 >gi|260913421|ref|ZP_05919900.1| anaerobic dimethyl sulfoxide reductase [Pasteurella dagmatis ATCC 43325] gi|260632495|gb|EEX50667.1| anaerobic dimethyl sulfoxide reductase [Pasteurella dagmatis ATCC 43325] Length = 205 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV VCP ++ + F+ ++ D CI C C CP DA + D Sbjct: 59 FSYYMSISCNHCDNPACVTVCPTGAMHKNADGFVIVNEDICIGCRYCHMACPYDAPQYDV 118 Query: 60 EPG 62 G Sbjct: 119 VKG 121 >gi|255525440|ref|ZP_05392378.1| nitroreductase [Clostridium carboxidivorans P7] gi|296187867|ref|ZP_06856261.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255510907|gb|EET87209.1| nitroreductase [Clostridium carboxidivorans P7] gi|296047824|gb|EFG87264.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 268 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E CI C CV CP+ GEN I+ D C+ CG C CP +AI P L Sbjct: 9 EKCIKC--GACVMECPISILRMGENGPEEIYEDRCMSCGHCVAVCPKEAIDNKKSP---L 63 Query: 66 WLKINSEYATQ 76 +++N++ T+ Sbjct: 64 SMQVNAKNLTR 74 >gi|254517435|ref|ZP_05129491.1| ferredoxin [Clostridium sp. 7_2_43FAA] gi|226911184|gb|EEH96385.1| ferredoxin [Clostridium sp. 7_2_43FAA] Length = 56 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M + + ++C+ C C CPV+ +G+ I D CIDCG C CPV A Sbjct: 1 MAFKIEDSCVNCGA--CAAECPVNAISQGDTQFVIDEDTCIDCGNCANVCPVGA 52 >gi|91978474|ref|YP_571133.1| thiamine pyrophosphate enzyme-like TPP-binding [Rhodopseudomonas palustris BisB5] gi|91684930|gb|ABE41232.1| thiamine pyrophosphate enzyme-like TPP-binding [Rhodopseudomonas palustris BisB5] Length = 607 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C + C + D ++EG + + I P CI C +C C +D IK T P Sbjct: 552 CQSCMNLGCPALTWSDEWFEGRHRVKIDPASCIGCTLCAQVCTIDCIKIATPP 604 >gi|166712771|ref|ZP_02243978.1| ferredoxin [Xanthomonas oryzae pv. oryzicola BLS256] Length = 142 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 83 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIQ 137 >gi|56412594|ref|YP_149669.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361529|ref|YP_002141165.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126851|gb|AAV76357.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093005|emb|CAR58438.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 287 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 25/118 (21%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 L LW +S+Y ++ +I ++ + A + G+ +Y P K+ Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPGWSFKHV 142 >gi|83590042|ref|YP_430051.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572956|gb|ABC19508.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 1487 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 VV EN C C CV VCP + E N I+ +C+ CG C ECP AI+ Sbjct: 1415 VVDENKCAAC--LTCVRVCPFNVPRINERNVAEINAVQCMGCGTCAGECPAKAIQ 1467 >gi|88808579|ref|ZP_01124089.1| ferredoxin [Synechococcus sp. WH 7805] gi|88787567|gb|EAR18724.1| ferredoxin [Synechococcus sp. WH 7805] Length = 74 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVDA 54 DCV+ CPV C +G +F I + CIDCG+C CPVD Sbjct: 14 ADCVDACPVACIQPGKGKNKKGTDFYWIDFETCIDCGICLQVCPVDG 60 >gi|113971773|ref|YP_735566.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886457|gb|ABI40509.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 188 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPYKVRFMNPETK 114 >gi|296313314|ref|ZP_06863255.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria polysaccharea ATCC 43768] gi|296840194|gb|EFH24132.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria polysaccharea ATCC 43768] Length = 279 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|161170223|gb|ABX59194.1| FeS cluster containing hydrogenase components 1 [uncultured marine group II euryarchaeote EF100_57A08] Length = 470 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + D CI C C CP DA+ D G Sbjct: 58 CNHCEDSPCTTICPTTALFTREDGIVDFDDDRCIGCKSCMQACPYDALYIDPNKG 112 >gi|254361807|ref|ZP_04977942.1| tetrathionate reductase subunit B [Mannheimia haemolytica PHL213] gi|261491590|ref|ZP_05988173.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494950|ref|ZP_05991419.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093342|gb|EDN74338.1| tetrathionate reductase subunit B [Mannheimia haemolytica PHL213] gi|261309359|gb|EEY10593.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312716|gb|EEY13836.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 242 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + I+ ++CI CG C CP DA Sbjct: 97 LCNHCDQPPCVPVCPVQATFQRKDGVVVINNEQCIGCGYCVQACPYDA 144 >gi|158520473|ref|YP_001528343.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509299|gb|ABW66266.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 361 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C C+ C ++CP++ ++ + CI CGVC CP DA+ Sbjct: 295 VDADTCTGCEA--CADICPMEAIEMKDDIAHVSDSRCIGCGVCAYHCPADAL 344 >gi|54298873|ref|YP_125242.1| hypothetical protein lpp2940 [Legionella pneumophila str. Paris] gi|53752658|emb|CAH14093.1| hypothetical protein lpp2940 [Legionella pneumophila str. Paris] Length = 204 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C T C++ CPVD + AI EC CG+C CPVD I+ + P Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIIAHECTGCGLCVDPCPVDCIEMVSLPA 136 >gi|148260117|ref|YP_001234244.1| NADH-quinone oxidoreductase, chain I [Acidiphilium cryptum JF-5] gi|146401798|gb|ABQ30325.1| NADH dehydrogenase subunit I [Acidiphilium cryptum JF-5] Length = 170 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 20/90 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC EG F I+ CI CG CE CP AI+ Sbjct: 49 ERCVSCYL--CAVACPVDCISLQKTEAEGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ- 105 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ SEY Q N+ +KE L Sbjct: 106 -LTPDFEM-----SEYDRQ--NLVYEKEHL 127 >gi|307822808|ref|ZP_07653039.1| NADH-quinone oxidoreductase, chain I [Methylobacter tundripaludum SV96] gi|307736412|gb|EFO07258.1| NADH-quinone oxidoreductase, chain I [Methylobacter tundripaludum SV96] Length = 171 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E EN F I+ CI CG CE CP +AI+ Sbjct: 49 ERCVACNL--CAVACPVDCIVLQKAEDENGRWYPEFFRINFSRCIMCGFCEEACPTNAIQ 106 Query: 57 --PDTE 60 PD E Sbjct: 107 LTPDFE 112 >gi|262372076|ref|ZP_06065355.1| electron transport complex protein [Acinetobacter junii SH205] gi|262312101|gb|EEY93186.1| electron transport complex protein [Acinetobacter junii SH205] Length = 266 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-- 56 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 86 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCIDLV 143 Query: 57 PDTEP 61 PD P Sbjct: 144 PDNNP 148 >gi|256810211|ref|YP_003127580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793411|gb|ACV24080.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 390 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C CVEVCP D + EN + + P C CG+C CPV+A++ D + Sbjct: 202 VEAEKCIYC--LKCVEVCPGDMIKVDNENMIVVPPKSCPACGLCVNICPVNALELDVK 257 >gi|213579914|ref|ZP_03361740.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 259 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|170759324|ref|YP_001787173.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A3 str. Loch Maree] gi|169406313|gb|ACA54724.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A3 str. Loch Maree] Length = 631 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|124028465|ref|YP_001013785.1| indolepyruvate oxidoreductase subunit iorA [Hyperthermus butylicus DSM 5456] gi|123979159|gb|ABM81440.1| indolepyruvate oxidoreductase subunit iorA [Hyperthermus butylicus DSM 5456] Length = 651 Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV E C C CP + + P C CGVC CP A KP ++P Sbjct: 580 YVDEEKCTACGICYTAFNCPA-IRRRPDGKAMVDPALCTGCGVCAQVCPFGAFKP-SQPP 637 Query: 63 LELWLKI 69 E WLKI Sbjct: 638 SEEWLKI 644 >gi|160872682|ref|ZP_02062814.1| iron-sulfur cluster binding protein [Rickettsiella grylli] gi|159121481|gb|EDP46819.1| iron-sulfur cluster binding protein [Rickettsiella grylli] Length = 217 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 MT + E+ CI C T C++ CPVD + + EC CG+C CPVD I Sbjct: 88 MTARIRESECIGC--TKCIQACPVDAIVGAAKQLHVVLKQECTGCGLCIAPCPVDCI 142 >gi|15644044|ref|NP_229093.1| ferredoxin [Thermotoga maritima MSB8] gi|170289313|ref|YP_001739551.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga sp. RQ2] gi|4981847|gb|AAD36363.1|AE001784_5 ferredoxin [Thermotoga maritima MSB8] gi|170176816|gb|ACB09868.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga sp. RQ2] Length = 95 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTE 60 V C+ C +CV+VCPV+ EN A+ + +CI CG C CPV AI+P+ E Sbjct: 4 VNSKCVGC--GNCVKVCPVEGAIRIENGKAVIDNYKCIRCGKCFDACPVGAIRPNYE 58 >gi|224588326|gb|ACN58950.1| iron-sulfur cluster-binding protein [uncultured bacterium BLR10] Length = 245 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI--KP 57 + Y+ CI C T C++ CPVD + + PD C C +C CPVD I P Sbjct: 79 VAYIDESLCIGC--TLCIQACPVDAIIGAAKLMHTVVPDLCTGCDLCVNPCPVDCIVMHP 136 Query: 58 DTE-PGLELWLKINSEYATQ 76 TE G W + +++ A + Sbjct: 137 VTETTGWNAWRQADADAARE 156 >gi|187779551|ref|ZP_02996024.1| hypothetical protein CLOSPO_03147 [Clostridium sporogenes ATCC 15579] gi|187773176|gb|EDU36978.1| hypothetical protein CLOSPO_03147 [Clostridium sporogenes ATCC 15579] Length = 631 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|52549490|gb|AAU83339.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured archaeon GZfos27E7] Length = 267 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C E+C VD I D+CI CG C CP +A+ +TE G +W+ N Sbjct: 126 CAELCRVDAISIVLGKSVIDSDKCISCGWCIRGCPHEAV-IETERGYTMWIGGN 178 >gi|227496205|ref|ZP_03926509.1| formate dehydrogenase beta subunit [Actinomyces urogenitalis DSM 15434] gi|226834258|gb|EEH66641.1| formate dehydrogenase beta subunit [Actinomyces urogenitalis DSM 15434] Length = 348 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 152 SDVCKHCTHAGCLDVCPTGALFRSEFGSVVVQADVCNGCGYCVAACPFGVI 202 >gi|188587655|ref|YP_001920981.1| nitroreductase family protein fused to ferredoxin domain [Clostridium botulinum E3 str. Alaska E43] gi|188497936|gb|ACD51072.1| nitroreductase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 273 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 2/113 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V E CI CK C+ CPV + I + CI CG C CP A+ D Sbjct: 1 MFEVNKEKCISCKQ--CINDCPVSDILLIDGKANIKNESCIKCGHCIAICPTKAVSTDDY 58 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 E+ SE++ + N+ + S K +K + EK G+ T Sbjct: 59 NMDEVKEYNKSEFSIESDNLLNFIKFRRSVRKFKDIKVEKEKIRKIIEAGRFT 111 >gi|168180426|ref|ZP_02615090.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum NCTC 2916] gi|226949092|ref|YP_002804183.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A2 str. Kyoto] gi|182668703|gb|EDT80681.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum NCTC 2916] gi|226842684|gb|ACO85350.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A2 str. Kyoto] Length = 631 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|160942972|ref|ZP_02090210.1| hypothetical protein FAEPRAM212_00449 [Faecalibacterium prausnitzii M21/2] gi|158445666|gb|EDP22669.1| hypothetical protein FAEPRAM212_00449 [Faecalibacterium prausnitzii M21/2] Length = 538 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 142 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQDKCIKCGRCVTVCPYNAIVKTERP 198 >gi|119873478|ref|YP_931485.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674886|gb|ABL89142.1| formate dehydrogenase beta subunit [Pyrobaculum islandicum DSM 4184] Length = 278 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 NC+ C C CPV E + I+ DEC+ CG C+ CP D K Sbjct: 94 NCMHCVEAPCARACPVGAIKVTPEGAVVINRDECVGCGYCQMACPYDVPK 143 >gi|325205297|gb|ADZ00750.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M04-240196] Length = 279 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|254805750|ref|YP_003083971.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|254669291|emb|CBA08254.1| putative ferredoxin [Neisseria meningitidis alpha14] Length = 279 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|159905551|ref|YP_001549213.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Methanococcus maripaludis C6] gi|159887044|gb|ABX01981.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanococcus maripaludis C6] Length = 85 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C++ C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCEN--CYIFCPEGCIQEKDGKFEIDYDYCKGCRICEKECPVKAIKTERE 83 >gi|20089354|ref|NP_615429.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19914246|gb|AAM03909.1| ferredoxin [Methanosarcina acetivorans C2A] Length = 59 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C CVE CPV+ E + DEC+DCG CE CPV AIK Sbjct: 8 EECTACGT--CVEECPVEAIVIDEDAGCAVVDEDECVDCGACEEACPVGAIK 57 >gi|304314083|ref|YP_003849230.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] gi|302587542|gb|ADL57917.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] Length = 143 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%) Query: 10 ILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I C H C+ +CP D E + + I D+CI CG+C CP+ AI + E G+ Sbjct: 34 IFCMHCAPERAPCLNICPEDAIVEVDGAVVILEDKCIGCGLCRDACPIGAITIN-ERGVA 92 Query: 65 LWLKINSEYATQWPNITTKKESLPS------AAKMDGVKQKYEKY 103 + + + + K++L AAK D + ++++ Sbjct: 93 VKCDLCVDREKPLCVMVCPKKALSESSEDIMAAKRDKITGEFKRL 137 >gi|41582337|gb|AAS07951.1| NADH-quinone oxidoreductase, chain I [uncultured marine bacterium 463] Length = 175 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC + F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQGVKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 Query: 57 --PDTE 60 PD E Sbjct: 111 LTPDFE 116 >gi|325145280|gb|EGC67558.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240013] Length = 279 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|289676762|ref|ZP_06497652.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae FF5] Length = 291 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGASRLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|188587083|ref|YP_001918628.1| glycyl-radical enzyme activating protein family [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351770|gb|ACB86040.1| glycyl-radical enzyme activating protein family [Natranaerobius thermophilus JW/NM-WN-LF] Length = 310 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Query: 7 ENCILCKHTDCV------EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E+ +L H C+ E+CP + + +N I+ ++C C +C+ CPV+AI+ Sbjct: 54 ESQLLIHHNSCMDCGLCQEICPENAIFTEQNSTQINQEKCKKCSICQESCPVNAIE 109 >gi|163858985|ref|YP_001633283.1| iron-sulfur cluster-binding protein [Bordetella petrii DSM 12804] gi|163262713|emb|CAP45016.1| iron-sulfur cluster-binding protein [Bordetella petrii] Length = 698 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 V + C LC CV CP + L C+ CG+CE CP DAI+ Sbjct: 564 VDAQACTLC--MSCVSACPAHALQDNPQLPQLRFIEKNCVQCGLCEKTCPEDAIQ 616 >gi|120603320|ref|YP_967720.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio vulgaris DP4] gi|120563549|gb|ABM29293.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfovibrio vulgaris DP4] Length = 170 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C + CP + + + + + CI CG C CPVDA+ D E GL Sbjct: 54 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGL 109 >gi|254481086|ref|ZP_05094332.1| NADH-quinone oxidoreductase, chain I subfamily, putative [marine gamma proteobacterium HTCC2148] gi|214038881|gb|EEB79542.1| NADH-quinone oxidoreductase, chain I subfamily, putative [marine gamma proteobacterium HTCC2148] Length = 175 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC + F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQGVKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 Query: 57 --PDTE 60 PD E Sbjct: 111 LTPDFE 116 >gi|154148497|ref|YP_001407281.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter hominis ATCC BAA-381] gi|153804506|gb|ABS51513.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter hominis ATCC BAA-381] Length = 188 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 T +C++C+++ CVEVCP ++ EN + I+ + C+ C C CP DA Sbjct: 51 TDFTRHSCVMCENSPCVEVCPTGASFKTENGITLINHNLCVSCKYCILACPYDA 104 >gi|153941131|ref|YP_001391108.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum F str. Langeland] gi|152937027|gb|ABS42525.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum F str. Langeland] gi|295319154|gb|ADF99531.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum F str. 230613] Length = 631 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|158522835|ref|YP_001530705.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] gi|158511661|gb|ABW68628.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] Length = 699 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 14 HTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 + DC++ C D GE+ + + P +C+ CG CE CP + I+ T Sbjct: 140 YGDCIKACAFDAIVMGEDGYPVVDPAKCVGCGACEAVCPKNIIRVKT 186 >gi|119719691|ref|YP_920186.1| thiamine pyrophosphate binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524811|gb|ABL78183.1| indolepyruvate ferredoxin oxidoreductase, subunit iorA [Thermofilum pendens Hrk 5] Length = 623 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 3 YVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 YV E C+ C CV+ CP E + + I P+ C+ CGVC CP AI P Sbjct: 564 YVDQERCVRCG--ICVDKFSCPA-IVREEDGRVVILPEVCVGCGVCATICPAKAIHP 617 >gi|52843076|ref|YP_096875.1| iron-sulfur cluster binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630187|gb|AAU28928.1| iron-sulfur cluster binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 204 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C T C++ CPVD + AI EC CG+C CPVD I+ + P Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIEMVSLPA 136 >gi|89896878|ref|YP_520365.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336326|dbj|BAE85921.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 231 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 LC H D CV CP Y+ + L +H P++CI C C CP + I + + W Sbjct: 57 LCNHCDQAACVRACPTKAMYKDDKGLTLHNPNKCIGCKSCMLACPYEVINYNAKEPHGHW 116 Query: 67 ---LKINSEYATQWPNITTK-KESLP-----SAAKMDGVKQK 99 + + ++ T K E +P AA DG++ K Sbjct: 117 RDKISVIAQCTTNGAETAEKVGEKIPYYNPDRAATYDGIRPK 158 >gi|308270150|emb|CBX26762.1| Ferredoxin-2 [uncultured Desulfobacterium sp.] Length = 95 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%) Query: 6 TENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG-- 62 T+ CI C C+EVCP F G+ + + D C++CG C CP AI D+ G Sbjct: 17 TKKCIGCGR--CLEVCPHQVFSLAGKKAIITNFDACMECGACAINCPSTAIFVDSGVGCA 74 Query: 63 ---LELWLKINSEYATQ 76 + W++ + T Sbjct: 75 TGLINEWIRDQKFFRTH 91 >gi|134100101|ref|YP_001105762.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291002905|ref|ZP_06560878.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133912724|emb|CAM02837.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 300 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++ C C H C++VCP + E + + D C CG C P CP I D PG Sbjct: 120 SDVCKHCTHAACLDVCPTGALFRTEYGTVVVQDDVCNGCGYCVPACPYGVI--DIRPGDG 177 Query: 65 LWLKINSEYATQWPNIT 81 K Y Q + Sbjct: 178 GAFKCTMCYDRQGARLA 194 >gi|15922102|ref|NP_377771.1| anaerobic dimethyl sulfoxide reductase [Sulfolobus tokodaii str. 7] gi|15622890|dbj|BAB66880.1| 391aa long hypothetical anaerobic dimethyl sulfoxide reductase [Sulfolobus tokodaii str. 7] Length = 391 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C++ C++VCP + ++ + + I+ +ECI CG C+ CP + K + E Sbjct: 51 CNHCENPLCMKVCPANAIHKDDMGIVYINGNECIGCGYCQWACPYEEPKFNHE 103 >gi|329936419|ref|ZP_08286184.1| ferredoxin iron-sulfur binding domain protein [Streptomyces griseoaurantiacus M045] gi|329304215|gb|EGG48096.1| ferredoxin iron-sulfur binding domain protein [Streptomyces griseoaurantiacus M045] Length = 337 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 ++ C C H C++VCP + E + + D C CG C P CP I +PD Sbjct: 148 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQEDVCNGCGYCVPACPYGVIEQRPD 203 >gi|254496015|ref|ZP_05108918.1| iron-sulfur cluster binding protein [Legionella drancourtii LLAP12] gi|254354764|gb|EET13396.1| iron-sulfur cluster binding protein [Legionella drancourtii LLAP12] Length = 204 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD G+ A+ EC CG+C CPVD I Sbjct: 84 CIGC--TKCIKACPVDAIIGSGKLMHAVIAHECTGCGLCVAPCPVDCI 129 >gi|254491482|ref|ZP_05104661.1| 4Fe-4S binding domain protein [Methylophaga thiooxidans DMS010] gi|224462960|gb|EEF79230.1| 4Fe-4S binding domain protein [Methylophaga thiooxydans DMS010] Length = 517 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 + C LC CV VCPV +G + L D C+ CG+C+ CP DAI Sbjct: 393 QACTLC--MSCVSVCPVGAVVDGVDKPQLNFIEDLCVQCGICDTACPEDAI 441 >gi|168184520|ref|ZP_02619184.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Bf] gi|237795252|ref|YP_002862804.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum Ba4 str. 657] gi|182672370|gb|EDT84331.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Bf] gi|229262705|gb|ACQ53738.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Ba4 str. 657] Length = 631 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|257437704|ref|ZP_05613459.1| conserved domain protein [Faecalibacterium prausnitzii A2-165] gi|257200011|gb|EEU98295.1| conserved domain protein [Faecalibacterium prausnitzii A2-165] Length = 56 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV ++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCGA--CEGACPVGAVTIENGVAVVNADACIDCGACEGACPTGAIAAE 56 >gi|16761442|ref|NP_457059.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140861|ref|NP_804203.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213026884|ref|ZP_03341331.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213163416|ref|ZP_03349126.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213649659|ref|ZP_03379712.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857323|ref|ZP_03384294.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25512770|pir||AF0822 probable polyferredoxin STY2772 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503742|emb|CAD02730.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi] gi|29136486|gb|AAO68052.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 287 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 25/118 (21%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 L LW +S+Y ++ +I ++ + A + G+ +Y P K+ Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPGWSFKHV 142 >gi|307155160|ref|YP_003890544.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306985388|gb|ADN17269.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7822] Length = 75 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 10/66 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV+ CPV C + +G ++ I CIDCG+C CPV+ AI Sbjct: 5 IVTETCE--GVADCVKACPVACIHPGPGKNIKGTDWFWIDFATCIDCGICLSVCPVEGAI 62 Query: 56 KPDTEP 61 P+ P Sbjct: 63 IPEERP 68 >gi|55378121|ref|YP_135971.1| formate dehydrogenase-O iron-sulfur subunit [Haloarcula marismortui ATCC 43049] gi|55230846|gb|AAV46265.1| formate dehydrogenase-O iron-sulfur subunit [Haloarcula marismortui ATCC 43049] Length = 220 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK-PDTEP 61 V C C + CV VCP D EN F+ + D CI C C CP A + PD + Sbjct: 84 AVPMQCYHCSNAPCVSVCPTDSLISKENGFVRVRDDLCIGCQYCLSACPFGAPQFPDEDS 143 Query: 62 GL 63 G+ Sbjct: 144 GV 145 >gi|261391743|emb|CAX49192.1| putative ferredoxin [Neisseria meningitidis 8013] gi|325197493|gb|ADY92949.1| iron-sulfur cluster-binding protein [Neisseria meningitidis G2136] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|147920950|ref|YP_685242.1| pyruvate:ferredoxin oxidoreductase, delta subunit [uncultured methanogenic archaeon RC-I] gi|110620638|emb|CAJ35916.1| pyruvate:ferredoxin oxidoreductase, delta subunit [uncultured methanogenic archaeon RC-I] Length = 95 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKHT--DCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + E CI CK C + P +C ++G+ I+ D C CGVC ECPVDAI+ E Sbjct: 34 ISQEKCIGCKRCADSCPDGAPFECAHDGKKKKFCINYDYCKGCGVCAYECPVDAIEMVVE 93 >gi|59711966|ref|YP_204742.1| formate dehydrogenase N, beta subunit [Vibrio fischeri ES114] gi|197334851|ref|YP_002156159.1| formate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] gi|59480067|gb|AAW85854.1| formate dehydrogenase N, beta subunit [Vibrio fischeri ES114] gi|197316341|gb|ACH65788.1| formate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] Length = 202 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 ++ C+ C C VCP DCF E+ + H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCKAVCPADCFEHTEDGIVRHNKDLCIGCGYCLFACPFGA 103 >gi|328952049|ref|YP_004369383.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452373|gb|AEB08202.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1014 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV CP D F + + I P +C CGVC ECP AI+ Sbjct: 953 CVRACPFDVPFINDKGYSEIDPAKCHGCGVCAAECPAKAIQ 993 >gi|319411308|emb|CBY91719.1| putative ferredoxin [Neisseria meningitidis WUE 2594] gi|325130942|gb|EGC53669.1| iron-sulfur cluster-binding protein [Neisseria meningitidis OX99.30304] gi|325135016|gb|EGC57644.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M13399] gi|325137038|gb|EGC59634.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M0579] gi|325202960|gb|ADY98414.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240149] gi|325207242|gb|ADZ02694.1| iron-sulfur cluster-binding protein [Neisseria meningitidis NZ-05/33] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|304389020|ref|ZP_07371066.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] gi|304337001|gb|EFM03189.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|254670133|emb|CBA05130.1| putative ferredoxin [Neisseria meningitidis alpha153] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|170754983|ref|YP_001781396.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum B1 str. Okra] gi|169120195|gb|ACA44031.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum B1 str. Okra] Length = 631 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|121634081|ref|YP_974326.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|120865787|emb|CAM09516.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|325133026|gb|EGC55699.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M6190] gi|325139098|gb|EGC61644.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ES14902] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|160878251|ref|YP_001557219.1| ferredoxin hydrogenase [Clostridium phytofermentans ISDg] gi|160426917|gb|ABX40480.1| Ferredoxin hydrogenase [Clostridium phytofermentans ISDg] Length = 484 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+NC C C + C + I P +C +CG+C CP +AI P Sbjct: 95 FLVTDNCQKCMGKRCQKACNFQAISMSHDRAHIDPAKCKECGMCASACPYNAIADLKRP 153 >gi|15676135|ref|NP_273266.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis MC58] gi|7225430|gb|AAF40665.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58] gi|316985127|gb|EFV64079.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria meningitidis H44/76] gi|325199417|gb|ADY94872.1| iron-sulfur cluster-binding protein [Neisseria meningitidis H44/76] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|325129008|gb|EGC51858.1| iron-sulfur cluster-binding protein [Neisseria meningitidis N1568] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|310825956|ref|YP_003958313.1| hypothetical protein ELI_0331 [Eubacterium limosum KIST612] gi|308737690|gb|ADO35350.1| hypothetical protein ELI_0331 [Eubacterium limosum KIST612] Length = 139 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +TE CI C T C CPV E + ++ CIDCGVC CP AI Sbjct: 1 MAYTITEKCIGC--TICARNCPVMAITGEKKKQHVVNDKRCIDCGVCGRSCPQAAI 54 >gi|292492181|ref|YP_003527620.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] gi|291580776|gb|ADE15233.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] Length = 180 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKAEDEQGRWYPEFFRINFSRCIFCGLCEEACPTYAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 116 LTPDFEMG---------EYERQ--NLVYEKEDL 137 >gi|260910260|ref|ZP_05916937.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635764|gb|EEX53777.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 55 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ +CI C C+ CPV+ EG+ + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACGT--CLPECPVEAISEGDIY-KIDADACTECGTCASVCPSEAIS 53 >gi|254673479|emb|CBA08875.1| putative ferredoxin [Neisseria meningitidis alpha275] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|92114035|ref|YP_573963.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91797125|gb|ABE59264.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 552 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAI 55 T+NC LC CV VCP A++ E C+ CG+CE CP I Sbjct: 417 TDNCTLC--MACVAVCPTQALSSPGQSPALNFQESACVQCGLCETACPEQVI 466 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 LC H T C++VCP D + + I P C G C CP AI+ Sbjct: 182 LCAHAGRGQSGCTRCLDVCPADAISSVKQEIVIDPFRCHGAGSCTSACPTGAIR 235 >gi|218767102|ref|YP_002341614.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|121051110|emb|CAM07381.1| putative ferredoxin [Neisseria meningitidis Z2491] Length = 279 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|328952814|ref|YP_004370148.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453138|gb|AEB08967.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1029 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD--TE 60 + + NC C C+ +CP GE IH + C CG+C +CP AI TE Sbjct: 952 IRSPNCRRC--LSCLAICPFGAVSLGEKGRPTIHVELCRGCGLCAAQCPAQAISMSRLTE 1009 Query: 61 PGLE 64 P LE Sbjct: 1010 PELE 1013 >gi|325141137|gb|EGC63638.1| iron-sulfur cluster-binding protein [Neisseria meningitidis CU385] Length = 279 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|317500246|ref|ZP_07958476.1| Fe-hydrogenase large subunit family protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331087521|ref|ZP_08336454.1| hypothetical protein HMPREF1025_00037 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898372|gb|EFV20413.1| Fe-hydrogenase large subunit family protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330404066|gb|EGG83615.1| hypothetical protein HMPREF1025_00037 [Lachnospiraceae bacterium 3_1_46FAA] Length = 503 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNICKGCLAHPCQEVCPKDAISMVNGRSYIDQEKCIKCGKCKSVCPYDAIAKKERP 175 >gi|308388428|gb|ADO30748.1| putative ferredoxin [Neisseria meningitidis alpha710] Length = 279 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|311232944|gb|ADP85798.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris RCH1] Length = 170 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C + CP + + + + + CI CG C CPVDA+ D E GL Sbjct: 54 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGL 109 >gi|323141624|ref|ZP_08076506.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413889|gb|EFY04726.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 459 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 CV++CP + I D CIDCG C CP A +K DT GL Sbjct: 23 VSCVKLCPTEAIRVRNGKAEILGDRCIDCGACAAGCPYHAFNVKTDTLEGL 73 >gi|148379808|ref|YP_001254349.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 3502] gi|153931627|ref|YP_001384106.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 19397] gi|153936195|ref|YP_001387646.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. Hall] gi|148289292|emb|CAL83388.1| putative electron-transferring subunit of iron-only hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152927671|gb|ABS33171.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 19397] gi|152932109|gb|ABS37608.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A str. Hall] Length = 631 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSACPVGAI 628 >gi|325203327|gb|ADY98780.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240355] Length = 279 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCI 124 >gi|83312388|ref|YP_422652.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82947229|dbj|BAE52093.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 242 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 TYV+ C C CV VCPV F + + + + D C+ C C CP DA Sbjct: 90 TYVLPRLCNHCSDPPCVGVCPVGATFQQKDGAVMVDSDRCVGCAYCVQACPYDA 143 >gi|327400970|ref|YP_004341809.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316478|gb|AEA47094.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 127 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C C+ +CPV+ GE + I+ +CI CG C CPV A+K Sbjct: 77 EKCIHC--GACISICPVEAIELNGEKKVVINASKCIHCGNCVNVCPVKALK 125 >gi|254475789|ref|ZP_05089175.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214030032|gb|EEB70867.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 649 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 3 YVVTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV +E +LC H T C++VCP + ++I P C CG C CP A Sbjct: 260 YVRSEP-LLCAHSRAGQTGCTRCLDVCPTGAISPDGDHVSIDPMICAGCGSCASLCPSGA 318 Query: 55 IKPDTEP 61 I D P Sbjct: 319 ITYDAPP 325 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V ++ C LC CV +CP + + L D C+ CG+C CP +AI EP Sbjct: 496 VASDKCTLC--LSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPENAIS--YEP 551 Query: 62 GLEL 65 L L Sbjct: 552 RLNL 555 >gi|219853264|ref|YP_002467696.1| glutamate synthase (NADPH) [Methanosphaerula palustris E1-9c] gi|219547523|gb|ACL17973.1| Glutamate synthase (NADPH) [Methanosphaerula palustris E1-9c] Length = 502 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEP 61 ++ C+LC CV+ C F + E +AI +P C C C CP DAI +P Sbjct: 15 SDQCMLCGR--CVDNCSYGVFQKEEERIAIVNPRNCTACHRCIAMCPRDAISLKEKP 69 >gi|153814717|ref|ZP_01967385.1| hypothetical protein RUMTOR_00932 [Ruminococcus torques ATCC 27756] gi|145847748|gb|EDK24666.1| hypothetical protein RUMTOR_00932 [Ruminococcus torques ATCC 27756] Length = 503 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNICKGCLAHPCQEVCPKDAISMVNGRSYIDQEKCIKCGKCKSVCPYDAIAKKERP 175 >gi|327400615|ref|YP_004341454.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316123|gb|AEA46739.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 184 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C++VCP+D Y+ + + ++ D CI CG C CP A Sbjct: 55 CMHCSDPACLKVCPMDAIYKRSDGIVLVNKDNCIGCGYCSYACPFGA 101 >gi|225181056|ref|ZP_03734503.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168253|gb|EEG77057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 416 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C CV+ CPVD + E I + C+ CGVC +CP A+ Sbjct: 286 VLEGCTGCGK--CVQACPVDAIGVTDKEEKKAQIDTEYCLGCGVCTVQCPTKAL 337 >gi|15679728|ref|NP_276846.1| formate hydrogenlyase, iron-sulfur subunit 2 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622867|gb|AAB86206.1| formate hydrogenlyase, iron-sulfur subunit 2 [Methanothermobacter thermautotrophicus str. Delta H] Length = 143 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ +CP D E + + I D CI CG+C CPV AI Sbjct: 46 CLNICPEDAIVEVDGAVVILEDRCIGCGLCRDACPVGAI 84 >gi|110634782|ref|YP_674990.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110285766|gb|ABG63825.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 680 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV CP + E+ A++ E C+ CG+C CP I + Sbjct: 519 VDVEGCTLC--LSCVSACPTGALSDSEDRPALYFSESACVQCGLCAATCPEQVITLVPQV 576 Query: 62 GLELW 66 + W Sbjct: 577 DFQAW 581 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 11/65 (16%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDT 59 LC H T C+++CP N +AI + C CG C CP A PD Sbjct: 276 LCAHSRSRITGCTRCLDLCPTGAITPAGNHVAIDAEICAGCGNCAAVCPTGAAAYAIPDA 335 Query: 60 EPGLE 64 E L+ Sbjct: 336 ETLLQ 340 >gi|71274587|ref|ZP_00650875.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Dixon] gi|71898126|ref|ZP_00680312.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|170730849|ref|YP_001776282.1| ferredoxin [Xylella fastidiosa M12] gi|71164319|gb|EAO14033.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Dixon] gi|71732100|gb|EAO34156.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|167965642|gb|ACA12652.1| ferredoxin II [Xylella fastidiosa M12] Length = 139 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 81 VAWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 135 >gi|213425327|ref|ZP_03358077.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 281 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 19/109 (17%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DT------- 59 C +VCP F + ++I CI CG C CPVDA IKP DT Sbjct: 29 CTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSL 88 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 P ++ L +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLWHSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|323486564|ref|ZP_08091886.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14163] gi|323694298|ref|ZP_08108472.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14673] gi|323400157|gb|EGA92533.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14163] gi|323501644|gb|EGB17532.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14673] Length = 454 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 29/55 (52%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +NC CK V+ CPV + + I +EC +CG C +CP DA+ +T+ Sbjct: 308 ADNCKGCKSCVVVDACPVSAAAVEDGTVRIPEEECNNCGRCTSKCPFDAVTEETK 362 >gi|312898191|ref|ZP_07757582.1| ferredoxin [Megasphaera micronuciformis F0359] gi|310620688|gb|EFQ04257.1| ferredoxin [Megasphaera micronuciformis F0359] Length = 54 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +VV++ C+ C C CP EGE + D CIDCG CE CP AI + Sbjct: 2 HVVSDECVKCGA--CEATCPTGAITEGETKYVVG-DACIDCGACESVCPTGAIAAE 54 >gi|303328543|ref|ZP_07358979.1| tetrathionate reductase complex, subunit B [Desulfovibrio sp. 3_1_syn3] gi|302861374|gb|EFL84312.1| tetrathionate reductase complex, subunit B [Desulfovibrio sp. 3_1_syn3] Length = 245 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C CK C+ VCPV Y+ +N + I CI CG C CP DA Sbjct: 95 CNHCKEPACLPVCPVKATYQHDNGIVVIDASACIGCGFCVQACPYDA 141 >gi|289422669|ref|ZP_06424509.1| hydrogenase large subunit domain protein [Peptostreptococcus anaerobius 653-L] gi|289156848|gb|EFD05473.1| hydrogenase large subunit domain protein [Peptostreptococcus anaerobius 653-L] Length = 515 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + T C C CVEVCP + G++F I ++CI CG C+ CP AI Sbjct: 116 FFTTNTCRGCLARPCVEVCPKNAISMVNGKSF--IDQEKCIKCGRCKSSCPYGAIAKLER 173 Query: 61 P 61 P Sbjct: 174 P 174 >gi|328951931|ref|YP_004369265.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452255|gb|AEB08084.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 526 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 20/67 (29%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD----CFYEGE-----------NFLAIHPDECIDCGV 45 + Y +C++C+ E CP F+EGE ++PD+CI CG+ Sbjct: 449 IPYTEGRDCLVCE-----EHCPTAPKAITFHEGEVQDLNGKRMPVKLPRVNPDQCIGCGI 503 Query: 46 CEPECPV 52 CE +CPV Sbjct: 504 CENKCPV 510 >gi|295103488|emb|CBL01032.1| Iron only hydrogenase large subunit, C-terminal domain [Faecalibacterium prausnitzii SL3/3] Length = 517 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQDKCIKCGRCVTVCPYNAIVKTERP 177 >gi|261403277|ref|YP_003247501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370270|gb|ACX73019.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 164 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 I+C+H C EVCPV + ++ ++ D CI CG+C CP AI Sbjct: 42 IICQHCASAPCKEVCPVSAIEHKDGYVYLNEDICIGCGLCALACPFGAI 90 >gi|256827734|ref|YP_003151693.1| 4Fe-4S protein [Cryptobacterium curtum DSM 15641] gi|256583877|gb|ACU95011.1| 4Fe-4S protein [Cryptobacterium curtum DSM 15641] Length = 384 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 17 CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CV +CP+D E N L I + C+ CG C CP +A+ P P Sbjct: 39 CVAICPIDETITIEKNNLLIDFERCVSCGACTTACPTNALAPLDPP 84 >gi|190192132|dbj|BAG48267.1| 4Fe-4S type iron-sulfur protein [Microcystis aeruginosa NIES-843] Length = 74 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C + +G ++ I CIDCG+C CPV+ AI P P L+ Sbjct: 14 ADCVSACPVACIHPGPGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAILPQERPDLQ 71 >gi|157377341|ref|YP_001475941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319715|gb|ABV38813.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 231 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 T V C C + CV VCPV+ Y+ E + I +ECI C +C CP A + D Sbjct: 81 TLAVPNQCNQCDNPACVYVCPVEATYKREEDGIVVIDHEECIHCQLCVDACPYGARRKD 139 >gi|118443000|ref|YP_877778.1| hydrogenase (Fe) large chain [Clostridium novyi NT] gi|118133456|gb|ABK60500.1| hydrogenase (Fe) large chain [Clostridium novyi NT] Length = 443 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 16/108 (14%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + +TE C+ C T C VCPV C + + I +C+ CG C CP+ A+ Sbjct: 27 FQITEKCVGC--TKCARVCPVSCISGKVKERHVIDTTKCVKCGQCISACPMGALP----- 79 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 KIN + ++ +K+ L ++ +YF PG Sbjct: 80 ------KIN--FISEAKKALNQKDKLVITQVAPAIRATLGEYFGLEPG 119 >gi|224368549|ref|YP_002602712.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691265|gb|ACN14548.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] Length = 422 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA--IKPD 58 C+ C+ C+ CPV +G++ + I+P C CG+C CP A I PD Sbjct: 76 CLHCQEPLCIPACPVRAIEKGKDGIVRINPALCTGCGICALACPEAAPMITPD 128 >gi|161612713|ref|YP_001586678.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362077|gb|ABX65845.1| hypothetical protein SPAB_00411 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 287 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFSLAKGQVSIDTTRCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEPG 136 >gi|308051326|ref|YP_003914892.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307633516|gb|ADN77818.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 205 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPD 58 +Y V+ C C + CV+ CP ++ + +H D+ C+ C C CP DA + D Sbjct: 62 FSYYVSIGCNHCSNPVCVKACPTGAMHKRRSDGLVHVDQGICVGCEACARACPYDAPQID 121 Query: 59 TEPGL 63 + G+ Sbjct: 122 KDRGV 126 >gi|291550262|emb|CBL26524.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus torques L2-14] Length = 434 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C C EVCP G++F I D+CI CG C+ CP DAI Sbjct: 48 YEVSNVCKGCLAHPCQEVCPRGAISMVNGKSF--IDQDKCIKCGKCKSVCPYDAIAKKER 105 Query: 61 P 61 P Sbjct: 106 P 106 >gi|325680883|ref|ZP_08160420.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324107347|gb|EGC01626.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 405 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV-DA 54 ++ +V ++C C + C+ CP DC EG ++ +CIDCG C CPV + Sbjct: 3 ISELVKKDC--CGCSACMNSCPKDCIKMKPDKEGFSYPVTDAAKCIDCGRCTKVCPVLNK 60 Query: 55 IKPDTEP 61 K D P Sbjct: 61 NKTDDRP 67 >gi|260888133|ref|ZP_05899396.1| putative polyferredoxin [Selenomonas sputigena ATCC 35185] gi|260862162|gb|EEX76662.1| putative polyferredoxin [Selenomonas sputigena ATCC 35185] Length = 415 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 17 CVEVCPVDCF---YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CV +CP EGE+F LA P C CG+C CP A++ P + W Sbjct: 333 CVRLCPHGALAAEIEGEDFVLAFTPQLCTACGLCTARCPKSALRLAASPTAKRW 386 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C +VCP F G HPD CI+CG+C CP A++ Sbjct: 81 CEDVCPAGAFRWG----VPHPDLCIECGLCTAVCPAAAVE 116 >gi|222823395|ref|YP_002574969.1| formate dehydrogenase, beta (iron-sulfur) subunit [Campylobacter lari RM2100] gi|222538617|gb|ACM63718.1| formate dehydrogenase, beta (iron-sulfur) subunit [Campylobacter lari RM2100] Length = 189 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 + T C C C +VCPV CFY + + +H + CI CG C CP A Sbjct: 50 FSTTLACQHCTDAPCEQVCPVKCFYIRADGIVLHDKKTCIGCGYCLYACPFGA 102 >gi|308272512|emb|CBX29116.1| hypothetical protein N47_J00970 [uncultured Desulfobacterium sp.] Length = 822 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 C +CP + +N+ I D C CG+C CP +AI +E G KI SE Sbjct: 647 CYRICPHNAVTIRDNYQPVISTDACFGCGICVSHCPANAISVISESGSVSSGKIASE 703 >gi|198283943|ref|YP_002220264.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667094|ref|YP_002426577.1| sulfur reductase, iron-sulfur binding subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248464|gb|ACH84057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519307|gb|ACK79893.1| sulfur reductase, iron-sulfur binding subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 207 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 20/104 (19%) Query: 11 LCKHTD---CVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP----DTEPG 62 LC H D CV VCP + E + ++PD C+ C C CP DA P D + G Sbjct: 60 LCNHCDNPPCVSVCPTGATWKEANGIVRVNPDICMGCQACAMACPYDARYPADSNDIDKG 119 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 L + K K ++PS K D + ++ P Sbjct: 120 LGYYGK------------DFLKRTVPSIDKCDFCYDRLQQGLEP 151 >gi|119719130|ref|YP_919625.1| putative ATPase RIL [Thermofilum pendens Hrk 5] gi|119524250|gb|ABL77622.1| ABC transporter related [Thermofilum pendens Hrk 5] Length = 601 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 11/56 (19%) Query: 11 LCK----HTDCVEVCPVD-----CFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 LC+ + +CV+ CP++ C + E EN I + C+ CG+C +CP AI Sbjct: 10 LCRPSKCNQECVKFCPINRSGSKCVWIDEVENKARISEELCVGCGICVKKCPFSAI 65 >gi|28199470|ref|NP_779784.1| ferredoxin [Xylella fastidiosa Temecula1] gi|182682201|ref|YP_001830361.1| ferredoxin [Xylella fastidiosa M23] gi|28057585|gb|AAO29433.1| ferredoxin II [Xylella fastidiosa Temecula1] gi|182632311|gb|ACB93087.1| electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa M23] gi|307578471|gb|ADN62440.1| ferredoxin [Xylella fastidiosa subsp. fastidiosa GB514] Length = 139 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 81 VAWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 135 >gi|297570515|ref|YP_003691859.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfurivibrio alkaliphilus AHT2] gi|296926430|gb|ADH87240.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfurivibrio alkaliphilus AHT2] Length = 682 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 9/56 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C+ C +CV +CP Y+ E I+ + C+ CG+C CP AIK Sbjct: 488 VTADRCVKC--LNCVRLCP----YQAPRIEQVALINRERCLACGICHGACPTGAIK 537 >gi|149191926|ref|ZP_01870158.1| iron-sulfur cluster-binding protein [Vibrio shilonii AK1] gi|148834231|gb|EDL51236.1| iron-sulfur cluster-binding protein [Vibrio shilonii AK1] Length = 553 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T+ C LC CV VCP + + A+ +CI CG+CE CP A+ Sbjct: 417 TDKCTLC--MACVAVCPTKALHNDGDRPALDFIEQDCIQCGMCEKACPESAL 466 >gi|108799547|ref|YP_639744.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119868660|ref|YP_938612.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|108769966|gb|ABG08688.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119694749|gb|ABL91822.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] Length = 135 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V T C+ C CV+VCP D F GE+ + + +C C +CE CPVDA+ Sbjct: 5 VHTAACVACDV--CVKVCPTDVFERGEDGVPVIARQSDCQTCFMCEAYCPVDAL 56 >gi|51247051|ref|YP_066934.1| related to F420H2-dehydrogenase, beta subunit [Desulfotalea psychrophila LSv54] gi|50878088|emb|CAG37944.1| related to F420H2-dehydrogenase, beta subunit [Desulfotalea psychrophila LSv54] Length = 443 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEP 61 E+C C C+ +CP C + E FL DE C +CG+CE CPV I P + Sbjct: 63 EDCCGCHA--CLSICPAKCIQMLPDTEGFLYPMVDESLCPECGLCESVCPV--INPPRQE 118 Query: 62 G 62 G Sbjct: 119 G 119 >gi|150389144|ref|YP_001319193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949006|gb|ABR47534.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 358 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+E+CPV+ + E + I + C CG+C CP A+ Sbjct: 36 CIEICPVEAIKQKETIIVIDKNSCNGCGICNVVCPSQAL 74 >gi|307611754|emb|CBX01462.1| hypothetical protein LPW_31501 [Legionella pneumophila 130b] Length = 204 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + AI EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 >gi|300114500|ref|YP_003761075.1| NADH-quinone oxidoreductase subunit I [Nitrosococcus watsonii C-113] gi|299540437|gb|ADJ28754.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus watsonii C-113] Length = 180 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKTEDEQGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY + PN+ +KE L Sbjct: 116 LTPDFEMG---------EY--ERPNLVYEKEDL 137 >gi|254449088|ref|ZP_05062540.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium HTCC5015] gi|198261280|gb|EDY85573.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium HTCC5015] Length = 93 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 13/95 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC--GVCEPE----CPVDA 54 M +T+ CI C C VCP Y+GE I PD C +C EP+ CPVD Sbjct: 1 MALKITDECINCDV--CEPVCPNQAIYQGEEIFEIDPDLCTECVGHYGEPQCVEICPVDC 58 Query: 55 I-----KPDTEPGLELWLKINSEYATQWPNITTKK 84 I KP+TE L L + E P +T+ Sbjct: 59 IPKDENKPETEAELMLKYERLIELGQTTPTQSTES 93 >gi|88601919|ref|YP_502097.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88187381|gb|ABD40378.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 425 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 20/80 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-------HP-----------DECIDCG 44 YV +C C DCVEVCPV+ + + + + HP + CIDCG Sbjct: 98 YVRAADCTGCG--DCVEVCPVEVYNRFDAGIGVRKAIYKAHPQVVPNVVIRDKEHCIDCG 155 Query: 45 VCEPECPVDAIKPDTEPGLE 64 +C C A+ D+E E Sbjct: 156 LCYDICGKQAVLRDSEDAEE 175 >gi|330949992|gb|EGH50252.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae Cit 7] Length = 291 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGASKLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|317493923|ref|ZP_07952340.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918250|gb|EFV39592.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 185 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E CI C C CP + EG ++H CI C CE CP AIK E Sbjct: 38 EQCIACG--ACTAACPANALTMETNAREGTRTWSLHLGRCIFCARCEEVCPTAAIKLTPE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 FELAVWNK 103 >gi|238059197|ref|ZP_04603906.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] gi|237881008|gb|EEP69836.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] Length = 294 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 112 MMSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCIPACPYGVI 164 >gi|159043786|ref|YP_001532580.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911546|gb|ABV92979.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dinoroseobacter shibae DFL 12] Length = 248 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGAREMDAAAGV 138 >gi|114770214|ref|ZP_01447752.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] gi|114549051|gb|EAU51934.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] Length = 248 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGARELDQAAGV 138 >gi|90417027|ref|ZP_01224956.1| electron transport complex protein RnfB [marine gamma proteobacterium HTCC2207] gi|90331374|gb|EAS46618.1| electron transport complex protein RnfB [marine gamma proteobacterium HTCC2207] Length = 209 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 114 VAYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIADECTGCDLCVEPCPVDCI 167 >gi|11095245|gb|AAG29808.1|AF249899_1 carbon monoxide dehydrogenase subunit CooF [Carboxydothermus hydrogenoformans] Length = 183 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + E C CK C+E P FY+ E + ++C CG+CE CP AI+ Sbjct: 95 ITIEQCKHCKRAKCIEAYPQGALFYDEEGRVVCSEEKCTGCGLCEKACPFHAIR 148 >gi|54295706|ref|YP_128121.1| hypothetical protein lpl2794 [Legionella pneumophila str. Lens] gi|53755538|emb|CAH17037.1| hypothetical protein lpl2794 [Legionella pneumophila str. Lens] Length = 204 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + AI EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 >gi|322835428|ref|YP_004215454.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] gi|321170629|gb|ADW76327.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] Length = 206 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C CK C + CP ++ G+ + ++ D+C+ CG C CP A + +T Sbjct: 71 AYTLSISCNHCKDPVCTKNCPTTAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQLNT 130 Query: 60 EPG 62 + G Sbjct: 131 QTG 133 >gi|226324119|ref|ZP_03799637.1| hypothetical protein COPCOM_01897 [Coprococcus comes ATCC 27758] gi|225207668|gb|EEG90022.1| hypothetical protein COPCOM_01897 [Coprococcus comes ATCC 27758] Length = 482 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEPGHYRSHIDASKCKECGQCAKACPYNAIAHLKRP 151 >gi|148361193|ref|YP_001252400.1| electron transport complex protein [Legionella pneumophila str. Corby] gi|296108529|ref|YP_003620230.1| hypothetical protein lpa_04189 [Legionella pneumophila 2300/99 Alcoy] gi|148282966|gb|ABQ57054.1| Electron transport complex protein [Legionella pneumophila str. Corby] gi|295650431|gb|ADG26278.1| hypothetical protein lpa_04189 [Legionella pneumophila 2300/99 Alcoy] Length = 204 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + AI EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 >gi|145495946|ref|XP_001433965.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401086|emb|CAK66568.1| unnamed protein product [Paramecium tetraurelia] Length = 3119 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 31/81 (38%) Query: 5 VTENCILCKHTDCVE-----------------VCPVDCFYEGENFLAIHPD--------- 38 V NC C CVE +CP DC ++G F + D Sbjct: 644 VNSNCDSCDQDKCVECSLGYALYQNECYKCPVLCPNDCMFDGSKFGCLKCDLGYYLDKVN 703 Query: 39 -ECIDCG----VCEPECPVDA 54 EC+ CG +CEP P+D Sbjct: 704 NECLQCGANCIICEPGIPMDG 724 >gi|91773344|ref|YP_566036.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanococcoides burtonii DSM 6242] gi|91712359|gb|ABE52286.1| conserved methanogen protein with ferredoxin domains [Methanococcoides burtonii DSM 6242] Length = 540 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/37 (56%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 H ECI CG CE ECP DAIK G EL+ NSE Sbjct: 477 HAPECIRCGQCEVECPEDAIKIIERDG-ELYANYNSE 512 >gi|193083887|gb|ACF09566.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote KM3-72-G3] Length = 490 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C +CP + E+ + D CI C C CP DA+ D G Sbjct: 78 CNHCEDAPCTTICPTTALFTREDGIVDFDDDRCIGCKSCMQACPYDALYIDPNKG 132 >gi|114320439|ref|YP_742122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226833|gb|ABI56632.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 566 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V T+ C LC C +VCP + + + D C+ CG+C+ CP +A+ Sbjct: 425 VNTDACTLC--MACAQVCPSSALTDNPESVQLRFIEDNCVQCGLCQTACPEEAV 476 >gi|167038468|ref|YP_001666046.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116862|ref|YP_004187021.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857302|gb|ABY95710.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929953|gb|ADV80638.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 372 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ + I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNSSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|330937551|gb|EGH41492.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 291 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGASKLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|332289789|ref|YP_004420641.1| electron transport complex protein RnfB [Gallibacterium anatis UMN179] gi|330432685|gb|AEC17744.1| electron transport complex protein RnfB [Gallibacterium anatis UMN179] Length = 202 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD- 58 + ++ E CI C T C++ CPVD L + PD C C +C CP D I + Sbjct: 111 VAFIHEEMCIGC--TKCIQACPVDAIIGANKALHTVIPDLCTGCELCVAPCPTDCITMEK 168 Query: 59 TEPGLELW 66 +P L+ W Sbjct: 169 VKPSLDSW 176 >gi|327401132|ref|YP_004341971.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316640|gb|AEA47256.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 184 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C++VCP+D Y+ + + ++ D+CI CG C CP A Sbjct: 55 CMHCSDPACLKVCPMDAIYKRPDGIVLVNKDKCIGCGYCSYACPFGA 101 >gi|283787036|ref|YP_003366901.1| anaerobic reductase component [Citrobacter rodentium ICC168] gi|282950490|emb|CBG90155.1| putative anaerobic reductase component [Citrobacter rodentium ICC168] Length = 209 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C + CP ++ G+ + ++ D+C+ CG C CP A + D Sbjct: 70 FAYTMSISCNHCADPICTKNCPTTAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMD 129 Query: 59 TEPG 62 T+ G Sbjct: 130 TQAG 133 >gi|117925397|ref|YP_866014.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Magnetococcus sp. MC-1] gi|117609153|gb|ABK44608.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Magnetococcus sp. MC-1] Length = 504 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 12/19 (63%), Positives = 16/19 (84%) Query: 35 IHPDECIDCGVCEPECPVD 53 + PD+CI CG+CE +CPVD Sbjct: 460 VEPDQCIGCGICENQCPVD 478 >gi|117617793|ref|YP_857568.1| iron-sulfur cluster-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559200|gb|ABK36148.1| iron-sulfur cluster-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 576 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 10/53 (18%) Query: 8 NCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAI 55 +C LC CV VCP + G NF+ +CI CG+CE CP AI Sbjct: 443 DCTLC--MGCVAVCPSRALHAVGHAPGLNFIE---QDCIQCGMCEKACPEQAI 490 >gi|77164629|ref|YP_343154.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|254433116|ref|ZP_05046624.1| NADH-quinone oxidoreductase, chain I subfamily, putative [Nitrosococcus oceani AFC27] gi|110287763|sp|Q3JC22|NUOI1_NITOC RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|76882943|gb|ABA57624.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|207089449|gb|EDZ66720.1| NADH-quinone oxidoreductase, chain I subfamily, putative [Nitrosococcus oceani AFC27] Length = 180 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKTEDEQGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY + PN+ +KE L Sbjct: 116 LTPDFEMG---------EY--ERPNLVYEKEDL 137 >gi|86140247|ref|ZP_01058808.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85823050|gb|EAQ43264.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 657 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++C LC CV +CP + + L + C+ CG+C CP DAI EP L Sbjct: 507 DSCTLC--LSCVSLCPSGALGDNPDLPQLRFQEEACLQCGICANTCPEDAIS--FEPRLN 562 Query: 65 L 65 L Sbjct: 563 L 563 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 8/57 (14%) Query: 10 ILCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +LC H+ C++ CP + ++I P C CG C CP AI D Sbjct: 274 LLCAHSRASQSGCSKCLDHCPTSAISSAGDHVSIDPMICAGCGACAALCPSGAITYD 330 >gi|283853706|ref|ZP_06370936.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283570916|gb|EFC18946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 378 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + CI C +CV VCPV + AI CI CG C CP A+ D + Sbjct: 199 VDAKKCIGCG--ECVAVCPVGAATMADRKAAIDKSSCIGCGECLTVCPKKAMSIDWHTEI 256 Query: 64 ELWLKINSEYA 74 +++ EYA Sbjct: 257 VPFMERMVEYA 267 >gi|73668816|ref|YP_304831.1| formylmethanofuran dehydrogenase subunit F [Methanosarcina barkeri str. Fusaro] gi|1124960|emb|CAA63629.1| molybdenum formylmethanofuran dehydrogenase subunit fmdF [Methanosarcina barkeri] gi|72395978|gb|AAZ70251.1| formylmethanofuran dehydrogenase, subunit F [Methanosarcina barkeri str. Fusaro] gi|1587237|prf||2206350E formylmethanofuran dehydrogenase Length = 346 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Query: 14 HTDCVEVCPVDCFYE-----GENFLAI--HPDECIDCGVCEPECPVDAI 55 HT CVEVCP + + GE I PD CI CG C CPVDAI Sbjct: 185 HT-CVEVCPANAIFNKKAKPGERVEKITHRPDACIYCGACAVACPVDAI 232 >gi|219667265|ref|YP_002457700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537525|gb|ACL19264.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 193 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C C++ CVEVCPV Y+ E+ + + +CI CG C CP +A Sbjct: 64 CNHCENAPCVEVCPVKASYKREDGMVLLDKKKCIGCGYCVASCPYNA 110 >gi|325479615|gb|EGC82707.1| 4Fe-4S binding domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 509 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CV VCP + I D+CI CG C CP +AI P Sbjct: 115 VTDQCHACIGHPCVNVCPKNAVTYTAKGAIIDQDKCIKCGKCVSACPYNAINHQKRP 171 >gi|296109959|ref|YP_003616908.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434773|gb|ADG13944.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 365 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ E+CI C+ C +VC + I PD+CI CG+CE ECPVD IK Sbjct: 267 VLEEDCIGCRA--CYKVCKFGAITISKKTKLPYILPDKCIVCGLCERECPVDTIK 319 >gi|240015030|ref|ZP_04721943.1| putative ferredoxin [Neisseria gonorrhoeae DGI18] gi|240081619|ref|ZP_04726162.1| putative ferredoxin [Neisseria gonorrhoeae FA19] gi|240113900|ref|ZP_04728390.1| putative ferredoxin [Neisseria gonorrhoeae MS11] gi|240116632|ref|ZP_04730694.1| putative ferredoxin [Neisseria gonorrhoeae PID18] gi|240118855|ref|ZP_04732917.1| putative ferredoxin [Neisseria gonorrhoeae PID1] gi|240122098|ref|ZP_04735060.1| putative ferredoxin [Neisseria gonorrhoeae PID24-1] gi|240124392|ref|ZP_04737348.1| putative ferredoxin [Neisseria gonorrhoeae PID332] gi|240124736|ref|ZP_04737622.1| putative ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|240129069|ref|ZP_04741730.1| putative ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|254494652|ref|ZP_05107823.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|260439607|ref|ZP_05793423.1| putative ferredoxin [Neisseria gonorrhoeae DGI2] gi|268597712|ref|ZP_06131879.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268599961|ref|ZP_06134128.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268602297|ref|ZP_06136464.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268604560|ref|ZP_06138727.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268683016|ref|ZP_06149878.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268683315|ref|ZP_06150177.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268687445|ref|ZP_06154307.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291042849|ref|ZP_06568590.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513692|gb|EEH63037.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|268551500|gb|EEZ46519.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268584092|gb|EEZ48768.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268586428|gb|EEZ51104.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268588691|gb|EEZ53367.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268623300|gb|EEZ55700.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268623599|gb|EEZ55999.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268627729|gb|EEZ60129.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291013283|gb|EFE05249.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 279 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVITDECTGCGLCVAPCPVDCI 124 >gi|154150339|ref|YP_001403957.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998891|gb|ABS55314.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 368 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 C EVCP I D CI C C CPV AI+ D E + L+ + EYA Sbjct: 201 CTEVCPKSAITLRNKKSVIDKDLCIGCFECMTVCPVHAIEVDWETEIPLFTERMVEYA 258 >gi|56696676|ref|YP_167037.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56678413|gb|AAV95079.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 649 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP AI Sbjct: 496 VNTDACTLC--LSCVSLCPSGALIDNPDLPQLNFQEDACLQCGICRTICPEQAI 547 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H+ +C+++CP + +AI P C CG C CP AI Sbjct: 267 LCAHSRAGQRGCSNCLDICPTGAITSAGDHVAIDPMVCAGCGACAALCPSTAI 319 >gi|310780590|ref|YP_003968921.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749913|gb|ADO84573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 59 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 M+Y + E+ CI C C VCPV+C E E I CIDCG C CPVD I P Sbjct: 1 MSYRINEDECIACGA--CEPVCPVECISEVEGGKRRIDEAVCIDCGACAGVCPVDCIAP 57 >gi|153853057|ref|ZP_01994466.1| hypothetical protein DORLON_00451 [Dorea longicatena DSM 13814] gi|149753843|gb|EDM63774.1| hypothetical protein DORLON_00451 [Dorea longicatena DSM 13814] Length = 503 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 31/136 (22%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C VCP D + E A ++PD+C+ CG Sbjct: 147 SYIDQEKCIKC--GKCKSVCPYDAISKKERPCAKACGVNAIENDKVGRAYVNPDKCVSCG 204 Query: 45 VCEPECPVDAIKPDTE---------PGLELWLKINSEYATQWP-NITTKKESLPSAAKMD 94 +C CP AI ++ G ++ +I + Q+ NI + +L +A + Sbjct: 205 MCMVNCPFGAISDKSQIFQLARALSEGEQIIAEIAPAFTGQFGDNINAR--NLKAALEEL 262 Query: 95 GVKQKYEKYFSPNPGG 110 G Q YE + G Sbjct: 263 GFSQVYEVALGADIGA 278 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+EVCP I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCMEVCPKGAISMVNGKSYIDQEKCIKCGKCKSVCPYDAISKKERP 175 >gi|332295972|ref|YP_004437895.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179075|gb|AEE14764.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 259 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 C C CV+VCP ++ EN +A ++CI CG C CP Sbjct: 72 QCFHCGDPACVKVCPSGALFQAENGIVAFDENKCIACGYCHSACP 116 >gi|331270137|ref|YP_004396629.1| transcriptional regulator [Clostridium botulinum BKT015925] gi|329126687|gb|AEB76632.1| transcriptional regulator [Clostridium botulinum BKT015925] Length = 629 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPV-----DCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + Y + ENC+ C C+ CP+ F +G+N + ++ D+CI CG C C +A Sbjct: 6 LIYTIEENCVGCNQ--CIRYCPIFDANTAYFSKGQNKVKVNIDKCIHCGKCIDVCEHEA 62 >gi|260597862|ref|YP_003210433.1| anaerobic dimethyl sulfoxide reductase subunit B [Cronobacter turicensis z3032] gi|260217039|emb|CBA30749.1| Anaerobic dimethyl sulfoxide reductase chain B [Cronobacter turicensis z3032] Length = 209 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C CP + EG+ + ++ D+C+ CG C CP A + + Sbjct: 70 FAYTLSISCNHCADPICTRNCPTTAMHKREGDGIVRVNTDKCVGCGYCAWSCPYGAPQRN 129 Query: 59 TEPG 62 T+ G Sbjct: 130 TQTG 133 >gi|159905555|ref|YP_001549217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887048|gb|ABX01985.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 138 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 14/99 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--------- 58 C+ C+ C+ CP D + ++ + I P++CI C +C CPV AI D Sbjct: 34 RCMHCEDAPCLNACPEDAIKKIDDKVVIEPEKCIGCALCAEVCPVGAIVIDKCKKVAVKC 93 Query: 59 ---TEPGLELWLKINSEYATQW--PNITTKKESLPSAAK 92 E G E+ L++ A + I K+ L S K Sbjct: 94 DGCVERGSEICLEVCPTKALDYYENTIENKRAELVSKLK 132 >gi|160880195|ref|YP_001559163.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg] gi|160428861|gb|ABX42424.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg] Length = 644 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + +NCI C C +VCPVDC ++ +++ I C CG C CPV+AI Sbjct: 220 IMDNCIGCDK--CTKVCPVDCIVGDFKEQHY--IDYTRCTHCGACLSTCPVNAI 269 >gi|89893344|ref|YP_516831.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219666616|ref|YP_002457051.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89332792|dbj|BAE82387.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219536876|gb|ACL18615.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 189 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVD 53 ++ C C++ +C+ VCPV + + E+ + IH E CI C +C CP D Sbjct: 55 ISVACNHCQNPECLRVCPVKAYTKREDGIVIHDQERCIGCKLCTMACPYD 104 >gi|325288996|ref|YP_004265177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324964397|gb|ADY55176.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 427 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++ C+ C C EVCPV EG + + + C+ CGVC CP +A++ Sbjct: 290 ISQECVGCGK--CAEVCPVLAISRPDNKEGRTAVQVDHEVCLGCGVCVRSCPKNAVE 344 >gi|293401032|ref|ZP_06645177.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306058|gb|EFE47302.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 504 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 25/58 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VVT+ C C C EVCP D I D+CI CG C CP AI P Sbjct: 115 VVTDTCQGCLAHPCKEVCPKDAISIINGKSVIDQDKCIKCGRCMDVCPYGAINKLERP 172 >gi|119355969|ref|YP_910613.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119353318|gb|ABL64189.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeobacteroides DSM 266] Length = 517 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C CV +CPV+ + E+ + CI C C CP +A+ D E Sbjct: 51 YFTVLRCNHCAEPPCVAICPVEALQKREDGIVDFDGRRCIGCKACAQACPYNALYIDPE 109 >gi|242241404|ref|YP_002989585.1| oxidoreductase Fe-S binding subunit [Dickeya dadantii Ech703] gi|242133461|gb|ACS87763.1| glutamate synthase, small subunit [Dickeya dadantii Ech703] Length = 671 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C VCP + + ++CI C C CP AI +T+ G Sbjct: 56 CRHCEDAPCASVCPTQALVRKNESIQLIQEKCIGCKTCVLACPFGAISVETQQG 109 >gi|29348365|ref|NP_811868.1| putative pyruvate formate-lyase 3 activating enzyme [Bacteroides thetaiotaomicron VPI-5482] gi|253569265|ref|ZP_04846675.1| glycyl-radical enzyme activating family protein [Bacteroides sp. 1_1_6] gi|29340269|gb|AAO78062.1| putative pyruvate formate-lyase 3 activating enzyme [Bacteroides thetaiotaomicron VPI-5482] gi|251841284|gb|EES69365.1| glycyl-radical enzyme activating family protein [Bacteroides sp. 1_1_6] Length = 299 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + + CI C C+ VC + + N L+IH + C DCG C C A+ Sbjct: 50 IEDKCIHC--FSCITVCEYEVLFIDSNRLSIHRERCTDCGKCTERCTSGAL 98 >gi|21242137|ref|NP_641719.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|21107549|gb|AAM36255.1| ferredoxin II [Xanthomonas axonopodis pv. citri str. 306] Length = 168 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 109 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 163 >gi|86139798|ref|ZP_01058364.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85823427|gb|EAQ43636.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 268 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEGV 144 >gi|283797938|ref|ZP_06347091.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|291074405|gb|EFE11769.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|295091868|emb|CBK77975.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Clostridium cf. saccharolyticum K10] Length = 209 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ CI CK C CP C + +AI + C+ CG C CP A++ P Sbjct: 153 YFVTDKCIGCKL--CYSKCPQKCIDITQKPVAIEQEHCLHCGNCFEICPAGAVERRQSP 209 >gi|268591053|ref|ZP_06125274.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291313858|gb|EFE54311.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 205 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C+ CV+VCP ++ E+ F+ + CI C C CP A + D+ Sbjct: 59 FSYYLSISCNHCEDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQFDS 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|167761074|ref|ZP_02433201.1| hypothetical protein CLOSCI_03472 [Clostridium scindens ATCC 35704] gi|167661308|gb|EDS05438.1| hypothetical protein CLOSCI_03472 [Clostridium scindens ATCC 35704] Length = 606 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 E CI C C CP G+ + AI P++CI CG C C DA+ Sbjct: 544 EKCIGCDM--CARGCPASAISGGKKEIHAIDPEKCIACGSCREACKFDAV 591 >gi|59802094|ref|YP_208806.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|194099985|ref|YP_002003124.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|239997992|ref|ZP_04717916.1| putative ferredoxin [Neisseria gonorrhoeae 35/02] gi|240017478|ref|ZP_04724018.1| putative ferredoxin [Neisseria gonorrhoeae FA6140] gi|268593845|ref|ZP_06128012.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|293398133|ref|ZP_06642338.1| electron transport complex protein RnfB [Neisseria gonorrhoeae F62] gi|59718989|gb|AAW90394.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|193935275|gb|ACF31099.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|268547234|gb|EEZ42652.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|291611396|gb|EFF40466.1| electron transport complex protein RnfB [Neisseria gonorrhoeae F62] gi|317165435|gb|ADV08976.1| putative ferredoxin [Neisseria gonorrhoeae TCDC-NG08107] Length = 279 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C+ CP D G+ + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPADAIMGAGKLMHTVITDECTGCGLCVAPCPVDCI 124 >gi|254466651|ref|ZP_05080062.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium Y4I] gi|206687559|gb|EDZ48041.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium Y4I] Length = 258 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDHCIGCGLCAWSCPYGARELDLAEGV 138 >gi|148244307|ref|YP_001219001.1| electron transport complex protein RnfB [Candidatus Vesicomyosocius okutanii HA] gi|146326134|dbj|BAF61277.1| electron transport complex protein RnfB [Candidatus Vesicomyosocius okutanii HA] Length = 181 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + +V + CI C T C++ CPVD F + + +EC C +C P CPVD I Sbjct: 107 VVFVDEQACIGC--TLCIQACPVDAFVGASKMMTQVIINECTGCDLCIPVCPVDCI 160 >gi|90418463|ref|ZP_01226375.1| putative 4Fe-4S ferredoxin [Aurantimonas manganoxydans SI85-9A1] gi|90338135|gb|EAS51786.1| putative 4Fe-4S ferredoxin [Aurantimonas manganoxydans SI85-9A1] Length = 680 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C LC CV CP D + G+ L C+ CG+C CP AI D Sbjct: 520 ERCTLC--MACVSACPADALRDTPGKPELRFVEAACVQCGICAATCPETAITLD 571 >gi|323699753|ref|ZP_08111665.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323459685|gb|EGB15550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 242 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDA 54 C+ C CVE CP Y+ G+ + + D CI CG C CP +A Sbjct: 57 CMHCDKPSCVEACPTGATYKAGDGSVVVDHDRCIGCGGCVAACPYNA 103 >gi|225572042|ref|ZP_03780906.1| hypothetical protein RUMHYD_00336 [Blautia hydrogenotrophica DSM 10507] gi|225040477|gb|EEG50723.1| hypothetical protein RUMHYD_00336 [Blautia hydrogenotrophica DSM 10507] Length = 501 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+ +CP + + I +CI CG C+ CP DAI T P Sbjct: 115 YEVSNICKGCVAHPCMLICPKGAISMVDGYSHIDQTKCIKCGKCKSVCPYDAISHKTRP 173 >gi|218780382|ref|YP_002431700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761766|gb|ACL04232.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 302 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +NC C+ C CP++ + I D C+ CG+C +CP D I+ Sbjct: 233 KNCGACRV--CTTACPLEAISNTDGRAEIREDRCMGCGICAAQCPNDKIR 280 >gi|157363272|ref|YP_001470039.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga lettingae TMO] gi|157313876|gb|ABV32975.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga lettingae TMO] Length = 356 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V +E C+ C+ C CPV+ + F AI+ D CI CG C C A+ P + Sbjct: 189 VASEKCVACRM--CERNCPVNAITVSK-FAAINYDVCIGCGQCIAMCNYGAMVPKWDSSS 245 Query: 64 ELWLKINSEY 73 E+ K +EY Sbjct: 246 EILSKKMAEY 255 >gi|13474673|ref|NP_106242.1| DMSO reductase chain B [Mesorhizobium loti MAFF303099] gi|14025428|dbj|BAB52028.1| DMSO reductase chain B [Mesorhizobium loti MAFF303099] Length = 244 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ + + I D+CI C +C CP A + DT+ G+ Sbjct: 79 RSCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVGV 137 >gi|2127911|pir||B64333 formate hydrogenlyase, subunit 2 - Methanococcus jannaschii Length = 168 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 I+C+H C EVCPV + ++ ++ D CI CG+C CP AI Sbjct: 46 IVCQHCASAPCKEVCPVSAIEHKDGYVYLNEDVCIGCGLCALACPFGAI 94 >gi|49082640|gb|AAT50720.1| PA3490 [synthetic construct] Length = 189 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 105 VAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIE 159 >gi|325970932|ref|YP_004247123.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] gi|324026170|gb|ADY12929.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] Length = 55 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CP EG+ ++ I D CIDCG C CP AI Sbjct: 1 MAYKITDACVACGT--CQPECPTGAISEGDIYV-IDADACIDCGTCADVCPTAAI 52 >gi|319787565|ref|YP_004147040.1| electron transport complex, RnfABCDGE type subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317466077|gb|ADV27809.1| electron transport complex, RnfABCDGE type, B subunit [Pseudoxanthomonas suwonensis 11-1] Length = 141 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 + V+ +CI C T C++ CPVD G + + D C C +C P CPVD I Sbjct: 80 VAVVIEADCIGC--TKCIQACPVDAIIGGAKLMHVVLDPLCTGCELCVPACPVDCI 133 >gi|257460510|ref|ZP_05625611.1| electron transport protein HydN [Campylobacter gracilis RM3268] gi|257441841|gb|EEV16983.1| electron transport protein HydN [Campylobacter gracilis RM3268] Length = 199 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 25/57 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP N++ +H + CI C +C CP AI + E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFDNNYIELHEEICIGCKMCTLACPYGAISSNAE 104 >gi|256751333|ref|ZP_05492212.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749715|gb|EEU62740.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 372 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|212633603|ref|YP_002310128.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212555087|gb|ACJ27541.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 214 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ + C C CV CPV ++ ++ + + D+CI C +C CP DA + DT Sbjct: 71 THYTSIGCNHCSEPVCVSTCPVGAMHKEQDTGLVKTNDDKCIGCNMCAQACPYDAPQMDT 130 Query: 60 E 60 E Sbjct: 131 E 131 >gi|220929030|ref|YP_002505939.1| electron transfer flavoprotein subunit alpha [Clostridium cellulolyticum H10] gi|219999358|gb|ACL75959.1| Electron transfer flavoprotein alpha subunit [Clostridium cellulolyticum H10] Length = 399 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++++ C+ C C+ VCP + +N + I + C CG+C P+C AI Sbjct: 6 ILSDKCVKC--LQCINVCPCNAIKNDKNVVYID-NTCTLCGICIPKCSFSAI 54 >gi|167038788|ref|YP_001661773.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X514] gi|300913627|ref|ZP_07130944.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307723358|ref|YP_003903109.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter sp. X513] gi|166853028|gb|ABY91437.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter sp. X514] gi|300890312|gb|EFK85457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307580419|gb|ADN53818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X513] Length = 372 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|291441974|ref|ZP_06581364.1| formate dehydrogenase beta subunit [Streptomyces ghanaensis ATCC 14672] gi|291344869|gb|EFE71825.1| formate dehydrogenase beta subunit [Streptomyces ghanaensis ATCC 14672] Length = 333 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 + ++ C C H C++VCP + E + + PD C CG C CP I +PD Sbjct: 150 MSSDVCKHCTHAGCLDVCPTGALFRTEFGSVVVQPDICNGCGYCVSGCPYGVIDRRPD 207 >gi|89893274|ref|YP_516761.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219666548|ref|YP_002456983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89332722|dbj|BAE82317.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219536808|gb|ACL18547.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 203 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 +T C C++ CV+VCPV Y+ E+ + I+ D CI C C CP +A Sbjct: 61 LTVACQHCENAPCVKVCPVGATYKAEDGRVLINYDRCIGCRYCMAACPYNA 111 >gi|269986447|gb|EEZ92733.1| ABC transporter related protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 572 Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 17 CVEVCP------VDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 C EVCP + Y EN AI CI CG+C CP DAI+ Sbjct: 21 CAEVCPRVRQGAKETVYARENGKAAITESLCISCGICVKRCPFDAIR 67 >gi|149193850|ref|ZP_01870948.1| iron-sulfur cluster-binding protein CooF [Caminibacter mediatlanticus TB-2] gi|149135803|gb|EDM24281.1| iron-sulfur cluster-binding protein CooF [Caminibacter mediatlanticus TB-2] Length = 172 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C+ C++ CVE CP+D YEG +++ I+ ++CI C C CP A+ P Sbjct: 62 QCMQCENAPCVEACPIDIIKYEG-DYVKIYEEDCIGCRSCAIVCPFGAVVMAESP 115 >gi|302391756|ref|YP_003827576.1| anaerobic carbon-monoxide dehydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] gi|302203833|gb|ADL12511.1| anaerobic carbon-monoxide dehydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] Length = 613 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++C C T CV+ CP D E + I D+CI CG C CP DAI Sbjct: 559 YQITDDCQGC--TKCVDECPGDAISGEAKEQHTIDEDDCIKCGSCINVCPFDAI 610 >gi|291435505|ref|ZP_06574895.1| 4Fe-4S ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|291338400|gb|EFE65356.1| 4Fe-4S ferredoxin [Streptomyces ghanaensis ATCC 14672] Length = 266 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 + ++ C C H C++VCP + E + + D C CG C P CP I +PD Sbjct: 174 MSSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDQRPD 231 >gi|289577411|ref|YP_003476038.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|289527124|gb|ADD01476.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] Length = 372 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|225016098|ref|ZP_03705331.1| hypothetical protein CLOSTMETH_00042 [Clostridium methylpentosum DSM 5476] gi|224951095|gb|EEG32304.1| hypothetical protein CLOSTMETH_00042 [Clostridium methylpentosum DSM 5476] Length = 490 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 24/51 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+NC C C++ CP + I +C +CG C CP +AI Sbjct: 103 VTQNCRGCLAKKCIKACPFGAISTSDGHAVIDKKKCRECGKCVAACPYNAI 153 >gi|219851773|ref|YP_002466205.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] gi|219546032|gb|ACL16482.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] Length = 288 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 15/89 (16%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CV +CP + ++ D+CI+C +C CP + W+ + Y Sbjct: 174 CVNICPTGAISREGSSYSLDLDKCINCSICTASCPTGS-----------WVAVQKGYIL- 221 Query: 77 WPNITTKKESLPS-AAKMDGVKQKYEKYF 104 W T K +P A+++DGV + E+ + Sbjct: 222 WIGGTMGK--IPRLASRLDGVIESKERLY 248 >gi|194332908|ref|YP_002014768.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194310726|gb|ACF45121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Prosthecochloris aestuarii DSM 271] Length = 515 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C+ CV +CPV+ + E+ + CI C C CP A+ D E Sbjct: 51 YFTVLRCNHCEDPPCVNICPVEALQKREDGIVDFDKRRCIGCKACGQACPYGALYIDPE 109 >gi|9651771|gb|AAF91263.1|AF230199_5 pyruvate oxidoreductase gamma subunit [Methanococcus maripaludis] Length = 85 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C++ C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCEN--CYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKAERE 83 >gi|323704847|ref|ZP_08116424.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535773|gb|EGB25547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 372 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V + C C+ C++ CP D + I P++CI CG C C DAI P ++ Sbjct: 191 VGKKCTACQ--TCIKNCPEDAISLVDGKAYIDPEKCIGCGECITMCQYDAINPQWGTDMD 248 Query: 65 LWLKINSEYA 74 +++ +EYA Sbjct: 249 EFVERMTEYA 258 >gi|255261730|ref|ZP_05341072.1| 4Fe-4S binding domain protein [Thalassiobium sp. R2A62] gi|255104065|gb|EET46739.1| 4Fe-4S binding domain protein [Thalassiobium sp. R2A62] Length = 252 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D E G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQEEGV 138 >gi|126435201|ref|YP_001070892.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|126235001|gb|ABN98401.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 135 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V T C+ C CV+VCP D F GE+ + + +C C +CE CPVDA+ Sbjct: 5 VHTAACVACDV--CVKVCPTDVFERGEDGVPVIARQSDCQTCFMCEAYCPVDAL 56 >gi|114564835|ref|YP_752349.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114336128|gb|ABI73510.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 220 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y + +C C CV+ CP ++ + + +H D CI C C CP DA P Sbjct: 76 FSYYTSISCNHCNEPVCVKACPTGAMHKRREDGLVLVHTDLCIGCNSCAEACPYDA--PQ 133 Query: 59 TEPGLELWLKINSEY 73 +P ++ K + Y Sbjct: 134 LDPQRKVMTKCDGCY 148 >gi|320101426|ref|YP_004177018.1| ABC transporter-like protein [Desulfurococcus mucosus DSM 2162] gi|319753778|gb|ADV65536.1| ABC transporter related protein [Desulfurococcus mucosus DSM 2162] Length = 602 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Query: 3 YVVTENCILCKHTDCVEVCPVD-------CFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y + C L +C+ CPV+ G+N ++ I D CI CG+C +CP A Sbjct: 11 YCKPDKCSL----ECIRFCPVNRGRRKKAIELSGDNKYVVISEDACIGCGICVKKCPFHA 66 Query: 55 I 55 I Sbjct: 67 I 67 >gi|299135388|ref|ZP_07028578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298589796|gb|EFI50001.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 658 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 + C LC CV VCP + + L D C+ CG+CE CP I+ Sbjct: 503 DGCTLC--LSCVSVCPTGALSDDPDRPMLRFAEDACVQCGLCEATCPEKVIE 552 >gi|295115164|emb|CBL36011.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [butyrate-producing bacterium SM4/1] Length = 209 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ CI CK C CP C + +AI + C+ CG C CP A++ P Sbjct: 153 YFVTDKCIGCKL--CYSKCPQKCIDITQKPVAIEQEHCLHCGNCFEICPAGAVERRQSP 209 >gi|121534183|ref|ZP_01666008.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307286|gb|EAX48203.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 193 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 22/48 (45%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP YE + F+ I+ CI C VC CP AI Sbjct: 63 QCRQCEDAPCAHACPTGAIYEEDRFVKINESNCIGCKVCTMVCPFGAI 110 >gi|152989151|ref|YP_001347023.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PA7] gi|166991043|sp|A6V1T8|RNFB_PSEA7 RecName: Full=Electron transport complex protein rnfB gi|150964309|gb|ABR86334.1| probable ferredoxin [Pseudomonas aeruginosa PA7] Length = 188 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 105 VAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIE 159 >gi|325929561|ref|ZP_08190675.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas perforans 91-118] gi|325540071|gb|EGD11699.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas perforans 91-118] Length = 142 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 83 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 137 >gi|295689414|ref|YP_003593107.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caulobacter segnis ATCC 21756] gi|295431317|gb|ADG10489.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caulobacter segnis ATCC 21756] Length = 128 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 VV + C C DCV+ CP D GE A+ H +C C +CE CP DA+ Sbjct: 5 VVEDRCTGCG--DCVQACPSDVLRVGEGGKAVIAHQVDCQTCLLCELYCPADAL 56 >gi|239933594|ref|ZP_04690547.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 + ++ C C H C++VCP + E + + PD C CG C CP I +PD Sbjct: 155 MSSDVCKHCTHAGCLDVCPTGALFRTEFGSVVVQPDICNGCGYCVSGCPYGVIDRRPD 212 >gi|288549934|ref|ZP_05968681.2| putative polyferredoxin [Enterobacter cancerogenus ATCC 35316] gi|288317249|gb|EFC56187.1| putative polyferredoxin [Enterobacter cancerogenus ATCC 35316] Length = 290 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 5 VTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ + C +VCP F + + I P CI+CG C CP DAI Sbjct: 11 VTQACVRRRFRHASCHACADVCPAQAFSVTDGQVTIDPSRCIECGDCLFVCPTDAIS 67 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TE CILC C CP +N L + C CG CE CP AIK Sbjct: 189 TEKCILCG--ACWRSCPEKAIRFEDNALVMENARCTGCGGCEAVCPSHAIK 237 >gi|242280658|ref|YP_002992787.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123552|gb|ACS81248.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 304 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C C+E CP + + + I P +C+ CGVC +C DA++ Sbjct: 241 QKCIGC--GQCMEYCPFGAMHLRDKRMRIDPKKCMGCGVCTNKCRKDALR 288 >gi|74317757|ref|YP_315497.1| putative tetrathionate reductase subunit B [Thiobacillus denitrificans ATCC 25259] gi|74057252|gb|AAZ97692.1| putative tetrathionate reductase subunit B [Thiobacillus denitrificans ATCC 25259] Length = 245 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 TY++ C C++ CV VCPV F + + + D C+ C C CP DA Sbjct: 89 TYMLPRLCNHCENPPCVPVCPVGATFKRDDGIVVVDGDRCVGCAYCVQACPYDA 142 >gi|15837149|ref|NP_297837.1| ferredoxin [Xylella fastidiosa 9a5c] gi|9105406|gb|AAF83357.1|AE003902_2 ferredoxin II [Xylella fastidiosa 9a5c] Length = 159 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 101 VAWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 155 >gi|85059572|ref|YP_455274.1| NADH dehydrogenase subunit I [Sodalis glossinidius str. 'morsitans'] gi|110287775|sp|Q2NSK6|NUOI_SODGM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|84780092|dbj|BAE74869.1| NADH dehydrogenase I subunit I [Sodalis glossinidius str. 'morsitans'] Length = 180 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|332796874|ref|YP_004458374.1| NADH-quinone oxidoreductase, chain I [Acidianus hospitalis W1] gi|332694609|gb|AEE94076.1| NADH-quinone oxidoreductase, chain I [Acidianus hospitalis W1] Length = 164 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Query: 9 CILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C T C +CP D Y+G+ I+ C+ CG C CPVDA+K Sbjct: 61 CIGC--TLCAMICPADAMKMMTYQGKKLPTINYGRCVFCGFCVDICPVDALK 110 >gi|331015678|gb|EGH95734.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 291 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|315453072|ref|YP_004073342.1| ferredoxin, 4Fe-4S [Helicobacter felis ATCC 49179] gi|315132124|emb|CBY82752.1| ferredoxin, 4Fe-4S [Helicobacter felis ATCC 49179] Length = 84 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V++ CI C C E CP + E + I PD C +C C CPVDA Sbjct: 1 MSLLVSQECIACDA--CREECPTEAIDENDPIYNIDPDRCTECIGYSDEPNCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IMPD 62 >gi|116051507|ref|YP_789657.1| electron transport complex protein RnfB [Pseudomonas aeruginosa UCBPP-PA14] gi|313108854|ref|ZP_07794838.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa 39016] gi|122260647|sp|Q02QX9|RNFB_PSEAB RecName: Full=Electron transport complex protein rnfB gi|115586728|gb|ABJ12743.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa UCBPP-PA14] gi|310881340|gb|EFQ39934.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa 39016] Length = 188 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 105 VAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIE 159 >gi|258515754|ref|YP_003191976.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779459|gb|ACV63353.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 369 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + CI C C VCP +N A I PD CI CG C CP AI+ D E Sbjct: 190 VNQDKCIGCAQ--CSTVCPEKASTLNDNNKAEISPDSCIGCGECLTTCPEKAIEMDWETE 247 Query: 63 LELWLKINSEYA 74 + L+ +EYA Sbjct: 248 IPALLERMTEYA 259 >gi|254283716|ref|ZP_04958684.1| NADH dehydrogenase i, i subunit [gamma proteobacterium NOR51-B] gi|219679919|gb|EED36268.1| NADH dehydrogenase i, i subunit [gamma proteobacterium NOR51-B] Length = 175 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE----------NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC + F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQATKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 Query: 57 --PDTE 60 PD E Sbjct: 111 LTPDFE 116 >gi|15668439|ref|NP_247237.1| carbon monoxide dehydrogenase iron sulfur subunit CooF2 [Methanocaldococcus jannaschii DSM 2661] gi|37078241|sp|Q57713|FER9_METJA RecName: Full=Uncharacterized ferredoxin MJ0265 gi|2826268|gb|AAB98252.1| carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF2) [Methanocaldococcus jannaschii DSM 2661] Length = 166 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 I+C+H C EVCPV + ++ ++ D CI CG+C CP AI Sbjct: 44 IVCQHCASAPCKEVCPVSAIEHKDGYVYLNEDVCIGCGLCALACPFGAI 92 >gi|326389280|ref|ZP_08210848.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325994643|gb|EGD53067.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 372 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|262368735|ref|ZP_06062064.1| electron transport complex protein [Acinetobacter johnsonii SH046] gi|262316413|gb|EEY97451.1| electron transport complex protein [Acinetobacter johnsonii SH046] Length = 264 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ +I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCI 137 >gi|197285065|ref|YP_002150937.1| anaerobic dimethyl sulfoxide reductase subunit B [Proteus mirabilis HI4320] gi|194682552|emb|CAR42565.1| putative anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis HI4320] Length = 209 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +T +C C CV+ CP ++ G+ + + +C+ CG C CP A + + Sbjct: 70 FAYTLTISCNHCNDPICVKNCPTTAMHKRPGDGIVRVDTSKCVGCGYCSWSCPYGAPQMN 129 Query: 59 TEPG 62 TE G Sbjct: 130 TETG 133 >gi|187776781|ref|ZP_02993254.1| hypothetical protein CLOSPO_00297 [Clostridium sporogenes ATCC 15579] gi|187775440|gb|EDU39242.1| hypothetical protein CLOSPO_00297 [Clostridium sporogenes ATCC 15579] Length = 497 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FTVTEACRGCIQHKCMEVCSAKALARINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|284165623|ref|YP_003403902.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] gi|284015278|gb|ADB61229.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] Length = 224 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPG 62 C C++ CV VCP + E + F+++H D C+ C C CP A + PD+ G Sbjct: 91 QCYHCENAPCVSVCPTNALQKEDDGFVSVHEDLCVGCQYCLSGCPFGAPQFPDSNDG 147 >gi|152990158|ref|YP_001355880.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] gi|151422019|dbj|BAF69523.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] Length = 84 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLMITDECIACDA--CREECPTEAIEEGDPIYIIDPDRCTECVGFYDEPACIAVCPVDC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IVPD 62 >gi|94676609|ref|YP_588818.1| NADH dehydrogenase subunit I [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|110287758|sp|Q1LT96|NUOI_BAUCH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|94219759|gb|ABF13918.1| NADH-quinone oxidoreductase, chain I [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 180 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC EG F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCISLQKTESKEGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTE 60 PD E Sbjct: 116 LTPDFE 121 >gi|45359069|ref|NP_988626.1| pyruvate oxidoreductase (synthase) subunit delta [Methanococcus maripaludis S2] gi|45047944|emb|CAF31062.1| pyruvate oxidoreductase (synthase) subunit delta [Methanococcus maripaludis S2] Length = 85 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C++ C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCEN--CYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKAERE 83 >gi|167392731|ref|XP_001740273.1| hypothetical protein [Entamoeba dispar SAW760] gi|165895662|gb|EDR23298.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 504 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP C GE+ A I+ ++CI CG C CP AI Sbjct: 113 YFVTQSCEGCTSRPCSVNCPKKCISFGEDGRALINQNDCIKCGRCFKFCPYGAI 166 >gi|46579100|ref|YP_009908.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448513|gb|AAS95167.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] Length = 162 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C + CP + + + + + CI CG C CPVDA+ D E GL Sbjct: 46 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGL 101 >gi|313672549|ref|YP_004050660.1| electron transport complex, rnfabcdge type, b subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939305|gb|ADR18497.1| electron transport complex, RnfABCDGE type, B subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 260 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C + CPVD N I P++CI+CG C+ CP AI Sbjct: 213 CIACKL--CQKNCPVDAITVENNLAYIDPNKCINCGKCKEVCPTKAI 257 >gi|291530236|emb|CBK95821.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum 70/3] Length = 560 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CPV + I DECI CG+C CP +A I+ D EL + Y Sbjct: 17 CIRHCPVKSIRFSDGQANIVEDECILCGMCFVACPQNAKQIRNDVGKAKELIVSGTPVYV 76 Query: 75 TQWPNITTKKESLPSAAKMDGVKQ 98 + P+ + + A D +K+ Sbjct: 77 SIAPSFVANYDGIGITALNDALKK 100 >gi|21230794|ref|NP_636711.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769208|ref|YP_243970.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|188992355|ref|YP_001904365.1| ferredoxin [Xanthomonas campestris pv. campestris str. B100] gi|21112394|gb|AAM40635.1| ferredoxin II [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574540|gb|AAY49950.1| ferredoxin II [Xanthomonas campestris pv. campestris str. 8004] gi|167734115|emb|CAP52321.1| Putative ferredoxin [Xanthomonas campestris pv. campestris] Length = 139 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 80 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCVPACPVDCIE 134 >gi|319785595|ref|YP_004145071.1| DMSO reductase chain B [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171483|gb|ADV15021.1| DMSO reductase chain B [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 244 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ + + I D+CI C +C CP A + DT+ G+ Sbjct: 79 RSCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVGV 137 >gi|294635459|ref|ZP_06713947.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] gi|291091192|gb|EFE23753.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] Length = 218 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 + C C C++VCP + EN + ++P +CI CG C CP A Sbjct: 88 QACQHCDQAPCIDVCPTGASWRDENGIVRVNPADCIGCGYCVSACPYQA 136 >gi|257066859|ref|YP_003153115.1| hydrogenase large subunit domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798739|gb|ACV29394.1| hydrogenase large subunit domain protein [Anaerococcus prevotii DSM 20548] Length = 508 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CV VCP + I D+CI CG C CP AI P Sbjct: 115 VTDQCHACIGHPCVNVCPKNAVTYTAKGAIIDQDKCIKCGKCVAACPYQAINHQKRP 171 >gi|225575176|ref|ZP_03783786.1| hypothetical protein RUMHYD_03265 [Blautia hydrogenotrophica DSM 10507] gi|225037609|gb|EEG47855.1| hypothetical protein RUMHYD_03265 [Blautia hydrogenotrophica DSM 10507] Length = 317 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C CK ++ CPV+ + I PD C +CG C C DA++ + +PG +++ Sbjct: 172 DECNGCKKCSVIDACPVNAVKMVDGVAEIDPDICTNCGRCIGHCHFDALE-EGKPGFKIY 230 Query: 67 L 67 + Sbjct: 231 I 231 >gi|53804530|ref|YP_113813.1| NADH dehydrogenase subunit I [Methylococcus capsulatus str. Bath] gi|81682188|sp|Q608Y4|NUOI_METCA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|53758291|gb|AAU92582.1| NADH dehydrogenase I, I subunit [Methylococcus capsulatus str. Bath] Length = 171 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 49 ERCVACNL--CAAVCPVDCIALQKTEDVDGRWYPEFFRINFSRCILCGLCEEACPTYAIQ 106 Query: 57 --PDTE 60 PD E Sbjct: 107 LTPDFE 112 >gi|15598686|ref|NP_252180.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PAO1] gi|107103020|ref|ZP_01366938.1| hypothetical protein PaerPA_01004089 [Pseudomonas aeruginosa PACS2] gi|218890265|ref|YP_002439129.1| electron transport complex protein RnfB [Pseudomonas aeruginosa LESB58] gi|254242171|ref|ZP_04935493.1| hypothetical protein PA2G_02902 [Pseudomonas aeruginosa 2192] gi|17369007|sp|Q9HYB9|RNFB_PSEAE RecName: Full=Electron transport complex protein rnfB gi|226735423|sp|B7UWJ3|RNFB_PSEA8 RecName: Full=Electron transport complex protein rnfB gi|9949636|gb|AAG06878.1|AE004770_3 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|126195549|gb|EAZ59612.1| hypothetical protein PA2G_02902 [Pseudomonas aeruginosa 2192] gi|218770488|emb|CAW26253.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 188 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 105 VAYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIE 159 >gi|300712349|ref|YP_003738163.1| methyl-viologen-reducing hydrogenase delta subunit [Halalkalicoccus jeotgali B3] gi|299126032|gb|ADJ16371.1| methyl-viologen-reducing hydrogenase delta subunit [Halalkalicoccus jeotgali B3] Length = 712 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V++ C L C +CP D E L + ++C++CG+CE CP AI Sbjct: 571 VSDACTLTP--TCSNLCPTDAIRRTEWGLEFNHEKCVNCGLCEEGCPESAI 619 >gi|163740485|ref|ZP_02147879.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386343|gb|EDQ10718.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] Length = 264 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEGV 144 >gi|50123378|ref|YP_052545.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium atrosepticum SCRI1043] gi|49613904|emb|CAG77357.1| anaerobically expressed oxidoreductase [Pectobacterium atrosepticum SCRI1043] Length = 674 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCASVCPTQALIKKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNP 108 >gi|308049947|ref|YP_003913513.1| electron transport complex, RnfABCDGE type, B subunit [Ferrimonas balearica DSM 9799] gi|307632137|gb|ADN76439.1| electron transport complex, RnfABCDGE type, B subunit [Ferrimonas balearica DSM 9799] Length = 184 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + Y+ CI C T C++ CPVD G+ + D+C C +C CPVD I+ Sbjct: 106 VAYIREAECIGC--TKCIQACPVDAIIGTGKQMHTVLADQCTGCDLCVEPCPVDCIE 160 >gi|295697039|ref|YP_003590277.1| Polysulphide reductase NrfD [Bacillus tusciae DSM 2912] gi|295412641|gb|ADG07133.1| Polysulphide reductase NrfD [Bacillus tusciae DSM 2912] Length = 519 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA--IKPD 58 C C+ CV +CPV ++ + + E CI C C CP DA I PD Sbjct: 70 CNQCEDPPCVAICPVSAMFQRPDGIVDFDREVCIGCKACMAACPYDAIYIHPD 122 >gi|295394365|ref|ZP_06804589.1| formate dehydrogenase-N, beta subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294972717|gb|EFG48568.1| formate dehydrogenase-N, beta subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 356 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 11/64 (17%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK----------P 57 C C H C++VCP + E + + D C CG C CP I+ P Sbjct: 161 CKHCTHAGCLDVCPTGALFRTEFGTVVVQNDVCNGCGTCVAGCPFGVIERRDDGTVNTNP 220 Query: 58 DTEP 61 D EP Sbjct: 221 DREP 224 >gi|171185318|ref|YP_001794237.1| thiamine pyrophosphate binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934530|gb|ACB39791.1| thiamine pyrophosphate protein domain protein TPP-binding [Thermoproteus neutrophilus V24Sta] Length = 590 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Query: 9 CILCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C LC C + P G+ I P C CG+C CP AIK + E LE+W Sbjct: 534 CSLCYGLLRCSAIAP-----RGDRKAYIDPALCTGCGMCAEVCPTGAIKGERERWLEIW 587 >gi|28871290|ref|NP_793909.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213970874|ref|ZP_03398997.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] gi|301383775|ref|ZP_07232193.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302059917|ref|ZP_07251458.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130516|ref|ZP_07256506.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854540|gb|AAO57604.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924397|gb|EEB57969.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] Length = 291 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|71735100|ref|YP_273634.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555653|gb|AAZ34864.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 280 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 73 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 127 >gi|51245620|ref|YP_065504.1| formate dehydrogenase, beta subunit (iron-sulfur subunit) [Desulfotalea psychrophila LSv54] gi|50876657|emb|CAG36497.1| probable formate dehydrogenase, beta subunit (iron-sulfur subunit) [Desulfotalea psychrophila LSv54] Length = 197 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 ++ +C+ C C+ VCPVD Y+ ++ + + +CI CG C CP A Sbjct: 51 ISISCMHCADAPCIAVCPVDAIYQRDDGIVLADKKKCIGCGYCFMACPFGA 101 >gi|298528790|ref|ZP_07016194.1| protein of unknown function DUF362 [Desulfonatronospira thiodismutans ASO3-1] gi|298512442|gb|EFI36344.1| protein of unknown function DUF362 [Desulfonatronospira thiodismutans ASO3-1] Length = 374 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV+ CI C C CPV + + D+CI+C C+ CP DAI+ Sbjct: 308 VVSSRCISCG--ICAGHCPVGAMSMSSSGPVLDRDKCINCYCCQEMCPEDAIR 358 >gi|126666311|ref|ZP_01737290.1| NADH dehydrogenase subunit I [Marinobacter sp. ELB17] gi|126629112|gb|EAZ99730.1| NADH dehydrogenase subunit I [Marinobacter sp. ELB17] Length = 179 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +GE F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVACISLEKGEREDGRWYPEFFRINFSRCIFCGMCEEACPTSAIQ 114 Query: 57 --PDTEPG 62 PD E G Sbjct: 115 LTPDFEMG 122 >gi|260461936|ref|ZP_05810181.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] gi|259032183|gb|EEW33449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] Length = 244 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ + + I D+CI C +C CP A + DT+ G+ Sbjct: 79 RSCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVGV 137 >gi|256810831|ref|YP_003128200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256794031|gb|ACV24700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 164 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 I+C+H C EVCPV + ++ ++ + CI CG+C CP AI D Sbjct: 42 IICQHCASAPCKEVCPVSAIEHKDGYVYLNEEVCIGCGLCALACPFGAITLD 93 >gi|20093899|ref|NP_613746.1| ferredoxin [Methanopyrus kandleri AV19] gi|19886840|gb|AAM01676.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 379 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C+ C +VCPVD E I PD C+ CG+C CP A+ Sbjct: 236 YIQPDMCIGCR--ICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAV 288 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 11/59 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C +CV CP + ++ I PD CI C +C CPVDAI+ Sbjct: 202 ERCLGC--YNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPDMCIGCRICYDVCPVDAIR 258 >gi|145223743|ref|YP_001134421.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315444069|ref|YP_004076948.1| ferredoxin [Mycobacterium sp. Spyr1] gi|145216229|gb|ABP45633.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] gi|315262372|gb|ADT99113.1| ferredoxin [Mycobacterium sp. Spyr1] Length = 135 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V T CI C C+ VCP D F G++ + + +C C +CE CPVDA+ Sbjct: 5 VSTSACIACDV--CITVCPTDVFDRGDDGIPVIARQSDCQTCFMCEAYCPVDAL 56 >gi|294626911|ref|ZP_06705502.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665011|ref|ZP_06730320.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598771|gb|EFF42917.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605230|gb|EFF48572.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 142 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 83 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 137 >gi|158321169|ref|YP_001513676.1| hypothetical protein Clos_2144 [Alkaliphilus oremlandii OhILAs] gi|158141368|gb|ABW19680.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 220 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECP 51 E C C++ C CPVD E + A DE CI CGVC+ CP Sbjct: 123 ETCKQCENPKCASACPVDAISLNERWGAWMVDESKCIGCGVCKRACP 169 >gi|254975776|ref|ZP_05272248.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-66c26] gi|255093163|ref|ZP_05322641.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CIP 107932] gi|255314905|ref|ZP_05356488.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-76w55] gi|255517579|ref|ZP_05385255.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-97b34] gi|255650690|ref|ZP_05397592.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-37x79] gi|260683777|ref|YP_003215062.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CD196] gi|260687437|ref|YP_003218571.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile R20291] gi|306520615|ref|ZP_07406962.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-32g58] gi|260209940|emb|CBA63916.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CD196] gi|260213454|emb|CBE05132.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile R20291] Length = 140 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C+ CP +CF + E F+ + CI C +CE C A+ Sbjct: 55 CIHCNEPKCLGACPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGAL 101 >gi|73670092|ref|YP_306107.1| sulfite reductase subunit beta [Methanosarcina barkeri str. Fusaro] gi|72397254|gb|AAZ71527.1| sulfite reductase, beta subunit [Methanosarcina barkeri str. Fusaro] Length = 285 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V ENC+ CK C + C V E+ +I ++CI CG C C DA+K + Sbjct: 160 MPKIVEENCVGCKL--CEKACKVGAIKVLEDKASIDTEKCILCGACIAACRKDALKAE 215 >gi|78046995|ref|YP_363170.1| ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035425|emb|CAJ23070.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 156 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 97 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 151 >gi|50085926|ref|YP_047436.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter sp. ADP1] gi|49531902|emb|CAG69614.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter sp. ADP1] Length = 87 Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +TE CI C C VCP + Y GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITEECINCDV--CEPVCPNEAIYMGELIYEIHPDLCTECVGHFDQPQCQLFCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|325847091|ref|ZP_08169917.1| 4Fe-4S binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481063|gb|EGC84108.1| 4Fe-4S binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 502 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C CV VCP + I D+CI CG C CP +AI P Sbjct: 115 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVQACPYNAISHTKRP 171 >gi|313898382|ref|ZP_07831919.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] gi|312956764|gb|EFR38395.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] Length = 504 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T VVT+ C C C EVCP D I ++CI CG C CP AI P Sbjct: 113 TVVVTDTCQGCLAHPCKEVCPKDAISMVNGKSYIDQEKCIKCGRCMDVCPYGAINKLERP 172 >gi|309775984|ref|ZP_07670976.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916266|gb|EFP62014.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 504 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T VVT+ C C C EVCP D I ++CI CG C CP AI P Sbjct: 113 TVVVTDTCQGCLAHPCKEVCPKDAISMVNGKSYIDQEKCIKCGRCMDVCPYGAINKLERP 172 >gi|325921027|ref|ZP_08182908.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas gardneri ATCC 19865] gi|325548476|gb|EGD19449.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas gardneri ATCC 19865] Length = 143 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ T Sbjct: 84 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIELHT 141 >gi|288961311|ref|YP_003451650.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288913619|dbj|BAI75106.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 197 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 23/50 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C VCPVD G + + + CI C +C CP AI P Sbjct: 51 CHQCEDAPCARVCPVDAITFGADAILLDEQTCIGCKMCALACPFGAITPS 100 >gi|163752014|ref|ZP_02159224.1| TtrB [Shewanella benthica KT99] gi|161328119|gb|EDP99287.1| TtrB [Shewanella benthica KT99] Length = 231 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +T V C C + CV VCPV Y+ + + I DECI C +C CP A + D Sbjct: 80 VTLAVPNQCNQCDNPACVYVCPVGATYKRKEDGIVVIDHDECIYCQLCVDACPYGARRKD 139 >gi|330889574|gb|EGH22235.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 290 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|302336899|ref|YP_003802105.1| hydrogenase, Fe-only [Spirochaeta smaragdinae DSM 11293] gi|301634084|gb|ADK79511.1| hydrogenase, Fe-only [Spirochaeta smaragdinae DSM 11293] Length = 671 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 17/78 (21%) Query: 9 CILCKHTDCVEVC-------PVDCFYEGENFL-------AIHPDECIDCGVCEPECPVDA 54 C+LC DCV C +D + GE+ +I +CI+CG C CP A Sbjct: 146 CVLCG--DCVRYCHEIQGIGAIDFAFRGEHVQVTPAFGRSIGEVDCINCGQCAAVCPTGA 203 Query: 55 IKPDTEPGLELWLKINSE 72 I P +E E+W + E Sbjct: 204 IIPKSEIN-EVWNDLQDE 220 >gi|284006928|emb|CBA72199.1| hydrogenase-4 component H [Arsenophonus nasoniae] Length = 180 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + +G+ F ++ CI CG CE CP AI+ E Sbjct: 38 QQCIGC--GACVNACPSNALTAEIDLPKGQLFWQLNLGRCIFCGRCEEVCPTAAIRLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWRK 103 >gi|271965199|ref|YP_003339395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270508374|gb|ACZ86652.1| 4Fe-4S ferredoxin iron-sulfur binding domain- containing protein [Streptosporangium roseum DSM 43021] Length = 288 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 87 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQADVCNGCGYCVPACPYGVI 137 >gi|212696805|ref|ZP_03304933.1| hypothetical protein ANHYDRO_01367 [Anaerococcus hydrogenalis DSM 7454] gi|212676095|gb|EEB35702.1| hypothetical protein ANHYDRO_01367 [Anaerococcus hydrogenalis DSM 7454] Length = 502 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C CV VCP + I D+CI CG C CP +AI P Sbjct: 115 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVQACPYNAISHTKRP 171 >gi|114777067|ref|ZP_01452087.1| electron transport complex protein RnfB [Mariprofundus ferrooxydans PV-1] gi|114552588|gb|EAU55048.1| electron transport complex protein RnfB [Mariprofundus ferrooxydans PV-1] Length = 194 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CPVD + + + D C C +C CPVD I Sbjct: 105 LAFVREDECIGC--TLCIKACPVDAIIGAPKQYHTVLADHCTGCELCVEPCPVDCIDMLV 162 Query: 60 EPGL-ELWLKINSEYATQWPNITTKKESL 87 +P L E W WP T++ L Sbjct: 163 KPELIEHW---------SWPLPETRRSRL 182 >gi|78221282|ref|YP_383029.1| sigma-54 dependent trancsriptional regulator [Geobacter metallireducens GS-15] gi|78192537|gb|ABB30304.1| sigma54 specific transcriptional regulator, Fis family [Geobacter metallireducens GS-15] Length = 756 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V E C C CV CPV +++ I D CI CG C CP A Sbjct: 7 VKEKCRKCYC--CVRSCPVKAIKVAKSYTEIIVDRCIGCGNCLSNCPQQA 54 >gi|37526970|ref|NP_930314.1| NADH dehydrogenase subunit I [Photorhabdus luminescens subsp. laumondii TTO1] gi|81707635|sp|Q7N2J4|NUOI_PHOLL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|36786403|emb|CAE15456.1| NADH dehydrogenase I chain I (NADH-ubiquinone oxidoreductase chain 9) (NUO9) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 180 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|330984846|gb|EGH82949.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 290 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|320325636|gb|EFW81698.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327081|gb|EFW83095.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330876899|gb|EGH11048.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 290 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|282165282|ref|YP_003357667.1| pyruvate synthase delta chain [Methanocella paludicola SANAE] gi|282157596|dbj|BAI62684.1| pyruvate synthase delta chain [Methanocella paludicola SANAE] Length = 94 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKH--TDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + E CI CK C + P +C ++G+ I D C CG+C ECPVDAI + E Sbjct: 33 ISHEKCIGCKRCADSCPDGAPYECAHDGKKKKFCIDYDYCKGCGICAYECPVDAINMEKE 92 >gi|289829884|ref|ZP_06547372.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 185 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|188587487|ref|YP_001919032.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352174|gb|ACB86444.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 384 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA-IKPDTEPGLE 64 ENC LC+ CV+VCP D Y E+ + I+ + C+ CG C C +A I P +E + Sbjct: 198 ENCTLCER--CVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVCKEEALIVPQSEERFQ 255 Query: 65 LWLKINSEYATQ 76 L + A Q Sbjct: 256 KGLSEAAYAAVQ 267 >gi|187250889|ref|YP_001875371.1| Fe-hydrogenase large subunit family protein [Elusimicrobium minutum Pei191] gi|186971049|gb|ACC98034.1| Fe-hydrogenase large subunit family protein [Elusimicrobium minutum Pei191] Length = 478 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 25/54 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+VTE C C C+ CP + I P +C +CG C+ CP AI Sbjct: 112 NYMVTEVCQGCVARQCIYDCPFNAISMQNGRAYIEPAKCKNCGKCKSACPYGAI 165 >gi|126460106|ref|YP_001056384.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249827|gb|ABO08918.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 187 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C++ CV VCP Y + + I+P CI C C CP +A D E GL + Sbjct: 61 QCQHCENAPCVTVCPTGASYRDVDGLVKINPALCIGCKYCMVACPYEARWLDEETGLPM 119 >gi|91202885|emb|CAJ72524.1| strongly similar to membrane-bound [NiFe]-hydrogenase-3, small subunit (chain G) [Candidatus Kuenenia stuttgartiensis] Length = 262 Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +E C C CVE CP + + +G+ +L + +C+ CG+CE CP AI+ Sbjct: 37 SEKCKAC--NVCVETCPTNAYTWIEEQGKRYLQLSHAKCVFCGMCEEVCPYKAIR 89 >gi|296242973|ref|YP_003650460.1| ABC transporter-like protein [Thermosphaera aggregans DSM 11486] gi|296095557|gb|ADG91508.1| ABC transporter related protein [Thermosphaera aggregans DSM 11486] Length = 602 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 12/61 (19%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C L +C+ CPV+ E + I D+CI CG+C +CP +A Sbjct: 11 YCKPDKCTL----ECIRFCPVNRTKKVKAIDLSEDKTHSVIFEDKCIGCGICVKKCPFNA 66 Query: 55 I 55 I Sbjct: 67 I 67 >gi|220925117|ref|YP_002500419.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949724|gb|ACL60116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 670 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H T C+EVCP + +A+ P C CG C CP A Sbjct: 272 LCAHSRSRITGCTRCLEVCPTGAIAPAGDHVAVDPFVCAGCGACASVCPTGA 323 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE C LC CV CP + + L C+ CG+C CP D I EP L Sbjct: 521 TEACTLCHA--CVGACPTSALSDDPDRPVLTFSESLCVQCGLCAATCPEDVIT--LEPRL 576 Query: 64 EL 65 + Sbjct: 577 DF 578 >gi|126736831|ref|ZP_01752566.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126721416|gb|EBA18119.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 254 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEGV 138 >gi|134045121|ref|YP_001096607.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662746|gb|ABO34392.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 138 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--------- 58 C+ C+ C+ VCP D + ++ + I ++CI C +C CPV AI+ D Sbjct: 34 RCMHCEDAPCLNVCPEDAIKKIDDKVVIESEKCIGCALCAEVCPVGAIQIDKCKKVAVKC 93 Query: 59 ---TEPGLELWLKINSEYATQW--PNITTKKESLPSAAK 92 E G E+ +++ A + I K+ L S K Sbjct: 94 DGCVERGSEICMEVCPTKALDYYENTIENKRAELVSKLK 132 >gi|134045694|ref|YP_001097180.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132663319|gb|ABO34965.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 397 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 22/107 (20%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------- 55 V ++ CI C DC + CP D E +A+ P C CG+C+ CPVDAI Sbjct: 198 VDSDLCIGC--GDCTDKCPKDLIVLNE-MIAVPPKGCPACGLCKAACPVDAIDLVVEYAP 254 Query: 56 -KPDTEPGLELWLKINSEY----ATQWPN-----ITTKKESLPSAAK 92 KP T+ G+ +W + Y A + PN + K LPS AK Sbjct: 255 PKPVTDEGI-VWDEEKCAYCGPCALKCPNNAITVVNPKGLELPSRAK 300 >gi|120014|sp|P00193|FER_PEPAS RecName: Full=Ferredoxin Length = 54 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 YV+ ++CI C C CPV+ + + AI D CIDCG C CPV A P+ Sbjct: 1 AYVINDSCIACGA--CKPECPVN--IQQGSIYAIDADSCIDCGSCASVCPVGAPNPE 53 >gi|332526726|ref|ZP_08402828.1| RnfABCDGE type electron transport complex subunit B [Rubrivivax benzoatilyticus JA2] gi|332111129|gb|EGJ11161.1| RnfABCDGE type electron transport complex subunit B [Rubrivivax benzoatilyticus JA2] Length = 219 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 VV E+ CI C T C++ CPVDC + D C CG+C P CPVD I Sbjct: 79 VVDESWCIGC--TLCLKACPVDCIVGANKRMHTVIDALCTGCGLCLPACPVDCI 130 >gi|322806085|emb|CBZ03652.1| NAD-reducing hydrogenase subunit HoxF [Clostridium botulinum H04402 065] Length = 631 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T+ CI C T C CPV C + ++F I+ ++CI CG C CPV AI Sbjct: 575 LHYEITDKCIGC--TKCARGCPVSCIIGKVKEKHF--INQEKCIKCGNCYSVCPVGAI 628 >gi|318604983|emb|CBY26481.1| formate hydrogenlyase subunit 2 [Yersinia enterocolitica subsp. palearctica Y11] Length = 215 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ILC+H + C VCPV+ N + + CI C +C CP AI P Sbjct: 51 ILCRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 101 >gi|289626586|ref|ZP_06459540.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647568|ref|ZP_06478911.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867251|gb|EGH01960.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 290 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|330840005|ref|YP_004414585.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] gi|329747769|gb|AEC01126.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] Length = 357 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 17 CVEVCPVDCF---YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CV +CP EGE+F LA P C CG+C CP A++ P + W Sbjct: 275 CVRLCPHGALAAEIEGEDFVLAFTPQLCTACGLCTARCPKSALRLAASPTAKRW 328 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C +VCP F G HPD CI+CG+C CP A++ Sbjct: 23 CEDVCPAGAFRWG----VPHPDLCIECGLCTAVCPAAAVE 58 >gi|309776266|ref|ZP_07671256.1| pyruvate formate-lyase-activating enzyme [Erysipelotrichaceae bacterium 3_1_53] gi|308915985|gb|EFP61735.1| pyruvate formate-lyase-activating enzyme [Erysipelotrichaceae bacterium 3_1_53] Length = 308 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +CI C+ CV +CP E + I P +CI C C CPV A+ + E Sbjct: 54 DCIQCQ--SCVNICPKHAISLSEQRIQIDPRQCIGCMQCLSFCPVHALSNEGE 104 >gi|190151004|ref|YP_001969529.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249916|ref|ZP_07336118.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253741|ref|ZP_07339877.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248722|ref|ZP_07530735.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250968|ref|ZP_07532894.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253340|ref|ZP_07535212.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255583|ref|ZP_07537388.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260034|ref|ZP_07541746.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262162|ref|ZP_07543813.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264361|ref|ZP_07545949.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916135|gb|ACE62387.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647397|gb|EFL77617.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650979|gb|EFL81133.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854649|gb|EFM86839.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856996|gb|EFM89126.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859204|gb|EFM91245.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861432|gb|EFM93421.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865870|gb|EFM97746.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868139|gb|EFM99964.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870313|gb|EFN02069.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 205 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ + F+ ++ D CI C C CP DA + Sbjct: 59 FAYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEDTCIGCRYCSMACPYDAPQYSA 118 Query: 60 EPG 62 G Sbjct: 119 SKG 121 >gi|121535868|ref|ZP_01667666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305533|gb|EAX46477.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 235 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP-------VDAIKPDTE 60 C C++ CV VCPV Y+G++ + I +CI C C CP A D Sbjct: 81 CFQCENPPCVPVCPVKATYKGDDGIVVIDYTKCIGCRSCVAACPYGARTFDAGAYYTDGT 140 Query: 61 PGLELWLKINS-EYATQWPNITTKKESLPSAAK 92 P ++ + K + EY W + + SA K Sbjct: 141 PAVQEYEKAAAFEYGKAWRRDSKHASIVGSARK 173 >gi|331010114|gb|EGH90170.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 290 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|304315261|ref|YP_003850408.1| F420-non-reducing hydrogenase, subunit B, polyferredoxin [Methanothermobacter marburgensis str. Marburg] gi|313104135|sp|P60232|MVHB_METTM RecName: Full=Polyferredoxin protein mvhB gi|302588720|gb|ADL59095.1| F420-non-reducing hydrogenase, subunit B, polyferredoxin [Methanothermobacter marburgensis str. Marburg] Length = 412 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 E CI C CVE CP D + L + P C CG+CE CPVDAI D E G Sbjct: 214 EACIGCNT--CVEACPGDFIVPKSSNLTVELPAICTACGLCEQLCPVDAIDLDVELG 268 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 20/61 (32%) Query: 9 CILCKHTDCVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPECPVDA 54 C++C+ CV++CPV EG F+A +C+ CG+C PECPVDA Sbjct: 107 CVMCQK--CVDICPVGVIGVEGIKEPAKVELEIEGPIFIA----DCVGCGMCVPECPVDA 160 Query: 55 I 55 I Sbjct: 161 I 161 >gi|291278907|ref|YP_003495742.1| electron transport complex protein RnfB [Deferribacter desulfuricans SSM1] gi|290753609|dbj|BAI79986.1| electron transport complex protein RnfB [Deferribacter desulfuricans SSM1] Length = 260 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI C+ C + CP D N IH ++CI+CG CE CP AI Sbjct: 208 VCSVGCIGCRL--CAKNCPEDAITVENNLAYIHAEKCINCGKCEEVCPTKAI 257 >gi|265751809|ref|ZP_06087602.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|263236601|gb|EEZ22071.1| ferredoxin [Bacteroides sp. 3_1_33FAA] Length = 309 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTEPGL 63 +CI C CV+VCP + N I P +C C CEPECP AI+ P +P + Sbjct: 223 SCIGC--GKCVKVCPFEAITLENNLAYIDPAKCKSCRKCEPECPKGAIQAINFPPRKPKV 280 Query: 64 E 64 E Sbjct: 281 E 281 >gi|218778937|ref|YP_002430255.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760321|gb|ACL02787.1| OhcB1 (iron-sulfur binding domain protein with TAT signal) [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 T V C+ C + C ++CP + +N + IHPD C+ C+ CP D P+ + Sbjct: 117 TITVPRRCMHCTNPPCADLCPFGAARKLKNGITRIHPDICLGGAKCKLVCPWDI--PERQ 174 Query: 61 PGLELWLKINSEYA 74 G+ +L++ +A Sbjct: 175 TGVGPYLQVLPNFA 188 >gi|325679199|ref|ZP_08158790.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324109128|gb|EGC03353.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 478 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C +VCP N +A I +C++CG C CP AI P Sbjct: 94 YEVTDSCRGCLAHRCEDVCPRGAISFDHNHVAHIDKSKCVECGRCSKVCPYSAITNRVRP 153 >gi|284050914|ref|ZP_06381124.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrospira platensis str. Paraca] gi|291569756|dbj|BAI92028.1| ferredoxin-like protein [Arthrospira platensis NIES-39] Length = 75 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C + +G ++ I D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVGACPVACIHPGPGKNTKGTDWYWIDFDTCIDCGICLQVCPVEGAIVAEERPELQ 71 >gi|260428995|ref|ZP_05782972.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Citreicella sp. SE45] gi|260419618|gb|EEX12871.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Citreicella sp. SE45] Length = 249 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVPVCPTGASYKRVEDGIVLVNEDACIGCGLCAWACPYGAREMDLAAGV 138 >gi|150402674|ref|YP_001329968.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Methanococcus maripaludis C7] gi|150033704|gb|ABR65817.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanococcus maripaludis C7] Length = 85 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C++ C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCEN--CYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKTERE 83 >gi|145298799|ref|YP_001141640.1| hydrogenase 4 Fe-S subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142851571|gb|ABO89892.1| hydrogenase 4 Fe-S subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 231 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C+H D C++VCPV+ + + + ++ CI C +C CP AI + G Sbjct: 49 VQCRHCDDAPCIKVCPVEAIAQTGDCVQLNESLCIGCNLCAVACPFGAI----QSGGSRP 104 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + + Y T P + + S PS + G++ E S PG ++ Sbjct: 105 VAMANSYDTYIP--CSIRSSNPSTSA--GLRCFGEDLLSWEPGVRS 146 >gi|21227754|ref|NP_633676.1| ferredoxin [Methanosarcina mazei Go1] gi|20906156|gb|AAM31348.1| Ferredoxin [Methanosarcina mazei Go1] Length = 59 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 17 CVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV+ CPV+ E E + DEC+DCG CE CP+ AIK Sbjct: 16 CVDECPVEAIIIDEDEGCAVVDEDECVDCGACEDVCPIGAIK 57 >gi|154174046|ref|YP_001408940.1| formate dehydrogenase iron-sulfur subunit [Campylobacter curvus 525.92] gi|112804000|gb|EAU01344.1| formate dehydrogenase iron-sulfur subunit [Campylobacter curvus 525.92] Length = 190 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Query: 10 ILCKH-TD--CVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 I C+H TD C +VCPVDCFY + + +H +CI C C CP A Sbjct: 54 IACQHCTDAPCEQVCPVDCFYIRADGIVLHDKHKCIGCAYCLYACPFGA 102 >gi|170727211|ref|YP_001761237.1| NADH-quinone oxidoreductase subunit I [Shewanella woodyi ATCC 51908] gi|226737416|sp|B1KJV5|NUOI_SHEWM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|169812558|gb|ACA87142.1| NADH-quinone oxidoreductase, chain I [Shewanella woodyi ATCC 51908] Length = 171 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 23/92 (25%) Query: 7 ENCILCKHTDCVEVCPVDCF-----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC +E E+F I+ CI CG CE CP AI Sbjct: 49 ERCVACNL--CSVACPVDCISVVKTEKEDGRWEAESF-TINFSRCIMCGFCEEACPTHAI 105 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESL 87 + P +E+ +EY Q N+ +KE L Sbjct: 106 Q--LTPDVEM-----AEYDRQ--NLVFEKEHL 128 >gi|330966554|gb|EGH66814.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 310 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 102 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCVAPCPVDCIE 156 >gi|307257755|ref|ZP_07539512.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863661|gb|EFM95587.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 205 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ + F+ ++ D CI C C CP DA + Sbjct: 59 FAYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEDTCIGCRYCSMACPYDAPQYSA 118 Query: 60 EPG 62 G Sbjct: 119 SKG 121 >gi|266621852|ref|ZP_06114787.1| ferredoxin, 4Fe-4S [Clostridium hathewayi DSM 13479] gi|288866485|gb|EFC98783.1| ferredoxin, 4Fe-4S [Clostridium hathewayi DSM 13479] Length = 83 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C ++CP+D + +G+ ++P+EC C CE +CPV AI Sbjct: 8 SKCISC--TTCAQICPLDVYGPVIKGQKPEVLYPNECWHCRACEFDCPVGAI 57 >gi|332161103|ref|YP_004297680.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665333|gb|ADZ41977.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 213 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ILC+H + C VCPV+ N + + CI C +C CP AI P Sbjct: 49 ILCRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 99 >gi|164686864|ref|ZP_02210892.1| hypothetical protein CLOBAR_00460 [Clostridium bartlettii DSM 16795] gi|164604254|gb|EDQ97719.1| hypothetical protein CLOBAR_00460 [Clostridium bartlettii DSM 16795] Length = 273 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M V E CI C + CV+ CPV +N I+ + C CG C CPV+A+ D Sbjct: 1 MFSVNKEKCIGC--SQCVKDCPVSTISLVDNKAEINNERCFKCGHCIAICPVEAVSTD 56 >gi|18314097|ref|NP_560764.1| indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift [Pyrobaculum aerophilum str. IM2] gi|18161681|gb|AAL64946.1| indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift [Pyrobaculum aerophilum str. IM2] Length = 390 Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD--TEPGLELW 66 + P C+ CG+C CP +A KP+ E LELW Sbjct: 354 VDPALCVGCGICAEVCPFNAFKPEGKREAWLELW 387 >gi|312136492|ref|YP_004003829.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] gi|311224211|gb|ADP77067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] Length = 164 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C CK+ CVE CP + D+CI CG C ECP AI + L Sbjct: 44 CHHCKNAPCVEACPTG----AMKINYVDTDKCIGCGSCALECPFGAISIKNNVAHKCNLC 99 Query: 69 INSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 N +Y TK +L K +K+K E+Y + Sbjct: 100 DNLDYPACVRACPTKALTLIDVEKF--IKRKKEEYLN 134 >gi|303243651|ref|ZP_07329992.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485893|gb|EFL48816.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 426 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 9/80 (11%) Query: 3 YVVTEN-CILCKHTDCVEVCPVD--CFYEGENFL-AIHPDECIDCGVCEPECPVDAI--- 55 Y++ EN CI C+ C +VC VD E L I+P+ C+ CG+C ECPVDAI Sbjct: 312 YIIDENKCIGCRI--CYKVCNVDNAISISSETRLPYINPEYCVRCGLCYRECPVDAIGLT 369 Query: 56 KPDTEPGLELWLKINSEYAT 75 K + G KI E+ + Sbjct: 370 KTEEVFGRYKLRKIRDEFES 389 >gi|298488743|ref|ZP_07006772.1| Electron transport complex protein rnfB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156816|gb|EFH97907.1| Electron transport complex protein rnfB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 290 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|261403798|ref|YP_003248022.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370791|gb|ACX73540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 64 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + +NC+ C CV CP + I+ ++C++CG+C CP+DAIK DT Sbjct: 6 ILKNCVGC--GTCVVFCPKKAI-KTYGVAIINKEKCVNCGICVKYCPIDAIKVDT 57 >gi|111027053|ref|YP_709031.1| polysulphide reductase [Rhodococcus jostii RHA1] gi|110825592|gb|ABH00873.1| probable polysulphide reductase [Rhodococcus jostii RHA1] Length = 509 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPD 58 C C CV++CP ++ ++ + +E CI C C CP DA+ D Sbjct: 60 CNHCTDAPCVKICPTQALFKRDDGIVDFDNERCIGCKSCMQACPYDALYID 110 >gi|253989007|ref|YP_003040363.1| NADH dehydrogenase subunit I [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780457|emb|CAQ83619.1| NADH-quinone oxidoreductase subunit I [Photorhabdus asymbiotica] Length = 180 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|240948525|ref|ZP_04752898.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus minor NM305] gi|240297033|gb|EER47604.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus minor NM305] Length = 205 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYLSISCNHCSDPACTKVCPTGAMHKNEDGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 KKG 121 >gi|281358774|ref|ZP_06245249.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] gi|281314729|gb|EFA98767.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] Length = 582 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y + C C CV CPV + A+ P+ C+ CG C CPV A + G Sbjct: 8 YTIEAECQDC--YKCVRHCPVKAIRVRDGHAAVIPELCVACGKCVEVCPVKAKQVRNGTG 65 Query: 63 -LELWLKINSE-YATQWPNITTKKESLPSAAKMDGVKQ 98 L L L + YA+ P+ ++ +++ S + +KQ Sbjct: 66 RLRLLLSEPAPVYASLAPSWVSEFKNVASGQLIRALKQ 103 >gi|167629546|ref|YP_001680045.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein, putative [Heliobacterium modesticaldum Ice1] gi|119675286|gb|ABL89192.1| ferredoxin-like protein [Heliobacterium modesticaldum] gi|167592286|gb|ABZ84034.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein, putative [Heliobacterium modesticaldum Ice1] Length = 54 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +++ C+ C C + CPV+ +G+ + D CIDCG C CP AI Sbjct: 1 MVYKISDACVACGA--CEDACPVNAIIKGDVYSI--TDACIDCGTCADTCPAGAIS 52 >gi|257063524|ref|YP_003143196.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] gi|256791177|gb|ACV21847.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] Length = 447 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Query: 17 CVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+++CP + +GE P C++CGVC CP +AIK Sbjct: 324 CMQMCPTGSIHHTLGDGEFVYEFSPGTCVNCGVCVASCPKEAIK 367 >gi|237752820|ref|ZP_04583300.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Helicobacter winghamensis ATCC BAA-430] gi|229376309|gb|EEO26400.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Helicobacter winghamensis ATCC BAA-430] Length = 189 Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTE 60 V +C +C+HT CV VCP + EN + I +C+ C C CP +A + P+T+ Sbjct: 55 VRHSCEMCEHTPCVTVCPTHASFMDENGIVDIDASQCVGCLYCVVACPYNARYVNPETK 113 >gi|320101259|ref|YP_004176851.1| hypothetical protein Desmu_1067 [Desulfurococcus mucosus DSM 2162] gi|319753611|gb|ADV65369.1| protein of unknown function DUF362 [Desulfurococcus mucosus DSM 2162] Length = 61 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 1 MTYVVTE--NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 MT ++ + C LC CVE CP F E + + + C++C CEP CP A+K Sbjct: 1 MTRILLDESKCTLCML--CVEYCPAFVFTLREGRIVVEAERCVECYACEPLCPAGAVK 56 >gi|91780908|ref|YP_556115.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] gi|91693568|gb|ABE36765.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] Length = 414 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C CP AI Sbjct: 18 EICIRC--NTCEETCPIDAITHDDNNYVVKADVCNGCMACVSPCPTGAI 64 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|15679144|ref|NP_276261.1| polyferredoxin (MvhB) [Methanothermobacter thermautotrophicus str. Delta H] gi|41017307|sp|Q50784|MVHB_METTH RecName: Full=Polyferredoxin protein mvhB gi|2622237|gb|AAB85622.1| polyferredoxin (MvhB) [Methanothermobacter thermautotrophicus str. Delta H] Length = 412 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 20/69 (28%) Query: 9 CILCKHTDCVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPECPVDA 54 C++C+ CV++CPV EG F+A +C+ CG+C PECPVDA Sbjct: 107 CVMCQK--CVDICPVGVIGVEGIKEPAKVELEIEGPIFIA----DCVGCGMCVPECPVDA 160 Query: 55 IKPDTEPGL 63 I D G+ Sbjct: 161 ITLDKVGGV 169 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 13/84 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI---------K 56 + CI C CVE CP D + L + P C CG+CE CPVDAI K Sbjct: 214 DACIGCNT--CVEACPGDFIVPRTSNLTVELPAICTACGLCEQLCPVDAIDLEVELGPAK 271 Query: 57 PDTEPGLELWLKINSEYATQWPNI 80 P +E GL +W + ++ NI Sbjct: 272 PASEEGL-VWDEEKCDFIGACANI 294 >gi|330973101|gb|EGH73167.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 291 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCIAPCPVDCIE 137 >gi|330877327|gb|EGH11476.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 291 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCVAPCPVDCIE 137 >gi|312137196|ref|YP_004004533.1| formylmethanofuran dehydrogenase, subunit h [Methanothermus fervidus DSM 2088] gi|311224915|gb|ADP77771.1| formylmethanofuran dehydrogenase, subunit H [Methanothermus fervidus DSM 2088] Length = 154 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 + NF + D CI CG C +CP+DAIK L K+NS+ Sbjct: 88 QNRNFKVLVKDSCIGCGTCSEKCPMDAIKISG-----LKAKVNSKL 128 >gi|91975987|ref|YP_568646.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] gi|91682443|gb|ABE38745.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Rhodopseudomonas palustris BisB5] Length = 217 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C + CVEVCP E+ + I D CI C C CP DA + +P Sbjct: 59 CMHCANPPCVEVCPTTATRRREDGLVTIDYDICIGCANCIMACPYDARSIEHQPRYAFGK 118 Query: 68 KINSEYATQWP 78 + E A P Sbjct: 119 AMTHEIARSSP 129 >gi|163847096|ref|YP_001635140.1| cyclic nucleotide-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222524931|ref|YP_002569402.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] gi|163668385|gb|ABY34751.1| cyclic nucleotide-binding [Chloroflexus aurantiacus J-10-fl] gi|222448810|gb|ACM53076.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] Length = 477 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI------KP 57 V ++C C +CVEVCP D + + C CG C CP DA+ + Sbjct: 353 VLDHCRQCSVGAECVEVCPEDAIERVDTGALRITNRCTGCGECVSACPYDAVTSVPRTRH 412 Query: 58 DTEPGLELWLKINSEYATQWP 78 T P EL+ ++ P Sbjct: 413 STGPLWELFRRLQQRVRPSIP 433 >gi|312138684|ref|YP_004006020.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodococcus equi 103S] gi|311888023|emb|CBH47335.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodococcus equi 103S] Length = 315 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI----KPDTE 60 ++ C C H C++VCP + E + + D C CG C P CP I P + Sbjct: 126 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQNDICNGCGYCLPACPYGVIDRREGPAGD 185 Query: 61 PGLELWLK 68 P + L K Sbjct: 186 PAVGLAQK 193 >gi|254448470|ref|ZP_05061930.1| electron transport complex, rnfaBcdge type, b subunit [gamma proteobacterium HTCC5015] gi|198261853|gb|EDY86138.1| electron transport complex, rnfaBcdge type, b subunit [gamma proteobacterium HTCC5015] Length = 200 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPGLE 64 E CI C T C++ CPVD + + DEC C +C CPVD I D +P + Sbjct: 115 EGCIGC--TLCIQACPVDAILGAAKQMHTVITDECTGCELCVEPCPVDVITMEDIQPTTQ 172 Query: 65 LW 66 W Sbjct: 173 TW 174 >gi|149734|gb|AAB02352.1| mvhB [Methanothermobacter thermautotrophicus] Length = 412 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 20/69 (28%) Query: 9 CILCKHTDCVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPECPVDA 54 C++C+ CV++CPV EG F+A +C+ CG+C PECPVDA Sbjct: 107 CVMCQK--CVDICPVGVIGVEGIKEPAKVELEIEGPIFIA----DCVGCGMCVPECPVDA 160 Query: 55 IKPDTEPGL 63 I D G+ Sbjct: 161 ITLDKVGGV 169 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 13/84 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI---------K 56 + CI C CVE CP D + L + P C CG+CE CPVDAI K Sbjct: 214 DACIGCNT--CVEACPGDFIVPRTSNLTVELPAICTACGLCEQLCPVDAIDLEVELGPAK 271 Query: 57 PDTEPGLELWLKINSEYATQWPNI 80 P +E GL +W + ++ NI Sbjct: 272 PASEEGL-VWDEEKCDFIGACANI 294 >gi|260905039|ref|ZP_05913361.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brevibacterium linens BL2] Length = 381 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 183 CKHCTHAGCLDVCPTGALFRTEFDTVVVQNDVCNGCGTCVAGCPFGVIE 231 >gi|257457555|ref|ZP_05622722.1| 4Fe-4S binding domain protein [Treponema vincentii ATCC 35580] gi|257444941|gb|EEV20017.1| 4Fe-4S binding domain protein [Treponema vincentii ATCC 35580] Length = 56 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +++ C+ C C CPV E I D CI CG C CP +AI Sbjct: 1 MAYKISDACVNCGA--CEGECPVGAISEANGARVIDADACISCGACAGVCPTEAIS 54 >gi|207721377|ref|YP_002251818.1| ferredoxin protein [Ralstonia solanacearum MolK2] gi|206586536|emb|CAQ17123.1| ferredoxin protein [Ralstonia solanacearum MolK2] Length = 708 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + + L++ C+ CG+CE CP DAI Sbjct: 580 CTLC--MACVSACPSQALRDQAEQPVLSMIERNCVQCGLCETTCPEDAI 626 >gi|159905554|ref|YP_001549216.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887047|gb|ABX01984.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 167 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C+EVCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAI 90 >gi|154148996|ref|YP_001406324.1| ferredoxin [Campylobacter hominis ATCC BAA-381] gi|153805005|gb|ABS52012.1| ferredoxin [Campylobacter hominis ATCC BAA-381] Length = 82 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C + CPV YE E I PD C +C C ECPV+ Sbjct: 1 MSLMITKDCICCDA--CKDECPVGAIYEDEPIYVIDPDLCCECVNDYSEPACIVECPVEC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IVPD 62 >gi|302184712|ref|ZP_07261385.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae 642] Length = 291 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIIDECTGCDLCIAPCPVDCIE 137 >gi|300865547|ref|ZP_07110328.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oscillatoria sp. PCC 6506] gi|300336453|emb|CBN55478.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oscillatoria sp. PCC 6506] Length = 75 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 DCV+ CPV C +EG ++ I CIDCG+C CPV AI + P L+ Sbjct: 14 ADCVDACPVACIHEGPGKNVKGTDWYWIDFQTCIDCGICLQVCPVAGAIVAEERPELQ 71 >gi|262279872|ref|ZP_06057657.1| NADH:ubiquinone oxidoreductase [Acinetobacter calcoaceticus RUH2202] gi|262260223|gb|EEY78956.1| NADH:ubiquinone oxidoreductase [Acinetobacter calcoaceticus RUH2202] Length = 263 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|227328564|ref|ZP_03832588.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 674 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTSP 108 >gi|126725238|ref|ZP_01741081.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706402|gb|EBA05492.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] Length = 249 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL- 63 ++C+ C CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 80 KSCLHCDDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGAREMDQAEGVM 139 Query: 64 -ELWLKINSEYATQWPNITTKK---ESLPSAAKMDG 95 + L ++ Y P + + + PS A+ G Sbjct: 140 KKCTLCVDRIYNENLPEVDREPACVRTCPSGARHFG 175 >gi|327310274|ref|YP_004337171.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Thermoproteus uzoniensis 768-20] gi|326946753|gb|AEA11859.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Thermoproteus uzoniensis 768-20] Length = 595 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Query: 3 YVVTENCILCKHTDCVEVC-PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVV + C C V C + +G+ + I P C C +C CP DAIKP TEP Sbjct: 526 YVVADKCRSCGICYNVLKCYAIAKLPDGKAW--IDPSLCSGCSMCAQVCPYDAIKP-TEP 582 Query: 62 G-----LELW 66 LELW Sbjct: 583 EKVGKWLELW 592 >gi|312881025|ref|ZP_07740825.1| Fe-S cluster domain protein [Aminomonas paucivorans DSM 12260] gi|310784316|gb|EFQ24714.1| Fe-S cluster domain protein [Aminomonas paucivorans DSM 12260] Length = 576 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y T NC C C+ CPV E + P+ C+ CG+C CP A Sbjct: 8 YTQTNNCHDC--FKCLRQCPVKAIRLEEGHARVLPELCVSCGLCVEVCPAKA 57 >gi|268609516|ref|ZP_06143243.1| hypothetical protein RflaF_08470 [Ruminococcus flavefaciens FD-1] Length = 205 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++CI C C+ CP C E L I + C+ CG C CPV A+ Sbjct: 153 YFVTDDCIRCG--SCLSDCPQSCIELKEKAL-IRQENCLHCGNCAAVCPVGAV 202 >gi|227501325|ref|ZP_03931374.1| hydrogenase large subunit domain protein [Anaerococcus tetradius ATCC 35098] gi|227216558|gb|EEI81964.1| hydrogenase large subunit domain protein [Anaerococcus tetradius ATCC 35098] Length = 508 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CV VCP + I D+CI CG C CP AI P Sbjct: 115 VTDQCHACIGHPCVNVCPKNAVSYSAKGAYIDQDKCIKCGKCVDACPYHAINHQKRP 171 >gi|268591456|ref|ZP_06125677.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291313110|gb|EFE53563.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 212 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA--IK 56 Y ++ +C C CV+ CP + EG+ + ++ D+C+ CG C CP A + Sbjct: 70 FAYTLSISCNHCADPMCVKNCPTTAMHKREGDGIVMVNTDKCVGCGTCAWSCPYGAPQMN 129 Query: 57 PDTE 60 P+T+ Sbjct: 130 PETK 133 >gi|207742645|ref|YP_002259037.1| ferredoxin protein [Ralstonia solanacearum IPO1609] gi|206594039|emb|CAQ60966.1| ferredoxin protein [Ralstonia solanacearum IPO1609] Length = 708 Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + + L++ C+ CG+CE CP DAI Sbjct: 580 CTLC--MACVSACPSQALRDQAEQPVLSMIERNCVQCGLCETTCPEDAI 626 >gi|123443013|ref|YP_001006988.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089974|emb|CAL12831.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 213 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ILC+H + C VCPV+ N + + CI C +C CP AI P Sbjct: 49 ILCRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 99 >gi|304411591|ref|ZP_07393204.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307306633|ref|ZP_07586375.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|304350118|gb|EFM14523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910601|gb|EFN41030.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] Length = 188 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH ++C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPYKVRFMNPETK 114 >gi|56477086|ref|YP_158675.1| formate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] gi|56313129|emb|CAI07774.1| Formate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] Length = 201 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C+ C C+ VCP + Y E + +H D CI CG C CP A Sbjct: 55 CMHCSDAPCIAVCPTNVIYHTEEGVVLHDKDGCIGCGYCFYACPFGA 101 >gi|253690638|ref|YP_003019828.1| glutamate synthase, small subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757216|gb|ACT15292.1| glutamate synthase, small subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 674 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNP 108 >gi|206901578|ref|YP_002250818.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740681|gb|ACI19739.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] Length = 266 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Query: 16 DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DCV+VCP D Y GE+ L I ++C CG+C CP Sbjct: 147 DCVKVCPFDAIYMGEDGLPKIDIEKCTGCGLCVKACP 183 >gi|154500597|ref|ZP_02038635.1| hypothetical protein BACCAP_04270 [Bacteroides capillosus ATCC 29799] gi|150270486|gb|EDM97795.1| hypothetical protein BACCAP_04270 [Bacteroides capillosus ATCC 29799] Length = 557 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CPV ++ I PDECI CG C CP +A ++ D L YA Sbjct: 18 CIRNCPVKSIRFSDHQANIVPDECILCGRCFVACPQNAKEVRDDLPAARALLASGAPVYA 77 Query: 75 TQWPNITTKKESLPSAAKMDGVKQ 98 + P+ E + ++ +KQ Sbjct: 78 SVAPSFVAAWEGVTISSMEAALKQ 101 >gi|83590757|ref|YP_430766.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Moorella thermoacetica ATCC 39073] gi|83573671|gb|ABC20223.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Moorella thermoacetica ATCC 39073] Length = 96 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 21/39 (53%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C CP CF GE + ++ D C CG+C ECP A+ Sbjct: 43 CWLFCPEGCFRRGEEAVTLNLDFCKGCGICVTECPRQAL 81 >gi|146304360|ref|YP_001191676.1| thiamine pyrophosphate binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702610|gb|ABP95752.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Metallosphaera sedula DSM 5348] Length = 607 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 18/26 (69%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I+P +CI CG C P CP +AIK + E Sbjct: 571 INPQDCIGCGACVPVCPFNAIKLEGE 596 >gi|114566570|ref|YP_753724.1| signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337505|gb|ABI68353.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 696 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPEC 50 ENCI C C+ VCPV +G N + H CI CG C C Sbjct: 13 ENCINCHQ--CIAVCPVKICSDGSGNVVKFHNHLCIGCGRCIEAC 55 >gi|325916606|ref|ZP_08178869.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537160|gb|EGD08893.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas vesicatoria ATCC 35937] Length = 139 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 80 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 134 >gi|323978823|gb|EGB73904.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 162 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVQALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q + ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGSACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|307299220|ref|ZP_07579021.1| dihydroorotate dehydrogenase family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915016|gb|EFN45402.1| dihydroorotate dehydrogenase family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 359 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CVEVCP E + + EC CG+CE CPV AI Sbjct: 317 CVEVCPYFALSLQEK-VEVDSAECFGCGLCESICPVAAI 354 >gi|302344389|ref|YP_003808918.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301641002|gb|ADK86324.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 356 Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C++ C + G++ LA I D CI CG+C CP +A+ +P +L Sbjct: 280 CTGCE--TCLDRCQMKAIVMGDDGLARIDLDRCIGCGLCVTTCPTEALTLQAKPSAQL 335 >gi|256838495|ref|ZP_05544005.1| flavodoxin [Parabacteroides sp. D13] gi|256739414|gb|EEU52738.1| flavodoxin [Parabacteroides sp. D13] Length = 268 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ++ T CI C+ C+++CP+ F + L CI C +C CP +I Sbjct: 183 VVFLNTSTCINCE--KCIKICPMHIFARRDTVLPTDEKNCIQCRLCADNCPTSSIYIHES 240 Query: 61 PGLELWLKINSEYATQWPN 79 L + I ++ + N Sbjct: 241 FLNGLRIAIRESFSDKLQN 259 >gi|313114957|ref|ZP_07800452.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622717|gb|EFQ06177.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 516 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSIIDQDKCIKCGRCVGVCPYNAIVKTERP 177 >gi|307266103|ref|ZP_07547648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918885|gb|EFN49114.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 372 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +V + C C+ C+ CPV+ I P CI CG C C IKP + Sbjct: 190 IVGKGCTACQM--CIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYATQWPNITTKKESL 87 + +++ +EYA + +TKK + Sbjct: 248 DAFVERMTEYA--YGAYSTKKGKI 269 >gi|266623462|ref|ZP_06116397.1| putative 4Fe-4S binding domain protein [Clostridium hathewayi DSM 13479] gi|288864757|gb|EFC97055.1| putative 4Fe-4S binding domain protein [Clostridium hathewayi DSM 13479] Length = 203 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++CI C C E CP C G I C+ CG+C+ CPV A+ Sbjct: 149 YFITDDCIGCGQ--CTESCPQKCIAPGVP-CRIDGSHCLRCGLCQEVCPVGAV 198 >gi|227355469|ref|ZP_03839865.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|227164456|gb|EEI49340.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 209 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +T +C C CV+ CP ++ G+ + + +C+ CG C CP A + + Sbjct: 70 FAYTLTISCNHCDDPICVKNCPTTAMHKRPGDGIVRVDTSKCVGCGYCSWSCPYGAPQMN 129 Query: 59 TEPG 62 TE G Sbjct: 130 TETG 133 >gi|148262563|ref|YP_001229269.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146396063|gb|ABQ24696.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 96 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPG----- 62 CI C CVEVCP F E I D C++CG C CP AIK D G Sbjct: 20 CIGCGR--CVEVCPHKVFSLAEKRSRIVDFDGCMECGACAKNCPTAAIKVDAGVGCASGL 77 Query: 63 LELWLK 68 + WL+ Sbjct: 78 ITEWLR 83 >gi|88706625|ref|ZP_01104328.1| Electron transport complex protein rnfB [Congregibacter litoralis KT71] gi|88699121|gb|EAQ96237.1| Electron transport complex protein rnfB [Congregibacter litoralis KT71] Length = 202 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +++ E+CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 113 VAFIIEEDCIGC--TKCIQACPVDAILGAAKQMHTVIASECTGCDLCVDPCPVDCIE 167 >gi|289662868|ref|ZP_06484449.1| ferredoxin [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 139 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 80 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 134 >gi|291286605|ref|YP_003503421.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290883765|gb|ADD67465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 248 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 ++ C C + CVE CP+ Y+ E + + ++ + CI CG C+ CP DA Sbjct: 104 ISLACNHCTNPACVEACPMGIIYKEEEYGLVLVNNETCISCGKCKEACPWDA 155 >gi|167856054|ref|ZP_02478797.1| electron transport complex protein RnfC [Haemophilus parasuis 29755] gi|167852803|gb|EDS24074.1| electron transport complex protein RnfC [Haemophilus parasuis 29755] Length = 629 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA----------IHPDECIDCGVCEPECP 51 NCI C + C + CPVD + + A H D CI+CGVC CP Sbjct: 378 NCIRC--SSCSDACPVDLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCP 429 >gi|149909813|ref|ZP_01898464.1| putative oxidoreductase [Moritella sp. PE36] gi|149807145|gb|EDM67101.1| putative oxidoreductase [Moritella sp. PE36] Length = 134 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 12/63 (19%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIKP 57 NC+ C+ C ++CP DC YE E I C+ CG+CE CP DAIK Sbjct: 10 NCVGCEL--CAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDACPADAIKL 67 Query: 58 DTE 60 E Sbjct: 68 GQE 70 >gi|148266186|ref|YP_001232892.1| sigma-54 dependent trancsriptional regulator [Geobacter uraniireducens Rf4] gi|146399686|gb|ABQ28319.1| sigma54 specific transcriptional regulator, Fis family [Geobacter uraniireducens Rf4] Length = 755 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +TE C C CV CPV +N+ I + CI CG C CP A Sbjct: 7 LTEKCRKC--YSCVRSCPVKAIKVEKNYSEIIFERCIGCGNCLSNCPQHA 54 >gi|67474180|ref|XP_652839.1| Fe-hydrogenase [Entamoeba histolytica HM-1:IMSS] gi|27652439|gb|AAO17820.1| putative long iron-dependent hydrogenase 2 [Entamoeba histolytica] gi|56469743|gb|EAL47464.1| Fe-hydrogenase, putative [Entamoeba histolytica HM-1:IMSS] Length = 504 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C CP C GE+ A I+ + CI CG C CP AI + P Sbjct: 113 YFVTQACEGCTSRPCSVNCPKKCISFGEDGRAVINQNNCIKCGRCYKFCPYGAIISKSVP 172 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 10 ILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 I+ K CV+ CP + E I ++CI+CG C CP AI P + Sbjct: 166 IISKSVPCVKACPCGAMLDSPEGVKTIDFEKCINCGGCMRACPFGAILPRS 216 >gi|330957741|gb|EGH58001.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 291 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIIDECTGCDLCIAPCPVDCI 136 >gi|299771076|ref|YP_003733102.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter sp. DR1] gi|298701164|gb|ADI91729.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter sp. DR1] Length = 263 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|289670256|ref|ZP_06491331.1| ferredoxin [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 139 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 80 VAWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 134 >gi|284049221|ref|YP_003399560.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] gi|283953442|gb|ADB48245.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] Length = 418 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 K DCV+VC D + + + I PD+C+ C C C ++++K Sbjct: 63 KQADCVKVCQWDAMHPSADGVQIDPDKCVGCQACVDACKLESLK 106 >gi|258516351|ref|YP_003192573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780056|gb|ACV63950.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 55 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M+Y +TE C C C + CP D EG + I ++C +CG C ECP AI Sbjct: 1 MSYRITEACEACGT--CKDACPNDAIIEG-DIYKIDAEKCAECGACVEECPTGAI 52 >gi|170758777|ref|YP_001788618.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] gi|169405766|gb|ACA54177.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] Length = 497 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|152999082|ref|YP_001364763.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160873678|ref|YP_001552994.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|217971766|ref|YP_002356517.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|151363700|gb|ABS06700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160859200|gb|ABX47734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|217496901|gb|ACK45094.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] gi|315265908|gb|ADT92761.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 188 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH ++C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPYKVRFMNPETK 114 >gi|294643271|ref|ZP_06721097.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294806465|ref|ZP_06765306.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|292641394|gb|EFF59586.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294446328|gb|EFG14954.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 402 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 11/64 (17%) Query: 11 LCKHTDC------VEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+H +C V VC + + E+ + ++ D CIDCG+C+ CP + + Sbjct: 5 ICQHNECTGCSACVNVCGKNAIFYCEDKIGFRYPVVNLDLCIDCGLCQKVCPNNVEVDKS 64 Query: 60 EPGL 63 EP L Sbjct: 65 EPTL 68 >gi|313112714|ref|ZP_07798363.1| ferredoxin [Faecalibacterium cf. prausnitzii KLE1255] gi|310624970|gb|EFQ08276.1| ferredoxin [Faecalibacterium cf. prausnitzii KLE1255] Length = 55 Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV + +++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCGA--CEGACPVGAITV-DGVASVNADACIDCGACEGACPTGAITAE 55 >gi|307594911|ref|YP_003901228.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Vulcanisaeta distributa DSM 14429] gi|307550112|gb|ADN50177.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Vulcanisaeta distributa DSM 14429] Length = 616 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV + C C + CP E I P+ C+ C VC CP +AIKP E Sbjct: 549 YVDLDACKACGICYNLIACPAIVPLENRKAW-IDPNMCVGCSVCAQVCPYNAIKP--EGN 605 Query: 63 LELWLK 68 ++ WLK Sbjct: 606 VKDWLK 611 >gi|302528270|ref|ZP_07280612.1| formate dehydrogenase, beta subunit [Streptomyces sp. AA4] gi|302437165|gb|EFL08981.1| formate dehydrogenase, beta subunit [Streptomyces sp. AA4] Length = 276 Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C P CP I+ Sbjct: 96 SDVCKHCTHAACLDVCPTGALFRTEFDTVVVQQDICNGCGYCVPACPYGVIE 147 >gi|48477969|ref|YP_023675.1| ferredoxin [Picrophilus torridus DSM 9790] gi|48430617|gb|AAT43482.1| ferredoxin [Picrophilus torridus DSM 9790] Length = 70 Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 CV +CP D + E + I+ ++CI CG C CP AI + G +L Sbjct: 22 CVGMCPTDAIFMDETVIDINEEKCIKCGFCVVGCPTGAITAEWFHGSKL 70 >gi|48675343|dbj|BAD22819.1| ferredoxin2 [Heliobacillus mobilis] Length = 54 Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CV C + E I D+C+DCGVC+ CPVDAIK Sbjct: 15 CVSGCYTNAIVEANGKYTI-TDDCVDCGVCQDSCPVDAIKA 54 >gi|302339991|ref|YP_003805197.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637176|gb|ADK82603.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 292 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKPDTEPGLEL 65 CI CK C+ CPVD F + + +H D CI C C CP AI+ P +E+ Sbjct: 215 KCIKCK--KCISACPVDMFTYADGEIVMHRDNSSCILCAECFHTCPAGAIE---HPYIEM 269 Query: 66 WLK-INSEYA 74 K +N +A Sbjct: 270 GRKRLNDGFA 279 >gi|317050799|ref|YP_004111915.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfurispirillum indicum S5] gi|316945883|gb|ADU65359.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurispirillum indicum S5] Length = 176 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 24/104 (23%) Query: 3 YVVTENCILCKHTDCVEVCPVDC----FYEGENFL-------------AIHPDECIDCGV 45 Y + E CI C CV+ CP+D F+ + + + ECI CG+ Sbjct: 68 YFIEEKCIACNM--CVKACPIDVIQLEFHREDREVDGKVKKVPVIDKYTVDIGECISCGL 125 Query: 46 CEPECPVDAIKPDTEPGL-----ELWLKINSEYATQWPNITTKK 84 C CP DA+ E EL++ E A +P KK Sbjct: 126 CAEHCPTDAVFQSQEYETAYYYKELFVMNKDELAMTFPEYIEKK 169 >gi|260576503|ref|ZP_05844492.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259021226|gb|EEW24533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 245 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ + + ++ CI CG+C CP A + D G+ Sbjct: 80 RSCLHCQDAPCVPVCPTGASYKRAEDGIVLVNAAACIGCGLCAWACPYGARELDAAAGV 138 >gi|226327317|ref|ZP_03802835.1| hypothetical protein PROPEN_01184 [Proteus penneri ATCC 35198] gi|225204535|gb|EEG86889.1| hypothetical protein PROPEN_01184 [Proteus penneri ATCC 35198] Length = 188 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+H + C VCPV+ +N + ++ CI C +C CP AI P Sbjct: 31 MLCRHCEDAPCARVCPVNAITHEDNMIFLNESLCIGCKLCGLVCPFGAITP 81 >gi|206890889|ref|YP_002248948.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742827|gb|ACI21884.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 187 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E C+ C T C +VCP C Y G L I CI CG CE CPV+AI Sbjct: 59 ERCVAC--TKCAQVCPSQCIYIDYSINPETGARVLTKYEIDALRCIFCGYCEEVCPVNAI 116 >gi|313681563|ref|YP_004059301.1| 4fe-4S ferredoxin [Sulfuricurvum kujiense DSM 16994] gi|313154423|gb|ADR33101.1| 4Fe-4S ferredoxin [Sulfuricurvum kujiense DSM 16994] Length = 84 Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ + CI C C E CP+D EG+ I PD C +C C CPVD Sbjct: 1 MPLLIVDECIACDA--CREECPMDAIEEGDPIYIIDPDRCTECVGTYDEPACIAVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDKD 64 >gi|262406391|ref|ZP_06082940.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. 2_1_22] gi|262355094|gb|EEZ04185.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. 2_1_22] Length = 401 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 11/64 (17%) Query: 11 LCKHTDC------VEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+H +C V VC + + E+ + ++ D CIDCG+C+ CP + + Sbjct: 4 ICQHNECTGCSACVNVCGKNAIFYCEDKIGFRYPVVNLDLCIDCGLCQKVCPNNVEVDKS 63 Query: 60 EPGL 63 EP L Sbjct: 64 EPTL 67 >gi|330859342|emb|CBX69688.1| formate hydrogenlyase subunit 2 [Yersinia enterocolitica W22703] Length = 257 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ILC+H + C VCPV+ N + + CI C +C CP AI P Sbjct: 93 ILCRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 143 >gi|302548559|ref|ZP_07300901.1| 4Fe-4S ferredoxin, iron-sulfur binding [Streptomyces hygroscopicus ATCC 53653] gi|302466177|gb|EFL29270.1| 4Fe-4S ferredoxin, iron-sulfur binding [Streptomyces himastatinicus ATCC 53653] Length = 138 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDA--IK 56 + V E CI C CV+VCP + F G + + + ++C C CE CPVDA + Sbjct: 18 IELVSAERCIACDK--CVKVCPTNVFDRGPDGVPLLSRQEDCQTCFQCEANCPVDALFVA 75 Query: 57 PDTEP 61 P T P Sbjct: 76 PVTHP 80 >gi|229829818|ref|ZP_04455887.1| hypothetical protein GCWU000342_01916 [Shuttleworthia satelles DSM 14600] gi|229791807|gb|EEP27921.1| hypothetical protein GCWU000342_01916 [Shuttleworthia satelles DSM 14600] Length = 219 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C C VCP +C I + C+ CG C CPV A++ Sbjct: 166 YFITDACIGCG--SCAAVCPQNCIVTDSIPYIIEQEHCLHCGNCLTACPVGAVE 217 >gi|145628000|ref|ZP_01783801.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.1-21] gi|145630136|ref|ZP_01785918.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|145634201|ref|ZP_01789912.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittAA] gi|145636509|ref|ZP_01792177.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittHH] gi|145638142|ref|ZP_01793752.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittII] gi|260581897|ref|ZP_05849693.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|319776718|ref|YP_004139206.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3047] gi|319897467|ref|YP_004135664.1| oxidoreductase, fe-s subunit [Haemophilus influenzae F3031] gi|329123894|ref|ZP_08252448.1| anaerobic dimethyl sulfoxide reductase subunit B [Haemophilus aegyptius ATCC 11116] gi|144979775|gb|EDJ89434.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.1-21] gi|144984417|gb|EDJ91840.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|145268645|gb|EDK08638.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittAA] gi|145270334|gb|EDK10269.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittHH] gi|145272471|gb|EDK12378.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittII] gi|260095090|gb|EEW78982.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|309751304|gb|ADO81288.1| Anaerobic dimethyl sulfoxide reductase, subunit B [Haemophilus influenzae R2866] gi|309973477|gb|ADO96678.1| Anaerobic dimethyl sulfoxide reductase, subunit B [Haemophilus influenzae R2846] gi|317432973|emb|CBY81342.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3031] gi|317451309|emb|CBY87547.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3047] gi|327468501|gb|EGF13982.1| anaerobic dimethyl sulfoxide reductase subunit B [Haemophilus aegyptius ATCC 11116] Length = 205 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|332702842|ref|ZP_08422930.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio africanus str. Walvis Bay] gi|332552991|gb|EGJ50035.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio africanus str. Walvis Bay] Length = 698 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Query: 17 CVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECP 51 CV+VCP D + G +N ++P EC CG C CP Sbjct: 144 CVKVCPFDAIHMGPDNLPHVNPAECRACGKCVAVCP 179 >gi|310779216|ref|YP_003967549.1| hydrogenase large subunit domain protein [Ilyobacter polytropus DSM 2926] gi|309748539|gb|ADO83201.1| hydrogenase large subunit domain protein [Ilyobacter polytropus DSM 2926] Length = 480 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y T+ C C +C VCP D + I P++CI CG+C C AI Sbjct: 119 YYATDLCRNCIAHNCTNVCPRDAIVFDDGRAKIIPEKCIGCGLCAKSCDYYAI 171 >gi|300703372|ref|YP_003744974.1| 4fe-4S ferredoxin [Ralstonia solanacearum CFBP2957] gi|299071035|emb|CBJ42344.1| putative 4Fe-4S ferredoxin [Ralstonia solanacearum CFBP2957] Length = 719 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + + L++ C+ CG+CE CP DAI Sbjct: 591 CTLC--MACVSACPSQALRDQAEQPVLSMIERNCVQCGLCETTCPEDAI 637 >gi|257486634|ref|ZP_05640675.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|163794803|ref|ZP_02188773.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159180076|gb|EDP64601.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 676 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 11/80 (13%) Query: 5 VTENCILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V N LC H T C+++CP + +++ P C CG+C CP AI Sbjct: 269 VNVNDSLCAHSRNRKTGCTRCLDLCPASAIAPAGDVVSVDPALCGGCGLCAGTCPTSAIT 328 Query: 57 ---PDTEPGLELWLKINSEY 73 PD + + + + S Y Sbjct: 329 YAYPDVQSVHQRIMALASAY 348 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V TE C LC CV CP + + L D C+ CG+C CP I Sbjct: 517 VDTEGCTLC--LACVSACPASALQDNPDKPQLLFQEDACVQCGLCAATCPEKVI 568 >gi|78044791|ref|YP_360645.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] gi|77996906|gb|ABB15805.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] Length = 187 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 22/48 (45%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP Y+ + F+ I+ CI C VC CP AI Sbjct: 63 QCRQCEDAPCAHACPTGAIYQEDKFVRINEGNCIGCKVCTMVCPFGAI 110 >gi|327401016|ref|YP_004341855.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Archaeoglobus veneficus SNP6] gi|327316524|gb|AEA47140.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Archaeoglobus veneficus SNP6] Length = 621 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + VT++C LC CP G+ I CI CGVC CP AIKP Sbjct: 567 FTVTDDCNLCMKCVTEFACPALYVINGKP--VIDAALCIACGVCSRICPEKAIKP 619 >gi|227113131|ref|ZP_03826787.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 626 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTSP 108 >gi|209527856|ref|ZP_03276346.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrospira maxima CS-328] gi|209491713|gb|EDZ92078.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrospira maxima CS-328] Length = 75 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV CPV C + +G ++ I D CIDCG+C CPV+ AI + P L+ Sbjct: 14 ADCVGACPVACIHPGPGKNTKGTDWYWIDFDTCIDCGICLQVCPVEGAIVAEERPELQ 71 >gi|150391494|ref|YP_001321543.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149951356|gb|ABR49884.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 157 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C C+ C+++CP + + + I+ D+C CG+CE CP I Sbjct: 65 HCRHCQEAFCLQLCPTKAITQEKKVVVINDDKCTGCGICEQGCPYGVI 112 >gi|326383779|ref|ZP_08205464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197543|gb|EGD54732.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 460 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 15/25 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKP 57 L I P C+DCG C CPV AI P Sbjct: 2 LYIDPSTCVDCGACVSACPVGAIVP 26 >gi|296119426|ref|ZP_06837984.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Corynebacterium ammoniagenes DSM 20306] gi|295967309|gb|EFG80576.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Corynebacterium ammoniagenes DSM 20306] Length = 358 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + C++VCP + E + + D C CG C CP I+ + G+ L Sbjct: 131 CKHCTNAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERREDGGVS--L 188 Query: 68 KINSEYATQWPN 79 K N A + P+ Sbjct: 189 KANHVEAQEVPD 200 >gi|188577211|ref|YP_001914140.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521663|gb|ACD59608.1| ferredoxin II [Xanthomonas oryzae pv. oryzae PXO99A] Length = 142 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C+ CPVD G + + C C +C P CPVD I+ Sbjct: 83 VAWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 137 >gi|16272978|ref|NP_439205.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae Rd KW20] gi|145632412|ref|ZP_01788147.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 3655] gi|229843915|ref|ZP_04464056.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 6P18H1] gi|260580135|ref|ZP_05847965.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|1169361|sp|P45003|DMSB_HAEIN RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|1574080|gb|AAC22705.1| anaerobic dimethyl sulfoxide reductase, chain B (dmsB) [Haemophilus influenzae Rd KW20] gi|144987319|gb|EDJ93849.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 3655] gi|229812909|gb|EEP48597.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 6P18H1] gi|260093419|gb|EEW77352.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|301169793|emb|CBW29394.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae 10810] Length = 205 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|325968088|ref|YP_004244280.1| Fe-S-cluster-containing hydrogenase components 1 [Vulcanisaeta moutnovskia 768-28] gi|323707291|gb|ADY00778.1| Fe-S-cluster-containing hydrogenase components 1 [Vulcanisaeta moutnovskia 768-28] Length = 263 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C CK+ CV VCP Y+ + + I+ + CI C CE CP I D Sbjct: 70 TFSVPISCFQCKNPACVTVCPTGAIYKRREDGVVVINYEVCIGCRYCENACPYGNIIFDP 129 Query: 60 EPGLE 64 G+ Sbjct: 130 VEGVS 134 >gi|313894091|ref|ZP_07827657.1| putative ferredoxin [Veillonella sp. oral taxon 158 str. F0412] gi|313441655|gb|EFR60081.1| putative ferredoxin [Veillonella sp. oral taxon 158 str. F0412] Length = 75 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG I CI CG C CPV A+K Sbjct: 4 LKFTIDDTCVKCGA--CAEDCPVQCITEGMTRFNIGTG-CIGCGDCYSICPVGAVK 56 >gi|257439152|ref|ZP_05614907.1| Fe-hydrogenase large subunit family protein [Faecalibacterium prausnitzii A2-165] gi|257198403|gb|EEU96687.1| Fe-hydrogenase large subunit family protein [Faecalibacterium prausnitzii A2-165] Length = 528 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I ++CI CG C CP +AI P Sbjct: 132 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQEKCIKCGRCATVCPYNAIVKTERP 188 >gi|256544643|ref|ZP_05472015.1| periplasmic [Fe] hydrogenase 1 [Anaerococcus vaginalis ATCC 51170] gi|256399532|gb|EEU13137.1| periplasmic [Fe] hydrogenase 1 [Anaerococcus vaginalis ATCC 51170] Length = 489 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C CV VCP + I D+CI CG C CP +AI P Sbjct: 102 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVEACPYNAIAHTKRP 158 >gi|227111751|ref|ZP_03825407.1| nitrite reductase complex component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 223 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C H CV+VCP Y + ++PD C+ C C CP V I P T+ Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDAASGIVDVNPDLCVGCQYCLAACPYQVRFIHPQTK 147 >gi|161502318|ref|YP_001569430.1| putative polyferredoxin [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863665|gb|ABX20288.1| hypothetical protein SARI_00350 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 287 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 25/111 (22%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + +I CI CG C CPVDA IKP DT G Sbjct: 29 CADVCPAQAFLLTQGQASIDMARCIACGDCLFVCPVDAITGIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 L LW +S+Y ++ +I ++ + A + G+ +Y P Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSAQWLMA-LAGLNLALRRYGEP 135 >gi|150402671|ref|YP_001329965.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033701|gb|ABR65814.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 167 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C+EVCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAI 90 >gi|68249608|ref|YP_248720.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 86-028NP] gi|68057807|gb|AAX88060.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 86-028NP] Length = 205 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|257064390|ref|YP_003144062.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792043|gb|ACV22713.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 450 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP---VDAIKPDTE 60 C VC + E + + PD+CI CG C CP ++A+ P E Sbjct: 32 CASVCTTGAISKSEAGVTVDPDKCIGCGTCATACPSCCLEAMNPSDE 78 >gi|254509887|ref|ZP_05121954.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533598|gb|EEE36586.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 631 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 8/59 (13%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LC H ++C+++CP + +AI P C CG C CP AI + P Sbjct: 248 LCAHARAGQTGCSNCLDICPTGAITPAGDHVAIDPMICAGCGECSALCPSTAITYEDPP 306 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 +C LC CV +CP + + L D C+ CG+C CP AI+ Sbjct: 482 SCTLC--LSCVSLCPSGALIDNPDKPQLNFQQDACLQCGICRTICPEQAIE 530 >gi|168182073|ref|ZP_02616737.1| [Fe] hydrogenase [Clostridium botulinum Bf] gi|182674775|gb|EDT86736.1| [Fe] hydrogenase [Clostridium botulinum Bf] Length = 497 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|310827326|ref|YP_003959683.1| hypothetical protein ELI_1734 [Eubacterium limosum KIST612] gi|308739060|gb|ADO36720.1| hypothetical protein ELI_1734 [Eubacterium limosum KIST612] Length = 223 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C E+C D EGE + I+ + C +CG C CPV+AI Sbjct: 172 ITDACISC--GKCTELCYFDAVEEGEPY-KINGNRCDECGNCYHHCPVNAI 219 >gi|296533711|ref|ZP_06896262.1| 4Fe-4S ferredoxin [Roseomonas cervicalis ATCC 49957] gi|296265958|gb|EFH12032.1| 4Fe-4S ferredoxin [Roseomonas cervicalis ATCC 49957] Length = 666 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LC H T C+++CP G+ + I + C CG C CP A + D P Sbjct: 273 LCAHARNKRTGCTRCLDLCPTGAITPGKESVQISAEICAGCGACAAICPTGAAQYDLPP 331 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC C VCP F + L+ D C+ CG+C CP I Sbjct: 513 VAVEGCTLC--LACTMVCPTGAFAANPDRPELSFLEDACVQCGLCATTCPEKVIS----- 565 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 L L + E AT+ + PS +K G + ++ Sbjct: 566 -LTPRLNLAPEAATRRVVKQEEPAICPSCSKAFGTRASIDR 605 >gi|270308716|ref|YP_003330774.1| reductive dehalogenase [Dehalococcoides sp. VS] gi|270154608|gb|ACZ62446.1| reductive dehalogenase [Dehalococcoides sp. VS] Length = 429 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 40 CIDCGVCEPECPVDAIKPDTEPGLELW 66 CI CG+C CPV AI + EP ++W Sbjct: 346 CIKCGICANICPVSAINSNPEPSWDIW 372 >gi|145640720|ref|ZP_01796303.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|148828211|ref|YP_001292964.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittGG] gi|145274646|gb|EDK14509.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.4-21] gi|148719453|gb|ABR00581.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittGG] Length = 205 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|158321164|ref|YP_001513671.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141363|gb|ABW19675.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 362 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 4 VVTENCIL-CKHTD----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C+L C D C ++CP D +++ + CI CG+C+ CP AI+ Sbjct: 18 ILQERCLLNCSSMDPCTKCRDICPKDAMLLNSGKISMDENLCIGCGLCKAVCPTQAIQ 75 >gi|104780426|ref|YP_606924.1| lectron transport complex protein RnfB [Pseudomonas entomophila L48] gi|95109413|emb|CAK14113.1| putative lectron transport complex protein RnfB [Pseudomonas entomophila L48] Length = 254 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + EC C +C P CPVD I Sbjct: 81 CIGC--TKCIQACPVDAIVGASKLMHTVIAIECTGCDLCLPACPVDCI 126 >gi|255319168|ref|ZP_05360386.1| electron transport complex, rnfaBcdge type, b subunit [Acinetobacter radioresistens SK82] gi|262379300|ref|ZP_06072456.1| NADH:ubiquinone oxidoreductase [Acinetobacter radioresistens SH164] gi|255303814|gb|EET83013.1| electron transport complex, rnfaBcdge type, b subunit [Acinetobacter radioresistens SK82] gi|262298757|gb|EEY86670.1| NADH:ubiquinone oxidoreductase [Acinetobacter radioresistens SH164] Length = 266 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ E+ CI C T C+ CPVD G+ + D C C +C P CPVD I Sbjct: 83 MKAVIREDECIGC--TKCISACPVDAIIGSGKLMHTVLTDLCTGCELCIPPCPVDCI 137 >gi|192289827|ref|YP_001990432.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192283576|gb|ACE99956.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 607 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+T C C+ C+ + CP D ++EG + + I P CI C +C C +D IK Sbjct: 544 VITSQCTACQ--SCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIA 601 Query: 59 T 59 T Sbjct: 602 T 602 >gi|67906754|gb|AAY82817.1| predicted iron-sulfur cluster-binding protein [uncultured bacterium MedeBAC46A06] Length = 672 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 T+NC +C CV CP + + L D C+ CG+C CP I Sbjct: 527 TDNCTIC--LSCVSACPAGALQDNPDAPQLLFREDACLQCGICMATCPEKVI 576 >gi|6644291|gb|AAF20994.1|AF208000_2 ferrodoxin [Pseudomonas syringae pv. syringae] Length = 38 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 22/28 (78%) Query: 68 KINSEYATQWPNITTKKESLPSAAKMDG 95 ++N+E A WPNIT KK+++P AA+ DG Sbjct: 1 ELNAELAEIWPNITEKKDAMPDAAEWDG 28 >gi|152965569|ref|YP_001361353.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] gi|151360086|gb|ABS03089.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] Length = 376 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C C H C++VCP + E + + D C CG C CP I Sbjct: 200 CKHCTHAACLDVCPTGALFRTEFGTVVVQQDVCNGCGYCVSACPYGVI 247 >gi|224535649|ref|ZP_03676188.1| hypothetical protein BACCELL_00513 [Bacteroides cellulosilyticus DSM 14838] gi|224522722|gb|EEF91827.1| hypothetical protein BACCELL_00513 [Bacteroides cellulosilyticus DSM 14838] Length = 486 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I DECI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDECISCGICHKSCPYHAI 169 >gi|171914161|ref|ZP_02929631.1| putative anaerobic reductase component [Verrucomicrobium spinosum DSM 4136] Length = 534 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C E CPV + + E + D+CI C C +CP D K + + G Sbjct: 108 VTTACHHCTDPACAEGCPVLAYEKDEETGIVRHLDDQCIGCSYCILKCPYDVPKYNPKRG 167 Query: 63 L 63 + Sbjct: 168 I 168 >gi|251799425|ref|YP_003014156.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. JDR-2] gi|247547051|gb|ACT04070.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. JDR-2] Length = 129 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 + V E CI C + CV+VCP + F +GE+ + + +C C +CE CP DA+ Sbjct: 2 IELVSEERCISC--SICVKVCPTNVFDKGEDGIPVIARQSDCQTCFICEVYCPADAL 56 >gi|84623478|ref|YP_450850.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367418|dbj|BAE68576.1| ferredoxin II [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 142 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C+ CPVD G + + C C +C P CPVD I+ Sbjct: 83 VAWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 137 >gi|83746719|ref|ZP_00943768.1| Formate hydrogenlyase subunit 6 [Ralstonia solanacearum UW551] gi|83726672|gb|EAP73801.1| Formate hydrogenlyase subunit 6 [Ralstonia solanacearum UW551] Length = 719 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + + L++ C+ CG+CE CP DAI Sbjct: 591 CTLC--MACVSACPSQALRDQAEQPVLSMIERNCVQCGLCETTCPEDAI 637 >gi|269217312|ref|ZP_06161166.1| iron-sulfur cluster-binding protein [Slackia exigua ATCC 700122] gi|269129449|gb|EEZ60534.1| iron-sulfur cluster-binding protein [Slackia exigua ATCC 700122] Length = 259 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPG 62 E+C CK C+ CPV Y A + D CI CG+C CP + + D G Sbjct: 153 TVEHCKQCKEAACMRNCPVHAIYADPKTGARVVDTDACIGCGLCHEACPWNMPQIDPASG 212 Query: 63 LELWLKINSEYATQWPNITTK 83 A Q PN K Sbjct: 213 KSTKCIACGRCAVQCPNGAIK 233 >gi|239927159|ref|ZP_04684112.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces ghanaensis ATCC 14672] Length = 235 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 + ++ C C H C++VCP + E + + D C CG C P CP I +PD Sbjct: 143 MSSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDQRPD 200 >gi|254500510|ref|ZP_05112661.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222436581|gb|EEE43260.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 245 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CV VCP Y+ + + ++ D CI CG+C CP A + D G+ Sbjct: 77 KSCLHCDDAPCVTVCPTGASYKRREDGIVLVNEDACIGCGLCAWACPYGARELDQAEGV 135 >gi|197120163|ref|YP_002140590.1| iron-sulfur cluster-binding sigma-54-dependent transcriptional regulator, FehydlgC/FeS domain-containing protein [Geobacter bemidjiensis Bem] gi|197089523|gb|ACH40794.1| iron-sulfur cluster-binding sigma-54-dependent transcriptional regulator, FehydlgC and FeS domain-containing protein [Geobacter bemidjiensis Bem] Length = 759 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T++C C CV CPV +++ I + CI CG C CP A Sbjct: 7 ITDHCRKC--YSCVRSCPVKAIKVEKSYTEIIAERCIGCGNCMSHCPQHA 54 >gi|322831881|ref|YP_004211908.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rahnella sp. Y9602] gi|321167082|gb|ADW72781.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rahnella sp. Y9602] Length = 209 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 31/71 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ N + ++ C+ C +C CP AI L++ + Sbjct: 57 CHQCEDAPCAQVCPVNAITRENNAIHLNESLCVSCKLCGLACPFGAITFSGSTPLDMPVD 116 Query: 69 INSEYATQWPN 79 N+ A P Sbjct: 117 CNTSKALPAPR 127 >gi|221194389|ref|ZP_03567446.1| hydrogenase large subunit domain protein [Atopobium rimae ATCC 49626] gi|221185293|gb|EEE17683.1| hydrogenase large subunit domain protein [Atopobium rimae ATCC 49626] Length = 532 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + V+ C C C E+CP + I ++CI CG+CE CP AI P Sbjct: 123 FRVSNACQGCLAHPCREICPKGAISFVDKKAFIDQEKCIKCGMCEKVCPYHAILHHLRPC 182 Query: 63 LE 64 E Sbjct: 183 AE 184 >gi|170756783|ref|YP_001782925.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] gi|169121995|gb|ACA45831.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] Length = 497 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|134045120|ref|YP_001096606.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662745|gb|ABO34391.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 167 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C+EVCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAI 90 >gi|288561161|ref|YP_003424647.1| methyl viologen-reducing hydrogenase beta subunit MvhB [Methanobrevibacter ruminantium M1] gi|288543871|gb|ADC47755.1| methyl viologen-reducing hydrogenase beta subunit MvhB [Methanobrevibacter ruminantium M1] Length = 410 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CI C CV+ CP D + P+ C CG+C CPVDAI D E G Sbjct: 211 ADACIGCNS--CVDACPGDFISPKSDLTVALPEACAACGLCVNVCPVDAIDLDVEYGAS- 267 Query: 66 WLKINSEYATQW 77 K +S W Sbjct: 268 --KFDSTEGICW 277 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 16/59 (27%) Query: 9 CILCKHTDCVEVCPVDCF------------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C++C+ CV++CPVD E E A++ D+C CGVC ECPVDAI Sbjct: 104 CVMCQK--CVDICPVDVIGVPGIKEPASRVIEPEG--AVYIDDCKGCGVCVAECPVDAI 158 >gi|229846080|ref|ZP_04466192.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 7P49H1] gi|229811084|gb|EEP46801.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 7P49H1] Length = 205 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|74316589|ref|YP_314329.1| DMSO reductase subunit B [Thiobacillus denitrificans ATCC 25259] gi|74056084|gb|AAZ96524.1| DMSO reductase chain B [Thiobacillus denitrificans ATCC 25259] Length = 231 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ DCV VCP Y+ + + I D+C+ C C CP A + D G Sbjct: 71 SCMHCEDADCVTVCPTGASYKRAEDGIVLIDQDKCMGCNYCSWACPYGARELDRSSG 127 >gi|15603620|ref|NP_246694.1| DmsB [Pasteurella multocida subsp. multocida str. Pm70] gi|12722171|gb|AAK03839.1| DmsB [Pasteurella multocida subsp. multocida str. Pm70] Length = 206 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + CV VCP ++ E+ F+ ++ CI C C CP DA + D Sbjct: 60 FAYYLSISCNHCDNPACVSVCPTGAMHKTEDGFVIVNEAICIGCRYCHMACPYDAPQYDA 119 Query: 60 EPG 62 G Sbjct: 120 MKG 122 >gi|51246231|ref|YP_066115.1| hydrogenase [Desulfotalea psychrophila LSv54] gi|50877268|emb|CAG37108.1| related to hydrogenase [Desulfotalea psychrophila LSv54] Length = 483 Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C++ CP D + I + CI+CG C CP AI Sbjct: 113 YEVTNACQGCLAQACIQSCPKDAITMVQGKSHIDSNLCINCGKCLKVCPYHAI 165 >gi|304312861|ref|YP_003812459.1| hypothetical protein HDN1F_32410 [gamma proteobacterium HdN1] gi|301798594|emb|CBL46824.1| Hypothetical protein HDN1F_32410 [gamma proteobacterium HdN1] Length = 296 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + + + CI C T C++ CPVD + + D+C C +C CPVD I Sbjct: 85 LAVIREDECIGC--TKCIQACPVDAILGAAQLMHTVIGDQCTGCNLCVEPCPVDCIDMVA 142 Query: 60 EPGLEL 65 P L + Sbjct: 143 MPELPM 148 >gi|298530425|ref|ZP_07017827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509799|gb|EFI33703.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 99 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 16 DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 CV+VCP F GE + + P C++CG C CP AIK PG+ I + + Sbjct: 25 SCVQVCPHRVFDVGEQKAVLLDPGGCMECGACALNCPAGAIK--VRPGVGCAQAILNSWL 82 Query: 75 TQWPNI 80 P + Sbjct: 83 AGMPVL 88 >gi|254452377|ref|ZP_05065814.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 238] gi|198266783|gb|EDY91053.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 238] Length = 268 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D E Sbjct: 85 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMDAE 140 >gi|194289253|ref|YP_002005160.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193223088|emb|CAQ69093.1| FERREDOXIN [4FE-4S] PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 273 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + PD C C +C P CPVD I Sbjct: 88 CIGC--TLCIQACPVDAIAGAAKQMHTVIPDLCTGCDLCVPPCPVDCI 133 >gi|189467136|ref|ZP_03015921.1| hypothetical protein BACINT_03520 [Bacteroides intestinalis DSM 17393] gi|189435400|gb|EDV04385.1| hypothetical protein BACINT_03520 [Bacteroides intestinalis DSM 17393] Length = 486 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I DECI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDECISCGICHKSCPYHAI 169 >gi|148381245|ref|YP_001255786.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|148290729|emb|CAL84860.1| putative iron-dependent hydrogenase [Clostridium botulinum A str. ATCC 3502] Length = 498 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 105 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 163 >gi|146303119|ref|YP_001190435.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701369|gb|ABP94511.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 87 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C CV+VCP + + + +H + C++CG CP AI Sbjct: 22 VNLEVCRTCAEKPCVKVCPAGTYERSGDVIEVHYERCLECGAALVACPFGAI 73 >gi|11498785|ref|NP_070014.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649398|gb|AAB90058.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 131 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C CV +CP + Y G+ +AI+ ++C+ CG C CP A+ Sbjct: 80 EKCVHCGA--CVSICPTEAIYINGDKRVAINTEKCVHCGSCVKVCPTRAL 127 >gi|302389112|ref|YP_003824933.1| NADH dehydrogenase (quinone) [Thermosediminibacter oceani DSM 16646] gi|302199740|gb|ADL07310.1| NADH dehydrogenase (quinone) [Thermosediminibacter oceani DSM 16646] Length = 625 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 8 NCILCKH-TDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +CK + C VCPV E + I+PD+CI CG C CP A+K Sbjct: 572 DATVCKGCSKCSRVCPVGAISGEIKKPFTINPDKCIKCGACVEACPFKAVK 622 >gi|237796742|ref|YP_002864294.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] gi|229262438|gb|ACQ53471.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] Length = 497 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|193077843|gb|ABO12720.2| putative 4Fe-4S ferredoxin [Acinetobacter baumannii ATCC 17978] Length = 87 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCDM--CLPECPNTAIFEGSKVYQIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IKPD Sbjct: 59 IKPD 62 >gi|126460737|ref|YP_001057015.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250458|gb|ABO09549.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 96 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLELWL 67 C C+ C +CP C+ + + + + + C++CG C CP I+ + G+ +W Sbjct: 34 CRKCEKKPCTYMCPAKCYVQQGDIIVLSTEACVECGTCRVVCPHGNIEWNYPRSGMGIWY 93 Query: 68 KIN 70 + Sbjct: 94 RFT 96 >gi|126175973|ref|YP_001052122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999178|gb|ABN63253.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 188 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ ++IH ++C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPYKVRFMNPETK 114 >gi|262376638|ref|ZP_06069866.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308348|gb|EEY89483.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 87 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +T+ CI C C VCP + Y GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCD--VCEPVCPNEAIYMGELIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKKES 86 I D ++ + ++ +T +K S Sbjct: 59 IPLDPN-----HVETQEQLQAKYEKLTAQKTS 85 >gi|224540171|ref|ZP_03680710.1| hypothetical protein BACCELL_05084 [Bacteroides cellulosilyticus DSM 14838] gi|224518205|gb|EEF87310.1| hypothetical protein BACCELL_05084 [Bacteroides cellulosilyticus DSM 14838] Length = 600 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPV 52 +T+ + C C +VC D EG + + D+C DCG+CE CP+ Sbjct: 4 ITDKAMCCGCNACGDVCAHDAITFRTDIEGFWYPEVDKDKCTDCGLCERVCPI 56 >gi|222053655|ref|YP_002536017.1| Fis family transcriptional regulator [Geobacter sp. FRC-32] gi|221562944|gb|ACM18916.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. FRC-32] Length = 754 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +TE C C CV CPV + F I + CI CG C CP A Sbjct: 7 LTEKCRKC--YSCVRSCPVKAIKVEKTFTEIIFERCIGCGNCLSNCPQHA 54 >gi|254427723|ref|ZP_05041430.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Alcanivorax sp. DG881] gi|196193892|gb|EDX88851.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Alcanivorax sp. DG881] Length = 194 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 108 VAYIREDECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVEPCPVDCI 161 >gi|168179051|ref|ZP_02613715.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] gi|182670135|gb|EDT82111.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] Length = 497 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|315187127|gb|EFU20884.1| hydrogenase large subunit domain protein [Spirochaeta thermophila DSM 6578] Length = 527 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VTE C C C CP +I + CI+CG+CE CP AI Sbjct: 158 FMVTEVCQGCVARPCKTGCPKGAISIVRGRASIDYERCINCGLCERVCPFHAI 210 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 8 NCILCKHT-----------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 NC LC+ C EVCPV +GE+ +A I CI CG C CP A Sbjct: 197 NCGLCERVCPFHAIVRIPVPCEEVCPVGAIEKGEDGVARIDRGACILCGKCLKACPFGA 255 >gi|197286794|ref|YP_002152666.1| anaerobic reductase component B [Proteus mirabilis HI4320] gi|227355015|ref|ZP_03839426.1| anaerobic reductase component B [Proteus mirabilis ATCC 29906] gi|194684281|emb|CAR45833.1| putative anaerobic reductase component B [Proteus mirabilis HI4320] gi|227164802|gb|EEI49649.1| anaerobic reductase component B [Proteus mirabilis ATCC 29906] Length = 213 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C CV+ CP + EG+ + + D+C+ CG C CP A + D Sbjct: 70 FAYTLSISCNHCDDPICVKNCPTTAMHKREGDGIVMVDTDKCVGCGACAWSCPYGAPQMD 129 Query: 59 TE 60 E Sbjct: 130 PE 131 >gi|319794270|ref|YP_004155910.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315596733|gb|ADU37799.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 692 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 E C LC CV CP + + L C+ CG+CE CP DA+ Sbjct: 561 EKCTLC--LACVSACPSGALLDSQTAPQLRFIEKNCVQCGLCEITCPEDAV 609 >gi|301062599|ref|ZP_07203231.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300443279|gb|EFK07412.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 249 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDA 54 NC+ C+ CVE CP Y+ + + I CI CG C P CP A Sbjct: 60 NCMQCEKPTCVEACPTGATYKDPLDGTVRIDRRLCIGCGQCLPACPYGA 108 >gi|289191512|ref|YP_003457453.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus sp. FS406-22] gi|288937962|gb|ADC68717.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus sp. FS406-22] Length = 238 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +N C LC C+ VCP + ++F+ I +C+ CG C+ CP +AI E Sbjct: 144 YAIDKNKCKLC--LKCINVCPNGAIAKRDDFVEISLPKCLGCGNCKKVCPYNAIIEGKEI 201 Query: 62 GLELWLKINSE 72 + + KI++E Sbjct: 202 KMRVR-KIDAE 211 >gi|269216392|ref|ZP_06160246.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] gi|269130651|gb|EEZ61729.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] Length = 170 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 12 CKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+H D C+EVCPV + E+ + + D CI C C CP DA D + G+ Sbjct: 42 CQHCDTPSCIEVCPVGATSKREDGVVVVDKDICIGCASCVSACPYDARAIDADAGV 97 >gi|184157307|ref|YP_001845646.1| NADH:ubiquinone oxidoreductase subunit RnfB [Acinetobacter baumannii ACICU] gi|332873434|ref|ZP_08441387.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6014059] gi|183208901|gb|ACC56299.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter baumannii ACICU] gi|322507192|gb|ADX02646.1| RnfB [Acinetobacter baumannii 1656-2] gi|323517170|gb|ADX91551.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter baumannii TCDC-AB0715] gi|332738380|gb|EGJ69254.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6014059] Length = 263 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|158522522|ref|YP_001530392.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] gi|158511348|gb|ABW68315.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] Length = 672 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CV CP GEN L + ++C CG CE CP IK Sbjct: 149 CVRACPFGALTMGENGLPVVDREKCTGCGTCERVCPKHIIK 189 >gi|50084303|ref|YP_045813.1| putative iron-sulfur protein [Acinetobacter sp. ADP1] gi|49530279|emb|CAG67991.1| conserved hypothetical protein; putative iron-sulfur protein [Acinetobacter sp. ADP1] Length = 250 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK-- 56 M ++ E+ CI C T C+ CPVD G+ + D C C +C P CPVD I Sbjct: 69 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTVLTDLCTGCELCIPPCPVDCIDLV 126 Query: 57 PDTEP 61 D EP Sbjct: 127 EDREP 131 >gi|310778492|ref|YP_003966825.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] gi|309747815|gb|ADO82477.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] Length = 598 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + +T+ CI C T C +VCP + + I+ D CI CG C C +AIK Sbjct: 542 IQFTITDKCIGC--TACAKVCPTEAILGRVKEKHYIYQDRCIKCGACYNACRFNAIK 596 >gi|307689027|ref|ZP_07631473.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 436 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T++C C T C+ VC VD + + I D+CI CG C C DAI Sbjct: 380 VKYYITDDCKGC--TKCMNVCAVDAINGQVRSRHIIDADKCIRCGACRKICSFDAI 433 >gi|307718915|ref|YP_003874447.1| hypothetical protein STHERM_c12330 [Spirochaeta thermophila DSM 6192] gi|306532640|gb|ADN02174.1| hypothetical protein STHERM_c12330 [Spirochaeta thermophila DSM 6192] Length = 527 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VTE C C C CP +I + CI+CG+CE CP AI Sbjct: 158 FMVTEVCQGCVARPCKTGCPRGAISIVRGRASIDYERCINCGLCERVCPFHAI 210 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 8 NCILCKHT-----------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 NC LC+ C EVCPV +GE+ +A I CI CG C CP A Sbjct: 197 NCGLCERVCPFHAIVRIPVPCEEVCPVGAIEKGEDGVARIDRGACILCGKCLKACPFGA 255 >gi|290475910|ref|YP_003468805.1| NADH dehydrogenase I subunit I, 2Fe-2S ferredoxin-related [Xenorhabdus bovienii SS-2004] gi|289175238|emb|CBJ82041.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Xenorhabdus bovienii SS-2004] Length = 180 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|254503333|ref|ZP_05115484.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222439404|gb|EEE46083.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 652 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 9/75 (12%) Query: 11 LCKHTD--------CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H+ C+++CP + + I P C CG+C CP A+ D Sbjct: 271 LCAHSRAQKTGCNRCLDLCPTGAITPAGDHITIDPMVCAGCGMCSAACPSGAVSYDAPTP 330 Query: 63 LELWLKINSEYATQW 77 ++ +I + AT W Sbjct: 331 QHVFKRIET-LATTW 344 >gi|213612664|ref|ZP_03370490.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 119 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 24/91 (26%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA---IKP-------DTEPG---- 62 C +VCP F + ++I CI CG C CPVDA IKP DT G Sbjct: 29 CTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAITDIKPVKRFVQGDTLVGPFSL 88 Query: 63 -------LELWLKINSEYATQWPNITTKKES 86 L LW +S+Y ++ +I ++ + Sbjct: 89 QAPTVDELLLW---HSQYGIRFIDIAVERSA 116 >gi|205355049|ref|YP_002228850.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274830|emb|CAR39890.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 223 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 10/95 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP--DTE 60 +C C H CV+VCP + + ++PD C+ C C CP V I P T Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSKTA 149 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 + KIN + Q + ES P+ A M G Sbjct: 150 DKCDFCRKINLKAGKQPACV----ESCPTKALMFG 180 >gi|89896469|ref|YP_519956.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89335917|dbj|BAE85512.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 206 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI-----KPDTEPG 62 C C++ CV+VCPV Y+ E + I+ D CI C C CP +A +P +PG Sbjct: 66 CQHCENAACVKVCPVGATYKDELGRVVINYDRCIGCRFCMAACPYNARVFNWEEPVRDPG 125 Query: 63 L 63 Sbjct: 126 F 126 >gi|293608863|ref|ZP_06691166.1| electron transport complex [Acinetobacter sp. SH024] gi|292829436|gb|EFF87798.1| electron transport complex [Acinetobacter sp. SH024] Length = 263 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|302875429|ref|YP_003844062.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|302578286|gb|ADL52298.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 613 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y +T++C C T C+ VC VD + + I D+CI CG C C DAI Sbjct: 557 VKYYITDDCKGC--TKCMNVCAVDAINGQVRSRHIIDADKCIRCGACRKICSFDAI 610 >gi|226327475|ref|ZP_03802993.1| hypothetical protein PROPEN_01346 [Proteus penneri ATCC 35198] gi|225204001|gb|EEG86355.1| hypothetical protein PROPEN_01346 [Proteus penneri ATCC 35198] Length = 158 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDA--IK 56 Y ++ +C C CV+ CP ++ G+ + + D+C+ CG C CP A + Sbjct: 70 FAYTLSISCNHCDDPICVKNCPTTAMHKRKGDGIVMVDTDKCVGCGACAWSCPYGAPQMN 129 Query: 57 PDTEPG------LELWLKINSEYAT 75 P+T+ ++L K+N+ + + Sbjct: 130 PETKQMSKCDFCIDLQQKVNNRFVS 154 >gi|254439365|ref|ZP_05052859.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] gi|198254811|gb|EDY79125.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] Length = 242 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D E Sbjct: 58 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMDAE 113 >gi|147678456|ref|YP_001212671.1| hypothetical protein PTH_2121 [Pelotomaculum thermopropionicum SI] gi|146274553|dbj|BAF60302.1| Uncharacterized Fe-S center protein [Pelotomaculum thermopropionicum SI] Length = 367 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--TEPG 62 E C C+ C + CP + ++CI CG C CPV AI + TEPG Sbjct: 193 EKCTGCER--CSQWCPAQAIGVRGRVSVVDENKCIGCGECTVTCPVHAISVNWKTEPG 248 >gi|117625117|ref|YP_854105.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli APEC O1] gi|218559878|ref|YP_002392791.1| oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli S88] gi|227888433|ref|ZP_04006238.1| 4Fe-4S binding protein [Escherichia coli 83972] gi|300980322|ref|ZP_07174976.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|301049332|ref|ZP_07196302.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|306812213|ref|ZP_07446411.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli NC101] gi|115514241|gb|ABJ02316.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli APEC O1] gi|218366647|emb|CAR04401.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli S88] gi|227834702|gb|EEJ45168.1| 4Fe-4S binding protein [Escherichia coli 83972] gi|281179891|dbj|BAI56221.1| putative oxidoreductase [Escherichia coli SE15] gi|294493750|gb|ADE92506.1| 4Fe-4S binding protein [Escherichia coli IHE3034] gi|300298931|gb|EFJ55316.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|300409330|gb|EFJ92868.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|305854251|gb|EFM54689.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli NC101] gi|307554862|gb|ADN47637.1| putative electron transport protein YgfS [Escherichia coli ABU 83972] gi|307625542|gb|ADN69846.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli UM146] gi|315289453|gb|EFU48848.1| 4Fe-4S binding domain protein [Escherichia coli MS 110-3] gi|315293883|gb|EFU53235.1| 4Fe-4S binding domain protein [Escherichia coli MS 153-1] gi|323951676|gb|EGB47551.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323957394|gb|EGB53116.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] Length = 162 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ S NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASSENP 161 >gi|325676247|ref|ZP_08155926.1| formate dehydrogenase beta subunit [Rhodococcus equi ATCC 33707] gi|325552808|gb|EGD22491.1| formate dehydrogenase beta subunit [Rhodococcus equi ATCC 33707] Length = 315 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI----KPDTE 60 ++ C C H C++VCP + E + + D C CG C P CP I P + Sbjct: 126 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQNDICNGCGYCIPACPYGVIDRRDGPAGD 185 Query: 61 PGLELWLK 68 P + L K Sbjct: 186 PAVGLAQK 193 >gi|197286375|ref|YP_002152247.1| hydrogenase-4 component A [Proteus mirabilis HI4320] gi|227357429|ref|ZP_03841783.1| hydrogenase-4 component A [Proteus mirabilis ATCC 29906] gi|194683862|emb|CAR45000.1| hydrogenase-4 component A [Proteus mirabilis HI4320] gi|227162387|gb|EEI47387.1| hydrogenase-4 component A [Proteus mirabilis ATCC 29906] Length = 206 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+H + C VCPV+ +N + ++ CI C +C CP AI P Sbjct: 49 MLCRHCEDAPCASVCPVNAITHEDNMIFLNESLCIGCKLCGLVCPFGAITP 99 >gi|153938019|ref|YP_001392647.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|152933915|gb|ABS39413.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|295320632|gb|ADG01010.1| [Fe] hydrogenase [Clostridium botulinum F str. 230613] Length = 497 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|170741268|ref|YP_001769923.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195542|gb|ACA17489.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 670 Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE C LC CV CP + + L+ C+ CG+C CP D I EP L Sbjct: 521 TEACTLCHA--CVGACPTGALSDDPDRPLLSFSESLCVQCGLCAATCPEDVIT--LEPRL 576 Query: 64 EL 65 + Sbjct: 577 DF 578 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 8/60 (13%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H + C++VCP + +A+ P C CG C CP A P Sbjct: 272 LCAHARSRITGCSRCLDVCPTGAIAPAGDHVAVDPFVCAGCGSCASVCPTGAAAATLPPA 331 >gi|153932223|ref|YP_001385620.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|153936790|ref|YP_001389026.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] gi|152928267|gb|ABS33767.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|152932704|gb|ABS38203.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] Length = 497 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|26249298|ref|NP_755338.1| putative electron transport protein ygfS [Escherichia coli CFT073] gi|91212263|ref|YP_542249.1| putative electron transport protein YgfS [Escherichia coli UTI89] gi|237706472|ref|ZP_04536953.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|26109705|gb|AAN81908.1|AE016765_310 Putative electron transport protein ygfS [Escherichia coli CFT073] gi|91073837|gb|ABE08718.1| putative electron transport protein YgfS [Escherichia coli UTI89] gi|226899512|gb|EEH85771.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 163 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 115 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ S NP Sbjct: 116 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASSENP 162 >gi|20089203|ref|NP_615278.1| formylmethanofuran dehydrogenase, subunit F [Methanosarcina acetivorans C2A] gi|19914078|gb|AAM03758.1| formylmethanofuran dehydrogenase, subunit F [Methanosarcina acetivorans C2A] Length = 346 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Query: 14 HTDCVEVCPVDCFY-----EGENFLAI--HPDECIDCGVCEPECPVDAI 55 HT C++VCP + + GE I PD CI CG C CPVDAI Sbjct: 185 HT-CIDVCPANAIFNKKAKSGERVEKITHRPDACIYCGACAVSCPVDAI 232 >gi|325121371|gb|ADY80894.1| putative iron-sulfur protein [Acinetobacter calcoaceticus PHEA-2] Length = 263 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|307596266|ref|YP_003902583.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551467|gb|ADN51532.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 445 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +CV CP + N + I+ CI+CG+C CP A+ Sbjct: 118 ECVNACPANAISIVNNRVTINESACIECGLCVSRCPTGAL 157 >gi|298530775|ref|ZP_07018177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510149|gb|EFI34053.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 307 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C +C + CP + D C+ CGVC CPV +K + Sbjct: 239 ELCIKC--GECAQACPFQAIAMSREGPVVSQDLCMGCGVCVSRCPVQGLKLKRQKDKSPP 296 Query: 67 LKINS 71 L++NS Sbjct: 297 LEVNS 301 >gi|157737741|ref|YP_001490425.1| 4Fe-4S ferredoxin, iron-sulfur binding [Arcobacter butzleri RM4018] gi|157699595|gb|ABV67755.1| 4Fe-4S ferredoxin, iron-sulfur binding [Arcobacter butzleri RM4018] Length = 557 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 NC LC CV C VD + E + L I+P C CG CE CP T+ +EL Sbjct: 428 NCTLC--LSCVGACNVDALFANEADFTLRINPSLCTACGYCEVSCPEADCLTITKDEIEL 485 Query: 66 ---WLKIN 70 W K N Sbjct: 486 QPSWFKEN 493 >gi|157373499|ref|YP_001472099.1| anaerobic dimethyl sulfoxide reductase, subunit B [Shewanella sediminis HAW-EB3] gi|157315873|gb|ABV34971.1| anaerobic dimethyl sulfoxide reductase, subunit B [Shewanella sediminis HAW-EB3] Length = 205 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + +C C C + CP ++ + + IH D CI C CE CP DA + D Sbjct: 58 FAYYTSISCNHCDTPACTKACPTGAMHKRSEDGLVMIHDDICIGCSSCEQACPYDAPQLD 117 Query: 59 TEPG 62 G Sbjct: 118 EARG 121 >gi|83591098|ref|YP_431107.1| thiamine pyrophosphate enzyme [Moorella thermoacetica ATCC 39073] gi|83574012|gb|ABC20564.1| Thiamine pyrophosphate enzyme [Moorella thermoacetica ATCC 39073] Length = 631 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V +NC+ C++ C+++ CP F +G I P C CG+C CP +AI+ E Sbjct: 575 VSPDNCLSCRY--CLDLGCPAISFSDGHG--VIDPVLCNGCGLCTQVCPGEAIRKAGE 628 >gi|288932304|ref|YP_003436364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894552|gb|ADC66089.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 127 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 TE C+ C C+ VCP F GE+ + ++ +CI CG C CP+ A++ Sbjct: 75 TEKCVDCGA--CISVCPTGVFERGEDDRIVVNEVKCIRCGFCVGVCPLKALR 124 >gi|215484255|ref|YP_002326482.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii AB307-0294] gi|260555960|ref|ZP_05828180.1| electron transport complex [Acinetobacter baumannii ATCC 19606] gi|332853651|ref|ZP_08434881.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013150] gi|332870830|ref|ZP_08439475.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013113] gi|193076747|gb|ABO11457.2| putative iron-sulfur protein [Acinetobacter baumannii ATCC 17978] gi|213987984|gb|ACJ58283.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii AB307-0294] gi|260410871|gb|EEX04169.1| electron transport complex [Acinetobacter baumannii ATCC 19606] gi|332728475|gb|EGJ59849.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013150] gi|332731931|gb|EGJ63209.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013113] Length = 263 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|58581545|ref|YP_200561.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426139|gb|AAW75176.1| ferredoxin II [Xanthomonas oryzae pv. oryzae KACC10331] Length = 156 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++V +CI C T C+ CPVD G + + C C +C P CPVD I+ Sbjct: 97 VAWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAPLCTGCELCLPACPVDCIE 151 >gi|125972856|ref|YP_001036766.1| hydrogenase large subunit-like protein [Clostridium thermocellum ATCC 27405] gi|256005726|ref|ZP_05430681.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 2360] gi|281417055|ref|ZP_06248075.1| Fe-S cluster domain protein [Clostridium thermocellum JW20] gi|125713081|gb|ABN51573.1| hydrogenase large subunit-like protein [Clostridium thermocellum ATCC 27405] gi|255990299|gb|EEU00426.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 2360] gi|281408457|gb|EFB38715.1| Fe-S cluster domain protein [Clostridium thermocellum JW20] gi|316940906|gb|ADU74940.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 1313] Length = 448 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 3 YVVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT + + CK T+C++ CP + ++ I + CIDCG C CP A K T+P Sbjct: 6 HSVTLDEVKCKGCTNCIKRCPTEAIRVRKSKARIINERCIDCGECIRVCPYHAKKAITDP 65 Query: 62 GLELWLKINSEYATQWPNITTKKESLPS------AAKMDGVKQKYE 101 + L + A P++ + +S PS A KM G +E Sbjct: 66 -IGLINDYKYKVAIPAPSLYGQLKSAPSRDHILTALKMCGFDDVFE 110 >gi|315637523|ref|ZP_07892731.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] gi|315478182|gb|EFU68907.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] Length = 557 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 NC LC CV C VD + E + L I+P C CG CE CP T+ +EL Sbjct: 428 NCTLC--LSCVGACNVDALFANEADFTLRINPSLCTACGYCEVSCPEADCLTITKDEIEL 485 Query: 66 ---WLKIN 70 W K N Sbjct: 486 QPSWFKEN 493 >gi|302335002|ref|YP_003800209.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] gi|301318842|gb|ADK67329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] Length = 423 Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C++VCPVD GE+ + + D C CG+C CP +A+ Sbjct: 72 CLDVCPVDAIEIGESSVRV-ADGCRKCGLCTMVCPTEAL 109 >gi|300785105|ref|YP_003765396.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] gi|299794619|gb|ADJ44994.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] Length = 346 Score = 37.0 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPD 58 + ++ C C H C++VCP + E + + D C CG C CP I +PD Sbjct: 161 MASDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVIDRRPD 218 >gi|222480730|ref|YP_002566967.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453632|gb|ACM57897.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 109 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 11/72 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLA-IHPDECIDCGVCEPECPV 52 T+V + I C+E CPVD F E E + + D+CIDC +C CPV Sbjct: 37 THVAVDFDICLADGACLEDCPVDVFEWVDTPGHPESERKASPVDEDQCIDCMLCVDVCPV 96 Query: 53 DAIKPDTEPGLE 64 DAI D +PG E Sbjct: 97 DAI--DVDPGRE 106 >gi|303257710|ref|ZP_07343722.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302859680|gb|EFL82759.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 192 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 C C++ CV+ CP Y EN L + PD+C+ C C CP DA Sbjct: 67 CQQCENAPCVKTCPFGANYYDENGLVRNDPDKCVGCNYCIASCPYDA 113 >gi|300856191|ref|YP_003781175.1| fumarate reductase/succinate dehydrogenase flavoprotein-like protein [Clostridium ljungdahlii DSM 13528] gi|300436306|gb|ADK16073.1| fumarate reductase/succinate dehydrogenase flavoprotein-like protein [Clostridium ljungdahlii DSM 13528] Length = 926 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 C+EVCP DC + +++ I +C CG+C ECP +AI Sbjct: 334 CLEVCPEDCIEAKKGYISMIDEFDCTKCGICIDECPNNAI 373 >gi|262276174|ref|ZP_06053983.1| iron-sulfur cluster-binding protein [Grimontia hollisae CIP 101886] gi|262219982|gb|EEY71298.1| iron-sulfur cluster-binding protein [Grimontia hollisae CIP 101886] Length = 570 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T +C LC CV VCP + +C+ CG+CE CP I Sbjct: 433 VKTHDCTLC--MGCVAVCPTGALSSIGSRPGITFREQDCVQCGLCESSCPESVIT----- 485 Query: 62 GLELWLKINSEYATQ 76 LE NSE Q Sbjct: 486 -LEPRFNWNSEQRQQ 499 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDTEPGLELWLKINS 71 T C++ CP + + I+P C G C CP +AI PD E + Sbjct: 212 TRCIDACPAEALSTINQTITINPYLCQGIGSCATVCPTEAISYALPDPENTQHFVFDLIQ 271 Query: 72 EYATQWPNITT 82 Y Q + T Sbjct: 272 HYRQQGGEVPT 282 >gi|253570623|ref|ZP_04848031.1| H2-dehydrogenase [Bacteroides sp. 1_1_6] gi|251839572|gb|EES67655.1| H2-dehydrogenase [Bacteroides sp. 1_1_6] Length = 387 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Query: 8 NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVD--AIKPDT 59 NC C C EVCP C +G + + CIDCG CE CP IK DT Sbjct: 11 NCSGCNA--CAEVCPKHCIEMVPDKKGFFYPKVDAVTCIDCGACEKVCPFQDGNIKLDT 67 >gi|226950727|ref|YP_002805818.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] gi|226844550|gb|ACO87216.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] gi|322807610|emb|CBZ05185.1| periplasmic [Fe] hydrogenase [Clostridium botulinum H04402 065] Length = 497 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 >gi|221636035|ref|YP_002523911.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomicrobium roseum DSM 5159] gi|221157849|gb|ACM06967.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomicrobium roseum DSM 5159] Length = 510 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV +CP F + + D CI C C CP DA+ D Sbjct: 58 CNHCDDAPCVTICPTKALFRRPDGIVDFDADRCIGCKSCMQACPYDALYID 108 >gi|162456775|ref|YP_001619142.1| putative anaerobic reductase component [Sorangium cellulosum 'So ce 56'] gi|161167357|emb|CAN98662.1| putative anaerobic reductase component [Sorangium cellulosum 'So ce 56'] Length = 580 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 VT C C C+ CPV YE + I D+CI C C CP DA K + E Sbjct: 127 VTTACHHCLDPACMSGCPVKA-YEKDPITGIVKHLDDQCIGCQYCILMCPYDAPKFNAER 185 Query: 62 GL 63 G+ Sbjct: 186 GI 187 >gi|310780615|ref|YP_003968946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749938|gb|ADO84598.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 104 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 + CI C+ CVEVCP + + F A P EC DC C ECPV AI Sbjct: 7 AKRCIGCRL--CVEVCPGNLISLDKKFKAEIYDPRECWDCTACMKECPVQAI 56 >gi|22298281|ref|NP_681528.1| hypothetical protein tlr0739 [Thermosynechococcus elongatus BP-1] gi|22294460|dbj|BAC08290.1| tlr0739 [Thermosynechococcus elongatus BP-1] Length = 342 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C +CP + E + D C CG C P CP I D +P + Sbjct: 105 CERICPAEAIRFHEQVQGVVRDRCYGCGRCLPLCPWGLISTDEQPAV 151 >gi|332971171|gb|EGK10135.1| NADH-quinone oxidoreductase subunit I [Psychrobacter sp. 1501(2011)] Length = 182 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVACISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 117 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 118 LTPDFELG---------EYVRQ--NLVYEKEHL 139 >gi|332305736|ref|YP_004433587.1| electron transport complex, RnfABCDGE type, B subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173065|gb|AEE22319.1| electron transport complex, RnfABCDGE type, B subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 188 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 110 VAYIREDECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVDPCPVDCI 163 >gi|257791615|ref|YP_003182221.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257475512|gb|ACV55832.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 206 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C C++ C++VCPV Y+ + + IH D+CI C +C CP +A Sbjct: 65 CQHCENPACLKVCPVGATYKDDMGRVEIHYDKCIGCRICMAACPYNA 111 >gi|171058834|ref|YP_001791183.1| putative glutamate synthase (NADPH) small subunit [Leptothrix cholodnii SP-6] gi|170776279|gb|ACB34418.1| Glutamate synthase (NADH) [Leptothrix cholodnii SP-6] Length = 571 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 NC C +C VCP + + G F I+ D C CG+C ECP AI+ E G Sbjct: 517 NCFECD--NCYGVCPDNAVIKLGPGRRF-EINLDYCKGCGMCAAECPCGAIEMVAETG 571 >gi|169796778|ref|YP_001714571.1| hypothetical protein ABAYE2765 [Acinetobacter baumannii AYE] gi|213156829|ref|YP_002318490.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB0057] gi|239502943|ref|ZP_04662253.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB900] gi|301345598|ref|ZP_07226339.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB056] gi|301510039|ref|ZP_07235276.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB058] gi|301597671|ref|ZP_07242679.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB059] gi|169149705|emb|CAM87596.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|213055989|gb|ACJ40891.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB0057] Length = 263 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|170717615|ref|YP_001784697.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Haemophilus somnus 2336] gi|168825744|gb|ACA31115.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haemophilus somnus 2336] Length = 245 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LC H D CV+VCPV Y+ ++ + I CI C C CP DA ++E Sbjct: 98 LCNHCDNPPCVQVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDARFINSE 151 >gi|284929331|ref|YP_003421853.1| NADH:ubiquinone oxidoreductase chain I-like protein [cyanobacterium UCYN-A] gi|284809775|gb|ADB95472.1| NADH:ubiquinone oxidoreductase chain I-like protein [cyanobacterium UCYN-A] Length = 80 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Query: 15 TDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV-DAIKPDTEP 61 DC E CPV C +EG ++ I CIDCG+C CPV AI + P Sbjct: 20 ADCAEACPVACIHEGPGKNLKGTSWYWIDFSVCIDCGICLQVCPVKGAIIAEERP 74 >gi|254284151|ref|ZP_04959119.1| electron transport complex protein RnfB [gamma proteobacterium NOR51-B] gi|219680354|gb|EED36703.1| electron transport complex protein RnfB [gamma proteobacterium NOR51-B] Length = 200 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 113 VAYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIVDECTGCDLCVEPCPVDCI 166 >gi|197285613|ref|YP_002151485.1| NADH dehydrogenase subunit I [Proteus mirabilis HI4320] gi|227356116|ref|ZP_03840506.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis ATCC 29906] gi|226737407|sp|B4EZC3|NUOI_PROMH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|194683100|emb|CAR43657.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis HI4320] gi|227163761|gb|EEI48673.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis ATCC 29906] Length = 180 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C E E+ F I+ CI CG+CE CP A++ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTALQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|89074883|ref|ZP_01161333.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium sp. SKA34] gi|89049280|gb|EAR54843.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium sp. SKA34] Length = 551 Score = 37.0 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + N L ++C+ CG+CE CP I Sbjct: 416 TTDCTLC--MSCVAVCPTRALHAIGNRPGLLFIEEDCVQCGMCEKACPEKVI 465 >gi|238790208|ref|ZP_04633984.1| Electron transport complex protein rnfB [Yersinia frederiksenii ATCC 33641] gi|238721746|gb|EEQ13410.1| Electron transport complex protein rnfB [Yersinia frederiksenii ATCC 33641] Length = 207 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|332296989|ref|YP_004438911.1| NADH dehydrogenase (quinone) [Treponema brennaborense DSM 12168] gi|332180092|gb|AEE15780.1| NADH dehydrogenase (quinone) [Treponema brennaborense DSM 12168] Length = 593 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 +++ +TE CI C C CP +C GE + I +C+ CG CE C +AI Sbjct: 537 ISFFITEKCIGCGA--CARQCPANCI-TGEKKMRHTIEQSKCLKCGACETTCKFNAI 590 >gi|317489694|ref|ZP_07948198.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|316911288|gb|EFV32893.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] Length = 216 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 59 FSYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 Query: 59 TEPG 62 G Sbjct: 119 RVKG 122 >gi|325968086|ref|YP_004244278.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta moutnovskia 768-28] gi|323707289|gb|ADY00776.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta moutnovskia 768-28] Length = 444 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 23/40 (57%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 DCV CP + N + I+ + CI+CG+C +CP A+ Sbjct: 117 DCVNACPTNATSIVNNRVVINENACIECGLCVSKCPTGAL 156 >gi|218283672|ref|ZP_03489633.1| hypothetical protein EUBIFOR_02227 [Eubacterium biforme DSM 3989] gi|218215661|gb|EEC89199.1| hypothetical protein EUBIFOR_02227 [Eubacterium biforme DSM 3989] Length = 505 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C EVCP D + I ++CI CG C CP AI P Sbjct: 117 VTNACQGCLSHQCTEVCPKDAIHIVNGKSCIDQEKCIKCGRCMDACPYHAITKLERP 173 >gi|187934487|ref|YP_001886193.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] gi|187722640|gb|ACD23861.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] Length = 646 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 220 ITKKCIGC--GSCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 >gi|297617763|ref|YP_003702922.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145600|gb|ADI02357.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 354 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CPV E+ ++ D CI CG+C +CP +AI Sbjct: 286 ERCPVKAIEMIEDIAVLNNDRCIGCGLCVSKCPTNAI 322 >gi|226327874|ref|ZP_03803392.1| hypothetical protein PROPEN_01755 [Proteus penneri ATCC 35198] gi|225203578|gb|EEG85932.1| hypothetical protein PROPEN_01755 [Proteus penneri ATCC 35198] Length = 180 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C E E+ F I+ CI CG+CE CP A++ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTALQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|148653489|ref|YP_001280582.1| NADH dehydrogenase subunit I [Psychrobacter sp. PRwf-1] gi|148572573|gb|ABQ94632.1| NADH-quinone oxidoreductase, chain I [Psychrobacter sp. PRwf-1] Length = 182 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVACISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 117 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 118 LTPDFELG---------EYVRQ--NLVYEKEHL 139 >gi|238785613|ref|ZP_04629592.1| Electron transport complex protein rnfB [Yersinia bercovieri ATCC 43970] gi|238713500|gb|EEQ05533.1| Electron transport complex protein rnfB [Yersinia bercovieri ATCC 43970] Length = 207 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|317406714|gb|EFV86874.1| tetrathionate reductase subunit B [Achromobacter xylosoxidans C54] Length = 255 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA--IKPDTE 60 LC H D CV VCPV ++ E+ + + +E C+ CG C CP DA I DT+ Sbjct: 110 LCNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDARFINHDTQ 165 >gi|205351901|ref|YP_002225702.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856078|ref|YP_002242729.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271682|emb|CAR36512.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707881|emb|CAR32169.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626939|gb|EGE33282.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 185 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|182414463|ref|YP_001819529.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Opitutus terrae PB90-1] gi|177841677|gb|ACB75929.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Opitutus terrae PB90-1] Length = 538 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 9/56 (16%) Query: 7 ENCIL-CKHTDCV---EVCP---VDCFYEGENFLA--IHPDECIDCGVCEPECPVD 53 E CI+ K TDC E CP VD G+N +H + CI CG CE CP D Sbjct: 449 EKCIVKTKGTDCAACSEHCPTKAVDTKPYGDNLRLPWVHGESCIGCGACEFACPAD 504 >gi|156934092|ref|YP_001438008.1| hypothetical protein ESA_01918 [Cronobacter sakazakii ATCC BAA-894] gi|156532346|gb|ABU77172.1| hypothetical protein ESA_01918 [Cronobacter sakazakii ATCC BAA-894] Length = 209 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C CP + +G+ + ++ D+C+ CG C CP A + + Sbjct: 70 FAYTLSISCNHCADPICTRNCPTTAMHKRDGDGIVRVNTDKCVGCGYCAWSCPYGAPQRN 129 Query: 59 TEPG 62 T+ G Sbjct: 130 TQTG 133 >gi|219667677|ref|YP_002458112.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537937|gb|ACL19676.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 206 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI-----KPDTEPG 62 C C++ CV+VCPV Y+ E+ + I+ D CI C C CP +A +P +PG Sbjct: 66 CQHCENAACVKVCPVGATYKDESGRVVINYDRCIGCRFCMAACPYNARVFNWEEPVRDPG 125 Query: 63 L 63 Sbjct: 126 F 126 >gi|297617551|ref|YP_003702710.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophothermus lipocalidus DSM 12680] gi|297145388|gb|ADI02145.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophothermus lipocalidus DSM 12680] Length = 582 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV E C C+ C+++ C + E E I+P+ C+ CG+C C +DAI Sbjct: 523 MYYVDEEACKGCRL--CIKIGCTGIYWIEEERIARINPNLCVGCGLCAQICKLDAI 576 >gi|218130737|ref|ZP_03459541.1| hypothetical protein BACEGG_02328 [Bacteroides eggerthii DSM 20697] gi|217987081|gb|EEC53412.1| hypothetical protein BACEGG_02328 [Bacteroides eggerthii DSM 20697] Length = 427 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 5/42 (11%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 +C+H D +++ +C F+ I D+CI+CG+C+ CP+ Sbjct: 23 ICRH-DAIKIVERNCL----PFVQIDADKCINCGLCQKACPI 59 >gi|169633882|ref|YP_001707618.1| hypothetical protein ABSDF2362 [Acinetobacter baumannii SDF] gi|169152674|emb|CAP01675.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 263 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|126733437|ref|ZP_01749184.1| 4Fe-4S binding domain protein [Roseobacter sp. CCS2] gi|126716303|gb|EBA13167.1| 4Fe-4S binding domain protein [Roseobacter sp. CCS2] Length = 253 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D + G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRAEDGIVLVNESDCIGCGLCAWACPYGARELDAKEGV 138 >gi|16763989|ref|NP_459604.1| hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414251|ref|YP_151326.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179213|ref|YP_215630.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615182|ref|YP_001589147.1| hypothetical protein SPAB_02950 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550859|ref|ZP_02344615.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231615|ref|ZP_02656673.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240451|ref|ZP_02665383.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260879|ref|ZP_02682852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465779|ref|ZP_02699661.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818769|ref|ZP_02830769.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444851|ref|YP_002039852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449002|ref|YP_002044643.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470652|ref|ZP_03076636.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249684|ref|YP_002145585.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262291|ref|ZP_03162365.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363174|ref|YP_002142811.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245238|ref|YP_002214603.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390569|ref|ZP_03217180.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238911563|ref|ZP_04655400.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419123|gb|AAL19563.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128508|gb|AAV78014.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126846|gb|AAX64549.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364546|gb|ABX68314.1| hypothetical protein SPAB_02950 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403514|gb|ACF63736.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407306|gb|ACF67525.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457016|gb|EDX45855.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632027|gb|EDX50547.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094651|emb|CAR60175.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213387|gb|ACH50784.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240546|gb|EDY23166.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939754|gb|ACH77087.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603014|gb|EDZ01560.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324243|gb|EDZ12082.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334041|gb|EDZ20805.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340164|gb|EDZ26928.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344169|gb|EDZ30933.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349919|gb|EDZ36550.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261245885|emb|CBG23686.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301157213|emb|CBW16700.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911643|dbj|BAJ35617.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084879|emb|CBY94669.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226189|gb|EFX51240.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713677|gb|EFZ05248.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128928|gb|ADX16358.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622355|gb|EGE28700.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 185 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|332161836|ref|YP_004298413.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605661|emb|CBY27159.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica Y11] gi|325666066|gb|ADZ42710.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 207 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|315180126|gb|ADT87040.1| iron-sulfur cluster-binding protein [Vibrio furnissii NCTC 11218] Length = 553 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGE-NFLAIHPDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + EGE L +C+ CG+C CP +A+ Sbjct: 417 TTDCTLC--MSCVAVCPTRALHHEGELPSLKFVEQDCVQCGLCVKACPENAL 466 >gi|317487970|ref|ZP_07946553.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833273|ref|ZP_08165779.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|316912919|gb|EFV34445.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485655|gb|EGC88123.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 206 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C C++ C++VCPV Y+ + + IH D+CI C +C CP +A Sbjct: 65 CQHCENPACLKVCPVGATYKDDMGRVEIHYDKCIGCRICMAACPYNA 111 >gi|291557048|emb|CBL34165.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum V10Sc8a] Length = 560 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CPV + I DECI CG+C CP +A I+ D EL Y Sbjct: 17 CIRHCPVKSIRFSDGQANIVEDECILCGMCFVACPQNAKQIRNDVGKAKELIASGTPVYV 76 Query: 75 TQWPNITTKKESLPSAAKMDGVKQ 98 + P+ + + A D +K+ Sbjct: 77 SIAPSFVANYDGIGITALNDALKK 100 >gi|271502701|ref|YP_003335727.1| glutamate synthase small subunit [Dickeya dadantii Ech586] gi|270346256|gb|ACZ79021.1| glutamate synthase, small subunit [Dickeya dadantii Ech586] Length = 667 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ + C +VCP ++ + + ++CI C C CP AI + + Sbjct: 56 CRHCEDSPCAKVCPTQALVRKQDGIQLIAEKCIGCKTCVLACPFGAISVENQ 107 >gi|51893221|ref|YP_075912.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] gi|51856910|dbj|BAD41068.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] Length = 256 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 V C+ C C VCPV Y+GE+ + I D CI C C CP A Sbjct: 101 VPRPCMQCDSPPCAGVCPVGATYKGESGIVVIDDDRCIGCRYCIAACPYGA 151 >gi|260550717|ref|ZP_05824925.1| electron transport complex [Acinetobacter sp. RUH2624] gi|260406223|gb|EEW99707.1| electron transport complex [Acinetobacter sp. RUH2624] Length = 263 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|288931637|ref|YP_003435697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893885|gb|ADC65422.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 235 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y V + C+ C+ CV+VCPV+ + + F+ I D CI C C CP A Sbjct: 103 AYFVPKLCMHCEKPPCVKVCPVNATWLTDDGFVLIDEDHCIGCKYCIQACPYGA 156 >gi|315231407|ref|YP_004071843.1| indolepyruvate oxidoreductase IorA-like subunit [Thermococcus barophilus MP] gi|315184435|gb|ADT84620.1| indolepyruvate oxidoreductase IorA-like subunit [Thermococcus barophilus MP] Length = 616 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V+ + C+ CK + CP + N + I P C CG+C CP +AIK +E G Sbjct: 555 VIEDKCVGCKACILLTGCPALVYDPETNKVRIDPLICTGCGICNQLCPFEAIKFPSEIG 613 >gi|123442265|ref|YP_001006246.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089226|emb|CAL12072.1| putative iron-sulfur protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 207 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|118471643|ref|YP_889770.1| 4Fe-4S ferredoxin iron-sulfur binding [Mycobacterium smegmatis str. MC2 155] gi|118172930|gb|ABK73826.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mycobacterium smegmatis str. MC2 155] Length = 133 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 7/66 (10%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDA--I 55 M +V+ + CI C CV+VCP D F G++ + + +C C +CE CP DA + Sbjct: 1 MIEIVSRSACIACDV--CVKVCPTDVFDRGDDGIPVIARQSDCQTCFMCEAYCPTDALYV 58 Query: 56 KPDTEP 61 P +EP Sbjct: 59 APVSEP 64 >gi|332298933|ref|YP_004440855.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] gi|332182036|gb|AEE17724.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] Length = 491 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+VT C C C+ C E I P++C++CG+C CP AI Sbjct: 112 YMVTNACQACLARPCMMNCAKKAIAITEGRARIDPEKCVNCGLCMQNCPYHAI 164 >gi|322613255|gb|EFY10198.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621325|gb|EFY18182.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623744|gb|EFY20582.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629016|gb|EFY25795.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631738|gb|EFY28492.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637526|gb|EFY34228.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641866|gb|EFY38496.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646711|gb|EFY43217.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651411|gb|EFY47791.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653138|gb|EFY49472.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658858|gb|EFY55113.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664872|gb|EFY61065.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668874|gb|EFY65026.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670620|gb|EFY66753.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675361|gb|EFY71437.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682168|gb|EFY78193.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685001|gb|EFY80998.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193939|gb|EFZ79141.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197969|gb|EFZ83091.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201984|gb|EFZ87044.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207117|gb|EFZ92070.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211672|gb|EFZ96506.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214356|gb|EFZ99107.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221507|gb|EGA05921.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225551|gb|EGA09781.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231109|gb|EGA15225.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234059|gb|EGA18148.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238246|gb|EGA22304.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242520|gb|EGA26544.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248503|gb|EGA32437.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251281|gb|EGA35153.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259209|gb|EGA42852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261520|gb|EGA45099.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264799|gb|EGA48300.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272364|gb|EGA55771.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 185 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|289523847|ref|ZP_06440701.1| conserved domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502503|gb|EFD23667.1| conserved domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 57 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C+ CV VCP + + + PD CI+CG C CPV AI Sbjct: 9 DTCIGCEA--CVGVCPAEAISIEDGKAKVDPDTCIECGACVSTCPVSAIS 56 >gi|307267356|ref|ZP_07548851.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917614|gb|EFN47893.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 154 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C +CV VCP D + I P++C DCG C CPV AI Sbjct: 109 CIGC--GNCVRVCPFDAIELKDGIAYIDPNKCRDCGRCIDICPVGAI 153 >gi|288931276|ref|YP_003435336.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Ferroglobus placidus DSM 10642] gi|288893524|gb|ADC65061.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Ferroglobus placidus DSM 10642] Length = 97 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +V E CI C CV+ CP C +G + D C CG+C CPV+AI+ Sbjct: 29 AFVDEEKCIGCGR--CVKFCPEPCIELVEKDGNKVAKVDHDYCKGCGICASVCPVNAIRM 86 Query: 58 DTE 60 +T+ Sbjct: 87 ETK 89 >gi|297568110|ref|YP_003689454.1| FAD dependent oxidoreductase [Desulfurivibrio alkaliphilus AHT2] gi|296924025|gb|ADH84835.1| FAD dependent oxidoreductase [Desulfurivibrio alkaliphilus AHT2] Length = 680 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 12/53 (22%) Query: 8 NCILCKHTDCVEVCPVDCFY---------EGENFLAIHPDECIDCGVCEPECP 51 +C LC+ DC +C C Y EGE + PD CI CG C CP Sbjct: 621 SCGLCR--DC-HICENTCHYGAISRRDLGEGEFEYVVDPDRCIGCGFCAGTCP 670 >gi|257790196|ref|YP_003180802.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474093|gb|ACV54413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 209 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + V+ C C C+EVCP + E +++ CI CG C CP A K D Sbjct: 59 FAFYVSSACNHCASPACMEVCPTGAMGKNELGLVSVDEHRCIGCGYCALSCPYHAPKVDR 118 Query: 60 EPG 62 G Sbjct: 119 TVG 121 >gi|168236599|ref|ZP_02661657.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736674|ref|YP_002113729.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712176|gb|ACF91397.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290426|gb|EDY29782.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 185 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|150402886|ref|YP_001330180.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033916|gb|ABR66029.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 68 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 11/69 (15%) Query: 1 MTYVVTENCILCKHTD-CVEVCPVDCFYEGENF--------LAIHPDECIDCGVCEPECP 51 M ++ EN CK D C+EVCP D + + E + ++P EC +C +C +CP Sbjct: 1 MKIIIDEN--YCKGCDICIEVCPKDVYKKSETLNKKGIYPPIPVNPKECTNCQLCILQCP 58 Query: 52 VDAIKPDTE 60 AI +TE Sbjct: 59 DQAITVETE 67 >gi|1353257|gb|AAB06234.1| dimethyl sulphoxide reductase subunit B [Haemophilus influenzae] Length = 205 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D + Sbjct: 61 YYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQK 120 Query: 62 G 62 G Sbjct: 121 G 121 >gi|251779851|ref|ZP_04822771.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084166|gb|EES50056.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 646 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 220 ITKKCIGC--GSCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 >gi|283832974|ref|ZP_06352715.1| putative polyferredoxin [Citrobacter youngae ATCC 29220] gi|291071581|gb|EFE09690.1| putative polyferredoxin [Citrobacter youngae ATCC 29220] Length = 290 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 23/40 (57%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV +CPV+ I+ DECI CG C CPVDA++ Sbjct: 31 CVSICPVNAISLSPAGPEINDDECIRCGNCLFACPVDALQ 70 >gi|271498826|ref|YP_003331851.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270342381|gb|ACZ75146.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 184 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 C C+H C++ CPV+ + + E+ + +H P CI C C CP A K Sbjct: 57 CNHCEHPACLDACPVEAYTKREDGIVVHDPARCIGCKNCLRSCPYGAPK 105 >gi|254513803|ref|ZP_05125864.1| electron transport complex protein RnfB [gamma proteobacterium NOR5-3] gi|219676046|gb|EED32411.1| electron transport complex protein RnfB [gamma proteobacterium NOR5-3] Length = 202 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +++ E+CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 113 VAFIIEEDCIGC--TKCIQACPVDAIVGAAKQMHTVIAAECTGCDLCVDPCPVDCIE 167 >gi|238792134|ref|ZP_04635769.1| Electron transport complex protein rnfB [Yersinia intermedia ATCC 29909] gi|238728371|gb|EEQ19890.1| Electron transport complex protein rnfB [Yersinia intermedia ATCC 29909] Length = 207 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|304391506|ref|ZP_07373448.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ahrensia sp. R2A130] gi|303295735|gb|EFL90093.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ahrensia sp. R2A130] Length = 273 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + + D+CI CG+C C A + D G+ Sbjct: 97 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVDEDKCIGCGLCAWSCAYGAREMDAAAGV 155 >gi|260913866|ref|ZP_05920340.1| electron transport complex [Pasteurella dagmatis ATCC 43325] gi|260631953|gb|EEX50130.1| electron transport complex [Pasteurella dagmatis ATCC 43325] Length = 197 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ E CI C T C++ CPVD + I PD C C +C P CP D I Sbjct: 106 VAFIDEEMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVPPCPTDCIS 160 >gi|150016647|ref|YP_001308901.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] gi|149903112|gb|ABR33945.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] Length = 644 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I + C CG C CPVDAI Sbjct: 218 ITKKCIGCGA--CKRACPVDCINGELKKKHEIDYNRCTHCGACVSACPVDAI 267 >gi|224369388|ref|YP_002603552.1| 4Fe-4S ferredoxin, iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] gi|223692105|gb|ACN15388.1| 4Fe-4S ferredoxin, iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] Length = 519 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYE-GENFL---AIHPDECIDCGVCEPECPV 52 C EVCP Y EN + + PD CI CG C+ CPV Sbjct: 439 CAEVCPTHAVYTIKENNVHHPRLAPDACIGCGACQQVCPV 478 >gi|218780883|ref|YP_002432201.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762267|gb|ACL04733.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 354 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 12/89 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E+C C+ C+E C + ++ I+ D CI CG+C CP +AI Sbjct: 274 VSDEDCTGCE--TCLERCQMGAIDMKDDVAQINLDRCIGCGLCVTTCPTEAIT------- 324 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAK 92 L SE A + P + ++ + A K Sbjct: 325 ---LAAKSENAMRLPPASMMEQMMGMAQK 350 >gi|158321273|ref|YP_001513780.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] gi|158141472|gb|ABW19784.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] Length = 631 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + +TE CI C T C CPV C + + I + CI CG C CPV A+ Sbjct: 575 LEFYITEKCIGC--TKCARNCPVSCISGKVKERHVIDTEACIKCGNCMAVCPVGAV 628 >gi|20092114|ref|NP_618189.1| hypothetical protein MA3299 [Methanosarcina acetivorans C2A] gi|19917334|gb|AAM06669.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 438 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 25/49 (51%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK E CP+ +GEN +P+ C +CG+C C +A Sbjct: 331 EKCIDCKICCVAEACPMGAVSKGENGAVHNPELCFNCGLCISRCKGEAF 379 >gi|16759572|ref|NP_455189.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142655|ref|NP_805997.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213023991|ref|ZP_03338438.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213051862|ref|ZP_03344740.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419294|ref|ZP_03352360.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425125|ref|ZP_03357875.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581054|ref|ZP_03362880.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622427|ref|ZP_03375210.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647695|ref|ZP_03377748.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289812473|ref|ZP_06543102.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25285330|pir||AG0577 molybdopterin-containing oxidoreductase iron-sulfur chain STY0660 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501864|emb|CAD05089.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29138286|gb|AAO69857.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 185 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|238796520|ref|ZP_04640028.1| Electron transport complex protein rnfB [Yersinia mollaretii ATCC 43969] gi|238719725|gb|EEQ11533.1| Electron transport complex protein rnfB [Yersinia mollaretii ATCC 43969] Length = 207 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|330508939|ref|YP_004385367.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta concilii GP-6] gi|328929747|gb|AEB69549.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta concilii GP-6] Length = 811 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV + CI CK CV+VCP ++ + C CG C CPVDAIK Sbjct: 573 YVDPDLCIKCKL--CVDVCPQKAI-SVKSPAYVDEAACKGCGSCAAACPVDAIK 623 >gi|325830302|ref|ZP_08163759.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|325487769|gb|EGC90207.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 216 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 59 FSYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 Query: 59 TEPG 62 G Sbjct: 119 RVKG 122 >gi|313905672|ref|ZP_07839033.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] gi|313469496|gb|EFR64837.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] Length = 206 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+NC C C+ VCP C I + C+ CG C CP A+ Sbjct: 153 YFVTDNCTGCG--SCLSVCPQSCIITTRIPYVIEQEHCLHCGNCLNTCPAGAV 203 >gi|242238729|ref|YP_002986910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] gi|242130786|gb|ACS85088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] Length = 208 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +LC+H + C +VCPV+ ++ + + + C+ C +C CP AI P Sbjct: 49 VLCRHCEDAPCAKVCPVNAIRHEDHAVMLDENACVGCKLCAIACPFGAITPS 100 >gi|224582445|ref|YP_002636243.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466972|gb|ACN44802.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 179 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 51 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 103 >gi|193215552|ref|YP_001996751.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089029|gb|ACF14304.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 199 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C++T C+ CP Y+ E+ + I+ D CI C C CP DA P Sbjct: 60 CMHCENTPCLSACPTGATYKTEDGIVRINYDRCIGCYACMIACPYDARYP 109 >gi|15668438|ref|NP_247236.1| carbon monoxide dehydrogenase iron sulfur subunit CooF1 [Methanocaldococcus jannaschii DSM 2661] gi|2494449|sp|Q57712|Y264_METJA RecName: Full=Uncharacterized protein MJ0264 gi|1592278|gb|AAB98251.1| carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF1) [Methanocaldococcus jannaschii DSM 2661] Length = 153 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + N + + D+C+ CG+C CP AI+ D Sbjct: 49 CMHCDRNPCLYACPENAIERINNKVVVIKDKCVGCGLCALACPFGAIRID 98 >gi|309781571|ref|ZP_07676306.1| iron-sulfur cluster-binding protein [Ralstonia sp. 5_7_47FAA] gi|308919676|gb|EFP65338.1| iron-sulfur cluster-binding protein [Ralstonia sp. 5_7_47FAA] Length = 708 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 E C LC CV CP + LA+ C+ CG+CE CP AI Sbjct: 578 ERCTLC--MACVGACPSQALRDQAERPVLAMIERNCVQCGLCETTCPESAI 626 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 17 CVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV+VC + +G + + P+ C+ CG C CP AI Sbjct: 328 CVDVCSASAIASQWKDGRGSVHVTPNLCVGCGACTTACPTGAI 370 >gi|260432364|ref|ZP_05786335.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416192|gb|EEX09451.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 249 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDAAAGV 138 >gi|257790233|ref|YP_003180839.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474130|gb|ACV54450.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 216 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 59 FSYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 Query: 59 TEPG 62 G Sbjct: 119 RVKG 122 >gi|161504217|ref|YP_001571329.1| hypothetical protein SARI_02324 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865564|gb|ABX22187.1| hypothetical protein SARI_02324 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 185 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|126732920|ref|ZP_01748710.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126706626|gb|EBA05701.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 649 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 10 ILCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +LC H T C+++CP +++ P C CG C CP AI D P Sbjct: 267 LLCAHSRAEQTGCTRCLDLCPTGAITPDGEHVSVDPLICAGCGACSAVCPSGAISYDAPP 326 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C LC CV +CP + + L D C+ CG+C CP +AI +P L+L Sbjct: 503 CTLC--LSCVSLCPSGALGDNPDRPELRFQEDACLQCGLCANVCPEEAIS--LQPQLDL 557 >gi|150377591|ref|YP_001314186.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150032138|gb|ABR64253.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 679 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEP 61 V + C LC CV CP + E A++ E C+ CG+C CP AI + Sbjct: 519 VNVDACTLC--LSCVSACPTGALSDSEERPALYFAESACVQCGLCAATCPEKAIALVPQL 576 Query: 62 GLELW 66 + W Sbjct: 577 DFQAW 581 >gi|150391791|ref|YP_001321840.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149951653|gb|ABR50181.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 598 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 VV+E C C C + CPVDC +G+ I ++CI CG C CP AI Sbjct: 544 VVSELCKKCGI--CAKKCPVDCISGVKGKEVYLIDQEKCIKCGACLEACPFKAI 595 >gi|260769053|ref|ZP_05877987.1| electron transport complex protein RnfB [Vibrio furnissii CIP 102972] gi|260617083|gb|EEX42268.1| electron transport complex protein RnfB [Vibrio furnissii CIP 102972] gi|315180794|gb|ADT87708.1| electron transport complex protein RnfB [Vibrio furnissii NCTC 11218] Length = 199 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|94968068|ref|YP_590116.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94550118|gb|ABF40042.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 84 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 10/63 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 M +V+ + C K C++ CP + + E + L I+P+EC+DCG C CP Sbjct: 1 MAHVIVDTCE--KDMLCIDSCPSNAIHPLKEETEWEAASQLYINPEECMDCGACISTCPT 58 Query: 53 DAI 55 ++I Sbjct: 59 NSI 61 >gi|308051297|ref|YP_003914863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307633487|gb|ADN77789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 562 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAI 55 V + C LC C +CP +G + A+ E C+ CG+CE CP AI Sbjct: 425 VDVDKCTLC--MSCAALCPSRALMDGGDSPALKFTEQACVQCGLCERACPEKAI 476 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 T C+ VCP D ++ + + P C G C CP A+ D Sbjct: 199 TRCLNVCPADAIESVDHKITVDPHLCHGAGSCTAACPTGALSYD 242 >gi|291280349|ref|YP_003497184.1| NADH-quinone oxidoreductase subunit I [Deferribacter desulfuricans SSM1] gi|290755051|dbj|BAI81428.1| NADH-quinone oxidoreductase, I subunit [Deferribacter desulfuricans SSM1] Length = 153 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 10/49 (20%) Query: 17 CVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 C VCP +C + GE + I D CI CG CE CPVDAI Sbjct: 69 CERVCPSECIHIETDAGPNGERLIRKYEIELDRCIYCGFCEEACPVDAI 117 >gi|227832792|ref|YP_002834499.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] gi|262182719|ref|ZP_06042140.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] gi|227453808|gb|ACP32561.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] Length = 347 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C + C++VCP + E + + D C CG C CP I+ + G+ L Sbjct: 120 CKHCTNAGCLDVCPTGALFRSEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVTL 177 >gi|89896541|ref|YP_520028.1| hypothetical protein DSY3795 [Desulfitobacterium hafniense Y51] gi|89335989|dbj|BAE85584.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 93 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C CK +C+ VCP + E + + C++CG C CP AI+ Sbjct: 24 IHLHNELCKSCKEKNCLLVCPAGLYSEQNGEIIVEWAGCLECGTCRAVCPQKAIE 78 >gi|320183165|gb|EFW58023.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri CDC 796-83] gi|332097171|gb|EGJ02154.1| anaerobic dimethyl sulfoxide reductase chain B domain protein [Shigella boydii 3594-74] Length = 122 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A+ Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGALNRPG 118 Query: 60 EPG 62 PG Sbjct: 119 NPG 121 >gi|225175530|ref|ZP_03729524.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168859|gb|EEG77659.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 107 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 V + C K C+ VCP D + G+ +A+ P++C DC C ECP DAI Sbjct: 9 VCDGCPHAKEAPCMRVCPGDLLTKDSSGKAAIAM-PEDCWDCAACVKECPRDAI 61 >gi|188589939|ref|YP_001920992.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43] gi|188500220|gb|ACD53356.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43] Length = 646 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 220 ITKKCIGC--GSCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 >gi|182417446|ref|ZP_02948773.1| nitroreductase family protein fused to ferredoxin domain [Clostridium butyricum 5521] gi|237665843|ref|ZP_04525831.1| 4Fe-4S binding domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378615|gb|EDT76142.1| nitroreductase family protein fused to ferredoxin domain [Clostridium butyricum 5521] gi|237658790|gb|EEP56342.1| nitroreductase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 278 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M V + CI C CV+ CPV +N I+ + C+ CG C CPV+A+ D Sbjct: 1 MFKVNKDKCIGCSQ--CVKDCPVRVISLIDNKAEINNNNCMKCGHCIAICPVNAVSTD 56 >gi|220909526|ref|YP_002484837.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 7425] gi|219866137|gb|ACL46476.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7425] Length = 75 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DCV+ CPV C + +G ++ I CIDCG+C CPV+ AI P+ L+ Sbjct: 14 ADCVDACPVACIHPGPAKNLKGTDWYWIDFATCIDCGICLQVCPVEGAIIPEERSDLQ 71 >gi|197117572|ref|YP_002137999.1| ferredoxin family protein [Geobacter bemidjiensis Bem] gi|197086932|gb|ACH38203.1| ferredoxin family protein [Geobacter bemidjiensis Bem] Length = 97 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG--- 62 E C+ C C+EVCP F E + L D C++CG C CP AI D G Sbjct: 18 ELCVGCGR--CIEVCPHQVFQLEEKRALLADRDACMECGACALNCPAAAINVDAGVGCAS 75 Query: 63 --LELWLK 68 + WL+ Sbjct: 76 GLINEWLR 83 >gi|159903401|ref|YP_001550745.1| ferredoxin [Prochlorococcus marinus str. MIT 9211] gi|159888577|gb|ABX08791.1| Ferredoxin [Prochlorococcus marinus str. MIT 9211] Length = 73 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%) Query: 15 TDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLEL 65 C + CPV+C +G N+ I + CIDCGVC CPV A+ + P L++ Sbjct: 14 ASCFQACPVECIKPGQGGNMKGTNYYYIDFNTCIDCGVCLEVCPVKGAVIAEERPDLQI 72 >gi|332295968|ref|YP_004437891.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179071|gb|AEE14760.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 259 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 C C CV+ CP ++ EN +A ++CI CG C CP Sbjct: 73 CFHCGEPACVKACPSGALFQAENGIVAFDVNKCIACGYCHSACP 116 >gi|304405134|ref|ZP_07386794.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus curdlanolyticus YK9] gi|304346013|gb|EFM11847.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus curdlanolyticus YK9] Length = 110 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 V C+ C CV VCP + F E + + D+C C +CE CPVDA+ + +P Sbjct: 5 VSASRCVSCNQ--CVSVCPTNVFDMAEGGIPVIARQDDCQTCFMCELYCPVDALYVEPDP 62 >gi|293391269|ref|ZP_06635603.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951803|gb|EFE01922.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D7S-1] Length = 205 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP + + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMQKNADGFVIVNEEICIGCRYCHMACPYDAPQFDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|157375180|ref|YP_001473780.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sediminis HAW-EB3] gi|189043390|sp|A8FUX9|RNFB_SHESH RecName: Full=Electron transport complex protein rnfB gi|157317554|gb|ABV36652.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sediminis HAW-EB3] Length = 189 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ E CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAYIREEECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|89894195|ref|YP_517682.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219668592|ref|YP_002459027.1| dimethylsulfoxide reductase subunit B [Desulfitobacterium hafniense DCB-2] gi|89333643|dbj|BAE83238.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219538852|gb|ACL20591.1| dimethylsulfoxide reductase, chain B [Desulfitobacterium hafniense DCB-2] Length = 190 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVD 53 Y ++ C C+H C E CP Y+ E + + D+CI CG C CP + Sbjct: 59 FAYWLSLGCNHCEHPKCAENCPTGAMYKREEDGIVLVDQDKCIGCGYCTWSCPYE 113 >gi|15922548|ref|NP_378217.1| NADH dehydrogenase subunit I [Sulfolobus tokodaii str. 7] gi|15623338|dbj|BAB67326.1| 169aa long hypothetical NADH-plastoquinone oxidoreductase subunit 9 [Sulfolobus tokodaii str. 7] Length = 169 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C +CP D G+ F +I+ C+ CG C CPVDA+K Sbjct: 57 MIRLYKDICIGC--TLCALICPADAMKMVTEGGKKFPSINYGRCVFCGFCVDVCPVDALK 114 >gi|315922949|ref|ZP_07919189.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. D2] gi|313696824|gb|EFS33659.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. D2] Length = 403 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Query: 17 CVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPV 52 C++VC + Y+G ++ I +C+ CG+CE CP+ Sbjct: 19 CIDVCNKNAINIVEHYDGHRYVEIDKSKCVGCGMCEQICPI 59 >gi|307546575|ref|YP_003899054.1| ferredoxin [Halomonas elongata DSM 2581] gi|307218599|emb|CBV43869.1| ferredoxin [Halomonas elongata DSM 2581] Length = 82 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/23 (73%), Positives = 18/23 (78%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP DAI P E Sbjct: 7 DECINCDVCEPECPNDAISPGEE 29 >gi|218782988|ref|YP_002434306.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764372|gb|ACL06838.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 378 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 M V TE C+ C C E C +GE+ +++ D CI CGVC CP +AI Sbjct: 308 MAVVDTEKCVSCG--TCAEKCGTQAMTQGEDGSPSLNKDLCIGCGVCAHFCPENAI 361 >gi|159905364|ref|YP_001549026.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159886857|gb|ABX01794.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 395 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI---------K 56 E CI C+ CVE CP Y GE P C CG+C CPV+AI K Sbjct: 197 EECIGCEK--CVEACPGSMIEYNGEALGVKLPVACPACGLCVESCPVEAIGLEVEYASAK 254 Query: 57 PDTEPGLELWLKINSEY 73 P T+ GL +WL+ Y Sbjct: 255 PVTDEGL-VWLEEKCAY 270 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 18/112 (16%) Query: 8 NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CV++CPV+ E + P E C+ CGVC PECPVDAI Sbjct: 90 HCVLCEK--CVDICPVEIISLPGKAEKPKKEVVIPQEPIAVTKDCVACGVCVPECPVDAI 147 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + ++ I +Q T ++ A K+ +QK K F+ N Sbjct: 148 SIEDIAVIDTDKCIYCTVCSQ----TCPWNAIFVAGKLPQKRQKTIKSFTVN 195 >gi|157164593|ref|YP_001467233.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter concisus 13826] gi|112801850|gb|EAT99194.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter concisus 13826] Length = 187 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 T + ++C++C+ CVEVCP F + + C+ C C CP DA + PD Sbjct: 51 TDFLRQSCVMCEDAPCVEVCPTGASFKTADGVTLLDHRICVSCKYCILACPYDARYVLPD 110 Query: 59 TEPG 62 E G Sbjct: 111 GEIG 114 >gi|39934299|ref|NP_946575.1| putative indolepyruvate ferredoxin oxidoreductase subunit alpha [Rhodopseudomonas palustris CGA009] gi|39648147|emb|CAE26667.1| putative indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris CGA009] Length = 608 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++T C C+ C+ + CP D ++EG + + I P CI C +C C +D IK Sbjct: 545 IITSQCTACQ--SCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIA 602 Query: 59 T 59 T Sbjct: 603 T 603 >gi|300723697|ref|YP_003713004.1| NADH dehydrogenase I subunit I, 2Fe-2S ferredoxin-related [Xenorhabdus nematophila ATCC 19061] gi|297630221|emb|CBJ90872.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Xenorhabdus nematophila ATCC 19061] Length = 180 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C + E+ F ++ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRVNFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|89901118|ref|YP_523589.1| RnfABCDGE type electron transport complex subunit B [Rhodoferax ferrireducens T118] gi|89345855|gb|ABD70058.1| electron transport complex, RnfABCDGE type, B subunit [Rhodoferax ferrireducens T118] Length = 232 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD- 58 + ++ + CI C T C+E CP D + + C C +C P CPVD IK + Sbjct: 76 VAFIDEDWCIGC--TLCIEACPTDAILGSNKLMHTVIEAYCTGCELCLPVCPVDCIKLEN 133 Query: 59 ---TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 G W + ++ A + + + S +++ ++K +P Sbjct: 134 VTKAATGWAAWSRQQADLAQIRYKLNSNRRSKDGGFRLEKPEEKSRMTAAPT 185 >gi|21227667|ref|NP_633589.1| molybdenum formylmethanofuran dehydrogenase subunit [Methanosarcina mazei Go1] gi|20906059|gb|AAM31261.1| molybdenum formylmethanofuran dehydrogenase subunit [Methanosarcina mazei Go1] Length = 346 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Query: 14 HTDCVEVCPVDCFY-----EGENFLAI--HPDECIDCGVCEPECPVDAI 55 HT C++VCP + + GE I PD CI CG C CPVDAI Sbjct: 185 HT-CIDVCPANAIFNKKAKSGERVEKITHRPDACIYCGACAVACPVDAI 232 >gi|330445943|ref|ZP_08309595.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490134|dbj|GAA04092.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 551 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 T++C LC CV VCP + + L I D C+ CG+CE CP I Sbjct: 416 TKDCTLC--MSCVAVCPTRALHAIGDRPGLLFIEED-CVQCGMCEKACPEKVI 465 >gi|269215524|ref|ZP_06159378.1| indolepyruvate ferredoxin oxidoreductase, IorA subunit [Slackia exigua ATCC 700122] gi|269131011|gb|EEZ62086.1| indolepyruvate ferredoxin oxidoreductase, IorA subunit [Slackia exigua ATCC 700122] Length = 580 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V +C CK CV++ CP F N +I P C+ C C CP I ++E Sbjct: 522 YAVKPDCRGCKM--CVQIGCPSISFDLSSNVASIDPALCVGCSQCAQVCPFSVIVKESE 578 >gi|256840652|ref|ZP_05546160.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737924|gb|EEU51250.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 301 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C CV VCP D F + GE + + CI CG C CP ++ Sbjct: 23 ESCIKC--GKCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSV 72 >gi|258513534|ref|YP_003189756.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777239|gb|ACV61133.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 443 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 T+CV+ CP + E I + CIDCG C CP A K T GLE + A Sbjct: 19 TNCVKRCPTEAIRVREGRALIIEERCIDCGECIKICPNRA-KLATTDGLEQLQNFHYTIA 77 Query: 75 TQWPNITTKKESLPSAAKMDG 95 P++ + E S ++ G Sbjct: 78 LPAPSLYAQFEPNTSPEQILG 98 >gi|198276949|ref|ZP_03209480.1| hypothetical protein BACPLE_03154 [Bacteroides plebeius DSM 17135] gi|198270474|gb|EDY94744.1| hypothetical protein BACPLE_03154 [Bacteroides plebeius DSM 17135] Length = 293 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI CK CV +CP F + + + ++ D+CI CG C CP ++I+ Sbjct: 13 HINQNTCIRCK--KCVRICPSALFTLQEDKGIEVNTDDCISCGHCVAVCPTNSIE 65 >gi|254445223|ref|ZP_05058699.1| 4Fe-4S binding domain protein [Verrucomicrobiae bacterium DG1235] gi|198259531|gb|EDY83839.1| 4Fe-4S binding domain protein [Verrucomicrobiae bacterium DG1235] Length = 527 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C+ CPVD + + + + +H D+CI C C +CP D K + G Sbjct: 110 VTSACHHCVEPACMIGCPVDAYEKDAVSGIVLHLDDQCIGCQYCVLKCPYDVPKFSPKRG 169 Query: 63 L 63 + Sbjct: 170 I 170 >gi|11497774|ref|NP_068996.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|2650484|gb|AAB91070.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 180 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 +C H D CV CPV+ Y+ E L + DE CI CG C CP A Sbjct: 56 ICNHCDNPSCVHACPVNATYKTEEGLVLIDDEICIGCGACIQACPYGA 103 >gi|56477160|ref|YP_158749.1| subunit B of a molybdenum enzyme, that of tetrathionate reductase (TTRB) [Aromatoleum aromaticum EbN1] gi|56313203|emb|CAI07848.1| subunit B of a molybdenum enzyme, similar to that of tetrathionate reductase (TTRB) [Aromatoleum aromaticum EbN1] Length = 246 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 TY++ C C CV VCPV ++ E+ + + D C+ C C CP DA Sbjct: 93 TYMLPRLCNHCDAPPCVPVCPVGATFKREDGIVVVDGDRCVGCAYCVQACPYDA 146 >gi|325474291|gb|EGC77479.1| ferredoxin [Treponema denticola F0402] Length = 58 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ C C C CPV+ E I D CI CG C CPV+AI + Sbjct: 3 MAYKISNECTNC--AACESECPVNAISEAGGKHVIDADTCISCGACAGVCPVEAISEE 58 >gi|266619158|ref|ZP_06112093.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium hathewayi DSM 13479] gi|288869304|gb|EFD01603.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium hathewayi DSM 13479] Length = 425 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ C C +VCPV EGEN ++ + C+ CGVC C V AI+ P Sbjct: 293 ERCVGCGK--CAKVCPVLAVSMEEGENGKKKAVVNKEICLGCGVCARNCAVKAIELQRRP 350 >gi|261867201|ref|YP_003255123.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412533|gb|ACX81904.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D11S-1] Length = 207 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP + + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMQKNADGFVIVNEEICIGCRYCHMACPYDAPQFDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|253688807|ref|YP_003017997.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755385|gb|ACT13461.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 223 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C H CV+VCP Y + ++PD C+ C C CP V I P T+ Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACPYQVRFIHPKTK 147 >gi|163783460|ref|ZP_02178451.1| cytochrome b/b6-like protein [Hydrogenivirga sp. 128-5-R1-1] gi|159881224|gb|EDP74737.1| cytochrome b/b6-like protein [Hydrogenivirga sp. 128-5-R1-1] Length = 651 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 16/116 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V+ + C C+ C E CP + Y E E I D+C CG+C C +A Sbjct: 297 VIEDRCEGCRQ--CFEDCPYEAIYMKRISPEEEKAYVIE-DKCAGCGICVASCNYNANVI 353 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 DT P + I E Q P + + P +A++D + Y P G NT Sbjct: 354 DTVP----YEGILKEVELQRPELLVFR--CPFSAQVDE-RNGLRVYTLPCAGALNT 402 >gi|150402891|ref|YP_001330185.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033921|gb|ABR66034.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 395 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI---------K 56 E CI C+ CVE CP Y GE P C CG+C CPV+AI K Sbjct: 197 EECIGCEK--CVEACPGSMIEYNGEALGVKLPVACPACGLCVESCPVEAISLEVEYASAK 254 Query: 57 PDTEPGLELWLKINSEY 73 P T+ GL +WL+ Y Sbjct: 255 PVTDEGL-VWLEDKCAY 270 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 18/112 (16%) Query: 8 NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CV++CP + E I P E C+ CGVC PECPVDAI Sbjct: 90 HCVLCEK--CVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAI 147 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 ++ I +Q T ++ A KM +QK K F+ N Sbjct: 148 SIKDIAVIDTDKCIYCTVCSQ----TCPWNAIFVAGKMPQKRQKTIKSFTVN 195 >gi|92115240|ref|YP_575168.1| NADH dehydrogenase subunit I [Chromohalobacter salexigens DSM 3043] gi|110287760|sp|Q1QST9|NUOI_CHRSD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91798330|gb|ABE60469.1| NADH dehydrogenase subunit I [Chromohalobacter salexigens DSM 3043] Length = 179 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +GE F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVACISLQKGERDDGRWYPEFFRINFSRCIFCGLCEEACPTSAIQ 114 Query: 57 --PDTE 60 PD E Sbjct: 115 LTPDFE 120 >gi|71892259|ref|YP_277993.1| NADH dehydrogenase subunit I [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|110287759|sp|Q492I3|NUOI_BLOPB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71796365|gb|AAZ41116.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 181 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +GE+ F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVACPVGCISLKKGESTDGRWYPKFFRINFSRCIFCGMCEEACPTAAIQ 116 Query: 57 --PDTE 60 PD E Sbjct: 117 LTPDFE 122 >gi|89893295|ref|YP_516782.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89332743|dbj|BAE82338.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 201 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C+ C VCPV ++ E + + PD+CI C C CP DA + E G+ Sbjct: 63 CNQCQDAPCQTVCPVKATHKDEGGVIVVDPDKCIGCRYCIAACPYDARFLNKETGM 118 >gi|295106206|emb|CBL03749.1| hypothetical protein [Gordonibacter pamelaeae 7-10-1-b] Length = 117 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPE 49 C+ C++ CV VCPV Y+G++ + I D CI C C P Sbjct: 53 CMQCENPPCVSVCPVQATYKGDDGIVVIDADRCIGCKYCTPR 94 >gi|295094493|emb|CBK83584.1| Coenzyme F420-reducing hydrogenase, beta subunit [Coprococcus sp. ART55/1] Length = 856 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Query: 6 TENCILCKHTD-------CVEVCPVDCF---YEGENFLA--IHPDECIDCGVCEPECP 51 ++ + C H D C VCPV+ Y+ E FLA + +C +CG+C CP Sbjct: 113 SDKTVGCIHPDYCCGCGACYSVCPVNAISMKYDSEGFLAPVVDRSKCTNCGLCRKICP 170 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Query: 35 IHPDECIDCGVCEPECPVDAI--KPDTE 60 IHPD C CG C CPV+AI K D+E Sbjct: 120 IHPDYCCGCGACYSVCPVNAISMKYDSE 147 >gi|317133605|ref|YP_004092919.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] gi|315471584|gb|ADU28188.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] Length = 482 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C CP ++ I P++C +CG C CP AI P Sbjct: 90 FSVTDACRGCIAHKCHAACPFGAISYEKHRAVIDPEKCRECGRCMKACPYHAIIERQRP 148 >gi|260913909|ref|ZP_05920383.1| tetrathionate reductase subunit B [Pasteurella dagmatis ATCC 43325] gi|260631996|gb|EEX50173.1| tetrathionate reductase subunit B [Pasteurella dagmatis ATCC 43325] Length = 245 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ ++ + I+ + CI C C CP DA Sbjct: 98 LCNHCDNPPCVPVCPVQATYQRKDGIVVINNERCIGCAYCVQACPYDA 145 >gi|269791990|ref|YP_003316894.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099625|gb|ACZ18612.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 57 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C+ CV VCP + ++PD C++CG C CPV AI Sbjct: 9 DTCVGCEA--CVGVCPTSAISMVDGKAEVNPDACVECGACVATCPVSAIS 56 >gi|258655376|ref|YP_003204532.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258558601|gb|ACV81543.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 332 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C C H C++VCP + E + I D C CG C CP ++ Sbjct: 129 CKHCTHAGCLDVCPTGALFRTEFGTVVIQADVCNGCGTCVAGCPFGVVE 177 >gi|206889463|ref|YP_002248730.1| nitrate-inducible formate dehydrogenase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741401|gb|ACI20458.1| nitrate-inducible formate dehydrogenase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 243 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKPD 58 V++ C+ C CV++CPV + + ++ D +CI C C+ CP D + D Sbjct: 70 VSQRCMHCGEPACVQICPVGALMKDKETGIVYYDKNKCIACHACKSACPFDVPRYD 125 >gi|9909124|dbj|BAB12024.1| pyruvate: NADP+ oxidoreductase [Euglena gracilis] Length = 1803 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 Y+G NF + + P++C C VC CP DA++ + N E+A + PN Sbjct: 797 YQGMNFRIQVAPEDCTGCQVCVETCPDDALEMTDAFTATPVQRTNWEFAIKVPN 850 >gi|189500792|ref|YP_001960262.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496233|gb|ACE04781.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium phaeobacteroides BS1] Length = 199 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C++T C+ CP Y+ E+ + I+ D C+ C C CP DA P Sbjct: 60 CMHCENTPCLSACPSGATYKTEDGIIRINYDRCMGCYACSIACPYDARYP 109 >gi|288559598|ref|YP_003423084.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] gi|288542308|gb|ADC46192.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] Length = 367 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E CI C C E+CP + GE + I ++C+ C VC+ CPVDAIK Sbjct: 175 EECIYCGA--CAELCPAEAIVVDKATGEESIVIDKEKCVYCLVCKKACPVDAIKA 227 >gi|261823787|ref|YP_003261893.1| oxidoreductase Fe-S binding subunit [Pectobacterium wasabiae WPP163] gi|261607800|gb|ACX90286.1| glutamate synthase, small subunit [Pectobacterium wasabiae WPP163] Length = 674 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCAGVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNP 108 >gi|238750629|ref|ZP_04612129.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] gi|238711277|gb|EEQ03495.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] Length = 205 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 59 FAYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|121535727|ref|ZP_01667530.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305692|gb|EAX46631.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 147 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/27 (51%), Positives = 19/27 (70%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDT 59 L+ HPD+CI CG+C CPV AI+ + Sbjct: 110 LSFHPDKCIVCGLCVQACPVRAIRQGS 136 >gi|93005410|ref|YP_579847.1| NADH dehydrogenase subunit I [Psychrobacter cryohalolentis K5] gi|110287769|sp|Q1QD90|NUOI_PSYCK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|92393088|gb|ABE74363.1| NADH-quinone oxidoreductase, chain I [Psychrobacter cryohalolentis K5] Length = 182 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 MTPDFEMG 125 >gi|307265661|ref|ZP_07547214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919305|gb|EFN49526.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 123 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 + CILC C VCP +C E A P ECI CGVC CP ++ Sbjct: 41 DKCILC--GICQRVCPSNCIQVNRKEGTWAFQPFECIICGVCVESCPTKSL 89 >gi|270263094|ref|ZP_06191364.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia odorifera 4Rx13] gi|270042782|gb|EFA15876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia odorifera 4Rx13] Length = 205 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ CV+VCPV+ +N + ++ C+ C +C CP AI Sbjct: 51 CRQCEDAPCVQVCPVNAITHQDNAIVLNESLCVSCKLCGIACPFGAI 97 >gi|238760425|ref|ZP_04621564.1| Electron transport complex protein rnfB [Yersinia aldovae ATCC 35236] gi|238701377|gb|EEP93955.1| Electron transport complex protein rnfB [Yersinia aldovae ATCC 35236] Length = 207 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|227503750|ref|ZP_03933799.1| possible formate dehydrogenase beta subunit [Corynebacterium striatum ATCC 6940] gi|227199574|gb|EEI79622.1| possible formate dehydrogenase beta subunit [Corynebacterium striatum ATCC 6940] Length = 352 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++ C C + C++VCP + E + + D C CG C CP I+ + G+ Sbjct: 122 SDVCKHCTNAGCLDVCPTGALFRSEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVT 181 Query: 65 L 65 L Sbjct: 182 L 182 >gi|51244627|ref|YP_064511.1| ferredoxin [Desulfotalea psychrophila LSv54] gi|50875664|emb|CAG35504.1| related to polyferredoxin [Desulfotalea psychrophila LSv54] Length = 291 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C + CP D ENF + ++C+ CGVC CP + I+ T Sbjct: 152 ECADACPFDAITMVENFPVVDSNKCVSCGVCVRTCPKNIIELQT 195 >gi|33112418|sp|Q94IN5|PNO_EUGGR RecName: Full=Pyruvate dehydrogenase [NADP+], mitochondrial; AltName: Full=Aquacobalamin reductase [NADPH]; AltName: Full=EgPNOmt; AltName: Full=Pyruvate:NADP+ oxidoreductase; Flags: Precursor gi|13872738|emb|CAC37628.1| pyruvate:NADP+ oxidoreductase [Euglena gracilis] Length = 1803 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 27 YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 Y+G NF + + P++C C VC CP DA++ + N E+A + PN Sbjct: 797 YQGMNFRIQVAPEDCTGCQVCVETCPDDALEMTDAFTATPVQRTNWEFAIKVPN 850 >gi|27904613|ref|NP_777739.1| electron transport complex protein RnfC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396891|sp|Q89AW8|RNFC_BUCBP RecName: Full=Electron transport complex protein rnfC gi|27904010|gb|AAO26844.1| electron transport complex protein RnfC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 505 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 12/57 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD----------ECIDCGVCEPECPVD 53 +NCI C C CP++ E + + H + +CI+CG+CE CP D Sbjct: 388 KNCIRC--AACSYSCPMNLLPEQLYWYSKHSNHEKTQIYNIQDCIECGICEQVCPSD 442 >gi|90422214|ref|YP_530584.1| thiamine pyrophosphate enzyme-like TPP-binding [Rhodopseudomonas palustris BisB18] gi|90104228|gb|ABD86265.1| thiamine pyrophosphate enzyme-like TPP-binding [Rhodopseudomonas palustris BisB18] Length = 606 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +VT C C+ C+ + CP D ++EG + + I P CI C +C C VD IK Sbjct: 544 IVTGQCTACQ--SCMNLGCPALTWSDQWFEGRHRVKIDPALCIGCTLCAQVCTVDCIK 599 >gi|325281676|ref|YP_004254218.1| ferredoxin-type protein [Odoribacter splanchnicus DSM 20712] gi|324313485|gb|ADY34038.1| ferredoxin-type protein [Odoribacter splanchnicus DSM 20712] Length = 505 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 13/59 (22%) Query: 5 VTENCILCKHTD------CVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPV 52 V ENCI+ +TD C E CP + G +++PD C+ CG CE CPV Sbjct: 414 VRENCIV--NTDETSCGACSEHCPTQAVTMIPYKNGLTIPSVNPDICVGCGGCEYVCPV 470 >gi|312880247|ref|ZP_07740047.1| protein of unknown function DUF362 [Aminomonas paucivorans DSM 12260] gi|310783538|gb|EFQ23936.1| protein of unknown function DUF362 [Aminomonas paucivorans DSM 12260] Length = 387 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C+ C EVCPVD ++ + + C+ C C CP A+K P L W++ Sbjct: 328 CVRCRV--CQEVCPVDAL-AWDDGPVVDSNRCVQCLCCHEMCPTGAMKAAANP-LARWVQ 383 >gi|312883748|ref|ZP_07743468.1| electron transport complex protein RnfB [Vibrio caribbenthicus ATCC BAA-2122] gi|309368598|gb|EFP96130.1| electron transport complex protein RnfB [Vibrio caribbenthicus ATCC BAA-2122] Length = 196 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|304313913|ref|YP_003849060.1| formate dehydrogenase, alpha chain [Methanothermobacter marburgensis str. Marburg] gi|302587372|gb|ADL57747.1| predicted formate dehydrogenase, alpha chain [Methanothermobacter marburgensis str. Marburg] Length = 887 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 16/73 (21%) Query: 7 ENCILCKHTDCVEVC------PVDCFYEGEN-----FLA--IHPDECIDCGVCEPECPVD 53 + CILC CV VC VD Y G + F+ I C+ CG C CPV Sbjct: 149 DKCILCG--ICVRVCRGLGAEAVDFAYRGHDTRIATFMDRDILDSSCVSCGECVEACPVG 206 Query: 54 AIKPDTE-PGLEL 65 A+ P TE P E+ Sbjct: 207 ALLPRTERPSTEV 219 >gi|302391326|ref|YP_003827146.1| electron transport complex, RnfABCDGE type, B subunit [Acetohalobium arabaticum DSM 5501] gi|302203403|gb|ADL12081.1| electron transport complex, RnfABCDGE type, B subunit [Acetohalobium arabaticum DSM 5501] Length = 423 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 22/37 (59%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CPVD +N I +ECI+CGVC CP+D I+ Sbjct: 228 CPVDAITIEDNLAVIDYEECINCGVCAEACPMDTIEA 264 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 34/72 (47%), Gaps = 22/72 (30%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGE---------NFLAIHPD---------ECIDCGVC 46 E CI C++ CVEVCP D EGE N A D EC+ CGVC Sbjct: 324 EVCIECEN--CVEVCPTDAIQSKEGETEEAEKTNSNDAAEEDDHECSIYITEECVGCGVC 381 Query: 47 EPECPVDAIKPD 58 ECPVDAI + Sbjct: 382 VEECPVDAISGE 393 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +TE C+ C CVE CPVD E I P+ CI+C C CP DAI+ E Sbjct: 292 ITEECVGCGV--CVEECPVDAISSEDGEIHNIDPEVCIECENCVEVCPTDAIQS-KEGET 348 Query: 64 ELWLKINSEYATQ 76 E K NS A + Sbjct: 349 EEAEKTNSNDAAE 361 >gi|291276488|ref|YP_003516260.1| putative ferredoxin [Helicobacter mustelae 12198] gi|290963682|emb|CBG39514.1| putative ferredoxin [Helicobacter mustelae 12198] Length = 83 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP EG+ I PD C +C C CPVDA Sbjct: 1 MSLLIDEECIACDA--CREECPNSAIEEGDPIYMIDPDLCTECVGFYDEPSCVAVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 >gi|241663771|ref|YP_002982131.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|240865798|gb|ACS63459.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 719 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 E C LC CV CP + LA+ C+ CG+CE CP AI Sbjct: 589 ERCTLC--MACVGACPSQALRDQAERPVLAMIERNCVQCGLCETTCPESAI 637 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 17 CVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV+VC + +G + + P+ C+ CG C CP AI Sbjct: 339 CVDVCSASAIASQWKDGRGSVRVTPNLCVGCGACTTACPTGAI 381 >gi|256422828|ref|YP_003123481.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] gi|256037736|gb|ACU61280.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] Length = 171 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 21/91 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E EN F I+ CI CG CE CP AI+ Sbjct: 49 ERCVGCYL--CAAACPVDCIALQATEDENGRRYPEFFRINFSRCIFCGYCEEACPTYAIQ 106 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ +EY Q ++ +KE L Sbjct: 107 --LTPDFEM-----AEYRRQ--DLVYEKEDL 128 >gi|78222455|ref|YP_384202.1| ferredoxin family protein [Geobacter metallireducens GS-15] gi|78193710|gb|ABB31477.1| Ferredoxin family protein [Geobacter metallireducens GS-15] Length = 96 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E CI C CV VCP F +G D C++CG C CPV AI+ D+ G Sbjct: 18 EACIGCGM--CVAVCPHGVFALQGNKAEMQDFDACMECGACAVNCPVGAIEVDSGVG 72 >gi|324999411|ref|ZP_08120523.1| formate dehydrogenase beta subunit [Pseudonocardia sp. P1] Length = 346 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C C H C++VCP + E + + D C CG C CP I Sbjct: 169 CKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 216 >gi|256822167|ref|YP_003146130.1| RnfABCDGE type electron transport complex subunit B [Kangiella koreensis DSM 16069] gi|256795706|gb|ACV26362.1| electron transport complex, RnfABCDGE type, B subunit [Kangiella koreensis DSM 16069] Length = 195 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGAPKLMHTVIIDECTGCDLCVEPCPVDCI 159 >gi|163744893|ref|ZP_02152253.1| 4Fe-4S binding domain protein [Oceanibulbus indolifex HEL-45] gi|161381711|gb|EDQ06120.1| 4Fe-4S binding domain protein [Oceanibulbus indolifex HEL-45] Length = 254 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCDDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGAREMDVAAGV 138 >gi|118431940|ref|NP_148720.2| molybdopterin oxidoreductase, iron-sulfur binding subunit [Aeropyrum pernix K1] gi|116063262|dbj|BAA81623.2| molybdopterin oxidoreductase, iron-sulfur binding subunit [Aeropyrum pernix K1] Length = 233 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V + C C + CV+VCPV Y E+ + + D+ CI CG C CP A Sbjct: 101 VPKQCNHCDNPSCVDVCPVKATYVNEDGIVLVDDDLCIGCGACIQNCPYGA 151 >gi|27366362|ref|NP_761890.1| electron transport complex protein RnfB [Vibrio vulnificus CMCP6] gi|37679375|ref|NP_933984.1| electron transport complex protein RnfB [Vibrio vulnificus YJ016] gi|320156873|ref|YP_004189252.1| electron transport complex protein RnfB [Vibrio vulnificus MO6-24/O] gi|33301651|sp|Q8D889|RNFB_VIBVU RecName: Full=Electron transport complex protein rnfB gi|71153697|sp|Q7MM82|RNFB_VIBVY RecName: Full=Electron transport complex protein rnfB gi|27362563|gb|AAO11417.1| Electron transport complex protein rnfB [Vibrio vulnificus CMCP6] gi|37198118|dbj|BAC93955.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Vibrio vulnificus YJ016] gi|319932185|gb|ADV87049.1| electron transport complex protein RnfB [Vibrio vulnificus MO6-24/O] Length = 198 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|323475129|gb|ADX85735.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus REY15A] gi|323477861|gb|ADX83099.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus HVE10/4] Length = 167 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C +CP D G+ F I+ C+ CG C CPVDA+K Sbjct: 54 MIRLYKDVCIGC--TLCALICPADAMKMVTQSGKKFPQINYGRCVFCGFCVDVCPVDALK 111 >gi|258542561|ref|YP_003187994.1| glutamate synthase (NADPH) small subunit [Acetobacter pasteurianus IFO 3283-01] gi|256633639|dbj|BAH99614.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636698|dbj|BAI02667.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639751|dbj|BAI05713.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642807|dbj|BAI08762.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645862|dbj|BAI11810.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648915|dbj|BAI14856.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651902|dbj|BAI17836.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654959|dbj|BAI20886.1| glutamate synthase [NADPH] small subunit [Acetobacter pasteurianus IFO 3283-12] Length = 584 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 NC C +C CP G+ + A+ D C C VC +CP AI+ D EP Sbjct: 508 NCFECD--NCYASCPEQAITRLGPGKGY-AVAMDMCTGCAVCAEQCPCHAIEMDPEP 561 >gi|254451106|ref|ZP_05064543.1| iron-sulfur cluster-binding protein [Octadecabacter antarcticus 238] gi|198265512|gb|EDY89782.1| iron-sulfur cluster-binding protein [Octadecabacter antarcticus 238] Length = 649 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 8/56 (14%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 LC H+ +C+ VCP ++I P C CG C CP AI D Sbjct: 268 LCAHSRAEKPACSNCLNVCPTGAILSAGEVVSIDPLICAGCGACSAVCPSGAISYD 323 >gi|187929661|ref|YP_001900148.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|187726551|gb|ACD27716.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] Length = 719 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 E C LC CV CP + LA+ C+ CG+CE CP AI Sbjct: 589 ERCTLC--MACVGACPSQALRDQAERPVLAMIERNCVQCGLCETTCPESAI 637 >gi|150008159|ref|YP_001302902.1| putative nitroreductase [Parabacteroides distasonis ATCC 8503] gi|255015113|ref|ZP_05287239.1| putative nitroreductase [Bacteroides sp. 2_1_7] gi|149936583|gb|ABR43280.1| putative nitroreductase [Parabacteroides distasonis ATCC 8503] Length = 286 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C CV VCP D F + GE + + CI CG C CP ++ Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSV 57 >gi|134094633|ref|YP_001099708.1| putative iron-sulfur binding protein [Herminiimonas arsenicoxydans] gi|133738536|emb|CAL61581.1| putative ferredoxin [Herminiimonas arsenicoxydans] Length = 699 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 11 LCKHTD--------CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDT 59 LC H+ C+E+C + N + ++P+ C CG C CP A+ P T Sbjct: 317 LCAHSRNGKIGCNACIEICSAEAISHNGNHVKVNPNLCAGCGACTTVCPSGAMAYAYPRT 376 Query: 60 E 60 E Sbjct: 377 E 377 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + N L C+ CG+CE CP +AI Sbjct: 570 CTLC--MSCVGACPESALTDNANAPQLRFIEKNCVQCGLCEKTCPENAI 616 >gi|91786836|ref|YP_547788.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91696061|gb|ABE42890.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 695 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV CP + L C+ CG+C CP DAI Sbjct: 560 VNTDTCTLC--LSCVSACPASALQDNPERPQLKFIEKNCVQCGLCAVTCPEDAI 611 >gi|332978350|gb|EGK15075.1| electron transport complex [Psychrobacter sp. 1501(2011)] Length = 275 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD G++ I D C C +C P CPVD I Sbjct: 113 DDCIGC--TKCIPACPVDAIVGTGKHMHTIISDLCTGCELCLPPCPVDCI 160 >gi|303244140|ref|ZP_07330478.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485525|gb|EFL48451.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 64 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 16 DCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C + CP++ F +GE + H +EC CGVCE CP A+K Sbjct: 19 ECEKNCPMEVFEIDGEKVVVAHEEECTGCGVCEDVCPTGAVK 60 >gi|227828038|ref|YP_002829818.1| NADH dehydrogenase subunit I [Sulfolobus islandicus M.14.25] gi|227830775|ref|YP_002832555.1| NADH dehydrogenase subunit I [Sulfolobus islandicus L.S.2.15] gi|229579671|ref|YP_002838070.1| NADH dehydrogenase subunit I [Sulfolobus islandicus Y.G.57.14] gi|229581663|ref|YP_002840062.1| NADH dehydrogenase subunit I [Sulfolobus islandicus Y.N.15.51] gi|229585307|ref|YP_002843809.1| NADH dehydrogenase subunit I [Sulfolobus islandicus M.16.27] gi|238620268|ref|YP_002915094.1| NADH dehydrogenase subunit I [Sulfolobus islandicus M.16.4] gi|284998289|ref|YP_003420057.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus L.D.8.5] gi|227457223|gb|ACP35910.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus L.S.2.15] gi|227459834|gb|ACP38520.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus M.14.25] gi|228010386|gb|ACP46148.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus Y.G.57.14] gi|228012379|gb|ACP48140.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus Y.N.15.51] gi|228020357|gb|ACP55764.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus M.16.27] gi|238381338|gb|ACR42426.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus M.16.4] gi|284446185|gb|ADB87687.1| NADH-quinone oxidoreductase, chain I [Sulfolobus islandicus L.D.8.5] Length = 167 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C +CP D G+ F I+ C+ CG C CPVDA+K Sbjct: 54 MIRLYKDVCIGC--TLCALICPADAMKMVTQSGKKFPQINYGRCVFCGFCVDVCPVDALK 111 >gi|116515045|ref|YP_802674.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285559|sp|Q057W8|NUOI_BUCCC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|116256899|gb|ABJ90581.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 181 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 16/68 (23%) Query: 6 TENCILCKHTDCVEVCPVDCF-----------YEGENFLAIHPDECIDCGVCEPECPVDA 54 +E C+ C C VCPV+C + ++F I+ CI CG+CE CP A Sbjct: 57 SERCVACNL--CSAVCPVNCISLKKSEEKNGRWYAKSF-QINLSRCIFCGLCEEACPTMA 113 Query: 55 IK--PDTE 60 I+ PD E Sbjct: 114 IQLTPDIE 121 >gi|291546307|emb|CBL19415.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus sp. SR1/5] Length = 340 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C C+ CP G++F I D+CI CG C+ CP DAI Sbjct: 115 YEVSNMCRGCVAHPCLLTCPKGAISMVNGKSF--IDQDKCIHCGRCKAVCPYDAIAHKER 172 Query: 61 P 61 P Sbjct: 173 P 173 >gi|281357693|ref|ZP_06244180.1| nitroreductase [Victivallis vadensis ATCC BAA-548] gi|281315950|gb|EFA99976.1| nitroreductase [Victivallis vadensis ATCC BAA-548] Length = 269 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +E CI C C++ CP GE + D+CI+CG C CP +AI Sbjct: 10 SEACIRCGF--CIDDCPTCVLEMGEAGPQVREDQCIECGHCVSVCPTEAI 57 >gi|187250942|ref|YP_001875424.1| FeFe Hydrogenase HydB [Elusimicrobium minutum Pei191] gi|186971102|gb|ACC98087.1| FeFe Hydrogenase HydB (NuoF) [Elusimicrobium minutum Pei191] Length = 620 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E C+ C T C CPV E + +H ++CI CG C C AIK D Sbjct: 567 VIEEKCVGC--TACKRACPVGAITGEVKQKHFVHQEKCIKCGQCFSACKFSAIKKD 620 >gi|91201718|emb|CAJ74778.1| strongly similar to ferredoxin [Candidatus Kuenenia stuttgartiensis] Length = 56 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + E CI C C CPV+ E + I C DCG C CPVDAI Sbjct: 1 MAHSINEECINCAA--CESECPVEAISEAGDVRVIDESTCTDCGNCVSVCPVDAI 53 >gi|38704092|ref|NP_311370.2| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|168748463|ref|ZP_02773485.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4113] gi|168756250|ref|ZP_02781257.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4401] gi|168761087|ref|ZP_02786094.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4501] gi|168768570|ref|ZP_02793577.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4486] gi|168773608|ref|ZP_02798615.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4196] gi|168778444|ref|ZP_02803451.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4076] gi|168787824|ref|ZP_02812831.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC869] gi|168798849|ref|ZP_02823856.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC508] gi|195936624|ref|ZP_03082006.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. EC4024] gi|208807942|ref|ZP_03250279.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4206] gi|208813253|ref|ZP_03254582.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4045] gi|208821290|ref|ZP_03261610.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4042] gi|209397372|ref|YP_002271950.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4115] gi|217327252|ref|ZP_03443335.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. TW14588] gi|254794426|ref|YP_003079263.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. TW14359] gi|261223086|ref|ZP_05937367.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259362|ref|ZP_05951895.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. FRIK966] gi|187770591|gb|EDU34435.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4196] gi|188017141|gb|EDU55263.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4113] gi|189003522|gb|EDU72508.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4076] gi|189356587|gb|EDU75006.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4401] gi|189362213|gb|EDU80632.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4486] gi|189368471|gb|EDU86887.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4501] gi|189372351|gb|EDU90767.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC869] gi|189378564|gb|EDU96980.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC508] gi|208727743|gb|EDZ77344.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4206] gi|208734530|gb|EDZ83217.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4045] gi|208741413|gb|EDZ89095.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4042] gi|209158772|gb|ACI36205.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4115] gi|217319619|gb|EEC28044.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. TW14588] gi|254593826|gb|ACT73187.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. TW14359] gi|320188813|gb|EFW63472.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. EC1212] gi|320640985|gb|EFX10469.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. G5101] gi|320646267|gb|EFX15194.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H- str. 493-89] gi|320651773|gb|EFX20153.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H- str. H 2687] gi|320657158|gb|EFX24967.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662764|gb|EFX30096.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320667804|gb|EFX34715.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. LSU-61] gi|326340276|gb|EGD64080.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. 1125] gi|326344961|gb|EGD68705.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. 1044] Length = 205 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ CV+VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCVQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|84490228|ref|YP_448460.1| hypothetical protein Msp_1447 [Methanosphaera stadtmanae DSM 3091] gi|84373547|gb|ABC57817.1| EhbK [Methanosphaera stadtmanae DSM 3091] Length = 451 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CVEVCP D + + ++ D+C+ C C CPV+AI P T P L +KI S Y+ Sbjct: 336 CVEVCPKDALTIEDKEVKLNFDKCVLCEKCGIYCPVNAI-PKTSP---LKMKIQSGYSMI 391 Query: 77 WPNI 80 N+ Sbjct: 392 NNNL 395 >gi|20093897|ref|NP_613744.1| ferredoxin [Methanopyrus kandleri AV19] gi|19886838|gb|AAM01674.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 252 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 21/40 (52%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVEVCPVD + I D CI CG C CP AIK Sbjct: 205 CVEVCPVDAVEMEGDVANISYDRCIRCGECARNCPTGAIK 244 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ CK C E CPVD E N + D C+ C +C CPVDAIK Sbjct: 47 ERCVGCKT--CYEECPVDALTEPDSTNPPEVDHDACVRCRLCAKSCPVDAIK 96 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 11/72 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI---KPDTEP 61 + CI C+ C ++CPV E N L I D+CI C CE CPVDAI + T P Sbjct: 133 DRCIACRL--CEQICPV----EAPNIDKLRIDEDKCIGCKACEHACPVDAIVIERTLTPP 186 Query: 62 GLELWLKINSEY 73 E ++++ + Sbjct: 187 EFEREIELDQDM 198 >gi|116623401|ref|YP_825557.1| cyclic nucleotide-binding protein [Candidatus Solibacter usitatus Ellin6076] gi|116226563|gb|ABJ85272.1| cyclic nucleotide-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 755 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 ++V +C C C+ CPV ++ + D CI CG C +CP Sbjct: 509 FLVATSCRACMDPLCMTRCPVGSIRRKDSLDIVIEDWCIGCGNCAIDCP 557 >gi|284164399|ref|YP_003402678.1| NADH-quinone oxidoreductase, chain I [Haloterrigena turkmenica DSM 5511] gi|284014054|gb|ADB60005.1| NADH-quinone oxidoreductase, chain I [Haloterrigena turkmenica DSM 5511] Length = 153 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D +GE + +H +C+ C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVTNDQRQGEQY-NLHIGQCVYCRLCEEVCPVDAI 97 >gi|242281209|ref|YP_002993338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242124103|gb|ACS81799.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 139 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHP-DECIDCGVCEPECPVDAIKPDT 59 T V + C+ C C EVCP + IH D CI CG C CPVDAI D Sbjct: 47 TGFVAKVCMACSPAPCAEVCPTGAMRGRKKGGGVIHKKDLCIRCGKCAEACPVDAIYLDL 106 Query: 60 E 60 + Sbjct: 107 K 107 >gi|237734473|ref|ZP_04564954.1| electron transport complex [Mollicutes bacterium D7] gi|229382293|gb|EEO32384.1| electron transport complex [Coprobacillus sp. D7] Length = 442 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECP 51 CI C CV+VCP+ + ENFL +H ++C++CG C CP Sbjct: 367 CIHCGR--CVDVCPIGLIPQLLYRYARTGDKENFLKVHGNDCMECGCCTFTCP 417 >gi|242309592|ref|ZP_04808747.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] gi|239523593|gb|EEQ63459.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] Length = 189 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 V +C +C+HT CV VCP F + + + I ++C+ C C CP +A + P+T+ Sbjct: 55 VRHSCEMCEHTPCVTVCPTHASFMDEDGIVDIDANKCVGCLYCVVACPYNARYVNPETK 113 >gi|149176111|ref|ZP_01854727.1| molybdopterin oxidoreductase, iron sulfur subunit [Planctomyces maris DSM 8797] gi|148844978|gb|EDL59325.1| molybdopterin oxidoreductase, iron sulfur subunit [Planctomyces maris DSM 8797] Length = 581 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--H-PDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C++ CPV+ YE + I H D+C C C CP D K ++ Sbjct: 133 VTTACHHCLDPGCMQACPVNA-YEKDPITGIVRHLDDQCFGCQYCTLACPYDVPKYHSKK 191 Query: 62 GL 63 G+ Sbjct: 192 GI 193 >gi|89897348|ref|YP_520835.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336796|dbj|BAE86391.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 175 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 ++ C+ C+ C E CPV + + E+ + + E CI CG+C CP +A K + + Sbjct: 55 LSHACMHCEKPACAEACPVKAYTKREDGIVVQDHEKCIGCGMCVSACPYEAPKLNKD 111 >gi|296186485|ref|ZP_06854888.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|296048932|gb|EFG88363.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 104 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIK 56 + CI C C++VCP Y EN A + DEC C C EC V AIK Sbjct: 8 DKCIKC--GKCIKVCPGSLIYADENKKAFIKYEDECWGCTACLKECGVSAIK 57 >gi|322419374|ref|YP_004198597.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] gi|320125761|gb|ADW13321.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] Length = 489 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV C+ C T C VCPV C + + I + CI CG C C AI Sbjct: 435 FVVAAKCVGC--TACARVCPVSCISGKAKEVHLIDQNSCIKCGACIERCKFGAI 486 >gi|257372947|ref|YP_003175721.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] gi|257167671|gb|ACV49363.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] Length = 257 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 M+Y T C C++ CV+VCPV+ Y+ E+ + I D+CI C C CP +A Sbjct: 64 MSYQPTA-CQHCENAPCVKVCPVNATYKREDGIVEIDYDKCIGCRYCMAACPYNA 117 >gi|282599783|ref|ZP_06257365.1| tetrathionate reductase complex, subunit B [Providencia rustigianii DSM 4541] gi|282567821|gb|EFB73356.1| tetrathionate reductase complex, subunit B [Providencia rustigianii DSM 4541] Length = 250 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ E+ + + +E C+ C C CP DA Sbjct: 104 LCNHCDNPPCVPVCPVQATYQREDGIVVVDNERCVGCAYCVQACPYDA 151 >gi|15803004|ref|NP_289034.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|291283701|ref|YP_003500519.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. CB9615] gi|12516866|gb|AAG57591.1|AE005478_1 hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13362813|dbj|BAB36766.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|209763668|gb|ACI80146.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763670|gb|ACI80147.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763672|gb|ACI80148.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763674|gb|ACI80149.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763676|gb|ACI80150.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|290763574|gb|ADD57535.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. CB9615] Length = 218 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ CV+VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCVQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|238786898|ref|ZP_04630699.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] gi|238725266|gb|EEQ16905.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] Length = 205 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 59 FAYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|319936847|ref|ZP_08011259.1| 4Fe-4S ferredoxin [Coprobacillus sp. 29_1] gi|319808115|gb|EFW04687.1| 4Fe-4S ferredoxin [Coprobacillus sp. 29_1] Length = 366 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + CI C C+++C D ++ +I+ D+C+ CG C CP DAIK + Sbjct: 190 VVQDLCIGCGQ--CIKICAHDAPTITDHKASINHDKCVGCGRCIGVCPKDAIKASMDEAN 247 Query: 64 ELWLKINSEY 73 ++ +EY Sbjct: 248 DILNYKIAEY 257 >gi|295106199|emb|CBL03742.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 206 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C +VCP ++ +++ D+C+ CG C CP +A K D Sbjct: 60 SYPLSLSCNHCDDPACTKVCPTGAMHKDAETGLVSVDADKCVGCGYCHMACPYNAPKVDR 119 Query: 60 EPG 62 G Sbjct: 120 SKG 122 >gi|262381260|ref|ZP_06074398.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296437|gb|EEY84367.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 286 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C CV VCP D F + GE + + CI CG C CP ++ Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSV 57 >gi|150402634|ref|YP_001329928.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033664|gb|ABR65777.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 252 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 YV T C+ C+ C EVCPV E +N I P++C+ C +C CPV AI Sbjct: 42 YVETNKCVRCEL--CYEVCPVQAITEPSVKNPAEIIPEKCVKCEICAKTCPVGAI 94 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 NC++C E+CPV + + + +CI CG CE CPV AI Sbjct: 203 NCMVCS-----EICPVGAIVYEDGSMKLDDKKCIFCGKCEKNCPVSAI 245 >gi|32266484|ref|NP_860516.1| ferredoxin [Helicobacter hepaticus ATCC 51449] gi|32262535|gb|AAP77582.1| ferredoxin [Helicobacter hepaticus ATCC 51449] Length = 83 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ CI C C E CP EG+ +I PD C +C C CPVDA Sbjct: 1 MSLMINNECIACDA--CAEECPNGAIEEGDPIYSIDPDVCTECVGSYDEPSCLSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 >gi|330997523|ref|ZP_08321371.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] gi|329570468|gb|EGG52195.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] Length = 387 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 +T+ C CV++CP C + E FL + CI CG+CE CP+ K Sbjct: 3 AITDKAKCCGCNACVQICPQKCIEMNPDSEGFLYPKTSKENCIQCGLCERVCPLGEPKSK 62 Query: 59 TEP 61 EP Sbjct: 63 REP 65 >gi|225175969|ref|ZP_03729961.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168557|gb|EEG77359.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 369 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E C +C + C++ CP D E I D+CI CG C CP AIK Sbjct: 191 VKGEGCKVC--STCLKWCPADAILIMEETAEIDHDKCIGCGECTVVCPTRAIK 241 >gi|167756755|ref|ZP_02428882.1| hypothetical protein CLORAM_02302 [Clostridium ramosum DSM 1402] gi|167702930|gb|EDS17509.1| hypothetical protein CLORAM_02302 [Clostridium ramosum DSM 1402] Length = 442 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECP 51 CI C CV+VCP+ + ENFL +H ++C++CG C CP Sbjct: 367 CIHCGR--CVDVCPIGLIPQLLYRYARTGDKENFLKVHGNDCMECGCCTFTCP 417 >gi|147920357|ref|YP_685870.1| 2(4Fe-4S) ferredoxin-domain-containing protein [uncultured methanogenic archaeon RC-I] gi|110621266|emb|CAJ36544.1| 2(4Fe-4S) ferredoxin-domain protein [uncultured methanogenic archaeon RC-I] Length = 130 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VCPVD YE + + I C+ CG C CP AI+ Sbjct: 85 CVSVCPVDAISYEHDWQVTIDKAACVQCGTCTHACPTSAIR 125 >gi|78045112|ref|YP_358958.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] gi|77997227|gb|ABB16126.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] Length = 144 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + E C CK C+E P FY+ E + ++C CG+CE CP AI+ Sbjct: 56 ITIEQCKHCKRAKCIEAYPQGALFYDEEGRVVCSEEKCTGCGLCEKACPFHAIR 109 >gi|24375838|ref|NP_719881.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] gi|24350797|gb|AAN57325.1|AE015869_1 anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] Length = 205 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C + CV+ CP Y+ + ++ D CI C C CP DA P Sbjct: 62 FAYYISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDA--PQ 119 Query: 59 TEPGLELWLK 68 +P ++ K Sbjct: 120 IDPQRKVMTK 129 >gi|301309723|ref|ZP_07215662.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|300831297|gb|EFK61928.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 286 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C CV VCP D F + GE + + CI CG C CP ++ Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSV 57 >gi|149190374|ref|ZP_01868646.1| electron transport complex protein RnfB [Vibrio shilonii AK1] gi|148835753|gb|EDL52718.1| electron transport complex protein RnfB [Vibrio shilonii AK1] Length = 193 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|71065158|ref|YP_263885.1| NADH dehydrogenase subunit I [Psychrobacter arcticus 273-4] gi|110287768|sp|Q4FU57|NUOI_PSYA2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71038143|gb|AAZ18451.1| NADH dehydrogenase I, subunit I [Psychrobacter arcticus 273-4] Length = 182 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 21/91 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ SEY Q ++ +KE L Sbjct: 118 --MTPDFEM-----SEYVRQ--DLVYEKEHL 139 >gi|14521676|ref|NP_127152.1| formate dehydrogenase iron-sulfur subunit related protein [Pyrococcus abyssi GE5] gi|5458895|emb|CAB50382.1| Oxidoreductase iron-sulfur protein [Pyrococcus abyssi GE5] Length = 164 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 NC C+ C+EVCP Y +N +A P +CI C +C CP K D Sbjct: 45 NCRHCERAPCLEVCPTGALYRDCDNAVAFDPLKCIGCLMCAVACPFGVPKLD 96 >gi|127511178|ref|YP_001092375.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636473|gb|ABO22116.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 231 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 T V C C + C +VCPV+ Y+ + + I +ECI C +C CP A + D Sbjct: 81 TLAVPNQCNQCDNPVCTQVCPVEATYKRKEDGIVVIDHEECIHCQLCVDACPYGARRKD 139 >gi|126641075|ref|YP_001084059.1| putative iron-sulfur protein [Acinetobacter baumannii ATCC 17978] Length = 181 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M ++ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 1 MKAIIREDECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 55 >gi|303256259|ref|ZP_07342275.1| ferredoxin hydrogenase [Burkholderiales bacterium 1_1_47] gi|302860988|gb|EFL84063.1| ferredoxin hydrogenase [Burkholderiales bacterium 1_1_47] Length = 450 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ +NC+ C C + CPVD G + I D C+ CG C CP AI+ Sbjct: 35 IIHINKDNCVGCD--TCRKFCPVDAISGGLGAIHKIRDDACVSCGQCLSACPFGAIE 89 >gi|294794792|ref|ZP_06759927.1| conserved domain protein [Veillonella sp. 3_1_44] gi|294454154|gb|EFG22528.1| conserved domain protein [Veillonella sp. 3_1_44] Length = 65 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG+ I CI CG C CPV A+K Sbjct: 4 LKFNIDDTCVKCGA--CAEDCPVQCITEGKTRFIIGKG-CISCGDCYSICPVGAVK 56 >gi|293609588|ref|ZP_06691890.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828040|gb|EFF86403.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 87 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITNDCINCDM--CLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IKPD Sbjct: 59 IKPD 62 >gi|257453974|ref|ZP_05619250.1| NADH-quinone oxidoreductase subunit i [Enhydrobacter aerosaccus SK60] gi|257448639|gb|EEV23606.1| NADH-quinone oxidoreductase subunit i [Enhydrobacter aerosaccus SK60] Length = 183 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 61 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 118 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 119 MTPDFELG---------EYNRQ--NLVYEKEHL 140 >gi|152990327|ref|YP_001356049.1| ferredoxin-like protein [Nitratiruptor sp. SB155-2] gi|151422188|dbj|BAF69692.1| ferredoxin-like protein [Nitratiruptor sp. SB155-2] Length = 354 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C +CP D E +AI+ D+CI+CG C CP +A+ Sbjct: 22 CEAICPADAIETKEAGVAIYQDKCIECGGCVGVCPTEAL 60 >gi|110667600|ref|YP_657411.1| NADH dehydrogenase-like complex, subunit I [Haloquadratum walsbyi DSM 16790] gi|109625347|emb|CAJ51769.1| NADH dehydrogenase-like complex, subunit I [Haloquadratum walsbyi DSM 16790] Length = 153 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C +VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CEKVCPNDTIQIVQDDKRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|331000390|ref|ZP_08324069.1| hydrogenase, Fe-only [Parasutterella excrementihominis YIT 11859] gi|329571980|gb|EGG53652.1| hydrogenase, Fe-only [Parasutterella excrementihominis YIT 11859] Length = 447 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ +NC+ C C + CPVD G + I D C+ CG C CP AI+ Sbjct: 32 IIHINKDNCVGCD--TCRKFCPVDAISGGLGAIHKIRDDACVSCGQCLSACPFGAIE 86 >gi|301027423|ref|ZP_07190760.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300394931|gb|EFJ78469.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] Length = 162 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|255523553|ref|ZP_05390521.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|255512810|gb|EET89082.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] Length = 107 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIK 56 + CI C C++VCP Y EN A + DEC C C EC V AIK Sbjct: 11 DKCIKC--GKCIKVCPGSLIYADENKKAFIKYEDECWGCTACLKECGVSAIK 60 >gi|288574064|ref|ZP_06392421.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569805|gb|EFC91362.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 354 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C CPV I D CI CG C CP AI D + + Sbjct: 192 EKCVGCGR--CFRNCPVKAISMTGGKAVIDKDVCIGCGECLTVCPASAISLDWRTDVVQF 249 Query: 67 LKINSEYA 74 + +EYA Sbjct: 250 HRRMAEYA 257 >gi|222099632|ref|YP_002534200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga neapolitana DSM 4359] gi|221572022|gb|ACM22834.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga neapolitana DSM 4359] Length = 366 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YVV E C+ C C + CPV I D+CI CG C C A+ P + Sbjct: 198 YVVEEKCVACG--TCAKFCPVGAITV-TKVARIDYDKCIGCGQCIAMCSYGAMSPKWDSS 254 Query: 63 LELWLKINSEYA 74 + K +EYA Sbjct: 255 TDSLSKKMAEYA 266 >gi|218439098|ref|YP_002377427.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7424] gi|218171826|gb|ACK70559.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7424] Length = 533 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 37 PDECIDCGVCEPECPVDAIKPD 58 PD C CG C+P+CP AI D Sbjct: 6 PDNCYSCGTCKPQCPTGAIHLD 27 >gi|147677713|ref|YP_001211928.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] gi|146273810|dbj|BAF59559.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] Length = 650 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + C V Y E + I P++C+ C C CP +AI Sbjct: 574 ERCIACGL--CAKACTVQAIYGEPKKPYRIDPEKCVKCAACVARCPRNAI 621 >gi|17547095|ref|NP_520497.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17429396|emb|CAD16083.1| putative ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 719 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + L++ C+ CG+C+ CP DAI Sbjct: 591 CTLC--MACVSACPSQALRDAAERPVLSMIERNCVQCGLCDTTCPEDAI 637 >gi|294637339|ref|ZP_06715635.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Edwardsiella tarda ATCC 23685] gi|291089496|gb|EFE22057.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Edwardsiella tarda ATCC 23685] Length = 964 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 15/90 (16%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKP-DTEPGLELWLKINSEYATQWPNITTKK 84 F E L ++P++C CG+C CPV +P TEP + ++ + P++ +K Sbjct: 738 FPETRYTLQVYPEDCTGCGLCVEACPVRHSEPGQTEPQRAISMQ------EKLPHLNAEK 791 Query: 85 ESL--------PSAAKMDGVKQKYEKYFSP 106 +L P A++D + ++ P Sbjct: 792 RALDWFEQLPWPDRARVDFSNVRGVQFLEP 821 >gi|269962089|ref|ZP_06176443.1| electron transport complex protein RnfB [Vibrio harveyi 1DA3] gi|269833173|gb|EEZ87278.1| electron transport complex protein RnfB [Vibrio harveyi 1DA3] Length = 197 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|242399111|ref|YP_002994535.1| Putative oxidoreductase, Fe-S subunit [Thermococcus sibiricus MM 739] gi|242265504|gb|ACS90186.1| Putative oxidoreductase, Fe-S subunit [Thermococcus sibiricus MM 739] Length = 183 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPG 62 V + C+ C CV+ CPVD E A+ DE CI+CG C CP + T+ G Sbjct: 62 VPQTCVQCPDYPCVKACPVDALSVNEKTGAVLVDEEKCIECGACITACPGKVPRIPTDKG 121 >gi|226329951|ref|ZP_03805469.1| hypothetical protein PROPEN_03864 [Proteus penneri ATCC 35198] gi|225200746|gb|EEG83100.1| hypothetical protein PROPEN_03864 [Proteus penneri ATCC 35198] Length = 154 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +T +C C+ CV+ CP + EG+ + + +C+ CG C CP A + + Sbjct: 70 FAYTLTISCNHCESPVCVKNCPTTAMHKREGDGIVRVDTSKCVGCGYCAWSCPYGAPQMN 129 Query: 59 TEPG 62 E G Sbjct: 130 EETG 133 >gi|871456|emb|CAA61208.1| putative alpha subunit of formate dehydrogenease [Methanothermobacter thermautotrophicus] Length = 887 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 16/73 (21%) Query: 7 ENCILCKHTDCVEVC------PVDCFYEGEN-----FLA--IHPDECIDCGVCEPECPVD 53 + CILC CV VC VD Y G + F+ I C+ CG C CPV Sbjct: 149 DKCILCG--ICVRVCRGLGAEAVDFAYRGHDTRIATFMDRDILDSSCVSCGECVEACPVG 206 Query: 54 AIKPDTE-PGLEL 65 A+ P TE P E+ Sbjct: 207 ALLPRTERPSTEV 219 >gi|42527242|ref|NP_972340.1| ferredoxin, 2(4Fe-4S) [Treponema denticola ATCC 35405] gi|41817666|gb|AAS12251.1| ferredoxin, 2(4Fe-4S) [Treponema denticola ATCC 35405] Length = 56 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ C C C CPV+ E I D CI CG C CPV+AI + Sbjct: 1 MAYKISNECTNCAA--CESECPVNAISEAGGKHVIDADTCISCGACAGVCPVEAISEE 56 >gi|54301686|ref|YP_131679.1| putative tetrathionate reductase, subunit B [Photobacterium profundum SS9] gi|46915106|emb|CAG21879.1| putative tetrathionate reductase, subunit B [Photobacterium profundum SS9] Length = 222 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV+VCPV Y+ E+ + + C+ C C CP DA Sbjct: 109 LCNHCDNPPCVKVCPVQATYQREDGIVMVDNKRCVACAYCVQACPYDA 156 >gi|293406384|ref|ZP_06650310.1| oxidoreductase [Escherichia coli FVEC1412] gi|298382120|ref|ZP_06991717.1| oxidoreductase [Escherichia coli FVEC1302] gi|291426390|gb|EFE99422.1| oxidoreductase [Escherichia coli FVEC1412] gi|298277260|gb|EFI18776.1| oxidoreductase [Escherichia coli FVEC1302] Length = 163 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 109 >gi|284161826|ref|YP_003400449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284011823|gb|ADB57776.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 81 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VVT N C + CV VC + E FL I+ D+C CG+C CP+ A+ Sbjct: 22 VVTVNRFKCAYCGACVSVCKFNANELIETFLQIYEDKCTGCGICVKVCPMGAL 74 >gi|218701594|ref|YP_002409223.1| putative oxidoreductase [Escherichia coli IAI39] gi|218371580|emb|CAR19419.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli IAI39] Length = 162 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|330999804|ref|ZP_08323509.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329573807|gb|EGG55396.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 183 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C + C+ VCP F + + + + ++C CG+C+ CP DAI Sbjct: 59 SHACMHCSNPTCLAVCPAAAFTKRPDGIVVLDRNKCTSCGLCKEACPYDAI 109 >gi|319955037|ref|YP_004166304.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulophaga algicola DSM 14237] gi|319423697|gb|ADV50806.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulophaga algicola DSM 14237] Length = 378 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + + C C + CVEVCPV ++ E+ L I D C+ C C CP D + Sbjct: 228 FYMGTQCFHCDNPPCVEVCPVQATWKEEDGLVVIDYDWCVGCRYCMAACPYDGRR 282 >gi|298376411|ref|ZP_06986366.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] gi|298266289|gb|EFI07947.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] Length = 286 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 E+CI C CV VCP D F + GE + + CI CG C CP ++ Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSV 57 >gi|284009327|emb|CBA76492.1| NADH-quinone oxidoreductase chain I [Arsenophonus nasoniae] Length = 180 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVGCISLQKAEQPDGRWYPEFFQINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|171060402|ref|YP_001792751.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170777847|gb|ACB35986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 743 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 18/60 (30%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAIK 56 T+ C +C CV CP E+ LA +P+ C+ CG+C CP DAI+ Sbjct: 606 TQRCTMC--LSCVGACP-------ESALADNPERPQLRFIEKNCVQCGLCASTCPEDAIQ 656 >gi|152971333|ref|YP_001336442.1| putative oxidoreductase Fe-S binding subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956182|gb|ABR78212.1| putative oxidoreductase, Fe-S subunit (anaerobically expressed gene) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 637 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 8 NCILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 N I C+H + CV CP D + + + + ++CI C C CP ++ P Sbjct: 29 NAITCRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFGVMQVVVTP 85 >gi|150006371|ref|YP_001301115.1| ferredoxin [Bacteroides vulgatus ATCC 8482] gi|254881723|ref|ZP_05254433.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|294776232|ref|ZP_06741717.1| ferredoxin [Bacteroides vulgatus PC510] gi|319643688|ref|ZP_07998305.1| electron transport complex protein RnfB [Bacteroides sp. 3_1_40A] gi|149934795|gb|ABR41493.1| electron transport complex protein RnfB [Bacteroides vulgatus ATCC 8482] gi|254834516|gb|EET14825.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|294449915|gb|EFG18430.1| ferredoxin [Bacteroides vulgatus PC510] gi|317384718|gb|EFV65680.1| electron transport complex protein RnfB [Bacteroides sp. 3_1_40A] Length = 317 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCP + N I P +C C CE ECP AI+ P + + Sbjct: 223 SCIGC--GKCVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 68 KINSEYATQWPNITTKKESL 87 ++ + A P + + + Sbjct: 281 EVPAGEAAAKPAVKVEASKV 300 >gi|146303090|ref|YP_001190406.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701340|gb|ABP94482.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 404 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 12 CKHTD---CVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C H D C++ CP + E + I ++CI CG C+ CP +A+ Sbjct: 59 CNHCDNPVCMKSCPAVAISKNEMGIVTIDSNKCIGCGYCQWACPYEAL 106 >gi|76801793|ref|YP_326801.1| NADH dehydrogenase-like complex, subunit I [Natronomonas pharaonis DSM 2160] gi|76557658|emb|CAI49241.1| NADH dehydrogenase-like complex, subunit I [Natronomonas pharaonis DSM 2160] Length = 153 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCP-------VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVTDDMRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|60683111|ref|YP_213255.1| putative iron hydrogenase [Bacteroides fragilis NCTC 9343] gi|60494545|emb|CAH09344.1| putative iron hydrogenase [Bacteroides fragilis NCTC 9343] Length = 489 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 112 VNYEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 >gi|332969438|gb|EGK08461.1| ferredoxin [Psychrobacter sp. 1501(2011)] Length = 82 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C VCP D YEGE+ I+PD C +C C CP+D Sbjct: 1 MALMITDECINCDV--CEPVCPNDAIYEGEDIYEINPDLCTECVGHFDEPQCVEICPIDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPHD 62 >gi|331001428|ref|ZP_08325048.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329568310|gb|EGG50121.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 238 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDA 54 ++ C C C+ VCPV + + A+ D +CI CG C CP DA Sbjct: 101 LSIGCNHCSEPACIPVCPVKAISKEAKYGAVRVDSSKCISCGACRAACPWDA 152 >gi|260773217|ref|ZP_05882133.1| electron transport complex protein RnfB [Vibrio metschnikovii CIP 69.14] gi|260612356|gb|EEX37559.1| electron transport complex protein RnfB [Vibrio metschnikovii CIP 69.14] Length = 195 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|254487223|ref|ZP_05100428.1| 4Fe-4S binding domain protein [Roseobacter sp. GAI101] gi|214044092|gb|EEB84730.1| 4Fe-4S binding domain protein [Roseobacter sp. GAI101] Length = 221 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 53 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQAAGV 111 >gi|156975236|ref|YP_001446143.1| electron transport complex protein RnfB [Vibrio harveyi ATCC BAA-1116] gi|166225088|sp|A7MVC6|RNFB_VIBHB RecName: Full=Electron transport complex protein rnfB gi|156526830|gb|ABU71916.1| hypothetical protein VIBHAR_02965 [Vibrio harveyi ATCC BAA-1116] Length = 197 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|53715176|ref|YP_101168.1| putative hydrogenase [Bacteroides fragilis YCH46] gi|253566311|ref|ZP_04843765.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767004|ref|ZP_06094833.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218041|dbj|BAD50634.1| putative hydrogenase [Bacteroides fragilis YCH46] gi|251945415|gb|EES85853.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263253381|gb|EEZ24857.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 489 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 112 VNYEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 >gi|113972005|ref|YP_735798.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|114045777|ref|YP_736327.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113886689|gb|ABI40741.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] gi|113887219|gb|ABI41270.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 219 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + C C CV+ CP ++ ++ + + CI CG C CP DA + D Sbjct: 75 FAYYTSIGCNHCSEPVCVKACPTGAMHKRKDNGLVLVESSICIGCGSCARACPYDAPQLD 134 Query: 59 TE 60 T+ Sbjct: 135 TQ 136 >gi|325288954|ref|YP_004265135.1| hypothetical protein Sgly_0777 [Syntrophobotulus glycolicus DSM 8271] gi|324964355|gb|ADY55134.1| hypothetical protein Sgly_0777 [Syntrophobotulus glycolicus DSM 8271] Length = 89 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT + +NC C C+ VCPV + L ++ + CI+CG+C +CPV + Sbjct: 1 MTIRILDNCPACGA--CLMVCPVKALAISGSKLTVN-ESCIECGLCIQQCPVQQL 52 >gi|322369190|ref|ZP_08043755.1| NADH-quinone oxidoreductase, chain I [Haladaptatus paucihalophilus DX253] gi|320550922|gb|EFW92571.1| NADH-quinone oxidoreductase, chain I [Haladaptatus paucihalophilus DX253] Length = 153 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVQDDQRNGEQY-NLHVGQCIYCRLCEEVCPVDAI 97 >gi|294793178|ref|ZP_06758324.1| conserved domain protein [Veillonella sp. 6_1_27] gi|294456123|gb|EFG24487.1| conserved domain protein [Veillonella sp. 6_1_27] Length = 65 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG+ I CI CG C CPV A+K Sbjct: 4 LKFNIDDTCVKCGA--CAEDCPVQCITEGKTRFIIGKG-CISCGDCYSICPVGAVK 56 >gi|291528206|emb|CBK93792.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale M104/1] Length = 507 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--- 59 V + N I+ + C + C +D EN A I D+C+ CG C CP AI + Sbjct: 163 VCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCPFGAIADKSQIF 222 Query: 60 ------EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G +++ + + Q+ P +T K L +A K G +E Sbjct: 223 QTIRAIQSGEKVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|291525181|emb|CBK90768.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale DSM 17629] Length = 507 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--- 59 V + N I+ + C + C +D EN A I D+C+ CG C CP AI + Sbjct: 163 VCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCPFGAIADKSQIF 222 Query: 60 ------EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G +++ + + Q+ P +T K L +A K G +E Sbjct: 223 QTIRAIQSGEKVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|288957563|ref|YP_003447904.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288909871|dbj|BAI71360.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 688 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H T C++VCP + +AI P C CG C CP A Sbjct: 280 LCAHSRSRKTGCTRCLDVCPTGAVTPNGDHVAIDPHVCAGCGSCAAVCPTGA 331 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV CP + + L+ D C+ CG+C CP I Sbjct: 521 VDVEGCTLC--LACVGACPTGALLDNADKPMLSFAQDACVQCGLCRTTCPEKVI 572 >gi|225026051|ref|ZP_03715243.1| hypothetical protein EUBHAL_00290 [Eubacterium hallii DSM 3353] gi|224956626|gb|EEG37835.1| hypothetical protein EUBHAL_00290 [Eubacterium hallii DSM 3353] Length = 304 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C+ C H C+E+CP N + I+P C C C ECP A++ + E Sbjct: 59 EKCVRCHH--CMEICPKKAITFFSNEIKINPYICNGCQKCIEECPARALQAEGE 110 >gi|221633945|ref|YP_002523171.1| putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit [Thermomicrobium roseum DSM 5159] gi|221157195|gb|ACM06322.1| putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit [Thermomicrobium roseum DSM 5159] Length = 282 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP--VDAIKP 57 ++++ C C H C+E CP E + + I D C CG C P CP V A+ P Sbjct: 94 MLSDVCKHCVHAGCMEACPTGAIIRTEFDTVVIQQDICNGCGYCVPACPFGVPALSP 150 >gi|239817035|ref|YP_002945945.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239803612|gb|ACS20679.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 713 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V ++C LC CV CP + +N L C+ CG+C CP +AI Sbjct: 579 VNKDSCTLC--LACVSACPASALQDNQNAPQLRFIEKNCVQCGLCATTCPENAI 630 >gi|213861424|ref|ZP_03385894.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 133 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|212705024|ref|ZP_03313152.1| hypothetical protein DESPIG_03092 [Desulfovibrio piger ATCC 29098] gi|212671576|gb|EEB32059.1| hypothetical protein DESPIG_03092 [Desulfovibrio piger ATCC 29098] Length = 480 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ C C C+ C I P++C +CG+C CP AI Sbjct: 116 YYVTDACQGCVARSCIGSCRFGAISFSRGRSTIDPEKCRNCGMCMDACPYHAI 168 >gi|158320132|ref|YP_001512639.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140331|gb|ABW18643.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 226 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 5 VTENCI--LCKHTD---CVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK 56 VT N I LC H D CV CP++ Y+ +N + +H E CI C CE CP I Sbjct: 49 VTYNYISTLCNHCDDAPCVNACPLNPKAMYKSDNGITMHNHEACIGCRACEKACPYSVIS 108 Query: 57 -PDTEP 61 +TEP Sbjct: 109 FNETEP 114 >gi|15897266|ref|NP_341871.1| NADH dehydrogenase subunit I [Sulfolobus solfataricus P2] gi|13813471|gb|AAK40661.1| NADH dehydrogenase subunit I (NuoI) [Sulfolobus solfataricus P2] Length = 188 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C +CP D G+ F I+ C+ CG C CPVDA+K Sbjct: 75 MIRLYKDVCIGC--TLCALICPADAMKMVTESGKKFPQINYGRCVFCGFCVDVCPVDALK 132 >gi|284161789|ref|YP_003400412.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284011786|gb|ADB57739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 185 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C+ C CV+VCP+ Y+ E+ + + D CI CG C CP A Sbjct: 56 CLHCNDPLCVKVCPMKAVYKREDGIVLVDKDRCIGCGYCAFACPFGA 102 >gi|262373368|ref|ZP_06066647.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter junii SH205] gi|262313393|gb|EEY94478.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter junii SH205] Length = 180 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 21/91 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESL 87 P EL +EY Q ++ +KE+L Sbjct: 116 --MTPDFEL-----AEYVRQ--DLVYEKENL 137 >gi|261340669|ref|ZP_05968527.1| NADH-quinone oxidoreductase subunit I [Enterobacter cancerogenus ATCC 35316] gi|296103962|ref|YP_003614108.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288317083|gb|EFC56021.1| NADH-quinone oxidoreductase subunit I [Enterobacter cancerogenus ATCC 35316] gi|295058421|gb|ADF63159.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295098080|emb|CBK87170.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 180 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 +E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 SERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFELG 123 >gi|193214169|ref|YP_001995368.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087646|gb|ACF12921.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 81 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE+CI C CV+ CP + E+ AI+PD C +C C CP +A Sbjct: 1 MALYITEDCISCGV--CVDECPNNAIDYAESGYAINPDLCTECVGDFDAPQCMENCPSEA 58 Query: 55 IKPD 58 I+PD Sbjct: 59 IQPD 62 >gi|153003731|ref|YP_001378056.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027304|gb|ABS25072.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 309 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C+ C+E CP E + + PD C CG C CP I+ E G Sbjct: 124 MMSDVCKHCERAGCLEACPTGAIVRTEFGSVYVQPDVCNGCGYCVSACPFGVIERREEDG 183 >gi|325122853|gb|ADY82376.1| ferredoxin [Acinetobacter calcoaceticus PHEA-2] Length = 87 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITNDCINCDM--CLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IKPD Sbjct: 59 IKPD 62 >gi|326402523|ref|YP_004282604.1| polysulfide reductase chain B [Acidiphilium multivorum AIU301] gi|325049384|dbj|BAJ79722.1| polysulfide reductase chain B [Acidiphilium multivorum AIU301] Length = 180 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA 54 +E C C H CV+ CP ++ G N + + C C C CP D+ Sbjct: 55 SERCNHCSHATCVDACPTGASQYWNGSNIVVVDATRCTGCKACIAACPYDS 105 >gi|253999507|ref|YP_003051570.1| RnfABCDGE type electron transport complex subunit B [Methylovorus sp. SIP3-4] gi|253986186|gb|ACT51043.1| electron transport complex, RnfABCDGE type, B subunit [Methylovorus sp. SIP3-4] Length = 299 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 112 VAFIDEQTCIGC--TLCIQACPVDAILGASKQMHTVIADECTGCELCIAPCPVDCI 165 >gi|260588646|ref|ZP_05854559.1| Fe-hydrogenase large subunit family protein [Blautia hansenii DSM 20583] gi|331082003|ref|ZP_08331131.1| hypothetical protein HMPREF0992_00055 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541121|gb|EEX21690.1| Fe-hydrogenase large subunit family protein [Blautia hansenii DSM 20583] gi|330405598|gb|EGG85128.1| hypothetical protein HMPREF0992_00055 [Lachnospiraceae bacterium 6_1_63FAA] Length = 501 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C E+CP + I ++CI CG C+ CP DAI P Sbjct: 115 YEVSNMCRGCVAHPCKEICPKGAISIIKGKSVIDQEKCIKCGKCKSVCPYDAIAKKERP 173 >gi|218706392|ref|YP_002413911.1| putative oxidoreductase [Escherichia coli UMN026] gi|300896220|ref|ZP_07114769.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300936168|ref|ZP_07151104.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|218433489|emb|CAR14392.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli UMN026] gi|300359954|gb|EFJ75824.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300458625|gb|EFK22118.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 162 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|94269697|ref|ZP_01291536.1| Electron-transferring-flavoprotein dehydrogenase [delta proteobacterium MLMS-1] gi|93451112|gb|EAT02047.1| Electron-transferring-flavoprotein dehydrogenase [delta proteobacterium MLMS-1] Length = 553 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 + E C C+ CP + + GE +P C+ C C+ +CP D I+ Sbjct: 485 ICREQCRAKYGAPCITFCPAGVYEQIGEQPRPANPSNCLHCKTCQRKCPYDNIR 538 >gi|33600231|ref|NP_887791.1| tetrathionate reductase subunit B [Bordetella bronchiseptica RB50] gi|33567829|emb|CAE31743.1| tetrathionate reductase subunit B [Bordetella bronchiseptica RB50] Length = 257 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + +E C+ CG C CP DA Sbjct: 112 LCNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDA 159 >gi|85706216|ref|ZP_01037311.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85669380|gb|EAQ24246.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 260 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDAAEGV 144 >gi|304312247|ref|YP_003811845.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] gi|301797980|emb|CBL46202.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] Length = 175 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCP C +GE F I+ CI CG+CE CP AI+ Sbjct: 53 ERCVACNL--CASVCPPACISLQKGEREDGRWYPVFFRINFSRCIMCGMCEEACPTYAIQ 110 Query: 57 --PDTEPG 62 PD E G Sbjct: 111 LTPDFEMG 118 >gi|298481197|ref|ZP_06999391.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] gi|298272771|gb|EFI14338.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] Length = 392 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 12 CKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 C T C +CP C EG + ++ + CI+CG+CE CP+ Sbjct: 11 CGCTACFSICPKHCVEMKMDEEGFFYPFVNGNICIECGLCEKVCPI 56 >gi|258405760|ref|YP_003198502.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797987|gb|ACV68924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 524 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E+C C C + CPV +G A+ EC++CG+C +CP + I Sbjct: 218 VGEHCTHCGR--CAQQCPVGIGEDG----AVAAGECLNCGLCVAQCPEEVI 262 >gi|226953545|ref|ZP_03824009.1| NADH dehydrogenase subunit I [Acinetobacter sp. ATCC 27244] gi|294649467|ref|ZP_06726891.1| NADH-quinone oxidoreductase subunit I [Acinetobacter haemolyticus ATCC 19194] gi|226835723|gb|EEH68106.1| NADH dehydrogenase subunit I [Acinetobacter sp. ATCC 27244] gi|292824637|gb|EFF83416.1| NADH-quinone oxidoreductase subunit I [Acinetobacter haemolyticus ATCC 19194] Length = 180 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 21/91 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESL 87 P EL +EY Q ++ +KE+L Sbjct: 116 --MTPDFEL-----AEYVRQ--DLVYEKENL 137 >gi|223985321|ref|ZP_03635396.1| hypothetical protein HOLDEFILI_02702 [Holdemania filiformis DSM 12042] gi|223962708|gb|EEF67145.1| hypothetical protein HOLDEFILI_02702 [Holdemania filiformis DSM 12042] Length = 202 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 N I+ C + CPVD EN +A I +CI+CG C+ CP AI Sbjct: 153 NAIVVTERPCSQHCPVDAIRWDENGIAQIDETKCINCGACQAACPFGAI 201 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +T+NC C C+ C D G + I +C +CG C CP +AI P Sbjct: 105 ITDNCRKCMAKACLASCKFDAISMGLHRAQIDYTKCKECGACARSCPYNAIVVTERP 161 >gi|126460291|ref|YP_001056569.1| putative ATPase RIL [Pyrobaculum calidifontis JCM 11548] gi|126250012|gb|ABO09103.1| ABC transporter related [Pyrobaculum calidifontis JCM 11548] Length = 589 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 12 CKHTDCVEVCPVD----CFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 C H +CV+ CPV+ Y E I CI CG+C +CP DAI Sbjct: 17 CGH-ECVKYCPVNKSGKVVYIDEQLKKAVISEALCIGCGICVHKCPFDAI 65 >gi|114706714|ref|ZP_01439614.1| putative ferredoxin [Fulvimarina pelagi HTCC2506] gi|114537662|gb|EAU40786.1| putative ferredoxin [Fulvimarina pelagi HTCC2506] Length = 679 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 18/56 (32%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 C LC CV CPVD L +PD+ C+ CG+C CP +AI Sbjct: 521 CTLC--MACVSACPVDA-------LRANPDKPQLRFVESACVQCGICSATCPENAI 567 >gi|86147960|ref|ZP_01066264.1| electron transport complex protein RnfB [Vibrio sp. MED222] gi|85834285|gb|EAQ52439.1| electron transport complex protein RnfB [Vibrio sp. MED222] Length = 197 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|84393395|ref|ZP_00992154.1| electron transport complex protein RnfB [Vibrio splendidus 12B01] gi|148977611|ref|ZP_01814187.1| electron transport complex protein RnfB [Vibrionales bacterium SWAT-3] gi|218708973|ref|YP_002416594.1| electron transport complex protein RnfB [Vibrio splendidus LGP32] gi|254807928|sp|B7VLT8|RNFB_VIBSL RecName: Full=Electron transport complex protein rnfB gi|84376004|gb|EAP92893.1| electron transport complex protein RnfB [Vibrio splendidus 12B01] gi|145963126|gb|EDK28394.1| electron transport complex protein RnfB [Vibrionales bacterium SWAT-3] gi|218321992|emb|CAV18005.1| Electron transport complex protein rnfB [Vibrio splendidus LGP32] Length = 197 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|323700506|ref|ZP_08112418.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323460438|gb|EGB16303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 185 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK 56 ++ +C C++ C+ VCPV+ + + E+ + +H E CI CG C CP A K Sbjct: 55 LSLSCNHCENPACLNVCPVEAYTKREDGVVVHHQEKCIGCGNCIRSCPYGAPK 107 >gi|310657519|ref|YP_003935240.1| thiamine pyrophosphate protein domain-containing protein [Clostridium sticklandii DSM 519] gi|308824297|emb|CBH20335.1| Thiamine pyrophosphate protein domain protein TPP-binding [Clostridium sticklandii] Length = 593 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T+ CI CK C+ CP F + +I PD C+ C VC CPV AI Sbjct: 538 VDTDKCIGCKA--CIRTGCPAISFDKDNKKSSISPDSCVGCEVCLQVCPVKAI 588 >gi|282900998|ref|ZP_06308931.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] gi|281194089|gb|EFA69053.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] Length = 108 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDA--I 55 M +++E+ CI C CV+VCP + F + E + +C C +CE CPVDA + Sbjct: 1 MIELISESACIQCNI--CVKVCPTNVFDKVEEGIPKIGRQSDCQTCFMCELYCPVDALYV 58 Query: 56 KPDTEPGLEL---WLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 PD EP ++ LK + + NI + SL S AK D Q Sbjct: 59 APDVEPLGKIDEQSLKEAALLGSYRKNIGWGR-SLSSTAKEDSTYQ 103 >gi|238923605|ref|YP_002937121.1| Fe-hydrogenase large subunit family protein [Eubacterium rectale ATCC 33656] gi|238875280|gb|ACR74987.1| Fe-hydrogenase large subunit family protein [Eubacterium rectale ATCC 33656] Length = 530 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--- 59 V + N I+ + C + C +D EN A I D+C+ CG C CP AI + Sbjct: 186 VCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCPFGAIADKSQIF 245 Query: 60 ------EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G +++ + + Q+ P +T K L +A K G +E Sbjct: 246 QTIRAIQSGEKVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 292 >gi|153005757|ref|YP_001380082.1| electron-transferring-flavoprotein dehydrogenase [Anaeromyxobacter sp. Fw109-5] gi|152029330|gb|ABS27098.1| Electron-transferring-flavoprotein dehydrogenase [Anaeromyxobacter sp. Fw109-5] Length = 606 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPEC 50 +T+ E C C CVE+C + GE+ + ++C+ CG C C Sbjct: 530 VTFRSAETCRACGRRACVEICSAEALRPGEDGVPGFDREKCVHCGACLWSC 580 >gi|83590257|ref|YP_430266.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573171|gb|ABC19723.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 56 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C EVCP + E + + PDEC++CG C ECP +AI D Sbjct: 16 CAEVCPAEAITLNEVAI-VDPDECLECGACVDECPNEAISLD 56 >gi|125972947|ref|YP_001036857.1| putative PAS/PAC sensor protein [Clostridium thermocellum ATCC 27405] gi|256005703|ref|ZP_05430659.1| putative PAS/PAC sensor protein [Clostridium thermocellum DSM 2360] gi|281417158|ref|ZP_06248178.1| putative PAS/PAC sensor protein [Clostridium thermocellum JW20] gi|125713172|gb|ABN51664.1| putative PAS/PAC sensor protein [Clostridium thermocellum ATCC 27405] gi|255990334|gb|EEU00460.1| putative PAS/PAC sensor protein [Clostridium thermocellum DSM 2360] gi|281408560|gb|EFB38818.1| putative PAS/PAC sensor protein [Clostridium thermocellum JW20] gi|316940817|gb|ADU74851.1| putative PAS/PAC sensor protein [Clostridium thermocellum DSM 1313] Length = 556 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CPV + I DEC+ CG C CP +A I+ D E +L LK + YA Sbjct: 18 CIRHCPVKSLKFTDGQAHIVRDECVLCGECYVVCPQNAKQIRSDVEKAKQLVLKYDV-YA 76 Query: 75 TQWPNITT 82 + P+ Sbjct: 77 SIAPSFVA 84 >gi|323188717|gb|EFZ74002.1| hydrogenase-4 component A [Escherichia coli RN587/1] Length = 162 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIAASGENP 161 >gi|268610343|ref|ZP_06144070.1| hypothetical protein RflaF_12691 [Ruminococcus flavefaciens FD-1] Length = 205 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++CI C C+ CP C E + I + C+ CG C CPV A+ Sbjct: 153 YFVTDDCIRCGS--CLSDCPQSCI-ELKEKAVIRQENCLHCGNCAAVCPVGAV 202 >gi|222054905|ref|YP_002537267.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] gi|221564194|gb|ACM20166.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] Length = 442 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 V+ CI C C CPVD E I+PD+CI C C CP AI+ Sbjct: 18 VLEGKCIACG-ARCQSSCPVDAIEMNEAGEPVINPDKCIGCVKCVKVCPAQAIE 70 >gi|33595708|ref|NP_883351.1| tetrathionate reductase subunit B [Bordetella parapertussis 12822] gi|33565787|emb|CAE36331.1| tetrathionate reductase subunit B [Bordetella parapertussis] Length = 257 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + +E C+ CG C CP DA Sbjct: 112 LCNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDA 159 >gi|255526337|ref|ZP_05393252.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296187010|ref|ZP_06855410.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255509985|gb|EET86310.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296048448|gb|EFG87882.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 327 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 28/52 (53%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+EVC + E+ + I ++C CG+C+ +CP A+ D ++L K Sbjct: 36 CMEVCKYEAITSSEDEIKIDNEKCKKCGLCKAQCPSQAVTIDNFGEIDLLKK 87 >gi|33151623|ref|NP_872976.1| electron transport complex protein RnfC [Haemophilus ducreyi 35000HP] gi|71153698|sp|Q7VNT4|RNFC_HAEDU RecName: Full=Electron transport complex protein rnfC gi|33147844|gb|AAP95365.1| putative iron-sulfur binding NADH dehydrogenase [Haemophilus ducreyi 35000HP] Length = 702 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCPVDC-------FYEGENF---LAIHPDECIDCGVCEPECP 51 NCI C ++C + CPV F E+ + H D CI+CGVC CP Sbjct: 384 NCIRC--SNCSDACPVSLLPQQLYWFARAEDHQKSMEYHLDACIECGVCAYVCP 435 >gi|311278762|ref|YP_003940993.1| NADH-quinone oxidoreductase, chain I [Enterobacter cloacae SCF1] gi|308747957|gb|ADO47709.1| NADH-quinone oxidoreductase, chain I [Enterobacter cloacae SCF1] Length = 180 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 +E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 SERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFELG 123 >gi|307596268|ref|YP_003902585.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551469|gb|ADN51534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 263 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C C++ CV VCP Y+ + + I+ + CI C CE CP I D Sbjct: 70 TFSVPISCFHCRNPACVTVCPTGAIYKRKEDGVVVINYEVCIGCRYCENACPYGNIIFDP 129 Query: 60 EPGLE 64 G+ Sbjct: 130 VEGVS 134 >gi|303243653|ref|ZP_07329994.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485895|gb|EFL48818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 256 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI-KPDTEPGLELW 66 E ++ + P CI CG+C ECPVDAI KP E+ Sbjct: 37 SERYIYVFPKRCIRCGLCYEECPVDAITKPSIRKPAEII 75 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C CV+ CPV+ E + + I+ CI CG CE CPV AI Sbjct: 198 NDTCIKC--LSCVDECPVNAIKEIKEGVEINKSSCIFCGRCEKVCPVHAI 245 >gi|150399562|ref|YP_001323329.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012265|gb|ABR54717.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 140 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 28/48 (58%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C+ CP D + ++ + ++P++CI C +C CPV AI Sbjct: 34 RCMHCEDAPCIFACPKDAITKIDDKVVLNPEKCIGCALCIEACPVGAI 81 >gi|320195003|gb|EFW69632.1| putative oxidoreductase, Fe-S subunit [Escherichia coli WV_060327] Length = 162 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIAASGENP 161 >gi|238895928|ref|YP_002920664.1| putative oxidoreductase Fe-S binding subunit [Klebsiella pneumoniae NTUH-K2044] gi|238548246|dbj|BAH64597.1| putative oxidoreductase Fe-S subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 660 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 8 NCILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 N I C+H + CV CP D + + + + ++CI C C CP ++ P Sbjct: 52 NAITCRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFGVMQVVVTP 108 >gi|257784216|ref|YP_003179433.1| Ferredoxin hydrogenase [Atopobium parvulum DSM 20469] gi|257472723|gb|ACV50842.1| Ferredoxin hydrogenase [Atopobium parvulum DSM 20469] Length = 531 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C E+CP + + I ++CI CG+C CP AI P Sbjct: 122 VYRVTNACQGCLAHPCREICPKEAISFVDKKAYIDQEKCIQCGMCFKVCPYQAIHHHVRP 181 >gi|90409769|ref|ZP_01217786.1| tetrathionate reductase, subunit B [Photobacterium profundum 3TCK] gi|90329122|gb|EAS45379.1| tetrathionate reductase, subunit B [Photobacterium profundum 3TCK] Length = 262 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV+VCPV Y+ E+ + + C+ C C CP DA Sbjct: 116 LCNHCDNPPCVKVCPVQATYQREDGIVMVDNKRCVACAYCVQACPYDA 163 >gi|307153522|ref|YP_003888906.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7822] gi|306983750|gb|ADN15631.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7822] Length = 533 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 37 PDECIDCGVCEPECPVDAIKPD 58 PD C CG C+P+CP AI D Sbjct: 6 PDNCFGCGTCQPQCPTGAIHVD 27 >gi|118431333|ref|NP_147723.2| putative ATPase RIL [Aeropyrum pernix K1] gi|116062656|dbj|BAA80104.2| ABCE1 homolog [Aeropyrum pernix K1] Length = 614 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 9/49 (18%) Query: 16 DCVEVCPVDCFYEGENFLA---------IHPDECIDCGVCEPECPVDAI 55 +C+ VCPV+ G A I+ D CI C +C CP DAI Sbjct: 25 ECIAVCPVNKSGRGVAIDADMASRGKPVIYEDACIGCALCVKACPFDAI 73 >gi|73541017|ref|YP_295537.1| benzoyl-CoA oxygenase, component A [Ralstonia eutropha JMP134] gi|72118430|gb|AAZ60693.1| benzoyl-CoA oxygenase, component A [Ralstonia eutropha JMP134] Length = 417 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D E + D C C C CP AI Sbjct: 15 EICIRC--NTCEDTCPIDAITHDERNYVVKADVCNACNACLSPCPTGAI 61 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHD 35 >gi|309776013|ref|ZP_07671005.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916295|gb|EFP62043.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 3_1_53] Length = 202 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + + + C+ C C+ CP C G+ ++ + + C+ CG+C CPV AI T Sbjct: 149 FQILDACVQC--GSCLRSCPQQCIETGQPYIIVQKN-CLHCGLCAEVCPVHAILKRT 202 >gi|257064912|ref|YP_003144584.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792565|gb|ACV23235.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 T C C + CVEVCP ++ + I+ D+CI CG C CP D + Sbjct: 64 TMACQHCSNPACVEVCPTGASWKDTETGLVLINSDDCIGCGACLNACPYDVRR 116 >gi|226941761|ref|YP_002796835.1| ferredoxin [Laribacter hongkongensis HLHK9] gi|226716688|gb|ACO75826.1| Probable ferredoxin [Laribacter hongkongensis HLHK9] Length = 813 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELW 66 D CI+CG CEP CP + + + LW Sbjct: 542 DRCIECGFCEPACPSNGLSLTPRQRIVLW 570 >gi|212223165|ref|YP_002306401.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus onnurineus NA1] gi|212008122|gb|ACJ15504.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus onnurineus NA1] Length = 638 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 27/59 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VV E C CK + CP + N + I C CGVC CP DAIK +E G Sbjct: 578 VVEEKCTGCKACILLTGCPALVYDPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELG 636 >gi|165977109|ref|YP_001652702.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307246598|ref|ZP_07528669.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165877210|gb|ABY70258.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306852470|gb|EFM84704.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 205 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ + F+ ++ + CI C C CP DA + Sbjct: 59 FAYYMSISCNHCDDPACVKVCPTGAMHKNADGFVIVNEETCIGCRYCSMACPYDAPQYSA 118 Query: 60 EPG 62 G Sbjct: 119 SKG 121 >gi|89893347|ref|YP_516834.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89332795|dbj|BAE82390.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 190 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA--IKPDT 59 + ++ C C + +C+ VCP + + + + +H PD+C C C CP A I P T Sbjct: 60 FFLSTACNHCANPECLRVCPYGAYAKRRDGIVLHFPDKCGSCKSCVASCPFGAPQINPQT 119 >gi|34556567|ref|NP_906382.1| hypothetical protein WS0117 [Wolinella succinogenes DSM 1740] gi|400894|sp|P31076|PSRB_WOLSU RecName: Full=Polysulfide reductase chain B; AltName: Full=Sulfur reductase chain B gi|48527|emb|CAA46177.1| psrB [Wolinella succinogenes] gi|34482281|emb|CAE09282.1| NRFC [Wolinella succinogenes] Length = 191 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 ++C+ C++T CV VCP Y E+ ++++ D C+ C C CP A Sbjct: 59 QSCVQCENTPCVSVCPTKASYVNEDGIVSVNVDLCVGCLYCIAACPYQA 107 >gi|301164623|emb|CBW24182.1| putative iron hydrogenase [Bacteroides fragilis 638R] Length = 489 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 112 VNYEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 >gi|262042086|ref|ZP_06015262.1| glutamate synthase subunit small chain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330013592|ref|ZP_08307680.1| putative oxidoreductase Fe-S binding subunit [Klebsiella sp. MS 92-3] gi|259040567|gb|EEW41662.1| glutamate synthase subunit small chain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328533471|gb|EGF60204.1| putative oxidoreductase Fe-S binding subunit [Klebsiella sp. MS 92-3] Length = 660 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 8 NCILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 N I C+H + CV CP D + + + + ++CI C C CP ++ P Sbjct: 52 NAITCRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFGVMQVVVTP 108 >gi|289582897|ref|YP_003481363.1| NADH-quinone oxidoreductase, chain I [Natrialba magadii ATCC 43099] gi|289532450|gb|ADD06801.1| NADH-quinone oxidoreductase, chain I [Natrialba magadii ATCC 43099] Length = 153 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVMDDKRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|254509402|ref|ZP_05121485.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 16] gi|219547676|gb|EED24718.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 16] Length = 193 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|218962108|ref|YP_001741883.1| putative iron-sulfur cluster-binding protein [Candidatus Cloacamonas acidaminovorans] gi|167730765|emb|CAO81677.1| putative iron-sulfur cluster-binding protein [Candidatus Cloacamonas acidaminovorans] Length = 374 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E C C CV+ CPV ++ + IH ++CI C C CP AI Sbjct: 313 VSERCKQCG--ICVKSCPVKAISWQNDTKPYIHKEQCIKCLCCHELCPYQAI 362 >gi|163802833|ref|ZP_02196722.1| electron transport complex protein RnfB [Vibrio sp. AND4] gi|159173373|gb|EDP58196.1| electron transport complex protein RnfB [Vibrio sp. AND4] Length = 197 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVSPCPTDCIE 160 >gi|331648630|ref|ZP_08349718.1| putative electron transport protein YgfS [Escherichia coli M605] gi|331042377|gb|EGI14519.1| putative electron transport protein YgfS [Escherichia coli M605] Length = 163 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 115 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 116 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIAASGENP 162 >gi|329115318|ref|ZP_08244072.1| Putative oxidoreductase YeiT [Acetobacter pomorum DM001] gi|326695297|gb|EGE46984.1| Putative oxidoreductase YeiT [Acetobacter pomorum DM001] Length = 605 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 NC C +C CP G+ + A+ D C C VC +CP AI+ D EP Sbjct: 529 NCFECD--NCYASCPEQAITRLGPGKGY-AVSMDLCTGCAVCAEQCPCHAIEMDPEP 582 >gi|323498080|ref|ZP_08103085.1| electron transport complex protein RnfB [Vibrio sinaloensis DSM 21326] gi|323316860|gb|EGA69866.1| electron transport complex protein RnfB [Vibrio sinaloensis DSM 21326] Length = 193 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|170726903|ref|YP_001760929.1| electron transport complex protein RnfB [Shewanella woodyi ATCC 51908] gi|169812250|gb|ACA86834.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella woodyi ATCC 51908] Length = 189 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGTGKQMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|149909449|ref|ZP_01898104.1| oxidoreductase [Moritella sp. PE36] gi|149807559|gb|EDM67508.1| oxidoreductase [Moritella sp. PE36] Length = 633 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 C H D C++ CP + + + A+ PD C CG C CP +A P +P Sbjct: 145 CNHCDDPVCLKGCPTKAYTKHVEYGAVLQDPDTCFGCGYCTWVCPYNA--PQLDP 197 >gi|37680406|ref|NP_935015.1| tetrathionate reductase, subunit B [Vibrio vulnificus YJ016] gi|37199153|dbj|BAC94986.1| tetrathionate reductase, subunit B [Vibrio vulnificus YJ016] Length = 255 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATYQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|327399634|ref|YP_004340503.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Hippea maritima DSM 10411] gi|327182263|gb|AEA34444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Hippea maritima DSM 10411] Length = 146 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Query: 10 ILCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++C+H D C+E C + E ++ ++PD C+ C +C CP IK DT E Sbjct: 57 VMCRHCDDAPCMEACQNGSMHRDERGYVVVNPDTCVGCWMCVMACPYGVIKTDTR--REA 114 Query: 66 W 66 W Sbjct: 115 W 115 >gi|323492347|ref|ZP_08097500.1| electron transport complex protein RnfB [Vibrio brasiliensis LMG 20546] gi|323313394|gb|EGA66505.1| electron transport complex protein RnfB [Vibrio brasiliensis LMG 20546] Length = 194 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|212223691|ref|YP_002306927.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] gi|212008648|gb|ACJ16030.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] Length = 168 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECP 51 NC C+ C++VCP Y + + + I+PD+CI C +C CP Sbjct: 47 NCRHCERAPCMDVCPAGAIYRDSDGAIIINPDKCIGCYMCLAVCP 91 >gi|148653804|ref|YP_001280897.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572888|gb|ABQ94947.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Psychrobacter sp. PRwf-1] Length = 83 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C VCP D YEGE I+PD C +C C CP+D Sbjct: 1 MALMITDECINCDV--CEPVCPNDAIYEGEEIYEINPDLCTECVGHFDEPQCVEICPIDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPND 62 >gi|15789837|ref|NP_279661.1| NADH dehydrogenase/oxidoreductase-like protein [Halobacterium sp. NRC-1] gi|169235558|ref|YP_001688758.1| NADH dehydrogenase-like complex subunit I [Halobacterium salinarum R1] gi|10580231|gb|AAG19141.1| NADH dehydrogenase/oxidoreductase-like protein [Halobacterium sp. NRC-1] gi|167726624|emb|CAP13409.1| NADH dehydrogenase-like complex subunit I [Halobacterium salinarum R1] Length = 153 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVTDNQRNGEQY-NLHVGQCIYCRLCEEVCPVDAI 97 >gi|148263632|ref|YP_001230338.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146397132|gb|ABQ25765.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 431 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Query: 17 CVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CV CPV D I + C+ CGVC CPV AI+ ++ P Sbjct: 298 CVAACPVAVAELITANDPLNPARKKARIDRENCLGCGVCVRSCPVAAIRLESRP 351 >gi|150388818|ref|YP_001318867.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948680|gb|ABR47208.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 226 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 9 CILCKHTDCVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ CV CPV+ Y+ +N + +H +E CI C CE CP I + E Sbjct: 58 CNHCEDAPCVTACPVNPKAMYKQDNGITMHDEETCIGCRACETACPYGVIYYNDEEPFGK 117 Query: 66 W 66 W Sbjct: 118 W 118 >gi|330830052|ref|YP_004393004.1| NADH-quinone oxidoreductase subunit I [Aeromonas veronii B565] gi|328805188|gb|AEB50387.1| NADH-quinone oxidoreductase subunit I [Aeromonas veronii B565] Length = 180 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|295100394|emb|CBK97939.1| Iron only hydrogenase large subunit, C-terminal domain [Faecalibacterium prausnitzii L2-6] Length = 517 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I ++CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQEKCIKCGRCVGVCPYNAIVKTERP 177 >gi|256810428|ref|YP_003127797.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus fervens AG86] gi|256793628|gb|ACV24297.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus fervens AG86] Length = 247 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C LC C++ CP + + F+ I +C+ CG C+ CP +AI E + + K Sbjct: 159 CKLC--LKCIDACPNGAIIKRDGFVEISIHKCLGCGNCKKICPYNAIVEGKEIKMRVR-K 215 Query: 69 INSEYATQWPNI 80 I++E + + Sbjct: 216 IDAENTRRLKEL 227 >gi|269793046|ref|YP_003317950.1| glycyl-radical enzyme activating protein family [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100681|gb|ACZ19668.1| glycyl-radical enzyme activating protein family [Thermanaerovibrio acidaminovorans DSM 6589] Length = 301 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CP GE+ L + C+ CG+C CP DA++ Sbjct: 53 ERCVGCGR--CALACPAGAISYGEH-LRLDRSRCVRCGMCAQACPADAMR 99 >gi|269797247|ref|YP_003311147.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] gi|269093876|gb|ACZ23867.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] Length = 70 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG+ I CI CG C CPV A+K Sbjct: 4 LKFNIDDTCVKCGA--CAEDCPVQCITEGKTRFIIGKG-CIGCGDCYSICPVGAVK 56 >gi|224437244|ref|ZP_03658221.1| ferredoxin [Helicobacter cinaedi CCUG 18818] gi|313143705|ref|ZP_07805898.1| ferredoxin [Helicobacter cinaedi CCUG 18818] gi|313128736|gb|EFR46353.1| ferredoxin [Helicobacter cinaedi CCUG 18818] Length = 83 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++ CI C C E CP EG+ +I PD C +C C CPVDA Sbjct: 1 MALMINNECIACDA--CAEECPNGAIEEGDPIYSIDPDVCTECVGSYDEPSCLSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IVPD 62 >gi|89053933|ref|YP_509384.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88863482|gb|ABD54359.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 254 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D + G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGARELDQDEGV 144 >gi|330864198|emb|CBX74259.1| electron transport complex protein rnfB [Yersinia enterocolitica W22703] Length = 126 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 28 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 82 >gi|327309969|ref|YP_004336866.1| sulfur reductase subunit B [Thermoproteus uzoniensis 768-20] gi|326946448|gb|AEA11554.1| sulfur reductase, subunit B [Thermoproteus uzoniensis 768-20] Length = 266 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C C++ C VCP ++ + + I+ D CI C CE CP I D Sbjct: 70 TFSVPISCFHCRNPACTTVCPTGAIFKRKEDGVVVINYDVCIGCRYCENACPYGNITFDP 129 Query: 60 EPGL--ELWLKINSEYATQWP---NITTKKESLPSAAKMDG 95 G+ + L I+ Y P I + P+ A++ G Sbjct: 130 VEGVSKKCTLAIDRIYDESLPEYERIPPCVRNCPAGARIFG 170 >gi|317491979|ref|ZP_07950412.1| glutamate synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920004|gb|EFV41330.1| glutamate synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 687 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +LC+H + C VCP + ++ + + ++CI C C CP A++ T P Sbjct: 54 VLCRHCEDAPCANVCPNHAIEKRDDSIQVIQEKCIGCKTCVVACPFGAMEVITHPA 109 >gi|309389497|gb|ADO77377.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium praevalens DSM 2228] Length = 329 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C + C +VCPVD +N I ++C++CG C +CP I+ Sbjct: 217 GCIAC--SLCAKVCPVDAIEIKDNLAVIDYEKCVNCGKCAEKCPTGTIQ 263 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 16 DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DC VCP D Y EN L I P++C CG C ECP Sbjct: 148 DCESVCPFDAIYMSENGLPQIDPEKCTACGKCITECP 184 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 + +NC+ C T C CPV+ EGE N I D+CI CG+C C V A+ Sbjct: 274 INDNCVGC--TLCARACPVEAI-EGEVKNRHQIDQDKCIQCGLCFEACNVKAV 323 >gi|262369340|ref|ZP_06062668.1| NADH-quinone oxidoreductase subunit I [Acinetobacter johnsonii SH046] gi|262315408|gb|EEY96447.1| NADH-quinone oxidoreductase subunit I [Acinetobacter johnsonii SH046] Length = 180 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 116 MTPDFELG---------EYVRQ--DLVYEKENL 137 >gi|284174515|ref|ZP_06388484.1| NADH dehydrogenase subunit I [Sulfolobus solfataricus 98/2] gi|261601935|gb|ACX91538.1| NADH-quinone oxidoreductase, chain I [Sulfolobus solfataricus 98/2] Length = 167 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C +CP D G+ F I+ C+ CG C CPVDA+K Sbjct: 54 MIRLYKDVCIGC--TLCALICPADAMKMVTESGKKFPQINYGRCVFCGFCVDVCPVDALK 111 >gi|258404574|ref|YP_003197316.1| Cobyrinic acid ac-diamide synthase [Desulfohalobium retbaense DSM 5692] gi|257796801|gb|ACV67738.1| Cobyrinic acid ac-diamide synthase [Desulfohalobium retbaense DSM 5692] Length = 285 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 FY GE AI P +C +CGVC C AI D E LE Sbjct: 55 FYSGE-LPAIDPQKCTECGVCASSCRFGAISEDIEIRLE 92 >gi|51595156|ref|YP_069347.1| anaerobic dimethyl sulfoxide reductase, subunit B [Yersinia pseudotuberculosis IP 32953] gi|51588438|emb|CAH20046.1| anaerobic dimethyl sulfoxide reductase, subunit B [Yersinia pseudotuberculosis IP 32953] Length = 205 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ + F+ ++ D CI C C CP A + D Sbjct: 59 FAYYLSIACNHCSDPACTKVCPSGAMHKRNDGFVVVNEDICIGCRYCHMACPYGAPQYDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|261253562|ref|ZP_05946135.1| electron transport complex protein RnfB [Vibrio orientalis CIP 102891] gi|260936953|gb|EEX92942.1| electron transport complex protein RnfB [Vibrio orientalis CIP 102891] Length = 194 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|251791771|ref|YP_003006492.1| putative oxidoreductase Fe-S binding subunit [Dickeya zeae Ech1591] gi|247540392|gb|ACT09013.1| glutamate synthase, small subunit [Dickeya zeae Ech1591] Length = 667 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ + C VCP ++ + + ++CI C C CP AI + + Sbjct: 56 CRHCEDSPCANVCPTQALVRKQDGIQLVAEKCIGCKTCVLACPFGAITVENQ 107 >gi|157148258|ref|YP_001455577.1| formate hydrogenlyase complex iron-sulfur subunit [Citrobacter koseri ATCC BAA-895] gi|157085463|gb|ABV15141.1| hypothetical protein CKO_04075 [Citrobacter koseri ATCC BAA-895] Length = 180 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Query: 7 ENCILCKHTDCVEVCPVD------CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + C GE + CI C CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETCLVTGELAWQFNLGRCIFCARCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLKIN 70 L +W K + Sbjct: 96 YELAVWKKAD 105 >gi|281356043|ref|ZP_06242536.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] gi|281317412|gb|EFB01433.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] Length = 572 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CP + + D C+ CG+C CP A I+PD L YA Sbjct: 20 CIRHCPCKAIRIVDGRAGVIQDLCVACGMCVKVCPAHAKKIRPDLARARMLLGSGKRVYA 79 Query: 75 TQWPNITTKKESLPSAAKMDGVKQ 98 + P+ + ++LP A +K+ Sbjct: 80 SLAPSFVSYFKNLPPGALAAAIKK 103 >gi|45359066|ref|NP_988623.1| pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] gi|45047941|emb|CAF31059.1| conserved archaeal protein, pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] Length = 167 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C+EVCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAI 90 >gi|186681639|ref|YP_001864835.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nostoc punctiforme PCC 73102] gi|186464091|gb|ACC79892.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nostoc punctiforme PCC 73102] Length = 74 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPVD-AI 55 +VTE C DCV+ CPV C ++G ++ I CIDCG+C CPV+ AI Sbjct: 5 IVTEVCE--GVADCVDACPVACIHDGPGKNAKGTDWYWIDFATCIDCGICLQVCPVEGAI 62 Query: 56 KPDTEPGLE 64 + P L+ Sbjct: 63 LAEERPELQ 71 >gi|330448648|ref|ZP_08312296.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492839|dbj|GAA06793.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 186 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C+H + C VCPV + + + ++ C+ C +C CP AI D + + Sbjct: 31 VMCRHCEDAPCAAVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFDGSRPIAMA 90 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMD 94 ++ Y P + S+PS D Sbjct: 91 NSYDT-YIPSTPRSSNPSTSIPSTFGQD 117 >gi|292655142|ref|YP_003535039.1| NADH dehydrogenase-like complex subunit I [Haloferax volcanii DS2] gi|291370688|gb|ADE02915.1| NADH dehydrogenase-like complex subunit I [Haloferax volcanii DS2] Length = 153 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVQDDQRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|269119596|ref|YP_003307773.1| electron transport complex, RnfABCDGE type, C subunit [Sebaldella termitidis ATCC 33386] gi|268613474|gb|ACZ07842.1| electron transport complex, RnfABCDGE type, C subunit [Sebaldella termitidis ATCC 33386] Length = 438 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 12/55 (21%) Query: 7 ENCILCKHTDCVEVCPV-------DCFYEG---ENFLAIHPDECIDCGVCEPECP 51 +NCILC + C EVCPV + FY + L + + CI+CG CE CP Sbjct: 362 KNCILCGY--CSEVCPVYLMPMKFEEFYRKGKYKKLLEFNLNSCIECGACEYICP 414 >gi|90407583|ref|ZP_01215764.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Psychromonas sp. CNPT3] gi|90311286|gb|EAS39390.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Psychromonas sp. CNPT3] Length = 205 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +LC+H + C VCPV+ + I+ CI C +C CP AI G+ L Sbjct: 49 VLCRHCEDAPCATVCPVNAITHVNGSIHINESLCIGCTLCSIACPFGAITFSGSRGVGL 107 >gi|114563171|ref|YP_750684.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334464|gb|ABI71846.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 190 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 +C C+ CV VCP Y EN ++IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVSVCPTGAAYIDENGLVSIHNDKCVGCMYCVAACP 103 >gi|328952548|ref|YP_004369882.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] gi|328452872|gb|AEB08701.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] Length = 1503 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 E C++C C CP E+ F+ I P EC CG C CP Sbjct: 1424 EKCVVC--MTCARTCPFGAPKVAEDGFIDIDPAECHGCGNCASACP 1467 >gi|289191965|ref|YP_003457906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938415|gb|ADC69170.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 164 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 I+C+H C EVCPV + ++ ++ + CI CG+C CP AI Sbjct: 42 IICQHCASAPCKEVCPVSAIEHKDGYVYLNEEICIGCGLCALACPFGAI 90 >gi|222479143|ref|YP_002565380.1| NADH-quinone oxidoreductase, chain I [Halorubrum lacusprofundi ATCC 49239] gi|222452045|gb|ACM56310.1| NADH-quinone oxidoreductase, chain I [Halorubrum lacusprofundi ATCC 49239] Length = 153 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVQDDQRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|90578228|ref|ZP_01234039.1| hydrogenase 4 Fe-S subunit [Vibrio angustum S14] gi|90441314|gb|EAS66494.1| hydrogenase 4 Fe-S subunit [Vibrio angustum S14] Length = 204 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C+H + C VCPV + + + ++ C+ C +C CP AI D + + Sbjct: 49 VMCRHCEDAPCAAVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFDGSRPIAMA 108 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMD 94 ++ Y P + S+PS D Sbjct: 109 NSYDT-YIPSTPRSSNPSTSIPSTFGQD 135 >gi|15899490|ref|NP_344095.1| ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus P2] gi|284174261|ref|ZP_06388230.1| ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus 98/2] gi|13816112|gb|AAK42885.1| Ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus P2] gi|261601262|gb|ACX90865.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 89 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 V T+ C+ CK C +VCP + + + +H + C++CG CP AIK Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIVVHYERCLECGAALVACPYGAIK 76 >gi|289191766|ref|YP_003457707.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938216|gb|ADC68971.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 260 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP++ + + + I+ D+CI CG C CP +AIK Sbjct: 215 CVEECPINAIEQEGDKVKINKDKCILCGRCADVCPANAIK 254 >gi|254162798|ref|YP_003045906.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli B str. REL606] gi|253974699|gb|ACT40370.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli B str. REL606] gi|253978865|gb|ACT44535.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BL21(DE3)] Length = 110 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 3 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 62 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 63 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 109 >gi|258405501|ref|YP_003198243.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfohalobium retbaense DSM 5692] gi|257797728|gb|ACV68665.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfohalobium retbaense DSM 5692] Length = 793 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 8 NCILCKHTD-CVEVCPVDCF----YEGENF-LAIHPDECIDCGVCEPECP 51 +C C+ C+E+CP GE+F + P++CI CG C CP Sbjct: 731 SCGACRDCGLCIEICPQTAINRRQLSGEDFEMVADPEKCIGCGFCAQACP 780 >gi|145592049|ref|YP_001154051.1| thiamine pyrophosphate binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283817|gb|ABP51399.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Pyrobaculum arsenaticum DSM 13514] Length = 604 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 I P C+ CG+C CPVDAIK D LE+W Sbjct: 568 IDPALCVGCGMCAEVCPVDAIKGDGARVKWLEVW 601 >gi|220931135|ref|YP_002508043.1| Ferredoxin hydrogenase [Halothermothrix orenii H 168] gi|219992445|gb|ACL69048.1| Ferredoxin hydrogenase [Halothermothrix orenii H 168] Length = 456 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 5/82 (6%) Query: 4 VVTEN---CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VVT N C LC+ + C V C + L I CI CG C P+CP++A+ E Sbjct: 87 VVTVNRKICDLCQKKYGPDYCRVGCDINEKEGLLIEDGRCISCGKCIPKCPLEAVSDKVE 146 Query: 61 PG-LELWLKINSE-YATQWPNI 80 L +LK +++ YA P I Sbjct: 147 FFPLYKYLKNDTQVYANVAPAI 168 >gi|332981009|ref|YP_004462450.1| dihydroorotate oxidase [Mahella australiensis 50-1 BON] gi|332698687|gb|AEE95628.1| dihydroorotate oxidase [Mahella australiensis 50-1 BON] Length = 385 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 D+C CG+C P C DAI TEP Sbjct: 334 DKCTSCGICAPLCIFDAIDSSTEP 357 >gi|331270189|ref|YP_004396681.1| anaerobic sulfite reductase subunit C [Clostridium botulinum BKT015925] gi|329126739|gb|AEB76684.1| anaerobic sulfite reductase subunit C [Clostridium botulinum BKT015925] Length = 304 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C +E C + Y+ E+ +AI ++CI+CG C C A++ E G++++ Sbjct: 170 EKCKNCGKCAVIEKCRMKAVYKVEDRVAIDREKCINCGKCIENCYFSAMEV-KEEGMKIY 228 Query: 67 L 67 L Sbjct: 229 L 229 >gi|90578562|ref|ZP_01234372.1| hypothetical iron-sulfur cluster-binding protein [Vibrio angustum S14] gi|90439395|gb|EAS64576.1| hypothetical iron-sulfur cluster-binding protein [Vibrio angustum S14] Length = 551 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + L I D C+ CG+CE CP I Sbjct: 416 TTDCTLC--MSCVAVCPTRALHAIGDRPGLLFIEED-CVQCGMCEKACPEKVI 465 >gi|83952617|ref|ZP_00961347.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83835752|gb|EAP75051.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 264 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRTEDGIVLVNESDCIGCGLCAWACPYGARELDQAEGV 144 >gi|332534029|ref|ZP_08409878.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis ANT/505] gi|332036466|gb|EGI72934.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis ANT/505] Length = 184 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|320540447|ref|ZP_08040097.1| putative NADH:ubiquinone oxidoreductase, chain I [Serratia symbiotica str. Tucson] gi|320029378|gb|EFW11407.1| putative NADH:ubiquinone oxidoreductase, chain I [Serratia symbiotica str. Tucson] Length = 176 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVSCISLQKAEQQDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFEMG 123 >gi|315651792|ref|ZP_07904796.1| iron-sulfur cluster-binding protein [Eubacterium saburreum DSM 3986] gi|315485922|gb|EFU76300.1| iron-sulfur cluster-binding protein [Eubacterium saburreum DSM 3986] Length = 317 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-----PDECIDCGVCEPECPVD 53 VV I C +CP+ Y N + + PD+C++CG+CE C +D Sbjct: 201 VVVALSIFTYRPFCKYICPLGAMYSFFNKIGFYKMEFVPDKCVNCGLCEKSCKMD 255 >gi|260779356|ref|ZP_05888248.1| electron transport complex protein RnfB [Vibrio coralliilyticus ATCC BAA-450] gi|260605520|gb|EEX31815.1| electron transport complex protein RnfB [Vibrio coralliilyticus ATCC BAA-450] Length = 194 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|256829731|ref|YP_003158459.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578907|gb|ACU90043.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 293 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 DCV CP D + + + I PD+C CG C CP Sbjct: 145 DCVRACPFDAMWIENDLVHIAPDKCTSCGTCVRTCP 180 >gi|218780441|ref|YP_002431759.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761825|gb|ACL04291.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 301 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/29 (55%), Positives = 18/29 (62%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 AI+ DECI CG CE CPVD I +P Sbjct: 195 FAINQDECIQCGQCEDLCPVDGIDISADP 223 >gi|170289699|ref|YP_001736515.1| indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170173779|gb|ACB06832.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 649 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V + C C+ CP F + + + I P C CG C CP DAI+P Sbjct: 584 VNKDKCTYCRVCINTFACPA--FVDTGSSVEIDPAICFGCGACVQVCPYDAIEP 635 >gi|83309275|ref|YP_419539.1| ferredoxin-NADP reductase [Magnetospirillum magneticum AMB-1] gi|82944116|dbj|BAE48980.1| Ferredoxin-NADP reductase [Magnetospirillum magneticum AMB-1] Length = 393 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPVD ++G N++ + D+C C C CP AI Sbjct: 14 CIRC--NTCEEACPVDAITHDGTNYVVSY-DKCTGCRTCVSPCPTGAI 58 >gi|76666825|emb|CAJ31202.1| Adenosine-5-phosphosulfate reductase subunit B (AprB) [uncultured sulfate-reducing bacterium] Length = 152 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 18/125 (14%) Query: 2 TYVVTENCILCKHTD---CVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAI 55 +YV+ E C CK D C VCP D E + PD C +C C CPV AI Sbjct: 3 SYVIAEKCDGCKALDKTACQYVCPNDLMVLDEGQMKAFNQEPDMCWECYCCVKICPVQAI 62 Query: 56 K----PDTEPGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + D P L + + + W N K+ P +G Q ++++ Sbjct: 63 EVRGYADFVPMGALVTPLRATDSIMWTLKFRNGMLKRFKFPIRTTEEGKAQPFDQF---- 118 Query: 108 PGGKN 112 P G N Sbjct: 119 PTGDN 123 >gi|85708744|ref|ZP_01039810.1| NADH dehydrogenase subunit I [Erythrobacter sp. NAP1] gi|85690278|gb|EAQ30281.1| NADH dehydrogenase subunit I [Erythrobacter sp. NAP1] Length = 162 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 118 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EYAT+ T++E L AK+ K+E+ + N Sbjct: 119 EGP----------NFEYATE-----TREELLYDKAKLLANGDKWERAIAAN 154 >gi|219666619|ref|YP_002457054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219536879|gb|ACL18618.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 185 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA--IKPDT 59 + ++ C C + +C+ VCP + + + + +H PD+C C C CP A I P T Sbjct: 55 FFLSTACNHCANPECLRVCPYGAYAKRRDGIVLHFPDKCGSCKSCVASCPFGAPQINPQT 114 >gi|313201532|ref|YP_004040190.1| RnfABCDGE type electron transport complex subunit B [Methylovorus sp. MP688] gi|312440848|gb|ADQ84954.1| electron transport complex, RnfABCDGE type, B subunit [Methylovorus sp. MP688] Length = 280 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 93 VAFIDEQTCIGC--TLCIQACPVDAILGASKQMHTVIADECTGCELCIAPCPVDCI 146 >gi|303244235|ref|ZP_07330572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485362|gb|EFL48289.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 170 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C+H C EVCPV+ + + + +CI CG+C CP AI TE + Sbjct: 42 VVCQHCASAPCKEVCPVEAIENKDGVIYLDESKCIGCGLCAMACPFGAITM-TEVAHKCS 100 Query: 67 LKINSE 72 L I SE Sbjct: 101 LCIESE 106 >gi|297618262|ref|YP_003703421.1| electron transfer flavoprotein alpha/beta-subunit [Syntrophothermus lipocalidus DSM 12680] gi|297146099|gb|ADI02856.1| Electron transfer flavoprotein alpha/beta-subunit [Syntrophothermus lipocalidus DSM 12680] Length = 394 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 13/78 (16%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLE- 64 CI C CVE CP N + + D C CG C +CPV AI +P+T+ + Sbjct: 9 CIGCG--ICVETCPFGSITLVNN-VPVVSDTCTLCGSCAHDCPVGAIVITRPETKAKVAS 65 Query: 65 ------LWLKINSEYATQ 76 +WL+I+ Q Sbjct: 66 EAEDVWVWLEISDNQIKQ 83 >gi|322417691|ref|YP_004196914.1| NADH-quinone oxidoreductase subunit I [Geobacter sp. M18] gi|320124078|gb|ADW11638.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M18] Length = 176 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 12/65 (18%) Query: 6 TENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC EGEN + I+ CI CG+C CP AI Sbjct: 54 AERCVACYL--CSGACPVDCISMAAAEGENGRRYAVWFRINFSRCILCGLCAEACPTLAI 111 Query: 56 KPDTE 60 + +E Sbjct: 112 QMSSE 116 >gi|237798781|ref|ZP_04587242.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021634|gb|EGI01691.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 291 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + +EC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIIEECTGCDLCVAPCPVDCIE 137 >gi|157164645|ref|YP_001466166.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Campylobacter concisus 13826] gi|112800391|gb|EAT97735.1| electron transport protein HydN [Campylobacter concisus 13826] Length = 189 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP +N + +H + CI C +C CP AI E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFNDNCIELHEEICIGCKMCTIACPYGAISSSAE 104 >gi|73540750|ref|YP_295270.1| ferredoxin [Ralstonia eutropha JMP134] gi|72118163|gb|AAZ60426.1| Electron transport complex, RnfABCDGE type, B subunit [Ralstonia eutropha JMP134] Length = 248 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + I P+ C C +C P CPVD I Sbjct: 87 CIGC--TLCIQACPVDAIAGAAKQMHTIIPELCTGCDLCVPPCPVDCI 132 >gi|71900626|ref|ZP_00682752.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|71729620|gb|EAO31725.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] Length = 139 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +++ +CI C T C++ CPVD G + + C C +C P CPV+ I+ Sbjct: 81 VAWIIEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVECIE 135 >gi|22124776|ref|NP_668199.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis KIM 10] gi|45440219|ref|NP_991758.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Microtus str. 91001] gi|108808811|ref|YP_652727.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Antiqua] gi|108810934|ref|YP_646701.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|145600291|ref|YP_001164367.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides F] gi|153947293|ref|YP_001402217.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|153997629|ref|ZP_02022729.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CA88-4125] gi|162418201|ref|YP_001605488.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Angola] gi|165925705|ref|ZP_02221537.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936633|ref|ZP_02225200.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166010127|ref|ZP_02231025.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213010|ref|ZP_02239045.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399468|ref|ZP_02304992.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421626|ref|ZP_02313379.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423573|ref|ZP_02315326.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467625|ref|ZP_02332329.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis FV-1] gi|170025608|ref|YP_001722113.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis YPIII] gi|186894170|ref|YP_001871282.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis PB1/+] gi|218930345|ref|YP_002348220.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CO92] gi|229838947|ref|ZP_04459106.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896427|ref|ZP_04511595.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides A] gi|229899514|ref|ZP_04514655.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. India 195] gi|229901149|ref|ZP_04516272.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|270489331|ref|ZP_06206405.1| dimethylsulfoxide reductase, chain B [Yersinia pestis KIM D27] gi|294505035|ref|YP_003569097.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Z176003] gi|5002127|gb|AAD37318.1|AF135170_9 dimethyl sulfoxide reductase subunit B [Yersinia pestis] gi|21957598|gb|AAM84450.1|AE013689_5 anaerobic dimethyl sulfoxide reductase subunit B [Yersinia pestis KIM 10] gi|45435075|gb|AAS60635.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Microtus str. 91001] gi|108774582|gb|ABG17101.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|108780724|gb|ABG14782.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Antiqua] gi|115348956|emb|CAL21915.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CO92] gi|145211987|gb|ABP41394.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides F] gi|149289266|gb|EDM39346.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CA88-4125] gi|152958788|gb|ABS46249.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|162351016|gb|ABX84964.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis Angola] gi|165915282|gb|EDR33892.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922317|gb|EDR39494.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991034|gb|EDR43335.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205797|gb|EDR50277.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960545|gb|EDR56566.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051972|gb|EDR63380.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057743|gb|EDR67489.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752142|gb|ACA69660.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis YPIII] gi|186697196|gb|ACC87825.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis PB1/+] gi|229681874|gb|EEO77967.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|229687006|gb|EEO79081.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. India 195] gi|229695313|gb|EEO85360.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700501|gb|EEO88532.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides A] gi|262363098|gb|ACY59819.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis D106004] gi|262367026|gb|ACY63583.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis D182038] gi|270337835|gb|EFA48612.1| dimethylsulfoxide reductase, chain B [Yersinia pestis KIM D27] gi|294355494|gb|ADE65835.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Z176003] gi|320016518|gb|ADW00090.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 205 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 59 FAYYLSIACNHCSDPACTKVCPSGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|317492597|ref|ZP_07951024.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919347|gb|EFV40679.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 326 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H PD C C C CP D K D Sbjct: 108 IKKQCMHCVDANCVSVCPVQALRKDPKTGIVHYDPDVCTGCRYCMVGCPFDVPKYD 163 >gi|308273606|emb|CBX30208.1| hypothetical protein N47_D30170 [uncultured Desulfobacterium sp.] Length = 341 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 15/59 (25%) Query: 3 YVVTENCILCKHTDCVEVCPV------DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +NCILC DC+ VC DC + I+ D C CG+C +CP A+ Sbjct: 72 YHQPQNCILC--ADCLSVCQQGAITINDC-------VRINRDLCDGCGLCAGQCPAKAM 121 >gi|304315374|ref|YP_003850521.1| energy-converting hydrogenase B, subunit K [Methanothermobacter marburgensis str. Marburg] gi|302588833|gb|ADL59208.1| energy-converting hydrogenase B, subunit K [Methanothermobacter marburgensis str. Marburg] Length = 447 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E+CI C C E+CPVD + + D+CI C C CP DAI Sbjct: 322 VSEDCISCGV--CSEICPVDAITLKRGSIEVDTDKCILCEKCGIHCPADAI 370 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 17 CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+E+CP D + E+ + + D+CI CG C CP A+ + E GL Sbjct: 398 CLEICPEDAISKDESGLMMVDEDKCIHCGACSNICPARAVLFEREFGL 445 >gi|258404218|ref|YP_003196960.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796445|gb|ACV67382.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 144 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGLE 64 + C+ C C E CP + + ++ CI CG C CPVDAI D E Sbjct: 51 AQVCLACDPAPCAEACPTGAMRQRKGGGVVYTKSLCIQCGDCARACPVDAIYMDPETNAP 110 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMD 94 + P+ + ++PSA+K D Sbjct: 111 VVCIHCGRCVEFCPHDCLEMVTVPSASKED 140 >gi|227824723|ref|ZP_03989555.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905222|gb|EEH91140.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 411 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELWLKINSE-Y 73 C +VC D + G++ ++I D+C+ C C C +DA+ K D P +E K + Y Sbjct: 60 CAQVCHWDALHPGKDGISIDNDKCVGCQACVDACKLDALKTKKDIIPVVEELKKAETPIY 119 Query: 74 ATQWPNITTKKESLPSAAKM 93 A P + + S +A ++ Sbjct: 120 ALVAPAFSGQFGSKVTAGRL 139 >gi|189460038|ref|ZP_03008823.1| hypothetical protein BACCOP_00674 [Bacteroides coprocola DSM 17136] gi|189433199|gb|EDV02184.1| hypothetical protein BACCOP_00674 [Bacteroides coprocola DSM 17136] Length = 321 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P +C C CE ECP +AI Sbjct: 218 TAACIGCGK--CVKVCPFEAITLENNLAYIDPAKCKSCRKCETECPQNAI 265 >gi|150018616|ref|YP_001310870.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905081|gb|ABR35914.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 184 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V C C++ C +VCP++ +N + I + CI C C CP AI+ T+ Sbjct: 54 FTVPVQCRHCENAPCAKVCPINAIKNEDNAIIIDEEICIGCKACAVACPFGAIEMGTK 111 >gi|262375913|ref|ZP_06069144.1| electron transport complex protein [Acinetobacter lwoffii SH145] gi|262309007|gb|EEY90139.1| electron transport complex protein [Acinetobacter lwoffii SH145] Length = 263 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + V+ E+ CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 83 IKAVIREDECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 >gi|238756491|ref|ZP_04617796.1| Electron transport complex protein rnfB [Yersinia ruckeri ATCC 29473] gi|238705278|gb|EEP97690.1| Electron transport complex protein rnfB [Yersinia ruckeri ATCC 29473] Length = 207 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 109 VAFIDESNCIGC--TKCIQACPVDAIIGATRAMHTVLPDLCTGCDLCVDPCPTDCIE 163 >gi|119720719|ref|YP_921214.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525839|gb|ABL79211.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 131 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C++ C VCP + E + ++P +C+ CG C CP+ A++ D E Sbjct: 53 CRACENPPCAAVCPTNALVRREGGGVVLNPSKCVGCGNCARACPIGAVQWDYE 105 >gi|5734562|emb|CAB52788.1| polyferredoxin [Methanothermobacter thermautotrophicus] Length = 447 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E+CI C C E+CPVD + + D+CI C C CP DAI Sbjct: 322 VSEDCISCGV--CSEICPVDAITLKRGSIEVDTDKCILCEKCGIHCPADAI 370 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 17 CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+E+CP D + E+ + + D+CI CG C CP A+ + E GL Sbjct: 398 CLEICPEDAISKDESGLMMVDEDKCIHCGACSNICPARAVLFEREFGL 445 >gi|15803422|ref|NP_289455.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|15833012|ref|NP_311785.1| oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|217327883|ref|ZP_03443966.1| 4Fe-4S binding protein [Escherichia coli O157:H7 str. TW14588] gi|254794837|ref|YP_003079674.1| putative oxidoreductase [Escherichia coli O157:H7 str. TW14359] gi|12517409|gb|AAG58014.1|AE005518_8 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13363230|dbj|BAB37181.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|209760648|gb|ACI78636.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760650|gb|ACI78637.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760652|gb|ACI78638.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760654|gb|ACI78639.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760656|gb|ACI78640.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|217320250|gb|EEC28675.1| 4Fe-4S binding protein [Escherichia coli O157:H7 str. TW14588] gi|254594237|gb|ACT73598.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O157:H7 str. TW14359] gi|320189228|gb|EFW63887.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EC1212] gi|326339031|gb|EGD62846.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. 1044] gi|326343086|gb|EGD66854.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. 1125] Length = 131 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 24 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 77 >gi|308051341|ref|YP_003914907.1| thiosulfate reductase subunit beta [Ferrimonas balearica DSM 9799] gi|307633531|gb|ADN77833.1| thiosulfate reductase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C++ CV VCP Y GE+ ++I D+C+ C C CP V I P+T Sbjct: 59 SCEQCENAPCVHVCPTGAAYVGEDGIVSIKEDKCVGCLYCVAACPYKVRFINPETR 114 >gi|299483498|gb|ADJ19579.1| putative Fe-S PAS/PAC sensor protein [Treponema primitia ZAS-2] Length = 583 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP---------VDAIKPDTEPGLELWL 67 C+ CPV + I P CI CG C CP VD +K G++++ Sbjct: 19 CISRCPVKSIQVKDGHAEIIPKICIYCGNCVISCPARAKRVRNDVDQVKKLISRGVKVYA 78 Query: 68 KINSEYATQWPNITTKK 84 I YA+++ + K Sbjct: 79 SIAPAYASEFHGLPQAK 95 >gi|262280053|ref|ZP_06057838.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262260404|gb|EEY79137.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 87 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCD--VCEPVCPNEAIFMGEVIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTE 60 I D E Sbjct: 59 IPKDPE 64 >gi|77918446|ref|YP_356261.1| NADH dehydrogenase I subunit F [Pelobacter carbinolicus DSM 2380] gi|77544529|gb|ABA88091.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Pelobacter carbinolicus DSM 2380] Length = 617 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +TY + E+ C+ C C++ CPV GE A I +C+ CG C P+C DAI Sbjct: 560 LTYAIVEDKCVGCGV--CIKACPVGAI-TGEKKAAHTIDASKCVKCGACVPKCKFDAI 614 >gi|300711696|ref|YP_003737510.1| NADH-quinone oxidoreductase, chain I [Halalkalicoccus jeotgali B3] gi|299125379|gb|ADJ15718.1| NADH-quinone oxidoreductase, chain I [Halalkalicoccus jeotgali B3] Length = 153 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVQDEQRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|269125638|ref|YP_003299008.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310596|gb|ACY96970.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomonospora curvata DSM 43183] Length = 118 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ CI C CV+VCP+D F G + +C C +CE CP DA+ D + Sbjct: 5 VIASRCIQCDK--CVQVCPMDVFDAVPGGVPVIARQSDCQTCFMCELYCPADALYVDPDC 62 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAK 92 + + AT WP + A + Sbjct: 63 HGPVPVDEARILATDWPEQYRRDSGWGRARR 93 >gi|89894372|ref|YP_517859.1| hypothetical protein DSY1626 [Desulfitobacterium hafniense Y51] gi|219668798|ref|YP_002459233.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89333820|dbj|BAE83415.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539058|gb|ACL20797.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 92 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C+ CK C +CP + E EN +A+ + C++CG C CP I+ D G Sbjct: 26 ELCLKCKDKVCTFICPAHVYDWDEEENRIAVGYEGCLECGTCRVACPHGNIQWDYPRG 83 >gi|262280139|ref|ZP_06057924.1| NADH-quinone oxidoreductase subunit I [Acinetobacter calcoaceticus RUH2202] gi|262260490|gb|EEY79223.1| NADH-quinone oxidoreductase subunit I [Acinetobacter calcoaceticus RUH2202] Length = 180 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 116 MTPDFELG---------EYVRQ--DLVYEKENL 137 >gi|253583178|ref|ZP_04860376.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium varium ATCC 27725] gi|251833750|gb|EES62313.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium varium ATCC 27725] Length = 594 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 +TY +T+ CI C T C VCP+D ++ I+ + CI CG C C AI Sbjct: 538 ITYSITDKCIGC--TACARVCPIDAITGTVKHRHEINNEICIKCGACYETCKFGAI 591 >gi|189218491|ref|YP_001939132.1| Ferredoxin-like protein [Methylacidiphilum infernorum V4] gi|189185349|gb|ACD82534.1| Ferredoxin-like protein [Methylacidiphilum infernorum V4] Length = 99 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPEC 50 C LC C +CP C+ GE N +++ D C++CG C+ C Sbjct: 35 CSLCHDKSCTVLCPAGCYQRGEGNTVSLVTDGCLECGTCQVIC 77 >gi|209542887|ref|YP_002275116.1| NADH-quinone oxidoreductase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|209530564|gb|ACI50501.1| NADH-quinone oxidoreductase, chain I [Gluconacetobacter diazotrophicus PAl 5] Length = 170 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 20/90 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC +G ++ I+ CI CG CE CP AI+ Sbjct: 49 ERCVACGL--CAVACPVDCISLQKTEQDGRWYPDYFRINFSRCIFCGFCEEACPTYAIQ- 105 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ SEY P++ +KE L Sbjct: 106 -LTPDFEM-----SEYVR--PSLVYEKEDL 127 >gi|184200425|ref|YP_001854632.1| putative formate dehydrogenase iron-sulfur subunit [Kocuria rhizophila DC2201] gi|183580655|dbj|BAG29126.1| putative formate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] Length = 404 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C C H C++VCP + E + + D C CG C CP I+ Sbjct: 204 CKHCTHAGCLDVCPTGALFRTEYGTVVVQEDICNGCGTCVAGCPFGVIE 252 >gi|167772620|ref|ZP_02444673.1| hypothetical protein ANACOL_04001 [Anaerotruncus colihominis DSM 17241] gi|167665098|gb|EDS09228.1| hypothetical protein ANACOL_04001 [Anaerotruncus colihominis DSM 17241] Length = 371 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 6/50 (12%) Query: 12 CKHTDCVEVCPVDCFYEG-----ENFLAIHPDECIDCGVCEPECPVDAIK 56 C DC +C C G + F + PD C CG+C CP I+ Sbjct: 319 CTRIDC-GLCAASCLGGGIRLSSDGFYTVDPDACTGCGLCAARCPEHRIR 367 >gi|158522074|ref|YP_001529944.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510900|gb|ABW67867.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 385 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 CVE CPVD G A+ ++ CI CG+C CP AI Sbjct: 328 CVERCPVDAIVLGSEGTAVREEKYCIGCGICARFCPEGAI 367 >gi|91203437|emb|CAJ71090.1| similar to NAD(P) oxidoreductase, FAD-containing subunit [Candidatus Kuenenia stuttgartiensis] Length = 700 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV C+ C CV VCP D F GE I D C CG+C ECP AI+ T Sbjct: 491 AYVDEHLCVGC--ITCVRVCPFDVPEFRNGEITAYIGGD-CQSCGLCIVECPAKAIRFKT 547 >gi|87200306|ref|YP_497563.1| NADH dehydrogenase subunit I [Novosphingobium aromaticivorans DSM 12444] gi|115502536|sp|Q2G5Z4|NUOI_NOVAD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|87135987|gb|ABD26729.1| NADH dehydrogenase subunit I [Novosphingobium aromaticivorans DSM 12444] Length = 161 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAEPREDGSRRTTRYDIDMTKCIFCGFCQEACPVDAIV 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EYAT+ T++E L AK+ K+E+ + N Sbjct: 118 EGP----------NFEYATE-----TREELLYDKAKLLSNGDKWERAIAAN 153 >gi|320535768|ref|ZP_08035850.1| ferredoxin [Treponema phagedenis F0421] gi|320147378|gb|EFW38912.1| ferredoxin [Treponema phagedenis F0421] Length = 56 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++E CI C C CPV+ E + I CI CG C CP AI + Sbjct: 1 MAYKISEECINCGA--CKSECPVNAISEQTDMHVIDAGLCISCGACAEVCPAQAISEE 56 >gi|313672609|ref|YP_004050720.1| tetrathionate reductase beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939365|gb|ADR18557.1| tetrathionate reductase beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 217 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C++ CV+ CPV+ Y+G + L + D CI CG C CP +A D G+ Sbjct: 92 CNHCENPPCVKPCPVNATYKGPDGLVVIDDNVCIGCGKCVKACPYNARFLDPIRGIANKC 151 Query: 68 KI--NSEYATQWPNITTKKESLPSAAKMDG 95 + Y+ + P E+ P+ AK+ G Sbjct: 152 SFCDHRIYSGKLPACV---EACPTTAKIFG 178 >gi|288871693|ref|ZP_06410268.1| conserved domain protein [Clostridium hathewayi DSM 13479] gi|288862395|gb|EFC94693.1| conserved domain protein [Clostridium hathewayi DSM 13479] Length = 88 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ VCP +C +G F I + CI CG C CP AIK Sbjct: 47 KCLSVCPSNCIEQGPPF-QIREENCIHCGTCYKTCPYAAIK 86 >gi|255322780|ref|ZP_05363922.1| electron transport protein HydN [Campylobacter showae RM3277] gi|255300122|gb|EET79397.1| electron transport protein HydN [Campylobacter showae RM3277] Length = 248 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP +N + +H + CI C +C CP AI E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFDDNCIELHEEICIGCKLCTIACPYGAISSSAE 104 >gi|269928392|ref|YP_003320713.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787749|gb|ACZ39891.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 290 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C + C+E CP E + + + D C CG C P CP I D G Sbjct: 100 MMSDVCKHCVNAGCMEACPTGAIIRTEFDTVVVQQDVCNGCGYCVPACPFGVIALDLGDG 159 >gi|119899774|ref|YP_934987.1| iron-sulfur cluster-binding protein [Azoarcus sp. BH72] gi|119672187|emb|CAL96101.1| conserved hypothetical iron-sulfur cluster-binding protein [Azoarcus sp. BH72] Length = 701 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Query: 11 LCKHT--------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H+ +C+EVC + N + + P C CG C CP A+ Sbjct: 315 LCAHSRAKKPGCNNCIEVCSTEAIRADGNVITVDPYLCKGCGTCSTVCPSGAL 367 >gi|110678320|ref|YP_681327.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseobacter denitrificans OCh 114] gi|109454436|gb|ABG30641.1| 4Fe-4S binding domain protein [Roseobacter denitrificans OCh 114] Length = 252 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQAEGV 138 >gi|304559052|gb|ADM41716.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Edwardsiella tarda FL6-60] Length = 655 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +LC+H + C VCP + + + + ++CI C C CP AI+ T+ Sbjct: 31 LLCRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIEVITQ 84 >gi|298571367|gb|ADI87709.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [uncultured Nitrospirae bacterium MY3-5B] Length = 266 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD-------TE 60 C+ C+ C EVCPV ++ + +AI D+CI C C CP A D Sbjct: 112 CMQCELPPCTEVCPVGATWKRLDGVVAIDYDKCIGCRYCLSACPYGARTSDFNEYYTENT 171 Query: 61 PGLELW-LKINSEYATQW 77 P ++ + L N+EY W Sbjct: 172 PKIQPYELLPNNEYGKAW 189 >gi|296134443|ref|YP_003641690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296033021|gb|ADG83789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 190 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C+ C + CP + + + I+ C+ C VC CP AI T P E Sbjct: 63 QCRQCEDAPCAQACPTGAIRQEDGLVKINEQNCVGCKVCSMVCPFGAIVVTTVPNAE 119 >gi|293609132|ref|ZP_06691435.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829705|gb|EFF88067.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 180 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|292656847|ref|YP_003536744.1| ferredoxin [Haloferax volcanii DS2] gi|291371411|gb|ADE03638.1| ferredoxin (3Fe-4S)(4Fe-4S) [Haloferax volcanii DS2] Length = 109 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-------YEGENFLA--IHPDECIDCGVCEPECPV 52 T+V + I C+E CPVD F + + A H D+CIDC +C CPV Sbjct: 37 THVAVDFDICLADGACLEDCPVDVFTWVDTPGHPESDIKAEPTHEDQCIDCMLCVDVCPV 96 Query: 53 DAIKPDTEPG 62 DAI D +PG Sbjct: 97 DAI--DVDPG 104 >gi|227828775|ref|YP_002830555.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|229585982|ref|YP_002844484.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238620967|ref|YP_002915793.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|227460571|gb|ACP39257.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|228021032|gb|ACP56439.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238382037|gb|ACR43125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|323475842|gb|ADX86448.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] gi|323478584|gb|ADX83822.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 89 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 V T+ C+ CK C +VCP + + + +H + C++CG CP AIK Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIIVHYERCLECGAALVACPYGAIK 76 >gi|206578002|ref|YP_002237195.1| AegA protein [Klebsiella pneumoniae 342] gi|290508337|ref|ZP_06547708.1| oxidoreductase Fe-S binding subunit [Klebsiella sp. 1_1_55] gi|206567060|gb|ACI08836.1| AegA protein [Klebsiella pneumoniae 342] gi|289777731|gb|EFD85728.1| oxidoreductase Fe-S binding subunit [Klebsiella sp. 1_1_55] Length = 660 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 8 NCILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 N I C+H + CV CP D + + + + ++CI C C CP ++ P Sbjct: 52 NAITCRHCEDAPCVRSCPNDAIAQSGDSVQVSQEKCIGCKSCMVACPFGVMQVVVTP 108 >gi|147677003|ref|YP_001211218.1| iron only hydrogenase large subunit [Pelotomaculum thermopropionicum SI] gi|146273100|dbj|BAF58849.1| iron only hydrogenase large subunit, C-terminal domain [Pelotomaculum thermopropionicum SI] Length = 530 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGL 63 + CILC C+EVC V+ Y + + CI+CG C CP AI + DT+ Sbjct: 91 QKCILCGQ--CLEVCKNVESVYGYYDLPVVDETICINCGQCSMACPSGAISERDDTKKVF 148 Query: 64 E 64 E Sbjct: 149 E 149 >gi|94498903|ref|ZP_01305441.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Oceanobacter sp. RED65] gi|94428535|gb|EAT13507.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Oceanobacter sp. RED65] Length = 195 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP- 57 M V+ E+ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 108 MVAVIREDECIGC--TKCIQACPVDAILGAAKQMHTVIEDECTGCDLCLDPCPVDCIDML 165 Query: 58 DTEPGLELW 66 + G++ W Sbjct: 166 PVDQGIQAW 174 >gi|90411449|ref|ZP_01219460.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium profundum 3TCK] gi|90327662|gb|EAS44005.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium profundum 3TCK] Length = 204 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ C C C +VCP ++ E+ F+ + D CI C CE CP A + + E Sbjct: 59 SYYLSIACNHCDEPACTKVCPSGAMHKREDGFVIVDEDVCIGCKYCEMACPYGAPQYNEE 118 Query: 61 PG 62 G Sbjct: 119 KG 120 >gi|91772585|ref|YP_565277.1| CoB--CoM heterodisulfide reductase subunit A [Methanococcoides burtonii DSM 6242] gi|91711600|gb|ABE51527.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A with C-terminal mvhD-like electron transfer domain [Methanococcoides burtonii DSM 6242] Length = 786 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 19/71 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA------------------IHPDECIDCG 44 YV+ +NC C +C VCPVD ++ L I+ D C+ CG Sbjct: 237 YVIIDNCKGCID-ECARVCPVDISNPFDSGLGKTKAINMPIPQAIPQTAFINSDYCVGCG 295 Query: 45 VCEPECPVDAI 55 +C+ CP DAI Sbjct: 296 LCKQACPADAI 306 >gi|320184796|gb|EFW59587.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri CDC 796-83] Length = 222 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|225180960|ref|ZP_03734408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168441|gb|EEG77244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 90 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C+ C+ VCP F+ E E L I C++C CEP CP Sbjct: 25 AKHCKTCRLRACLYVCPSAVFFWDELEEKLDIFWRRCVECAACEPACP 72 >gi|119473031|ref|ZP_01614853.1| electron transport complex protein RnfB [Alteromonadales bacterium TW-7] gi|119444609|gb|EAW25921.1| electron transport complex protein RnfB [Alteromonadales bacterium TW-7] Length = 184 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|20093747|ref|NP_613594.1| formylmethanofuran dehydrogenase subunit F, ferredoxin containing [Methanopyrus kandleri AV19] gi|19886647|gb|AAM01524.1| Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing [Methanopyrus kandleri AV19] Length = 357 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 13/61 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C E CP D E E + + D+C+ CGVC CPVDAI Sbjct: 154 EKCIYCKA--CEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAI 211 Query: 56 K 56 K Sbjct: 212 K 212 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 20/83 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C+ C CVEVCP G+ + HP+ C CG C CPV+AI Sbjct: 273 EECVGCGL--CVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARACPVNAI----- 325 Query: 61 PGLELWLKINSEYATQWPNITTK 83 + E T P + TK Sbjct: 326 -------TVVREGVTAMPELPTK 341 >gi|325276132|ref|ZP_08141941.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas sp. TJI-51] gi|324098731|gb|EGB96768.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas sp. TJI-51] Length = 806 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKK 84 D+CI+CG CEP CP + + +W I A Q I T++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQ---AKQRAGIETRE 581 >gi|225850220|ref|YP_002730454.1| 4Fe-4S binding domain protein [Persephonella marina EX-H1] gi|225646094|gb|ACO04280.1| 4Fe-4S binding domain protein [Persephonella marina EX-H1] Length = 360 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CV+VCPV D Y E L I ++C++CG C CP +A Sbjct: 24 SKCVDVCPVKDAIYFDEGKLKIDDEKCVNCGACFGICPTEAF 65 >gi|206891168|ref|YP_002247862.1| tetrathionate reductase, subunit B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743106|gb|ACI22163.1| tetrathionate reductase, subunit B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGLEL 65 +LC H D CV VCPV ++ + + + CI C C CP A + P + Sbjct: 117 LLCNHCDNAPCVRVCPVKATFKRADGITMQDMHRCIGCKFCMAGCPYGARNYNFLPPRDY 176 Query: 66 WLKINSEYATQWPNITTK 83 ++N EY T+ + K Sbjct: 177 IKELNPEYPTRTIGVVEK 194 >gi|163732626|ref|ZP_02140071.1| 4Fe-4S binding domain protein [Roseobacter litoralis Och 149] gi|161393986|gb|EDQ18310.1| 4Fe-4S binding domain protein [Roseobacter litoralis Och 149] Length = 252 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQAEGV 138 >gi|170743893|ref|YP_001772548.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168198167|gb|ACA20114.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 320 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C + C+E CP ++ E + + + D C CG C P CP + T G Sbjct: 116 MMSDVCKHCHNAPCLEACPTGALFKTEFDTVVVQQDICNGCGYCVPACPFGVVDVSTVDG 175 >gi|118443510|ref|YP_878766.1| anaerobic sulfite reductase subunit C [Clostridium novyi NT] gi|118133966|gb|ABK61010.1| anaerobic sulfite reductase subunit C [Clostridium novyi NT] Length = 304 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C C +E C + Y+ +N + I ++CI+CG C C +A++ + E G++++ Sbjct: 170 DKCKSCGKCGVIEKCRMKAAYKEDNKVVIDREKCINCGKCIENCYFNAMETNQE-GMKIY 228 Query: 67 L 67 L Sbjct: 229 L 229 >gi|304438798|ref|ZP_07398725.1| electron transport complex protein RnfB [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372721|gb|EFM26300.1| electron transport complex protein RnfB [Peptoniphilus duerdenii ATCC BAA-1640] Length = 315 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C + CP D + +N AI +CI+CG+C CP AI Sbjct: 222 SNGCIGCGI--CEKKCPKDAIHVTDNLAAIDYTKCINCGICVANCPTGAI 269 >gi|269216153|ref|ZP_06160007.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] gi|269130412|gb|EEZ61490.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] Length = 190 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y V+ C C C+EVCP + +G + + CI CG C CP A P Sbjct: 39 FAYHVSLACNHCDQPACMEVCPTGAMHKDGLGLVQVDHMRCIGCGYCTIACPYHA--PSI 96 Query: 60 EPGLE 64 +P L Sbjct: 97 DPALH 101 >gi|302875371|ref|YP_003844004.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] gi|307688950|ref|ZP_07631396.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] gi|302578228|gb|ADL52240.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] Length = 417 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ + C+ C C + CP+ + A+ + C+ CGVC CP +I Sbjct: 287 VIKDGCVGCGK--CAKACPIGAITMKDKKAAVDEEICLGCGVCVRNCPKKSI 336 >gi|218780880|ref|YP_002432198.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762264|gb|ACL04730.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 366 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E+C+ C C E C + E ++PDECI CGVC CP A+K Sbjct: 288 VAGEDCVGCG--TCTERCFFNALTVDEETERAVVNPDECIGCGVCALGCPTGALK 340 >gi|146304647|ref|YP_001191963.1| NADH dehydrogenase subunit I [Metallosphaera sedula DSM 5348] gi|145702897|gb|ABP96039.1| NADH-quinone oxidoreductase, chain I [Metallosphaera sedula DSM 5348] Length = 169 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C VCP D +G+ F I+ C+ C C CPVDA+K Sbjct: 57 MIRLYKDVCIGC--TLCAMVCPADAMKMVTDQGKKFPTINYGRCVFCAFCVDICPVDALK 114 >gi|312136489|ref|YP_004003826.1| pyruvate ferredoxin oxidoreductase, delta subunit [Methanothermus fervidus DSM 2088] gi|311224208|gb|ADP77064.1| pyruvate ferredoxin oxidoreductase, delta subunit [Methanothermus fervidus DSM 2088] Length = 80 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C C+ CP C E I+ D C CG+CE ECPV+AIK E Sbjct: 32 KKCIKC--NTCILFCPEGCIDENH---EINYDYCKGCGICEEECPVNAIKTVKE 80 >gi|262378879|ref|ZP_06072036.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262300164|gb|EEY88076.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 87 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCD--VCEPVCPNEAIFMGEMIYEIHPDLCTECVGHHEQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKKES 86 I D ++ E ++ +T +K + Sbjct: 59 IPHDPN-----HVETEDELMQKYKMLTAQKSA 85 >gi|291612995|ref|YP_003523152.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] gi|291583107|gb|ADE10765.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] Length = 431 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ CP +G+ L I+P CI GVC P CP +AIK Sbjct: 64 CITACPEGAIGMIKGKAVL-INPTHCIGHGVCAPACPHNAIK 104 >gi|149926238|ref|ZP_01914500.1| ferredoxin [Limnobacter sp. MED105] gi|149825056|gb|EDM84268.1| ferredoxin [Limnobacter sp. MED105] Length = 160 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 8/108 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++CI C T C++ CPVD + A+ + C C +C P CPVD I P Sbjct: 30 QHCIGC--TLCIKACPVDAIVGSSKRRHAVLAELCTGCELCIPPCPVDCIDMVFMPEFSA 87 Query: 66 WLKINSEYA-----TQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W + + A T+ + +KE + + + E +P+P Sbjct: 88 WDQTQAHAARTRMQTREIRLERQKEEQAERLEAKAIHKLDELDDTPSP 135 >gi|17229800|ref|NP_486348.1| hypothetical protein alr2308 [Nostoc sp. PCC 7120] gi|17131400|dbj|BAB74007.1| alr2308 [Nostoc sp. PCC 7120] Length = 425 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C ++CP ++ +NF + +C CG C P CP D I Sbjct: 116 CEKICPAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDII 157 >gi|331001648|ref|ZP_08325171.1| hypothetical protein HMPREF0491_00033 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413369|gb|EGG92736.1| hypothetical protein HMPREF0491_00033 [Lachnospiraceae oral taxon 107 str. F0167] Length = 507 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C EVCP + F +I+ ++CI CG C C +AI T P Sbjct: 117 VTDGCQGCLAHPCSEVCPTGAVKIDKESGFSSINQEKCIKCGRCANVCAYNAIIVQTRP 175 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 13/105 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT------- 59 N I+ + C C +D EN A I D+C+ CG C CP AI + Sbjct: 167 NAIIVQTRPCAASCGMDAISSDENGKADIDYDKCVSCGQCLVNCPFGAISDKSQIFQTIR 226 Query: 60 --EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ I + Q+ P +T K L +A K G +E Sbjct: 227 AIQSGDRVYAAIAPAFVGQFGPKVTPGK--LRAAMKELGFADVFE 269 >gi|313125962|ref|YP_004036232.1| NADH:ubiquinone oxidoreductase chain i-like protein [Halogeometricum borinquense DSM 11551] gi|312292327|gb|ADQ66787.1| NADH:ubiquinone oxidoreductase chain I-like protein [Halogeometricum borinquense DSM 11551] Length = 114 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 11/70 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHP---DECIDCGVCEPECPV 52 T+V + I C+E CPVD F E+ + + P D+CIDC +C CPV Sbjct: 42 THVAVDFDICIGDGACLEDCPVDVFSWVDTPGHPESEVKVQPAREDQCIDCMLCVDVCPV 101 Query: 53 DAIKPDTEPG 62 DAI D +PG Sbjct: 102 DAI--DVDPG 109 >gi|299771412|ref|YP_003733438.1| NADH dehydrogenase subunit I [Acinetobacter sp. DR1] gi|298701500|gb|ADI92065.1| NADH dehydrogenase subunit I [Acinetobacter sp. DR1] Length = 180 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 116 LTPDFELG---------EYVRQ--DLVYEKENL 137 >gi|317050575|ref|YP_004111691.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfurispirillum indicum S5] gi|316945659|gb|ADU65135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurispirillum indicum S5] Length = 260 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 9 CILCKHTDCVEVCPVD--CFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTE 60 C C CV CPV+ Y+ +N + +H + CI CG+C+ CP D + Sbjct: 63 CNHCTDAPCVTACPVNPKAMYKKDNGITMHNEARCIGCGMCQSACPYTVASLDAD 117 >gi|288934133|ref|YP_003438192.1| glutamate synthase, small subunit [Klebsiella variicola At-22] gi|288888862|gb|ADC57180.1| glutamate synthase, small subunit [Klebsiella variicola At-22] Length = 660 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 8 NCILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 N I C+H + CV CP D + + + + ++CI C C CP ++ P Sbjct: 52 NAITCRHCEDAPCVRSCPNDAIAQSGDSVQVSQEKCIGCKSCMVACPFGVMQVVVTP 108 >gi|262376770|ref|ZP_06069998.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter lwoffii SH145] gi|262308480|gb|EEY89615.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter lwoffii SH145] Length = 180 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 MTPDFELG 123 >gi|260448069|gb|ACX38491.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|315137485|dbj|BAJ44644.1| conserved hypothetical protein [Escherichia coli DH1] Length = 162 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVVSGENP 161 >gi|313126882|ref|YP_004037152.1| NADH-quinone oxidoreductase, chain i [Halogeometricum borinquense DSM 11551] gi|312293247|gb|ADQ67707.1| NADH-quinone oxidoreductase, chain I [Halogeometricum borinquense DSM 11551] Length = 153 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVQDDQRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|171463232|ref|YP_001797345.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192770|gb|ACB43731.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 228 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK--- 56 + ++ + CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 87 VAFIDPKKCIGC--TLCIQACPVDAIVGASKQMHVVLSDWCTGCNLCIPPCPVDCISMID 144 Query: 57 -PDTEPGLELWLKINSEYATQ 76 + G + W + +++A + Sbjct: 145 VTGGQTGWDAWSQDLADFARK 165 >gi|304405130|ref|ZP_07386790.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9] gi|304346009|gb|EFM11843.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9] Length = 121 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ N CI C+ CV+VCP + F G + D+C C +CE CPVDA+ Sbjct: 1 MIELVSANRCIGCQL--CVKVCPTNVFDMAGMLPVIARQDDCQTCFMCEAYCPVDALY-- 56 Query: 59 TEPGLELWLKINSE 72 P E+ + ++ E Sbjct: 57 VAPQAEVSVAVDEE 70 >gi|289191573|ref|YP_003457514.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938023|gb|ADC68778.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 62 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEV---CPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LCK +C E CP++ F EG+ + ++C CGVCE CP A+K + E Sbjct: 9 LCKGAECAECVNNCPMEVFEIEGDRVVVAREEDCTYCGVCEDVCPTGAVKVEPE 62 >gi|254520090|ref|ZP_05132146.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913839|gb|EEH99040.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 634 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y VT++CI C T C+ CPV + I+ D+CI CG+C CP AI Sbjct: 572 VKYEVTDSCIGC--TKCLRACPVLAIKGKIREKHIINIDKCIRCGLCYEACPTKAI 625 >gi|218780619|ref|YP_002431937.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfatibacillum alkenivorans AK-01] gi|218762003|gb|ACL04469.1| Putative uncharacterized protein (contains partial HdrA and MvhD domains) [Desulfatibacillum alkenivorans AK-01] Length = 532 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V + C +C C CP Y + I C CG+C ECP DAI+ Sbjct: 333 FVDVDKCTVC--LTCYRCCPHGAIYWDSRAI-IAESACQGCGICASECPNDAIQ 383 >gi|149912662|ref|ZP_01901196.1| iron-sulfur cluster-binding protein [Roseobacter sp. AzwK-3b] gi|149813068|gb|EDM72894.1| iron-sulfur cluster-binding protein [Roseobacter sp. AzwK-3b] Length = 259 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDAAEGV 138 >gi|332280430|ref|ZP_08392843.1| 4Fe-4S binding protein [Shigella sp. D9] gi|332102782|gb|EGJ06128.1| 4Fe-4S binding protein [Shigella sp. D9] Length = 163 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMISIQSLPGDTRQQI 115 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 116 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 162 >gi|262275677|ref|ZP_06053486.1| tetrathionate reductase subunit B [Grimontia hollisae CIP 101886] gi|262219485|gb|EEY70801.1| tetrathionate reductase subunit B [Grimontia hollisae CIP 101886] Length = 255 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATYQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|256827540|ref|YP_003151499.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256583683|gb|ACU94817.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 299 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C CV VCP Y +G + D+CI C C CP D + + Sbjct: 79 RSCMHCTDAACVNVCPSGSLYHDPDGTGLVIYDVDKCIGCQYCRSACPFDVPRHTGIGVV 138 Query: 64 ELWLKIN 70 +KIN Sbjct: 139 GGGIKIN 145 >gi|154150816|ref|YP_001404434.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999368|gb|ABS55791.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 128 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T C+ C C+ +CP + F ++ + LAI D CI CG C P CP A+ Sbjct: 74 VNTSECVDCGA--CISICPREVFSFDTDWKLAIAEDRCIVCGKCVPACPHSAL 124 >gi|160899678|ref|YP_001565260.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160365262|gb|ABX36875.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Delftia acidovorans SPH-1] Length = 281 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 136 LCNHCDNPPCVPVCPVQATFQRSDGIVLVDNERCVGCGYCVQACPYDA 183 >gi|120405062|ref|YP_954891.1| putative glutamate synthase (NADPH) small subunit [Mycobacterium vanbaalenii PYR-1] gi|119957880|gb|ABM14885.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 543 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 NC C C+ CP D + G+ + D+C C VC +CPV AI+ EP Sbjct: 489 NCFECD--GCLGACPEDAVIKLGVGQRY-RFDYDKCTGCAVCADQCPVHAIEMFGEP 542 >gi|75906350|ref|YP_320646.1| 4Fe-4S ferredoxin [Anabaena variabilis ATCC 29413] gi|75700075|gb|ABA19751.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anabaena variabilis ATCC 29413] Length = 383 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C ++CP ++ +NF + +C CG C P CP D I Sbjct: 116 CEKICPAQAIVFNHQKDNFSGVESQKCYGCGRCLPVCPYDII 157 >gi|325957816|ref|YP_004289282.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329248|gb|ADZ08310.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 368 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ E C C C + CPV F + AI+ D+CI C C CP + IK + + Sbjct: 190 IINEGCNSCGR--CADSCPVSAFEISKAGAAINYDKCIACNNCLGACPDELIKLNWST-M 246 Query: 64 ELWLKINSEYA 74 E +++ +EYA Sbjct: 247 EEFIERMTEYA 257 >gi|167748568|ref|ZP_02420695.1| hypothetical protein ANACAC_03341 [Anaerostipes caccae DSM 14662] gi|167651882|gb|EDR96011.1| hypothetical protein ANACAC_03341 [Anaerostipes caccae DSM 14662] Length = 416 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTE 60 + TE+C C + C C D E + L+I PD+C CGVC C +D + D Sbjct: 50 IHTESCESCAYDRACKNSCIFDAIEEVDGKLSIDPDKCSGCGVCIESCRLDKLAESKDIF 109 Query: 61 PGL--------ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P L +++ I + Q+ N + + L SA K G K E Sbjct: 110 PVLKEVRSEEKDVYALIAPAFVGQYENASPGQ--LRSALKAAGFKGMVE 156 >gi|117618050|ref|YP_856311.1| NADH dehydrogenase subunit I [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|156632700|sp|A0KJ60|NUOI_AERHH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|117559457|gb|ABK36405.1| NADH-quinone oxidoreductase chain i [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 180 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|120599742|ref|YP_964316.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120559835|gb|ABM25762.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 234 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 2 TYVVTENCILCKHTD---CVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 TY+ T LC H D CV+VCP ++ + L + + DECI C C CP I Sbjct: 51 TYIPT----LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISF 106 Query: 58 DTEPGLELW 66 +T W Sbjct: 107 NTATPHRRW 115 >gi|315651297|ref|ZP_07904325.1| Fe-hydrogenase large subunit family protein [Eubacterium saburreum DSM 3986] gi|315486449|gb|EFU76803.1| Fe-hydrogenase large subunit family protein [Eubacterium saburreum DSM 3986] Length = 507 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C EVCP + F +I+ ++CI CG C C +AI T P Sbjct: 117 VTNGCQGCLAHPCAEVCPTGAVKIDKESGFSSINQEKCIKCGRCANVCAYNAIIIQTRP 175 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 13/105 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT------- 59 N I+ + C C +D EN A I D+C+ CG C CP AI + Sbjct: 167 NAIIIQTRPCAASCGMDAISSDENGKADIDYDKCVSCGQCLVNCPFGAISDKSQIFQTIR 226 Query: 60 --EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ I + Q+ P +T K L +A K G +E Sbjct: 227 AIQSGERVYAAIAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|312136493|ref|YP_004003830.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] gi|311224212|gb|ADP77068.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] Length = 128 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 10 ILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I C H D C+ +CP D + + I D+CI CG C CPV AI D E GL Sbjct: 33 IFCLHCDPKNAPCLNICPSDAIKSINDAIVIDRDKCIGCGSCVNVCPVGAIFLD-ERGL 90 >gi|310642487|ref|YP_003947245.1| glutamate synthase family, small subunit, putative [Paenibacillus polymyxa SC2] gi|309247437|gb|ADO57004.1| Glutamate synthase family, small subunit, putative [Paenibacillus polymyxa SC2] Length = 209 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 3/88 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TYV + C C++ C CPV + + + I D CI C C CP AI + P Sbjct: 79 TYVPVQ-CRHCENAPCAHACPVQAIRQEDGVVMIDEDRCIGCTSCVLACPFGAI--EVSP 135 Query: 62 GLELWLKINSEYATQWPNITTKKESLPS 89 I T N T + S Sbjct: 136 VYRAGHVITQSGLTHRANRTALPRTAAS 163 >gi|255011300|ref|ZP_05283426.1| putative hydrogenase [Bacteroides fragilis 3_1_12] gi|313149111|ref|ZP_07811304.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137878|gb|EFR55238.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 489 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D CI CG C CP AI Sbjct: 112 VNYEITNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 >gi|239624842|ref|ZP_04667873.1| anaerobic dimethyl sulfoxide reductase [Clostridiales bacterium 1_7_47_FAA] gi|239521228|gb|EEQ61094.1| anaerobic dimethyl sulfoxide reductase [Clostridiales bacterium 1_7_47FAA] Length = 215 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---CIDCGVCEPECPVDA 54 M Y + +C C CV+ CP Y+ + + + +E CI CG C+ CP +A Sbjct: 78 MRYNMNISCNHCSKPACVDACPTGRIYKEDTYGIVLANEEIPCISCGRCQKACPWEA 134 >gi|254509840|ref|ZP_05121907.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533551|gb|EEE36539.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 238 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 69 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWSCPYGARELDQAEGV 127 >gi|188584735|ref|YP_001916280.1| Fe-S cluster domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349422|gb|ACB83692.1| Fe-S cluster domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 460 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E+CI C H C++ CP I + CIDCG C CP +A +++ + Sbjct: 13 ESCIGCVH--CLKFCPTQAIRIKGGRAEILKERCIDCGGCIQICPNNAKIAESD-NISQI 69 Query: 67 LKINSEYATQWPNITTK--KESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + A P++ + K+ LP + ++K FS + GG+ Sbjct: 70 DNFQHKVAVVPPSVLVQFPKDVLPKEVFRAFLDLGFDKVFSISLGGE 116 >gi|154502471|ref|ZP_02039531.1| hypothetical protein RUMGNA_00284 [Ruminococcus gnavus ATCC 29149] gi|153796867|gb|EDN79287.1| hypothetical protein RUMGNA_00284 [Ruminococcus gnavus ATCC 29149] Length = 506 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP I ++CI CG C+ CP DAI P Sbjct: 119 YEVSNMCKGCLAHPCSEVCPKGAISMVNGKSYIDQEKCIKCGKCKAVCPYDAIAKKERP 177 >gi|319425621|gb|ADV53695.1| respiratory arsenate reductase, FeS subunit, ArrB [Shewanella putrefaciens 200] Length = 234 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 2 TYVVTENCILCKHTD---CVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 TY+ T LC H D CV+VCP ++ + L + + DECI C C CP I Sbjct: 51 TYIPT----LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISF 106 Query: 58 DTEPGLELW 66 +T W Sbjct: 107 NTATPHRRW 115 >gi|116695680|ref|YP_841256.1| sulfite reductase alpha subunit (flavoprotein) [Ralstonia eutropha H16] gi|113530179|emb|CAJ96526.1| sulfite reductase alpha subunit (flavoprotein) [Ralstonia eutropha H16] Length = 383 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPV N + + C C C P CP AI Sbjct: 19 CIRC--NSCEESCPVGAITHDHNNYVVDVERCNHCRACLPPCPTGAI 63 >gi|77360047|ref|YP_339622.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis TAC125] gi|76874958|emb|CAI86179.1| Electron transport complex protein rnfB [Pseudoalteromonas haloplanktis TAC125] Length = 184 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|45359028|ref|NP_988585.1| hypothetical protein MMP1465 [Methanococcus maripaludis S2] gi|45047903|emb|CAF31021.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 252 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 YV + CI C+ C E+CPVD E ++ I P++C+ C +C CPV AI + Sbjct: 42 YVESNKCIRCEL--CYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAI--NVL 97 Query: 61 PGLELWLKINSEYATQWPNITTKKESL 87 G + N Y + ++T +K L Sbjct: 98 EGRAKLEEDNVVYELKEIDVTHRKIRL 124 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 NC++C E+CPV + + + CI CG CE CPV AI Sbjct: 203 NCMVCS-----EICPVGAIVYEDGLMKLDDKMCIFCGKCEKNCPVTAI 245 >gi|45359255|ref|NP_988812.1| polyferredoxin, associated with F420-non-reducing hydrogenase [Methanococcus maripaludis S2] gi|45048130|emb|CAF31248.1| polyferredoxin, associated with F420-non-reducing hydrogenase [Methanococcus maripaludis S2] Length = 383 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 18/112 (16%) Query: 8 NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CVE+CP + E I P E C+ CGVC PECPVDAI Sbjct: 78 HCVLCEK--CVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAI 135 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + ++ I +Q T ++ A K+ +QK K F+ N Sbjct: 136 SIEDIAVIDTDKCIYCTVCSQ----TCPWNAIFVAGKLPQKRQKTIKSFTVN 183 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI---------K 56 E CI C+ CVE CP Y GE P+ C CG+C CPV+ I K Sbjct: 185 EECIGCEK--CVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAK 242 Query: 57 PDTEPGLELWLKINSEY 73 P T+ GL +W + Y Sbjct: 243 PVTDEGL-VWSEEKCAY 258 >gi|305665372|ref|YP_003861659.1| putative iron-sulfur protein [Maribacter sp. HTCC2170] gi|88710127|gb|EAR02359.1| probable iron-sulfur protein [Maribacter sp. HTCC2170] Length = 472 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI CK CV VCP + L ECI+C C EC K D GL Sbjct: 268 DCIDCKQ--CVHVCPTNIDIRNGTQL-----ECINCTACIDECDAIMEKIDKPKGL---- 316 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDG 95 YA++ + TKKE ++ G Sbjct: 317 ---IRYASE--DEITKKEKFKFTPRLKG 339 >gi|127511541|ref|YP_001092738.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636836|gb|ABO22479.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 190 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C++ CV VCP Y G++ ++I D+C+ C C CP V I P+T+ Sbjct: 59 SCQQCENAPCVTVCPTGAAYVGDDGLVSIKEDKCVGCMYCVAACPYKVRFINPETK 114 >gi|332086808|gb|EGI91944.1| hydrogenase-4 component A [Shigella boydii 5216-82] Length = 162 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVQALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|326387453|ref|ZP_08209062.1| NADH dehydrogenase subunit I [Novosphingobium nitrogenifigens DSM 19370] gi|326208109|gb|EGD58917.1| NADH dehydrogenase subunit I [Novosphingobium nitrogenifigens DSM 19370] Length = 161 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDA+ Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAEPRDDGSRRTTRYDIDMTKCIFCGFCQEACPVDAVV 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EYAT+ T++E L AK+ K+E+ + N Sbjct: 118 EGP----------NFEYATE-----TREELLYDKAKLLANGDKWERAIAAN 153 >gi|299131979|ref|ZP_07025174.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298592116|gb|EFI52316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 252 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ + + ++ D CI C +C CP A + D + G+ Sbjct: 78 RSCLHCEEPACVTVCPTGASYKRTEDGIVLVNADTCIGCKLCSWACPYGAREFDEDDGV 136 >gi|262165101|ref|ZP_06032838.1| ferredoxin [Vibrio mimicus VM223] gi|262172136|ref|ZP_06039814.1| ferredoxin [Vibrio mimicus MB-451] gi|261893212|gb|EEY39198.1| ferredoxin [Vibrio mimicus MB-451] gi|262024817|gb|EEY43485.1| ferredoxin [Vibrio mimicus VM223] Length = 46 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 25/38 (65%) Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++++N+E A WPN+T K ++ AAK DGV K + Sbjct: 5 RIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKLD 42 >gi|256829504|ref|YP_003158232.1| FAD linked oxidase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578680|gb|ACU89816.1| FAD linked oxidase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 937 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 33 LAIHP--DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 L HP D C+DCG CEP CP I + W +I Sbjct: 532 LTSHPKIDMCVDCGFCEPVCPSRHIAFTPRQRIAAWREI 570 >gi|187251160|ref|YP_001875642.1| hydrogenase large subunit domain-containing protein [Elusimicrobium minutum Pei191] gi|186971320|gb|ACC98305.1| Hydrogenase large subunit domain protein [Elusimicrobium minutum Pei191] Length = 482 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C +VCP + ++ E I +C++CG+C CP AI P Sbjct: 91 YEVTAACRGCIAHRCEQVCPKNAISFDHEQKAHIDKTKCVECGLCAKVCPFSAILSYKRP 150 >gi|227831507|ref|YP_002833287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|229580456|ref|YP_002838856.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|229580894|ref|YP_002839293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284999058|ref|YP_003420826.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457955|gb|ACP36642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|228011172|gb|ACP46934.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011610|gb|ACP47371.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446954|gb|ADB88456.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 89 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 V T+ C+ CK C +VCP + + + +H + C++CG CP AIK Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIIVHYERCLECGAALVACPYGAIK 76 >gi|150402795|ref|YP_001330089.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033825|gb|ABR65938.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 481 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 12/64 (18%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 VTENCILC +C+ CP D E F + E CI+CG+C +CP +A+ Sbjct: 225 VTENCILC--GNCITKCPKD-VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL 281 Query: 56 KPDT 59 + +T Sbjct: 282 RFET 285 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ENC + + C+EVCP + +G+ F CI CG C ECP AIK + Sbjct: 11 TYEECENCKNKEISKCMEVCPTNAIKMIDGKAF------SCITCGTCAKECPTGAIKKNE 64 Query: 60 EPGLELWLKI 69 G + K+ Sbjct: 65 YGGYYVNRKL 74 >gi|15669380|ref|NP_248188.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|41018414|sp|Q58593|VHUB_METJA RecName: Full=Polyferredoxin protein vhuB gi|1591821|gb|AAB99195.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 394 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E CI C CVEVCP D + EN + I P C C +C CPVDA Sbjct: 205 VNAEKCIYC--LKCVEVCPGDMIKVDEENLIVIPPKSCPACKLCVNICPVDA-------- 254 Query: 63 LELWLKINSEY 73 L+L +K++S + Sbjct: 255 LDLEVKLSSPH 265 >gi|191166000|ref|ZP_03027836.1| 4Fe-4S binding protein [Escherichia coli B7A] gi|256019317|ref|ZP_05433182.1| putative oxidoreductase [Shigella sp. D9] gi|309793956|ref|ZP_07688381.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|190903948|gb|EDV63661.1| 4Fe-4S binding protein [Escherichia coli B7A] gi|308122363|gb|EFO59625.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] Length = 162 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMISIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|320182216|gb|EFW57119.1| putative oxidoreductase, Fe-S subunit [Shigella boydii ATCC 9905] Length = 162 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVQALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|282849346|ref|ZP_06258731.1| putative ferredoxin [Veillonella parvula ATCC 17745] gi|282581050|gb|EFB86448.1| putative ferredoxin [Veillonella parvula ATCC 17745] Length = 65 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG+ I CI CG C CPV A+K Sbjct: 4 LKFNIDDTCVKCGA--CAEDCPVQCITEGKTQFIIGKG-CIGCGDCYSICPVGAVK 56 >gi|242309040|ref|ZP_04808195.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] gi|239524464|gb|EEQ64330.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] Length = 83 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEKCIACDA--CREECPNEAIEEGDPYYIIDPERCTECYGFYDEPACLSVCPVDA 58 Query: 55 I--KPDTEPGLE 64 I PD LE Sbjct: 59 IVSDPDNIESLE 70 >gi|218782788|ref|YP_002434106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764172|gb|ACL06638.1| MvH Hase/Heterodisulfide reductase, subunit A-like protein [Desulfatibacillum alkenivorans AK-01] Length = 1021 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 VTE+C C CV+VCP E+ + + P C CGVC CP D + Sbjct: 938 VTEHCDGCAL--CVDVCPYRAIRLQESTGEDGRMHRMIQVDPALCKGCGVCAATCPKDGV 995 Query: 56 K 56 + Sbjct: 996 R 996 >gi|218887556|ref|YP_002436877.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758510|gb|ACL09409.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 188 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 C C++ C+E CPV + + E+ + +H D CI CG C CP A K Sbjct: 59 CNHCENPVCLEQCPVKAYTKREDGIVVHDQDACIGCGNCVRSCPYGAPK 107 >gi|239618161|ref|YP_002941483.1| Ferredoxin hydrogenase [Kosmotoga olearia TBF 19.5.1] gi|239506992|gb|ACR80479.1| Ferredoxin hydrogenase [Kosmotoga olearia TBF 19.5.1] Length = 478 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 17 CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 CV C V Y EN F+ I ++C+ CG C CP AI + G ++ +++ E Sbjct: 177 CVSACAVGATYSDENGFVLIDDEKCVQCGECAVACPFGAIVESSSIG-QVAVRLGKE 232 >gi|218781349|ref|YP_002432667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762733|gb|ACL05199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 369 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C C C +VCPV + I CI CG C CP AI PD + Sbjct: 190 VNKEKCTGC--GSCEDVCPVGAAKLEDEISIIDAKVCIGCGECMTVCPEKAINPDWATDI 247 Query: 64 ELWLKINSEYA 74 +++ +EYA Sbjct: 248 GAFMERMTEYA 258 >gi|46201176|ref|ZP_00208000.1| COG1144: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Magnetospirillum magnetotacticum MS-1] Length = 80 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E + + D C CG+C ECP AIK Sbjct: 26 ERCVKC--ATCWLYCPVQCVVEKAAWFDFNYDFCKGCGICAEECPHRAIK 73 >gi|89894374|ref|YP_517861.1| hypothetical protein DSY1628 [Desulfitobacterium hafniense Y51] gi|219668800|ref|YP_002459235.1| electron transfer flavoprotein alpha/beta-subunit [Desulfitobacterium hafniense DCB-2] gi|89333822|dbj|BAE83417.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539060|gb|ACL20799.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfitobacterium hafniense DCB-2] Length = 428 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 18/110 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++ CI C CV CP + G++ + + +C +CG C CP + + Sbjct: 1 MAVIIGPGCISCGL--CVGECPSEALELGDSGVVVDAGKCTECGDCVSVCPSNILS---- 54 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 L + + + P T+ + S P+A K EK +P PGG Sbjct: 55 ------LPEGAGKSAEEPKQTSTEPS-PAAP-----GAKVEKKAAPVPGG 92 >gi|330835139|ref|YP_004409867.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567278|gb|AEB95383.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 488 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 9 CILCKHTDCVEVCPVD------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ CK DC + CPV F + F A +C+ G C +CP D I Sbjct: 419 CLSCKTVDCAKACPVGLTDMRASFIKKGEFKAF---KCVGAGECIEDCPYDNI 468 >gi|261252304|ref|ZP_05944877.1| NrfC protein [Vibrio orientalis CIP 102891] gi|260935695|gb|EEX91684.1| NrfC protein [Vibrio orientalis CIP 102891] Length = 229 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H D+C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKDKCVGCGYCLAACP 143 >gi|257453944|ref|ZP_05619220.1| ferredoxin [Enhydrobacter aerosaccus SK60] gi|257448609|gb|EEV23576.1| ferredoxin [Enhydrobacter aerosaccus SK60] Length = 87 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC--GVCEPECPVDAIKPD 58 M ++T+ CI C C +CP D Y GE I P C +C EP+C + PD Sbjct: 1 MALIITDECINCDV--CEPLCPNDAIYVGELIYEIDPALCTECVGHFDEPQCSLFCPVPD 58 Query: 59 TEPGLELWLKINSEYATQWPNITTKKES 86 P +L+ ++ ++ IT K S Sbjct: 59 CIPKDPNYLETPAQLLLKFERITQTKTS 86 >gi|257094088|ref|YP_003167729.1| putative glutamate synthase (NADPH) small subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046612|gb|ACV35800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 540 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC C +C VCP + + N + D C CG+C ECP AIK + E Sbjct: 486 NCFECD--NCYGVCPDNAVIKLGPGNRFQFNYDYCKGCGMCVAECPCGAIKMEAE 538 >gi|257064870|ref|YP_003144542.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792523|gb|ACV23193.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 296 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVD 53 C+ C CV+VCP ++ E ++ + D+CI C C CP D Sbjct: 80 CMHCTDAGCVQVCPSGALFKDEETGLVSYNKDKCIGCKYCAAACPFD 126 >gi|126664349|ref|ZP_01735333.1| D-lactate dehydrogenase, putative [Marinobacter sp. ELB17] gi|126630675|gb|EBA01289.1| D-lactate dehydrogenase, putative [Marinobacter sp. ELB17] Length = 938 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSNGLSLSPRQRIVIWRDIQAK 572 >gi|121997517|ref|YP_001002304.1| RnfABCDGE type electron transport complex subunit C [Halorhodospira halophila SL1] gi|121588922|gb|ABM61502.1| electron transport complex, RnfABCDGE type, C subunit [Halorhodospira halophila SL1] Length = 681 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C+ CPVD + + + DEC C +C CP+D I Sbjct: 102 VAFIDESQCIGC--TRCLPACPVDAIVGAQRQVHTVLADECTGCRLCVDACPMDCI 155 >gi|88859826|ref|ZP_01134465.1| electron transport complex protein RnfB [Pseudoalteromonas tunicata D2] gi|88817820|gb|EAR27636.1| electron transport complex protein RnfB [Pseudoalteromonas tunicata D2] Length = 184 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|317470826|ref|ZP_07930207.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316901653|gb|EFV23586.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 416 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTE 60 + TE+C C + C C D E + L+I PD+C CGVC C +D + D Sbjct: 50 IHTESCESCAYDRACKNSCIFDAIEEVDGKLSIDPDKCSGCGVCIESCRLDKLAESKDIF 109 Query: 61 PGL--------ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 P L +++ I + Q+ N + + L SA K G K E Sbjct: 110 PVLKEVRSEEKDVYALIAPAFVGQYENASPGQ--LRSALKAAGFKGMVE 156 >gi|269139126|ref|YP_003295827.1| putative oxidoreductase Fe-S binding subunit [Edwardsiella tarda EIB202] gi|267984787|gb|ACY84616.1| putative oxidoreductase Fe-S binding subunit [Edwardsiella tarda EIB202] Length = 678 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +LC+H + C VCP + + + + ++CI C C CP AI+ T+ Sbjct: 54 LLCRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIEVITQ 107 >gi|52424976|ref|YP_088113.1| electron transport complex protein RnfB [Mannheimia succiniciproducens MBEL55E] gi|52307028|gb|AAU37528.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 196 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKP-D 58 + ++ + CI C T C++ CPVD L + PD C C +C CP D IK Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIIGTNKSLHTVIPDLCTGCELCVAPCPTDCIKMIK 162 Query: 59 TEPGLELW-LKINSEYATQWPNITTKKESL 87 E ++ W K+N + N T ++ L Sbjct: 163 VEKNIDNWDWKVNPDLVIPVMNTTDGEKKL 192 >gi|114567968|ref|YP_755122.1| ferredoxin-type protein NapH [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338903|gb|ABI69751.1| conserved protein, putative ferredoxin-type protein NapH [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 281 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF-----LAIHPDECIDCGVCEPECPVD 53 + +++ I+ C +CP+ +Y N L I P++CIDCG C CPV+ Sbjct: 181 VLFLILFLSIIYFRPFCRSLCPLGAYYALFNRVSWWRLEIKPEDCIDCGCCSQVCPVE 238 >gi|116625966|ref|YP_828122.1| hydrogenase 2 protein HybA [Candidatus Solibacter usitatus Ellin6076] gi|116229128|gb|ABJ87837.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 317 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVD 53 V + C+ C CV+ CP+ +G++ +A + ++CI C C+ CP + Sbjct: 115 VKQQCMHCVDPSCVQACPLSALTKGDHGIVAWNGNQCIGCRCCQLSCPFN 164 >gi|328948664|ref|YP_004366001.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] gi|328448988|gb|AEB14704.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] Length = 56 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ +CI C C CP + E + I+ D C+ CG C CPV AI + Sbjct: 1 MAYKISSDCINCGA--CEGECPSEAISEVNDKRQINADNCVSCGSCASVCPVGAISEE 56 >gi|324005536|gb|EGB74755.1| 4Fe-4S binding domain protein [Escherichia coli MS 57-2] Length = 162 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREKGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|210615651|ref|ZP_03290697.1| hypothetical protein CLONEX_02915 [Clostridium nexile DSM 1787] gi|210150194|gb|EEA81203.1| hypothetical protein CLONEX_02915 [Clostridium nexile DSM 1787] Length = 263 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 CI CK C +VCP D +N I P++C +CG+C +CP Sbjct: 217 GCIGCKM--CQKVCPSDAIVVEDNIAHIDPEKCTNCGLCAEKCP 258 >gi|169634174|ref|YP_001707910.1| NADH dehydrogenase subunit I [Acinetobacter baumannii SDF] gi|169797051|ref|YP_001714844.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AYE] gi|184157036|ref|YP_001845375.1| NADH dehydrogenase subunit I [Acinetobacter baumannii ACICU] gi|239501287|ref|ZP_04660597.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB900] gi|260551026|ref|ZP_05825231.1| NADH-quinone oxidoreductase subunit I [Acinetobacter sp. RUH2624] gi|260555657|ref|ZP_05827877.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter baumannii ATCC 19606] gi|301347787|ref|ZP_07228528.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB056] gi|301510622|ref|ZP_07235859.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB058] gi|301595907|ref|ZP_07240915.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB059] gi|332852140|ref|ZP_08433967.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013150] gi|332867539|ref|ZP_08437692.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013113] gi|332872611|ref|ZP_08440579.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6014059] gi|156632697|sp|A3M2Q5|NUOI_ACIBT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737380|sp|B2HU48|NUOI_ACIBC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737381|sp|B0VU49|NUOI_ACIBS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737382|sp|B0V894|NUOI_ACIBY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|169149978|emb|CAM87872.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter baumannii AYE] gi|169152966|emb|CAP02012.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter baumannii] gi|183208630|gb|ACC56028.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Acinetobacter baumannii ACICU] gi|193076541|gb|ABO11199.2| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii ATCC 17978] gi|260405974|gb|EEW99461.1| NADH-quinone oxidoreductase subunit I [Acinetobacter sp. RUH2624] gi|260410568|gb|EEX03866.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter baumannii ATCC 19606] gi|332729512|gb|EGJ60851.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013150] gi|332733956|gb|EGJ65101.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013113] gi|332739140|gb|EGJ69999.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6014059] Length = 180 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 116 LTPDFELG---------EYVRQ--DLVYEKENL 137 >gi|15678427|ref|NP_275542.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2621461|gb|AAB84905.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 341 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 CI CK C++ CPVD E + + + CI CG C +CPV Sbjct: 132 CIRCKK--CMKACPVDAITEKDGRVEVDQGRCIACGECLEKCPV 173 >gi|397906|emb|CAA48368.1| NADH dehydrogenase I, subunit nuoI [Escherichia coli] Length = 179 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 114 Query: 57 --PDTEPG 62 PD E G Sbjct: 115 LTPDFEMG 122 >gi|212634995|ref|YP_002311520.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212556479|gb|ACJ28933.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 230 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C CV+VCP Y+ + L + D+CI C C CP I + + W Sbjct: 53 CNHCSDAACVKVCPTGAMYKDKRGLTLQDNDKCIGCRKCMRACPYGVISYNKQKPHRKWQ 112 Query: 68 KINS--EYATQWPNITTKK 84 + E AT P + KK Sbjct: 113 DDQALLEGATASPYMLLKK 131 >gi|152971209|ref|YP_001336318.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895798|ref|YP_002920534.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae NTUH-K2044] gi|262043321|ref|ZP_06016450.1| NADH-quinone oxidoreductase subunit I [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330003563|ref|ZP_08304678.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. MS 92-3] gi|150956058|gb|ABR78088.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548116|dbj|BAH64467.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039345|gb|EEW40487.1| NADH-quinone oxidoreductase subunit I [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536903|gb|EGF63202.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. MS 92-3] Length = 180 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFELG 123 >gi|219849153|ref|YP_002463586.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] gi|219543412|gb|ACL25150.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] Length = 477 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V ++C C +CVE CP D + + C CG C CP DA++ Sbjct: 353 VLDSCRQCSVGAECVEACPEDAIERVDTGALRITNRCTGCGECVTACPYDAVQ 405 >gi|91200370|emb|CAJ73416.1| strongly similar to NADH dehydrogenase I chain I [Candidatus Kuenenia stuttgartiensis] Length = 171 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC F I+ CI CG CE CP AI+ Sbjct: 49 ERCVGCYL--CAAVCPVDCISLQATEDEYGRRYPEFFRINFSRCIFCGFCEDACPTYAIQ 106 Query: 57 --PDTE 60 PD E Sbjct: 107 LVPDFE 112 >gi|294053608|ref|YP_003547266.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Coraliomargarita akajimensis DSM 45221] gi|293612941|gb|ADE53096.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Coraliomargarita akajimensis DSM 45221] Length = 309 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ + C C + CV+VCPV+ + E + +A+ + CI C CE CP A + Sbjct: 157 SFYMPVQCQQCDNPPCVDVCPVEATWKEKDGIVAVDYNWCIGCRYCEAACPYHARR 212 >gi|237752866|ref|ZP_04583346.1| ferredoxin [Helicobacter winghamensis ATCC BAA-430] gi|229375133|gb|EEO25224.1| ferredoxin [Helicobacter winghamensis ATCC BAA-430] Length = 83 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEECIACDA--CREECPNEAIEEGDPYYIIDPERCTECFGFYDEPACLSVCPVDA 58 Query: 55 I--KPDTEPGLE 64 I PD LE Sbjct: 59 IISDPDNVESLE 70 >gi|262203359|ref|YP_003274567.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086706|gb|ACY22674.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 111 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDA--IK 56 + V+ + CI C CV CP + F +G + + + +C C +CE CP DA + Sbjct: 2 IELVLADACIACDK--CVLACPTNVFDQGTDGIPVIARQSDCQTCFMCEAYCPTDALYVS 59 Query: 57 PDTEPGLELW 66 PD+ P E + Sbjct: 60 PDSAPADESF 69 >gi|224418757|ref|ZP_03656763.1| hypothetical protein HcanM9_05713 [Helicobacter canadensis MIT 98-5491] gi|253826716|ref|ZP_04869601.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Helicobacter canadensis MIT 98-5491] gi|313142273|ref|ZP_07804466.1| polysulfide reductase chain B [Helicobacter canadensis MIT 98-5491] gi|253510122|gb|EES88781.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Helicobacter canadensis MIT 98-5491] gi|313131304|gb|EFR48921.1| polysulfide reductase chain B [Helicobacter canadensis MIT 98-5491] Length = 189 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 V +C +C+HT CV VCP F + + + I ++C+ C C CP +A Sbjct: 55 VRHSCEMCEHTPCVTVCPTHASFMDEDGIVDIDANKCVGCLYCVVACPYNA 105 >gi|224367281|ref|YP_002601444.1| Fdx3 [Desulfobacterium autotrophicum HRM2] gi|223689997|gb|ACN13280.1| Fdx3 [Desulfobacterium autotrophicum HRM2] Length = 179 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 28/62 (45%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C+ + C +VCPV+ + N + + + C+ C C CP AI P L Sbjct: 56 QCRHCEDSPCAQVCPVNAIIQKGNHIDVIDELCVGCKSCVLACPFGAISVTERPALGAGF 115 Query: 68 KI 69 ++ Sbjct: 116 RL 117 >gi|254242172|ref|ZP_04935494.1| hypothetical protein PA2G_02903 [Pseudomonas aeruginosa 2192] gi|126195550|gb|EAZ59613.1| hypothetical protein PA2G_02903 [Pseudomonas aeruginosa 2192] Length = 774 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC +VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCAQVCPVSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCP 419 >gi|227329116|ref|ZP_03833140.1| nitrite reductase complex component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 223 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C H CV+VCP Y + ++PD C+ C C CP V I P T+ Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDATNGIVDVNPDLCVGCQYCIAACPYQVRFIHPKTK 147 >gi|217076475|ref|YP_002334191.1| dihydroorotate dehydrogenase family protein [Thermosipho africanus TCF52B] gi|217036328|gb|ACJ74850.1| dihydroorotate dehydrogenase family protein [Thermosipho africanus TCF52B] Length = 360 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C LCK C +VCP + + + P++C CG+CE CPV AI Sbjct: 311 EKCTLCKI--CEKVCPYFAITI-DTKVHVDPNKCFGCGLCESRCPVKAI 356 >gi|221135173|ref|ZP_03561476.1| electron transport complex protein RnfB [Glaciecola sp. HTCC2999] Length = 193 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREAECIGC--TKCIQACPVDAIIGASKQMHTVIVDECTGCDLCVAPCPVDCI 159 >gi|78042697|ref|YP_360602.1| ferredoxin [Carboxydothermus hydrogenoformans Z-2901] gi|77994812|gb|ABB13711.1| ferredoxin [Carboxydothermus hydrogenoformans Z-2901] Length = 54 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +TE C+ C C++ CP + EG+ + D C +CG C CPV AI Sbjct: 1 MAYRITEECLACG--TCMDSCPHNAIVEGDIYKI--TDACQNCGTCAEACPVGAI 51 >gi|15602588|ref|NP_245660.1| TTRB [Pasteurella multocida subsp. multocida str. Pm70] gi|12721017|gb|AAK02807.1| TtrB [Pasteurella multocida subsp. multocida str. Pm70] Length = 245 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ ++ + + +E CI C C CP DA Sbjct: 98 LCNHCDNPPCVPVCPVQATYQRKDGIVVVDNERCIGCAYCVQACPYDA 145 >gi|150389275|ref|YP_001319324.1| cobyrinic acid a,c-diamide synthase [Alkaliphilus metalliredigens QYMF] gi|149949137|gb|ABR47665.1| Cobyrinic acid a,c-diamide synthase [Alkaliphilus metalliredigens QYMF] Length = 286 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 17/89 (19%) Query: 19 EVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELW------- 66 ++C +C ++ NF + P C CGVCE CPV A+ KP+ L L+ Sbjct: 73 DLCRENCRFDAINFDDGYHVDPFVCEGCGVCEELCPVGAVSLKPEKAGDLMLYKEDVVFS 132 Query: 67 ---LKINSEYATQWPNITTKKESLPSAAK 92 LK+ S T +T K+S+ SAA+ Sbjct: 133 RAQLKMGS--GTSGMLVTEVKKSMKSAAE 159 >gi|157156854|ref|YP_001463806.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] gi|157078884|gb|ABV18592.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] Length = 205 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ + CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNENLCIGCKLCAVVCPFGAIS 98 >gi|222823215|ref|YP_002574788.1| ferredoxin [Campylobacter lari RM2100] gi|222538436|gb|ACM63537.1| ferredoxin [Campylobacter lari RM2100] Length = 81 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T CI C C E CP + Y+ + I PD C +C C CPVD Sbjct: 1 MSLLITRECISCDA--CREECPDEAIYDNDPIYVIDPDLCTECVNEFSEPACIVACPVDC 58 Query: 55 IKPD---TEPGLELWLK 68 I PD E EL LK Sbjct: 59 IIPDPDNVESIDELRLK 75 >gi|89109665|ref|AP_003445.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. W3110] gi|90111508|ref|NP_417362.4| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. MG1655] gi|157154983|ref|YP_001464223.1| 4Fe-4S binding protein [Escherichia coli E24377A] gi|170018868|ref|YP_001723822.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|170680835|ref|YP_001745038.1| 4Fe-4S binding protein [Escherichia coli SMS-3-5] gi|193063562|ref|ZP_03044651.1| 4Fe-4S binding protein [Escherichia coli E22] gi|194426426|ref|ZP_03058981.1| 4Fe-4S binding protein [Escherichia coli B171] gi|218555434|ref|YP_002388347.1| putative oxidoreductase [Escherichia coli IAI1] gi|218696481|ref|YP_002404148.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli 55989] gi|238902011|ref|YP_002927807.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BW2952] gi|256024605|ref|ZP_05438470.1| putative oxidoreductase [Escherichia sp. 4_1_40B] gi|260845553|ref|YP_003223331.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O103:H2 str. 12009] gi|260857008|ref|YP_003230899.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O26:H11 str. 11368] gi|260869562|ref|YP_003235964.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O111:H- str. 11128] gi|293449208|ref|ZP_06663629.1| oxidoreductase [Escherichia coli B088] gi|300815664|ref|ZP_07095888.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300820688|ref|ZP_07100839.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300906566|ref|ZP_07124257.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300947605|ref|ZP_07161777.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300954276|ref|ZP_07166739.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|301027818|ref|ZP_07191123.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|301303042|ref|ZP_07209169.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301327285|ref|ZP_07220541.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|301643766|ref|ZP_07243804.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|307139572|ref|ZP_07498928.1| putative oxidoreductase [Escherichia coli H736] gi|307310496|ref|ZP_07590144.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|331669619|ref|ZP_08370465.1| putative electron transport protein YgfS [Escherichia coli TA271] gi|331684510|ref|ZP_08385102.1| putative electron transport protein YgfS [Escherichia coli H299] gi|6920085|sp|Q46819|YGFS_ECOLI RecName: Full=Putative electron transport protein ygfS gi|85675698|dbj|BAE76951.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K12 substr. W3110] gi|87082179|gb|AAC75924.2| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. MG1655] gi|157077013|gb|ABV16721.1| 4Fe-4S binding protein [Escherichia coli E24377A] gi|169753796|gb|ACA76495.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|170518553|gb|ACB16731.1| 4Fe-4S binding protein [Escherichia coli SMS-3-5] gi|192930839|gb|EDV83444.1| 4Fe-4S binding protein [Escherichia coli E22] gi|194415734|gb|EDX32001.1| 4Fe-4S binding protein [Escherichia coli B171] gi|218353213|emb|CAU99126.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli 55989] gi|218362202|emb|CAQ99820.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli IAI1] gi|238862761|gb|ACR64759.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BW2952] gi|257755657|dbj|BAI27159.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O26:H11 str. 11368] gi|257760700|dbj|BAI32197.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O103:H2 str. 12009] gi|257765918|dbj|BAI37413.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O111:H- str. 11128] gi|291322298|gb|EFE61727.1| oxidoreductase [Escherichia coli B088] gi|299879080|gb|EFI87291.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|300318737|gb|EFJ68521.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300401605|gb|EFJ85143.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300452802|gb|EFK16422.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300526952|gb|EFK48021.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300531593|gb|EFK52655.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300841706|gb|EFK69466.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|300846148|gb|EFK73908.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|301077865|gb|EFK92671.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|306909391|gb|EFN39886.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309703246|emb|CBJ02581.1| putative oxidoreductase, 4Fe-4S subunit [Escherichia coli ETEC H10407] gi|315062189|gb|ADT76516.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli W] gi|315256767|gb|EFU36735.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|315614960|gb|EFU95598.1| hydrogenase-4 component A [Escherichia coli 3431] gi|320202544|gb|EFW77114.1| putative oxidoreductase, Fe-S subunit [Escherichia coli EC4100B] gi|323154765|gb|EFZ40963.1| hydrogenase-4 component A [Escherichia coli EPECa14] gi|323162525|gb|EFZ48375.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323167911|gb|EFZ53601.1| hydrogenase-4 component A [Shigella sonnei 53G] gi|323173882|gb|EFZ59511.1| hydrogenase-4 component A [Escherichia coli LT-68] gi|323180328|gb|EFZ65880.1| hydrogenase-4 component A [Escherichia coli 1180] gi|323183438|gb|EFZ68835.1| hydrogenase-4 component A [Escherichia coli 1357] gi|323377227|gb|ADX49495.1| putative oxidoreductase, Fe-S subunit [Escherichia coli KO11] gi|323935883|gb|EGB32182.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323941594|gb|EGB37774.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323946629|gb|EGB42652.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324119926|gb|EGC13805.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|331063287|gb|EGI35200.1| putative electron transport protein YgfS [Escherichia coli TA271] gi|331078125|gb|EGI49331.1| putative electron transport protein YgfS [Escherichia coli H299] Length = 162 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|74313444|ref|YP_311863.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|209920340|ref|YP_002294424.1| putative oxidoreductase [Escherichia coli SE11] gi|254037929|ref|ZP_04871987.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331643574|ref|ZP_08344705.1| putative electron transport protein YgfS [Escherichia coli H736] gi|331678870|ref|ZP_08379544.1| putative electron transport protein YgfS [Escherichia coli H591] gi|887836|gb|AAA83067.1| ORF_f163 [Escherichia coli] gi|73856921|gb|AAZ89628.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|209913599|dbj|BAG78673.1| putative oxidoreductase [Escherichia coli SE11] gi|226839553|gb|EEH71574.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331037045|gb|EGI09269.1| putative electron transport protein YgfS [Escherichia coli H736] gi|331073700|gb|EGI45021.1| putative electron transport protein YgfS [Escherichia coli H591] Length = 163 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 109 >gi|315126995|ref|YP_004068998.1| electron transport complex protein RnfB [Pseudoalteromonas sp. SM9913] gi|315015509|gb|ADT68847.1| electron transport complex protein RnfB [Pseudoalteromonas sp. SM9913] Length = 184 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|294338873|emb|CAZ87210.1| BoxA (Benzoyl-CoA oxygenase component A) [Thiomonas sp. 3As] Length = 424 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV N + D+C C C P CP AI Sbjct: 17 EICIRC--NTCEATCPVGAITHDANNYVVDADKCNFCMACVPPCPTGAI 63 >gi|224371828|ref|YP_002605992.1| Glutamate synthase [Desulfobacterium autotrophicum HRM2] gi|223694545|gb|ACN17828.1| Glutamate synthase [Desulfobacterium autotrophicum HRM2] Length = 544 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 30/83 (36%) Query: 7 ENCILCKHTDCVEVCPV---------------------------DCFYEGENFLAIHPDE 39 + C LC C VCPV D FY + I + Sbjct: 26 DRCTLCGQ--CTAVCPVQAIELAVFRKRNLVTSIHRVEDNRSTFDTFYGIKQKTTI-AEA 82 Query: 40 CIDCGVCEPECPVDAIKPDTEPG 62 CI C +C CP DAI+P+ PG Sbjct: 83 CIGCAMCSMVCPNDAIEPNPHPG 105 >gi|197123586|ref|YP_002135537.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196173435|gb|ACG74408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 273 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 ++ V + C C+ T C++VCPV Y + + + + CI C C CP + + P+ Sbjct: 139 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGVVLVDGERCIGCAYCVQACPFGSRFLSPE 198 Query: 59 TE 60 T Sbjct: 199 TH 200 >gi|118591778|ref|ZP_01549174.1| iron-sulfur cluster-binding protein [Stappia aggregata IAM 12614] gi|118435771|gb|EAV42416.1| iron-sulfur cluster-binding protein [Stappia aggregata IAM 12614] Length = 654 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C LC CV +CP E + L D C+ CG+C CP A+ D P L+L Sbjct: 506 CTLC--LSCVSLCPSGALKENPDAPQLRFQEDACLQCGICTTICPEKALSLD--PRLDL 560 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 LC H T C+++CP + +++ C CG C CP AI D P Sbjct: 271 LCAHSRARKTGCTRCLDLCPTGAITPDGDHVSVDTMVCAGCGSCSAVCPSGAISYDAPPV 330 Query: 63 LELWLKINSEYATQWPNITTKKESL 87 + ++ + AT W +++ L Sbjct: 331 SNTFQRLQTLAAT-WRKLSSDSPRL 354 >gi|94448907|emb|CAJ44288.1| NADH dehydrogenase (ubiquinone) [Heliobacillus mobilis] Length = 846 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 17 CVEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CV+VCPV GE AI CI CG C +CPV I + E Sbjct: 800 CVKVCPVKAI-SGEIRKTPFAIDAKLCIACGACAQKCPVHVIAQEGE 845 >gi|78185994|ref|YP_374037.1| hypothetical protein Plut_0104 [Chlorobium luteolum DSM 273] gi|78165896|gb|ABB22994.1| hypothetical protein Plut_0104 [Chlorobium luteolum DSM 273] Length = 83 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/20 (75%), Positives = 16/20 (80%) Query: 38 DECIDCGVCEPECPVDAIKP 57 D CI CG CEPECPV+AI P Sbjct: 28 DTCIMCGACEPECPVNAISP 47 >gi|46200681|ref|ZP_00207795.1| COG0369: Sulfite reductase, alpha subunit (flavoprotein) [Magnetospirillum magnetotacticum MS-1] Length = 393 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPVD ++G N++ + D+C C C CP AI Sbjct: 14 CIRC--NTCEEACPVDAITHDGTNYV-VSFDKCTGCRTCVSPCPTGAI 58 >gi|331696235|ref|YP_004332474.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326950924|gb|AEA24621.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 286 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP E+ + + D C CG C P CP I D PG Sbjct: 105 SDVCKHCTHAACLDVCPTGSLIRTEHGTVLVQEDICNGCGYCIPACPYGVI--DQRPG 160 >gi|307353080|ref|YP_003894131.1| FAD dependent oxidoreductase [Methanoplanus petrolearius DSM 11571] gi|307156313|gb|ADN35693.1| FAD dependent oxidoreductase [Methanoplanus petrolearius DSM 11571] Length = 428 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 20/76 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH------------------PDECIDCG 44 YV E C C DC EVCPV+ + + L + P+ CIDCG Sbjct: 98 YVDAELCNGC--GDCYEVCPVEVYNRYDAGLGVRKAIYKPHAQIVPNLAIRDPEHCIDCG 155 Query: 45 VCEPECPVDAIKPDTE 60 +C C +A++ D E Sbjct: 156 LCYDVCGREAVRHDDE 171 >gi|300717644|ref|YP_003742447.1| NADH dehydrogenase I chain I [Erwinia billingiae Eb661] gi|299063480|emb|CAX60600.1| NADH dehydrogenase I chain I [Erwinia billingiae Eb661] Length = 180 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|222625883|gb|EEE60015.1| hypothetical protein OsJ_12764 [Oryza sativa Japonica Group] Length = 815 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 714 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 770 >gi|304314560|ref|YP_003849707.1| energy-converting hydrogenase A, subunit P [Methanothermobacter marburgensis str. Marburg] gi|5734542|emb|CAB52771.1| polyferredoxin [Methanothermobacter thermautotrophicus] gi|302588019|gb|ADL58394.1| energy-converting hydrogenase A, subunit P [Methanothermobacter marburgensis str. Marburg] Length = 340 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 CI C+ C++ CPVD E + + I CI CG C +CPV Sbjct: 132 CIRCRK--CMKACPVDAIVEEDGRVEIDQSRCIACGDCLEKCPV 173 >gi|50083956|ref|YP_045466.1| NADH dehydrogenase subunit I [Acinetobacter sp. ADP1] gi|81393674|sp|Q6FE64|NUOI_ACIAD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|49529932|emb|CAG67644.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter sp. ADP1] Length = 180 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 116 MTPDFELG---------EYVRQ--DLVYEKENL 137 >gi|327400634|ref|YP_004341473.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316142|gb|AEA46758.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 243 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V + C C++ CV VCPV Y ++ + + ++CI CG C CP A E Sbjct: 109 YFVPKLCNQCENAPCVAVCPVGATYMTDDGVVLVDYEKCIGCGYCVSACPYGARYLYPED 168 Query: 62 GLELWLK 68 G +++ Sbjct: 169 GESEYMR 175 >gi|303327686|ref|ZP_07358126.1| periplasmic [Fe] hydrogenase, large subunit [Desulfovibrio sp. 3_1_syn3] gi|302862047|gb|EFL84981.1| periplasmic [Fe] hydrogenase, large subunit [Desulfovibrio sp. 3_1_syn3] Length = 418 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C C E CP Y G +P+ CI+CG C CP A+ Sbjct: 30 VDAEKCIGCD--TCQEYCPSGAIYGETGAAHEVAYPEACINCGQCLTHCPEFAV 81 >gi|292494297|ref|YP_003533440.1| molybdopterin oxidoreductase [Haloferax volcanii DS2] gi|291369264|gb|ADE01494.1| molybdopterin oxidoreductase [Haloferax volcanii DS2] Length = 273 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 M+Y T C C + CV+VCPV+ Y E+ + I D+CI C C CP +A Sbjct: 64 MSYQPTA-CQHCDNAPCVKVCPVNATYTREDGIVEIDYDKCIGCRYCMAACPYNA 117 >gi|289191767|ref|YP_003457708.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938217|gb|ADC68972.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 163 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%) Query: 17 CVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 C+E+CPVD ++ F+ I ++C+ CG C+ CP +AI Sbjct: 45 CIEICPVDAITYSKDGLFIVIDKEKCVFCGRCKKVCPTNAI 85 >gi|323966686|gb|EGB62118.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327251647|gb|EGE63333.1| hydrogenase-4 component A [Escherichia coli STEC_7v] Length = 162 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|320161182|ref|YP_004174406.1| NAD-reducing hydrogenase subunit [Anaerolinea thermophila UNI-1] gi|319995035|dbj|BAJ63806.1| NAD-reducing hydrogenase subunit [Anaerolinea thermophila UNI-1] Length = 594 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +TY +V E C C T C CPV+ E I PD C+ CG+C C +AI Sbjct: 537 ITYEIVPETCTGC--TVCARNCPVNAITGERRQPHKIDPDICVRCGICMQVCNFNAI 591 >gi|331660380|ref|ZP_08361315.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] gi|331052647|gb|EGI24683.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] Length = 205 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|269963964|ref|ZP_06178273.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio harveyi 1DA3] gi|269831307|gb|EEZ85457.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio harveyi 1DA3] Length = 249 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 162 >gi|222873278|gb|EEF10409.1| predicted protein [Populus trichocarpa] Length = 238 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK------PDTEP 61 CI C T C++ CP D F+ + C C +C P CPVD I+ P T Sbjct: 92 CIGC--TLCIKACPTDAILGANKFMHTVIAAHCTGCELCIPVCPVDCIELHNASGPAT-- 147 Query: 62 GLELWLKINSEYATQ 76 G W +E+A Q Sbjct: 148 GWSAWSPQQAEHARQ 162 >gi|254173494|ref|ZP_04880166.1| RNase L inhibitor [Thermococcus sp. AM4] gi|214032186|gb|EEB73016.1| RNase L inhibitor [Thermococcus sp. AM4] Length = 589 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENYRPVIQEASCTGCGICVHKCPFNAI 66 >gi|150400807|ref|YP_001324573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013510|gb|ABR55961.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 250 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI-KPDTEPGLELW 66 E ++ I PD+CI C +C ECPVDAI KP E+ Sbjct: 36 SEKYICIVPDDCIRCNLCYIECPVDAITKPTVRKPAEII 74 >gi|332999463|gb|EGK19048.1| formate hydrogenlyase subunit 6 [Shigella flexneri VA-6] Length = 180 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLKIN 70 L +W K N Sbjct: 96 YELAVWKKEN 105 >gi|332998146|gb|EGK17750.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri VA-6] Length = 223 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C+H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCEHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|325661153|ref|ZP_08149780.1| hypothetical protein HMPREF0490_00513 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472660|gb|EGC75871.1| hypothetical protein HMPREF0490_00513 [Lachnospiraceae bacterium 4_1_37FAA] Length = 263 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 + V + CI C+ C +VCP D N I P++C +CG C +CP Sbjct: 210 VMAVCSTGCIGCRM--CQKVCPADAIVVENNLAWIDPEKCTNCGACAEKCP 258 >gi|315925914|ref|ZP_07922119.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620735|gb|EFV00711.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 222 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + V E CI C+ +C VCP C I + C+ CG C CPV I+ Sbjct: 148 FFVGEGCIGCR--NCSVVCPQSCIDSSSIPAVIDQNRCLHCGRCAEACPVGVIE 199 >gi|269967076|ref|ZP_06181144.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio alginolyticus 40B] gi|269828335|gb|EEZ82601.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio alginolyticus 40B] Length = 249 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 162 >gi|157962175|ref|YP_001502209.1| electron transport complex protein RnfB [Shewanella pealeana ATCC 700345] gi|189043389|sp|A8H537|RNFB_SHEPA RecName: Full=Electron transport complex protein rnfB gi|157847175|gb|ABV87674.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella pealeana ATCC 700345] Length = 189 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|332140733|ref|YP_004426471.1| electron transport complex protein RnfB [Alteromonas macleodii str. 'Deep ecotype'] gi|327550755|gb|AEA97473.1| electron transport complex protein RnfB [Alteromonas macleodii str. 'Deep ecotype'] Length = 193 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 110 VAFIREDECIGC--TKCIQACPVDAILGAAKHMHTVITDECTGCDLCVDPCPVDCI 163 >gi|113474436|ref|YP_720497.1| 4Fe-4S ferredoxin, iron-sulfur binding [Trichodesmium erythraeum IMS101] gi|110165484|gb|ABG50024.1| 4Fe-4S ferredoxin, iron-sulfur binding [Trichodesmium erythraeum IMS101] Length = 75 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 15 TDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 DC CPV C + +G ++ + D CIDCG+C CPV+ A+ + P L+ Sbjct: 14 ADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVEKAVLAEERPELQ 71 >gi|315425450|dbj|BAJ47114.1| ABC transporter ATP-binding protein [Candidatus Caldiarchaeum subterraneum] Length = 595 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 12 CKHTDCVEVCP-----VDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 C + C+ CP ++ GE+ F I CI CG+C +CP +AI Sbjct: 20 CGNWPCITYCPPVRNNIEAIKMGEDGFPIISETLCISCGICVKKCPFEAI 69 >gi|264676201|ref|YP_003276107.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni CNB-2] gi|262206713|gb|ACY30811.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni CNB-2] Length = 433 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHD 40 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRC--NTCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 >gi|196232899|ref|ZP_03131749.1| molybdopterin oxidoreductase [Chthoniobacter flavus Ellin428] gi|196223098|gb|EDY17618.1| molybdopterin oxidoreductase [Chthoniobacter flavus Ellin428] Length = 1259 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIH-PDECIDCGVCEPECPVD 53 VT C C C+E CPV + + E + H D+CI C C +CP D Sbjct: 112 VTTACHHCVEPACLEGCPVMAYDKDAETGIVRHLDDQCIGCQYCILKCPYD 162 >gi|158520140|ref|YP_001528010.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508966|gb|ABW65933.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 325 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M V E C C DCV CPV E+ + I C+ CG+C +CP +A++ D Sbjct: 205 MPVVKKEACKKC--MDCVNRCPVKAISHQEDTITIDMGLCLGCGICTEKCPHEAMELVVD 262 Query: 59 TE 60 TE Sbjct: 263 TE 264 >gi|118474172|ref|YP_891448.1| ferredoxin [Campylobacter fetus subsp. fetus 82-40] gi|118413398|gb|ABK81818.1| ferredoxin [Campylobacter fetus subsp. fetus 82-40] Length = 83 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++T++CI C C E CP + YE + I PD C +C C CPVD Sbjct: 1 MSLMITKDCISCDA--CREECPDEAIYEDDPTYMIDPDRCSECISDYAEPACIVICPVDC 58 Query: 55 IKPD---TEPGLELWLK 68 I PD E EL LK Sbjct: 59 IVPDPDNIETPEELKLK 75 >gi|121607275|ref|YP_995082.1| RnfABCDGE type electron transport complex subunit B [Verminephrobacter eiseniae EF01-2] gi|121551915|gb|ABM56064.1| electron transport complex, RnfABCDGE type, B subunit [Verminephrobacter eiseniae EF01-2] Length = 220 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + ++ + CI C T C++VCP D + I C C +C P CPVD I DT Sbjct: 85 VAFIDEDWCIGC--TLCLKVCPTDAIVGASKMMHTIIERYCTGCELCLPVCPVDCIALDT 142 Query: 60 EPG 62 G Sbjct: 143 ASG 145 >gi|332097983|gb|EGJ02956.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 155-74] Length = 184 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|49081734|gb|AAT50267.1| PA2644 [synthetic construct] Length = 183 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 LTPDFEMG 125 >gi|66047114|ref|YP_236955.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae B728a] gi|63257821|gb|AAY38917.1| Electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae B728a] Length = 291 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + +EC C +C CPVD I+ Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGAAKLMHTVIINECTGCDLCIAPCPVDCIE 137 >gi|57642012|ref|YP_184490.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] gi|57160336|dbj|BAD86266.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] Length = 166 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECP 51 NC C+ C+EVCP + Y +G+ + + P +CI C +C CP Sbjct: 47 NCRHCEKAPCLEVCPTNALYRDGDGAVLLAPQKCIGCLMCGIVCP 91 >gi|238919824|ref|YP_002933339.1| glutamate synthase family, small subunit, [Edwardsiella ictaluri 93-146] gi|238869393|gb|ACR69104.1| glutamate synthase family, small subunit, putative [Edwardsiella ictaluri 93-146] Length = 678 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +LC+H + C VCP + + + + ++CI C C CP AI+ T+ Sbjct: 54 LLCRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIEVITQ 107 >gi|160899056|ref|YP_001564638.1| RnfABCDGE type electron transport complex subunit B [Delftia acidovorans SPH-1] gi|160364640|gb|ABX36253.1| electron transport complex, RnfABCDGE type, B subunit [Delftia acidovorans SPH-1] Length = 238 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK------PDTEP 61 CI C T C++ CP D F+ + C C +C P CPVD I+ P T Sbjct: 92 CIGC--TLCIKACPTDAILGANKFMHTVIAAHCTGCELCIPVCPVDCIELHNASGPAT-- 147 Query: 62 GLELWLKINSEYATQ 76 G W +E+A Q Sbjct: 148 GWSAWSPQQAEHARQ 162 >gi|121594763|ref|YP_986659.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222110623|ref|YP_002552887.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120606843|gb|ABM42583.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221730067|gb|ACM32887.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 260 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 115 LCNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDA 162 >gi|86159508|ref|YP_466293.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776019|gb|ABC82856.1| tetrathionate reductase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 274 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 ++ V + C C+ T C++VCPV Y + + + + CI C C CP + + P+ Sbjct: 140 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGVVLVDGERCIGCAYCVQACPFGSRFLSPE 199 Query: 59 TE 60 T Sbjct: 200 TH 201 >gi|333006115|gb|EGK25625.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-272] gi|333018950|gb|EGK38243.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-227] Length = 205 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|331654382|ref|ZP_08355382.1| putative electron transport protein YgfS [Escherichia coli M718] gi|331047764|gb|EGI19841.1| putative electron transport protein YgfS [Escherichia coli M718] Length = 163 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 115 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 116 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 162 >gi|299531136|ref|ZP_07044548.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni S44] gi|298720839|gb|EFI61784.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni S44] Length = 433 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHD 40 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRC--NTCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 >gi|299532215|ref|ZP_07045609.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] gi|298719877|gb|EFI60840.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] Length = 250 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 104 LCNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDA 151 >gi|294140408|ref|YP_003556386.1| NADH dehydrogenase I subunit I [Shewanella violacea DSS12] gi|293326877|dbj|BAJ01608.1| NADH dehydrogenase I, I subunit [Shewanella violacea DSS12] Length = 184 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 16/67 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF-----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC +E + F I+ CI CG CE CP AI Sbjct: 62 ERCVACNL--CSVACPVDCISVEKTEKPDGRWEAKTF-TINFSRCIMCGFCEEACPTHAI 118 Query: 56 K--PDTE 60 + PD E Sbjct: 119 QLTPDFE 125 >gi|255322208|ref|ZP_05363354.1| methyl-accepting chemotaxis sensory transducer [Campylobacter showae RM3277] gi|255300581|gb|EET79852.1| methyl-accepting chemotaxis sensory transducer [Campylobacter showae RM3277] Length = 246 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C C++ C++VCP Y+ N + ++ ECI C +C CP A Sbjct: 95 CNHCENPACIDVCPTGASYQRSNGIVKVNSAECIGCALCAEACPYHA 141 >gi|161502534|ref|YP_001569646.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863881|gb|ABX20504.1| hypothetical protein SARI_00578 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|323130652|gb|ADX18082.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326628528|gb|EGE34871.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 190 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 68 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 125 Query: 57 --PDTEPG 62 PD E G Sbjct: 126 LTPDFELG 133 >gi|11498235|ref|NP_069461.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649992|gb|AAB90612.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 340 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 P++ E +LA + D CI CGVCE CP +AI Sbjct: 265 PIESLLEKSRYLAYVDEDMCIACGVCEERCPFEAI 299 >gi|84385415|ref|ZP_00988447.1| tetrathionate reductase, subunit B [Vibrio splendidus 12B01] gi|84380012|gb|EAP96863.1| tetrathionate reductase, subunit B [Vibrio splendidus 12B01] Length = 278 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D C++VCPV ++ E+ + + +E C+ C C CP DA Sbjct: 111 LCNHCDNAPCIKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 158 >gi|238798700|ref|ZP_04642173.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia mollaretii ATCC 43969] gi|238717457|gb|EEQ09300.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia mollaretii ATCC 43969] Length = 205 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CV CP ++ E + ++PD C+ C CE CP A + D Sbjct: 58 FNYYLSIACNHCSFPTCVTGCPTGAMHKREEDGLVVVNPDLCVGCRYCEMRCPYGAPQFD 117 Query: 59 TEPGL 63 + L Sbjct: 118 AKTKL 122 >gi|15597840|ref|NP_251334.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PAO1] gi|107102164|ref|ZP_01366082.1| hypothetical protein PaerPA_01003214 [Pseudomonas aeruginosa PACS2] gi|116050631|ref|YP_790550.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa UCBPP-PA14] gi|152984090|ref|YP_001347926.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PA7] gi|218891195|ref|YP_002440061.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa LESB58] gi|254235626|ref|ZP_04928949.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa C3719] gi|254241074|ref|ZP_04934396.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 2192] gi|296388895|ref|ZP_06878370.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PAb1] gi|313107683|ref|ZP_07793865.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 39016] gi|81783693|sp|Q9I0J4|NUOI_PSEAE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|122259754|sp|Q02ND6|NUOI_PSEAB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|166918795|sp|A6V4E1|NUOI_PSEA7 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737408|sp|B7VAQ8|NUOI_PSEA8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|9948713|gb|AAG06032.1|AE004693_3 NADH Dehydrogenase I chain I [Pseudomonas aeruginosa PAO1] gi|115585852|gb|ABJ11867.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa UCBPP-PA14] gi|126167557|gb|EAZ53068.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa C3719] gi|126194452|gb|EAZ58515.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 2192] gi|150959248|gb|ABR81273.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa PA7] gi|218771420|emb|CAW27187.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa LESB58] gi|310880367|gb|EFQ38961.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 39016] Length = 182 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 LTPDFEMG 125 >gi|304382390|ref|ZP_07364890.1| ferredoxin [Prevotella marshii DSM 16973] gi|304336452|gb|EFM02688.1| ferredoxin [Prevotella marshii DSM 16973] Length = 259 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C C VCP+ +GE + H D+CI C C CPV AI Sbjct: 190 VNNERCIRCGR--CATVCPMQNITGGKGEKPIWHHTDDCISCFACYHGCPVHAI 241 >gi|302348066|ref|YP_003815704.1| Ferredoxin like protein [Acidilobus saccharovorans 345-15] gi|302328478|gb|ADL18673.1| Ferredoxin like protein [Acidilobus saccharovorans 345-15] Length = 101 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C+ +CP C+ + + + C++CG C CP+DAI Sbjct: 38 KCEKCPAKPCIYLCPAGCYTLAGDRIVFSYEGCVECGTCRVICPMDAI 85 >gi|260768415|ref|ZP_05877349.1| iron-sulfur cluster-binding protein [Vibrio furnissii CIP 102972] gi|260616445|gb|EEX41630.1| iron-sulfur cluster-binding protein [Vibrio furnissii CIP 102972] Length = 553 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + L +C+ CG+C CP +A+ Sbjct: 417 TTDCTLC--MSCVAVCPTRALHHEGDLPSLKFVEQDCVQCGLCVKACPENAL 466 >gi|261821988|ref|YP_003260094.1| cytochrome C nitrite reductase, Fe-S protein [Pectobacterium wasabiae WPP163] gi|261606001|gb|ACX88487.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium wasabiae WPP163] Length = 223 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYQVRFIHPQTK 147 >gi|119873466|ref|YP_931473.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674874|gb|ABL89130.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 285 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL---ELWLKINSEY 73 CV+ CP Y ++ P C+ CGVC CP P + E + IN Sbjct: 23 CVDACPAGALYVDGRWVKAEPSLCVGCGVCMSACPTGVFTAQLGPYISCREGGVCINGLR 82 Query: 74 ATQWPNITTKKESLPSAAKMD 94 A + + K + A+ D Sbjct: 83 AEDYVKLVEKYGEITVDARCD 103 >gi|34498747|ref|NP_902962.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34104598|gb|AAQ60956.1| Electron transport complex protein [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + ++CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 78 LAVIREDSCIGC--TLCIQACPVDAIVGAAKQMHTVIADECTGCELCLAPCPVDCI 131 >gi|15679814|ref|NP_276932.1| hypothetical protein MTH1826 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622960|gb|AAB86292.1| unknown (contains ferredoxin domain) [Methanothermobacter thermautotrophicus str. Delta H] Length = 367 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+T +C LC CVE CPV+ E+ + I DECI C C CP + + E + Sbjct: 189 VITGDCNLCGV--CVEDCPVEAITLTEDGVKIEYDECIACMNCMDSCPNEVYDLNWEDDV 246 Query: 64 ELWLKINSEYA 74 +++ EY+ Sbjct: 247 PAFIERMMEYS 257 >gi|331085092|ref|ZP_08334178.1| hypothetical protein HMPREF0987_00481 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407875|gb|EGG87365.1| hypothetical protein HMPREF0987_00481 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 263 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 + V + CI C+ C +VCP D N I P++C +CG C +CP Sbjct: 210 VMAVCSTGCIGCRM--CQKVCPADAIVVENNLAWIDPEKCTNCGACAEKCP 258 >gi|323978273|gb|EGB73359.1| dimethylsulfoxide reductase [Escherichia coli TW10509] Length = 205 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|182419411|ref|ZP_02950663.1| iron-dependent hydrogenase [Clostridium butyricum 5521] gi|237666562|ref|ZP_04526547.1| ferredoxin hydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376742|gb|EDT74314.1| iron-dependent hydrogenase [Clostridium butyricum 5521] gi|237657761|gb|EEP55316.1| ferredoxin hydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 495 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C VC I +C +CG+C+ CP DAI D P Sbjct: 104 FEVTDACRNCIAHKCQSVCNFGAISYVNGRAHIDTTKCKECGMCKKACPYDAIAQDMRP 162 >gi|157163871|ref|YP_001467642.1| ubiquinol cytochrome c oxidoreductase, cytochrome b subunit [Campylobacter concisus 13826] gi|157101373|gb|ABV23503.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter concisus 13826] Length = 183 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +T +C C C++VCPV + + EN + +H D+CI CG C CP +I Sbjct: 55 ITHSCHHCDEPACMDVCPVGAYIKLENGVVQPLH-DKCIGCGYCLMACPYGSI 106 >gi|82777863|ref|YP_404212.1| hydrogenase 4 Fe-S subunit [Shigella dysenteriae Sd197] gi|81242011|gb|ABB62721.1| hydrogenase 4 Fe-S subunit [Shigella dysenteriae Sd197] Length = 218 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|329898086|ref|ZP_08272295.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC3088] gi|328920958|gb|EGG28383.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC3088] Length = 198 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 112 VAYIHEDECIGC--TKCIQACPVDAILGAAKLMHTVIASECTGCDLCVEPCPVDCI 165 >gi|326562847|gb|EGE13135.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 103P14B1] gi|326577018|gb|EGE26913.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 101P30B1] Length = 182 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 118 LTPDFELG---------EYDRQ--NLVYEKEHL 139 >gi|320656571|gb|EFX24467.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 162 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|299143765|ref|ZP_07036845.1| iron-sulfur cluster-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518250|gb|EFI41989.1| iron-sulfur cluster-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 316 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C + CP D + +N I +CI+CG+C +CP AI Sbjct: 216 GCIACKL--CEKNCPKDAIHVVDNLARIDYTKCINCGICVSKCPTGAI 261 >gi|291284206|ref|YP_003501024.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. CB9615] gi|293416139|ref|ZP_06658779.1| electron transporter ygfS [Escherichia coli B185] gi|290764079|gb|ADD58040.1| Putative electron transport protein ygfS [Escherichia coli O55:H7 str. CB9615] gi|291432328|gb|EFF05310.1| electron transporter ygfS [Escherichia coli B185] gi|320662090|gb|EFX29491.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. USDA 5905] Length = 162 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|222444427|ref|ZP_03606942.1| hypothetical protein METSMIALI_00038 [Methanobrevibacter smithii DSM 2375] gi|261351023|ref|ZP_05976440.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] gi|222433992|gb|EEE41157.1| hypothetical protein METSMIALI_00038 [Methanobrevibacter smithii DSM 2375] gi|288860363|gb|EFC92661.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] Length = 456 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 18/28 (64%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 GE + I+PD C+ CG C CP DAIK Sbjct: 121 GEAYSVINPDTCVRCGYCFRVCPTDAIK 148 >gi|204930526|ref|ZP_03221456.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320460|gb|EDZ05663.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 185 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 57 CNHCEHPACVAACPVEAYTKCEDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|218778463|ref|YP_002429781.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759847|gb|ACL02313.1| Sulfite reduction-associated complex , DsrO [Desulfatibacillum alkenivorans AK-01] Length = 271 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Query: 5 VTENCIL-----CKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPD 58 VT+N +L C++ CV VCP ++ E+ + I CI C C CP + + Sbjct: 124 VTQNEVLVLCNQCENPACVRVCPTKATFQREDGIVIMDFHRCIGCRFCMAACPYGSRSFN 183 Query: 59 TEPGLELWLKINSEYATQWPNITTK 83 + L+IN E+ T+ + K Sbjct: 184 FKDPRIASLEINPEFPTRMKGVVEK 208 >gi|145591167|ref|YP_001153169.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282935|gb|ABP50517.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 188 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C++ CV VCP Y+ + + I P+ CI C C CP +A D G Sbjct: 58 LLLVQCQHCENAPCVIVCPTGASYKDVDGLVKIKPELCIGCKYCMVACPYEARWLDERTG 117 Query: 63 L 63 L Sbjct: 118 L 118 >gi|118466276|ref|YP_879707.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium avium 104] gi|118167563|gb|ABK68460.1| 4Fe-4S binding domain protein [Mycobacterium avium 104] Length = 330 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 16/97 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 131 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE------ 184 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + + YAT ++ PS + GV QK Sbjct: 185 ----RRNDGTYATP-----AQRPDRPSEEIVTGVAQK 212 >gi|41406467|ref|NP_959303.1| hypothetical protein MAP0369 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394816|gb|AAS02686.1| hypothetical protein MAP_0369 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 324 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 16/97 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 125 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE------ 178 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + + YAT ++ PS + GV QK Sbjct: 179 ----RRNDGTYATP-----AQRPDRPSEEIVTGVAQK 206 >gi|157162346|ref|YP_001459664.1| 4Fe-4S binding protein [Escherichia coli HS] gi|188491838|ref|ZP_02999108.1| 4Fe-4S binding protein [Escherichia coli 53638] gi|194436779|ref|ZP_03068879.1| 4Fe-4S binding protein [Escherichia coli 101-1] gi|253772274|ref|YP_003035105.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|293412244|ref|ZP_06654967.1| 4Fe-4S ferredoxin [Escherichia coli B354] gi|297516963|ref|ZP_06935349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli OP50] gi|300925135|ref|ZP_07141049.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|312972874|ref|ZP_07787047.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|157068026|gb|ABV07281.1| 4Fe-4S binding protein [Escherichia coli HS] gi|188487037|gb|EDU62140.1| 4Fe-4S binding protein [Escherichia coli 53638] gi|194424261|gb|EDX40248.1| 4Fe-4S binding protein [Escherichia coli 101-1] gi|242378418|emb|CAQ33197.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BL21(DE3)] gi|253323318|gb|ACT27920.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|291469015|gb|EFF11506.1| 4Fe-4S ferredoxin [Escherichia coli B354] gi|300418737|gb|EFK02048.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|310332816|gb|EFQ00030.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|323960818|gb|EGB56439.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323971677|gb|EGB66906.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] gi|332344780|gb|AEE58114.1| hydrogenase-4 component A [Escherichia coli UMNK88] Length = 162 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|193070563|ref|ZP_03051502.1| 4Fe-4S binding protein [Escherichia coli E110019] gi|192956146|gb|EDV86610.1| 4Fe-4S binding protein [Escherichia coli E110019] Length = 162 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|260598698|ref|YP_003211269.1| NADH dehydrogenase subunit I [Cronobacter turicensis z3032] gi|260217875|emb|CBA32420.1| NADH-quinone oxidoreductase subunit I [Cronobacter turicensis z3032] Length = 211 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 89 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 146 Query: 57 --PDTEPG 62 PD E G Sbjct: 147 LTPDFELG 154 >gi|262203451|ref|YP_003274659.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086798|gb|ACY22766.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 333 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ C C H C++VCP + E + I D C CG C CP ++ Sbjct: 130 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVIQDDVCNGCGTCVAGCPFGVVE 183 >gi|153001066|ref|YP_001366747.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|151365684|gb|ABS08684.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] Length = 181 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C+ C++ C+ VCP ++ + + + ++C CG+C CP DA+ + G Sbjct: 57 LSHACMHCENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYDAVSIREDDG 115 >gi|305665378|ref|YP_003861665.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Maribacter sp. HTCC2170] gi|88710133|gb|EAR02365.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Maribacter sp. HTCC2170] Length = 373 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + C C + CV+VCPV + E + + I D C+ C C CP D + Sbjct: 223 FYMGTQCFHCDNPPCVDVCPVQATWREDDGLVVIDYDWCVGCRYCMAACPYDGRR 277 >gi|110643034|ref|YP_670764.1| putative electron transport protein YgfS [Escherichia coli 536] gi|191173216|ref|ZP_03034747.1| 4Fe-4S binding protein [Escherichia coli F11] gi|300995684|ref|ZP_07181212.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|331659014|ref|ZP_08359956.1| putative electron transport protein YgfS [Escherichia coli TA206] gi|110344626|gb|ABG70863.1| putative electron transport protein YgfS [Escherichia coli 536] gi|190906467|gb|EDV66075.1| 4Fe-4S binding protein [Escherichia coli F11] gi|300304792|gb|EFJ59312.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|315295672|gb|EFU54992.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] gi|324011766|gb|EGB80985.1| 4Fe-4S binding domain protein [Escherichia coli MS 60-1] gi|331053596|gb|EGI25625.1| putative electron transport protein YgfS [Escherichia coli TA206] Length = 162 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|308050140|ref|YP_003913706.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307632330|gb|ADN76632.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 211 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CVE+CP ++ + + + ++CI C +C CP DA + D Sbjct: 62 FAYYMSIGCNHCSKPPCVEICPTGAMHKRAKDGIVRVDTEQCIGCEMCAEMCPYDAPQYD 121 Query: 59 TEPG 62 G Sbjct: 122 KAKG 125 >gi|293415744|ref|ZP_06658387.1| hydrogenase-4 component A [Escherichia coli B185] gi|291433392|gb|EFF06371.1| hydrogenase-4 component A [Escherichia coli B185] Length = 205 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|212223876|ref|YP_002307112.1| putative ATPase RIL [Thermococcus onnurineus NA1] gi|212008833|gb|ACJ16215.1| Hypothetical ATPase [Thermococcus onnurineus NA1] Length = 591 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 66 >gi|167747724|ref|ZP_02419851.1| hypothetical protein ANACAC_02445 [Anaerostipes caccae DSM 14662] gi|167653086|gb|EDR97215.1| hypothetical protein ANACAC_02445 [Anaerostipes caccae DSM 14662] Length = 525 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 15/76 (19%) Query: 17 CVEVCPVDCFYEGENFL---AIHPD-ECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 C + CP C GEN A+ PD +CI CG+C C AI +N + Sbjct: 405 CQDACPKKCIKIGENITSLPAVDPDAQCIGCGMCVAACSGQAI-----------FLVNEQ 453 Query: 73 YATQWPNITTKKESLP 88 + + ++T E LP Sbjct: 454 FEKDYASVTLPYEFLP 469 >gi|159905431|ref|YP_001549093.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159886924|gb|ABX01861.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 481 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 VTENCILC +C+ CP D E F + E CI+CG+C +CP +A+ Sbjct: 225 VTENCILC--GNCITKCPKD-VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL 281 Query: 56 KPD 58 + D Sbjct: 282 RFD 284 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 V C+LC+ C++ CP D E F +I +ECI CG C CP DAI Sbjct: 317 VDGGCVLCEL--CIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAI 367 >gi|146284007|ref|YP_001174160.1| tetrathionate reductase subunit B [Pseudomonas stutzeri A1501] gi|145572212|gb|ABP81318.1| tetrathionate reductase subunit B [Pseudomonas stutzeri A1501] Length = 254 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 109 LCNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDA 156 >gi|113868895|ref|YP_727384.1| ferredoxin [Ralstonia eutropha H16] gi|113527671|emb|CAJ94016.1| Ferredoxin [Ralstonia eutropha H16] Length = 721 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T C +C CV CP + L+ C+ CG+CE CP DAI Sbjct: 585 VDTGKCTMC--MACVGACPSQALRDNPERPVLSFIERNCVQCGLCEKTCPEDAI 636 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 12/57 (21%) Query: 11 LCKH--------TDCVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H T C+++C + +++G+ + + P+ C+ CG C CP AI Sbjct: 332 LCAHGRNQTTGCTACIDICSTEAIGSRWHDGKGRIEVTPNLCMGCGACTTVCPSGAI 388 >gi|109899273|ref|YP_662528.1| electron transport complex protein RnfB [Pseudoalteromonas atlantica T6c] gi|109701554|gb|ABG41474.1| electron transport complex, RnfABCDGE type, B subunit [Pseudoalteromonas atlantica T6c] Length = 188 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 110 VAFIREDECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVDPCPVDCI 163 >gi|309701815|emb|CBJ01127.1| putative anaerobic dimethyl sulfoxide reductase, Fe-S subunit [Escherichia coli ETEC H10407] Length = 205 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|310828225|ref|YP_003960582.1| RnfB [Eubacterium limosum KIST612] gi|308739959|gb|ADO37619.1| RnfB [Eubacterium limosum KIST612] Length = 347 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK CV+VCP + N +I+ D+C C C +CP AI Sbjct: 216 GCIACKA--CVKVCPAEAITVENNLASINYDKCTQCQACFEKCPTGAI 261 >gi|326793210|ref|YP_004311031.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Clostridium lentocellum DSM 5427] gi|326543974|gb|ADZ85833.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Clostridium lentocellum DSM 5427] Length = 105 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C C VCP YE +N + I C CG+C+ EC I + E G+E Sbjct: 46 DKCIHCNW--CYMVCPEGVIYENDNKIQIDYRFCKGCGICQKECKKQCIIMEEEGGVE 101 >gi|163841886|ref|YP_001626291.1| ferredoxin--NADP reductase [Renibacterium salmoninarum ATCC 33209] gi|162955362|gb|ABY24877.1| ferredoxin--NADP reductase [Renibacterium salmoninarum ATCC 33209] Length = 472 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL----ELWLKINSEY 73 L I P CID G C CPVDAI P E L + + KIN++Y Sbjct: 2 LYIDPKSCIDFGACVDACPVDAIFP-IESLLAGPKKAYPKINADY 45 >gi|149911479|ref|ZP_01900095.1| putative nitrite reductase, Fe-S protein (NrfC) [Moritella sp. PE36] gi|149805443|gb|EDM65451.1| putative nitrite reductase, Fe-S protein (NrfC) [Moritella sp. PE36] Length = 228 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%) Query: 6 TENCILCKHTD---CVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECP--VDAIKPD 58 T N + C+H D CV VCP Y + +H D+C+ CG C CP V P+ Sbjct: 91 TFNRVSCQHCDNAPCVTVCPTGASYVDLKTGIVDVHSDKCVGCGYCLAACPYQVRFFNPE 150 Query: 59 TE 60 T+ Sbjct: 151 TK 152 >gi|15668380|ref|NP_247176.1| 4Fe-4S iron-sulfur protein [Methanocaldococcus jannaschii DSM 2661] gi|2494448|sp|Q57661|Y208_METJA RecName: Full=Uncharacterized protein MJ0208 gi|1498983|gb|AAB98191.1| 4Fe-4S iron-sulfur protein [Methanocaldococcus jannaschii DSM 2661] Length = 246 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 + VCP + +NF+ I +C+ CG C+ CP +AI E + + KI++E Sbjct: 166 INVCPNGAIVKRDNFVEILLSKCLGCGNCKKVCPYNAIIEGKEIKMRVR-KIDAE 219 >gi|157157756|ref|YP_001462877.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|157079786|gb|ABV19494.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] Length = 205 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|302337663|ref|YP_003802869.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301634848|gb|ADK80275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 234 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTE 60 E C C C CPV EN A ++ D CI CG CE CP D E Sbjct: 131 ETCKQCAEPYCANACPVQAISTDENTGARVVNTDICIGCGSCERACPFGMATVDPE 186 >gi|255067816|ref|ZP_05319671.1| ferredoxin [Neisseria sicca ATCC 29256] gi|255047907|gb|EET43371.1| ferredoxin [Neisseria sicca ATCC 29256] Length = 130 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/23 (69%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP DAI E Sbjct: 54 DECINCDVCEPECPNDAISQGEE 76 >gi|224370949|ref|YP_002605113.1| ferredoxin (4Fe-4S iron-sulfur cluster binding protein) [Desulfobacterium autotrophicum HRM2] gi|223693666|gb|ACN16949.1| ferredoxin (4Fe-4S iron-sulfur cluster binding protein) [Desulfobacterium autotrophicum HRM2] Length = 361 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C C+ C++ C ++ G+ + H CI CG+C CPVDAI+ + +P Sbjct: 276 EECTACE--TCLDRCQMNAIEIGDAAVVDHA-RCIGCGLCVTTCPVDAIRLEEKP 327 >gi|150399682|ref|YP_001323449.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012385|gb|ABR54837.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 482 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 12/61 (19%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--------LAIHP-DECIDCGVCEPECPVDAI 55 V ENC+LC +C+ CP D + ENF +AI P CI+CG+C +CP A+ Sbjct: 226 VNENCVLC--GNCILKCPKD-VLKIENFKISKTKEEMAIKPVKHCINCGLCVDKCPTGAL 282 Query: 56 K 56 + Sbjct: 283 R 283 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 11/61 (18%) Query: 7 ENCILCKHTD---CVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ENC C +TD C+E CP +G+ F CI CG CE ECP AIK + Sbjct: 13 ENCEKCPNTDISKCMEACPTGAIKLLDGKAF------SCITCGTCEKECPTGAIKKNEYG 66 Query: 62 G 62 G Sbjct: 67 G 67 >gi|18977217|ref|NP_578574.1| 2-keto acid:ferredoxin oxidoreductase subunit alpha [Pyrococcus furiosus DSM 3638] gi|18892876|gb|AAL80969.1| 2-keto acid:ferredoxin oxidoreductase subunit alpha [Pyrococcus furiosus DSM 3638] Length = 627 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VV + C CK + CP + + + I P C CGVC CP DAIK +E Sbjct: 570 VVEDRCTGCKACILLTGCPALVYEPEKKKVRIDPLICTGCGVCNQLCPFDAIKFPSE 626 >gi|24372600|ref|NP_716642.1| NADH dehydrogenase subunit I [Shewanella oneidensis MR-1] gi|81744862|sp|Q8EI36|NUOI_SHEON RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|24346625|gb|AAN54087.1|AE015546_4 NADH dehydrogenase I, I subunit [Shewanella oneidensis MR-1] Length = 180 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C ++ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSERDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|21226158|ref|NP_632080.1| heterodisulfate reductase subunit A [Methanosarcina mazei Go1] gi|41017211|sp|Q8Q0T0|HDRA_METMA RecName: Full=CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit A gi|20904385|gb|AAM29752.1| Heterodisulfate reductase, subunit A [Methanosarcina mazei Go1] Length = 793 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-----FYEGEN-------------FLAIHPDECIDCG 44 +V+ + C C C EVCPV+ + G++ + I PD C+ CG Sbjct: 237 FVLEDKCKGCVDL-CSEVCPVEIENPMNYGIGKSRAIYMPIPQSVPQVVLIDPDHCVGCG 295 Query: 45 VCEPECPVDAIKPDTEP 61 +C+ CP +A+ + +P Sbjct: 296 LCQLACPAEAVDYEQKP 312 >gi|320177371|gb|EFW52372.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella dysenteriae CDC 74-1112] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|320353705|ref|YP_004195044.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Desulfobulbus propionicus DSM 2032] gi|320122207|gb|ADW17753.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Desulfobulbus propionicus DSM 2032] Length = 683 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 16/66 (24%) Query: 9 CILCKHTDCVEVC-------PVDCFYEGENFLAIHP-------DECIDCGVCEPECPVDA 54 C+LC DCV C +D + G + + + EC++CG C CP A Sbjct: 150 CVLCG--DCVRFCDEIQSIGAIDFAFRGHDAMVLPAFGHDLGTTECVNCGQCASVCPTGA 207 Query: 55 IKPDTE 60 + P +E Sbjct: 208 LAPASE 213 >gi|255318323|ref|ZP_05359558.1| 4Fe-4S binding domain protein [Acinetobacter radioresistens SK82] gi|262379067|ref|ZP_06072223.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter radioresistens SH164] gi|255304635|gb|EET83817.1| 4Fe-4S binding domain protein [Acinetobacter radioresistens SK82] gi|262298524|gb|EEY86437.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter radioresistens SH164] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|254773429|ref|ZP_05214945.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 330 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 16/97 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 131 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE------ 184 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + + YAT ++ PS + GV QK Sbjct: 185 ----RRNDGTYATP-----AQRPDRPSEEIVTGVAQK 212 >gi|296123732|ref|YP_003631510.1| hypothetical protein Plim_3498 [Planctomyces limnophilus DSM 3776] gi|296016072|gb|ADG69311.1| protein of unknown function DUF224 cysteine-rich region domain protein [Planctomyces limnophilus DSM 3776] Length = 463 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 22/76 (28%) Query: 31 NFLAIHPDECIDCGVCEPECP---------------VDAIKPDTEPGLELWLKINSEYAT 75 N +A H + C+DC CE CP ++A + D +PGL + A+ Sbjct: 81 NEIASHLEACLDCRACETACPSGVQYGRLIEPFRVAMEATRTDEQPGL-------ASQAS 133 Query: 76 QWPNITTKKESLPSAA 91 QW T + PSA Sbjct: 134 QWLTSTLLTKLFPSAG 149 >gi|183599629|ref|ZP_02961122.1| hypothetical protein PROSTU_03116 [Providencia stuartii ATCC 25827] gi|188021881|gb|EDU59921.1| hypothetical protein PROSTU_03116 [Providencia stuartii ATCC 25827] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|171464203|ref|YP_001798316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193741|gb|ACB44702.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 88 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 4/29 (13%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELW 66 DECI+C VCEPECP DAI GLE++ Sbjct: 7 DECINCDVCEPECPNDAIY----MGLEIY 31 >gi|167771401|ref|ZP_02443454.1| hypothetical protein ANACOL_02767 [Anaerotruncus colihominis DSM 17241] gi|167666041|gb|EDS10171.1| hypothetical protein ANACOL_02767 [Anaerotruncus colihominis DSM 17241] Length = 403 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV C+ C C C D +I +C+ CG C CPVDA++ + Sbjct: 226 YVEQSVCVGCGM--CKRNCAHDAIAITNRKASIDHSKCVGCGRCIGACPVDAVQAAQDEA 283 Query: 63 LELWLKINSEY 73 ++ K SEY Sbjct: 284 FDILNKKISEY 294 >gi|160934322|ref|ZP_02081709.1| hypothetical protein CLOLEP_03193 [Clostridium leptum DSM 753] gi|156866995|gb|EDO60367.1| hypothetical protein CLOLEP_03193 [Clostridium leptum DSM 753] Length = 368 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV+ E C+ C+ C + C D + I+ C CG C C DAIKP + Sbjct: 191 YVIQEQCVGCR--VCAKSCAHDAISFTDKKANINHSLCAGCGRCIGVCHRDAIKPADDES 248 Query: 63 LELWLKINSEY 73 ++ + +EY Sbjct: 249 FDILNQKVAEY 259 >gi|74312090|ref|YP_310509.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|73855567|gb|AAZ88274.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|323164414|gb|EFZ50217.1| dimethylsulfoxide reductase, chain B [Shigella sonnei 53G] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|41033733|emb|CAF18533.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Thermoproteus tenax] Length = 650 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 6/37 (16%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG-----LELW 66 I P C C +C CP +AIKP EPG LELW Sbjct: 612 IDPSLCNGCSMCAQVCPYNAIKPQ-EPGKVNRWLELW 647 >gi|194437650|ref|ZP_03069746.1| hydrogenase-4 component A [Escherichia coli 101-1] gi|253772627|ref|YP_003035458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162456|ref|YP_003045564.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli B str. REL606] gi|297517623|ref|ZP_06936009.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli OP50] gi|194423456|gb|EDX39447.1| hydrogenase-4 component A [Escherichia coli 101-1] gi|242378081|emb|CAQ32852.1| hydrogenase 4, component A, subunit of hydrogenase 4 [Escherichia coli BL21(DE3)] gi|253323671|gb|ACT28273.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974357|gb|ACT40028.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli B str. REL606] gi|253978524|gb|ACT44194.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BL21(DE3)] gi|323961274|gb|EGB56886.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323970998|gb|EGB66247.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|15802003|ref|NP_288024.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|15831549|ref|NP_310322.1| oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|16129547|ref|NP_416106.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|26247834|ref|NP_753874.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli CFT073] gi|82776844|ref|YP_403193.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|89108430|ref|AP_002210.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. W3110] gi|91210799|ref|YP_540785.1| Fe-S subunit oxidoreductase [Escherichia coli UTI89] gi|117623775|ref|YP_852688.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli APEC O1] gi|157161048|ref|YP_001458366.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|168750603|ref|ZP_02775625.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|168757500|ref|ZP_02782507.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|168763713|ref|ZP_02788720.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|168771685|ref|ZP_02796692.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|168775813|ref|ZP_02800820.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|168783406|ref|ZP_02808413.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|168789420|ref|ZP_02814427.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|168800843|ref|ZP_02825850.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|170020058|ref|YP_001725012.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|170081253|ref|YP_001730573.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|191165925|ref|ZP_03027762.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|193064916|ref|ZP_03045992.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|193066892|ref|ZP_03047861.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194426027|ref|ZP_03058583.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194436394|ref|ZP_03068495.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|195938978|ref|ZP_03084360.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EC4024] gi|208810651|ref|ZP_03252527.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208817045|ref|ZP_03258165.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208821725|ref|ZP_03262045.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209399816|ref|YP_002270660.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209918901|ref|YP_002292985.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE11] gi|215486764|ref|YP_002329195.1| oxidoreductase, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|217328606|ref|ZP_03444687.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218554156|ref|YP_002387069.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI1] gi|218558459|ref|YP_002391372.1| oxidoreductase, Fe-S subunit [Escherichia coli S88] gi|218689509|ref|YP_002397721.1| oxidoreductase, Fe-S subunit [Escherichia coli ED1a] gi|218695151|ref|YP_002402818.1| oxidoreductase, Fe-S subunit [Escherichia coli 55989] gi|218699845|ref|YP_002407474.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI39] gi|218705088|ref|YP_002412607.1| oxidoreductase, Fe-S subunit [Escherichia coli UMN026] gi|227886054|ref|ZP_04003859.1| oxidoreductase, Fe-S subunit [Escherichia coli 83972] gi|237705528|ref|ZP_04536009.1| dimethylsulfoxide reductase subunit [Escherichia sp. 3_2_53FAA] gi|238900804|ref|YP_002926600.1| oxidoreductase, Fe-S subunit [Escherichia coli BW2952] gi|253773455|ref|YP_003036286.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161650|ref|YP_003044758.1| oxidoreductase, Fe-S subunit [Escherichia coli B str. REL606] gi|254793206|ref|YP_003078043.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|256018219|ref|ZP_05432084.1| oxidoreductase, Fe-S subunit [Shigella sp. D9] gi|256022751|ref|ZP_05436616.1| oxidoreductase, Fe-S subunit [Escherichia sp. 4_1_40B] gi|260843893|ref|YP_003221671.1| oxidoreductase, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|260855390|ref|YP_003229281.1| oxidoreductase, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|260868080|ref|YP_003234482.1| oxidoreductase, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|261227967|ref|ZP_05942248.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261258299|ref|ZP_05950832.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291282721|ref|YP_003499539.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. CB9615] gi|293405090|ref|ZP_06649082.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1412] gi|293409899|ref|ZP_06653475.1| conserved hypothetical protein [Escherichia coli B354] gi|293414905|ref|ZP_06657548.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli B185] gi|293445963|ref|ZP_06662385.1| dimethyl sulfoxide reductase subunit YnfG [Escherichia coli B088] gi|298380736|ref|ZP_06990335.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1302] gi|301029227|ref|ZP_07192340.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|306813449|ref|ZP_07447639.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli NC101] gi|307138239|ref|ZP_07497595.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli H736] gi|307310841|ref|ZP_07590487.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|309788770|ref|ZP_07683366.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] gi|312966654|ref|ZP_07780874.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|312969603|ref|ZP_07783786.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|331642172|ref|ZP_08343307.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331647075|ref|ZP_08348169.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] gi|331652977|ref|ZP_08353982.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|331663058|ref|ZP_08363968.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331668261|ref|ZP_08369109.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331677447|ref|ZP_08378122.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331683095|ref|ZP_08383696.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332279270|ref|ZP_08391683.1| oxidoreductase [Shigella sp. D9] gi|77416847|sp|P0AAJ2|YNFG_ECOL6 RecName: Full=Probable anaerobic dimethyl sulfoxide reductase chain ynfG; AltName: Full=DMSO reductase iron-sulfur subunit ynfG gi|77416848|sp|P0AAJ1|YNFG_ECOLI RecName: Full=Probable anaerobic dimethyl sulfoxide reductase chain ynfG; AltName: Full=DMSO reductase iron-sulfur subunit ynfG gi|12515564|gb|AAG56576.1|AE005382_10 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|26108237|gb|AAN80439.1|AE016761_14 Probable anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli CFT073] gi|1742612|dbj|BAA15313.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K12 substr. W3110] gi|1787872|gb|AAC74661.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|13361761|dbj|BAB35718.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|81240992|gb|ABB61702.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|91072373|gb|ABE07254.1| Fe-S subunit oxidoreductase [Escherichia coli UTI89] gi|115512899|gb|ABJ00974.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli APEC O1] gi|157066728|gb|ABV05983.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|169754986|gb|ACA77685.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|169889088|gb|ACB02795.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|187768665|gb|EDU32509.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|188015250|gb|EDU53372.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|188999242|gb|EDU68228.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|189355556|gb|EDU73975.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|189359615|gb|EDU78034.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|189366172|gb|EDU84588.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|189370961|gb|EDU89377.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|189376913|gb|EDU95329.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|190904056|gb|EDV63768.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|192927403|gb|EDV82021.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|192959482|gb|EDV89916.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194416082|gb|EDX32348.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194424426|gb|EDX40412.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|208725167|gb|EDZ74874.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208731388|gb|EDZ80077.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208741848|gb|EDZ89530.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209161216|gb|ACI38649.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209770048|gb|ACI83336.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770050|gb|ACI83337.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770052|gb|ACI83338.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770054|gb|ACI83339.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770056|gb|ACI83340.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209912160|dbj|BAG77234.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE11] gi|215264836|emb|CAS09221.1| oxidoreductase, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|217317953|gb|EEC26380.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218351883|emb|CAU97608.1| oxidoreductase, Fe-S subunit [Escherichia coli 55989] gi|218360924|emb|CAQ98496.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI1] gi|218365228|emb|CAR02949.1| oxidoreductase, Fe-S subunit [Escherichia coli S88] gi|218369831|emb|CAR17602.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI39] gi|218427073|emb|CAR07952.2| oxidoreductase, Fe-S subunit [Escherichia coli ED1a] gi|218432185|emb|CAR13073.1| oxidoreductase, Fe-S subunit [Escherichia coli UMN026] gi|222033347|emb|CAP76088.1| anaerobic dimethyl sulfoxide reductase chain [Escherichia coli LF82] gi|226900285|gb|EEH86544.1| dimethylsulfoxide reductase subunit [Escherichia sp. 3_2_53FAA] gi|227836983|gb|EEJ47449.1| oxidoreductase, Fe-S subunit [Escherichia coli 83972] gi|238861969|gb|ACR63967.1| oxidoreductase, Fe-S subunit [Escherichia coli BW2952] gi|242377320|emb|CAQ32065.1| oxidoreductase, predicted Fe-S subunit, subunit of putative selenate reductase [Escherichia coli BL21(DE3)] gi|253324499|gb|ACT29101.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973551|gb|ACT39222.1| oxidoreductase, Fe-S subunit [Escherichia coli B str. REL606] gi|253977746|gb|ACT43416.1| oxidoreductase, Fe-S subunit [Escherichia coli BL21(DE3)] gi|254592606|gb|ACT71967.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|257754039|dbj|BAI25541.1| oxidoreductase, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|257759040|dbj|BAI30537.1| oxidoreductase, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|257764436|dbj|BAI35931.1| oxidoreductase, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|260449289|gb|ACX39711.1| dimethylsulfoxide reductase, chain B [Escherichia coli DH1] gi|281178659|dbj|BAI54989.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE15] gi|290762594|gb|ADD56555.1| Probable anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. CB9615] gi|291322793|gb|EFE62221.1| dimethyl sulfoxide reductase subunit YnfG [Escherichia coli B088] gi|291427298|gb|EFF00325.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1412] gi|291432553|gb|EFF05532.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli B185] gi|291470367|gb|EFF12851.1| conserved hypothetical protein [Escherichia coli B354] gi|294491574|gb|ADE90330.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli IHE3034] gi|298278178|gb|EFI19692.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1302] gi|299877863|gb|EFI86074.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|305853194|gb|EFM53634.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli NC101] gi|306909019|gb|EFN39515.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|307553559|gb|ADN46334.1| dimethylsulfoxide reductase, B subunit [Escherichia coli ABU 83972] gi|307626925|gb|ADN71229.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli UM146] gi|308923404|gb|EFP68915.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] gi|310337888|gb|EFQ02977.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|312288764|gb|EFR16664.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|312946189|gb|ADR27016.1| oxidoreductase, Fe-S subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315060895|gb|ADT75222.1| oxidoreductase, Fe-S subunit [Escherichia coli W] gi|315136229|dbj|BAJ43388.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli DH1] gi|315619043|gb|EFU99625.1| dimethylsulfoxide reductase, chain B [Escherichia coli 3431] gi|320188273|gb|EFW62935.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320197771|gb|EFW72379.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli EC4100B] gi|320641943|gb|EFX11307.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H7 str. G5101] gi|320647259|gb|EFX16067.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H- str. 493-89] gi|320652552|gb|EFX20821.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H- str. H 2687] gi|320653073|gb|EFX21267.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658761|gb|EFX26435.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. USDA 5905] gi|320668612|gb|EFX35417.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H7 str. LSU-61] gi|323152910|gb|EFZ39180.1| dimethylsulfoxide reductase, chain B [Escherichia coli EPECa14] gi|323163340|gb|EFZ49167.1| dimethylsulfoxide reductase, chain B [Escherichia coli E128010] gi|323169880|gb|EFZ55536.1| dimethylsulfoxide reductase, chain B [Escherichia coli LT-68] gi|323180903|gb|EFZ66441.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1180] gi|323185873|gb|EFZ71230.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1357] gi|323187212|gb|EFZ72526.1| dimethylsulfoxide reductase, chain B [Escherichia coli RN587/1] gi|323378536|gb|ADX50804.1| dimethylsulfoxide reductase, chain B [Escherichia coli KO11] gi|323937383|gb|EGB33661.1| dimethylsulfoxide reductase [Escherichia coli E1520] gi|323940336|gb|EGB36528.1| dimethylsulfoxide reductase [Escherichia coli E482] gi|323947977|gb|EGB43971.1| dimethylsulfoxide reductase [Escherichia coli H120] gi|323952573|gb|EGB48445.1| dimethylsulfoxide reductase [Escherichia coli H252] gi|323956753|gb|EGB52488.1| dimethylsulfoxide reductase [Escherichia coli H263] gi|323962219|gb|EGB57811.1| dimethylsulfoxide reductase [Escherichia coli H489] gi|323973778|gb|EGB68952.1| dimethylsulfoxide reductase [Escherichia coli TA007] gi|324119343|gb|EGC13230.1| dimethylsulfoxide reductase [Escherichia coli E1167] gi|326341954|gb|EGD65735.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] gi|326343504|gb|EGD67266.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|330911395|gb|EGH39905.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli AA86] gi|331038970|gb|EGI11190.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331043858|gb|EGI15994.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] gi|331049075|gb|EGI21147.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|331058857|gb|EGI30834.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331063455|gb|EGI35366.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331073907|gb|EGI45227.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331079310|gb|EGI50507.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332091391|gb|EGI96477.1| dimethylsulfoxide reductase, chain B [Shigella boydii 5216-82] gi|332101622|gb|EGJ04968.1| oxidoreductase [Shigella sp. D9] gi|332343306|gb|AEE56640.1| dimethylsulfoxide reductase, chain B DmsB [Escherichia coli UMNK88] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|323936373|gb|EGB32663.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|315425433|dbj|BAJ47097.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Candidatus Caldiarchaeum subterraneum] Length = 223 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 V + C C+ CVEVCPV+ ++ N + D CI CG C CP A Sbjct: 91 VPKMCNHCEEPSCVEVCPVNATFKAPNGEVLVDDNVCIGCGACIQNCPYGA 141 >gi|317048932|ref|YP_004116580.1| NADH-quinone oxidoreductase subunit I [Pantoea sp. At-9b] gi|316950549|gb|ADU70024.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. At-9b] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|239995948|ref|ZP_04716472.1| electron transport complex protein RnfB [Alteromonas macleodii ATCC 27126] Length = 193 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 110 VAFIREDECIGC--TKCIQACPVDAILGAAKHMHTVITDECTGCDLCVDPCPVDCI 163 >gi|238898693|ref|YP_002924374.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466452|gb|ACQ68226.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|215488185|ref|YP_002330616.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O127:H6 str. E2348/69] gi|312964856|ref|ZP_07779096.1| hydrogenase-4 component A [Escherichia coli 2362-75] gi|215266257|emb|CAS10686.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O127:H6 str. E2348/69] gi|312290412|gb|EFR18292.1| hydrogenase-4 component A [Escherichia coli 2362-75] Length = 162 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|212709896|ref|ZP_03318024.1| hypothetical protein PROVALCAL_00945 [Providencia alcalifaciens DSM 30120] gi|212687707|gb|EEB47235.1| hypothetical protein PROVALCAL_00945 [Providencia alcalifaciens DSM 30120] Length = 252 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + I + C+ C C CP DA Sbjct: 106 LCNHCDNPPCVPVCPVQATFQREDGIVVIDNERCVGCAYCVQACPYDA 153 >gi|206576263|ref|YP_002237331.1| NADH-quinone oxidoreductase, I subunit [Klebsiella pneumoniae 342] gi|288934261|ref|YP_003438320.1| NADH-quinone oxidoreductase, chain I [Klebsiella variicola At-22] gi|290508464|ref|ZP_06547835.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. 1_1_55] gi|206565321|gb|ACI07097.1| NADH-quinone oxidoreductase, I subunit [Klebsiella pneumoniae 342] gi|288888990|gb|ADC57308.1| NADH-quinone oxidoreductase, chain I [Klebsiella variicola At-22] gi|289777858|gb|EFD85855.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. 1_1_55] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFELG 123 >gi|188533354|ref|YP_001907151.1| NADH dehydrogenase subunit I [Erwinia tasmaniensis Et1/99] gi|259907934|ref|YP_002648290.1| NADH dehydrogenase subunit I [Erwinia pyrifoliae Ep1/96] gi|292488836|ref|YP_003531723.1| NADH dehydrogenase I subunit I [Erwinia amylovora CFBP1430] gi|292899987|ref|YP_003539356.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC 49946] gi|226737392|sp|B2VIN2|NUOI_ERWT9 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|188028396|emb|CAO96257.1| NADH dehydrogenase I subunit I [Erwinia tasmaniensis Et1/99] gi|224963556|emb|CAX55046.1| NADH dehydrogenase I subunit I [Erwinia pyrifoliae Ep1/96] gi|283477815|emb|CAY73731.1| NADH dehydrogenase I chain I [Erwinia pyrifoliae DSM 12163] gi|291199835|emb|CBJ46959.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC 49946] gi|291554270|emb|CBA21585.1| NADH dehydrogenase I chain I [Erwinia amylovora CFBP1430] gi|310768158|gb|ADP13108.1| NADH dehydrogenase subunit I [Erwinia sp. Ejp617] gi|312172996|emb|CBX81251.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC BAA-2158] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETADGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|148642370|ref|YP_001272883.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] gi|148551387|gb|ABQ86515.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] Length = 453 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 18/28 (64%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 GE + I+PD C+ CG C CP DAIK Sbjct: 118 GEAYSVINPDTCVRCGYCFRVCPTDAIK 145 >gi|83590718|ref|YP_430727.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573632|gb|ABC20184.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 176 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 24/52 (46%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C+ C CPV + N + I+ D CI C C CP +I+ Sbjct: 56 LSVRCRHCEDAPCARACPVGAITQKNNVVLINSDRCIGCKTCAIVCPFGSIE 107 >gi|121998731|ref|YP_001003518.1| sulfite reductase, dissimilatory-type subunit beta [Halorhodospira halophila SL1] gi|121590136|gb|ABM62716.1| dissimilatory sulfite reductase beta subunit [Halorhodospira halophila SL1] Length = 362 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Query: 11 LCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ V CPV +G+ L + +C+ CG C P CP I L +W Sbjct: 207 VCERPSVVARCPVAAIRPAVVDGKPSLEVDESKCVACGACYPPCPPMQINDPEHSRLAIW 266 Query: 67 LKINSEYATQWP 78 + N A P Sbjct: 267 VGGNHSNARGVP 278 >gi|325290458|ref|YP_004266639.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324965859|gb|ADY56638.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 97 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 ++ E C+ C+ C EVCP F + + D C++CG C CPV+AI + G Sbjct: 14 LLVEKCVGCER--CTEVCPHGVFGIADKRAKLKDRDSCMECGACAMNCPVNAISVEASVG 71 >gi|324118175|gb|EGC12072.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|300930083|ref|ZP_07145509.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|300462010|gb|EFK25503.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] Length = 218 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|293395177|ref|ZP_06639463.1| NADH dehydrogenase I subunit I [Serratia odorifera DSM 4582] gi|291422354|gb|EFE95597.1| NADH dehydrogenase I subunit I [Serratia odorifera DSM 4582] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|237809387|ref|YP_002893827.1| NADH dehydrogenase subunit I [Tolumonas auensis DSM 9187] gi|259514790|sp|C4LB38|NUOI_TOLAT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|237501648|gb|ACQ94241.1| NADH-quinone oxidoreductase, chain I [Tolumonas auensis DSM 9187] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAERVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|170719880|ref|YP_001747568.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida W619] gi|169757883|gb|ACA71199.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida W619] Length = 936 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQAK 572 >gi|104780001|ref|YP_606499.1| D-lactate deshydrogenase [Pseudomonas entomophila L48] gi|95108988|emb|CAK13684.1| putative D-lactate deshydrogenase [Pseudomonas entomophila L48] Length = 936 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQAK 572 >gi|78044780|ref|YP_361471.1| putative sulfite reductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996895|gb|ABB15794.1| putative sulfite reductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 302 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + ENC C C ++CPV+ + +++ + CI CG C CP +A + + Sbjct: 173 IKENCTACGL--CTKICPVNAITLNQQEISVDYEVCIGCGDCVKACPFEAYRGE 224 >gi|30063104|ref|NP_837275.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|30041353|gb|AAP17082.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|281601024|gb|ADA74008.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Shigella flexneri 2002017] gi|313649044|gb|EFS13480.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2a str. 2457T] gi|332757173|gb|EGJ87511.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 4343-70] gi|332758411|gb|EGJ88732.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-671] gi|332766983|gb|EGJ97182.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2930-71] gi|333003851|gb|EGK23386.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-218] gi|333005235|gb|EGK24755.1| dimethylsulfoxide reductase, chain B [Shigella flexneri VA-6] gi|333017930|gb|EGK37235.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-304] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|312967579|ref|ZP_07781794.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 2362-75] gi|312287776|gb|EFR15681.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 2362-75] Length = 180 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|296132292|ref|YP_003639539.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296030870|gb|ADG81638.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 261 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C+ VC +N + I D CI C C CP AI D E G Sbjct: 72 QCMHCTEASCMAVCAAGAISRADNGQVVIDRDTCIGCKNCVVACPFGAIGFDEETG 127 >gi|170768738|ref|ZP_02903191.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|170122286|gb|EDS91217.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] Length = 205 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|91204283|emb|CAJ71936.1| hypothetical protein kustc1191 [Candidatus Kuenenia stuttgartiensis] Length = 308 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CVE C D + + I ++C++CG+C CPV IK Sbjct: 194 CIEC--MKCVEACREDAITVKDAQVTIDKEKCVECGICAKVCPVGTIK 239 >gi|26991420|ref|NP_746845.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida KT2440] gi|24986491|gb|AAN70309.1|AE016671_10 D-lactate dehydrogenase, putative [Pseudomonas putida KT2440] Length = 936 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKK 84 D+CI+CG CEP CP + + +W I A Q I T++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQ---AKQRAGIDTRE 581 >gi|41017304|sp|Q49180|MVHB_METFE RecName: Full=Polyferredoxin protein mvhB gi|149806|gb|AAA72833.1| polyferredoxin (mvhB) [Methanothermus fervidus] Length = 412 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 17/109 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI---------K 56 E CI C CVE+CP F E ++ L + P+ C CG+CE CP DAI K Sbjct: 214 EECIGC--NTCVEICPGG-FIEPKSDLTVSLPEICPACGLCEKLCPTDAIELEVKLGPAK 270 Query: 57 PDTEPGL---ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 P TE G+ + K A PN + S P G+K+ EK Sbjct: 271 PVTEEGIVYNDENCKFCGRCALNCPNEAIRVVS-PKGRVFPGLKKVDEK 318 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAI 55 C+LC+ CV VCP++ EG A I+ +C+ CG+C PECPV+AI Sbjct: 107 CVLCQQ--CVNVCPIEVIGIEGVKEPARVEIKIDKPIYIVDCVGCGLCVPECPVNAI 161 >gi|148549805|ref|YP_001269907.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida F1] gi|148513863|gb|ABQ80723.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida F1] Length = 936 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKK 84 D+CI+CG CEP CP + + +W I A Q I T++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQ---AKQRAGIDTRE 581 >gi|312136954|ref|YP_004004291.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] gi|311224673|gb|ADP77529.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] Length = 412 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 17/109 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI---------K 56 E CI C CVE+CP F E ++ L + P+ C CG+CE CP DAI K Sbjct: 214 EECIGC--NTCVEICPGG-FIEPKSDLTVSLPEICPACGLCEKLCPTDAIELEVKLGPAK 270 Query: 57 PDTEPGL---ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 P TE G+ + K A PN + S P G+K+ EK Sbjct: 271 PVTEEGIVYNDENCKFCGRCALNCPNEAIRVVS-PKGRVFPGLKKVDEK 318 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAI 55 C+LC+ CV VCP++ EG A I+ +C+ CG+C PECPV+AI Sbjct: 107 CVLCQQ--CVNVCPIEVIGIEGVKEPARVEIKIDKPIYIVDCVGCGLCVPECPVNAI 161 >gi|331664038|ref|ZP_08364948.1| hydrogenase-4 component A [Escherichia coli TA143] gi|331059837|gb|EGI31814.1| hydrogenase-4 component A [Escherichia coli TA143] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|302336783|ref|YP_003801989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301633968|gb|ADK79395.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 98 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TE CI C C +VC VD +G+ L + P EC CG C ECP AI+ Sbjct: 22 TERCIACNR--CADVCQVDVLVPSLEKGKPPLVLFPGECWYCGCCVMECPTHAIQ 74 >gi|284922834|emb|CBG35923.1| putative oxidoreductase, 4Fe-4S subunit [Escherichia coli 042] Length = 162 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 7/107 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQI 114 Query: 69 INSEYATQWPNITTKKESLPSAA-------KMDGVKQKYEKYFSPNP 108 + + Q ES P+ A ++ V+Q+ NP Sbjct: 115 VKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENP 161 >gi|284922428|emb|CBG35515.1| hydrogenase-4 component A [Escherichia coli 042] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|256371808|ref|YP_003109632.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008392|gb|ACU53959.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 512 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 C C + CV CP Y+ + + + CI C C CP DAI Sbjct: 67 CNQCTNPPCVAACPTGAMYQRPDGIVDFNKAICIGCKACMAACPYDAI 114 >gi|209525025|ref|ZP_03273569.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] gi|209494434|gb|EDZ94745.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] Length = 1192 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Query: 24 DCFYEGENF-LAIHPDECIDCGVCEPECPV--------DAIKPDTEPGLELWLKINSEYA 74 D +EG+ F + + P++C CGVC CP AI +++P + + N E+ Sbjct: 729 DKAFEGQKFTIQVSPEDCTGCGVCVDVCPAKNKSMPSKKAINMESQPPIRATERENWEFF 788 Query: 75 TQWPN 79 PN Sbjct: 789 LNLPN 793 >gi|20092251|ref|NP_618326.1| sulfite reductase, beta subunit [Methanosarcina acetivorans C2A] gi|19917487|gb|AAM06806.1| sulfite reductase, beta subunit [Methanosarcina acetivorans C2A] Length = 288 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ ENC+ CK C + C V ++ + I ++CI CG C C DA++ + + G Sbjct: 166 ILEENCVGCKL--CEKACKVGAITVLDDKIRIDLEKCILCGACIAACRKDALRAE-KTGC 222 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 +++ N + P TK L + ++ + +K +Y+ Sbjct: 223 TIFVGGN---GGRHPRQGTKLLELAAEEQLFSILEKTFEYYR 261 >gi|89893277|ref|YP_516764.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89332725|dbj|BAE82320.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 182 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 + Y ++ +C C++ +CV VCP + + ++ + +H P C CG C CP K Sbjct: 54 LHYFLSLSCNHCENPECVRVCPEGTYRKRKDGIVLHDPWRCSGCGKCTHACPFHVPKYSL 113 Query: 60 EPG 62 G Sbjct: 114 SSG 116 >gi|320100963|ref|YP_004176555.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753315|gb|ADV65073.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 637 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ + C C + CP G I + C CG+C CP AI +P Sbjct: 572 VIEDKCTGCNACINLTACPAIVIPTGSRKPVILEELCAGCGLCASICPFKAISVKNQPST 631 Query: 64 ELWLKI 69 E W K+ Sbjct: 632 E-WEKL 636 >gi|313887911|ref|ZP_07821590.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846077|gb|EFR33459.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 305 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C + CP D + N +I D+CI+CG+C +CP AI Sbjct: 223 CEKNCPKDAIHVENNLASIDYDKCINCGICVSKCPTGAI 261 >gi|264678371|ref|YP_003278278.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|262208884|gb|ACY32982.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] Length = 241 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 95 LCNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDA 142 >gi|242277849|ref|YP_002989978.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120743|gb|ACS78439.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 251 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDA 54 T+ C+ C + CV+ CP ++ + + D CI CG C P CP DA Sbjct: 55 THFQPGGCMHCDNPTCVQACPTGATFKDKTDGTVRIDTSLCIGCGNCMPACPYDA 109 >gi|218700939|ref|YP_002408568.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI39] gi|218370925|emb|CAR18744.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI39] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|183598540|ref|ZP_02960033.1| hypothetical protein PROSTU_01934 [Providencia stuartii ATCC 25827] gi|188020717|gb|EDU58757.1| hypothetical protein PROSTU_01934 [Providencia stuartii ATCC 25827] Length = 245 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + I + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVIDNERCVGCAYCVQACPYDA 146 >gi|183233764|ref|XP_651284.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169801421|gb|EAL45897.2| hypothetical protein EHI_099860 [Entamoeba histolytica HM-1:IMSS] Length = 87 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP--DECIDCGVCEPECPVDAIK 56 +VT +CI C + C++ CP E N + P DEC+ C +CE CP++AIK Sbjct: 33 IIVTNDCIGC--SACMDNCPAG-VLEIVNGICTAPRIDECLQCHLCEDNCPINAIK 85 >gi|160935009|ref|ZP_02082395.1| hypothetical protein CLOLEP_03885 [Clostridium leptum DSM 753] gi|156866462|gb|EDO59834.1| hypothetical protein CLOLEP_03885 [Clostridium leptum DSM 753] Length = 431 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C T+C++ CP + E I + CIDCG C CP A K Sbjct: 6 DKCLGC--TNCIKRCPTEAIRVREGKAQIISERCIDCGECIRVCPHHAKK 53 >gi|254230289|ref|ZP_04923678.1| 4Fe-4S binding domain protein [Vibrio sp. Ex25] gi|151937186|gb|EDN56055.1| 4Fe-4S binding domain protein [Vibrio sp. Ex25] Length = 249 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 162 >gi|150399742|ref|YP_001323509.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012445|gb|ABR54897.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 395 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 18/112 (16%) Query: 8 NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CV++CPV+ + I P+E C+ CGVC PECPVDAI Sbjct: 90 HCVLCEK--CVDICPVEIISLPGKIDKPKKDVIIPNEPIAVTKDCVACGVCVPECPVDAI 147 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + ++ I +Q T ++ A K +QK K F+ N Sbjct: 148 SIEDTAVIDTNKCIYCTICSQ----TCPWNAIFVAGKKPQKRQKNIKSFTVN 195 >gi|300951821|ref|ZP_07165633.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301644471|ref|ZP_07244468.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|331643098|ref|ZP_08344233.1| hydrogenase-4 component A [Escherichia coli H736] gi|300448952|gb|EFK12572.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301077216|gb|EFK92022.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|331039896|gb|EGI12116.1| hydrogenase-4 component A [Escherichia coli H736] Length = 218 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|91772347|ref|YP_565039.1| formylmethanofuran dehydrogenase, subunit F [Methanococcoides burtonii DSM 6242] gi|91711362|gb|ABE51289.1| Molybdenum formylmethanofuran dehydrogenase subunit F [Methanococcoides burtonii DSM 6242] Length = 340 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 7/46 (15%) Query: 17 CVEVCPVDCFYE-----GENF--LAIHPDECIDCGVCEPECPVDAI 55 CV+VCP + + GE +A PD CI CG C CPV+AI Sbjct: 181 CVDVCPCNALFNPEWAPGERVDKVAQRPDACIYCGACAVSCPVNAI 226 >gi|73670980|ref|YP_306995.1| hypothetical protein Mbar_A3546 [Methanosarcina barkeri str. Fusaro] gi|72398142|gb|AAZ72415.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 438 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 25/52 (48%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ CK +E CP+ EN +P+ C +CG+C C +A + Sbjct: 331 EKCLNCKDCLVIEACPMGAVSRRENGAVHNPEFCFNCGLCISRCRGEAFSAN 382 >gi|89109287|ref|AP_003067.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. W3110] gi|90111444|ref|NP_416976.4| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|170082091|ref|YP_001731411.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|238901646|ref|YP_002927442.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BW2952] gi|256021833|ref|ZP_05435698.1| hydrogenase 4, 4Fe-4S subunit [Escherichia sp. 4_1_40B] gi|301023842|ref|ZP_07187575.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|307139115|ref|ZP_07498471.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli H736] gi|140645|sp|P23481|HYFA_ECOLI RecName: Full=Hydrogenase-4 component A gi|147018|gb|AAB88563.1| HyfA [Escherichia coli] gi|1799909|dbj|BAA16359.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K12 substr. W3110] gi|87082114|gb|AAC75534.2| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|169889926|gb|ACB03633.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|238861459|gb|ACR63457.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BW2952] gi|260448440|gb|ACX38862.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|299880642|gb|EFI88853.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|315137104|dbj|BAJ44263.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli DH1] gi|315615724|gb|EFU96356.1| hydrogenase-4 component A [Escherichia coli 3431] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|331002403|ref|ZP_08325921.1| hypothetical protein HMPREF0491_00783 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410219|gb|EGG89653.1| hypothetical protein HMPREF0491_00783 [Lachnospiraceae oral taxon 107 str. F0167] Length = 314 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-----PDECIDCGVCEPECPVD 53 V+ I C +CP+ FY N + + D+C++CG+CE C +D Sbjct: 201 VIVALSIFTYRPFCRYICPLGAFYSFFNKIGFYKMEFVSDKCVNCGLCERSCKMD 255 >gi|319942142|ref|ZP_08016460.1| 4Fe-4S ferredoxin-type protein [Sutterella wadsworthensis 3_1_45B] gi|319804352|gb|EFW01236.1| 4Fe-4S ferredoxin-type protein [Sutterella wadsworthensis 3_1_45B] Length = 266 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 IHPD C CG+CE CP D + I S Y W E P + + Sbjct: 178 IHPDACTGCGLCEKGCPTDEASIRVADPRGVLGTIGSHYRLSW-----LSEDDPKNTRRE 232 Query: 95 GVKQKYEKYFSPNPGGKNT 113 +K PNP + Sbjct: 233 TTPEKSISKNDPNPASDSA 251 >gi|311696982|gb|ADP99855.1| oxidoreductase, FAD/iron-sulfur cluster-binding domain protein [marine bacterium HP15] Length = 938 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + + +W I + Sbjct: 538 DKCIECGFCEPVCPSEGLTLSPRQRIVIWRDIQA 571 >gi|300921411|ref|ZP_07137771.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|331653906|ref|ZP_08354907.1| hydrogenase-4 component A [Escherichia coli M718] gi|300411645|gb|EFJ94955.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|331048755|gb|EGI20831.1| hydrogenase-4 component A [Escherichia coli M718] Length = 218 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|218705980|ref|YP_002413499.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli UMN026] gi|218433077|emb|CAR13972.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli UMN026] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|170683521|ref|YP_001744664.1| hydrogenase-4 component A [Escherichia coli SMS-3-5] gi|170521239|gb|ACB19417.1| hydrogenase-4 component A [Escherichia coli SMS-3-5] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|121534160|ref|ZP_01665985.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307263|gb|EAX48180.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 272 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVD 53 C C CV+VCP ++ + +A+ ++CI CG C CP + Sbjct: 74 QCFHCGEAACVKVCPSGALFKTKTGIVAVDREKCIACGYCHNACPFN 120 >gi|221066934|ref|ZP_03543039.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni KF-1] gi|220711957|gb|EED67325.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni KF-1] Length = 224 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 9/72 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK-----PDTEPG 62 CI C T C++ CP D + + D C C +C P CPVD I+ DT G Sbjct: 94 CIGC--TLCIKACPTDAILGANKRMHTVIADHCTGCELCIPVCPVDCIELINASADTT-G 150 Query: 63 LELWLKINSEYA 74 W +E+A Sbjct: 151 WSAWSAAQAEHA 162 >gi|56698380|ref|YP_168753.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56680117|gb|AAV96783.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 268 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 99 KSCLHCEDAPCVTVCPTGASYKRSEDGIVLVNESDCIGCGLCAWACPYGARELDLAEGV 157 >gi|78355728|ref|YP_387177.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218133|gb|ABB37482.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 285 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA 54 C+ C+ CVE CP ++ + I P CI CG C P CP A Sbjct: 61 CMHCESPTCVEACPTGATWKDRETGIVEIDPALCIGCGNCIPACPYGA 108 >gi|51894277|ref|YP_076968.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] gi|51857966|dbj|BAD42124.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] Length = 149 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + E CI C T CV VCP + E + I P CIDC C CPV AI Sbjct: 1 MPHYIDEKCIGC--TACVSVCPTEAISGERKQLHYIDPKLCIDCDACVRSCPVLAI 54 >gi|299149444|ref|ZP_07042501.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_23] gi|298512631|gb|EFI36523.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_23] Length = 489 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|297583775|ref|YP_003699555.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297142232|gb|ADH98989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 179 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA 54 +V C+ C CV+VC ++ E +A +PD+C C C CP DA Sbjct: 53 IVPVQCMHCDDAPCVKVCSTQATFKVEENGIVAFNPDKCTGCKACMAACPYDA 105 >gi|119870982|ref|YP_940934.1| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. KMS] gi|161407219|ref|YP_642026.2| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. MCS] gi|119697071|gb|ABL94144.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] Length = 559 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIK--PDT 59 NC C C CP D EG + D C CG C +CPV AI+ P+T Sbjct: 504 NCFECD--GCYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPET 558 >gi|126437798|ref|YP_001073489.1| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. JLS] gi|126237598|gb|ABO00999.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 558 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIK--PDT 59 NC C C CP D EG + D C CG C +CPV AI+ P+T Sbjct: 504 NCFECD--GCYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPET 558 >gi|82777689|ref|YP_404038.1| NADH dehydrogenase subunit I [Shigella dysenteriae Sd197] gi|110287773|sp|Q32DQ8|NUOI_SHIDS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81241837|gb|ABB62547.1| NADH dehydrogenase I chain I [Shigella dysenteriae Sd197] Length = 180 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKTETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|14521449|ref|NP_126925.1| putative ATPase RIL [Pyrococcus abyssi GE5] gi|5458668|emb|CAB50155.1| ABC transporter ATP-binding protein [Pyrococcus abyssi GE5] Length = 593 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 20 CGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 70 >gi|187730471|ref|YP_001881273.1| hydrogenase-4 component A [Shigella boydii CDC 3083-94] gi|187427463|gb|ACD06737.1| hydrogenase-4 component A [Shigella boydii CDC 3083-94] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|330999837|ref|ZP_08323541.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] gi|329573608|gb|EGG55201.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] Length = 201 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDA 54 Y V+ C C CV+VCP ++ + + I +CI CG+C CP A Sbjct: 61 YYVSLGCNHCSGPACVKVCPTKAHHKRAEDGLVVIDATKCIGCGLCAQACPYHA 114 >gi|293410876|ref|ZP_06654452.1| conserved hypothetical protein [Escherichia coli B354] gi|291471344|gb|EFF13828.1| conserved hypothetical protein [Escherichia coli B354] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|293405917|ref|ZP_06649909.1| hydrogenase-4 component A [Escherichia coli FVEC1412] gi|298381665|ref|ZP_06991264.1| hydrogenase-4 component A [Escherichia coli FVEC1302] gi|300897640|ref|ZP_07116044.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|291428125|gb|EFF01152.1| hydrogenase-4 component A [Escherichia coli FVEC1412] gi|298279107|gb|EFI20621.1| hydrogenase-4 component A [Escherichia coli FVEC1302] gi|300358616|gb|EFJ74486.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] Length = 218 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|288931037|ref|YP_003435097.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893285|gb|ADC64822.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 354 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++E CI C+ +CV CPVD AI+ D+CI C +CE CP + I+ Sbjct: 114 ISEGCIECR--NCVMFCPVDAVRIERGSPAINEDKCIYCEICEYVCPKNVIE 163 >gi|253571979|ref|ZP_04849384.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838576|gb|EES66662.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 489 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|237723391|ref|ZP_04553872.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447913|gb|EEO53704.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 489 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|257790284|ref|YP_003180890.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830097|ref|ZP_08163554.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474181|gb|ACV54501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487564|gb|EGC90002.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 227 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 TY +T C C++ +CV+VCP ++ E+ + I +CI C C CP + E Sbjct: 57 TYFLTVQCQHCENPECVKVCPTGASHKLEDGTVQIDKSKCIGCQFCAMSCPYSVRYLNEE 116 Query: 61 PGL 63 G+ Sbjct: 117 EGV 119 >gi|222034581|emb|CAP77323.1| electron transport protein ygfS [Escherichia coli LF82] gi|312947418|gb|ADR28245.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 162 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|163737101|ref|ZP_02144519.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] gi|161389705|gb|EDQ14056.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] Length = 264 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ CI CG+C CP A + D G+ Sbjct: 86 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESNCIGCGLCAWSCPYGARELDLAEGV 144 >gi|221069698|ref|ZP_03545803.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni KF-1] gi|220714721|gb|EED70089.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni KF-1] Length = 433 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHD 40 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRC--NTCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 >gi|193064781|ref|ZP_03045859.1| hydrogenase-4 component A [Escherichia coli E22] gi|194427266|ref|ZP_03059816.1| hydrogenase-4 component A [Escherichia coli B171] gi|218555007|ref|YP_002387920.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI1] gi|260845115|ref|YP_003222893.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O103:H2 str. 12009] gi|260856576|ref|YP_003230467.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O26:H11 str. 11368] gi|260869171|ref|YP_003235573.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O111:H- str. 11128] gi|307312525|ref|ZP_07592158.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|192927664|gb|EDV82280.1| hydrogenase-4 component A [Escherichia coli E22] gi|194414587|gb|EDX30859.1| hydrogenase-4 component A [Escherichia coli B171] gi|218361775|emb|CAQ99372.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI1] gi|257755225|dbj|BAI26727.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O26:H11 str. 11368] gi|257760262|dbj|BAI31759.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O103:H2 str. 12009] gi|257765527|dbj|BAI37022.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O111:H- str. 11128] gi|306907448|gb|EFN37952.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|315061800|gb|ADT76127.1| hydrogenase 4, membrane subunit [Escherichia coli W] gi|323156083|gb|EFZ42242.1| hydrogenase-4 component A [Escherichia coli EPECa14] gi|323159332|gb|EFZ45317.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323177399|gb|EFZ62987.1| hydrogenase-4 component A [Escherichia coli 1180] gi|323377619|gb|ADX49887.1| hydrogenase 4 Fe-S subunit [Escherichia coli KO11] Length = 205 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|219667681|ref|YP_002458116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537941|gb|ACL19680.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 178 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIK 56 ++ +C+ C C VCP + + E+ L I D+C+ CG C CP A K Sbjct: 55 LSHSCMHCAEPQCASVCPTKAYTKREDGLVIQDHDKCVGCGYCIYACPYQAPK 107 >gi|320176273|gb|EFW51334.1| Hydrogenase-4 component A [Shigella dysenteriae CDC 74-1112] Length = 205 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|320353511|ref|YP_004194850.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122013|gb|ADW17559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 148 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 T +C+ C C VCP + + + C CG C P CPVDAI P+ Sbjct: 47 TGFTAVHCLACTSPPCANVCPTGALVPRKDGGVVVKKKLCNRCGACAPACPVDAIFLDPE 106 Query: 59 TEPGL 63 EP L Sbjct: 107 GEPFL 111 >gi|302548141|ref|ZP_07300483.1| LOW QUALITY PROTEIN: formate dehydrogenase, iron-sulfur subunit [Streptomyces hygroscopicus ATCC 53653] gi|302465759|gb|EFL28852.1| LOW QUALITY PROTEIN: formate dehydrogenase, iron-sulfur subunit [Streptomyces himastatinicus ATCC 53653] Length = 260 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 + ++ C C H C++VCP + E + + D C CG C P CP Sbjct: 100 MSSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACP 148 >gi|300940277|ref|ZP_07154874.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300454918|gb|EFK18411.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 218 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|298387444|ref|ZP_06996996.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 1_1_14] gi|298259651|gb|EFI02523.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 1_1_14] Length = 489 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|240103196|ref|YP_002959505.1| putative ATPase RIL [Thermococcus gammatolerans EJ3] gi|239910750|gb|ACS33641.1| Predicted ATPase, RNase L inhibitor-like protein [Thermococcus gammatolerans EJ3] Length = 590 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 17 CGHFLCERVCPVNRMGGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 67 >gi|163931196|pdb|3BK7|A Chain A, Structure Of The Complete Abce1RNAASE-L Inhibitor Protein From Pyrococcus Abysii Length = 607 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 34 CGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 84 >gi|162148247|ref|YP_001602708.1| NADH-quinone oxidoreductase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|161786824|emb|CAP56407.1| putative NADH-quinone oxidoreductase subunit I [Gluconacetobacter diazotrophicus PAl 5] Length = 149 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 20/90 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC +G ++ I+ CI CG CE CP AI+ Sbjct: 28 ERCVACGL--CAVACPVDCISLQKTEQDGRWYPDYFRINFSRCIFCGFCEEACPTYAIQ- 84 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESL 87 P E+ SEY P++ +KE L Sbjct: 85 -LTPDFEM-----SEYVR--PSLVYEKEDL 106 >gi|281356040|ref|ZP_06242533.1| Ferredoxin hydrogenase [Victivallis vadensis ATCC BAA-548] gi|281317409|gb|EFB01430.1| Ferredoxin hydrogenase [Victivallis vadensis ATCC BAA-548] Length = 463 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ +C+ C CV VCP I +CI+CG C CP AI Sbjct: 111 VSNSCVGCFARPCVGVCPKQAIQVINQRSTIDRTKCINCGKCMTVCPYHAI 161 >gi|167035729|ref|YP_001670960.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida GB-1] gi|166862217|gb|ABZ00625.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida GB-1] Length = 936 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKK 84 D+CI+CG CEP CP + + +W I A Q I T++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIK---AKQRAGIDTRE 581 >gi|11498862|ref|NP_070091.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649316|gb|AAB89980.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 369 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + CI C C+ CP+ N + ++C+ CGVC P CPV+AI+ Sbjct: 285 VDSSKCIACG--ICMLRCPMKAVKAKINREPANVEAEKCLGCGVCVPTCPVEAIELVERE 342 Query: 62 GLELW 66 L+ W Sbjct: 343 ELQEW 347 >gi|317484410|ref|ZP_07943325.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924329|gb|EFV45500.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 179 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECP 51 C+ C CVEVCP + E + + I + C+ CG C+ CP Sbjct: 83 RACVQCPQPRCVEVCPKEALIRRESDGIVFIREEACVGCGACQKACP 129 >gi|312602256|ref|YP_004022101.1| ferredoxin--NADP reductase [Burkholderia rhizoxinica HKI 454] gi|312169570|emb|CBW76582.1| Ferredoxin--NADP reductase (EC 1.18.1.2) [Burkholderia rhizoxinica HKI 454] Length = 406 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CP D N ++ C C C P CP AI Sbjct: 14 CIRC--NTCEETCPNDAITHDANNYVVNAQVCNGCMACVPPCPTGAI 58 >gi|262168762|ref|ZP_06036457.1| sensor kinase CitA [Vibrio cholerae RC27] gi|262022880|gb|EEY41586.1| sensor kinase CitA [Vibrio cholerae RC27] Length = 138 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 14/21 (66%), Positives = 17/21 (80%) Query: 1 MTYVVTENCILCKHTDCVEVC 21 M +VVT+NCI CK+TDCV V Sbjct: 1 MAFVVTDNCIQCKYTDCVAVL 21 >gi|288575149|ref|ZP_06393506.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570890|gb|EFC92447.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 229 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E+C+ C T C + CPV EG+ I P++C+ CGVC +CP AI+ D Sbjct: 170 VREEDCVGC--TICAKACPVGAI-EGKVKEKHVIDPEKCVGCGVCASKCPKGAIEED 223 >gi|256830011|ref|YP_003158739.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579187|gb|ACU90323.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 185 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 C C++ C+ VCPV+ + + E+ + +H E CI CG C CP A Sbjct: 59 CNHCENPTCLNVCPVEAYTKREDGVVVHHQEKCIGCGNCIRSCPYGA 105 >gi|227873120|ref|ZP_03991412.1| possible [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus F0268] gi|227841014|gb|EEJ51352.1| possible [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus F0268] Length = 355 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 7 ENCILCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E LC H DC+ CP Y E +A P++CI C C C +A Sbjct: 113 ETRALCIHCGDCIPGCPTKAIYWEEGRVAFSPEKCIGCDQCIHACTHNA 161 >gi|218890264|ref|YP_002439128.1| electron transport complex protein RnfC [Pseudomonas aeruginosa LESB58] gi|218770487|emb|CAW26252.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 774 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC +VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCAQVCPVSLLPQQLHFFALGNEHEQLLAHNLFDCIECGACAYVCP 419 >gi|160886568|ref|ZP_02067571.1| hypothetical protein BACOVA_04579 [Bacteroides ovatus ATCC 8483] gi|156108453|gb|EDO10198.1| hypothetical protein BACOVA_04579 [Bacteroides ovatus ATCC 8483] Length = 489 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|108772248|gb|ABG10970.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] Length = 545 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIK--PDT 59 NC C C CP D EG + D C CG C +CPV AI+ P+T Sbjct: 490 NCFECD--GCYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPET 544 >gi|74312799|ref|YP_311218.1| NADH dehydrogenase subunit I [Shigella sonnei Ss046] gi|110287774|sp|Q3YZS9|NUOI_SHISS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|73856276|gb|AAZ88983.1| NADH dehydrogenase I chain I [Shigella sonnei Ss046] gi|323168550|gb|EFZ54230.1| NADH-quinone oxidoreductase, chain I family protein [Shigella sonnei 53G] Length = 180 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|331673937|ref|ZP_08374700.1| hydrogenase-4 component A [Escherichia coli TA280] gi|331069210|gb|EGI40602.1| hydrogenase-4 component A [Escherichia coli TA280] Length = 218 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEKAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|326561163|gb|EGE11528.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 7169] gi|326561574|gb|EGE11915.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 46P47B1] gi|326567649|gb|EGE17757.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 12P80B1] gi|326567948|gb|EGE18045.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC1] gi|326569471|gb|EGE19531.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC8] gi|326572766|gb|EGE22752.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC7] gi|326574014|gb|EGE23963.1| NADH dehydrogenase subunit I [Moraxella catarrhalis CO72] gi|326577456|gb|EGE27340.1| NADH dehydrogenase subunit I [Moraxella catarrhalis O35E] Length = 182 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 118 LTPDFELG---------EYDRQ--NLVYEKEHL 139 >gi|313500646|gb|ADR62012.1| D-lactate dehydrogenase (cytochrome) [Pseudomonas putida BIRD-1] Length = 936 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKK 84 D+CI+CG CEP CP + + +W I A Q I T++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVMWRDIQ---AKQRAGIDTRE 581 >gi|302391035|ref|YP_003826855.1| hypothetical protein Acear_0240 [Acetohalobium arabaticum DSM 5501] gi|302203112|gb|ADL11790.1| protein of unknown function DUF362 [Acetohalobium arabaticum DSM 5501] Length = 385 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 ++C C+ C++ CP E ++ +L I EC C C+ CP DAI+ Sbjct: 320 QSCTQCR--TCLDSCPQQVIIEQQDGNNTYLEIDESECSKCLCCQEVCPFDAIE 371 >gi|226940402|ref|YP_002795476.1| tetrathionate reductase subunit B [Laribacter hongkongensis HLHK9] gi|226715329|gb|ACO74467.1| putative tetrathionate reductase subunit B [Laribacter hongkongensis HLHK9] Length = 239 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 TY++ C C + C+ VCPV F + + + + + C+ C C CP DA I D Sbjct: 88 TYMLPRLCNHCANPPCIPVCPVGATFQQADGTVVVDGERCVGCAYCVQACPYDARFINHD 147 Query: 59 T 59 T Sbjct: 148 T 148 >gi|223038486|ref|ZP_03608780.1| ubiquinol CytoChrome c oxidoreductase, cytochrome b subunit [Campylobacter rectus RM3267] gi|222880343|gb|EEF15430.1| ubiquinol CytoChrome c oxidoreductase, cytochrome b subunit [Campylobacter rectus RM3267] Length = 193 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +T +C C C++VCPV + + EN + +H D+CI CG C CP +I Sbjct: 65 ITHSCHHCDEPACMDVCPVGAYIKLENGIVQPLH-DKCIGCGYCIVACPYGSI 116 >gi|150375766|ref|YP_001312362.1| NADH-quinone oxidoreductase subunit I [Sinorhizobium medicae WSM419] gi|150030313|gb|ABR62429.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium medicae WSM419] Length = 211 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C ++CP DC YE E I C+ CG+CE CP DAI Sbjct: 90 KCVACEL--CAQICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 145 >gi|170019234|ref|YP_001724188.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|169754162|gb|ACA76861.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|309702761|emb|CBJ02090.1| hydrogenase-4 component A [Escherichia coli ETEC H10407] gi|320200042|gb|EFW74631.1| Hydrogenase-4 component A [Escherichia coli EC4100B] gi|323941262|gb|EGB37447.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|332344300|gb|AEE57634.1| hydrogenase-4, subunit A HyfA [Escherichia coli UMNK88] Length = 205 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|146312467|ref|YP_001177541.1| NADH dehydrogenase subunit I [Enterobacter sp. 638] gi|145319343|gb|ABP61490.1| NADH dehydrogenase subunit I [Enterobacter sp. 638] Length = 180 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|15599966|ref|NP_253460.1| ferredoxin [Pseudomonas aeruginosa PAO1] gi|254244327|ref|ZP_04937649.1| hypothetical protein PA2G_05180 [Pseudomonas aeruginosa 2192] gi|9951036|gb|AAG08158.1|AE004890_11 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|126197705|gb|EAZ61768.1| hypothetical protein PA2G_05180 [Pseudomonas aeruginosa 2192] Length = 938 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|323967925|gb|EGB63337.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327252131|gb|EGE63803.1| hydrogenase-4 component A [Escherichia coli STEC_7v] Length = 205 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|303257094|ref|ZP_07343108.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|331000953|ref|ZP_08324590.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|302860585|gb|EFL83662.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|329569912|gb|EGG51669.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 211 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + C+H D C+ VCP Y+G + + +CI CG C CP A K + Sbjct: 54 VSCQHCDNPACLPVCPAKAIYKGPHGEVLVDQSKCISCGACAMACPYGAPKFNRSGKTSY 113 Query: 66 W 66 W Sbjct: 114 W 114 >gi|281601885|gb|ADA74869.1| Hydrogenase 4 Fe-S subunit [Shigella flexneri 2002017] Length = 218 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|237712108|ref|ZP_04542589.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|229453429|gb|EEO59150.1| ferredoxin [Bacteroides sp. 9_1_42FAA] Length = 315 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTEPGL 63 +CI C CV+VCP + N I P +C C CE ECP AI+ P +P + Sbjct: 223 SCIGCGK--CVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 64 EL 65 E+ Sbjct: 281 EV 282 >gi|221067205|ref|ZP_03543310.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|220712228|gb|EED67596.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] Length = 235 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 89 LCNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDA 136 >gi|218893867|ref|YP_002442736.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|218774095|emb|CAW29911.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 938 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|162452981|ref|YP_001615348.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sorangium cellulosum 'So ce 56'] gi|161163563|emb|CAN94868.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sorangium cellulosum 'So ce 56'] Length = 300 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + C C + CV+VCPV + E + +A+ + CI C CE CP A + Sbjct: 149 YYLPVQCQQCDNAPCVKVCPVQATWKEPDGIVAVDYNWCIGCRYCEAACPYHARR 203 >gi|107103869|ref|ZP_01367787.1| hypothetical protein PaerPA_01004940 [Pseudomonas aeruginosa PACS2] Length = 938 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|254238494|ref|ZP_04931817.1| hypothetical protein PACG_04643 [Pseudomonas aeruginosa C3719] gi|126170425|gb|EAZ55936.1| hypothetical protein PACG_04643 [Pseudomonas aeruginosa C3719] Length = 938 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|116052919|ref|YP_793236.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|115588140|gb|ABJ14155.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] Length = 938 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|15802828|ref|NP_288855.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 EDL933] gi|15832419|ref|NP_311192.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. Sakai] gi|16130216|ref|NP_416784.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. MG1655] gi|24113653|ref|NP_708163.1| NADH dehydrogenase subunit I [Shigella flexneri 2a str. 301] gi|26248668|ref|NP_754708.1| NADH dehydrogenase subunit I [Escherichia coli CFT073] gi|30063707|ref|NP_837878.1| NADH dehydrogenase subunit I [Shigella flexneri 2a str. 2457T] gi|82544759|ref|YP_408706.1| NADH dehydrogenase subunit I [Shigella boydii Sb227] gi|89109099|ref|AP_002879.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. W3110] gi|91211573|ref|YP_541559.1| NADH dehydrogenase subunit I [Escherichia coli UTI89] gi|110642485|ref|YP_670215.1| NADH dehydrogenase subunit I [Escherichia coli 536] gi|110806244|ref|YP_689764.1| NADH dehydrogenase subunit I [Shigella flexneri 5 str. 8401] gi|117624470|ref|YP_853383.1| NADH dehydrogenase subunit I [Escherichia coli APEC O1] gi|157157555|ref|YP_001463624.1| NADH dehydrogenase subunit I [Escherichia coli E24377A] gi|157161769|ref|YP_001459087.1| NADH dehydrogenase subunit I [Escherichia coli HS] gi|168748130|ref|ZP_02773152.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4113] gi|168755033|ref|ZP_02780040.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4401] gi|168761280|ref|ZP_02786287.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4501] gi|168767907|ref|ZP_02792914.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4486] gi|168772993|ref|ZP_02798000.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4196] gi|168780136|ref|ZP_02805143.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4076] gi|168787188|ref|ZP_02812195.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC869] gi|168798451|ref|ZP_02823458.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC508] gi|170019410|ref|YP_001724364.1| NADH dehydrogenase subunit I [Escherichia coli ATCC 8739] gi|170081898|ref|YP_001731218.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. DH10B] gi|170681076|ref|YP_001744479.1| NADH dehydrogenase subunit I [Escherichia coli SMS-3-5] gi|170767587|ref|ZP_02902040.1| NADH-quinone oxidoreductase, I subunit [Escherichia albertii TW07627] gi|187731669|ref|YP_001881102.1| NADH dehydrogenase subunit I [Shigella boydii CDC 3083-94] gi|188493684|ref|ZP_03000954.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 53638] gi|191166474|ref|ZP_03028304.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B7A] gi|191170159|ref|ZP_03031713.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli F11] gi|193062235|ref|ZP_03043330.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E22] gi|193068159|ref|ZP_03049123.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E110019] gi|194427176|ref|ZP_03059727.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B171] gi|194433333|ref|ZP_03065613.1| NADH-quinone oxidoreductase, I subunit [Shigella dysenteriae 1012] gi|194436354|ref|ZP_03068456.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 101-1] gi|195935658|ref|ZP_03081040.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. EC4024] gi|208805658|ref|ZP_03247995.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4206] gi|208814081|ref|ZP_03255410.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4045] gi|208818598|ref|ZP_03258918.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4042] gi|209399174|ref|YP_002271690.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4115] gi|209919729|ref|YP_002293813.1| NADH dehydrogenase subunit I [Escherichia coli SE11] gi|215487494|ref|YP_002329925.1| NADH dehydrogenase subunit I [Escherichia coli O127:H6 str. E2348/69] gi|217326746|ref|ZP_03442829.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. TW14588] gi|218548270|ref|YP_002382061.1| NADH dehydrogenase subunit I [Escherichia fergusonii ATCC 35469] gi|218554837|ref|YP_002387750.1| NADH dehydrogenase subunit I [Escherichia coli IAI1] gi|218559194|ref|YP_002392107.1| NADH dehydrogenase subunit I [Escherichia coli S88] gi|218690441|ref|YP_002398653.1| NADH dehydrogenase subunit I [Escherichia coli ED1a] gi|218695880|ref|YP_002403547.1| NADH dehydrogenase subunit I [Escherichia coli 55989] gi|218700755|ref|YP_002408384.1| NADH dehydrogenase subunit I [Escherichia coli IAI39] gi|218705811|ref|YP_002413330.1| NADH dehydrogenase subunit I [Escherichia coli UMN026] gi|227887337|ref|ZP_04005142.1| NADH dehydrogenase subunit I [Escherichia coli 83972] gi|237704755|ref|ZP_04535236.1| NADH:ubiquinone oxidoreductase [Escherichia sp. 3_2_53FAA] gi|238901456|ref|YP_002927252.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli BW2952] gi|253772797|ref|YP_003035628.1| NADH dehydrogenase subunit I [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162290|ref|YP_003045398.1| NADH dehydrogenase subunit I [Escherichia coli B str. REL606] gi|254794173|ref|YP_003079010.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. TW14359] gi|256017563|ref|ZP_05431428.1| NADH dehydrogenase subunit I [Shigella sp. D9] gi|256022035|ref|ZP_05435900.1| NADH dehydrogenase subunit I [Escherichia sp. 4_1_40B] gi|260844868|ref|YP_003222646.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O103:H2 str. 12009] gi|260856325|ref|YP_003230216.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O26:H11 str. 11368] gi|260869004|ref|YP_003235406.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O111:H- str. 11128] gi|261223265|ref|ZP_05937546.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. FRIK2000] gi|261259185|ref|ZP_05951718.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. FRIK966] gi|291283522|ref|YP_003500340.1| NADH-quinone oxidoreductase subunit I [Escherichia coli O55:H7 str. CB9615] gi|293405747|ref|ZP_06649739.1| NADH-quinone oxidoreductase [Escherichia coli FVEC1412] gi|293410641|ref|ZP_06654217.1| conserved hypothetical protein [Escherichia coli B354] gi|293415574|ref|ZP_06658217.1| NADH dehydrogenase I subunit I [Escherichia coli B185] gi|293446618|ref|ZP_06663040.1| NADH dehydrogenase I subunit I [Escherichia coli B088] gi|297518346|ref|ZP_06936732.1| NADH dehydrogenase subunit I [Escherichia coli OP50] gi|298381430|ref|ZP_06991029.1| NADH-quinone oxidoreductase subunit I [Escherichia coli FVEC1302] gi|300818119|ref|ZP_07098331.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 107-1] gi|300822152|ref|ZP_07102294.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 119-7] gi|300896955|ref|ZP_07115436.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 198-1] gi|300903666|ref|ZP_07121582.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 84-1] gi|300918554|ref|ZP_07135144.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 115-1] gi|300924540|ref|ZP_07140504.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 182-1] gi|300931366|ref|ZP_07146697.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 187-1] gi|300936845|ref|ZP_07151734.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 21-1] gi|300948575|ref|ZP_07162668.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 116-1] gi|300956459|ref|ZP_07168748.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 175-1] gi|300981077|ref|ZP_07175349.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 200-1] gi|300983376|ref|ZP_07176560.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 45-1] gi|301024079|ref|ZP_07187793.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 69-1] gi|301026951|ref|ZP_07190344.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 196-1] gi|301049034|ref|ZP_07196019.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 185-1] gi|301303260|ref|ZP_07209385.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 124-1] gi|301328773|ref|ZP_07221821.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 78-1] gi|301647622|ref|ZP_07247418.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 146-1] gi|306814608|ref|ZP_07448770.1| NADH dehydrogenase subunit I [Escherichia coli NC101] gi|307138945|ref|ZP_07498301.1| NADH dehydrogenase subunit I [Escherichia coli H736] gi|307311159|ref|ZP_07590803.1| NADH-quinone oxidoreductase, chain I [Escherichia coli W] gi|309793160|ref|ZP_07687588.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 145-7] gi|312973460|ref|ZP_07787632.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1827-70] gi|331642919|ref|ZP_08344054.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H736] gi|331647936|ref|ZP_08349028.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M605] gi|331653723|ref|ZP_08354724.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M718] gi|331663795|ref|ZP_08364705.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA143] gi|331668979|ref|ZP_08369827.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA271] gi|331673786|ref|ZP_08374549.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA280] gi|331678227|ref|ZP_08378902.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H591] gi|331683953|ref|ZP_08384549.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H299] gi|332278573|ref|ZP_08390986.1| NADH-quinone oxidoreductase subunit I [Shigella sp. D9] gi|84028753|sp|P0AFD8|NUOI_ECO57 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028754|sp|P0AFD7|NUOI_ECOL6 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028755|sp|P0AFD6|NUOI_ECOLI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028756|sp|P0AFD9|NUOI_SHIFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|110287772|sp|Q31YI0|NUOI_SHIBS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|115502527|sp|Q1R9D6|NUOI_ECOUT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123147879|sp|Q0TFG5|NUOI_ECOL5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123342668|sp|Q0T2K6|NUOI_SHIF8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633517|sp|A1ADC9|NUOI_ECOK1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|12516631|gb|AAG57410.1|AE005460_4 NADH dehydrogenase I chain I [Escherichia coli O157:H7 str. EDL933] gi|26109073|gb|AAN81276.1|AE016763_235 NADH dehydrogenase I chain I [Escherichia coli CFT073] gi|1788617|gb|AAC75341.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. MG1655] gi|13362635|dbj|BAB36588.1| NADH dehydrogenase I chain I [Escherichia coli O157:H7 str. Sakai] gi|24052717|gb|AAN43870.1| NADH dehydrogenase I chain I [Shigella flexneri 2a str. 301] gi|30041962|gb|AAP17688.1| NADH dehydrogenase I chain I [Shigella flexneri 2a str. 2457T] gi|81246170|gb|ABB66878.1| NADH dehydrogenase I chain I [Shigella boydii Sb227] gi|85675342|dbj|BAA16109.2| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K12 substr. W3110] gi|91073147|gb|ABE08028.1| NADH dehydrogenase I chain I [Escherichia coli UTI89] gi|110344077|gb|ABG70314.1| NADH dehydrogenase I chain I [Escherichia coli 536] gi|110615792|gb|ABF04459.1| NADH dehydrogenase I chain I [Shigella flexneri 5 str. 8401] gi|115513594|gb|ABJ01669.1| NADH dehydrogenase I chain I [Escherichia coli APEC O1] gi|157067449|gb|ABV06704.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli HS] gi|157079585|gb|ABV19293.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E24377A] gi|169754338|gb|ACA77037.1| NADH-quinone oxidoreductase, chain I [Escherichia coli ATCC 8739] gi|169889733|gb|ACB03440.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. DH10B] gi|170123921|gb|EDS92852.1| NADH-quinone oxidoreductase, I subunit [Escherichia albertii TW07627] gi|170518794|gb|ACB16972.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli SMS-3-5] gi|187428661|gb|ACD07935.1| NADH-quinone oxidoreductase, I subunit [Shigella boydii CDC 3083-94] gi|187771242|gb|EDU35086.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4196] gi|188017199|gb|EDU55321.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4113] gi|188488883|gb|EDU63986.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 53638] gi|189002016|gb|EDU71002.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4076] gi|189357566|gb|EDU75985.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4401] gi|189362978|gb|EDU81397.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4486] gi|189368249|gb|EDU86665.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4501] gi|189372827|gb|EDU91243.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC869] gi|189379037|gb|EDU97453.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC508] gi|190903434|gb|EDV63153.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B7A] gi|190909675|gb|EDV69260.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli F11] gi|192931901|gb|EDV84500.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E22] gi|192958438|gb|EDV88877.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E110019] gi|194414797|gb|EDX31068.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B171] gi|194418427|gb|EDX34516.1| NADH-quinone oxidoreductase, I subunit [Shigella dysenteriae 1012] gi|194425082|gb|EDX41067.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 101-1] gi|208725459|gb|EDZ75060.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4206] gi|208735358|gb|EDZ84045.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4045] gi|208738721|gb|EDZ86403.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4042] gi|209160574|gb|ACI38007.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4115] gi|209765138|gb|ACI80881.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765140|gb|ACI80882.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765142|gb|ACI80883.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765144|gb|ACI80884.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765146|gb|ACI80885.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209912988|dbj|BAG78062.1| NADH dehydrogenase I chain I [Escherichia coli SE11] gi|215265566|emb|CAS09969.1| NADH: ubiquinone oxidoreductase, chain I [Escherichia coli O127:H6 str. E2348/69] gi|217319113|gb|EEC27538.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. TW14588] gi|218352612|emb|CAU98393.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli 55989] gi|218355811|emb|CAQ88424.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia fergusonii ATCC 35469] gi|218361605|emb|CAQ99197.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli IAI1] gi|218365963|emb|CAR03707.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli S88] gi|218370741|emb|CAR18554.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli IAI39] gi|218428005|emb|CAR08776.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli ED1a] gi|218432908|emb|CAR13802.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli UMN026] gi|222034037|emb|CAP76778.1| NadH-quinone oxidoreductase subunit I [Escherichia coli LF82] gi|226901121|gb|EEH87380.1| NADH:ubiquinone oxidoreductase [Escherichia sp. 3_2_53FAA] gi|227835687|gb|EEJ46153.1| NADH dehydrogenase subunit I [Escherichia coli 83972] gi|238861872|gb|ACR63870.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli BW2952] gi|242377914|emb|CAQ32683.1| NADH:ubiquinone oxidoreductase, chain I, subunit of connecting fragment of NADH dehydrogenase I and NADH:ubiquinone oxidoreductase I [Escherichia coli BL21(DE3)] gi|253323841|gb|ACT28443.1| NADH-quinone oxidoreductase, chain I [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974191|gb|ACT39862.1| NADH dehydrogenase subunit I [Escherichia coli B str. REL606] gi|253978358|gb|ACT44028.1| NADH dehydrogenase subunit I [Escherichia coli BL21(DE3)] gi|254593573|gb|ACT72934.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. TW14359] gi|257754974|dbj|BAI26476.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O26:H11 str. 11368] gi|257760015|dbj|BAI31512.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O103:H2 str. 12009] gi|257765360|dbj|BAI36855.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O111:H- str. 11128] gi|260448626|gb|ACX39048.1| NADH-quinone oxidoreductase, chain I [Escherichia coli DH1] gi|281179368|dbj|BAI55698.1| NADH dehydrogenase I chain I [Escherichia coli SE15] gi|281601722|gb|ADA74706.1| NADH-quinone oxidoreductase subunit I [Shigella flexneri 2002017] gi|284922269|emb|CBG35354.1| NADH-quinone oxidoreductase subunit I [Escherichia coli 042] gi|290763395|gb|ADD57356.1| NADH-quinone oxidoreductase subunit I [Escherichia coli O55:H7 str. CB9615] gi|291323448|gb|EFE62876.1| NADH dehydrogenase I subunit I [Escherichia coli B088] gi|291427955|gb|EFF00982.1| NADH-quinone oxidoreductase [Escherichia coli FVEC1412] gi|291433222|gb|EFF06201.1| NADH dehydrogenase I subunit I [Escherichia coli B185] gi|291471109|gb|EFF13593.1| conserved hypothetical protein [Escherichia coli B354] gi|294489898|gb|ADE88654.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli IHE3034] gi|298278872|gb|EFI20386.1| NADH-quinone oxidoreductase subunit I [Escherichia coli FVEC1302] gi|299879498|gb|EFI87709.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 196-1] gi|300299143|gb|EFJ55528.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 185-1] gi|300307690|gb|EFJ62210.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 200-1] gi|300316729|gb|EFJ66513.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 175-1] gi|300359223|gb|EFJ75093.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 198-1] gi|300396735|gb|EFJ80273.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 69-1] gi|300404322|gb|EFJ87860.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 84-1] gi|300408542|gb|EFJ92080.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 45-1] gi|300414289|gb|EFJ97599.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 115-1] gi|300419258|gb|EFK02569.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 182-1] gi|300451923|gb|EFK15543.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 116-1] gi|300458032|gb|EFK21525.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 21-1] gi|300460828|gb|EFK24321.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 187-1] gi|300525282|gb|EFK46351.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 119-7] gi|300529263|gb|EFK50325.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 107-1] gi|300841434|gb|EFK69194.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 124-1] gi|300844835|gb|EFK72595.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 78-1] gi|301074249|gb|EFK89055.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 146-1] gi|305852002|gb|EFM52454.1| NADH dehydrogenase subunit I [Escherichia coli NC101] gi|306908665|gb|EFN39162.1| NADH-quinone oxidoreductase, chain I [Escherichia coli W] gi|307554343|gb|ADN47118.1| NADH dehydrogenase I chain I [Escherichia coli ABU 83972] gi|307626183|gb|ADN70487.1| NADH dehydrogenase subunit I [Escherichia coli UM146] gi|308123446|gb|EFO60708.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 145-7] gi|309702593|emb|CBJ01921.1| NADH-quinone oxidoreductase subunit I [Escherichia coli ETEC H10407] gi|310332055|gb|EFP99290.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1827-70] gi|312946899|gb|ADR27726.1| NADH dehydrogenase subunit I [Escherichia coli O83:H1 str. NRG 857C] gi|313651104|gb|EFS15503.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri 2a str. 2457T] gi|315061573|gb|ADT75900.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli W] gi|315136915|dbj|BAJ44074.1| NADH-quinone oxidoreductase subunit I [Escherichia coli DH1] gi|315255215|gb|EFU35183.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 85-1] gi|315285919|gb|EFU45357.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 110-3] gi|315292246|gb|EFU51598.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 153-1] gi|315298120|gb|EFU57389.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 16-3] gi|320177163|gb|EFW52175.1| NADH-ubiquinone oxidoreductase chain I [Shigella dysenteriae CDC 74-1112] gi|320178746|gb|EFW53709.1| NADH-ubiquinone oxidoreductase chain I [Shigella boydii ATCC 9905] gi|320183376|gb|EFW58228.1| NADH-ubiquinone oxidoreductase chain I [Shigella flexneri CDC 796-83] gi|320192098|gb|EFW66743.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. EC1212] gi|320196148|gb|EFW70772.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli WV_060327] gi|320199869|gb|EFW74458.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli EC4100B] gi|320641108|gb|EFX10587.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. G5101] gi|320646496|gb|EFX15415.1| NADH dehydrogenase subunit I [Escherichia coli O157:H- str. 493-89] gi|320651593|gb|EFX19973.1| NADH dehydrogenase subunit I [Escherichia coli O157:H- str. H 2687] gi|320657345|gb|EFX25147.1| NADH dehydrogenase subunit I [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663047|gb|EFX30364.1| NADH dehydrogenase subunit I [Escherichia coli O55:H7 str. USDA 5905] gi|320667865|gb|EFX34773.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. LSU-61] gi|323156431|gb|EFZ42586.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli EPECa14] gi|323161615|gb|EFZ47500.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli E128010] gi|323171962|gb|EFZ57606.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli LT-68] gi|323176794|gb|EFZ62384.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1180] gi|323184400|gb|EFZ69776.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1357] gi|323187994|gb|EFZ73289.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli RN587/1] gi|323377847|gb|ADX50115.1| NADH-quinone oxidoreductase, chain I [Escherichia coli KO11] gi|323936571|gb|EGB32858.1| NADH-quinone oxidoreductase [Escherichia coli E1520] gi|323941022|gb|EGB37209.1| NADH-quinone oxidoreductase [Escherichia coli E482] gi|323944794|gb|EGB40860.1| NADH-quinone oxidoreductase [Escherichia coli H120] gi|323952074|gb|EGB47948.1| NADH-quinone oxidoreductase [Escherichia coli H252] gi|323956047|gb|EGB51800.1| NADH-quinone oxidoreductase [Escherichia coli H263] gi|323961464|gb|EGB57074.1| NADH-quinone oxidoreductase [Escherichia coli H489] gi|323967722|gb|EGB63134.1| NADH-quinone oxidoreductase [Escherichia coli M863] gi|323973014|gb|EGB68208.1| NADH-quinone oxidoreductase [Escherichia coli TA007] gi|323977518|gb|EGB72604.1| NADH-quinone oxidoreductase [Escherichia coli TW10509] gi|324006669|gb|EGB75888.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 57-2] gi|324013179|gb|EGB82398.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 60-1] gi|324020877|gb|EGB90096.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 117-3] gi|324112813|gb|EGC06789.1| NADH-quinone oxidoreductase [Escherichia fergusonii B253] gi|324117841|gb|EGC11740.1| NADH-quinone oxidoreductase [Escherichia coli E1167] gi|325496684|gb|EGC94543.1| NADH dehydrogenase subunit I [Escherichia fergusonii ECD227] gi|326339632|gb|EGD63443.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. 1125] gi|326344094|gb|EGD67855.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. 1044] gi|327252551|gb|EGE64210.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli STEC_7v] gi|330912106|gb|EGH40616.1| NADH-ubiquinone oxidoreductase chain 1 [Escherichia coli AA86] gi|331039717|gb|EGI11937.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H736] gi|331043660|gb|EGI15798.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M605] gi|331048572|gb|EGI20648.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M718] gi|331059594|gb|EGI31571.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA143] gi|331064173|gb|EGI36084.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA271] gi|331069059|gb|EGI40451.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA280] gi|331074687|gb|EGI46007.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H591] gi|331078905|gb|EGI50107.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H299] gi|332088411|gb|EGI93529.1| NADH-quinone oxidoreductase, chain I family protein [Shigella boydii 5216-82] gi|332090608|gb|EGI95704.1| NADH-quinone oxidoreductase, chain I family protein [Shigella dysenteriae 155-74] gi|332093681|gb|EGI98739.1| NADH-quinone oxidoreductase, chain I family protein [Shigella boydii 3594-74] gi|332100925|gb|EGJ04271.1| NADH-quinone oxidoreductase subunit I [Shigella sp. D9] gi|332344062|gb|AEE57396.1| NADH-quinone oxidoreductase, chain I [Escherichia coli UMNK88] gi|332755330|gb|EGJ85694.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-671] gi|332756322|gb|EGJ86673.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri 2747-71] gi|332766100|gb|EGJ96310.1| nuoI [Shigella flexneri 2930-71] gi|333001425|gb|EGK20993.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri VA-6] gi|333001967|gb|EGK21533.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-218] gi|333002648|gb|EGK22208.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-272] gi|333016230|gb|EGK35561.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-304] gi|333016532|gb|EGK35862.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-227] Length = 180 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|332981823|ref|YP_004463264.1| Fe-S cluster domain-containing protein [Mahella australiensis 50-1 BON] gi|332699501|gb|AEE96442.1| Fe-S cluster domain protein [Mahella australiensis 50-1 BON] Length = 434 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C C T+C++ CP + I + CIDCG C CP A T+P Sbjct: 14 EKCRGC--TNCIKRCPTEAIRVRAGKANITAERCIDCGECIRVCPYHAKLAVTDP 66 >gi|330503264|ref|YP_004380133.1| NADH dehydrogenase subunit I [Pseudomonas mendocina NK-01] gi|328917550|gb|AEB58381.1| NADH dehydrogenase subunit I [Pseudomonas mendocina NK-01] Length = 182 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 LTPDFEMG 125 >gi|301058593|ref|ZP_07199598.1| NADH-quinone oxidoreductase subunit I [delta proteobacterium NaphS2] gi|300447325|gb|EFK11085.1| NADH-quinone oxidoreductase subunit I [delta proteobacterium NaphS2] Length = 171 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E C+ C C VCP DC +G ++ A I+ CI CG CE CP AI Sbjct: 48 AERCVACYL--CSAVCPTDCIAVQGAVAEDGRHYAASFRINFARCIYCGFCEEACPTLAI 105 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 106 QLSPDFEMG 114 >gi|296391599|ref|ZP_06881074.1| ferredoxin [Pseudomonas aeruginosa PAb1] Length = 938 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + LW I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVLWRDIQAK 572 >gi|295097941|emb|CBK87031.1| hypothetical protein ENC_37430 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 291 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 21/110 (19%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK------------------PD 58 C +VCPV F ++ +++ CI+CG C CP +AI D Sbjct: 29 CADVCPVQAFSFTDSSVSVDDSRCIECGDCLFVCPAEAITGITPRKRFLCGDTLVEPFTD 88 Query: 59 TEPGLELWLKINSEYATQWPNITTKK--ESLPSAAKMD-GVKQKYEKYFS 105 PG+ L +++Y ++ +I ++ + L + A+++ ++++ E ++ Sbjct: 89 RAPGVNELLLWHAQYHVRFISIDAEQNPDWLLAIARLNLALRRRGEAAWA 138 >gi|221126279|ref|XP_002164598.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 1399 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 7 ENCILCK--HTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +NCI C H C + +E G+ + DEC+ C +C CPV PDT Sbjct: 852 DNCIQCGRCHIACEDTSHQAITFEKDGKRHFEVKEDECVGCNLCVTVCPV----PDTISL 907 Query: 63 LELWLKIN 70 +L + IN Sbjct: 908 RDLAVAIN 915 >gi|197285164|ref|YP_002151036.1| electron transport complex protein [Proteus mirabilis HI4320] gi|227355594|ref|ZP_03839989.1| NADH dehydrogenase (ubiquinone) [Proteus mirabilis ATCC 29906] gi|194682651|emb|CAR42772.1| electron transport complex protein [Proteus mirabilis HI4320] gi|227164390|gb|EEI49279.1| NADH dehydrogenase (ubiquinone) [Proteus mirabilis ATCC 29906] Length = 208 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +NCI C T C++ CPVD + I D C C +C P CP D I Sbjct: 115 DNCIGC--TKCIQACPVDAIVGATRAMHTIIEDLCTGCDLCVPPCPTDCI 162 >gi|167549680|ref|ZP_02343439.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|198242928|ref|YP_002216391.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937444|gb|ACH74777.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205325199|gb|EDZ13038.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|326624142|gb|EGE30487.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 180 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|156933129|ref|YP_001437045.1| NADH dehydrogenase subunit I [Cronobacter sakazakii ATCC BAA-894] gi|226737391|sp|A7MPB5|NUOI_ENTS8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156531383|gb|ABU76209.1| hypothetical protein ESA_00939 [Cronobacter sakazakii ATCC BAA-894] Length = 180 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|146307442|ref|YP_001187907.1| NADH dehydrogenase subunit I [Pseudomonas mendocina ymp] gi|145575643|gb|ABP85175.1| NADH dehydrogenase subunit I [Pseudomonas mendocina ymp] Length = 182 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTEPG 62 PD E G Sbjct: 118 LTPDFEMG 125 >gi|107103021|ref|ZP_01366939.1| hypothetical protein PaerPA_01004090 [Pseudomonas aeruginosa PACS2] Length = 774 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC +VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCAQVCPVSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCP 419 >gi|24112977|ref|NP_707487.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|110805564|ref|YP_689084.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] gi|24051935|gb|AAN43194.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|110615112|gb|ABF03779.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] Length = 205 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|89896465|ref|YP_519952.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89335913|dbj|BAE85508.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 178 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIK 56 ++ +C+ C C VCP + + E+ L I D+C+ CG C CP A K Sbjct: 55 LSHSCMHCAEPQCASVCPTKAYTKREDGLVIQDHDKCVGCGYCIYACPYQAPK 107 >gi|15598687|ref|NP_252181.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PAO1] gi|17369004|sp|Q9HYB8|RNFC_PSEAE RecName: Full=Electron transport complex protein rnfC gi|9949637|gb|AAG06879.1|AE004770_4 probable ferredoxin [Pseudomonas aeruginosa PAO1] Length = 774 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC +VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCAQVCPVSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCP 419 >gi|188495052|ref|ZP_03002322.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|188490251|gb|EDU65354.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] Length = 205 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYSLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|323977341|gb|EGB72427.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 205 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|308271552|emb|CBX28160.1| hypothetical protein N47_G34840 [uncultured Desulfobacterium sp.] Length = 58 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 MT + + CI C T C+++CP + G++ + + ++CI CG C CPVDAI Sbjct: 1 MTVIDMKICIKC--TGCIDICPESALFLGDDAAIKCNDEKCISCGDCADFCPVDAIS 55 >gi|300922185|ref|ZP_07138322.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300421500|gb|EFK04811.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] Length = 218 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|299066025|emb|CBJ37206.1| putative 4Fe-4S ferredoxin [Ralstonia solanacearum CMR15] Length = 736 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 C LC CV CP + L++ C+ CG+C+ CP DAI Sbjct: 608 CTLC--MACVSACPSQALRDQAERPVLSMIEHNCVQCGLCDTTCPEDAI 654 >gi|157144788|ref|YP_001452107.1| NADH dehydrogenase subunit I [Citrobacter koseri ATCC BAA-895] gi|157081993|gb|ABV11671.1| hypothetical protein CKO_00515 [Citrobacter koseri ATCC BAA-895] Length = 180 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|91227192|ref|ZP_01261651.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio alginolyticus 12G01] gi|91188720|gb|EAS75008.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio alginolyticus 12G01] Length = 228 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 141 >gi|329296025|ref|ZP_08253361.1| NADH dehydrogenase subunit I [Plautia stali symbiont] Length = 180 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|323476480|gb|ADX81718.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus HVE10/4] Length = 363 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKE 85 D E+W + ++Y N+ ++ Sbjct: 326 DYRRPYEMWKENKAKYKEWLKNVRQARK 353 >gi|313904891|ref|ZP_07838263.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] gi|313470324|gb|EFR65654.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] Length = 170 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +AI D CI CG+C+ CP+ AIK D + G Sbjct: 33 RSRGHVAIDVDGCISCGICQLSCPLGAIKVDKKEG 67 >gi|312963109|ref|ZP_07777594.1| FAD linked oxidase-like protein [Pseudomonas fluorescens WH6] gi|311282620|gb|EFQ61216.1| FAD linked oxidase-like protein [Pseudomonas fluorescens WH6] Length = 936 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVIWRDIQAK 572 >gi|218778074|ref|YP_002429392.1| dihydropyrimidine dehydrogenase (NADP(+)) [Desulfatibacillum alkenivorans AK-01] gi|218759458|gb|ACL01924.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Desulfatibacillum alkenivorans AK-01] Length = 695 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 16 DCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECP 51 DCV+ C D G + + ++ D C+ CG CE CP Sbjct: 142 DCVKACLFDAISIGPDGYPVVNADNCVGCGACERACP 178 >gi|157377178|ref|YP_001475778.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319552|gb|ABV38650.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 190 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV+VCP Y GE+ + I D+C+ C C CP V + P+T+ Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVTIKEDKCVGCMYCVAACPYKVRFVNPETK 114 >gi|157371538|ref|YP_001479527.1| NADH dehydrogenase subunit I [Serratia proteamaculans 568] gi|270262807|ref|ZP_06191078.1| NADH-quinone oxidoreductase subunit I [Serratia odorifera 4Rx13] gi|157323302|gb|ABV42399.1| NADH-quinone oxidoreductase, chain I [Serratia proteamaculans 568] gi|270043491|gb|EFA16584.1| NADH-quinone oxidoreductase subunit I [Serratia odorifera 4Rx13] Length = 180 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|229592662|ref|YP_002874781.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens SBW25] gi|229364528|emb|CAY52387.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens SBW25] Length = 936 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVIWRDIQAK 572 >gi|89897072|ref|YP_520559.1| hypothetical protein DSY4326 [Desulfitobacterium hafniense Y51] gi|89336520|dbj|BAE86115.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 460 Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP N I C++CG+C CP AI Sbjct: 93 YSVTDHCQNCVGHFCFTNCPKKAILFINNKAFIDQTRCVECGLCARNCPYHAI 145 >gi|14520613|ref|NP_126088.1| electron transport protein [Pyrococcus abyssi GE5] gi|5457829|emb|CAB49319.1| Electron transport protein, containing 4Fe-4S binding domain [Pyrococcus abyssi GE5] Length = 166 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++C+ D C+E CP L + +EC CG C CP A+K + L Sbjct: 51 VVCRQCDPAPCMEACPTGAIKRENGVLVVSAEECTGCGECVRACPFGAVKLHVRTKVAL 109 >gi|323170257|gb|EFZ55910.1| hydrogenase-4 component A [Escherichia coli LT-68] Length = 200 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 46 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 93 >gi|322831991|ref|YP_004212018.1| NADH-quinone oxidoreductase, chain I [Rahnella sp. Y9602] gi|321167192|gb|ADW72891.1| NADH-quinone oxidoreductase, chain I [Rahnella sp. Y9602] Length = 180 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|227829378|ref|YP_002831157.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus L.S.2.15] gi|229578177|ref|YP_002836575.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.G.57.14] gi|284996746|ref|YP_003418513.1| hypothetical protein LD85_0352 [Sulfolobus islandicus L.D.8.5] gi|227455825|gb|ACP34512.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus L.S.2.15] gi|228008891|gb|ACP44653.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.G.57.14] gi|284444641|gb|ADB86143.1| hypothetical protein LD85_0352 [Sulfolobus islandicus L.D.8.5] Length = 363 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKE 85 D E+W + ++Y N+ ++ Sbjct: 326 DYRRPYEMWKENKAKYKEWLKNVRQARK 353 >gi|255690239|ref|ZP_05413914.1| Fe-hydrogenase large subunit family protein [Bacteroides finegoldii DSM 17565] gi|260624258|gb|EEX47129.1| Fe-hydrogenase large subunit family protein [Bacteroides finegoldii DSM 17565] Length = 489 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|224371568|ref|YP_002605732.1| iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] gi|223694285|gb|ACN17568.1| iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] Length = 375 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 21/45 (46%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C + CP+D + D CI CG+C CP AI + +P Sbjct: 282 CKKRCPMDAISIKNKRAVLDLDRCIGCGLCVSTCPEKAIHLERKP 326 >gi|212691452|ref|ZP_03299580.1| hypothetical protein BACDOR_00944 [Bacteroides dorei DSM 17855] gi|237726262|ref|ZP_04556743.1| ferredoxin [Bacteroides sp. D4] gi|212666062|gb|EEB26634.1| hypothetical protein BACDOR_00944 [Bacteroides dorei DSM 17855] gi|229434788|gb|EEO44865.1| ferredoxin [Bacteroides dorei 5_1_36/D4] Length = 315 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK----PDTEPGL 63 +CI C CV+VCP + N I P +C C CE ECP AI+ P +P + Sbjct: 223 SCIGCGK--CVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 64 EL 65 E+ Sbjct: 281 EV 282 >gi|170749599|ref|YP_001755859.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656121|gb|ACB25176.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 675 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C LC CV CP + + L C+ CG+C CP D I + Sbjct: 523 DCTLC--LACVSACPTHALSDSAEQPLLGFEESLCVQCGLCAATCPEDVITLRPQVDFAA 580 Query: 66 W 66 W Sbjct: 581 W 581 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 8/52 (15%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H T C++VCP + + I P C CG C CP A Sbjct: 272 LCAHSRSRITGCTRCLDVCPTGAIAPAGDTVRIDPYVCAGCGSCAALCPTGA 323 >gi|168208932|ref|ZP_02634557.1| F420H2:quinone oxidoreductase [Clostridium perfringens B str. ATCC 3626] gi|170712785|gb|EDT24967.1| F420H2:quinone oxidoreductase [Clostridium perfringens B str. ATCC 3626] Length = 389 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDC----FYEGE-NFLAIHPDECIDCGVCEPECPV 52 E C +C+ C+ +CP +C F + E N+ I+ +CIDCG C CPV Sbjct: 8 ERCTICQA--CINICPKECIKLDFVKEEFNYPIINKIKCIDCGACYKVCPV 56 >gi|37526279|ref|NP_929623.1| electron transport complex protein RnfB [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785710|emb|CAE14694.1| Electron transport complex protein RnfB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 210 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ ENCI C T C++ CPVD + I D C C +C CP D I Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIVGATRAMHTIVEDLCTGCDLCVAPCPTDCI 162 >gi|325299905|ref|YP_004259822.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides salanitronis DSM 18170] gi|324319458|gb|ADY37349.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides salanitronis DSM 18170] Length = 297 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P +C C CE ECP AI Sbjct: 218 TAACIGCGK--CVKVCPFEAITLENNLAYIDPAKCKSCRKCETECPQGAI 265 >gi|325271538|ref|ZP_08138051.1| FAD linked oxidase-like protein [Pseudomonas sp. TJI-51] gi|324103313|gb|EGC00647.1| FAD linked oxidase-like protein [Pseudomonas sp. TJI-51] Length = 951 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVIWRDIQAK 572 >gi|317492616|ref|ZP_07951043.1| NADH-quinone oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919366|gb|EFV40698.1| NADH-quinone oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 180 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|302387721|ref|YP_003823543.1| NADH dehydrogenase (quinone) [Clostridium saccharolyticum WM1] gi|302198349|gb|ADL05920.1| NADH dehydrogenase (quinone) [Clostridium saccharolyticum WM1] Length = 595 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ E C C T C CPV+ +N I P++CI CGVC +C DA+ Sbjct: 541 YIDAEKCKGC--TLCARNCPVNAISGSVKNPHVIDPEKCIKCGVCMEKCKFDAV 592 >gi|296112939|ref|YP_003626877.1| NADH-quinone oxidoreductase subunit I [Moraxella catarrhalis RH4] gi|295920633|gb|ADG60984.1| NADH-quinone oxidoreductase subunit I [Moraxella catarrhalis RH4] Length = 182 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q N+ +KE L Sbjct: 118 LTPDFELG---------EYDRQ--NLVYEKEHL 139 >gi|300087813|ref|YP_003758335.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527546|gb|ADJ26014.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 1119 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 ++ VV ENC C + CV+ CP D E + + P C CGVC CP Sbjct: 1039 ISQVVDENCDGCAY--CVDPCPYDAISLIEYRKNGETKKTVEADPMRCHGCGVCMATCPK 1096 Query: 53 DAI 55 I Sbjct: 1097 QGI 1099 >gi|293373213|ref|ZP_06619575.1| iron only hydrogenase large subunit, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292631861|gb|EFF50477.1| iron only hydrogenase large subunit, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 489 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|291618182|ref|YP_003520924.1| NuoI [Pantoea ananatis LMG 20103] gi|291153212|gb|ADD77796.1| NuoI [Pantoea ananatis LMG 20103] gi|327394575|dbj|BAK11997.1| NADH-quinone oxidoreductase chain I NuoI [Pantoea ananatis AJ13355] Length = 180 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFELG 123 >gi|222834638|gb|EEE73101.1| predicted protein [Populus trichocarpa] Length = 187 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ CG C CP DA Sbjct: 61 LCNHCDNPPCVPVCPVQATFQRSDGIVLVDNERCVGCGYCVQACPYDA 108 >gi|119475395|ref|ZP_01615748.1| ferredoxin [marine gamma proteobacterium HTCC2143] gi|119451598|gb|EAW32831.1| ferredoxin [marine gamma proteobacterium HTCC2143] Length = 85 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 11/86 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++T+ CI C C VCP + Y+G+ I P C +C C+ CPVD Sbjct: 1 MSLIITDECINCDV--CEPVCPNEAIYQGDEIYEIDPALCTECVGHFDEPQCQTVCPVDC 58 Query: 55 IKPD---TEPGLELWLKINSEYATQW 77 I D E L+L K A + Sbjct: 59 IPKDPNRQESQLQLLSKYRQLIAAEQ 84 >gi|29347244|ref|NP_810747.1| putative hydrogenase [Bacteroides thetaiotaomicron VPI-5482] gi|29339143|gb|AAO76941.1| putative hydrogenase [Bacteroides thetaiotaomicron VPI-5482] Length = 482 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 105 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 160 >gi|24113810|ref|NP_708320.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 301] gi|30063859|ref|NP_838030.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|110806414|ref|YP_689934.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 5 str. 8401] gi|24052897|gb|AAN44027.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 301] gi|30042114|gb|AAP17840.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|110615962|gb|ABF04629.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 5 str. 8401] gi|313650937|gb|EFS15337.1| hydrogenase-4 component A [Shigella flexneri 2a str. 2457T] gi|332755122|gb|EGJ85487.1| hydrogenase-4 component A [Shigella flexneri 4343-70] gi|332755521|gb|EGJ85885.1| hydrogenase-4 component A [Shigella flexneri K-671] gi|332756570|gb|EGJ86921.1| hydrogenase-4 component A [Shigella flexneri 2747-71] gi|332766287|gb|EGJ96497.1| 4Fe-4S binding domain protein [Shigella flexneri 2930-71] gi|333001869|gb|EGK21435.1| hydrogenase-4 component A [Shigella flexneri K-218] gi|333016253|gb|EGK35584.1| hydrogenase-4 component A [Shigella flexneri K-304] Length = 205 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|57640966|ref|YP_183444.1| putative ATPase RIL [Thermococcus kodakarensis KOD1] gi|57159290|dbj|BAD85220.1| predicted ATPase, RNase L inhibitor homolog [Thermococcus kodakarensis KOD1] Length = 594 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 17 CGHFLCERVCPVNRMGGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 67 >gi|16761246|ref|NP_456863.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765648|ref|NP_461263.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141058|ref|NP_804400.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412782|ref|YP_149857.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180891|ref|YP_217308.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612951|ref|YP_001586916.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167994669|ref|ZP_02575760.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229690|ref|ZP_02654748.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237338|ref|ZP_02662396.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242439|ref|ZP_02667371.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261663|ref|ZP_02683636.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465976|ref|ZP_02699846.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817949|ref|ZP_02829949.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446441|ref|YP_002041581.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451795|ref|YP_002046374.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469216|ref|ZP_03075200.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738262|ref|YP_002115390.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249761|ref|YP_002147279.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263656|ref|ZP_03163730.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361716|ref|YP_002141352.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386777|ref|ZP_03213389.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929042|ref|ZP_03220185.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353436|ref|YP_002227237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857739|ref|YP_002244390.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213028651|ref|ZP_03343098.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052937|ref|ZP_03345815.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419033|ref|ZP_03352099.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213427017|ref|ZP_03359767.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580776|ref|ZP_03362602.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612295|ref|ZP_03370121.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|224583193|ref|YP_002636991.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912400|ref|ZP_04656237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|75505657|sp|Q57M35|NUOI_SALCH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81678159|sp|Q5PN58|NUOI_SALPA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81706883|sp|Q7CQ51|NUOI_SALTY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81766252|sp|Q8XFD5|NUOI_SALTI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|25282717|pir||AG0796 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420862|gb|AAL21222.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503545|emb|CAD07553.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhi] gi|29136684|gb|AAO68249.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127039|gb|AAV76545.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128524|gb|AAX66227.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362315|gb|ABX66083.1| hypothetical protein SPAB_00657 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405104|gb|ACF65326.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410099|gb|ACF70318.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455580|gb|EDX44419.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713764|gb|ACF92985.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631186|gb|EDX49746.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093192|emb|CAR58636.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213464|gb|ACH50861.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241911|gb|EDY24531.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289600|gb|EDY28963.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603875|gb|EDZ02420.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321586|gb|EDZ06785.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273217|emb|CAR38180.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205327493|gb|EDZ14257.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335833|gb|EDZ22597.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338317|gb|EDZ25081.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345035|gb|EDZ31799.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349680|gb|EDZ36311.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709542|emb|CAR33887.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467720|gb|ACN45550.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247527|emb|CBG25354.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994416|gb|ACY89301.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158879|emb|CBW18392.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913312|dbj|BAJ37286.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086755|emb|CBY96527.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222977|gb|EFX48048.1| NADH-ubiquinone oxidoreductase chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617067|gb|EFY13973.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617627|gb|EFY14526.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624743|gb|EFY21572.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630292|gb|EFY27062.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634473|gb|EFY31206.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639183|gb|EFY35875.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640046|gb|EFY36713.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645733|gb|EFY42257.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651508|gb|EFY47883.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656068|gb|EFY52367.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659421|gb|EFY55668.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665881|gb|EFY62064.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669879|gb|EFY66020.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673865|gb|EFY69962.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678623|gb|EFY74679.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683581|gb|EFY79595.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687657|gb|EFY83627.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715370|gb|EFZ06941.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323193509|gb|EFZ78714.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198414|gb|EFZ83516.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201928|gb|EFZ86990.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208534|gb|EFZ93473.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209757|gb|EFZ94681.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218293|gb|EGA03003.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222949|gb|EGA07298.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227385|gb|EGA11550.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232288|gb|EGA16391.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235678|gb|EGA19762.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241161|gb|EGA25197.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244903|gb|EGA28905.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250022|gb|EGA33916.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251634|gb|EGA35502.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254945|gb|EGA38736.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260325|gb|EGA43944.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268099|gb|EGA51576.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270808|gb|EGA54246.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989254|gb|AEF08237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 180 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|322378418|ref|ZP_08052872.1| ferredoxin [Helicobacter suis HS1] gi|322380977|ref|ZP_08055039.1| ferredoxin [Helicobacter suis HS5] gi|321146595|gb|EFX41433.1| ferredoxin [Helicobacter suis HS5] gi|321149174|gb|EFX43620.1| ferredoxin [Helicobacter suis HS1] Length = 97 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP D + + +I PD C +C C CPVDA Sbjct: 15 MSLLVNQECIACDA--CREECPTDAIDQDDPIYSIDPDRCTECVGYSDEPGCVSVCPVDA 72 Query: 55 IKPD---TEPGLELWLK 68 I D TE EL K Sbjct: 73 IILDPHNTESQEELQYK 89 >gi|302343816|ref|YP_003808345.1| electron transfer flavoprotein alpha/beta-subunit [Desulfarculus baarsii DSM 2075] gi|301640429|gb|ADK85751.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfarculus baarsii DSM 2075] Length = 405 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M ++ +N C C CV+ CP E + +A+ D C CG C CP AI D Sbjct: 1 MALIIDKNLCTGCG--SCVDACPFGAM-ELHDGVAVAGDGCTLCGACVDACPESAIGLDE 57 Query: 60 EPG 62 G Sbjct: 58 PAG 60 >gi|300957169|ref|ZP_07169404.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300316013|gb|EFJ65797.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] Length = 213 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|260173332|ref|ZP_05759744.1| putative hydrogenase [Bacteroides sp. D2] gi|315921605|ref|ZP_07917845.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695480|gb|EFS32315.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 489 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|254477029|ref|ZP_05090415.1| iron-sulfur cluster-binding protein [Ruegeria sp. R11] gi|214031272|gb|EEB72107.1| iron-sulfur cluster-binding protein [Ruegeria sp. R11] Length = 237 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ CI CG+C CP A + D G+ Sbjct: 59 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESNCIGCGLCAWSCPYGARELDLAEGV 117 >gi|153824794|ref|ZP_01977461.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] gi|149741512|gb|EDM55542.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] Length = 553 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|146342337|ref|YP_001207385.1| putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] gi|146195143|emb|CAL79168.1| Putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] Length = 497 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 17/87 (19%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C CV VCP+ +G NF CI+CG+C C K D GL Sbjct: 292 DCVDCGA--CVAVCPIGIDIRQGPNF------ACINCGLCVDACDGVMAKLDRPRGL--- 340 Query: 67 LKINSEYATQWPNITTKKESLPSAAKM 93 I+ E W NI + P +++ Sbjct: 341 --IDYE---SWTNIERGRAGQPRVSRL 362 >gi|331656967|ref|ZP_08357929.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] gi|331055215|gb|EGI27224.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] Length = 205 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 TY ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FTYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|307130992|ref|YP_003883008.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] gi|306528521|gb|ADM98451.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] Length = 196 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V +NCI C T C++ CPVD + + D C C +C P CP D I+ Sbjct: 108 VAWVDEDNCIGC--TKCIQACPVDAIVGTTRAVHTVIRDLCTGCNLCVPPCPTDCIE 162 >gi|296133064|ref|YP_003640311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031642|gb|ADG82410.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 368 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI C T C CP D E I ++CI CG C CP AI Sbjct: 190 VDADKCIGC--TKCTHWCPADAITVNEKVARISEEKCIGCGECTVTCPAHAI 239 >gi|262402832|ref|ZP_06079393.1| ferredoxin [Vibrio sp. RC586] gi|262351614|gb|EEZ00747.1| ferredoxin [Vibrio sp. RC586] Length = 46 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 24/37 (64%) Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++++N+E A WPN+T K ++ AAK DGV K Sbjct: 5 RIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKL 41 >gi|260913682|ref|ZP_05920158.1| hydrogenase-4 component A [Pasteurella dagmatis ATCC 43325] gi|260632221|gb|EEX50396.1| hydrogenase-4 component A [Pasteurella dagmatis ATCC 43325] Length = 200 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++C H D C VCPV+ + + + ++ CI C +C CP AI P Sbjct: 49 LVCHHCDDAPCATVCPVNAIKQVDRTIQLNESLCIGCKLCAIACPFGAITP 99 >gi|229520552|ref|ZP_04409976.1| iron-sulfur cluster-binding protein [Vibrio cholerae TM 11079-80] gi|229342376|gb|EEO07370.1| iron-sulfur cluster-binding protein [Vibrio cholerae TM 11079-80] Length = 553 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|74318034|ref|YP_315774.1| electron transport complex protein RnfB [Thiobacillus denitrificans ATCC 25259] gi|123731760|sp|Q3SHB7|RNFB_THIDA RecName: Full=Electron transport complex protein rnfB gi|74057529|gb|AAZ97969.1| Electron transport complex, RnfABCDGE type, B subunit [Thiobacillus denitrificans ATCC 25259] Length = 188 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + I DEC C +C CPVD I Sbjct: 105 VAFIDEQTCIGC--TLCIQACPVDAISGAAKQMHTIIADECTGCELCLAPCPVDCI 158 >gi|15789981|ref|NP_279805.1| HmoA [Halobacterium sp. NRC-1] gi|169235702|ref|YP_001688902.1| dimethylsulfoxide reductase subunit B (electron transfer protein) [Halobacterium salinarum R1] gi|10580399|gb|AAG19285.1| molybdopterin oxidoreductase [Halobacterium sp. NRC-1] gi|167726768|emb|CAP13554.1| dimethylsulfoxide reductase subunit B (electron transfer protein) [Halobacterium salinarum R1] Length = 262 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDA 54 MTY T C C++ CV+VCPV+ Y + + I D+C+ C C CP +A Sbjct: 64 MTYQPTA-CQHCENAPCVKVCPVNATYTRDDGIVEIDYDKCMGCRYCMAACPYNA 117 >gi|18313641|ref|NP_560308.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|18161189|gb|AAL64490.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] Length = 188 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+H D CV VCP Y+ + + + P+ CI C C CP +A D + GL Sbjct: 61 VQCQHCDNAPCVAVCPTGASYKDVDGLVKMRPELCIGCKYCMVACPYEARWLDEDTGL 118 >gi|21229366|ref|NP_635288.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1] gi|20907953|gb|AAM32960.1| Coenzyme F420 hydrogenase beta subunit [Methanosarcina mazei Go1] Length = 296 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ ENC+ CK C + C + E+ +I ++CI CG C C DA++ + Sbjct: 166 VLEENCVGCKR--CEKACKMGAIKVIEDKASIDTEKCILCGACIAACRKDALRAE 218 >gi|194432127|ref|ZP_03064416.1| hydrogenase-4 component A [Shigella dysenteriae 1012] gi|194419656|gb|EDX35736.1| hydrogenase-4 component A [Shigella dysenteriae 1012] gi|332087922|gb|EGI93047.1| hydrogenase-4 component A [Shigella boydii 5216-82] Length = 205 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|188495190|ref|ZP_03002460.1| hydrogenase-4 component A [Escherichia coli 53638] gi|188490389|gb|EDU65492.1| hydrogenase-4 component A [Escherichia coli 53638] Length = 200 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|303243536|ref|ZP_07329878.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302486097|gb|EFL49019.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 386 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 14/60 (23%) Query: 8 NCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CV+VCP++ E PDE C+ CGVC PECPV+AI Sbjct: 90 HCVLCQK--CVDVCPIEIISIPGLVEKPKKQITIPDEPIAVMDNCVGCGVCVPECPVEAI 147 >gi|288931383|ref|YP_003435443.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893631|gb|ADC65168.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 187 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA 54 C+ C C++VCPV+ ++ E + + D CI CG C CP A Sbjct: 55 QCLHCNDPPCMKVCPVNAIWKREEDGIVLVKKDICIGCGYCASACPFGA 103 >gi|237728156|ref|ZP_04558637.1| cytochrome c-type biogenesis protein [Citrobacter sp. 30_2] gi|226910167|gb|EEH96085.1| cytochrome c-type biogenesis protein [Citrobacter sp. 30_2] Length = 223 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP Y + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|254037077|ref|ZP_04871154.1| formate-dependent nitrite reductase [Escherichia sp. 1_1_43] gi|226840183|gb|EEH72185.1| formate-dependent nitrite reductase [Escherichia sp. 1_1_43] Length = 223 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|150402633|ref|YP_001329927.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033663|gb|ABR65776.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 161 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CILC C+E+CPV+ + D+C+ C C CPVDAIK Sbjct: 36 EICILCDR--CLEICPVNAISSTFPEVPYIDDKCVYCNTCVETCPVDAIK 83 >gi|74313007|ref|YP_311426.1| hydrogenase 4 Fe-S subunit [Shigella sonnei Ss046] gi|301329002|ref|ZP_07222029.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|73856484|gb|AAZ89191.1| hydrogenase 4 Fe-S subunit [Shigella sonnei Ss046] gi|300844636|gb|EFK72396.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] Length = 218 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|15668691|ref|NP_247490.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|48474788|sp|Q57934|Y514_METJA RecName: Full=Uncharacterized polyferredoxin-like protein MJ0514 gi|1591217|gb|AAB98503.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 250 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+E CP++ + + + I+ D+CI CG C CP +AIK Sbjct: 206 CIEECPINAIDQDGDKVKINKDKCILCGRCVDVCPTNAIK 245 >gi|238788647|ref|ZP_04632439.1| NADH-quinone oxidoreductase subunit I [Yersinia frederiksenii ATCC 33641] gi|238723242|gb|EEQ14890.1| NADH-quinone oxidoreductase subunit I [Yersinia frederiksenii ATCC 33641] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|329964944|ref|ZP_08301952.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] gi|328524585|gb|EGF51653.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] Length = 486 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I D CI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAI 169 >gi|315615550|gb|EFU96182.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 3431] Length = 175 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 53 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 110 Query: 57 --PDTEPG 62 PD E G Sbjct: 111 LTPDFEMG 118 >gi|310659596|ref|YP_003937317.1| NADH dehydrogenase (quinone) [Clostridium sticklandii DSM 519] gi|308826374|emb|CBH22412.1| NADH dehydrogenase (Quinone) [Clostridium sticklandii] Length = 576 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + YV+ E C+ C T C + CPV C E + I+ D CI CG C +C DAI Sbjct: 519 IKYVIDPEKCVGC--TVCAKACPVSCISGERKEPHLINQDACIKCGQCYQKCKFDAI 573 >gi|307825404|ref|ZP_07655623.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacter tundripaludum SV96] gi|307733579|gb|EFO04437.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacter tundripaludum SV96] Length = 192 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + +++ E+CI C C+ CPVD + + EC C +C CPVD I Sbjct: 81 VAFIIEEDCIGC--VKCIADCPVDAIVGAAKLMHTVIASECTGCELCIAPCPVDCIIMQA 138 Query: 60 EP 61 P Sbjct: 139 AP 140 >gi|298480728|ref|ZP_06998924.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. D22] gi|298273162|gb|EFI14727.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. D22] Length = 489 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|288559375|ref|YP_003422861.1| CoB--CoM heterodisulfide reductase subunit A HdrA [Methanobrevibacter ruminantium M1] gi|288542085|gb|ADC45969.1| CoB--CoM heterodisulfide reductase subunit A HdrA [Methanobrevibacter ruminantium M1] Length = 660 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 20/77 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDC---FYEGENFL---------------AIHPDECIDCG 44 YV ++C C C EVCP++ + EG + I + CIDCG Sbjct: 246 YVKEDDCTGCGQ--CQEVCPIEIPNYYDEGVGMVKAAYIPFPQAVPLCATIDKNYCIDCG 303 Query: 45 VCEPECPVDAIKPDTEP 61 +CE C DAI D EP Sbjct: 304 LCETVCGPDAIDRDMEP 320 >gi|281181155|dbj|BAI57485.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE15] Length = 223 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|239906941|ref|YP_002953682.1| nitroreductase family protein [Desulfovibrio magneticus RS-1] gi|239796807|dbj|BAH75796.1| nitroreductase family protein [Desulfovibrio magneticus RS-1] Length = 304 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C +CV VCP G+ + + CI CG C CP A+ T PG + W + Sbjct: 16 CVGCG--ECVTVCPSGVLSLGDGLVVVAGAGCIGCGQCRAVCPQCAL---TIPGDDPWAQ 70 >gi|229529443|ref|ZP_04418833.1| iron-sulfur cluster-binding protein [Vibrio cholerae 12129(1)] gi|229333217|gb|EEN98703.1| iron-sulfur cluster-binding protein [Vibrio cholerae 12129(1)] Length = 553 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|167759678|ref|ZP_02431805.1| hypothetical protein CLOSCI_02037 [Clostridium scindens ATCC 35704] gi|167662709|gb|EDS06839.1| hypothetical protein CLOSCI_02037 [Clostridium scindens ATCC 35704] Length = 139 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPD 58 M V + C C C+E CP Y+ E + I D+C C C+ CP DAI+ D Sbjct: 47 MQKNVCDGCTHC--GKCLEACPFGAIYKDEQYGLILTDKDKCRKCRKCQAVCPNDAIRFD 104 Query: 59 TEPGLE 64 + +E Sbjct: 105 ADGKME 110 >gi|145590102|ref|YP_001156699.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048508|gb|ABP35135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 88 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 4/29 (13%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELW 66 DECI+C VCEPECP DAI GLE++ Sbjct: 7 DECINCDVCEPECPNDAIY----MGLEIY 31 >gi|15602251|ref|NP_245323.1| electron transport complex protein RnfB [Pasteurella multocida subsp. multocida str. Pm70] gi|17368782|sp|Q9CNP1|RNFB_PASMU RecName: Full=Electron transport complex protein rnfB gi|12720633|gb|AAK02470.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 198 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD + I PD C C +C P CP D I Sbjct: 107 VAFIDEDMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVPPCPTDCIS 161 >gi|89073353|ref|ZP_01159877.1| electron transport complex protein RnfB [Photobacterium sp. SKA34] gi|89050840|gb|EAR56314.1| electron transport complex protein RnfB [Photobacterium sp. SKA34] Length = 194 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G ++ + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|238794600|ref|ZP_04638207.1| NADH-quinone oxidoreductase subunit I [Yersinia intermedia ATCC 29909] gi|238726086|gb|EEQ17633.1| NADH-quinone oxidoreductase subunit I [Yersinia intermedia ATCC 29909] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|283833812|ref|ZP_06353553.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291070479|gb|EFE08588.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 205 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|261885847|ref|ZP_06009886.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 216 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 23/56 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ C C C VCP ++ +H CI C +C CP AI D+ Sbjct: 49 VMPNQCRQCDDAPCALVCPSSALRNENGYVEMHEQLCIGCALCVNACPYGAIHLDS 104 >gi|227826744|ref|YP_002828523.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.14.25] gi|229583908|ref|YP_002842409.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.27] gi|238618839|ref|YP_002913664.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.4] gi|227458539|gb|ACP37225.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.14.25] gi|228018957|gb|ACP54364.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.27] gi|238379908|gb|ACR40996.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.4] Length = 363 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKE 85 D E+W + ++Y N+ ++ Sbjct: 326 DYRRPYEMWKENKAKYKEWLKNVRQARK 353 >gi|237732312|ref|ZP_04562793.1| NADH dehydrogenase subunit I [Citrobacter sp. 30_2] gi|283832289|ref|ZP_06352030.1| NADH-quinone oxidoreductase subunit I [Citrobacter youngae ATCC 29220] gi|226907851|gb|EEH93769.1| NADH dehydrogenase subunit I [Citrobacter sp. 30_2] gi|291071934|gb|EFE10043.1| NADH-quinone oxidoreductase subunit I [Citrobacter youngae ATCC 29220] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|218691011|ref|YP_002399223.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli ED1a] gi|218428575|emb|CAR09502.2| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli ED1a] Length = 162 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSTCPFGMITIQSLPG 108 >gi|187733852|ref|YP_001882767.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii CDC 3083-94] gi|187430844|gb|ACD10118.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii CDC 3083-94] Length = 223 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|333001614|gb|EGK21182.1| hydrogenase-4 component A [Shigella flexneri VA-6] Length = 205 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|323184464|gb|EFZ69839.1| hydrogenase-4 component A [Escherichia coli 1357] Length = 205 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|331681003|ref|ZP_08381640.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H299] gi|331081224|gb|EGI52385.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H299] Length = 223 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|283786349|ref|YP_003366214.1| NADH-quinone oxidoreductase subunit I [Citrobacter rodentium ICC168] gi|282949803|emb|CBG89426.1| NADH-quinone oxidoreductase subunit I [Citrobacter rodentium ICC168] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|256017375|ref|ZP_05431240.1| hydrogenase 4, 4Fe-4S subunit [Shigella sp. D9] Length = 205 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|238759969|ref|ZP_04621122.1| NADH-quinone oxidoreductase subunit I [Yersinia aldovae ATCC 35236] gi|238701796|gb|EEP94360.1| NADH-quinone oxidoreductase subunit I [Yersinia aldovae ATCC 35236] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|153835285|ref|ZP_01987952.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio harveyi HY01] gi|148868221|gb|EDL67367.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio harveyi HY01] Length = 228 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 141 >gi|123441683|ref|YP_001005667.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. enterocolitica 8081] gi|156633543|sp|A1JLI2|NUOI_YERE8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|122088644|emb|CAL11439.1| NADH Dehydrogenase I chain I [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 180 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|134046811|ref|YP_001098296.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132664436|gb|ABO36082.1| membrane-bound hydrogenase subunit ehbK [Methanococcus maripaludis C5] Length = 481 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 V C+LC+ C++ CP D E F +I +ECI CG C CP DAI Sbjct: 317 VNGGCVLCEV--CIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAI 367 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ENC + + C+EVCP + +G+ F CI CG C ECP AIK + Sbjct: 11 TYEECENCKNKEISKCMEVCPTNAIKMIDGKAF------SCITCGTCAKECPTGAIKKNE 64 Query: 60 EPGLELWLKI 69 G + K+ Sbjct: 65 YGGYYVNRKL 74 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 12/61 (19%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 VTENCILC + C+ CP D E F + E CI+CG+C CP +A+ Sbjct: 225 VTENCILCGN--CISKCPKD-VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDLCPSNAL 281 Query: 56 K 56 + Sbjct: 282 R 282 >gi|77919203|ref|YP_357018.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77545286|gb|ABA88848.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Pelobacter carbinolicus DSM 2380] Length = 486 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 VV + C+ C T C +VCPV+C + + I CI CG C +C DAI Sbjct: 433 VVDQKCVGC--TLCAKVCPVNCISGKPKEVHVIDQAACIKCGACLDKCKFDAI 483 >gi|83590738|ref|YP_430747.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573652|gb|ABC20204.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 228 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 16/28 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 I+PD C+ CG C CP AI + PG Sbjct: 158 INPDRCLACGRCRRVCPAGAIATNEAPG 185 >gi|45359026|ref|NP_988583.1| polyferredoxin [Methanococcus maripaludis S2] gi|45047901|emb|CAF31019.1| polyferredoxin [Methanococcus maripaludis S2] Length = 393 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELWLKINSEYAT 75 N I+P+ C+ CG+C+ CPVDAI K +T L KI E+ + Sbjct: 306 NLPYINPEYCVRCGLCQNACPVDAIDYLKTETSEDLYSKRKIRDEFES 353 >gi|333002267|gb|EGK21831.1| hydrogenase-4 component A [Shigella flexneri K-272] gi|333016088|gb|EGK35420.1| hydrogenase-4 component A [Shigella flexneri K-227] Length = 205 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|331664457|ref|ZP_08365363.1| putative electron transport protein YgfS [Escherichia coli TA143] gi|331058388|gb|EGI30369.1| putative electron transport protein YgfS [Escherichia coli TA143] Length = 151 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 109 >gi|325290604|ref|YP_004266785.1| cobyrinic acid ac-diamide synthase [Syntrophobotulus glycolicus DSM 8271] gi|324966005|gb|ADY56784.1| cobyrinic acid ac-diamide synthase [Syntrophobotulus glycolicus DSM 8271] Length = 295 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLE 64 CI C C+E C + + + + EC CGVCE CPV AI +PD L Sbjct: 67 RKCISCGL--CLEYCRFNAIKKNNSQYEVSCYECEGCGVCEAFCPVQAISLQPDKAGELR 124 Query: 65 LWL 67 L++ Sbjct: 125 LYM 127 >gi|323473828|gb|ADX84434.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus REY15A] Length = 363 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKE 85 D E+W + ++Y N+ ++ Sbjct: 326 DYRRPYEMWKENKAKYKEWLKNVRQARK 353 >gi|300817759|ref|ZP_07097974.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300820857|ref|ZP_07101007.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300903489|ref|ZP_07121414.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|301302831|ref|ZP_07208959.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|309794478|ref|ZP_07688901.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|331678465|ref|ZP_08379140.1| hydrogenase-4 component A [Escherichia coli H591] gi|300404521|gb|EFJ88059.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300526610|gb|EFK47679.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300529747|gb|EFK50809.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300841766|gb|EFK69526.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|308121934|gb|EFO59196.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|315256495|gb|EFU36463.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|324020155|gb|EGB89374.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] gi|331074925|gb|EGI46245.1| hydrogenase-4 component A [Escherichia coli H591] Length = 218 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|294789158|ref|ZP_06754397.1| ferredoxin [Simonsiella muelleri ATCC 29453] gi|294482899|gb|EFG30587.1| ferredoxin [Simonsiella muelleri ATCC 29453] Length = 83 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|290967889|ref|ZP_06559439.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Megasphaera genomosp. type_1 str. 28L] gi|290782028|gb|EFD94606.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Megasphaera genomosp. type_1 str. 28L] Length = 1173 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 10/49 (20%) Query: 33 LAIHPDECIDCGVCEPECPVDAI----KPDTEPG-LELWLKINSEYATQ 76 + + D+C++CG C CPVDA+ DTE +ELW YAT+ Sbjct: 736 IVVDQDDCLECGSCVDVCPVDALTMVPNVDTERAKMELWY-----YATE 779 >gi|315505893|ref|YP_004084780.1| formate dehydrogenase beta subunit [Micromonospora sp. L5] gi|315412512|gb|ADU10629.1| formate dehydrogenase beta subunit [Micromonospora sp. L5] Length = 347 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++++ C C H C++VCP + E + + D C CG C CP I Sbjct: 165 MMSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCISACPYGVI 217 >gi|269102198|ref|ZP_06154895.1| electron transport complex protein RnfB [Photobacterium damselae subsp. damselae CIP 102761] gi|268162096|gb|EEZ40592.1| electron transport complex protein RnfB [Photobacterium damselae subsp. damselae CIP 102761] Length = 192 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 7/59 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G AIH DEC C +C CP D I+ Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIVGGTK--AIHTVIKDECTGCKLCVAPCPTDCIE 159 >gi|291326372|ref|ZP_06573930.1| tetrathionate reductase complex, subunit B [Providencia rettgeri DSM 1131] gi|291314566|gb|EFE55019.1| tetrathionate reductase complex, subunit B [Providencia rettgeri DSM 1131] Length = 252 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + +E C+ C C CP DA Sbjct: 106 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNERCVGCAYCVQACPYDA 153 >gi|226328967|ref|ZP_03804485.1| hypothetical protein PROPEN_02869 [Proteus penneri ATCC 35198] gi|225202153|gb|EEG84507.1| hypothetical protein PROPEN_02869 [Proteus penneri ATCC 35198] Length = 189 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDA 54 +T +C C C++VCP D + + E+ + + D+CI C +C CP +A Sbjct: 56 ITMSCNHCDDPQCLKVCPADTYTKREDGIVVQDHDKCIGCQMCIMACPYNA 106 >gi|167758024|ref|ZP_02430151.1| hypothetical protein CLOSCI_00361 [Clostridium scindens ATCC 35704] gi|167664456|gb|EDS08586.1| hypothetical protein CLOSCI_00361 [Clostridium scindens ATCC 35704] Length = 141 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 M+Y +TE CI C T C ++CPV EG + I+ C++CGVC C AI Sbjct: 1 MSYFITEKCIGC--TLCKKLCPVG-AVEGTLKERHRINEKRCVECGVCGRACGQGAI 54 >gi|220918377|ref|YP_002493681.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956231|gb|ACL66615.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 273 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 ++ V + C C+ T C++VCPV Y + + + + CI C C CP + + P+ Sbjct: 139 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGAVLVDGERCIGCAYCVQACPFGSRFLSPE 198 Query: 59 TE 60 T Sbjct: 199 TH 200 >gi|220926639|ref|YP_002501941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219951246|gb|ACL61638.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 960 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + CI CE CP Sbjct: 782 CMHCEHAPCEPVCPVAASVHDGEGLNVQVYNRCIGTRFCEANCP 825 >gi|229583141|ref|YP_002841540.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.N.15.51] gi|228013857|gb|ACP49618.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.N.15.51] Length = 363 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKE 85 D E+W + ++Y N+ ++ Sbjct: 326 DYRRPYEMWKENKAKYKEWLKNVRQARK 353 >gi|28210729|ref|NP_781673.1| ferredoxin [Clostridium tetani E88] gi|28203167|gb|AAO35610.1| rnfB/polyferredoxin [Clostridium tetani E88] Length = 290 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C CPV+ +N I+ D+C+ CG+C +CP AI Sbjct: 217 GCISCGL--CARNCPVEAIEMVDNLPVINYDKCVQCGICVKKCPTKAI 262 >gi|76802482|ref|YP_327490.1| ferredoxin II [Natronomonas pharaonis DSM 2160] gi|76558347|emb|CAI49937.1| ferredoxin II [Natronomonas pharaonis DSM 2160] Length = 109 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 11/72 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHP---DECIDCGVCEPECPV 52 T+V + I C+E CPVD F E+ + P D+CIDC +C CPV Sbjct: 37 THVAVDLDICVGDGACLEDCPVDVFEWIDTPDHPESEQKVTPADEDQCIDCMLCVDVCPV 96 Query: 53 DAIKPDTEPGLE 64 DAI D +PG E Sbjct: 97 DAI--DVDPGRE 106 >gi|22125532|ref|NP_668955.1| NADH dehydrogenase subunit I [Yersinia pestis KIM 10] gi|45442148|ref|NP_993687.1| NADH dehydrogenase subunit I [Yersinia pestis biovar Microtus str. 91001] gi|51596899|ref|YP_071090.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis IP 32953] gi|108808035|ref|YP_651951.1| NADH dehydrogenase subunit I [Yersinia pestis Antiqua] gi|108812305|ref|YP_648072.1| NADH dehydrogenase subunit I [Yersinia pestis Nepal516] gi|145599238|ref|YP_001163314.1| NADH dehydrogenase subunit I [Yersinia pestis Pestoides F] gi|149365546|ref|ZP_01887581.1| NADH Dehydrogenase I chain I [Yersinia pestis CA88-4125] gi|153950602|ref|YP_001400439.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis IP 31758] gi|162421132|ref|YP_001606298.1| NADH dehydrogenase subunit I [Yersinia pestis Angola] gi|165925636|ref|ZP_02221468.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165937677|ref|ZP_02226239.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166008508|ref|ZP_02229406.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213832|ref|ZP_02239867.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399268|ref|ZP_02304792.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422344|ref|ZP_02314097.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424548|ref|ZP_02316301.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470944|ref|ZP_02335648.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis FV-1] gi|170023808|ref|YP_001720313.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis YPIII] gi|186895980|ref|YP_001873092.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis PB1/+] gi|218929634|ref|YP_002347509.1| NADH dehydrogenase subunit I [Yersinia pestis CO92] gi|229838090|ref|ZP_04458249.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895289|ref|ZP_04510463.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Pestoides A] gi|229898650|ref|ZP_04513795.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. India 195] gi|229902649|ref|ZP_04517766.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Nepal516] gi|270490170|ref|ZP_06207244.1| NADH-quinone oxidoreductase, chain I [Yersinia pestis KIM D27] gi|294504362|ref|YP_003568424.1| NADH dehydrogenase subunit I [Yersinia pestis Z176003] gi|81639048|sp|Q669A7|NUOI_YERPS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123072748|sp|Q1C6B6|NUOI_YERPA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123073347|sp|Q1CHQ8|NUOI_YERPN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123777027|sp|Q7CJ89|NUOI_YERPE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633544|sp|A4TM29|NUOI_YERPP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772597|sp|A7FGR1|NUOI_YERP3 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772598|sp|B2K814|NUOI_YERPB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772599|sp|A9R6L4|NUOI_YERPG RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772600|sp|B1JGM0|NUOI_YERPY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21958432|gb|AAM85206.1|AE013767_3 NADH dehydrogenase I chain I [Yersinia pestis KIM 10] gi|45437012|gb|AAS62564.1| NADH Dehydrogenase I chain I [Yersinia pestis biovar Microtus str. 91001] gi|51590181|emb|CAH21818.1| NADH dehydrogenase I chain I [Yersinia pseudotuberculosis IP 32953] gi|108775953|gb|ABG18472.1| NADH Dehydrogenase I chain I [Yersinia pestis Nepal516] gi|108779948|gb|ABG14006.1| NADH Dehydrogenase I chain I [Yersinia pestis Antiqua] gi|115348245|emb|CAL21173.1| NADH Dehydrogenase I chain I [Yersinia pestis CO92] gi|145210934|gb|ABP40341.1| NADH Dehydrogenase I chain I [Yersinia pestis Pestoides F] gi|149291959|gb|EDM42033.1| NADH Dehydrogenase I chain I [Yersinia pestis CA88-4125] gi|152962097|gb|ABS49558.1| NADH-quinone oxidoreductase, I subunit [Yersinia pseudotuberculosis IP 31758] gi|162353947|gb|ABX87895.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis Angola] gi|165914427|gb|EDR33042.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922745|gb|EDR39896.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165992890|gb|EDR45191.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205006|gb|EDR49486.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166958850|gb|EDR55871.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051772|gb|EDR63180.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056430|gb|EDR66199.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750342|gb|ACA67860.1| NADH-quinone oxidoreductase, chain I [Yersinia pseudotuberculosis YPIII] gi|186699006|gb|ACC89635.1| NADH-quinone oxidoreductase, chain I [Yersinia pseudotuberculosis PB1/+] gi|229680096|gb|EEO76195.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Nepal516] gi|229688198|gb|EEO80269.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. India 195] gi|229694456|gb|EEO84503.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701775|gb|EEO89800.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Pestoides A] gi|262362649|gb|ACY59370.1| NADH dehydrogenase subunit I [Yersinia pestis D106004] gi|262366278|gb|ACY62835.1| NADH dehydrogenase subunit I [Yersinia pestis D182038] gi|270338674|gb|EFA49451.1| NADH-quinone oxidoreductase, chain I [Yersinia pestis KIM D27] gi|294354821|gb|ADE65162.1| NADH dehydrogenase subunit I [Yersinia pestis Z176003] gi|320014614|gb|ADV98185.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 180 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|330860328|emb|CBX70641.1| NADH-quinone oxidoreductase subunit I [Yersinia enterocolitica W22703] Length = 137 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|320180465|gb|EFW55396.1| Hydrogenase-4 component A [Shigella boydii ATCC 9905] Length = 205 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|315180297|gb|ADT87211.1| hydrogenase 4 Fe-S subunit [Vibrio furnissii NCTC 11218] Length = 201 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 I+C+H + C VCPV + E+ + + CI C +C CP AI D Sbjct: 49 IMCRHCEDAPCATVCPVHAIKKEEDRILLQETLCIGCTLCAVACPFGAIALD 100 >gi|300924342|ref|ZP_07140319.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 182-1] gi|301330549|ref|ZP_07223159.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 78-1] gi|300419432|gb|EFK02743.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 182-1] gi|300843501|gb|EFK71261.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 78-1] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|284924166|emb|CBG37266.1| cytochrome c-type biogenesis protein [Escherichia coli 042] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|283836636|ref|ZP_06356377.1| cytochrome c nitrite reductase, Fe-S protein [Citrobacter youngae ATCC 29220] gi|291067370|gb|EFE05479.1| cytochrome c nitrite reductase, Fe-S protein [Citrobacter youngae ATCC 29220] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP Y + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACP 136 >gi|302867706|ref|YP_003836343.1| formate dehydrogenase subunit beta [Micromonospora aurantiaca ATCC 27029] gi|302570565|gb|ADL46767.1| formate dehydrogenase beta subunit [Micromonospora aurantiaca ATCC 27029] Length = 347 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++++ C C H C++VCP + E + + D C CG C CP I Sbjct: 165 MMSDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCISACPYGVI 217 >gi|237713804|ref|ZP_04544285.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409289|ref|ZP_06085832.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644700|ref|ZP_06722449.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294805939|ref|ZP_06764806.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229446251|gb|EEO52042.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352741|gb|EEZ01838.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639963|gb|EFF58232.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294446821|gb|EFG15421.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|295085089|emb|CBK66612.1| Iron only hydrogenase large subunit, C-terminal domain [Bacteroides xylanisolvens XB1A] Length = 489 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I D C+ CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAI 167 >gi|256372222|ref|YP_003110046.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidimicrobium ferrooxidans DSM 10331] gi|256008806|gb|ACU54373.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidimicrobium ferrooxidans DSM 10331] Length = 762 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAI----KP 57 V+T+ C C+ +C+ CPV+ + + D C+ C CE CP DAI P Sbjct: 8 VLTDRCAGCQ--ECLIRCPVEAIDLDLDRYVVTVDSARCVGCRQCERVCPFDAIVVAGDP 65 Query: 58 DTEPG 62 PG Sbjct: 66 QVAPG 70 >gi|256823445|ref|YP_003147408.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Kangiella koreensis DSM 16069] gi|256796984|gb|ACV27640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kangiella koreensis DSM 16069] Length = 86 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C CP + Y+GE I PD+C +C C+ CPVD Sbjct: 1 MALKITDECINCDV--CEPECPNEAIYQGEEIYEIDPDKCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I D E + N E ++ +T K Sbjct: 59 IPLDEE-----HPETNEELIVKYEKLTGNK 83 >gi|254286422|ref|ZP_04961380.1| iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] gi|150423589|gb|EDN15532.1| iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] Length = 553 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|148974078|ref|ZP_01811611.1| tetrathionate reductase, subunit B [Vibrionales bacterium SWAT-3] gi|145965775|gb|EDK31023.1| tetrathionate reductase, subunit B [Vibrionales bacterium SWAT-3] Length = 263 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D C++VCPV ++ E+ + + +E C+ C C CP DA Sbjct: 111 LCNHCDNAPCIKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 158 >gi|118594546|ref|ZP_01551893.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylophilales bacterium HTCC2181] gi|118440324|gb|EAV46951.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylophilales bacterium HTCC2181] Length = 82 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G+E++ +IN + T+ Sbjct: 7 DECINCDVCEPECPNDAIY----QGIEIY-EINPKLCTE 40 >gi|262393887|ref|YP_003285741.1| NrfC protein [Vibrio sp. Ex25] gi|262337481|gb|ACY51276.1| NrfC protein [Vibrio sp. Ex25] Length = 228 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 141 >gi|396407|gb|AAC43166.1| ORF_o223 [Escherichia coli str. K-12 substr. MG1655] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|193067862|ref|ZP_03048828.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E110019] gi|192958837|gb|EDV89274.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E110019] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|157161943|ref|YP_001459261.1| hydrogenase-4 component A [Escherichia coli HS] gi|191167653|ref|ZP_03029463.1| hydrogenase-4 component A [Escherichia coli B7A] gi|193068427|ref|ZP_03049390.1| hydrogenase-4 component A [Escherichia coli E110019] gi|209919956|ref|YP_002294040.1| hydrogenase 4 Fe-S subunit [Escherichia coli SE11] gi|218696110|ref|YP_002403777.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli 55989] gi|293446836|ref|ZP_06663258.1| hyfA [Escherichia coli B088] gi|312973284|ref|ZP_07787456.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|331669220|ref|ZP_08370068.1| hydrogenase-4 component A [Escherichia coli TA271] gi|157067623|gb|ABV06878.1| hydrogenase-4 component A [Escherichia coli HS] gi|190902333|gb|EDV62072.1| hydrogenase-4 component A [Escherichia coli B7A] gi|192958379|gb|EDV88819.1| hydrogenase-4 component A [Escherichia coli E110019] gi|209913215|dbj|BAG78289.1| hydrogenase 4 Fe-S subunit [Escherichia coli SE11] gi|218352842|emb|CAU98637.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli 55989] gi|291323666|gb|EFE63094.1| hyfA [Escherichia coli B088] gi|310331879|gb|EFP99114.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|323944700|gb|EGB40767.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|331064414|gb|EGI36325.1| hydrogenase-4 component A [Escherichia coli TA271] Length = 205 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 98 >gi|15804664|ref|NP_290705.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 EDL933] gi|15834308|ref|NP_313081.1| NrfC [Escherichia coli O157:H7 str. Sakai] gi|16131898|ref|NP_418496.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|24115338|ref|NP_709848.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 301] gi|30064661|ref|NP_838832.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 2457T] gi|74314565|ref|YP_312984.1| formate-dependent nitrite reductase [Shigella sonnei Ss046] gi|82546416|ref|YP_410363.1| formate-dependent nitrite reductase complex Fe-S centers [Shigella boydii Sb227] gi|89110793|ref|AP_004573.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. W3110] gi|110807909|ref|YP_691429.1| formate-dependent nitrite reductase [Shigella flexneri 5 str. 8401] gi|157157837|ref|YP_001465576.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E24377A] gi|157163542|ref|YP_001460860.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli HS] gi|168748075|ref|ZP_02773097.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4113] gi|168755247|ref|ZP_02780254.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4401] gi|168760926|ref|ZP_02785933.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4501] gi|168766336|ref|ZP_02791343.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4486] gi|168774435|ref|ZP_02799442.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4196] gi|168780489|ref|ZP_02805496.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4076] gi|168784693|ref|ZP_02809700.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC869] gi|168798260|ref|ZP_02823267.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC508] gi|170021929|ref|YP_001726883.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli ATCC 8739] gi|170083526|ref|YP_001732846.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|188495798|ref|ZP_03003068.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 53638] gi|191168764|ref|ZP_03030541.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B7A] gi|194432233|ref|ZP_03064521.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 1012] gi|195935857|ref|ZP_03081239.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. EC4024] gi|208808344|ref|ZP_03250681.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4206] gi|208811978|ref|ZP_03253307.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4045] gi|208819115|ref|ZP_03259435.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4042] gi|209396255|ref|YP_002273613.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4115] gi|209921558|ref|YP_002295642.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE11] gi|217325897|ref|ZP_03441981.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. TW14588] gi|218556630|ref|YP_002389544.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI1] gi|218697781|ref|YP_002405448.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli 55989] gi|218707694|ref|YP_002415213.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UMN026] gi|238903181|ref|YP_002928977.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BW2952] gi|253775300|ref|YP_003038131.1| cytochrome C nitrite reductase, Fe-S protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164007|ref|YP_003047115.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli B str. REL606] gi|254796092|ref|YP_003080929.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. TW14359] gi|256019721|ref|ZP_05433586.1| formate-dependent nitrite reductase, 4Fe4S subunit [Shigella sp. D9] gi|256024946|ref|ZP_05438811.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia sp. 4_1_40B] gi|260858182|ref|YP_003232073.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O26:H11 str. 11368] gi|260870831|ref|YP_003237233.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O111:H- str. 11128] gi|261225191|ref|ZP_05939472.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261255557|ref|ZP_05948090.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291285489|ref|YP_003502307.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. CB9615] gi|293402711|ref|ZP_06646808.1| cytochrome c nitrite reductase [Escherichia coli FVEC1412] gi|293407806|ref|ZP_06651646.1| cytochrome c nitrite reductase [Escherichia coli B354] gi|293417577|ref|ZP_06660199.1| cytochrome c nitrite reductase [Escherichia coli B185] gi|293476377|ref|ZP_06664785.1| cytochrome c nitrite reductase [Escherichia coli B088] gi|298378240|ref|ZP_06988124.1| formate-dependent nitrite reductase [Escherichia coli FVEC1302] gi|300817994|ref|ZP_07098207.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 107-1] gi|300824670|ref|ZP_07104777.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 119-7] gi|300897486|ref|ZP_07115904.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 198-1] gi|300906393|ref|ZP_07124091.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 84-1] gi|300916948|ref|ZP_07133648.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 115-1] gi|300930495|ref|ZP_07145894.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 187-1] gi|300946659|ref|ZP_07160916.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 116-1] gi|300957506|ref|ZP_07169716.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 175-1] gi|301019230|ref|ZP_07183426.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 196-1] gi|301021611|ref|ZP_07185607.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 69-1] gi|301302762|ref|ZP_07208891.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 124-1] gi|301645068|ref|ZP_07245030.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 146-1] gi|307140763|ref|ZP_07500119.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli H736] gi|307312086|ref|ZP_07591723.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli W] gi|309795881|ref|ZP_07690295.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 145-7] gi|312974130|ref|ZP_07788301.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1827-70] gi|331644815|ref|ZP_08345932.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H736] gi|331655895|ref|ZP_08356883.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M718] gi|331665744|ref|ZP_08366638.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA143] gi|331670938|ref|ZP_08371772.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA271] gi|331680203|ref|ZP_08380862.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H591] gi|332280856|ref|ZP_08393269.1| nrfC [Shigella sp. D9] gi|77416666|sp|P0AAK8|NRFC_ECO57 RecName: Full=Protein nrfC; Flags: Precursor gi|77416667|sp|P0AAK7|NRFC_ECOLI RecName: Full=Protein nrfC; Flags: Precursor gi|77416668|sp|P0AAK9|NRFC_SHIFL RecName: Full=Protein nrfC; Flags: Precursor gi|12519029|gb|AAG59270.1|AE005640_4 formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. EDL933] gi|404304|emb|CAA51043.1| nrfC [Escherichia coli] gi|2367345|gb|AAC77042.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|13364531|dbj|BAB38477.1| formate-dependent nitrite reductase NrfC [Escherichia coli O157:H7 str. Sakai] gi|24054641|gb|AAN45555.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 301] gi|30042920|gb|AAP18643.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 2457T] gi|73858042|gb|AAZ90749.1| formate-dependent nitrite reductase [Shigella sonnei Ss046] gi|81247827|gb|ABB68535.1| formate-dependent nitrite reductase complex Fe-S centers [Shigella boydii Sb227] gi|85676824|dbj|BAE78074.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K12 substr. W3110] gi|110617457|gb|ABF06124.1| NrfC protein [Shigella flexneri 5 str. 8401] gi|157069222|gb|ABV08477.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli HS] gi|157079867|gb|ABV19575.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E24377A] gi|169756857|gb|ACA79556.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli ATCC 8739] gi|169891361|gb|ACB05068.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|187769817|gb|EDU33661.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4196] gi|188017384|gb|EDU55506.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4113] gi|188490997|gb|EDU66100.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 53638] gi|189001818|gb|EDU70804.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4076] gi|189357547|gb|EDU75966.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4401] gi|189364249|gb|EDU82668.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4486] gi|189368569|gb|EDU86985.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4501] gi|189374793|gb|EDU93209.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC869] gi|189379215|gb|EDU97631.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC508] gi|190901191|gb|EDV60963.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B7A] gi|194419436|gb|EDX35517.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 1012] gi|208728145|gb|EDZ77746.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4206] gi|208733255|gb|EDZ81942.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4045] gi|208739238|gb|EDZ86920.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4042] gi|209157655|gb|ACI35088.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4115] gi|209751068|gb|ACI73841.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751070|gb|ACI73842.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751072|gb|ACI73843.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751074|gb|ACI73844.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751076|gb|ACI73845.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209914817|dbj|BAG79891.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE11] gi|217322118|gb|EEC30542.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. TW14588] gi|218354513|emb|CAV01381.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli 55989] gi|218363399|emb|CAR01052.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI1] gi|218434791|emb|CAR15723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UMN026] gi|238861138|gb|ACR63136.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BW2952] gi|242379599|emb|CAQ34421.1| formate-dependent nitrite reductase, 4Fe-4S subunit, subunit of nitrite reductase complex [Escherichia coli BL21(DE3)] gi|253326344|gb|ACT30946.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975908|gb|ACT41579.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli B str. REL606] gi|253980064|gb|ACT45734.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BL21(DE3)] gi|254595492|gb|ACT74853.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. TW14359] gi|257756831|dbj|BAI28333.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O26:H11 str. 11368] gi|257767187|dbj|BAI38682.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O111:H- str. 11128] gi|260451098|gb|ACX41520.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli DH1] gi|281603444|gb|ADA76428.1| putative Fe-S-cluster-containing hydrogenase components 1 [Shigella flexneri 2002017] gi|290765362|gb|ADD59323.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. CB9615] gi|291320830|gb|EFE60272.1| cytochrome c nitrite reductase [Escherichia coli B088] gi|291429626|gb|EFF02640.1| cytochrome c nitrite reductase [Escherichia coli FVEC1412] gi|291430295|gb|EFF03293.1| cytochrome c nitrite reductase [Escherichia coli B185] gi|291472057|gb|EFF14539.1| cytochrome c nitrite reductase [Escherichia coli B354] gi|298280574|gb|EFI22075.1| formate-dependent nitrite reductase [Escherichia coli FVEC1302] gi|299882331|gb|EFI90542.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 196-1] gi|300315756|gb|EFJ65540.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 175-1] gi|300358761|gb|EFJ74631.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 198-1] gi|300397952|gb|EFJ81490.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 69-1] gi|300401841|gb|EFJ85379.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 84-1] gi|300415776|gb|EFJ99086.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 115-1] gi|300453638|gb|EFK17258.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 116-1] gi|300461629|gb|EFK25122.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 187-1] gi|300522853|gb|EFK43922.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 119-7] gi|300529404|gb|EFK50466.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 107-1] gi|300841982|gb|EFK69742.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 124-1] gi|301076634|gb|EFK91440.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 146-1] gi|306907893|gb|EFN38394.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli W] gi|308120542|gb|EFO57804.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 145-7] gi|309704540|emb|CBJ03889.1| cytochrome c-type biogenesis protein [Escherichia coli ETEC H10407] gi|310331664|gb|EFP98920.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1827-70] gi|313648724|gb|EFS13164.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2a str. 2457T] gi|315063396|gb|ADT77723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli W] gi|315138627|dbj|BAJ45786.1| formate-dependent nitrite reductase 4Fe-4S subunit [Escherichia coli DH1] gi|315254754|gb|EFU34722.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 85-1] gi|315617447|gb|EFU98053.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 3431] gi|320174437|gb|EFW49581.1| NrfC protein [Shigella dysenteriae CDC 74-1112] gi|320183144|gb|EFW58004.1| NrfC protein [Shigella flexneri CDC 796-83] gi|320190799|gb|EFW65449.1| NrfC protein [Escherichia coli O157:H7 str. EC1212] gi|320200794|gb|EFW75380.1| NrfC protein [Escherichia coli EC4100B] gi|320638829|gb|EFX08475.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. G5101] gi|320644197|gb|EFX13262.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H- str. 493-89] gi|320649516|gb|EFX18040.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H- str. H 2687] gi|320654912|gb|EFX22873.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660418|gb|EFX27879.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. USDA 5905] gi|320665689|gb|EFX32726.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. LSU-61] gi|323155881|gb|EFZ42049.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli EPECa14] gi|323164520|gb|EFZ50321.1| cytochrome c nitrite reductase, Fe-S protein [Shigella sonnei 53G] gi|323171496|gb|EFZ57142.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli LT-68] gi|323175963|gb|EFZ61555.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1180] gi|323182179|gb|EFZ67589.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1357] gi|323380540|gb|ADX52808.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli KO11] gi|323935563|gb|EGB31894.1| cytochrome c nitrite reductase [Escherichia coli E1520] gi|323940256|gb|EGB36449.1| cytochrome c nitrite reductase [Escherichia coli E482] gi|323946206|gb|EGB42240.1| cytochrome c nitrite reductase [Escherichia coli H120] gi|323960438|gb|EGB56072.1| cytochrome c nitrite reductase [Escherichia coli H489] gi|323965736|gb|EGB61188.1| cytochrome c nitrite reductase [Escherichia coli M863] gi|323969791|gb|EGB65072.1| cytochrome c nitrite reductase [Escherichia coli TA007] gi|323975292|gb|EGB70395.1| cytochrome c nitrite reductase [Escherichia coli TW10509] gi|324017129|gb|EGB86348.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 117-3] gi|324118645|gb|EGC12537.1| cytochrome c nitrite reductase [Escherichia coli E1167] gi|326341879|gb|EGD65662.1| NrfC protein [Escherichia coli O157:H7 str. 1125] gi|326346547|gb|EGD70281.1| NrfC protein [Escherichia coli O157:H7 str. 1044] gi|327250419|gb|EGE62132.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli STEC_7v] gi|331035790|gb|EGI08028.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H736] gi|331046249|gb|EGI18339.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M718] gi|331056795|gb|EGI28789.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA143] gi|331061852|gb|EGI33777.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA271] gi|331071666|gb|EGI43002.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H591] gi|332083567|gb|EGI88787.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii 5216-82] gi|332084228|gb|EGI89431.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 155-74] gi|332087818|gb|EGI92944.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii 3594-74] gi|332103208|gb|EGJ06554.1| nrfC [Shigella sp. D9] gi|332752191|gb|EGJ82583.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-671] gi|332753277|gb|EGJ83658.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2747-71] gi|332764783|gb|EGJ95012.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2930-71] gi|333011118|gb|EGK30532.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-272] gi|333012690|gb|EGK32070.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-227] gi|333014265|gb|EGK33621.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-304] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|320179068|gb|EFW54027.1| NrfC protein [Shigella boydii ATCC 9905] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|313157389|gb|EFR56812.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 290 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP F + + A+ P+ CI CG C CP A++ Sbjct: 13 CIRCGR--CVKVCPSQIFVQEKAGAAVTLHKPENCIVCGHCAAACPTGAVE 61 >gi|168263386|ref|ZP_02685359.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347881|gb|EDZ34512.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP Y + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACP 136 >gi|170682605|ref|YP_001744869.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli SMS-3-5] gi|170520323|gb|ACB18501.1| formate hydrogenlyase, subunit F [Escherichia coli SMS-3-5] Length = 180 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C + CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--SACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|158520198|ref|YP_001528068.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509024|gb|ABW65991.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 355 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 CV+ C + ++ LA+ +PD CI CG+C CP +A+ Sbjct: 285 CVDRCQTNALAMDDDGLAVLNPDRCIGCGLCVITCPSEAL 324 >gi|219667057|ref|YP_002457492.1| hydrogenase large subunit domain protein [Desulfitobacterium hafniense DCB-2] gi|219537317|gb|ACL19056.1| hydrogenase large subunit domain protein [Desulfitobacterium hafniense DCB-2] Length = 454 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP N I C++CG+C CP AI Sbjct: 87 YSVTDHCQNCVGHFCFTNCPKKAILFINNKAFIDQTRCVECGLCARNCPYHAI 139 >gi|332346076|gb|AEE59410.1| cytochrome c nitrite reductase, Fe-S protein NrfC [Escherichia coli UMNK88] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|331699702|ref|YP_004335941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954391|gb|AEA28088.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 75 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 15 TDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI 55 T CV+VCP+D N +H DEC CG C CPVDA+ Sbjct: 24 TLCVDVCPLDSLAIDPETNKAYMHVDECWYCGPCAARCPVDAV 66 >gi|307133274|ref|YP_003885290.1| Electron transport protein hydN [Dickeya dadantii 3937] gi|306530803|gb|ADN00734.1| Electron transport protein hydN [Dickeya dadantii 3937] Length = 177 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ C VCP D + ++ + + CI C C CP AI T P Sbjct: 57 CHQCENAPCASVCPHDALVQHQDSIQVISSRCIGCKSCVIACPFGAINVVTRPS 110 >gi|288561338|ref|YP_003424824.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] gi|288544048|gb|ADC47932.1| glutamate synthase alpha subunit GltA [Methanobrevibacter ruminantium M1] Length = 495 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 12 CKHT-DCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELW 66 CK+ C CP YE + L IH + C+ C +CE CP AI +P + G +W Sbjct: 34 CKNCYSCYSNCP-HGVYEVINDEPLPIHQENCVGCKICEEMCPTHAIYVRPLVDEGRGIW 92 >gi|289578798|ref|YP_003477425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|297545019|ref|YP_003677321.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528511|gb|ADD02863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|296842794|gb|ADH61310.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 123 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CILC C VCP +C E P EC+ CG C CP ++K + E Sbjct: 41 DKCILC--GICQRVCPSNCIQVNRKEGKWVFQPFECVICGACVENCPTKSLKMEAE 94 >gi|161870931|ref|YP_001600111.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis 053442] gi|161596484|gb|ABX74144.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis 053442] gi|308388341|gb|ADO30661.1| putative ferredoxin [Neisseria meningitidis alpha710] gi|325137182|gb|EGC59777.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M0579] Length = 83 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|45358387|ref|NP_987944.1| coenzyme F420-non-reducing hydrogenase subunit beta [Methanococcus maripaludis S2] gi|44921145|emb|CAF30380.1| coenzyme F420-non-reducing hydrogenase subunit beta [Methanococcus maripaludis S2] Length = 397 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 22/109 (20%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------- 55 V ++ CI C DC + CP D E +A+ P C CG+C+ CPVDAI Sbjct: 198 VDSDLCIGC--GDCTDKCPRDLIVLNE-MVAVPPKGCPACGLCKAACPVDAIELVVEYAS 254 Query: 56 -KPDTEPGLELWLKINSEY----ATQWPN-----ITTKKESLPSAAKMD 94 KP T+ G+ +W + Y A + PN + K +PS K + Sbjct: 255 PKPITDEGI-VWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTE 302 >gi|193063017|ref|ZP_03044109.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E22] gi|194426867|ref|ZP_03059420.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B171] gi|260846866|ref|YP_003224644.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O103:H2 str. 12009] gi|192931276|gb|EDV83878.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E22] gi|194415203|gb|EDX31472.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B171] gi|257762013|dbj|BAI33510.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O103:H2 str. 12009] gi|323162159|gb|EFZ48024.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E128010] Length = 223 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|116749279|ref|YP_845966.1| putative PAS/PAC sensor protein [Syntrophobacter fumaroxidans MPOB] gi|116698343|gb|ABK17531.1| putative PAS/PAC sensor protein [Syntrophobacter fumaroxidans MPOB] Length = 572 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSEYA 74 C+ CPV A+ P C+ CG C CP A ++ D E +L + + +A Sbjct: 21 CIRECPVKAIKVENACAAVIPQLCVLCGHCVEVCPNGAKHVRDDLEQARQLLKEKDQVFA 80 Query: 75 TQWPNITTKKESLPSAAKMDGVKQ 98 + P+ ++ +P +A + +K+ Sbjct: 81 SLAPSFVSEFPDIPPSAIIRALKK 104 >gi|332752022|gb|EGJ82415.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 4343-70] gi|332999188|gb|EGK18775.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-218] Length = 223 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHVPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|313683607|ref|YP_004061345.1| ferredoxin-like protein [Sulfuricurvum kujiense DSM 16994] gi|313156467|gb|ADR35145.1| ferredoxin-like protein [Sulfuricurvum kujiense DSM 16994] Length = 361 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 26/43 (60%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C+++CP F+ N L + +EC++C C CP +A++ ++ Sbjct: 33 CIDLCPKGAFHIIRNKLTLFENECVECAGCIGSCPTEALEIES 75 >gi|312897705|ref|ZP_07757122.1| 4Fe-4S binding domain protein [Megasphaera micronuciformis F0359] gi|310621338|gb|EFQ04881.1| 4Fe-4S binding domain protein [Megasphaera micronuciformis F0359] Length = 175 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 22/48 (45%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C+E CP + GE+ + + D C CG C CP D I Sbjct: 58 QCRQCPKPKCMEACPFNAISMGEDSVILDQDICKGCGKCAKACPFDGI 105 >gi|298370606|ref|ZP_06981921.1| ferredoxin [Neisseria sp. oral taxon 014 str. F0314] gi|298281216|gb|EFI22706.1| ferredoxin [Neisseria sp. oral taxon 014 str. F0314] Length = 83 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|290475319|ref|YP_003468207.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus bovienii SS-2004] gi|289174640|emb|CBJ81434.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus bovienii SS-2004] Length = 205 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAI 55 + ++ ENCI C T C++ CPVD AIH D C C +C CP D I Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIIGANR--AIHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|258545781|ref|ZP_05706015.1| electron transport complex, RnfABCDGE type, B subunit [Cardiobacterium hominis ATCC 15826] gi|258518971|gb|EEV87830.1| electron transport complex, RnfABCDGE type, B subunit [Cardiobacterium hominis ATCC 15826] Length = 186 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + +++ + CI C T C++ CPVD + I DEC C +C CPV+ I Sbjct: 112 VAFIIEDWCIGC--TKCIKACPVDAILGSNQKMHTIISDECTGCRLCVDPCPVNCI 165 >gi|258514867|ref|YP_003191089.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778572|gb|ACV62466.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 61 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V +E C+ C C EVCP + F + I+P+ C++CG CE CP +IK Sbjct: 5 VNSETCVAC--ATCFEVCPAEPKVFEVTDYSKVINPEACLECGACEENCPTGSIK 57 >gi|218263700|ref|ZP_03477727.1| hypothetical protein PRABACTJOHN_03417 [Parabacteroides johnsonii DSM 18315] gi|218222557|gb|EEC95207.1| hypothetical protein PRABACTJOHN_03417 [Parabacteroides johnsonii DSM 18315] Length = 268 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ T CI C C+++CP+ F + L CI C +C CP +I Sbjct: 183 VVFLNTSTCINC--GKCIKICPMHIFALKDTVLPTDEKNCIQCRLCADNCPTSSI 235 >gi|222111964|ref|YP_002554228.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|221731408|gb|ACM34228.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 687 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C LC CV CP + L C+ CG+CE CP +AI Sbjct: 556 DRCTLC--LSCVSACPAGALQDNPQAPQLRFTEQNCVQCGLCERTCPENAI 604 >gi|90579149|ref|ZP_01234959.1| electron transport complex protein RnfB [Vibrio angustum S14] gi|90439982|gb|EAS65163.1| electron transport complex protein RnfB [Vibrio angustum S14] Length = 194 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G ++ + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|295103163|emb|CBL00707.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Faecalibacterium prausnitzii SL3/3] Length = 395 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 12 CKHTDCVEVCPVDCFYEGEN---FL--AIHPDECIDCGVCEPECP 51 C T C ++CP +C +N FL ++ D+CI CG+CE CP Sbjct: 12 CGCTACEQICPRNCIQMRKNEEGFLYPVVNNDKCIKCGLCEKVCP 56 >gi|261378974|ref|ZP_05983547.1| ferredoxin [Neisseria cinerea ATCC 14685] gi|296315172|ref|ZP_06865113.1| ferredoxin [Neisseria polysaccharea ATCC 43768] gi|269144589|gb|EEZ71007.1| ferredoxin [Neisseria cinerea ATCC 14685] gi|296837981|gb|EFH21919.1| ferredoxin [Neisseria polysaccharea ATCC 43768] Length = 83 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPSLCTQ 40 >gi|225568281|ref|ZP_03777306.1| hypothetical protein CLOHYLEM_04355 [Clostridium hylemonae DSM 15053] gi|225163000|gb|EEG75619.1| hypothetical protein CLOHYLEM_04355 [Clostridium hylemonae DSM 15053] Length = 88 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E CI C C+ CPV+ + + I D C CG+C ECP +AI E G Sbjct: 34 ETCIACG--TCLLYCPVNSIRKTDGTFTICYDYCKGCGICAHECPKNAITMIPEEG 87 >gi|251798657|ref|YP_003013388.1| dihydropyrimidine dehydrogenase [Paenibacillus sp. JDR-2] gi|247546283|gb|ACT03302.1| dihydroorotate dehydrogenase family protein [Paenibacillus sp. JDR-2] Length = 434 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 13/75 (17%) Query: 7 ENCILCKHT---------DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD-AIK 56 ENCI+C C+E D +G +L + ++C+ C +C CPV+ AI Sbjct: 340 ENCIVCNKCHIACEDTSHQCIERLTTD---DGRAYLKVREEDCVGCNLCSIVCPVEGAIS 396 Query: 57 PDTEPGLELWLKINS 71 P EL + N+ Sbjct: 397 MVEIPSGELPMSWNA 411 >gi|126640817|ref|YP_001083801.1| NADH dehydrogenase subunit I [Acinetobacter baumannii ATCC 17978] gi|213156543|ref|YP_002318204.1| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii AB0057] gi|215484512|ref|YP_002326747.1| NADH-quinone oxidoreductase subunit 9 [Acinetobacter baumannii AB307-0294] gi|213055703|gb|ACJ40605.1| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii AB0057] gi|213988464|gb|ACJ58763.1| NADH-quinone oxidoreductase subunit 9 [Acinetobacter baumannii AB307-0294] gi|322506935|gb|ADX02389.1| nuoI [Acinetobacter baumannii 1656-2] gi|323516802|gb|ADX91183.1| NADH dehydrogenase subunit I [Acinetobacter baumannii TCDC-AB0715] Length = 164 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 25/93 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 42 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 99 Query: 57 --PDTEPGLELWLKINSEYATQWPNITTKKESL 87 PD E G EY Q ++ +KE+L Sbjct: 100 LTPDFELG---------EYVRQ--DLVYEKENL 121 >gi|126459018|ref|YP_001055296.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248739|gb|ABO07830.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 275 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 NC+ C C CP E + I+ D CI CG CE CP + K Sbjct: 91 NCLHCVDAPCARACPAGAIVTTPEGAVVINKDLCIGCGYCENACPFNVPK 140 >gi|77919233|ref|YP_357048.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77919440|ref|YP_357255.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77545316|gb|ABA88878.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] gi|77545523|gb|ABA89085.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] Length = 486 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 VV + C+ C T C +VCPV+C + + I CI CG C +C DAI Sbjct: 433 VVDQKCVGC--TLCAKVCPVNCISGKPKEVHVIDQAACIKCGACLDKCKFDAI 483 >gi|332278371|ref|ZP_08390784.1| hydrogenase 4 Fe-S subunit [Shigella sp. D9] gi|332100723|gb|EGJ04069.1| hydrogenase 4 Fe-S subunit [Shigella sp. D9] Length = 218 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAIS 111 >gi|330996166|ref|ZP_08320056.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] gi|329573670|gb|EGG55261.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] Length = 480 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y VT C C C CP D Y+ E I ++CI CG C CP AI Sbjct: 113 INYEVTNLCRGCAARPCYNNCPKDAIHYDSEGKAYIDHEKCISCGRCHQVCPYHAI 168 >gi|331650093|ref|ZP_08351166.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M605] gi|330908407|gb|EGH36926.1| NrfC protein [Escherichia coli AA86] gi|331041038|gb|EGI13195.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M605] Length = 223 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|251789021|ref|YP_003003742.1| NADH dehydrogenase subunit I [Dickeya zeae Ech1591] gi|271501261|ref|YP_003334286.1| NADH-quinone oxidoreductase subunit I [Dickeya dadantii Ech586] gi|247537642|gb|ACT06263.1| NADH-quinone oxidoreductase, chain I [Dickeya zeae Ech1591] gi|270344816|gb|ACZ77581.1| NADH-quinone oxidoreductase, chain I [Dickeya dadantii Ech586] Length = 180 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|238020170|ref|ZP_04600596.1| hypothetical protein GCWU000324_00041 [Kingella oralis ATCC 51147] gi|237868564|gb|EEP69568.1| hypothetical protein GCWU000324_00041 [Kingella oralis ATCC 51147] Length = 83 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|209695456|ref|YP_002263385.1| cytochrome c-type biogenesis protein NrfC [Aliivibrio salmonicida LFI1238] gi|208009408|emb|CAQ79684.1| cytochrome c-type biogenesis protein NrfC [Aliivibrio salmonicida LFI1238] Length = 228 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENAPCVMVCPTGAAYKDEATGIVDVHNEKCVGCGYCLAACP 143 >gi|315230439|ref|YP_004070875.1| RNase L inhibitor [Thermococcus barophilus MP] gi|315183467|gb|ADT83652.1| RNase L inhibitor [Thermococcus barophilus MP] Length = 590 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP +AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 66 >gi|149201260|ref|ZP_01878235.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|149145593|gb|EDM33619.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 260 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CV VCP Y+ + + ++ +CI CG+C CP A + D G+ Sbjct: 86 KSCLHCDDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDQAEGV 144 >gi|113461042|ref|YP_719109.1| tetrathionate reductase subunit B [Haemophilus somnus 129PT] gi|112823085|gb|ABI25174.1| tetrathionate reductase beta subunit [Haemophilus somnus 129PT] Length = 245 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 LC H D CV VCPV Y+ ++ + I CI C C CP DA ++E Sbjct: 98 LCNHCDNPPCVPVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDARFINSE 151 >gi|26250880|ref|NP_756920.1| NrfC protein [Escherichia coli CFT073] gi|91213615|ref|YP_543601.1| NrfC protein [Escherichia coli UTI89] gi|110644424|ref|YP_672154.1| NrfC protein [Escherichia coli 536] gi|117626354|ref|YP_859677.1| formate-dependent nitire reductase subunit NrfC [Escherichia coli APEC O1] gi|191171961|ref|ZP_03033506.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli F11] gi|215489417|ref|YP_002331848.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218561157|ref|YP_002394070.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli S88] gi|218692364|ref|YP_002400576.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ED1a] gi|227886899|ref|ZP_04004704.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli 83972] gi|237703652|ref|ZP_04534133.1| formate-dependent nitrite reductase subunit NrfC [Escherichia sp. 3_2_53FAA] gi|300973868|ref|ZP_07172357.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 45-1] gi|300980240|ref|ZP_07174898.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 200-1] gi|301051420|ref|ZP_07198230.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 185-1] gi|306815806|ref|ZP_07449951.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli NC101] gi|312965680|ref|ZP_07779909.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 2362-75] gi|331660652|ref|ZP_08361584.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA206] gi|26111312|gb|AAN83494.1|AE016771_5 NrfC protein [Escherichia coli CFT073] gi|91075189|gb|ABE10070.1| NrfC protein [Escherichia coli UTI89] gi|110346016|gb|ABG72253.1| NrfC protein [Escherichia coli 536] gi|115515478|gb|ABJ03553.1| formate-dependent nitire reductase subunit NrfC [Escherichia coli APEC O1] gi|190907726|gb|EDV67320.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli F11] gi|215267489|emb|CAS11943.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218367926|emb|CAR05723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli S88] gi|218429928|emb|CAR10905.2| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ED1a] gi|222035795|emb|CAP78540.1| Protein nrfC [Escherichia coli LF82] gi|226901564|gb|EEH87823.1| formate-dependent nitrite reductase subunit NrfC [Escherichia sp. 3_2_53FAA] gi|227836040|gb|EEJ46506.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli 83972] gi|294489652|gb|ADE88408.1| 4Fe-4S binding domain protein [Escherichia coli IHE3034] gi|300296950|gb|EFJ53335.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 185-1] gi|300307807|gb|EFJ62327.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 200-1] gi|300410678|gb|EFJ94216.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 45-1] gi|305850781|gb|EFM51237.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli NC101] gi|307556236|gb|ADN49011.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ABU 83972] gi|307629137|gb|ADN73441.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UM146] gi|312289654|gb|EFR17545.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 2362-75] gi|312948660|gb|ADR29487.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315287909|gb|EFU47311.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 110-3] gi|315294773|gb|EFU54116.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 153-1] gi|315297484|gb|EFU56763.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 16-3] gi|320193444|gb|EFW68081.1| NrfC protein [Escherichia coli WV_060327] gi|323190048|gb|EFZ75326.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli RN587/1] gi|323950368|gb|EGB46249.1| cytochrome c nitrite reductase [Escherichia coli H252] gi|323954449|gb|EGB50233.1| cytochrome c nitrite reductase [Escherichia coli H263] gi|324009516|gb|EGB78735.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 57-2] gi|324015614|gb|EGB84833.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 60-1] gi|331051694|gb|EGI23733.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA206] Length = 223 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|332968212|gb|EGK07289.1| ferredoxin [Kingella kingae ATCC 23330] Length = 83 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|260655399|ref|ZP_05860887.1| iron-sulfur cluster-binding protein [Jonquetella anthropi E3_33 E1] gi|260629847|gb|EEX48041.1| iron-sulfur cluster-binding protein [Jonquetella anthropi E3_33 E1] Length = 387 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 6/59 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E CI C C CPV G N I +CI C C CPV AI D Sbjct: 211 VAPEECIACGR--CARNCPVRAISMKNPAGANKAFIDQSKCIGCSECMTHCPVSAISID 267 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 17/30 (56%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 L++ P+ECI CG C CPV AI G Sbjct: 209 LSVAPEECIACGRCARNCPVRAISMKNPAG 238 >gi|322421699|ref|YP_004200922.1| Fis family sigma-54 specific transcriptional regulator [Geobacter sp. M18] gi|320128086|gb|ADW15646.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. M18] Length = 760 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T+ C C CV CPV +++ I + CI CG C CP A Sbjct: 7 ITDQCRKC--YSCVRSCPVKAIKVEKSYTEIIFERCIGCGNCLSNCPQHA 54 >gi|242239348|ref|YP_002987529.1| electron transport complex protein RnfB [Dickeya dadantii Ech703] gi|242131405|gb|ACS85707.1| electron transport complex, RnfABCDGE type, B subunit [Dickeya dadantii Ech703] Length = 191 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH---PDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD AIH D C C +C P CP D I+ Sbjct: 108 VAWIDESNCIGC--TKCIQACPVDAIVGSTR--AIHTVISDLCTGCDLCIPPCPTDCIE 162 >gi|238751241|ref|ZP_04612735.1| NADH-quinone oxidoreductase subunit I [Yersinia rohdei ATCC 43380] gi|238710515|gb|EEQ02739.1| NADH-quinone oxidoreductase subunit I [Yersinia rohdei ATCC 43380] Length = 180 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|226329122|ref|ZP_03804640.1| hypothetical protein PROPEN_03025 [Proteus penneri ATCC 35198] gi|225202308|gb|EEG84662.1| hypothetical protein PROPEN_03025 [Proteus penneri ATCC 35198] Length = 209 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP--VDAIKPDTE 60 T+ C CK +C++VCPV E F + + CI C C CP + + P T+ Sbjct: 121 TDTCRQCKDPECMKVCPVKAIRYQEEFGCIVVDTRRCIGCAACTTACPWMMATVNPQTK 179 >gi|241662549|ref|YP_002980909.1| ferredoxin [Ralstonia pickettii 12D] gi|240864576|gb|ACS62237.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia pickettii 12D] Length = 276 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + + E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 86 IAVIDPERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCI 139 >gi|150399525|ref|YP_001323292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012228|gb|ABR54680.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 394 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELWLKINSEYA 74 N I P C+ CG+CE CPVDA+ K D + L K+ E+ Sbjct: 306 NLPYIDPIYCVRCGICENVCPVDAVDILKTDVSLDISLKQKVRDEFG 352 >gi|90022063|ref|YP_527890.1| putative ferredoxin [Saccharophagus degradans 2-40] gi|89951663|gb|ABD81678.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 484 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV+VCPVD +G F ECI+CG+C C Sbjct: 279 DCIDCSW--CVQVCPVDIDIRDGLQF------ECINCGLCVDAC 314 >gi|85857990|ref|YP_460192.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] gi|85721081|gb|ABC76024.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] Length = 265 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C CV+VCP Y E + I+ +CI C C CP D + + E Sbjct: 74 DGCMHCTDAACVKVCPSGALYHTEYGTVGINQAKCIGCKYCISACPFDVPRYNPE 128 >gi|45359187|ref|NP_988744.1| polyferredoxin [Methanococcus maripaludis S2] gi|45048062|emb|CAF31180.1| polyferredoxin [Methanococcus maripaludis S2] Length = 481 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 12/61 (19%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 VTENCILC +C+ CP D E F + E CI+CG+C +CP +A+ Sbjct: 225 VTENCILC--GNCISKCPKD-VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL 281 Query: 56 K 56 + Sbjct: 282 R 282 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 V C+LC+ C++ CP D E F +I +ECI CG C CP DAI Sbjct: 317 VDGGCVLCEL--CIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAI 367 >gi|37523338|ref|NP_926715.1| hypothetical protein gll3769 [Gloeobacter violaceus PCC 7421] gi|35214342|dbj|BAC91710.1| gll3769 [Gloeobacter violaceus PCC 7421] Length = 351 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ +CPVD G I C CG C P CP+ I+ Sbjct: 109 CLRICPVDAIAAG----GIEALRCYGCGRCAPVCPLGLIE 144 >gi|330446484|ref|ZP_08310136.1| electron transport complex, RnfABCDGE type, B subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490675|dbj|GAA04633.1| electron transport complex, RnfABCDGE type, B subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 194 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G ++ + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVSPCPTDCIE 160 >gi|325958129|ref|YP_004289595.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329561|gb|ADZ08623.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 412 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPD 58 + + V EN CI C CVE CP D + L++ P+ C CG+CE CPVDAI + Sbjct: 207 LKFEVDENTCIGCNL--CVEECPGDFIEPKPSTLSVTLPEVCTACGLCEKLCPVDAIDLE 264 Query: 59 TEPG 62 E G Sbjct: 265 VELG 268 >gi|331675602|ref|ZP_08376349.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA280] gi|331067210|gb|EGI38618.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA280] Length = 223 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|303245127|ref|ZP_07331443.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302484510|gb|EFL47458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 386 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 14/60 (23%) Query: 8 NCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDE-------CIDCGVCEPECPVDAI 55 +C+LC+ CV+VCP++ E PDE C+ CGVC PECPV+AI Sbjct: 90 HCVLCQK--CVDVCPIEIISIPGLVEKPKKQITIPDEPIVVMDNCVGCGVCVPECPVEAI 147 >gi|302389274|ref|YP_003825095.1| electron transport complex, RnfABCDGE type, B subunit [Thermosediminibacter oceani DSM 16646] gi|302199902|gb|ADL07472.1| electron transport complex, RnfABCDGE type, B subunit [Thermosediminibacter oceani DSM 16646] Length = 345 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 16 DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 DC +VCPV EN L I ++C CG+C ECP I Sbjct: 149 DCAKVCPVGAITMSENGLPVIDEEKCTGCGLCAKECPKQVI 189 >gi|301633034|ref|XP_002945583.1| PREDICTED: sorbose reductase homolog SOU2-like, partial [Xenopus (Silurana) tropicalis] Length = 457 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 15/27 (55%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPG 62 HP+ECI CG C CP A+K P Sbjct: 11 HPEECIACGHCVSVCPTGAVKHSLFPA 37 >gi|257467682|ref|ZP_05631778.1| putative [Fe] hydrogenase, electron-transfer subunit [Fusobacterium ulcerans ATCC 49185] gi|317061976|ref|ZP_07926461.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium ulcerans ATCC 49185] gi|313687652|gb|EFS24487.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium ulcerans ATCC 49185] Length = 594 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 +TY +T+ CI C T C VCP+D ++ I + CI CG C C AI Sbjct: 538 ITYSITDKCIGC--TACARVCPIDAITGTVKHRHEIDNEICIKCGACYETCKFGAI 591 >gi|297582883|ref|YP_003698663.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297141340|gb|ADH98097.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 286 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEPGL 63 + C+ C C VCPV Y+ +N + + D CI C C CP A D Sbjct: 131 IARPCMHCDKPPCASVCPVRATYKADNGIVVQDNDRCIGCRYCMVACPYGARSFDFGEEY 190 Query: 64 ELWLKIN 70 E L N Sbjct: 191 EEILDAN 197 >gi|158521014|ref|YP_001528884.1| adenylylsulfate reductase, beta subunit [Desulfococcus oleovorans Hxd3] gi|158509840|gb|ABW66807.1| adenylylsulfate reductase, beta subunit [Desulfococcus oleovorans Hxd3] Length = 144 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 14/114 (12%) Query: 2 TYVVTENCILCKHTD---CVEVCPVDCFYEGENFLAIH---PDECIDCGVCEPECPVDAI 55 ++V+ E C CK D C+ +CP D N + + PD+C +C C CP AI Sbjct: 3 SFVIAEKCDGCKGGDKTACMYICPNDLMVLDANAMKAYNQEPDQCWECFSCVKICPTQAI 62 Query: 56 K----PDTEP-GLELWLKINSE---YATQWPNITTKKESLPSAAKMDGVKQKYE 101 + D P G + + +E + ++ N T K+ P +G Y+ Sbjct: 63 EVRGYADFVPLGSSIMPMMGTEDVMWTCKFRNGTVKRFKFPIRTTDEGTANAYK 116 >gi|146283658|ref|YP_001173811.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri A1501] gi|145571863|gb|ABP80969.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri A1501] Length = 950 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + + +W I + Sbjct: 547 DKCIECGFCEPVCPSNGLTLTPRQRIVIWRDIQA 580 >gi|71906801|ref|YP_284388.1| electron transport complex protein RnfB [Dechloromonas aromatica RCB] gi|71846422|gb|AAZ45918.1| Electron transport complex, RnfABCDGE type, B subunit [Dechloromonas aromatica RCB] Length = 180 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ EN CI C T C++ CPVD L I +C C +C P CPV+ I T P Sbjct: 104 VIDENTCIGC--TLCIQACPVDAIVGAAKQLHIIIAQQCTGCELCLPPCPVECIAMATIP 161 >gi|15676051|ref|NP_273181.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis MC58] gi|59802180|ref|YP_208892.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|121634001|ref|YP_974246.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|194099902|ref|YP_002003039.1| 4Fe-4S ferrodoxin [Neisseria gonorrhoeae NCCP11945] gi|239997905|ref|ZP_04717829.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae 35/02] gi|240015115|ref|ZP_04722028.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae DGI18] gi|240017564|ref|ZP_04724104.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae FA6140] gi|240081707|ref|ZP_04726250.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae FA19] gi|240113983|ref|ZP_04728473.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae MS11] gi|240116719|ref|ZP_04730781.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID18] gi|240118941|ref|ZP_04733003.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID1] gi|240122186|ref|ZP_04735148.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID24-1] gi|240124479|ref|ZP_04737435.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID332] gi|240124653|ref|ZP_04737539.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae SK-92-679] gi|240129154|ref|ZP_04741815.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae SK-93-1035] gi|254494740|ref|ZP_05107911.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|254805831|ref|YP_003084052.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|260439522|ref|ZP_05793338.1| putative ferredoxin [Neisseria gonorrhoeae DGI2] gi|261400047|ref|ZP_05986172.1| ferredoxin [Neisseria lactamica ATCC 23970] gi|268593756|ref|ZP_06127923.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268597805|ref|ZP_06131972.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268600048|ref|ZP_06134215.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268602390|ref|ZP_06136557.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268604652|ref|ZP_06138819.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268683110|ref|ZP_06149972.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268683227|ref|ZP_06150089.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268687537|ref|ZP_06154399.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291042757|ref|ZP_06568498.1| ferredoxin [Neisseria gonorrhoeae DGI2] gi|293398224|ref|ZP_06642429.1| ferredoxin [Neisseria gonorrhoeae F62] gi|304388924|ref|ZP_07370971.1| ferredoxin [Neisseria meningitidis ATCC 13091] gi|313667418|ref|YP_004047702.1| ferredoxin [Neisseria lactamica ST-640] gi|7225340|gb|AAF40582.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58] gi|59719075|gb|AAW90480.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|120865707|emb|CAM09434.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|193935192|gb|ACF31016.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae NCCP11945] gi|226513780|gb|EEH63125.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|254669373|emb|CBA08496.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|254671137|emb|CBA08170.1| Ferredoxin [Neisseria meningitidis alpha153] gi|261391661|emb|CAX49109.1| putative ferredoxin [Neisseria meningitidis 8013] gi|268547145|gb|EEZ42563.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268551593|gb|EEZ46612.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268584179|gb|EEZ48855.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268586521|gb|EEZ51197.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268588783|gb|EEZ53459.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268623394|gb|EEZ55794.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268623511|gb|EEZ55911.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268627821|gb|EEZ60221.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|269210270|gb|EEZ76725.1| ferredoxin [Neisseria lactamica ATCC 23970] gi|291013191|gb|EFE05157.1| ferredoxin [Neisseria gonorrhoeae DGI2] gi|291611487|gb|EFF40557.1| ferredoxin [Neisseria gonorrhoeae F62] gi|304337058|gb|EFM03245.1| ferredoxin [Neisseria meningitidis ATCC 13091] gi|309378534|emb|CBX22806.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|313004880|emb|CBN86306.1| putative ferredoxin [Neisseria lactamica 020-06] gi|316985968|gb|EFV64907.1| ferredoxin [Neisseria meningitidis H44/76] gi|317165359|gb|ADV08900.1| putative ferredoxin [Neisseria gonorrhoeae TCDC-NG08107] gi|325133190|gb|EGC55861.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M6190] gi|325135232|gb|EGC57857.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M13399] gi|325138802|gb|EGC61354.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ES14902] gi|325141268|gb|EGC63767.1| iron-sulfur cluster-binding protein [Neisseria meningitidis CU385] gi|325145445|gb|EGC67721.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240013] gi|325197412|gb|ADY92868.1| iron-sulfur cluster-binding protein [Neisseria meningitidis G2136] gi|325199337|gb|ADY94792.1| iron-sulfur cluster-binding protein [Neisseria meningitidis H44/76] gi|325203042|gb|ADY98496.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240149] gi|325203243|gb|ADY98696.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240355] gi|325205216|gb|ADZ00669.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M04-240196] gi|325207160|gb|ADZ02612.1| iron-sulfur cluster-binding protein [Neisseria meningitidis NZ-05/33] Length = 83 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|150017381|ref|YP_001309635.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium beijerinckii NCIMB 8052] gi|149903846|gb|ABR34679.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium beijerinckii NCIMB 8052] Length = 282 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 4/92 (4%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 C C VD I D+CI CG C CP A+K + E G+ ++L ++ Sbjct: 171 CERTCKVDAISMVHKKAVIDYDKCISCGQCVKACPFKAMKLEKE-GIAVYL--GGKFGRN 227 Query: 77 WPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 I + E L +++ V + +Y+ N Sbjct: 228 L-RIGNRLERLYQPDELEAVTEMVIEYYKNNA 258 >gi|325972699|ref|YP_004248890.1| hydrogenase large subunit domain protein [Spirochaeta sp. Buddy] gi|324027937|gb|ADY14696.1| hydrogenase large subunit domain protein [Spirochaeta sp. Buddy] Length = 486 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 16/83 (19%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC---------------- 46 Y++++ C C C+ CP DC I CI CG C Sbjct: 113 YLISDACRGCFARPCLANCPKDCITFSGGQAHIDESRCIRCGKCKEVCPFHAVVHIPVPC 172 Query: 47 EPECPVDAIKPDTEPGLELWLKI 69 E CPV+A+K + E +E+ K+ Sbjct: 173 EEACPVNAVKKNAEGYVEIDYKL 195 >gi|261403278|ref|YP_003247502.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370271|gb|ACX73020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 137 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C C+ CP + N + + ++CI CG+C CP AI+ D + LK Sbjct: 33 CMHCDKNPCLYACPENAIERINNKVVVIEEKCIGCGLCALACPFGAIRIDG-----VALK 87 Query: 69 INSEYATQWPNITTKKESLPSAA 91 N Y ++ KE P+ A Sbjct: 88 CNGCYKR---DVEVCKEVCPTGA 107 >gi|152991176|ref|YP_001356898.1| molybdopterin oxidoreductase, iron sulfur subunit [Nitratiruptor sp. SB155-2] gi|151423037|dbj|BAF70541.1| molybdopterin oxidoreductase, iron sulfur subunit [Nitratiruptor sp. SB155-2] Length = 519 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVD 53 + ++ +C C C++ CP + + + EN + IH DE CI C C CP D Sbjct: 80 LQMFLSMSCNHCIDPACLKGCPTNSYIKIENGIVIHDDEACIGCQYCTWNCPYD 133 >gi|146281594|ref|YP_001171747.1| electron transport complex protein RnfC [Pseudomonas stutzeri A1501] gi|145569799|gb|ABP78905.1| electron transport complex protein rnfC [Pseudomonas stutzeri A1501] Length = 827 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI----------HPDECIDCGVCEPECP 51 CI C +C E CPV + +F A+ H +CI+CG C CP Sbjct: 371 CIRCG--ECAEACPVSLLPQQLHFFALGQEHEQLKAHHLFDCIECGACAYVCP 421 >gi|134046740|ref|YP_001098225.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132664365|gb|ABO36011.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 395 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 18/112 (16%) Query: 8 NCILCKHTDCVEVCPVDCFY--------EGENFLAIHP----DECIDCGVCEPECPVDAI 55 +C+LC+ CV++CP + + E + P EC+ CGVC PECPVDAI Sbjct: 90 HCVLCEK--CVDICPAEIISLPGKVEKPKKEVVIPQEPIAVTKECVACGVCVPECPVDAI 147 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 + ++ I +Q T ++ A K+ +QK K F+ N Sbjct: 148 SLEDIAVIDTDKCIYCTVCSQ----TCPWNAIFVAGKVPQKRQKTIKSFTVN 195 >gi|118472264|ref|YP_886216.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Mycobacterium smegmatis str. MC2 155] gi|118173551|gb|ABK74447.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium smegmatis str. MC2 155] Length = 304 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 122 MASDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 175 >gi|148652690|ref|YP_001279783.1| electron transport complex, RnfABCDGE type subunit B [Psychrobacter sp. PRwf-1] gi|148571774|gb|ABQ93833.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter sp. PRwf-1] Length = 275 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 20/100 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++CI C T C+ CPVD G++ I D C C +C CPVD I Sbjct: 113 DDCIGC--TKCIPACPVDAIIGTGKHMHTIFTDLCTGCELCLAPCPVDCID--------- 161 Query: 66 WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 +++ + A + P K+++ ++Q+Y + + Sbjct: 162 LVELPRDIALETPEYRAKEQA--------HLRQRYHTHLN 193 >gi|92114243|ref|YP_574171.1| electron transport complex, RnfABCDGE type, B subunit [Chromohalobacter salexigens DSM 3043] gi|91797333|gb|ABE59472.1| electron transport complex, RnfABCDGE type, B subunit [Chromohalobacter salexigens DSM 3043] Length = 335 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 76 VAFIREAECIGC--TKCIQACPVDAILGAAKQMHTVIAGECTGCELCVAPCPVDCI 129 >gi|83310776|ref|YP_421040.1| pyruvate with ferredoxin oxidoreductase and related 2-oxoacid with ferredoxin oxidoreductase [Magnetospirillum magneticum AMB-1] gi|82945617|dbj|BAE50481.1| Pyruvate with ferredoxin oxidoreductase and related 2-oxoacid with ferredoxin oxidoreductase [Magnetospirillum magneticum AMB-1] Length = 89 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C+ C C CPV C E + + D C CG+C ECP AIK Sbjct: 32 VDRDRCVKC--ATCWLYCPVQCVVEKAAWFDFNYDYCKGCGICAEECPHRAIK 82 >gi|238763933|ref|ZP_04624890.1| NADH-quinone oxidoreductase subunit I [Yersinia kristensenii ATCC 33638] gi|238784993|ref|ZP_04628991.1| NADH-quinone oxidoreductase subunit I [Yersinia bercovieri ATCC 43970] gi|238697901|gb|EEP90661.1| NADH-quinone oxidoreductase subunit I [Yersinia kristensenii ATCC 33638] gi|238714109|gb|EEQ06123.1| NADH-quinone oxidoreductase subunit I [Yersinia bercovieri ATCC 43970] Length = 180 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|297521336|ref|ZP_06939722.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli OP50] Length = 104 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|146303585|ref|YP_001190901.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701835|gb|ABP94977.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 489 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 9 CILCKHTDCVEVCPVD------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ DC + CPV F + + F A +CI G C CP D I Sbjct: 422 CLQCRTVDCAKACPVGLTDMRASFIKKQEFKAF---KCIGAGGCIEACPHDNI 471 >gi|238798411|ref|ZP_04641892.1| NADH-quinone oxidoreductase subunit I [Yersinia mollaretii ATCC 43969] gi|238717725|gb|EEQ09560.1| NADH-quinone oxidoreductase subunit I [Yersinia mollaretii ATCC 43969] Length = 180 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|309781131|ref|ZP_07675869.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia sp. 5_7_47FAA] gi|308920197|gb|EFP65856.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia sp. 5_7_47FAA] Length = 276 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 92 ERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCI 139 >gi|304398209|ref|ZP_07380083.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. aB] gi|308187597|ref|YP_003931728.1| NADH dehydrogenase I chain I [Pantoea vagans C9-1] gi|304354075|gb|EFM18448.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. aB] gi|308058107|gb|ADO10279.1| NADH dehydrogenase I chain I [Pantoea vagans C9-1] Length = 180 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|242239961|ref|YP_002988142.1| NADH dehydrogenase subunit I [Dickeya dadantii Ech703] gi|242132018|gb|ACS86320.1| NADH-quinone oxidoreductase, chain I [Dickeya dadantii Ech703] Length = 180 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|225075481|ref|ZP_03718680.1| hypothetical protein NEIFLAOT_00486 [Neisseria flavescens NRL30031/H210] gi|241760438|ref|ZP_04758532.1| ferredoxin [Neisseria flavescens SK114] gi|261364710|ref|ZP_05977593.1| ferredoxin [Neisseria mucosa ATCC 25996] gi|261380556|ref|ZP_05985129.1| hypothetical protein NEISUBOT_04575 [Neisseria subflava NJ9703] gi|224953200|gb|EEG34409.1| hypothetical protein NEIFLAOT_00486 [Neisseria flavescens NRL30031/H210] gi|241319107|gb|EER55600.1| ferredoxin [Neisseria flavescens SK114] gi|284796524|gb|EFC51871.1| ferredoxin [Neisseria subflava NJ9703] gi|288567006|gb|EFC88566.1| ferredoxin [Neisseria mucosa ATCC 25996] Length = 83 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|213645876|ref|ZP_03375929.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 180 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFELG 123 >gi|156937394|ref|YP_001435190.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566378|gb|ABU81783.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 505 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 5 VTENCILCKHTDCV---EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V EN C C VCP + E ++I PD+C CG+C CP+ ++ P Sbjct: 115 VPENTFACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCVAACPLYSLD---MP 171 Query: 62 GL 63 GL Sbjct: 172 GL 173 >gi|94264895|ref|ZP_01288669.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93454665|gb|EAT04933.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 226 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIH-PDECIDCGVCEPECPVDAI 55 C C + C CP ++ EN L +H P C+ C C CP DAI Sbjct: 52 QCNHCDNAPCTRACPTKAMHKVKENGLTLHEPRRCVGCRACMVSCPYDAI 101 >gi|82778087|ref|YP_404436.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella dysenteriae Sd197] gi|309786197|ref|ZP_07680825.1| formate hydrogenlyase subunit 6 [Shigella dysenteriae 1617] gi|81242235|gb|ABB62945.1| probable iron-sulfur protein of hydrogenase 3 [Shigella dysenteriae Sd197] gi|308925942|gb|EFP71421.1| formate hydrogenlyase subunit 6 [Shigella dysenteriae 1617] Length = 180 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELVWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|28898701|ref|NP_798306.1| nitrite reductase Fe-S protein NrfC [Vibrio parahaemolyticus RIMD 2210633] gi|153840172|ref|ZP_01992839.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ3810] gi|260363700|ref|ZP_05776484.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus K5030] gi|260879733|ref|ZP_05892088.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AN-5034] gi|260898793|ref|ZP_05907234.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus Peru-466] gi|260901606|ref|ZP_05910001.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ4037] gi|28806919|dbj|BAC60190.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio parahaemolyticus RIMD 2210633] gi|149746172|gb|EDM57292.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ3810] gi|308086597|gb|EFO36292.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus Peru-466] gi|308093420|gb|EFO43115.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AN-5034] gi|308108690|gb|EFO46230.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ4037] gi|308113400|gb|EFO50940.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus K5030] Length = 228 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y+ E+ + +H + C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDESTGIVDVHKERCVGCGYCLAACP 141 >gi|327482053|gb|AEA85363.1| D-lactate dehydrogenase, putative [Pseudomonas stutzeri DSM 4166] Length = 950 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + + +W I + Sbjct: 547 DKCIECGFCEPVCPSNGLTLTPRQRIVIWRDIQA 580 >gi|320102185|ref|YP_004177776.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Isosphaera pallida ATCC 43644] gi|319749467|gb|ADV61227.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Isosphaera pallida ATCC 43644] Length = 587 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 12/18 (66%), Positives = 15/18 (83%) Query: 35 IHPDECIDCGVCEPECPV 52 I P++CI CG+CE ECPV Sbjct: 504 IDPEKCIGCGICEHECPV 521 >gi|298675965|ref|YP_003727715.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288953|gb|ADI74919.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalobium evestigatum Z-7303] Length = 67 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Query: 17 CVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPVDAIK 56 C EVCPVD F G N + P++CI+C C CPVDA++ Sbjct: 16 CYEVCPVDLFDVGNNEEKEIEVAVVARPEDCIECEQCIEVCPVDAVR 62 >gi|194289439|ref|YP_002005346.1| benzoyl-CoA oxygenase component a [Cupriavidus taiwanensis LMG 19424] gi|193223274|emb|CAQ69279.1| Benzoyl-CoA oxygenase component A [Cupriavidus taiwanensis LMG 19424] Length = 414 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRC--NTCEDTCPIDAITHDDRNYVVRADVCNGCNACLSPCPTGAI 61 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHD 35 >gi|157370673|ref|YP_001478662.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia proteamaculans 568] gi|157322437|gb|ABV41534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Serratia proteamaculans 568] Length = 204 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ ++ + ++ CI C +C CP AI L + Sbjct: 51 CHQCEDAPCAQVCPVNAIRHQDDAIVLNESLCISCKLCGIACPFGAIGFGGSTPLAIPAD 110 Query: 69 INSEYATQWP 78 N+ A P Sbjct: 111 CNTSLALPAP 120 >gi|114773249|ref|ZP_01450484.1| oxidoreductase, FAD-binding protein [alpha proteobacterium HTCC2255] gi|114546368|gb|EAU49277.1| oxidoreductase, FAD-binding protein [alpha proteobacterium HTCC2255] Length = 943 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 D+CI+CG CEP CP + + +W +I Sbjct: 539 DKCIECGFCEPVCPSKELTFTPRQRIAIWRRI 570 >gi|83593599|ref|YP_427351.1| ferredoxin [Rhodospirillum rubrum ATCC 11170] gi|34148034|gb|AAQ62579.1| FixX [Rhodospirillum rubrum] gi|83576513|gb|ABC23064.1| ferredoxin [Rhodospirillum rubrum ATCC 11170] Length = 96 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query: 18 VEVCPVDCFYEGENF-LAIHPDECIDCGVCEPEC 50 V++CP C+ EGEN + + PD C++CG C C Sbjct: 41 VDICPAGCYVEGENGKVEVVPDGCMECGTCRIVC 74 >gi|332758139|gb|EGJ88464.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2747-71] Length = 205 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y + +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLAISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|332289328|ref|YP_004420180.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] gi|330432224|gb|AEC17283.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] Length = 241 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ ++ + I + C+ C C CP DA Sbjct: 96 LCNHCDNPPCVPVCPVQATYQQKDGIVVIDNERCVGCAYCVQACPYDA 143 >gi|332162382|ref|YP_004298959.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606461|emb|CBY27959.1| NADH-ubiquinone oxidoreductase chain I [Yersinia enterocolitica subsp. palearctica Y11] gi|325666612|gb|ADZ43256.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 180 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|260892256|ref|YP_003238353.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] gi|260864397|gb|ACX51503.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] Length = 995 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV VCP + + +AI P C CG C ECP AI+ Sbjct: 927 CVAC--LTCVRVCPYGAPRYTPEKGVVAIEPLACQGCGTCVGECPNAAIE 974 >gi|240102122|ref|YP_002958430.1| formate hydrogenlyase II subunit B (Mhy2B) [Thermococcus gammatolerans EJ3] gi|239909675|gb|ACS32566.1| formate hydrogenlyase II subunit B (Mhy2B) [Thermococcus gammatolerans EJ3] Length = 166 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 NC C+ CVEVCP + Y E+ + + P +CI C +C CP Sbjct: 47 NCRHCEKAPCVEVCPTNALYRDEDGAVLLAPQKCIGCLMCGIVCP 91 >gi|227824895|ref|ZP_03989727.1| ferredoxin [Acidaminococcus sp. D21] gi|226905394|gb|EEH91312.1| ferredoxin [Acidaminococcus sp. D21] Length = 429 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL-WLKINSEYAT 75 CV+ C V + I D CIDCG C CP AI EP EL K+N AT Sbjct: 22 CVKKCLVQAIRVRDGKAVIISDRCIDCGECIRCCPTRAIAALVEPLEELKSYKVNIALAT 81 >gi|225154915|ref|ZP_03723412.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224804274|gb|EEG22500.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 70 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDT 59 YV+ C C +C CP D ++ + I + C CG C CP +AI+ P T Sbjct: 7 YVIDRGCKFC--FNCKWTCPADAIVVVDDLMQIDQERCRHCGRCYDNCPNEAIRIIPPAT 64 Query: 60 EPG 62 +P Sbjct: 65 QPA 67 >gi|254481239|ref|ZP_05094484.1| electron transport complex, RnfABCDGE type, B subunit subfamily [marine gamma proteobacterium HTCC2148] gi|214038402|gb|EEB79064.1| electron transport complex, RnfABCDGE type, B subunit subfamily [marine gamma proteobacterium HTCC2148] Length = 203 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ + CI C T C++ CPVD + + EC C +C CPVD I + Sbjct: 113 VAYIREDECIGC--TKCIQACPVDAILGAAKHMHTVIVSECTGCDLCVEPCPVDCIDMIS 170 Query: 60 EP-GLELW 66 E L+ W Sbjct: 171 EKESLQTW 178 >gi|253698808|ref|YP_003019997.1| NADH dehydrogenase subunit I [Geobacter sp. M21] gi|251773658|gb|ACT16239.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M21] Length = 176 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 12/61 (19%) Query: 6 TENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC EGEN + I+ CI CG+C CP AI Sbjct: 54 AERCVACYL--CSGACPVDCISMAAAEGENGRRYAAWFRINFSRCILCGMCAEACPTLAI 111 Query: 56 K 56 + Sbjct: 112 Q 112 >gi|10945077|emb|CAC14151.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium meliloti] Length = 210 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 89 KCVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 144 >gi|45359250|ref|NP_988807.1| 2-oxoglutarate ferredoxin oxidoreductase subunit delta [Methanococcus maripaludis S2] gi|134046745|ref|YP_001098230.1| 2-oxoglutarate ferredoxin oxidoreductase subunit delta [Methanococcus maripaludis C5] gi|159905369|ref|YP_001549031.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|45048125|emb|CAF31243.1| 2-oxoglutarate ferredoxin oxidoreductase, delta (ferredoxin) subunit [Methanococcus maripaludis S2] gi|132664370|gb|ABO36016.1| 2-oxoglutarate ferredoxin oxidoreductase, delta subunit [Methanococcus maripaludis C5] gi|159886862|gb|ABX01799.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 68 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%) Query: 1 MTYVVTENCILCKHTD-CVEVCPVDCFYEGENFLA--------IHPDECIDCGVCEPECP 51 M ++ EN CK D C+EVCP D + + E ++P EC +C +C +CP Sbjct: 1 MKIIIDEN--YCKGCDICIEVCPKDVYKKSETLNKKGIYPPNPVNPKECTNCQLCILQCP 58 Query: 52 VDAIKPDTE 60 AI +TE Sbjct: 59 DQAITVETE 67 >gi|86148458|ref|ZP_01066748.1| Fe-S-cluster-containing hydrogenase component 1 [Vibrio sp. MED222] gi|85833755|gb|EAQ51923.1| Fe-S-cluster-containing hydrogenase component 1 [Vibrio sp. MED222] Length = 228 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 Y T N C C + CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 92 YRFTRNSCQHCDNAPCVMVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLLACP 143 >gi|315179710|gb|ADT86624.1| tetrathionate reductase, subunit B [Vibrio furnissii NCTC 11218] Length = 255 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|294102249|ref|YP_003554107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] gi|293617229|gb|ADE57383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] Length = 220 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E CI CK C+ VCP + F E E + IH D C C C CPV + E Sbjct: 64 ERCIGCKL--CIRVCPANAIEFLEEEKKIQIHVDRCCFCAQCTEICPVKCLSMSKE 117 >gi|289192303|ref|YP_003458244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938753|gb|ADC69508.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 391 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E CI C CVEVCP + + EN + I P C C +C CPV+A Sbjct: 202 VNAEKCIYC--LKCVEVCPGNMIKVDKENMIVIPPKSCPACKLCVNTCPVNA-------- 251 Query: 63 LELWLKINSEY 73 LEL +K++S + Sbjct: 252 LELEVKLSSPH 262 >gi|288575184|ref|ZP_06393540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568466|gb|EFC90024.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 288 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C CPV I D CI CG C CP AI D + + Sbjct: 151 EKCVGCGR--CFRNCPVKAISMTGGKAVIDKDVCIGCGECLTVCPASAISLDWRTDVVQF 208 Query: 67 LKINSEYA 74 + +EYA Sbjct: 209 HRRMAEYA 216 >gi|218884559|ref|YP_002428941.1| putative ATPase RIL [Desulfurococcus kamchatkensis 1221n] gi|218766175|gb|ACL11574.1| putative ATPase RIL [Desulfurococcus kamchatkensis 1221n] Length = 602 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 12/61 (19%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C L +C+ CPV+ ++ I+ + CI CG+C +CP +A Sbjct: 11 YCKPDKCSL----ECIRFCPVNRGKRKKAIELSSDGKYVIIYEETCIGCGICVKKCPFNA 66 Query: 55 I 55 I Sbjct: 67 I 67 >gi|126459791|ref|YP_001056069.1| thiamine pyrophosphate binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249512|gb|ABO08603.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Pyrobaculum calidifontis JCM 11548] Length = 593 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIK--PDTEPGLELW 66 I P C+ CGVC CPV AIK D LE+W Sbjct: 557 IDPALCVGCGVCAEVCPVGAIKGEGDRAKWLEVW 590 >gi|114762113|ref|ZP_01441581.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114545137|gb|EAU48140.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 249 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CV VCP Y+ + + + + CI CG+C CP A + D G+ Sbjct: 80 KSCLHCDDAPCVTVCPTGASYKRVEDGIVLVEEEACIGCGLCAWACPYGARELDLAAGV 138 >gi|108803761|ref|YP_643698.1| 2-oxoacid:acceptor oxidoreductase subunit delta, pyruvate/2-ketoisovalerate [Rubrobacter xylanophilus DSM 9941] gi|108765004|gb|ABG03886.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Rubrobacter xylanophilus DSM 9941] Length = 403 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVD 53 + CI C+ C CP +CF E +HP + C CG+C CPV+ Sbjct: 291 DTCIKCRQ--CWIDCPDECFEVTEE--GLHPINYEYCTGCGICSQVCPVE 336 >gi|328953517|ref|YP_004370851.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328453841|gb|AEB09670.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 99 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 17 CVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C +CP CF + L + PD CI CG CE CP AI P + Sbjct: 41 CAALCPKHCFTRDDTGGPLVVDPDSCIGCGWCEIHCPDFAISVHPRPTI 89 >gi|325267342|ref|ZP_08134004.1| ferredoxin [Kingella denitrificans ATCC 33394] gi|324981279|gb|EGC16929.1| ferredoxin [Kingella denitrificans ATCC 33394] Length = 83 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|319639534|ref|ZP_07994281.1| ferredoxin [Neisseria mucosa C102] gi|317399105|gb|EFV79779.1| ferredoxin [Neisseria mucosa C102] Length = 83 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|307131807|ref|YP_003883823.1| NADH:ubiquinone oxidoreductase subunit I [Dickeya dadantii 3937] gi|306529336|gb|ADM99266.1| NADH:ubiquinone oxidoreductase, chain I [Dickeya dadantii 3937] Length = 180 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDC-------FYEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|303256134|ref|ZP_07342151.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302861104|gb|EFL84178.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 192 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C CV+ CP Y EN L + P++C+ C C CP DA + GL + Sbjct: 67 CQHCSDAPCVKTCPFGANYYDENGLVRNDPNKCVGCNYCVASCPYDARWSHPDNGLPM 124 >gi|296109071|ref|YP_003616020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295433885|gb|ADG13056.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 392 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VVT+NC+ CK C+ CPV+ F E N + I ++CI C +C CP +AI Sbjct: 135 VVTDNCVGCKI--CIPECPVNAITFNEETNKVEIDKNKCIYCSICAQTCPWNAI 186 >gi|238920560|ref|YP_002934075.1| NADH dehydrogenase subunit I [Edwardsiella ictaluri 93-146] gi|269139723|ref|YP_003296424.1| formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Edwardsiella tarda EIB202] gi|294637172|ref|ZP_06715480.1| NADH-quinone oxidoreductase subunit I [Edwardsiella tarda ATCC 23685] gi|259514773|sp|C5B8H9|NUOI_EDWI9 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|238870129|gb|ACR69840.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] gi|267985384|gb|ACY85213.1| formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Edwardsiella tarda EIB202] gi|291089636|gb|EFE22197.1| NADH-quinone oxidoreductase subunit I [Edwardsiella tarda ATCC 23685] gi|304559590|gb|ADM42254.1| NADH-ubiquinone oxidoreductase chain I [Edwardsiella tarda FL6-60] Length = 180 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 14/69 (20%) Query: 6 TENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C E E+ F I+ CI CG+CE CP A+ Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAL 114 Query: 56 K--PDTEPG 62 + PD E G Sbjct: 115 QLTPDFEMG 123 >gi|257387968|ref|YP_003177741.1| NADH-quinone oxidoreductase, chain I [Halomicrobium mukohataei DSM 12286] gi|257170275|gb|ACV48034.1| NADH-quinone oxidoreductase, chain I [Halomicrobium mukohataei DSM 12286] Length = 153 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCP-------VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CPVDAI Sbjct: 45 ERCIWCRQ--CENVCPNNTIQIVTDDQRNGEQY-NLHIGQCIYCRLCEEVCPVDAI 97 >gi|170769899|ref|ZP_02904352.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia albertii TW07627] gi|170121193|gb|EDS90124.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia albertii TW07627] Length = 223 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 147 >gi|167948048|ref|ZP_02535122.1| polysulfide reductase, subunit B, putative [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 177 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 LC H D C+ VCP Y+ +N + + D C+ C C CP DA + T +E Sbjct: 26 LCNHCDNPPCMSVCPTGATYKMDNGIVMVDEDLCMGCRACAMACPYDARRAVTYDDVEKG 85 Query: 67 LKINSE-YATQWPNI 80 E Y + P++ Sbjct: 86 KAFYGEAYRRERPSV 100 >gi|167772719|ref|ZP_02444772.1| hypothetical protein ANACOL_04101 [Anaerotruncus colihominis DSM 17241] gi|167665197|gb|EDS09327.1| hypothetical protein ANACOL_04101 [Anaerotruncus colihominis DSM 17241] Length = 415 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 D C+ CG+C CPV AI PD Sbjct: 343 DRCVSCGLCARRCPVGAIPPD 363 >gi|91772370|ref|YP_565062.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanococcoides burtonii DSM 6242] gi|91711385|gb|ABE51312.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanococcoides burtonii DSM 6242] Length = 128 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 E C+ C C+ VCPV F +++ L + D+CI CG C CP +A+ Sbjct: 77 EECVECGA--CISVCPVGVFSFADDWSLEVDTDKCIQCGTCLTMCPHNAL 124 >gi|220930863|ref|YP_002507771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] gi|219992173|gb|ACL68776.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] Length = 94 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 26/54 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C++ C CP F+ N + I + CI+CG C CP + I PG Sbjct: 33 CLDCENKPCTYYCPARVFFWEVNEIKILFERCIECGACPWGCPRENIDWVYPPG 86 >gi|182420185|ref|ZP_02951416.1| iron-sulfur cluster-binding protein [Clostridium butyricum 5521] gi|237667529|ref|ZP_04527513.1| iron-sulfur cluster-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375987|gb|EDT73577.1| iron-sulfur cluster-binding protein [Clostridium butyricum 5521] gi|237655877|gb|EEP53433.1| iron-sulfur cluster-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 421 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV T CI C C +CP++ + + + C+ CGVC CP DAIK Sbjct: 288 YVDTHKCIGC--GKCTNICPMEAIGVTTIGKDKYAKVDDKLCLGCGVCVKNCPKDAIK 343 >gi|153872014|ref|ZP_02001030.1| Thiosulfate reductase subunit B [Beggiatoa sp. PS] gi|152071520|gb|EDN68970.1| Thiosulfate reductase subunit B [Beggiatoa sp. PS] Length = 247 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA--IKPDT 59 C+H D C+E CP Y+ E+ + + D C C +C P CP DA + P+T Sbjct: 60 CQHCDDAPCIEACPSGAAYKREDGMVLQDDAICSGCELCVPACPYDARWLNPET 113 >gi|187927967|ref|YP_001898454.1| ferredoxin [Ralstonia pickettii 12J] gi|187724857|gb|ACD26022.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia pickettii 12J] Length = 276 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + + E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 86 IAVIDPERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCI 139 >gi|91772648|ref|YP_565340.1| nitrite and sulphite reductase [Methanococcoides burtonii DSM 6242] gi|91711663|gb|ABE51590.1| coenzyme F420-dependent sulfite reductase [Methanococcoides burtonii DSM 6242] Length = 639 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V TE C C C E+C ++ I D CI+CG C CP +A D + G Sbjct: 514 VDTEKCTGCGR--CSELCKLNAISVISGKAVIDRDLCINCGWCVRGCPHEAAVED-QKGY 570 Query: 64 ELWLKIN-SEYATQWPNITT--KKESLPSAAKMDGVKQKYEKY 103 +W+ N T + T KE +PS +D V + + KY Sbjct: 571 SVWIGGNDGRRPTNGVLLKTFCTKEEIPSL--VDKVGKTFVKY 611 >gi|110642843|ref|YP_670573.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 536] gi|191171357|ref|ZP_03032906.1| formate hydrogenlyase, subunit F [Escherichia coli F11] gi|300941096|ref|ZP_07155608.1| hydrogenase 4 subunit H [Escherichia coli MS 21-1] gi|300975044|ref|ZP_07172845.1| hydrogenase 4 subunit H [Escherichia coli MS 200-1] gi|312965022|ref|ZP_07779262.1| formate hydrogenlyase subunit 6 [Escherichia coli 2362-75] gi|331648438|ref|ZP_08349526.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli M605] gi|110344435|gb|ABG70672.1| formate hydrogenase-3 component F [Escherichia coli 536] gi|190908291|gb|EDV67881.1| formate hydrogenlyase, subunit F [Escherichia coli F11] gi|281179723|dbj|BAI56053.1| formate hydrogenlyase subunit [Escherichia coli SE15] gi|300308812|gb|EFJ63332.1| hydrogenase 4 subunit H [Escherichia coli MS 200-1] gi|300454139|gb|EFK17632.1| hydrogenase 4 subunit H [Escherichia coli MS 21-1] gi|312290578|gb|EFR18458.1| formate hydrogenlyase subunit 6 [Escherichia coli 2362-75] gi|324005682|gb|EGB74901.1| hydrogenase 4 subunit H [Escherichia coli MS 57-2] gi|324013675|gb|EGB82894.1| hydrogenase 4 subunit H [Escherichia coli MS 60-1] gi|331042185|gb|EGI14327.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli M605] Length = 180 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWQFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|332799818|ref|YP_004461317.1| RnfABCDGE type electron transport complex subunit B [Tepidanaerobacter sp. Re1] gi|332697553|gb|AEE92010.1| electron transport complex, RnfABCDGE type, B subunit [Tepidanaerobacter sp. Re1] Length = 345 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E CI C T C + CPV+ E + + D CI CG+C+ +C DAIK Sbjct: 273 AVIIEEKCIGC--TLCAKNCPVNAISGEVKKVHKVDQDICIGCGICQEKCRKDAIK 326 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI CK C +VCP D + N AI ++C +C +C +CP I Sbjct: 214 VCSIGCIACKQ--CEKVCPFDAIHVNNNVAAIDYEKCRNCMLCVEKCPTGTI 263 >gi|310778118|ref|YP_003966451.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309747441|gb|ADO82103.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 55 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + E CI C C CPV + I D C+DCG C CPVDAI Sbjct: 1 MYVIDKEACIACGA--CEGTCPVSAISAADGKYEIS-DACVDCGACAGACPVDAIAA 54 >gi|282162750|ref|YP_003355135.1| hypothetical protein MCP_0080 [Methanocella paludicola SANAE] gi|282155064|dbj|BAI60152.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 461 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDA 54 + + + C++C+ EVCPV G N + D C CG C+ CPV+ Sbjct: 397 IAWAQNKKCLICE-----EVCPVKAIKSTGRNRPVVSEDVCAGCGSCQLNCPVEG 446 >gi|218709918|ref|YP_002417539.1| hypothetical protein VS_1931 [Vibrio splendidus LGP32] gi|218322937|emb|CAV19114.1| Protein nrfC homolog precursor [Vibrio splendidus LGP32] Length = 228 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 Y T N C C + CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 92 YRFTRNSCQHCDNAPCVMVCPTGAAYKDEKTGIVDVHQEKCVGCGYCLLACP 143 >gi|121595761|ref|YP_987657.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|120607841|gb|ABM43581.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] Length = 699 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C LC CV CP + L C+ CG+CE CP +AI Sbjct: 568 DRCTLC--LSCVSACPAGALQDNPQAPQLRFTEQNCVQCGLCERTCPENAI 616 >gi|157963673|ref|YP_001503707.1| dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] gi|157848673|gb|ABV89172.1| Dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] Length = 205 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + +C C C CP ++ + + IH D CI C C CP DA + D Sbjct: 58 FAYYTSISCNHCNTPACTTACPTGAMHKRAEDGLVMIHDDICIGCSSCSQACPYDAPQLD 117 Query: 59 TEPG 62 G Sbjct: 118 EARG 121 >gi|154174684|ref|YP_001407618.1| electron transport protein HydN [Campylobacter curvus 525.92] gi|112802520|gb|EAT99864.1| electron transport protein HydN [Campylobacter curvus 525.92] Length = 189 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP +N + +H + CI C +C CP AI E Sbjct: 48 VMPVQCRQCDDGPCANVCPTGALRFDDNCIELHEEICIGCKMCTIACPYGAISSSAE 104 >gi|90578855|ref|ZP_01234665.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] gi|90439688|gb|EAS64869.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] Length = 215 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C H +C +VCP ++ E + ++ D CI C C CP + Sbjct: 67 FAYYLSISCNHCTHPECTKVCPSGAMHKREEDGLVVVNEDVCIGCKYCHMACPYGEPQYS 126 Query: 59 TEPG 62 E G Sbjct: 127 EEKG 130 >gi|59712159|ref|YP_204935.1| formate-dependent nitrite reductase, 4Fe4S subunit [Vibrio fischeri ES114] gi|59480260|gb|AAW86047.1| formate-dependent nitrite reductase, 4Fe4S subunit [Vibrio fischeri ES114] Length = 228 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENAPCVMVCPTGAAYKDETTGIVDVHNEKCVGCGYCLAACP 143 >gi|116754868|ref|YP_843986.1| methyl-viologen-reducing hydrogenase, delta subunit [Methanosaeta thermophila PT] gi|116666319|gb|ABK15346.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta thermophila PT] Length = 791 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +V + CI C+ CV+ CP + + C CG C CPVDAI+ Sbjct: 576 VAFVDRDKCIGCRL--CVDTCPSRAISVKDTAF-VDEARCKGCGTCAAACPVDAIE 628 >gi|330998930|ref|ZP_08322657.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329576144|gb|EGG57663.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 253 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECP 51 C C++ CV+VCP + + +H DE CI C +C+ CP Sbjct: 62 CNHCENPQCVKVCPTGAMFISPEGVVLHNDEVCIGCRLCQKACP 105 >gi|238755292|ref|ZP_04616636.1| Formate hydrogenlyase subunit 2 [Yersinia ruckeri ATCC 29473] gi|238706526|gb|EEP98899.1| Formate hydrogenlyase subunit 2 [Yersinia ruckeri ATCC 29473] Length = 198 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 31/71 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ N + ++ + C+ C +C CP AI +++ Sbjct: 57 CHQCEDAPCAQVCPVNAITHENNAIHLNENLCVSCKLCGIACPFGAITFSASTPVDIPRD 116 Query: 69 INSEYATQWPN 79 N+ A P Sbjct: 117 CNTSKALPAPR 127 >gi|167770142|ref|ZP_02442195.1| hypothetical protein ANACOL_01485 [Anaerotruncus colihominis DSM 17241] gi|167667464|gb|EDS11594.1| hypothetical protein ANACOL_01485 [Anaerotruncus colihominis DSM 17241] Length = 479 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V C C C CP + I ++C++CG C CP AI T P Sbjct: 95 YHVGSACRGCIAHRCEHACPTGAISVHDGKAHIDQEKCVECGRCATACPYSAIMKYTRP 153 >gi|153003957|ref|YP_001378282.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027530|gb|ABS25298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 100 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 14/108 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C CP +GE+ I P+ C +C C+ CPVD Sbjct: 1 MATKITDECINCGA--CEPECPNSAITQGEDIYVIDPNLCTECVGFHGEEACQAVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PD E G E + + AT P+ + P A++ ++ K Sbjct: 59 CIPDEEKG-ETEEVLYARLATIHPD-----KQFPPLAELTAELSRFRK 100 >gi|70734308|ref|YP_257948.1| FAD-binding oxidoreductase [Pseudomonas fluorescens Pf-5] gi|68348607|gb|AAY96213.1| oxidoreductase, FAD-binding [Pseudomonas fluorescens Pf-5] Length = 936 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + +W I + Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVIWRDIQA 571 >gi|218767189|ref|YP_002341701.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|121051197|emb|CAM07468.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|319411394|emb|CBY91805.1| putative ferredoxin [Neisseria meningitidis WUE 2594] gi|325129159|gb|EGC52007.1| iron-sulfur cluster-binding protein [Neisseria meningitidis N1568] Length = 83 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|89074812|ref|ZP_01161266.1| hydrogenase 4 Fe-S subunit [Photobacterium sp. SKA34] gi|89049387|gb|EAR54949.1| hydrogenase 4 Fe-S subunit [Photobacterium sp. SKA34] Length = 204 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++C+H + C EVCPV + + + ++ C+ C +C CP AI D Sbjct: 49 VMCRHCEDAPCAEVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFD 100 >gi|194437237|ref|ZP_03069335.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 101-1] gi|194423793|gb|EDX39782.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 101-1] Length = 223 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYHVRFIHPVTK 147 >gi|319794409|ref|YP_004156049.1| electron transport complex, rnfABCdge type, b subunit [Variovorax paradoxus EPS] gi|315596872|gb|ADU37938.1| electron transport complex, RnfABCDGE type, B subunit [Variovorax paradoxus EPS] Length = 211 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 13/102 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M + CI C T C++ CP D + + C C +C P CPVD I + Sbjct: 76 MAVIDEAWCIGC--TLCLDACPTDAIVGINKRMHTVVEAHCTGCELCIPVCPVDCISLEV 133 Query: 60 E----PGLELWLKINSEYATQWPNI------TTKKESLPSAA 91 E G + W + +E A Q + T K+E+ P+ A Sbjct: 134 ETPGRSGWQAWSEAQAEAALQRYKLHGQHRATAKREAEPAPA 175 >gi|260768009|ref|ZP_05876943.1| tetrathionate reductase subunit B [Vibrio furnissii CIP 102972] gi|260616039|gb|EEX41224.1| tetrathionate reductase subunit B [Vibrio furnissii CIP 102972] Length = 255 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|297568400|ref|YP_003689744.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924315|gb|ADH85125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 189 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+VCP Y+ E+ +AI CI C C CP DA Sbjct: 66 SQCQHCQNPPCVKVCPTSASYQTEDGLVAIDYKRCIVCASCILACPYDA 114 >gi|222099246|ref|YP_002533814.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] gi|221571636|gb|ACM22448.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] Length = 507 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAI 55 CI C CV VC Y EN ++ + +C+ C CE CP +AI Sbjct: 19 CIRC--LACVRVCSYGANYYDENANRVYTENYKCVGCHFCEAICPTEAI 65 >gi|254462867|ref|ZP_05076283.1| 4Fe-4S binding domain protein [Rhodobacterales bacterium HTCC2083] gi|206679456|gb|EDZ43943.1| 4Fe-4S binding domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 257 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++C+ C+ CV VCP Y+ + + ++ +CI CG+C CP A + D Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMDA 134 >gi|160942429|ref|ZP_02089736.1| hypothetical protein CLOBOL_07313 [Clostridium bolteae ATCC BAA-613] gi|158434681|gb|EDP12448.1| hypothetical protein CLOBOL_07313 [Clostridium bolteae ATCC BAA-613] Length = 568 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 16/65 (24%) Query: 9 CILCKHTDCVEVC-------PVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDA 54 CILC DCV +C +D Y G L I +C++CG C CP A Sbjct: 145 CILCG--DCVRMCDNVQSVNAIDFAYRGTEALVTPAFNKNIAETDCVNCGQCRAVCPTGA 202 Query: 55 IKPDT 59 I +T Sbjct: 203 ISINT 207 >gi|150401850|ref|YP_001325616.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014553|gb|ABR57004.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 61 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C + CP D F EG + + DEC C +CE CP DA+K Sbjct: 18 CKDACPTDVFGVEGSKIVVSNADECTFCMMCEDLCPADAVK 58 >gi|45357667|ref|NP_987224.1| polyferredoxin [Methanococcus maripaludis S2] gi|45047227|emb|CAF29660.1| polyferredoxin [Methanococcus maripaludis S2] Length = 205 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Query: 10 ILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 I+C+H C+ VCPVD +N ++ P++CI CGVC C + +K Sbjct: 69 IICEHCGACLNVCPVDAI--EKNRFSVDPEKCIKCGVCSIFCTIPILK 114 >gi|332880702|ref|ZP_08448375.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681336|gb|EGJ54260.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 480 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y VT C C C CP D Y+ E I ++CI CG C CP AI Sbjct: 113 INYEVTNLCRGCAARPCYNNCPKDAIHYDSEGKAYIDHEKCISCGRCHQVCPYHAI 168 >gi|327311122|ref|YP_004338019.1| Formate dehydrogenase subunit beta [Thermoproteus uzoniensis 768-20] gi|326947601|gb|AEA12707.1| Formate dehydrogenase, beta subunit [Thermoproteus uzoniensis 768-20] Length = 281 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C + C CP E + I+ D+CI CG CE CP D Sbjct: 94 QCMHCVNPPCARACPSGAISVTPEGAVVINKDQCIGCGFCENACPYD 140 >gi|323966867|gb|EGB62296.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327251443|gb|EGE63129.1| formate hydrogenlyase subunit 6 [Escherichia coli STEC_7v] Length = 180 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWQFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|312222247|emb|CBY02187.1| hypothetical protein [Leptosphaeria maculans] Length = 230 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 27/105 (25%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 N+EYAT TT++E L + K+ K+E Sbjct: 187 EGP----------NTEYAT-----TTREELLYNKEKLLSNGDKWE 216 >gi|303243584|ref|ZP_07329926.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302486145|gb|EFL49067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 154 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CILC +C+E CP + ++ + + I ++C+ CG C CPV+A+K Sbjct: 99 CILC--GECLE-CPYNAIFKNGHLIEIDNNKCMLCGDCIAICPVNALK 143 >gi|298373293|ref|ZP_06983282.1| Fe-hydrogenase large subunit family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274345|gb|EFI15897.1| Fe-hydrogenase large subunit family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 491 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + + +N A I D CI CG+C CP AI Sbjct: 112 INYEITNLCKGCVARGCYTNCPKNAVHFQKNGQAQIDHDACISCGICHQSCPYHAI 167 >gi|284049133|ref|YP_003399472.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidaminococcus fermentans DSM 20731] gi|283953354|gb|ADB48157.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidaminococcus fermentans DSM 20731] Length = 250 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +CV +CPV+ + GE + A+ D C+ C C CP AI Sbjct: 187 ECVRLCPVENIHLGEKY-AVMGDHCLHCLACLHGCPHQAI 225 >gi|222836452|gb|EEE74859.1| predicted protein [Populus trichocarpa] Length = 217 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV Y+ ++ + I CI C C CP DA Sbjct: 96 LCNHCDNPPCVPVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDA 143 >gi|167771050|ref|ZP_02443103.1| hypothetical protein ANACOL_02404 [Anaerotruncus colihominis DSM 17241] gi|167666720|gb|EDS10850.1| hypothetical protein ANACOL_02404 [Anaerotruncus colihominis DSM 17241] Length = 799 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 E C LCK T C + P+ G + LAI +C+ CG+C CP Sbjct: 749 EGCQLCK-TICTDFAPL---VTGPDQLAIDRTQCVACGMCYNRCP 789 >gi|157374544|ref|YP_001473144.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316918|gb|ABV36016.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 205 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + +C C H CV+ CP ++ + + I C+ C C CP DA + D Sbjct: 62 FAHYTSISCNHCSHPVCVKACPTGACHKRKSDGLVHIEASLCVGCQSCSRACPYDAPQFD 121 Query: 59 TEPGL 63 +E G+ Sbjct: 122 SERGV 126 >gi|90412117|ref|ZP_01220123.1| electron transport complex protein RnfB [Photobacterium profundum 3TCK] gi|90326841|gb|EAS43226.1| electron transport complex protein RnfB [Photobacterium profundum 3TCK] Length = 192 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G ++ + DEC C +C CP D I+ Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|329118705|ref|ZP_08247406.1| ferredoxin [Neisseria bacilliformis ATCC BAA-1200] gi|327465208|gb|EGF11492.1| ferredoxin [Neisseria bacilliformis ATCC BAA-1200] Length = 83 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|322433771|ref|YP_004215983.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidobacterium sp. MP5ACTX9] gi|321161498|gb|ADW67203.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidobacterium sp. MP5ACTX9] Length = 529 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 + ++ C C DC++ CPVD + + + + +H D CI C C CP + + E Sbjct: 99 HYLSMGCNHCLDADCLKGCPVDAYTKDPVSGIVLHSADACIGCSYCVWNCPYSVPQYNPE 158 Query: 61 PGL 63 G+ Sbjct: 159 RGV 161 >gi|289191701|ref|YP_003457642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938151|gb|ADC68906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 389 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E CI C CVEVCP + + EN + I P C C +C CPV+A Sbjct: 203 VNAEKCIYC--LKCVEVCPGNMIKVDKENMIVIPPKSCPACKLCVNTCPVNA-------- 252 Query: 63 LELWLKINSEY 73 LEL +K++S + Sbjct: 253 LELEVKLSSPH 263 >gi|322420257|ref|YP_004199480.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] gi|320126644|gb|ADW14204.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] Length = 616 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C T C VCPVDC E + I CI CG C C A+ Sbjct: 566 EKCVGC--TRCARVCPVDCISGEVKKPHLIDQRGCIRCGECLKACNFAAV 613 >gi|149194896|ref|ZP_01871990.1| ferredoxin [Caminibacter mediatlanticus TB-2] gi|149135055|gb|EDM23537.1| ferredoxin [Caminibacter mediatlanticus TB-2] Length = 84 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + E CI C CV+ CP G+ I PD C +C C CPVDA Sbjct: 1 MSLKINEECIACDA--CVDECPNGAIEPGDPIYEIDPDLCTECIEYGGEPQCVQVCPVDA 58 Query: 55 IKPD---TEPGLELWLK 68 I PD E EL LK Sbjct: 59 IVPDPDNVETAKELKLK 75 >gi|20092397|ref|NP_618472.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19917651|gb|AAM06952.1| ferredoxin [Methanosarcina acetivorans C2A] Length = 72 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Query: 16 DCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C +VCPV+ F EG+ + P++CI+C C CP DAI+ Sbjct: 23 ECYDVCPVELFDAEETEEGKRAVVARPEDCIECEQCVDACPTDAIE 68 >gi|238789980|ref|ZP_04633759.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] gi|238721928|gb|EEQ13589.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] Length = 205 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CV CP Y+ E + ++ D C+ C CE CP A + D Sbjct: 58 FNYYLSIACNHCSSPTCVTGCPTGAMYKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFD 117 Query: 59 TEPGL 63 + L Sbjct: 118 AKKKL 122 >gi|313673723|ref|YP_004051834.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940479|gb|ADR19671.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 501 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 19/66 (28%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD---CFYEGENFL-----------AIHPDECIDCGVC 46 + Y NC++C+ E CP ++E N L ++P+ CI CG+C Sbjct: 420 LPYAYNVNCMVCE-----EHCPTSPKAIYFEDHNILKDGREVIIKKPVVNPNLCIGCGIC 474 Query: 47 EPECPV 52 +CPV Sbjct: 475 TYKCPV 480 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Query: 17 CVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ +CP+ FY + F D C +CG+C C V A PGLE++ Sbjct: 212 CIYLCPLGAFYGLLSKHSLFKINRSDSCNNCGICNTHCTVSA-----NPGLEVF 260 >gi|218778375|ref|YP_002429693.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfatibacillum alkenivorans AK-01] gi|218759759|gb|ACL02225.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfatibacillum alkenivorans AK-01] Length = 774 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 V C +DC G C DCG+CE CP AI EPG + ++ E Sbjct: 703 VNTCAMDCSSCGT---------CRDCGICEAICPQAAITRVEEPGKRFEMVVDPE 748 >gi|160935395|ref|ZP_02082777.1| hypothetical protein CLOBOL_00290 [Clostridium bolteae ATCC BAA-613] gi|158441753|gb|EDP19453.1| hypothetical protein CLOBOL_00290 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y +T C C +C+ CP C + I + CI CG C CP A+ E G Sbjct: 173 YFITRQCRGC--GNCLSKCPQTCITTAQVPFEIQKEHCIRCGNCLEVCPFGAVVRREEDG 230 >gi|152979394|ref|YP_001345023.1| electron transport complex protein RnfB [Actinobacillus succinogenes 130Z] gi|150841117|gb|ABR75088.1| electron transport complex, RnfABCDGE type, B subunit [Actinobacillus succinogenes 130Z] Length = 189 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD- 58 + ++ + CI C T CV+ CPVD L + P+ C C +C CP D I + Sbjct: 103 VAFIHEDMCIGC--TKCVQACPVDAIIGTNKTLHTVIPELCTGCELCVAPCPTDCITMEK 160 Query: 59 TEPGLELW 66 EP +E W Sbjct: 161 VEPKIENW 168 >gi|126732222|ref|ZP_01748023.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126707304|gb|EBA06369.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 249 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP ++ + + ++ +CI CG+C CP A + D G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASFKRTEDGIVLVNESDCIGCGLCAWACPYGARELDAAEGV 138 >gi|146296552|ref|YP_001180323.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410128|gb|ABP67132.1| ech hydrogenase subunit F [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 127 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 26 FYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 F++G L I D+CI CG+C+ +CP +AI D + Sbjct: 28 FFKGTRGSLEIEIDKCIFCGICQRKCPANAITVDRNAKM 66 >gi|328474734|gb|EGF45539.1| nitrite reductase Fe-S protein NrfC [Vibrio parahaemolyticus 10329] Length = 228 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H + C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCLAACP 141 >gi|302344645|ref|YP_003809174.1| nitroreductase [Desulfarculus baarsii DSM 2075] gi|301641258|gb|ADK86580.1| nitroreductase [Desulfarculus baarsii DSM 2075] Length = 304 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTE 60 T + + CI C CV CP F + CI CG C CP A+ P Sbjct: 7 TVIDAQKCIGCGR--CVVTCPAQAFTLAAGKSVVSGQRCILCGHCLAVCPTGAVGVPAMG 64 Query: 61 PG 62 PG Sbjct: 65 PG 66 >gi|296123295|ref|YP_003631073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296015635|gb|ADG68874.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 594 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C+ CPV+ YE + F I D+C C C CP + K Sbjct: 136 VTAACHHCLEPACMTACPVNA-YEKDAFTGIVRHLDDQCFGCQYCTLACPYNVPKYHAAK 194 Query: 62 GL 63 G+ Sbjct: 195 GI 196 >gi|197117614|ref|YP_002138041.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197086974|gb|ACH38245.1| iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 432 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 31 NFL-AIHPDECIDCGVCEPECPVDAIKPDTEP---GLELWLKINSE 72 NF+ A P C CG C CPVDAI EP G+ ++NSE Sbjct: 282 NFIQATDPARCDGCGRCVAICPVDAISLVREPEGSGMPAKARLNSE 327 >gi|145298716|ref|YP_001141557.1| NADH dehydrogenase subunit I [Aeromonas salmonicida subsp. salmonicida A449] gi|156632701|sp|A4SLN7|NUOI_AERS4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|142851488|gb|ABO89809.1| NADH dehydrogenase I, I subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 180 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAERDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|89893643|ref|YP_517130.1| hypothetical protein DSY0897 [Desulfitobacterium hafniense Y51] gi|89333091|dbj|BAE82686.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 378 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 21/42 (50%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ CP D + N + +H + C CG+C +CP + Sbjct: 27 SHCLGHCPSDAIHSYNNHIYLHKESCSGCGLCLSDCPTGVFR 68 >gi|327479772|gb|AEA83082.1| electron transport complex protein RnfC [Pseudomonas stutzeri DSM 4166] Length = 827 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI----------HPDECIDCGVCEPECP 51 CI C +C E CPV + +F A+ H +CI+CG C CP Sbjct: 371 CIRCG--ECAEACPVSLLPQQLHFFALGQEHEQLKAHHLFDCIECGACAYVCP 421 >gi|315186755|gb|EFU20513.1| methyl-accepting chemotaxis sensory transducer [Spirochaeta thermophila DSM 6578] Length = 706 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C+ C C+ VCPV +G + + P+ CI CG C C A + D E LE Sbjct: 15 CVSCHR--CIAVCPVKYANDGSGEVVEVRPELCIGCGECLKACTHGARRVVDDLEEALE 71 >gi|322418560|ref|YP_004197783.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320124947|gb|ADW12507.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 97 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 17 CVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C EVCP F E + + D C++CG C CP A+K D G Sbjct: 26 CTEVCPHQVFRIEQKKAVLADRDACMECGACALNCPAAALKVDAGVG 72 >gi|291287233|ref|YP_003504049.1| hypothetical protein Dacet_1321 [Denitrovibrio acetiphilus DSM 12809] gi|290884393|gb|ADD68093.1| protein of unknown function DUF362 [Denitrovibrio acetiphilus DSM 12809] Length = 360 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 9/65 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ E CILC C++ CPVD +F + +CI+C C C DA+ GL Sbjct: 297 VLNEKCILC--MLCMKSCPVDAIAVINDFPFVDKKKCIECFCCHEVCESDAV------GL 348 Query: 64 EL-WL 67 E WL Sbjct: 349 ERSWL 353 >gi|168212642|ref|ZP_02638267.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens CPE str. F4969] gi|170715827|gb|EDT28009.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens CPE str. F4969] Length = 273 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 10/59 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPVDA 54 + +V+ +N CK+ +CPV F + ++ +I H D+CI CG C CP++ Sbjct: 189 LAFVLKDNRAFCKY-----ICPVTVFLKPMSYYSIIRVHCHEDKCIKCGKCLKVCPMNV 242 >gi|281357847|ref|ZP_06244333.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] gi|281315794|gb|EFA99821.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] Length = 614 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIK 56 + Y +++ C+ C C+ CPV+C GE + D+ CI CGVC C A++ Sbjct: 558 IRYEISDRCVGCGL--CLHRCPVNCI-SGERKMRHRIDQSRCIKCGVCFQTCKFHAVE 612 >gi|113867422|ref|YP_725911.1| benzoyl-CoA oxygenase component A [Ralstonia eutropha H16] gi|113526198|emb|CAJ92543.1| Benzoyl-CoA oxygenase component A [Ralstonia eutropha H16] Length = 416 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRC--NTCEDTCPIDAITHDDRNYVVRADVCNGCNACLSPCPTGAI 61 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHD 35 >gi|77456976|ref|YP_346481.1| FAD linked oxidase-like [Pseudomonas fluorescens Pf0-1] gi|77380979|gb|ABA72492.1| putative FAD-binding oxidoreductase [Pseudomonas fluorescens Pf0-1] Length = 940 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + +W I + Sbjct: 538 DKCIECGFCEPVCPSKGLTLSPRQRIVIWRDIQA 571 >gi|114045797|ref|YP_736347.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113887239|gb|ABI41290.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 182 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ +C+ C + C+ CP + + + ++ D+C CG+C CP DA+ Sbjct: 57 LSHSCMHCGNPACLIACPAQAYTVRSDGLVVLNRDKCTGCGLCVSACPYDAV 108 >gi|284165625|ref|YP_003403904.1| methyl-viologen-reducing hydrogenase subunit delta [Haloterrigena turkmenica DSM 5511] gi|284015280|gb|ADB61231.1| methyl-viologen-reducing hydrogenase delta subunit [Haloterrigena turkmenica DSM 5511] Length = 712 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 16 DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 +CVE CP D + +A H + C +CG C CP A + Sbjct: 315 ECVEACPHDAVERSRIDEVAFHEEACQNCGACTSACPTGATR 356 >gi|182413557|ref|YP_001818623.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Opitutus terrae PB90-1] gi|177840771|gb|ACB75023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Opitutus terrae PB90-1] Length = 551 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTEP 61 +T C C C+ CPV YE + I D+CI C C +CP DA K + Sbjct: 107 ITTACHHCADPACLNGCPV-LAYEKDPLTGIVRHLDDQCIGCQYCILKCPYDAPKYNARL 165 Query: 62 GL 63 G+ Sbjct: 166 GI 167 >gi|166032145|ref|ZP_02234974.1| hypothetical protein DORFOR_01848 [Dorea formicigenerans ATCC 27755] gi|166027868|gb|EDR46625.1| hypothetical protein DORFOR_01848 [Dorea formicigenerans ATCC 27755] Length = 249 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 DECI CG+CE +CP AI + + G +W+K Sbjct: 181 DECIGCGLCERKCPAKAI--EIQDGKPVWIK 209 >gi|78776861|ref|YP_393176.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] gi|78497401|gb|ABB43941.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] Length = 84 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M ++ + CI C C E CP EG+ I PD C +C GV C CPVD Sbjct: 1 MALIINDECIACDA--CREECPTIAIEEGDPIYFIDPDRCTECVGVYDEPACISVCPVDC 58 Query: 55 IKPD---TEPGLELWLK 68 I PD E EL K Sbjct: 59 IIPDKDNVESIAELQFK 75 >gi|91793219|ref|YP_562870.1| electron transport complex protein RnfB [Shewanella denitrificans OS217] gi|91715221|gb|ABE55147.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella denitrificans OS217] Length = 205 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP-D 58 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGAGKLMHTVIAADCTGCDLCVEPCPVDCIDMLP 163 Query: 59 TEPGLELW-LKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 E L+ W K+N+ T + ++ +A G KQ Sbjct: 164 VETNLKNWDWKLNAIAVTVIDPVPLMTQAQDNADNTQGDKQ 204 >gi|300853894|ref|YP_003778878.1| putative 4Fe-4S ferredoxin [Clostridium ljungdahlii DSM 13528] gi|300434009|gb|ADK13776.1| putative 4Fe-4S ferredoxin [Clostridium ljungdahlii DSM 13528] Length = 184 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ C C+ C+ CPV+ E + + I+ CI C C CPV A+ Sbjct: 59 VMPVQCRHCEDAPCLNACPVNAIVEKDGSIIINESACIGCQTCTIVCPVGAV 110 >gi|152995572|ref|YP_001340407.1| electron transport complex protein RnfB [Marinomonas sp. MWYL1] gi|150836496|gb|ABR70472.1| electron transport complex, RnfABCDGE type, B subunit [Marinomonas sp. MWYL1] Length = 198 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + + + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 VAVIREDECIGC--TKCIQACPVDAILGAAKQMHTVIADECTGCDLCVEPCPVDCIDM-V 163 Query: 60 EPGLEL----WLKINSEYATQWPNITTKKES 86 E G+ W K AT I T +++ Sbjct: 164 EVGVTAKTWSWDKPQGIAATSLNIIATDRQA 194 >gi|91228909|ref|ZP_01262809.1| electron transport complex protein RnfB [Vibrio alginolyticus 12G01] gi|269968667|ref|ZP_06182663.1| electron transport complex protein RnfB [Vibrio alginolyticus 40B] gi|91187540|gb|EAS73872.1| electron transport complex protein RnfB [Vibrio alginolyticus 12G01] gi|269826721|gb|EEZ81059.1| electron transport complex protein RnfB [Vibrio alginolyticus 40B] Length = 198 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|90021997|ref|YP_527824.1| aspartate carbamoyltransferase [Saccharophagus degradans 2-40] gi|89951597|gb|ABD81612.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 615 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C+ C++ CP + + + A+ PD C CG C CP +A + D G Sbjct: 109 ISMACNHCEEPVCLKGCPTRAYTKHPEYGAVIQDPDICFGCGYCTWVCPYNAPQLDPVAG 168 >gi|71083537|ref|YP_266256.1| adenylyl-sulfate reductase chain B [Candidatus Pelagibacter ubique HTCC1062] gi|71062650|gb|AAZ21653.1| adenylyl-sulfate reductase chain B [Candidatus Pelagibacter ubique HTCC1062] Length = 156 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 T+V C C H CV++CP D + EN + I P+ C +C C CP AI Sbjct: 3 TFVYMTRCDGCGH--CVDICPSDIMHIDENIRRAVNIEPNFCWECYSCVKACPNHAI 57 >gi|330892471|gb|EGH25132.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. mori str. 301020] Length = 179 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|310779014|ref|YP_003967347.1| putative PAS/PAC sensor protein [Ilyobacter polytropus DSM 2926] gi|309748337|gb|ADO82999.1| putative PAS/PAC sensor protein [Ilyobacter polytropus DSM 2926] Length = 570 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 19/118 (16%) Query: 12 CKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD---TEPGLEL 65 CKH CV C V + I D+CI CG C CP +A I D + + Sbjct: 11 CKHCYKCVRKCEVKAIKIENDQAHIMEDKCIACGQCFAICPQNARNIMSDLDFVKNAISS 70 Query: 66 WLKINSEYATQWPNITTKKESLPSAAK-------------MDGVKQKYEKYFSPNPGG 110 +N A + + + SA K D V Q YEKY S G Sbjct: 71 GRNVNISIAPSFRGFFEESQRFVSAIKKLGFNQVEETAVGADMVSQAYEKYLSSQENG 128 >gi|308050185|ref|YP_003913751.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307632375|gb|ADN76677.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 213 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y + C C H CV+ CP ++ + ++I CI C C CP DA + + Sbjct: 64 FSYYTSVGCNHCSHPVCVKACPTGACHKSRSTGLVSIDRGVCIGCASCARACPYDAPQLN 123 Query: 59 TEPGLEL 65 G + Sbjct: 124 QATGTMM 130 >gi|300716527|ref|YP_003741330.1| Electron transport complex protein [Erwinia billingiae Eb661] gi|299062363|emb|CAX59480.1| Electron transport complex protein [Erwinia billingiae Eb661] Length = 191 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 108 VAWIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 162 >gi|261211946|ref|ZP_05926232.1| electron transport complex protein RnfB [Vibrio sp. RC341] gi|260838554|gb|EEX65205.1| electron transport complex protein RnfB [Vibrio sp. RC341] Length = 195 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + +EC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKNECTGCDLCVAPCPTDCIE 160 >gi|157736568|ref|YP_001489251.1| NADH-quinone oxidoreductase, I subunit [Arcobacter butzleri RM4018] gi|315635731|ref|ZP_07890994.1| NADH-quinone oxidoreductase subunit I [Arcobacter butzleri JV22] gi|157698422|gb|ABV66582.1| NADH-quinone oxidoreductase, I subunit [Arcobacter butzleri RM4018] gi|315480028|gb|EFU70698.1| NADH-quinone oxidoreductase subunit I [Arcobacter butzleri JV22] Length = 166 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 22/104 (21%) Query: 6 TENCILCKHTDCVEVCPVDC-FYEGENFLAIHPD-----------ECIDCGVCEPECPVD 53 +E C+ C C CP +C F E E H + EC+ CG C CP D Sbjct: 73 SEKCVACFM--CATACPAECIFIEAEERFDEHNEKRPKEFKIDLLECVFCGYCVEACPCD 130 Query: 54 AIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 AI+ DT I S A++ + K++L + + +K Sbjct: 131 AIRMDT--------GIFSFTASKREDFVLDKKALMANERSKDLK 166 >gi|20093521|ref|NP_613368.1| pyruvate:ferredoxin oxidoreductase, delta subunit [Methanopyrus kandleri AV19] gi|19886359|gb|AAM01298.1| Pyruvate:ferredoxin oxidoreductase, delta subunit [Methanopyrus kandleri AV19] Length = 89 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C+ C C CP C ++ I D C CG+CE CPV+AI+ E G Sbjct: 36 EKCMNCGL--CFMYCPDGCIRPSDDGYVIDYDYCKGCGICESVCPVNAIEMVLEEG 89 >gi|324017281|gb|EGB86500.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] Length = 143 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPG 108 >gi|291532617|emb|CBL05730.1| Uncharacterized Fe-S center protein [Megamonas hypermegale ART12/1] Length = 375 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V T+ C+ C C +C + I PD+C+ CG C C DAIKP Sbjct: 193 VDTDKCVGC--GACSRICAHGAPIITDRKCYIDPDKCLGCGRCIGACHFDAIKPTNWNAE 250 Query: 64 ELWLKINSEYA 74 +L + +EYA Sbjct: 251 DLLNRRMAEYA 261 >gi|192361907|ref|YP_001983090.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] gi|190688072|gb|ACE85750.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] Length = 470 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +CI C CV+VCPVD +G ECIDCG+C C K E GL Sbjct: 270 DCIDCSW--CVQVCPVDIDIRDGLQ------AECIDCGLCVDACNSVMDKMGYERGL 318 >gi|154496907|ref|ZP_02035603.1| hypothetical protein BACCAP_01200 [Bacteroides capillosus ATCC 29799] gi|150273865|gb|EDN00978.1| hypothetical protein BACCAP_01200 [Bacteroides capillosus ATCC 29799] Length = 507 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +VTE C C C EVCP D Y G + I D+CI CG C C AI Sbjct: 116 MVTEGCQGCLAHPCEEVCPKDAIKLDRYNGRSH--IDQDKCIKCGRCADVCSYKAIIIQE 173 Query: 60 EP 61 P Sbjct: 174 RP 175 >gi|150401707|ref|YP_001325473.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014410|gb|ABR56861.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 173 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Query: 10 ILCKH---TDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 I+C+H C EVCPVD Y + + + ++CI CG+C CP AI Sbjct: 42 IVCQHCASAPCKEVCPVDAIYHLDDGTVYLDEEKCIGCGLCPMACPFGAI 91 >gi|29653641|ref|NP_819333.1| ferredoxin [Coxiella burnetii RSA 493] gi|153208644|ref|ZP_01946896.1| ferredoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154706402|ref|YP_001425124.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161830643|ref|YP_001596239.1| ferredoxin [Coxiella burnetii RSA 331] gi|165919779|ref|ZP_02219522.1| ferredoxin [Coxiella burnetii RSA 334] gi|212213202|ref|YP_002304138.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212218124|ref|YP_002304911.1| ferredoxin [Coxiella burnetii CbuK_Q154] gi|29540903|gb|AAO89847.1| ferredoxin [Coxiella burnetii RSA 493] gi|120575830|gb|EAX32454.1| ferredoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154355688|gb|ABS77150.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161762510|gb|ABX78152.1| ferredoxin [Coxiella burnetii RSA 331] gi|165916862|gb|EDR35466.1| ferredoxin [Coxiella burnetii RSA 334] gi|212011612|gb|ACJ18993.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212012386|gb|ACJ19766.1| ferredoxin [Coxiella burnetii CbuK_Q154] Length = 81 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 +ECI+C VCEPECP DAI EL +INS T+ Sbjct: 7 EECINCDVCEPECPNDAISMG-----ELIYEINSNRCTE 40 >gi|33519937|ref|NP_878769.1| NADH dehydrogenase subunit I [Candidatus Blochmannia floridanus] gi|81666916|sp|Q7VRV9|NUOI_BLOFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|33504283|emb|CAD83175.1| NADH dehydrogenase I chain I [Candidatus Blochmannia floridanus] Length = 181 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C + EN F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVSCPVGCISLKKSENSEGRWYPEFFRINFSRCIFCGMCEEACPTAAIQ 116 >gi|114566201|ref|YP_753355.1| NADH dehydrogenase (quinone) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337136|gb|ABI67984.1| NADH dehydrogenase (quinone) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 590 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Query: 17 CVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 CV CP DC GEN I + C CG C CP Sbjct: 543 CVYACPADCIKGGENNQPYYIEQENCSKCGACLDICP 579 Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I PD C+ CG+C CP D IK Sbjct: 532 IDPDRCMGCGLCVYACPADCIK 553 >gi|332799825|ref|YP_004461324.1| hydrogenase, Fe-only [Tepidanaerobacter sp. Re1] gi|332697560|gb|AEE92017.1| hydrogenase, Fe-only [Tepidanaerobacter sp. Re1] Length = 584 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 36/134 (26%) Query: 6 TENCILCKH--TDCVEVCPVDCF---YEGENF-------LAIHPDECIDCGVCEPECPVD 53 T CILC+ + C +V V Y G N +++ C++CG C CPV Sbjct: 145 TSKCILCRRCVSTCHKVQGVGVISPNYRGFNTVIAPVYDMSLSEVSCVNCGQCIMACPVG 204 Query: 54 AIKP--------------------DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 A+K T P + + L E+ + I TKK LP+A + Sbjct: 205 ALKEKDDTDKVWKALADPEKYVIVQTAPAIRVSL--GEEFGGELGTIVTKK--LPAALRR 260 Query: 94 DGVKQKYEKYFSPN 107 G + ++ FS + Sbjct: 261 LGFDKVFDTDFSAD 274 >gi|319949417|ref|ZP_08023479.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Dietzia cinnamea P4] gi|319436914|gb|EFV91972.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Dietzia cinnamea P4] Length = 321 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++ C C H CV+VCP E + + D C CG C CP I+ + P Sbjct: 134 SDVCKHCTHAACVDVCPTGALMHTEFGTVVVQSDICNGCGYCVSACPYGVIERRSGP 190 >gi|315186947|gb|EFU20705.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Spirochaeta thermophila DSM 6578] Length = 595 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 18/26 (69%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I PD+CI CGVC CPV+AI + + Sbjct: 542 ILPDKCIGCGVCARRCPVNAISGERK 567 >gi|313205384|ref|YP_004044041.1| 4fe-4S ferredoxin iroN-sulfur binding domain protein [Paludibacter propionicigenes WB4] gi|312444700|gb|ADQ81056.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paludibacter propionicigenes WB4] Length = 321 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + + C C + CV VCPVD F + + I + CI C C CP A Sbjct: 139 AYYMPKPCQHCDNPPCVAVCPVDATFKRQDGIVLIDNERCIGCRFCIAACPYSA 192 >gi|296132872|ref|YP_003640119.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031450|gb|ADG82218.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 54 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C++ CP EG+ + D C DCG C CP AI Sbjct: 1 MAYKITDECVACGT--CLDTCPNGAIEEGDIYKI--TDACADCGACAEACPTGAI 51 >gi|77919712|ref|YP_357527.1| indolepyruvate oxidoreductase subunit alpha [Pelobacter carbinolicus DSM 2380] gi|77545795|gb|ABA89357.1| indolepyruvate oxidoreductase, alpha subunit [Pelobacter carbinolicus DSM 2380] Length = 613 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C C++ CP + E + I D C+ CGVCE CP AI E Sbjct: 556 VGAECNGCRYCIKAFECPALVYDEPSGRVCIDNDLCVGCGVCERVCPRGAIHNQGE 611 >gi|113971988|ref|YP_735781.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886672|gb|ABI40724.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 182 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ +C+ C + C+ CP + + + ++ D+C CG+C CP DA+ Sbjct: 57 LSHSCMHCGNPACLIACPAQAYTVRSDGLVVLNRDKCTGCGLCVSACPYDAV 108 >gi|219666551|ref|YP_002456986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219536811|gb|ACL18550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 174 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 + Y ++ +C C++ +CV VCP + + ++ + +H P C CG C CP K Sbjct: 46 LHYFLSLSCNHCENPECVRVCPEGTYRKRKDGIVLHDPWRCSGCGKCTHACPFHVPKYSL 105 Query: 60 EPG 62 G Sbjct: 106 SSG 108 >gi|310659325|ref|YP_003937046.1| cobyrinic acid a,c-diamide synthase [Clostridium sticklandii DSM 519] gi|308826103|emb|CBH22141.1| Cobyrinic acid a,c-diamide synthase [Clostridium sticklandii] Length = 295 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E CI C C+E C D E E+ ++P C C +CE CPV+AI + + EL Sbjct: 66 SEKCINCGL--CMEKCRFDAI-ENESDYKVNPFACEGCSLCEYVCPVNAIIMNKDVAGEL 122 Query: 66 WL 67 L Sbjct: 123 ML 124 >gi|300723256|ref|YP_003712556.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus nematophila ATCC 19061] gi|297629773|emb|CBJ90381.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus nematophila ATCC 19061] Length = 207 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIIGANRAMHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|293609051|ref|ZP_06691354.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829624|gb|EFF87986.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 87 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCD--VCEPVCPNEAIFMGEVIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|262402645|ref|ZP_06079206.1| electron transport complex protein RnfB [Vibrio sp. RC586] gi|262351427|gb|EEZ00560.1| electron transport complex protein RnfB [Vibrio sp. RC586] Length = 195 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + +EC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKNECTGCDLCVAPCPTDCIE 160 >gi|54309722|ref|YP_130742.1| electron transport complex protein RnfB [Photobacterium profundum SS9] gi|46914160|emb|CAG20940.1| Putative RnfB-related protein [Photobacterium profundum SS9] Length = 192 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G ++ + DEC C +C CP D I+ Sbjct: 105 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|37679887|ref|NP_934496.1| ferredoxin [Vibrio vulnificus YJ016] gi|37198632|dbj|BAC94467.1| ferredoxin [Vibrio vulnificus YJ016] Length = 557 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 T C LC CV VCP + +GE+ L +C+ CG+C CP Sbjct: 421 TTGCTLC--MSCVAVCPTRALHTDGESPSLQFVEQDCVQCGLCTKACP 466 >gi|323700004|ref|ZP_08111916.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio sp. ND132] gi|323459936|gb|EGB15801.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio desulfuricans ND132] Length = 249 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDA 54 C+ C++ CV CP Y+ + DE CI CG C P CP DA Sbjct: 62 CMHCENPTCVTACPTGATYKDPETGVVVIDETLCIGCGNCIPACPYDA 109 >gi|307719056|ref|YP_003874588.1| hypothetical protein STHERM_c13750 [Spirochaeta thermophila DSM 6192] gi|306532781|gb|ADN02315.1| hypothetical protein STHERM_c13750 [Spirochaeta thermophila DSM 6192] Length = 595 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 14/21 (66%), Positives = 16/21 (76%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I PD+CI CGVC CPV+AI Sbjct: 542 ILPDKCIGCGVCARRCPVNAI 562 >gi|229591260|ref|YP_002873379.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens SBW25] gi|312961693|ref|ZP_07776191.1| NADH-quinone oxidoreductase, chain I [Pseudomonas fluorescens WH6] gi|229363126|emb|CAY50146.1| NADH Dehydrogenase I chain I [Pseudomonas fluorescens SBW25] gi|311283952|gb|EFQ62535.1| NADH-quinone oxidoreductase, chain I [Pseudomonas fluorescens WH6] Length = 182 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|226330215|ref|ZP_03805733.1| hypothetical protein PROPEN_04128 [Proteus penneri ATCC 35198] gi|225201010|gb|EEG83364.1| hypothetical protein PROPEN_04128 [Proteus penneri ATCC 35198] Length = 208 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +NCI C T C++ CPVD + + D C C +C P CP D I Sbjct: 115 DNCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVPPCPTDCI 162 >gi|218885987|ref|YP_002435308.1| nitrite and sulphite reductase 4Fe-4S region [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756941|gb|ACL07840.1| nitrite and sulphite reductase 4Fe-4S region [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 267 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 9/94 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +E C C C +CP E+ +HP+ C+ CG+C CP A+ P G Sbjct: 98 ASEACTRCGL--CERLCPDHAMTVEEDGPRLHPENCLSCGLCIKRCPEKAL-PVAREG-- 152 Query: 65 LWLKINSEYATQWPNITTKKESL---PSAAKMDG 95 W + + P + T+ + L P A+ G Sbjct: 153 -WRVVVGGRLGRRPRLATELDGLDEVPGASGFPG 185 >gi|254172099|ref|ZP_04878775.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] gi|214033995|gb|EEB74821.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] Length = 174 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 Y V NC C+ C+EVCP ++ E+ + + D+CI C +C CP Sbjct: 30 AYNVPMNCRHCEKAPCMEVCPTGAIFKDEDGAVLVDVDKCIGCKMCAIVCP 80 >gi|150399563|ref|YP_001323330.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012266|gb|ABR54718.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 166 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C EVCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCSEVCPVSAIESKDGVIYLDKETCIGCGLCAMACPFGAI 90 >gi|89893636|ref|YP_517123.1| hypothetical protein DSY0890 [Desulfitobacterium hafniense Y51] gi|89333084|dbj|BAE82679.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 379 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + + C H C+ CP D + N + ++ D C CG+C +CP + Sbjct: 19 VLHHGVECNH--CIGHCPADAIHYDNNHIYLNKDSCNGCGLCLSDCPTEVF 67 >gi|283778897|ref|YP_003369652.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283437350|gb|ADB15792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 718 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 17/58 (29%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD------ECIDCGVCEPECPVDAIK 56 V +CI C CV++CP D AI PD +C C C CP +AIK Sbjct: 386 VESSCIHC--NKCVQICPFD---------AIKPDFTTRTTDCTLCQTCAGVCPTEAIK 432 >gi|163751853|ref|ZP_02159068.1| NADH dehydrogenase subunit I [Shewanella benthica KT99] gi|161328269|gb|EDP99431.1| NADH dehydrogenase subunit I [Shewanella benthica KT99] Length = 171 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 16/67 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF-----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC +E + F I+ CI CG CE CP AI Sbjct: 49 ERCVACNL--CSVACPVDCISVEKTEKPDGRWEAKTF-TINFSRCIMCGFCEEACPTHAI 105 Query: 56 K--PDTE 60 + PD E Sbjct: 106 QLTPDFE 112 >gi|28870536|ref|NP_793155.1| NADH dehydrogenase I subunit I [Pseudomonas syringae pv. tomato str. DC3000] gi|213970028|ref|ZP_03398160.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato T1] gi|301381383|ref|ZP_07229801.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato Max13] gi|302062154|ref|ZP_07253695.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato K40] gi|302130464|ref|ZP_07256454.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato NCPPB 1108] gi|81730550|sp|Q87ZQ2|NUOI_PSESM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|28853784|gb|AAO56850.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213925132|gb|EEB58695.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato T1] gi|330875766|gb|EGH09915.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965585|gb|EGH65845.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017278|gb|EGH97334.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 182 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|66046433|ref|YP_236274.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae B728a] gi|81308095|sp|Q4ZRI6|NUOI_PSEU2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|63257140|gb|AAY38236.1| NADH-quinone oxidoreductase, chain I [Pseudomonas syringae pv. syringae B728a] gi|330972914|gb|EGH72980.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aceris str. M302273PT] Length = 182 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|77459832|ref|YP_349339.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf0-1] gi|110287767|sp|Q3KA56|NUOI_PSEPF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|77383835|gb|ABA75348.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf0-1] Length = 182 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|37679436|ref|NP_934045.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio vulnificus YJ016] gi|37198180|dbj|BAC94016.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio vulnificus YJ016] Length = 265 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 134 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACP 180 >gi|237800535|ref|ZP_04588996.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023395|gb|EGI03452.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. oryzae str. 1_6] Length = 182 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|197285542|ref|YP_002151414.1| tetrathionate reductase subunit B [Proteus mirabilis HI4320] gi|227356037|ref|ZP_03840428.1| tetrathionate reductase subunit B [Proteus mirabilis ATCC 29906] gi|194683029|emb|CAR43509.1| tetrathionate reductase subunit B [Proteus mirabilis HI4320] gi|227163814|gb|EEI48722.1| tetrathionate reductase subunit B [Proteus mirabilis ATCC 29906] Length = 246 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + I + C+ C C CP DA Sbjct: 99 LCNHCDEPPCVPVCPVQATFQRKDGIVVIDNERCVGCAYCVQACPYDA 146 >gi|168188071|ref|ZP_02622706.1| anaerobic sulfite reductase subunit C [Clostridium botulinum C str. Eklund] gi|169294091|gb|EDS76224.1| anaerobic sulfite reductase subunit C [Clostridium botulinum C str. Eklund] Length = 304 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C C +E C + Y+ E+ + I ++CI+CG C C +A++ + E G++++ Sbjct: 170 DKCRNCGKCGVIEKCRMKAAYKEEDKVVIDREKCINCGKCIENCYFNAMETN-EEGMKIY 228 Query: 67 L 67 L Sbjct: 229 L 229 >gi|158320134|ref|YP_001512641.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140333|gb|ABW18645.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 364 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 22/40 (55%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C+E CP + + I + CI CG+C+ +CP +I Sbjct: 35 NCIESCPTAAIVKRDQAFVIEDELCIGCGICKVKCPSQSI 74 >gi|89900968|ref|YP_523439.1| putative glutamate synthase (NADPH) small subunit [Rhodoferax ferrireducens T118] gi|89345705|gb|ABD69908.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Rhodoferax ferrireducens T118] Length = 541 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIK 56 NC C +C VCP + + G+ F + D C CG+C ECP AIK Sbjct: 487 NCFECD--NCYGVCPDNAVIKHGPGKGF-DFNYDYCKGCGICVSECPCGAIK 535 >gi|330810470|ref|YP_004354932.1| NADH-quinone oxidoreductase subunit I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|75527983|sp|Q8RQ74|NUOI_PSEFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|19483810|gb|AAL89571.1| NADH dehydrogenase I subunit I [Pseudomonas fluorescens] gi|327378578|gb|AEA69928.1| NADH-quinone oxidoreductase subunit I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 182 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|27365883|ref|NP_761411.1| Iron-sulfur cluster-binding protein [Vibrio vulnificus CMCP6] gi|27362032|gb|AAO10938.1| Iron-sulfur cluster-binding protein [Vibrio vulnificus CMCP6] Length = 552 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 T C LC CV VCP + +GE+ L +C+ CG+C CP Sbjct: 416 TTGCTLC--MSCVAVCPTRALHTDGESPSLQFVEQDCVQCGLCTKACP 461 >gi|328474564|gb|EGF45369.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 10329] Length = 198 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|297624163|ref|YP_003705597.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165343|gb|ADI15054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Truepera radiovictrix DSM 17093] Length = 332 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI+C C VCP F G L + P+ C C C CPV I Sbjct: 243 VHDGCIMCPV--CTNVCPTGAFKRELSPVQMGGGGVLKLEPERCNGCNACVTSCPVRVIT 300 Query: 57 PDTE 60 D E Sbjct: 301 LDGE 304 >gi|149184627|ref|ZP_01862945.1| NADH dehydrogenase subunit I [Erythrobacter sp. SD-21] gi|148831947|gb|EDL50380.1| NADH dehydrogenase subunit I [Erythrobacter sp. SD-21] Length = 161 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDA+ Sbjct: 60 ERCIACKL--CEAVCPAQAITIESEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAVV 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EYAT+ T++E L AK+ K+E+ + N Sbjct: 118 EGP----------NFEYATE-----TREELLYDKAKLLANGDKWERAIAAN 153 >gi|71733335|ref|YP_275286.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485447|ref|ZP_05639488.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625433|ref|ZP_06458387.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649284|ref|ZP_06480627.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. 2250] gi|289679207|ref|ZP_06500097.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae FF5] gi|298487555|ref|ZP_07005597.1| NADH-ubiquinone oxidoreductase chain I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302185030|ref|ZP_07261703.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae 642] gi|110287765|sp|Q48H47|NUOI_PSE14 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71553888|gb|AAZ33099.1| NADH-quinone oxidoreductase, I subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157939|gb|EFH99017.1| NADH-ubiquinone oxidoreductase chain I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323795|gb|EFW79879.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. B076] gi|320327934|gb|EFW83939.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. race 4] gi|330866831|gb|EGH01540.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881176|gb|EGH15325.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. race 4] gi|330900634|gb|EGH32053.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. japonica str. M301072PT] gi|330954556|gb|EGH54816.1| NADH dehydrogenase subunit I [Pseudomonas syringae Cit 7] gi|330981363|gb|EGH79466.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330987949|gb|EGH86052.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010720|gb|EGH90776.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 182 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|320156338|ref|YP_004188717.1| iron-sulfur cluster-binding protein [Vibrio vulnificus MO6-24/O] gi|319931650|gb|ADV86514.1| iron-sulfur cluster-binding protein [Vibrio vulnificus MO6-24/O] Length = 552 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 T C LC CV VCP + +GE+ L +C+ CG+C CP Sbjct: 416 TTGCTLC--MSCVAVCPTRALHTDGESPSLQFVEQDCVQCGLCTKACP 461 >gi|296163947|ref|ZP_06846582.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900702|gb|EFG80073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 95 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 8/59 (13%) Query: 3 YVVTENCILCKHTDCVEVCP--VDCFYE-GENFLA---IHPDECIDCGVCEPECPVDAI 55 + + + CI C C CP VD + ++FL I DECIDCG C P CPVD I Sbjct: 9 FYIDDTCIGCGA--CEHSCPGRVDAISKKADDFLGRFVIDLDECIDCGKCVPLCPVDCI 65 >gi|284162822|ref|YP_003401445.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284012819|gb|ADB58772.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 249 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C+H CV+VC Y+ E+ + + CI C C CP +A + EP E Sbjct: 105 CQECEHPGCVQVCLTQASYKREDGIVVVDLHRCIGCRYCMIACPYNARRFLFEPPEEHLT 164 Query: 68 KINSEYATQWPNITTK 83 +N E + + K Sbjct: 165 VVNPEAPMRKHGVVMK 180 >gi|170765779|ref|ZP_02900590.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] gi|170124925|gb|EDS93856.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] Length = 247 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+Y+ +C CK C+ CP D +Y+G+ +I +C CG CE CP AI P Sbjct: 1 MSYIDQTSCTGCKV--CLLFCPDDAIEYYDGK--CSIDSKQCTLCGCCEGCCPFSAIHPT 56 Query: 59 T 59 T Sbjct: 57 T 57 >gi|262393721|ref|YP_003285575.1| electron transport complex protein RnfB [Vibrio sp. Ex25] gi|262337315|gb|ACY51110.1| electron transport complex protein RnfB [Vibrio sp. Ex25] Length = 198 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|85859306|ref|YP_461508.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85722397|gb|ABC77340.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 346 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK 56 ++ E C C CVEVCP G++ L + E CI C C CP A+K Sbjct: 194 LMPEKCTKCG--TCVEVCPTGAAQFGDDGLPFYDHEVCIGCAQCIGFCPALALK 245 >gi|45359027|ref|NP_988584.1| hypothetical protein MMP1464 [Methanococcus maripaludis S2] gi|45047902|emb|CAF31020.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 161 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C++C C + CP + E ++ ++ + D+C+ CG CE CP AIK Sbjct: 114 CVMC--LVCTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIK 159 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 8/53 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIK 56 E CILC C+EVCPV NF + PD +C+ C C CPVDAIK Sbjct: 36 EICILCNR--CLEVCPVTAI--SSNFPEV-PDIDNKCVYCNTCVETCPVDAIK 83 >gi|257388652|ref|YP_003178425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] gi|257170959|gb|ACV48718.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] Length = 109 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 11/70 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--------EGE-NFLAIHPDECIDCGVCEPECPV 52 T+V + I C+E CPVD F E E H D+CIDC +C CPV Sbjct: 37 THVAVDFDICIADGACLEDCPVDVFEWVDTPDHPESEIKADPAHEDQCIDCMLCVDVCPV 96 Query: 53 DAIKPDTEPG 62 DAI D +PG Sbjct: 97 DAI--DVDPG 104 >gi|156975002|ref|YP_001445909.1| hypothetical protein VIBHAR_02724 [Vibrio harveyi ATCC BAA-1116] gi|156526596|gb|ABU71682.1| hypothetical protein VIBHAR_02724 [Vibrio harveyi ATCC BAA-1116] Length = 165 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 32 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACP 78 >gi|161527803|ref|YP_001581629.1| ATPase RIL [Nitrosopumilus maritimus SCM1] gi|160339104|gb|ABX12191.1| ABC transporter related [Nitrosopumilus maritimus SCM1] Length = 595 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Query: 16 DCVEVCPV-----DCFYEGENFLAIHPDE--CIDCGVCEPECPVDAI 55 +C++ CPV DC E DE C CG+C CP DAI Sbjct: 21 ECIKYCPVNKSGADCIVLNEESKKAQIDEDICNGCGICVKVCPFDAI 67 >gi|9651774|gb|AAF91266.1|AF230199_8 pyruvate oxidoreductase cysteine-rich subunit 1 [Methanococcus maripaludis] Length = 167 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 10 ILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C+H + C++VCPV + + + + CI CG+C CP AI Sbjct: 42 VVCQHCTSSPCMDVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAI 90 >gi|331002204|ref|ZP_08325723.1| hypothetical protein HMPREF0491_00585 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411298|gb|EGG90714.1| hypothetical protein HMPREF0491_00585 [Lachnospiraceae oral taxon 107 str. F0167] Length = 393 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+ VV E +C C T CV+ CP D EN A+ C CG C CP DAI D Sbjct: 1 MSVVVIEKDCRGC--TKCVKSCPFDAITM-ENKKAVIGIACTSCGTCIEVCPFDAIVKD 56 >gi|325959022|ref|YP_004290488.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330454|gb|ADZ09516.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 460 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT---EPG 62 + C C+ C+ CPVD ++ E+ D+C+ C +C CP +AI T EP Sbjct: 27 SSKCEACEDKPCLMSCPVDAIWKTEDGKIEIDDKCVGCVLCREACPYNAINMKTTLSEPI 86 Query: 63 LELWLKINSEYATQ 76 E IN++ Q Sbjct: 87 RENVPNINTKLCRQ 100 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CV CP + ++ + + ++CI CG C+ CPV+AIK TE Sbjct: 407 CVRKCPTNALKLEKDEVIVDTEKCILCGECDIICPVNAIKLKTE 450 >gi|291544150|emb|CBL17259.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus sp. 18P13] Length = 475 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 10 ILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 I C+ C C + + EN AI D+CI CG C +CP AI Sbjct: 144 INCRRRPCENACKIKALHMNENKAAAIDNDKCISCGACVYQCPFGAI 190 >gi|291460676|ref|ZP_06600066.1| electron transport complex, RnfABCDGE type, B subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291416635|gb|EFE90354.1| electron transport complex, RnfABCDGE type, B subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 296 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CP D + +N LA+ ++C DCG+C +CP AI Sbjct: 221 GCIACGL--CEKNCPFDAIHVTDN-LAVMNEKCTDCGICAQKCPTGAI 265 >gi|257055934|ref|YP_003133766.1| formate dehydrogenase beta subunit [Saccharomonospora viridis DSM 43017] gi|256585806|gb|ACU96939.1| formate dehydrogenase beta subunit [Saccharomonospora viridis DSM 43017] Length = 337 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 + ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 156 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSACPYGVI 208 >gi|218884674|ref|YP_002429056.1| DNA-directed RNA polymerase subunit D [Desulfurococcus kamchatkensis 1221n] gi|218766290|gb|ACL11689.1| DNA-directed RNA polymerase subunit D [Desulfurococcus kamchatkensis 1221n] Length = 280 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIK 56 +E C + + CV CP + F G N + + D EC C +CE CP A+K Sbjct: 178 SEKCKGAECSRCVNACPKNIFEAGNNSVRVKEDKILECTFCRLCENICPTQAVK 231 >gi|134045160|ref|YP_001096646.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662785|gb|ABO34431.1| membrane-bound hydrogenase subunit ehaQ [Methanococcus maripaludis C5] Length = 161 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CILC C+EVCPV + + D+C+ C C CPV+AI Sbjct: 36 ETCILCNR--CLEVCPVTAISSNFSEIPNINDKCVYCNTCVETCPVNAI 82 >gi|83644719|ref|YP_433154.1| electron transport complex protein RnfB [Hahella chejuensis KCTC 2396] gi|123767479|sp|Q2SKU5|RNFB_HAHCH RecName: Full=Electron transport complex protein rnfB gi|83632762|gb|ABC28729.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Hahella chejuensis KCTC 2396] Length = 197 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 107 VAYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCIDMIP 164 Query: 60 EP-GLELW 66 P G+ W Sbjct: 165 APSGIRDW 172 >gi|84393094|ref|ZP_00991859.1| Fe-S-cluster-containing hydrogenase component 1 [Vibrio splendidus 12B01] gi|84376251|gb|EAP93134.1| Fe-S-cluster-containing hydrogenase component 1 [Vibrio splendidus 12B01] Length = 228 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 Y T N C C + CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 92 YRFTRNSCQHCDNAPCVMVCPTGAAYKDEKTGIVDVHQEKCVGCGYCLLACP 143 >gi|291288473|ref|YP_003505289.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885633|gb|ADD69333.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 221 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 + + V + C C C+ CP ++ EN +A++ D CI CG C CP A Sbjct: 51 VRHFVPKLCNNCDDAPCIAACPTGATFKMENGIVAVNRDTCIGCGRCAEMCPYGA 105 >gi|218885706|ref|YP_002435027.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756660|gb|ACL07559.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 108 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 10/53 (18%) Query: 17 CVEVCP-----VDCFYEGENFLAIHPDECIDCGVCEPECP--VDAIKPDTEPG 62 CV CP ++ F + E H DECI+CG CE CP AIKP T G Sbjct: 24 CVAFCPAKVLVLNAFGKAE---VAHEDECINCGFCELHCPDFAIAIKPRTRNG 73 >gi|82703846|ref|YP_413412.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosospira multiformis ATCC 25196] gi|82411911|gb|ABB76020.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosospira multiformis ATCC 25196] Length = 86 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VC+PECP AI P E + +IN + T+ Sbjct: 7 DECINCDVCQPECPNSAISPGEE-----YYEINPDLCTE 40 >gi|330958152|gb|EGH58412.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. maculicola str. ES4326] Length = 174 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|325143283|gb|EGC65621.1| ferredoxin [Neisseria meningitidis 961-5945] Length = 63 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|297526779|ref|YP_003668803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] gi|297255695|gb|ADI31904.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] Length = 161 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 17 CVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 C +CP + + + I+PD+CI CGVC P+CP AI Sbjct: 45 CANICPFNAIEMEKIYDLPRINPDKCIGCGVCVPQCPGLAI 85 >gi|258513853|ref|YP_003190075.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777558|gb|ACV61452.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 55 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C C +VCPV + E+ A+ DEC++CG C ECP +AI Sbjct: 3 ALVNKEKCIGCGQ--CEDVCPVG-AIKLEDGKAVISDECVECGTCVEECPNEAI 53 >gi|260589999|ref|ZP_05855912.1| ferredoxin [Blautia hansenii DSM 20583] gi|331084315|ref|ZP_08333420.1| hypothetical protein HMPREF0992_02344 [Lachnospiraceae bacterium 6_1_63FAA] gi|260539806|gb|EEX20375.1| ferredoxin [Blautia hansenii DSM 20583] gi|330401850|gb|EGG81427.1| hypothetical protein HMPREF0992_02344 [Lachnospiraceae bacterium 6_1_63FAA] Length = 67 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V T++C+ C C++VCP + + +A + +C+ CG CE ECP IK Sbjct: 8 AFVNTDDCVACGC--CIKVCPRNAIEIWKGIMAKVDIAKCVGCGKCEKECPASVIK 61 >gi|254173144|ref|ZP_04879817.1| oxidoreductase iron-sulfur protein [Thermococcus sp. AM4] gi|214032553|gb|EEB73382.1| oxidoreductase iron-sulfur protein [Thermococcus sp. AM4] Length = 165 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V NC C+ C+ VCP + E+ +A P +CI C +C CP K D E Sbjct: 40 FTVPFNCRHCEKAPCLNVCPTGALFRDEDGAVAFDPLKCIGCLMCAVACPFGIPKLDEE 98 >gi|187733724|ref|YP_001880344.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|187430716|gb|ACD09990.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] Length = 148 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 2 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 61 Query: 60 EPG 62 E G Sbjct: 62 EKG 64 >gi|153837801|ref|ZP_01990468.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ3810] gi|149748822|gb|EDM59661.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ3810] Length = 255 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|150401779|ref|YP_001325545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014482|gb|ABR56933.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 502 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 15/68 (22%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECID-----CGVCEPECPVDAIKP 57 Y E+C+LC CV++CP N + I+ + CID CG+C ECP DAI+ Sbjct: 306 YYNPEDCLLCNV--CVKICP--------NEVRINKETCIDGGCVLCGICVKECPEDAIEI 355 Query: 58 DTEPGLEL 65 P E+ Sbjct: 356 KELPKFEV 363 >gi|197116572|ref|YP_002136999.1| NADH dehydrogenase subunit I [Geobacter bemidjiensis Bem] gi|197085932|gb|ACH37203.1| NADH dehydrogenase I, I subunit [Geobacter bemidjiensis Bem] Length = 176 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 12/65 (18%) Query: 6 TENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC EGEN + I+ CI CG+C CP AI Sbjct: 54 AERCVACYL--CSGACPVDCISMAAAEGENGRRYAAWFRINFSRCILCGMCAEACPTLAI 111 Query: 56 KPDTE 60 + E Sbjct: 112 QMSPE 116 >gi|70731263|ref|YP_261004.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf-5] gi|110287766|sp|Q4K9S9|NUOI_PSEF5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|68345562|gb|AAY93168.1| NADH-quinone oxidoreductase, I subunit [Pseudomonas fluorescens Pf-5] Length = 182 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|116051508|ref|YP_789656.1| electron transport complex protein RnfC [Pseudomonas aeruginosa UCBPP-PA14] gi|115586729|gb|ABJ12744.1| putative NADH:ubiquinone oxidoreductase, subunit RnfC [Pseudomonas aeruginosa UCBPP-PA14] Length = 774 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCARVCPVSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCP 419 >gi|325958247|ref|YP_004289713.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Methanobacterium sp. AL-21] gi|325329679|gb|ADZ08741.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanobacterium sp. AL-21] Length = 80 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E CI C++ CV CP C + I D C CG+C ECPV AIK + E Sbjct: 32 ETCIDCEN--CVMFCPEGCI---DKNYDIDYDYCKGCGICAEECPVKAIKMERE 80 >gi|309785015|ref|ZP_07679648.1| NADH-quinone oxidoreductase, chain I family protein [Shigella dysenteriae 1617] gi|308927385|gb|EFP72859.1| NADH-quinone oxidoreductase, chain I family protein [Shigella dysenteriae 1617] Length = 162 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 40 ERCVACNL--CAVACPVGCISLQKTETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 97 Query: 57 --PDTEPG 62 PD E G Sbjct: 98 LTPDFEMG 105 >gi|303256812|ref|ZP_07342826.1| molybdopterin oxidoreductase [Burkholderiales bacterium 1_1_47] gi|302860303|gb|EFL83380.1| molybdopterin oxidoreductase [Burkholderiales bacterium 1_1_47] Length = 253 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECP 51 C C++ CV+VCP + + +H DE CI C +C+ CP Sbjct: 62 CNHCENPQCVKVCPTGAMFISPEGVVLHNDEACIGCRLCQNACP 105 >gi|294495379|ref|YP_003541872.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalophilus mahii DSM 5219] gi|292666378|gb|ADE36227.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalophilus mahii DSM 5219] Length = 286 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 18 VEVCPVDCFYEGENFLAIHP--------DECIDCGVCEPECPVDAIKPDTE 60 V CP C EN I D+C CG+CE CPVDAIK + + Sbjct: 139 VTGCPSSCMKPQENDFGIMGGLEPEWIDDKCTRCGLCETTCPVDAIKIEND 189 >gi|288559810|ref|YP_003423296.1| pyruvate ferredoxin oxidoreductase-associated PorF [Methanobrevibacter ruminantium M1] gi|288542520|gb|ADC46404.1| pyruvate ferredoxin oxidoreductase-associated PorF [Methanobrevibacter ruminantium M1] Length = 142 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 C+ VCP + I D+CI CG+C CP+ A+ + E G + ++Y TQ Sbjct: 46 CLAVCPKGAIVALGGAITIKQDKCIGCGLCHSVCPIGAVTIN-EIGQATKCDLCADYDTQ 104 Query: 77 W 77 Sbjct: 105 Q 105 >gi|257063420|ref|YP_003143092.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] gi|256791073|gb|ACV21743.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] Length = 210 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y ++ C C + +CV VCP ++ + + ++ + C+ CG C CP A P +P Sbjct: 59 YHISLACNHCANPECVHVCPTGAMHKNDLGLVVVNNERCVGCGYCTIACPYHA--PSIDP 116 Query: 62 GLE 64 L Sbjct: 117 ILR 119 >gi|209761898|gb|ACI79261.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|320645910|gb|EFX14891.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H- str. 493-89] gi|320651210|gb|EFX19645.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H- str. H 2687] Length = 180 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|188585285|ref|YP_001916830.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349972|gb|ACB84242.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 374 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 13/20 (65%), Positives = 16/20 (80%) Query: 37 PDECIDCGVCEPECPVDAIK 56 P +C DCG+C+ CPVDAIK Sbjct: 298 PWKCFDCGICKLACPVDAIK 317 >gi|28898786|ref|NP_798391.1| tetrathionate reductase subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|260364141|ref|ZP_05776847.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus K5030] gi|260877224|ref|ZP_05889579.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AN-5034] gi|260897830|ref|ZP_05906326.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus Peru-466] gi|28807005|dbj|BAC60275.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|308087620|gb|EFO37315.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus Peru-466] gi|308090343|gb|EFO40038.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AN-5034] gi|308115222|gb|EFO52762.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus K5030] Length = 255 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|28898877|ref|NP_798482.1| electron transport complex protein RnfB [Vibrio parahaemolyticus RIMD 2210633] gi|260362455|ref|ZP_05775396.1| electron transport complex protein RnfB [Vibrio parahaemolyticus K5030] gi|260879450|ref|ZP_05891805.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AN-5034] gi|260897153|ref|ZP_05905649.1| electron transport complex protein RnfB [Vibrio parahaemolyticus Peru-466] gi|260902710|ref|ZP_05911105.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AQ4037] gi|33301642|sp|Q87MX3|RNFB_VIBPA RecName: Full=Electron transport complex protein rnfB gi|28807096|dbj|BAC60366.1| RnfB-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087155|gb|EFO36850.1| electron transport complex protein RnfB [Vibrio parahaemolyticus Peru-466] gi|308093524|gb|EFO43219.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AN-5034] gi|308109013|gb|EFO46553.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AQ4037] gi|308113332|gb|EFO50872.1| electron transport complex protein RnfB [Vibrio parahaemolyticus K5030] Length = 198 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|226944925|ref|YP_002799998.1| NADH dehydrogenase subunit I [Azotobacter vinelandii DJ] gi|226719852|gb|ACO79023.1| NADH-quinone oxidoreductase, chain I [Azotobacter vinelandii DJ] Length = 182 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|301064419|ref|ZP_07204844.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441501|gb|EFK05841.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 369 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + C+ C DCV C E I+ ++C+ CG C CP +AI + Sbjct: 191 VKRKKCVGCG--DCVRHCAGSAISLKEKKAFINTEKCVGCGECILICPNEAIDVRWSRDI 248 Query: 64 ELWLKINSEYA 74 L+ K +EYA Sbjct: 249 PLFQKKMAEYA 259 >gi|254672827|emb|CBA06992.1| Ferredoxin [Neisseria meningitidis alpha275] Length = 61 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +IN TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EINPNLCTQ 40 >gi|197121507|ref|YP_002133458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|220916274|ref|YP_002491578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|196171356|gb|ACG72329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|219954128|gb|ACL64512.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 100 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 20/111 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE CI C C CP +G++ I+PD C +C C CPVD Sbjct: 1 MATFITEECINCGA--CEPECPNSAISQGDDIYVINPDLCTECVGFHGEEACAAVCPVDC 58 Query: 55 IKPD---TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PD TE + + K+ AT P+ T PS A++ ++ K Sbjct: 59 CVPDPNRTETEEQNYGKL----ATIHPDKT-----FPSLAELTAELSRFRK 100 >gi|55377023|ref|YP_134873.1| ferredoxin [Haloarcula marismortui ATCC 43049] gi|55229748|gb|AAV45167.1| ferredoxin [Haloarcula marismortui ATCC 43049] Length = 109 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 11/70 (15%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--------EGE-NFLAIHPDECIDCGVCEPECPV 52 T+V + I C+E CPVD F E E H D+CIDC +C CPV Sbjct: 37 THVAVDFDICIADGACLEDCPVDVFEWVDTPDHPESEIKADPAHEDQCIDCMLCVDVCPV 96 Query: 53 DAIKPDTEPG 62 DAI D +PG Sbjct: 97 DAI--DVDPG 104 >gi|329889339|ref|ZP_08267682.1| NADH-quinone oxidoreductase subunit 9 [Brevundimonas diminuta ATCC 11568] gi|328844640|gb|EGF94204.1| NADH-quinone oxidoreductase subunit 9 [Brevundimonas diminuta ATCC 11568] Length = 151 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 50 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMVKCIYCGLCQEACPVDAIV 107 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 NSE+AT+ T++E L A++ ++E+ + N Sbjct: 108 EGP----------NSEFATE-----TREELLYDKARLLDNGDRWERLIAKN 143 >gi|328474655|gb|EGF45460.1| tetrathionate reductase subunit B [Vibrio parahaemolyticus 10329] Length = 255 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|311694181|gb|ADP97054.1| electron transport complex, RnfABCDGE type, B subunit [marine bacterium HP15] Length = 140 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + + + CI C T C++ CPVD + + EC C +C CPVD I T Sbjct: 56 VAVIREDECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVDPCPVDCIDMVT 113 Query: 60 -EPGLELW 66 EP + W Sbjct: 114 VEPDIRTW 121 >gi|207859432|ref|YP_002246083.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206711235|emb|CAR35611.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 223 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP--DTE 60 +C C H CV+VCP + + ++PD C+ C C CP V I P T Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSKTA 149 Query: 61 PGLELWLKINSEYATQ 76 + KIN + Q Sbjct: 150 DKCDFCRKINLKAGKQ 165 >gi|150390052|ref|YP_001320101.1| electron transport complex, RnfABCDGE type, B subunit [Alkaliphilus metalliredigens QYMF] gi|149949914|gb|ABR48442.1| electron transport complex, RnfABCDGE type, B subunit [Alkaliphilus metalliredigens QYMF] Length = 328 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 5/49 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C + CPVD EGE I D+CI CGVCE +CP DAI Sbjct: 279 CIGC--TICKKNCPVDAI-EGELKENHKIIEDKCIGCGVCEQKCPKDAI 324 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 17 CVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CVE CP E IH D CI C +C+ CPVDAI+ + + Sbjct: 253 CVEKCPTKAIEGQLEKRKKALIHEDLCIGCTICKKNCPVDAIEGELK 299 >gi|149921106|ref|ZP_01909564.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Plesiocystis pacifica SIR-1] gi|149817993|gb|EDM77452.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Plesiocystis pacifica SIR-1] Length = 820 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 16/97 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAIK---- 56 ++ +C CK+ C+ CP EGE F I + C CG C CP + I+ Sbjct: 362 LLPNSCQHCKNPSCMLDCPTGAVGRDPEGEVF--IREELCTGCGACAKACPWENIRMAPR 419 Query: 57 -PDT------EPGLELWLKINSEYATQWPNITTKKES 86 P + EP E + + +P + TK +S Sbjct: 420 GPSSAQQRWGEPLREAAERKGMDLLAMFPEVATKCDS 456 >gi|78223444|ref|YP_385191.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] gi|78194699|gb|ABB32466.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] Length = 371 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CPV L I ++CI CG+C CP AI Sbjct: 299 CIACGL--CAKRCPVRGVTSIMGPLHISEEKCIGCGLCVTTCPTQAI 343 >gi|317493927|ref|ZP_07952344.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918254|gb|EFV39596.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 204 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/70 (25%), Positives = 30/70 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ + + ++ C+ C +C CP AI + L + Sbjct: 51 CHQCEDAPCAQVCPVNAITHTNDSIQLNESLCVSCKLCGIACPFGAITMNGSKPLHIPAN 110 Query: 69 INSEYATQWP 78 N+ A P Sbjct: 111 SNTPMALPAP 120 >gi|260901541|ref|ZP_05909936.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ4037] gi|308110900|gb|EFO48440.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ4037] Length = 255 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|258620204|ref|ZP_05715243.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM573] gi|258587562|gb|EEW12272.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM573] Length = 244 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 113 KSCQHCENPPCVYVCPTGATYKDEATGIVDVHKERCVGCGYCIAACP 159 >gi|228470926|ref|ZP_04055771.1| f420H2:quinone oxidoreductase [Porphyromonas uenonis 60-3] gi|228307323|gb|EEK16337.1| f420H2:quinone oxidoreductase [Porphyromonas uenonis 60-3] Length = 394 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 12 CKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C +VCP +C EG + + + CI+C CE CP + EP Sbjct: 11 CGCEACRQVCPKECIRLERDEEGFGYPVVDLERCIECHKCERVCPFMQLGAPREP 65 >gi|223982716|ref|ZP_03632946.1| hypothetical protein HOLDEFILI_00220 [Holdemania filiformis DSM 12042] gi|223965312|gb|EEF69594.1| hypothetical protein HOLDEFILI_00220 [Holdemania filiformis DSM 12042] Length = 201 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T C C C+ VCP C I + C+ CG C+ CP A+ Sbjct: 145 MRYGITAKCDGC--GVCLSVCPQQCIELTGKQAHIRQEHCLHCGQCQQHCPKQAV 197 >gi|242281199|ref|YP_002993328.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242124093|gb|ACS81789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 428 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 10/52 (19%) Query: 17 CVEVCPVDCF-YEGEN---------FLAIHPDECIDCGVCEPECPVDAIKPD 58 C CP+D EN F I+ + C+ CGVC +CP A++ D Sbjct: 300 CARACPIDAITMHKENVPGAEKPRRFAEINKNICLGCGVCALKCPTGALQMD 351 >gi|209920159|ref|YP_002294243.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli SE11] gi|209913418|dbj|BAG78492.1| formate hydrogenlyase subunit [Escherichia coli SE11] gi|324017033|gb|EGB86252.1| hydrogenase 4 subunit H [Escherichia coli MS 117-3] Length = 180 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|195953852|ref|YP_002122142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195933464|gb|ACG58164.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 165 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK--P 57 ++Y + NC C CV CP + ++ L D CI C C CP AI P Sbjct: 45 ISYFMPMNCFHCDVAPCVYACPTSAMTKRDDGLVFVRDNLCIGCKACIIACPYGAISFNP 104 Query: 58 DTEPGLELWLKINSEYATQWPNITTK 83 +TE ++ IN P+ TK Sbjct: 105 ETEKVVKCDFCINRLEKGLLPSCVTK 130 >gi|126460205|ref|YP_001056483.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249926|gb|ABO09017.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 215 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+ CP Y+ E+ L ++ D CI CG C CP A Sbjct: 83 VPKQCNHCENAPCVKPCPTGATYKTEDGLVLVNDDLCIGCGACIQACPYGA 133 >gi|158522308|ref|YP_001530178.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511134|gb|ABW68101.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 378 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query: 4 VVTENCILCKHTDCVEVCP---VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V T+ CI C DCV C + EGE I+ ++C+ CG C CP +++ Sbjct: 197 VKTKTCIGCG--DCVAHCAHGAIRLVKEGEKKALINEEKCVGCGECIVVCPTGSVQ 250 >gi|85703194|ref|ZP_01034298.1| NADH dehydrogenase subunit I [Roseovarius sp. 217] gi|85672122|gb|EAQ26979.1| NADH dehydrogenase subunit I [Roseovarius sp. 217] Length = 164 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P+ CI C +CE CP AI D EP Sbjct: 41 EKGPLSVRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIDAEP 86 >gi|187731222|ref|YP_001881533.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella boydii CDC 3083-94] gi|187428214|gb|ACD07488.1| formate hydrogenlyase, subunit F [Shigella boydii CDC 3083-94] Length = 180 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|94310165|ref|YP_583375.1| benzoyl-CoA oxygenase subunit A [Cupriavidus metallidurans CH34] gi|93354017|gb|ABF08106.1| Benzoyl-CoA oxygenase component A [Cupriavidus metallidurans CH34] Length = 415 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRC--NTCEDTCPIDAITHDDRNYVVKADVCNACNACLSPCPTGAI 61 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHD 35 >gi|316965841|gb|EFV50509.1| putative ABC transporter, ATP-binding protein [Trichinella spiralis] Length = 610 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 11/66 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDE---------CIDCGVCEPE 49 +T + N CK +C +VC C G+ + + P CI CG+C + Sbjct: 15 ITRIAIVNNDRCKPKNCGQVCKKSCPVVRMGKLCIEVTPSSKIAFISESLCIGCGICVKK 74 Query: 50 CPVDAI 55 CP DAI Sbjct: 75 CPYDAI 80 >gi|302392713|ref|YP_003828533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302204790|gb|ADL13468.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 100 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 16 DCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 +C+ +CP + Y+ ++ + + C DCG C +CP +AI + +E+ + +S Sbjct: 15 ECIRICPGNLLYQAQSGAIMIRNKKNCWDCGACVKKCPQEAI--EMYLPVEIGGRGSSLK 72 Query: 74 ATQWPNITTKKESLPSAAKMDGVKQKY 100 A+Q N + + K DG K+++ Sbjct: 73 ASQKEN-----KLIWKLKKFDGSKKQF 94 >gi|297617602|ref|YP_003702761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145439|gb|ADI02196.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 287 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 C+ C C+EVCP + + E +H P CI C C CP + K Sbjct: 72 HQCMHCDEPACMEVCPRQAYSKNEWGATVHDPSRCIGCQYCHYACPWNVPK 122 >gi|296166768|ref|ZP_06849191.1| formate dehydrogenase-O, beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897880|gb|EFG77463.1| formate dehydrogenase-O, beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 339 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 + ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 156 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 208 >gi|253989599|ref|YP_003040955.1| electron transport complex protein RnfB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781049|emb|CAQ84211.1| 4Fe-4S ferredoxin, iron-sulphur binding [Photorhabdus asymbiotica] Length = 205 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 109 VAFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|220935354|ref|YP_002514253.1| sulfite reductase, dissimilatory-type beta subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219996664|gb|ACL73266.1| sulfite reductase, dissimilatory-type beta subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 359 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 4/72 (5%) Query: 11 LCKHTDCVEVCPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ V CPV G+ L + +CI CG C P CP I L +W Sbjct: 204 VCERPSVVARCPVAAIRPALVNGKPSLEVDEKKCICCGACYPPCPPMQINDAEHTKLAIW 263 Query: 67 LKINSEYATQWP 78 + N A P Sbjct: 264 VGGNHSNARGKP 275 >gi|160888148|ref|ZP_02069151.1| hypothetical protein BACUNI_00556 [Bacteroides uniformis ATCC 8492] gi|317478948|ref|ZP_07938095.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|156862283|gb|EDO55714.1| hypothetical protein BACUNI_00556 [Bacteroides uniformis ATCC 8492] gi|316904925|gb|EFV26732.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 486 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I D CI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAI 169 >gi|118474328|ref|YP_891343.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413554|gb|ABK81974.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. fetus 82-40] Length = 211 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 23/56 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ C C C VCP ++ +H CI C +C CP AI D+ Sbjct: 49 VMPNQCRQCDDAPCALVCPSSALRNENGYVEMHEQLCIGCALCVNACPYGAIHLDS 104 >gi|62182728|ref|YP_219145.1| putative nitrite reductase; formate-dependent, Fe-S centers [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224586045|ref|YP_002639844.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62130361|gb|AAX68064.1| putative nitrite reductase; formate-dependent, Fe-S centers [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224470573|gb|ACN48403.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322717228|gb|EFZ08799.1| Protein nrfC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326630202|gb|EGE36545.1| putative nitrite reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 223 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKP--DTE 60 +C C H CV+VCP + + ++PD C+ C C CP V I P T Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVSKTA 149 Query: 61 PGLELWLKINSEYATQ 76 + KIN + Q Sbjct: 150 DKCDFCRKINLKAGKQ 165 >gi|332754929|gb|EGJ85294.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri 4343-70] Length = 162 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 40 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 97 Query: 57 --PDTEPG 62 PD E G Sbjct: 98 LTPDFEMG 105 >gi|307720678|ref|YP_003891818.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978771|gb|ADN08806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 187 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 12 CKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C+H D C EVCP Y EN + ++ D+CI C C CP DA D Sbjct: 64 CQHCDDAPCEEVCPTHATYYDENGVVRVNADKCILCSYCMNACPYDARYVD 114 >gi|289191966|ref|YP_003457907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938416|gb|ADC69171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 141 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C C+ CP + + + + D+CI CG+C CP AI+ D + +K Sbjct: 33 CMHCDKNPCLYACPENAIERINDKVVVIKDKCIGCGLCALACPFGAIRIDG-----VAIK 87 Query: 69 INSEYATQWPNITTKKESLPSAA 91 N Y ++ KE P+ A Sbjct: 88 CNGCYKR---DVEICKEVCPTGA 107 >gi|224023700|ref|ZP_03642066.1| hypothetical protein BACCOPRO_00416 [Bacteroides coprophilus DSM 18228] gi|224016922|gb|EEF74934.1| hypothetical protein BACCOPRO_00416 [Bacteroides coprophilus DSM 18228] Length = 322 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + +CI C CV+VCP + N I P +C C CE ECP AI Sbjct: 218 SASCIGC--GKCVKVCPFEAITLENNLAYIDPAKCKSCRKCEMECPKGAI 265 >gi|158334815|ref|YP_001515987.1| 4Fe-4S type ferredoxin [Acaryochloris marina MBIC11017] gi|158305056|gb|ABW26673.1| ferredoxin, 4Fe-4S type [Acaryochloris marina MBIC11017] Length = 378 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 9/49 (18%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPD 58 CV+VCP D + D C CG C P CP++ I KPD Sbjct: 107 CVQVCPADAIAFPSP--GVMSDRCYGCGRCLPVCPIEQIATVSHTAKPD 153 >gi|86157250|ref|YP_464035.1| formate dehydrogenase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85773761|gb|ABC80598.1| formate dehydrogenase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 310 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++++ C C+ C+E CP E + I PD C CG C CP + Sbjct: 125 MMSDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVV 177 >gi|16755057|gb|AAL26702.1| 68 kDa protein HP68 [Triticum aestivum] Length = 604 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+EV PV I + CI CG+C +CP DAI+ Sbjct: 38 CIEVSPV------AKLAFISEELCIGCGICVKKCPFDAIE 71 >gi|315652760|ref|ZP_07905734.1| electron transfer flavoprotein alpha subunit [Eubacterium saburreum DSM 3986] gi|315484962|gb|EFU75370.1| electron transfer flavoprotein alpha subunit [Eubacterium saburreum DSM 3986] Length = 393 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+ VV E +C C T CV+ CP D EN A+ C CG C CP DAI D Sbjct: 1 MSVVVIEKDCRGC--TKCVKSCPFDAITM-ENKKAVIGIACTSCGTCIEVCPFDAIVKD 56 >gi|270297051|ref|ZP_06203250.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273038|gb|EFA18901.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 486 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I D CI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAI 169 >gi|220915989|ref|YP_002491293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953843|gb|ACL64227.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 310 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C+ C+E CP E + I PD C CG C CP + + G Sbjct: 125 MMSDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVVDRREDDG 184 >gi|332797651|ref|YP_004459151.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] gi|332695386|gb|AEE94853.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidianus hospitalis W1] Length = 633 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Query: 7 ENCILCKHTDCVEVCPVD------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ CK DC CPV F + F ++ +CI G C CP D I Sbjct: 564 QQCLNCKTVDCATACPVGLTDMRASFIKNGEFRSM---KCIGIGECVNACPYDNI 615 >gi|323697506|ref|ZP_08109418.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323457438|gb|EGB13303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 58 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP D EG+N+ I D CIDCG CE EC +AI Sbjct: 15 CQSVCPSDAIIHPEGKNYYEITED-CIDCGSCEAECGFNAIS 55 >gi|301057791|ref|ZP_07198860.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300448102|gb|EFK11798.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 574 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 24/71 (33%) Query: 7 ENCILCKHTDCVEVCPVDCF----------------------YEGENFLAIHPDECIDCG 44 E CI C++ C++V P DC +E N + I CI CG Sbjct: 494 ERCIYCRY--CIDVAPRDCIKLVNGVETNDDGAIIGFVETSEWEKVNAVIIDNKRCIRCG 551 Query: 45 VCEPECPVDAI 55 C CP+D I Sbjct: 552 ECVRVCPMDCI 562 >gi|294141107|ref|YP_003557085.1| electron transport complex protein rnfB [Shewanella violacea DSS12] gi|293327576|dbj|BAJ02307.1| electron transport complex protein rnfB [Shewanella violacea DSS12] Length = 189 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGAGKLMHTVITDYCTGCDLCVEPCPVDCI 159 >gi|269105012|ref|ZP_06157708.1| hydrogenase 4 Fe-S subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268161652|gb|EEZ40149.1| hydrogenase 4 Fe-S subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 216 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C+H + C VCPV + ++ + ++ C+ C +C CP AI D + + Sbjct: 63 VMCRHCEDAPCAAVCPVQAITKQDDRVLLNETLCVGCTLCAVACPFGAIAFDGSRPIAMA 122 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMD 94 + Y P + S+PS D Sbjct: 123 NSYDI-YIPSTPRSSNPSTSIPSTFGQD 149 >gi|237654368|ref|YP_002890682.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237625615|gb|ACR02305.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 710 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI--KPDT 59 + ++ C LC C CP + L C+ CG+CE CP AI +P Sbjct: 569 IASDACTLC--MSCTGACPAGALRAASDAYRLEFVEKNCLQCGLCEASCPESAITLEPRL 626 Query: 60 EPG 62 PG Sbjct: 627 LPG 629 >gi|242277663|ref|YP_002989792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120557|gb|ACS78253.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 259 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 10 ILCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-TEPGLE 64 +LC H + CV VCP F + +A+ CI C C CP A + ++P L Sbjct: 118 LLCNHCESPSCVRVCPTKATFKRPDGIVAMDYHRCIGCRYCMTGCPYGARSFNFSDPRLH 177 Query: 65 LWL-KINSEYATQWPNITTK 83 + + KIN ++ T+ + K Sbjct: 178 MDMDKINEKFPTRMRGVVEK 197 >gi|145614552|ref|XP_362155.2| hypothetical protein MGG_11382 [Magnaporthe oryzae 70-15] gi|145021461|gb|EDK05590.1| hypothetical protein MGG_11382 [Magnaporthe oryzae 70-15] Length = 606 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 11/49 (22%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAI 55 +C + CPV G+ + + PD CI CG+C +CP DAI Sbjct: 20 ECKKSCPV--VRSGKLCIEVSPDSRIAYLSETLCIGCGICPKKCPFDAI 66 >gi|91226902|ref|ZP_01261499.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 12G01] gi|91188865|gb|EAS75150.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 12G01] Length = 255 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|70607815|ref|YP_256685.1| hypothetical protein Saci_2098 [Sulfolobus acidocaldarius DSM 639] gi|68568463|gb|AAY81392.1| conserved Archaeal membrane protein [Sulfolobus acidocaldarius DSM 639] Length = 467 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA---IHPDECIDCGVCEPECPVDAI 55 + C+ CK DC CPV NF+ +CI G C CP D I Sbjct: 394 QQCLNCKTVDCALACPVGLTDMRANFIKKGEFKSFKCIGVGDCVEACPHDNI 445 >gi|325969146|ref|YP_004245338.1| indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Vulcanisaeta moutnovskia 768-28] gi|323708349|gb|ADY01836.1| indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Vulcanisaeta moutnovskia 768-28] Length = 616 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I P+ C+ C VC CP DAIKP E ++ WL+ Sbjct: 580 IDPNMCVGCSVCAQVCPYDAIKP--EGNVKDWLR 611 >gi|313672286|ref|YP_004050397.1| NADH-quinone oxidoreductase, chain i [Calditerrivibrio nitroreducens DSM 19672] gi|312939042|gb|ADR18234.1| NADH-quinone oxidoreductase, chain I [Calditerrivibrio nitroreducens DSM 19672] Length = 145 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 10/49 (20%) Query: 17 CVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 C +VCP +C + GE + I D CI CG CE CP DAI Sbjct: 66 CQKVCPSECIHIETDAGPNGERLIRKFEIELDRCIYCGFCEEACPKDAI 114 >gi|283787038|ref|YP_003366903.1| polyferredoxin [Citrobacter rodentium ICC168] gi|282950492|emb|CBG90157.1| putative polyferredoxin [Citrobacter rodentium ICC168] Length = 285 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 13 KHT--DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +HT C + CPV N + + CI CG C CPVDA++ Sbjct: 20 RHTCDACRQACPVGAISFTANAATLDSERCIRCGHCAFACPVDALE 65 >gi|242399760|ref|YP_002995185.1| Indolepyruvate: ferredoxin oxidoreductase (IOR), subunit alpha [Thermococcus sibiricus MM 739] gi|242266154|gb|ACS90836.1| Indolepyruvate: ferredoxin oxidoreductase (IOR), subunit alpha [Thermococcus sibiricus MM 739] Length = 632 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 24/52 (46%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ + C CK + CP F E +++ C CG+CE CP D I Sbjct: 575 VIKDKCTGCKACALLTGCPALVFDEERGKISVDSLICTGCGLCEQLCPFDVI 626 >gi|240102880|ref|YP_002959189.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] gi|239910434|gb|ACS33325.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] Length = 204 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V NC C++ C+EVCP ++ E+ + + +CI C +C CP + DT Sbjct: 60 AYNVPMNCRHCENAPCMEVCPTGAIFKDEDGAVLVDTSKCIGCKMCAIVCPFGIPEFDTL 119 Query: 61 PGL 63 G+ Sbjct: 120 NGV 122 >gi|238753747|ref|ZP_04615108.1| NADH-quinone oxidoreductase subunit I [Yersinia ruckeri ATCC 29473] gi|238707983|gb|EEQ00340.1| NADH-quinone oxidoreductase subunit I [Yersinia ruckeri ATCC 29473] Length = 180 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHQDGRWYPEFFRVNFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|163741305|ref|ZP_02148697.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161385658|gb|EDQ10035.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] Length = 431 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +T +C LC+ C VCP + EN L +C+ CG+C C +AI+ P Sbjct: 246 LTGDCTLCQA--CTWVCPTNALIGAENGGGLDFVEADCMQCGLCVSVCRQNAIR--LVPR 301 Query: 63 LEL 65 LEL Sbjct: 302 LEL 304 >gi|148270023|ref|YP_001244483.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga petrophila RKU-1] gi|147735567|gb|ABQ46907.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermotoga petrophila RKU-1] Length = 357 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YVV E C+ C C + CPV I ++CI CG C C A+ P + Sbjct: 189 YVVEEKCVAC--GTCAKFCPVGAITV-TKVAKIDYEKCIGCGQCIAMCSYGAMSPKWDSS 245 Query: 63 LELWLKINSEYA 74 + K +EYA Sbjct: 246 TDSLSKKMAEYA 257 >gi|134045159|ref|YP_001096645.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662784|gb|ABO34430.1| membrane-bound hydrogenase subunit ehaR [Methanococcus maripaludis C5] Length = 252 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 NC++C E+CPV + + + +CI CG CE CPV AI Sbjct: 203 NCMVCS-----EICPVGAIIYEDGLMKLDDKKCIFCGKCEKNCPVTAI 245 >gi|117621401|ref|YP_857038.1| hydrogenase 2 protein HybA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562808|gb|ABK39756.1| hydrogenase-2 operon protein HybA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 341 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H PD C C C CP D K D Sbjct: 109 IKKQCMHCVDPNCVSVCPVQALTKDPKTGIVHYDPDVCTGCRYCMVGCPFDVPKYD 164 >gi|78222168|ref|YP_383915.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Geobacter metallireducens GS-15] gi|78193423|gb|ABB31190.1| Indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative [Geobacter metallireducens GS-15] Length = 601 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++ C C++ CP + E E +AI C DCGVC CP AI+ Sbjct: 546 ISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIE 597 >gi|84516958|ref|ZP_01004315.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] gi|84509076|gb|EAQ05536.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] Length = 253 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + ++ +CI C +C CP A + D + G+ Sbjct: 80 KSCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEADCIGCSLCAWACPYGARELDAKAGV 138 >gi|157157477|ref|YP_001464032.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli E24377A] gi|218696314|ref|YP_002403981.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 55989] gi|256019501|ref|ZP_05433366.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] gi|260856827|ref|YP_003230718.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O26:H11 str. 11368] gi|260869395|ref|YP_003235797.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O111:H- str. 11128] gi|293449036|ref|ZP_06663457.1| hycF [Escherichia coli B088] gi|300820495|ref|ZP_07100646.1| hydrogenase 4 subunit H [Escherichia coli MS 119-7] gi|300906777|ref|ZP_07124459.1| hydrogenase 4 subunit H [Escherichia coli MS 84-1] gi|300919244|ref|ZP_07135767.1| hydrogenase 4 subunit H [Escherichia coli MS 115-1] gi|300922238|ref|ZP_07138364.1| hydrogenase 4 subunit H [Escherichia coli MS 182-1] gi|301305389|ref|ZP_07211483.1| hydrogenase 4 subunit H [Escherichia coli MS 124-1] gi|301326245|ref|ZP_07219628.1| hydrogenase 4 subunit H [Escherichia coli MS 78-1] gi|331669453|ref|ZP_08370299.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA271] gi|331678694|ref|ZP_08379368.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H591] gi|332280623|ref|ZP_08393036.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] gi|157079507|gb|ABV19215.1| formate hydrogenlyase, subunit F [Escherichia coli E24377A] gi|218353046|emb|CAU98871.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli 55989] gi|257755476|dbj|BAI26978.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O26:H11 str. 11368] gi|257765751|dbj|BAI37246.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O111:H- str. 11128] gi|291322126|gb|EFE61555.1| hycF [Escherichia coli B088] gi|300401471|gb|EFJ85009.1| hydrogenase 4 subunit H [Escherichia coli MS 84-1] gi|300413689|gb|EFJ96999.1| hydrogenase 4 subunit H [Escherichia coli MS 115-1] gi|300421368|gb|EFK04679.1| hydrogenase 4 subunit H [Escherichia coli MS 182-1] gi|300526759|gb|EFK47828.1| hydrogenase 4 subunit H [Escherichia coli MS 119-7] gi|300839309|gb|EFK67069.1| hydrogenase 4 subunit H [Escherichia coli MS 124-1] gi|300847090|gb|EFK74850.1| hydrogenase 4 subunit H [Escherichia coli MS 78-1] gi|315254502|gb|EFU34470.1| hydrogenase 4 subunit H [Escherichia coli MS 85-1] gi|320202370|gb|EFW76940.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli EC4100B] gi|323154936|gb|EFZ41128.1| formate hydrogenlyase subunit 6 [Escherichia coli EPECa14] gi|323180141|gb|EFZ65693.1| formate hydrogenlyase subunit 6 [Escherichia coli 1180] gi|323183247|gb|EFZ68644.1| formate hydrogenlyase subunit 6 [Escherichia coli 1357] gi|323946399|gb|EGB42427.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324119970|gb|EGC13848.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|331063121|gb|EGI35034.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA271] gi|331073524|gb|EGI44845.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H591] gi|332102975|gb|EGJ06321.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sp. D9] Length = 180 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|116751281|ref|YP_847968.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700345|gb|ABK19533.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 358 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----KPDTEPG 62 E C V+ + +F I D CI CG+C CP +AI + EPG Sbjct: 286 ERCQVEAIRDEGDFYRIVGDRCIGCGLCATTCPEEAIALMRRQPEEPG 333 >gi|323978670|gb|EGB73752.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 180 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|319901972|ref|YP_004161700.1| hydrogenase large subunit domain protein [Bacteroides helcogenes P 36-108] gi|319417003|gb|ADV44114.1| hydrogenase large subunit domain protein [Bacteroides helcogenes P 36-108] Length = 486 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP + E+ A I D CI CG+C CP AI Sbjct: 114 INYEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAI 169 >gi|294675135|ref|YP_003575751.1| aldo/keto reductase family oxidoreductase [Prevotella ruminicola 23] gi|294472046|gb|ADE81435.1| oxidoreductase, aldo/keto reductase family [Prevotella ruminicola 23] Length = 468 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 11/16 (68%), Positives = 11/16 (68%) Query: 36 HPDECIDCGVCEPECP 51 PD CI CG CEP CP Sbjct: 425 QPDHCIQCGQCEPHCP 440 >gi|283852140|ref|ZP_06369414.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283572530|gb|EFC20516.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 576 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + P +CI CG+CE ECPV ++ Sbjct: 536 VDPGKCIGCGMCEHECPVSGLR 557 >gi|264678475|ref|YP_003278382.1| electron transport complex, RnfABCDGE type, B [Comamonas testosteroni CNB-2] gi|262208988|gb|ACY33086.1| electron transport complex, RnfABCDGE type, B [Comamonas testosteroni CNB-2] Length = 220 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 21/97 (21%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C++ CP D + ++ + C C +C P CPVD I+ L Sbjct: 90 CIGC--TLCIKACPTDAILGANKRMHSVSAEHCTGCELCIPVCPVDCIE----------L 137 Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 S AT W S SAA+ + + +Y + Sbjct: 138 VNASAEATGW--------SAWSAAQAEHARHRYGVHL 166 >gi|262117753|dbj|BAI47848.1| putative reductive dehalogenase [uncultured bacterium] Length = 459 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 9/70 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGV---------CEPECPVDAI 55 +TENC + + C E P Y+ L + P + ID GV C CP +I Sbjct: 282 LTENCRMSLTSMCPEHGPQMRIYKVITSLPLAPTKPIDFGVFKFCSTCKLCADACPAGSI 341 Query: 56 KPDTEPGLEL 65 K DTEP ++ Sbjct: 342 KDDTEPSWDI 351 >gi|218459472|ref|ZP_03499563.1| NADH:ubiquinone oxidoreductase subunit 6 (chain I) [Rhizobium etli Kim 5] Length = 205 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 62 KCVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 117 >gi|218706214|ref|YP_002413733.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli UMN026] gi|293406212|ref|ZP_06650138.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli FVEC1412] gi|298381949|ref|ZP_06991546.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli FVEC1302] gi|300899959|ref|ZP_07118162.1| hydrogenase 4 subunit H [Escherichia coli MS 198-1] gi|331664274|ref|ZP_08365180.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA143] gi|218433311|emb|CAR14211.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli UMN026] gi|284922656|emb|CBG35744.1| formate hydrogenlyase subunit 6 [Escherichia coli 042] gi|291426218|gb|EFE99250.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli FVEC1412] gi|298277089|gb|EFI18605.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli FVEC1302] gi|300356468|gb|EFJ72338.1| hydrogenase 4 subunit H [Escherichia coli MS 198-1] gi|331058205|gb|EGI30186.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA143] Length = 180 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|218555264|ref|YP_002388177.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli IAI1] gi|300815876|ref|ZP_07096100.1| hydrogenase 4 subunit H [Escherichia coli MS 107-1] gi|218362032|emb|CAQ99639.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli IAI1] gi|300531805|gb|EFK52867.1| hydrogenase 4 subunit H [Escherichia coli MS 107-1] Length = 180 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVEADLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|212223688|ref|YP_002306924.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] gi|212008645|gb|ACJ16027.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] Length = 163 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 NC C+ C+EVCP Y E+ + I +CI C +C CP P +P EL Sbjct: 44 NCRHCEKAPCIEVCPTKAIYRDEDGAVVIDESKCIGCYMCSAVCPYAI--PIVDPIKELA 101 Query: 67 LK 68 +K Sbjct: 102 VK 103 >gi|90408373|ref|ZP_01216536.1| electron transport complex protein RnfB [Psychromonas sp. CNPT3] gi|90310536|gb|EAS38658.1| electron transport complex protein RnfB [Psychromonas sp. CNPT3] Length = 190 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CP D I Sbjct: 105 LAFIREDECIGC--TKCIQACPVDAILGATRQMHTVITDECTGCELCVAPCPTDCI 158 >gi|312880741|ref|ZP_07740541.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] gi|310784032|gb|EFQ24430.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] Length = 267 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C C +CP E L + D C+ C C CP DA++ Sbjct: 196 DRCVRCGR--CARLCPAGNIAWQEGLLPVWQDRCVVCQRCAAVCPHDAVR 243 >gi|297584150|ref|YP_003699930.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297142607|gb|ADH99364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 182 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ +C C+ +C+ VCP F + + + ++ C CG+C CP DAI Sbjct: 47 LSSSCHHCQSPECLRVCPKQTFSKDRDGIVKLNEQICDGCGLCAAACPFDAI 98 >gi|293412078|ref|ZP_06654801.1| 4Fe-4S ferredoxin [Escherichia coli B354] gi|291468849|gb|EFF11340.1| 4Fe-4S ferredoxin [Escherichia coli B354] Length = 180 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDIATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|163736166|ref|ZP_02143585.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] gi|161390036|gb|EDQ14386.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] Length = 415 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +T +C LC+ C VCP + EN L +C+ CG+C C +AI+ P Sbjct: 230 LTGDCTLCQA--CTWVCPTNALIGAENGGGLDFVEADCMQCGLCVSVCRQNAIR--LVPR 285 Query: 63 LEL 65 LEL Sbjct: 286 LEL 288 >gi|157165183|ref|YP_001467594.1| methyl-accepting chemotaxis sensory transducer [Campylobacter concisus 13826] gi|157101508|gb|EAT98488.2| selenate reductase subunit beta (Selenate reductaseiron-sulfur subunit) [Campylobacter concisus 13826] Length = 245 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H + C++VCP Y+ N + I ECI C +C CP A Sbjct: 93 LCNHCNKPACIDVCPTGASYQRSNGIVKIDTKECIGCALCVEACPYHA 140 >gi|15803237|ref|NP_289269.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 EDL933] gi|15832830|ref|NP_311603.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. Sakai] gi|74313287|ref|YP_311706.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella sonnei Ss046] gi|82545205|ref|YP_409152.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella boydii Sb227] gi|110806653|ref|YP_690173.1| formate hydrogenlyase complex iron-sulfur subunit [Shigella flexneri 5 str. 8401] gi|157162166|ref|YP_001459484.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli HS] gi|168749955|ref|ZP_02774977.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4113] gi|168755465|ref|ZP_02780472.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4401] gi|168762881|ref|ZP_02787888.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4501] gi|168768811|ref|ZP_02793818.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4486] gi|168774748|ref|ZP_02799755.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4196] gi|168778702|ref|ZP_02803709.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4076] gi|168787975|ref|ZP_02812982.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC869] gi|168800199|ref|ZP_02825206.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC508] gi|170019034|ref|YP_001723988.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli ATCC 8739] gi|188492377|ref|ZP_02999647.1| iron-sulfur binding domain protein [Escherichia coli 53638] gi|191166826|ref|ZP_03028652.1| formate hydrogenlyase, subunit F [Escherichia coli B7A] gi|193065016|ref|ZP_03046091.1| formate hydrogenlyase, subunit F [Escherichia coli E22] gi|194427901|ref|ZP_03060447.1| formate hydrogenlyase, subunit F [Escherichia coli B171] gi|194438985|ref|ZP_03071069.1| formate hydrogenlyase, subunit F [Escherichia coli 101-1] gi|195938470|ref|ZP_03083852.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. EC4024] gi|208805909|ref|ZP_03248246.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4206] gi|208813713|ref|ZP_03255042.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4045] gi|208818938|ref|ZP_03259258.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4042] gi|209396172|ref|YP_002272183.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4115] gi|217327035|ref|ZP_03443118.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. TW14588] gi|218547772|ref|YP_002381563.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia fergusonii ATCC 35469] gi|253772425|ref|YP_003035256.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037759|ref|ZP_04871817.1| formate hydrogenlyase [Escherichia sp. 1_1_43] gi|254162651|ref|YP_003045759.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B str. REL606] gi|254794660|ref|YP_003079497.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. TW14359] gi|260845363|ref|YP_003223141.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O103:H2 str. 12009] gi|261226014|ref|ZP_05940295.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256728|ref|ZP_05949261.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O157:H7 str. FRIK966] gi|291284047|ref|YP_003500865.1| Formate hydrogenlyase, subunit F [Escherichia coli O55:H7 str. CB9615] gi|293415970|ref|ZP_06658610.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B185] gi|300930578|ref|ZP_07145970.1| hydrogenase 4 subunit H [Escherichia coli MS 187-1] gi|301027130|ref|ZP_07190499.1| hydrogenase 4 subunit H [Escherichia coli MS 69-1] gi|307312857|ref|ZP_07592487.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309795180|ref|ZP_07689599.1| hydrogenase 4 subunit H [Escherichia coli MS 145-7] gi|312973070|ref|ZP_07787243.1| formate hydrogenlyase subunit 6 [Escherichia coli 1827-70] gi|331654197|ref|ZP_08355197.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli M718] gi|331674228|ref|ZP_08374988.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA280] gi|331684333|ref|ZP_08384925.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H299] gi|12517168|gb|AAG57827.1|AE005500_6 probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) [Escherichia coli O157:H7 str. EDL933] gi|13363047|dbj|BAB36999.1| formate hydrogenlyase subunit-7 component F [Escherichia coli O157:H7 str. Sakai] gi|73856764|gb|AAZ89471.1| probable iron-sulfur protein of hydrogenase 3 [Shigella sonnei Ss046] gi|81246616|gb|ABB67324.1| probable iron-sulfur protein of hydrogenase 3 [Shigella boydii Sb227] gi|110616201|gb|ABF04868.1| probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) [Shigella flexneri 5 str. 8401] gi|157067846|gb|ABV07101.1| formate hydrogenlyase, subunit F [Escherichia coli HS] gi|169753962|gb|ACA76661.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|187769586|gb|EDU33430.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4196] gi|188015821|gb|EDU53943.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4113] gi|188487576|gb|EDU62679.1| iron-sulfur binding domain protein [Escherichia coli 53638] gi|189003527|gb|EDU72513.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4076] gi|189357266|gb|EDU75685.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4401] gi|189362055|gb|EDU80474.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4486] gi|189366888|gb|EDU85304.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4501] gi|189372135|gb|EDU90551.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC869] gi|189377500|gb|EDU95916.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC508] gi|190903197|gb|EDV62920.1| formate hydrogenlyase, subunit F [Escherichia coli B7A] gi|192927313|gb|EDV81932.1| formate hydrogenlyase, subunit F [Escherichia coli E22] gi|194414134|gb|EDX30410.1| formate hydrogenlyase, subunit F [Escherichia coli B171] gi|194422106|gb|EDX38109.1| formate hydrogenlyase, subunit F [Escherichia coli 101-1] gi|208725710|gb|EDZ75311.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4206] gi|208734990|gb|EDZ83677.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4045] gi|208739061|gb|EDZ86743.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4042] gi|209157572|gb|ACI35005.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. EC4115] gi|209761900|gb|ACI79262.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761902|gb|ACI79263.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761904|gb|ACI79264.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|209761906|gb|ACI79265.1| formate hydrogenlyase subunit-7 component F [Escherichia coli] gi|217319402|gb|EEC27827.1| formate hydrogenlyase, subunit F [Escherichia coli O157:H7 str. TW14588] gi|218355313|emb|CAQ87920.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia fergusonii ATCC 35469] gi|222034414|emb|CAP77156.1| Formate hydrogenlyase subunit 6 [Escherichia coli LF82] gi|226839383|gb|EEH71404.1| formate hydrogenlyase [Escherichia sp. 1_1_43] gi|242378277|emb|CAQ33052.1| formate hydrogenlyase complex iron-sulfur protein, subunit of hydrogenase 3 and formate hydrogenlyase complex [Escherichia coli BL21(DE3)] gi|253323469|gb|ACT28071.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974552|gb|ACT40223.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli B str. REL606] gi|253978719|gb|ACT44389.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli BL21(DE3)] gi|254594060|gb|ACT73421.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli O157:H7 str. TW14359] gi|257760510|dbj|BAI32007.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O103:H2 str. 12009] gi|290763920|gb|ADD57881.1| Formate hydrogenlyase, subunit F [Escherichia coli O55:H7 str. CB9615] gi|291432159|gb|EFF05141.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli B185] gi|300395162|gb|EFJ78700.1| hydrogenase 4 subunit H [Escherichia coli MS 69-1] gi|300461520|gb|EFK25013.1| hydrogenase 4 subunit H [Escherichia coli MS 187-1] gi|306907292|gb|EFN37798.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|308121151|gb|EFO58413.1| hydrogenase 4 subunit H [Escherichia coli MS 145-7] gi|309703079|emb|CBJ02411.1| formate hydrogenlyase subunit 6 [Escherichia coli ETEC H10407] gi|310333012|gb|EFQ00226.1| formate hydrogenlyase subunit 6 [Escherichia coli 1827-70] gi|312947249|gb|ADR28076.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315061996|gb|ADT76323.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli W] gi|315298792|gb|EFU58046.1| hydrogenase 4 subunit H [Escherichia coli MS 16-3] gi|320173427|gb|EFW48626.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Shigella dysenteriae CDC 74-1112] gi|320186506|gb|EFW61234.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Shigella flexneri CDC 796-83] gi|320189052|gb|EFW63711.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli O157:H7 str. EC1212] gi|320640363|gb|EFX09902.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. G5101] gi|320656760|gb|EFX24648.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662303|gb|EFX29700.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320667354|gb|EFX34312.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O157:H7 str. LSU-61] gi|323159852|gb|EFZ45823.1| formate hydrogenlyase subunit 6 [Escherichia coli E128010] gi|323167105|gb|EFZ52823.1| formate hydrogenlyase subunit 6 [Shigella sonnei 53G] gi|323172992|gb|EFZ58623.1| formate hydrogenlyase subunit 6 [Escherichia coli LT-68] gi|323377421|gb|ADX49689.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli KO11] gi|323935724|gb|EGB32038.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323941449|gb|EGB37632.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323960620|gb|EGB56246.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323971551|gb|EGB66784.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] gi|324111345|gb|EGC05327.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] gi|325496239|gb|EGC94098.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia fergusonii ECD227] gi|326339208|gb|EGD63023.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli O157:H7 str. 1044] gi|326342909|gb|EGD66677.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli O157:H7 str. 1125] gi|331047579|gb|EGI19656.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli M718] gi|331068322|gb|EGI39717.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA280] gi|331077948|gb|EGI49154.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H299] gi|332091881|gb|EGI96959.1| formate hydrogenlyase subunit 6 [Shigella boydii 3594-74] gi|332344601|gb|AEE57935.1| formate hydrogenlyase subunit 6 [Escherichia coli UMNK88] Length = 180 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|325958330|ref|YP_004289796.1| glutamate synthase (NADPH) [Methanobacterium sp. AL-21] gi|325329762|gb|ADZ08824.1| Glutamate synthase (NADPH) [Methanobacterium sp. AL-21] Length = 503 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 11 LCKHT-DCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LCK+ C CP D + + E + +H + C+ C +CE CP +AI+ + P Sbjct: 33 LCKNCYSCFNNCPHDVYEIIDDEPY-PLHHENCVGCRICEEMCPNNAIEVNAVP 85 >gi|197283983|ref|YP_002149855.1| hypothetical protein PMI0070 [Proteus mirabilis HI4320] gi|227358148|ref|ZP_03842489.1| oxidoreductase, Fe-S subunit [Proteus mirabilis ATCC 29906] gi|194681470|emb|CAR40309.1| putative oxidoreductase, Fe-S subunit [Proteus mirabilis HI4320] gi|227161484|gb|EEI46521.1| oxidoreductase, Fe-S subunit [Proteus mirabilis ATCC 29906] Length = 209 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP--VDAIKPDTE 60 T+ C CK +C+ VCPV E F + + CI C C CP + + P T+ Sbjct: 121 TDTCRQCKTPECMNVCPVKAIRYQEEFGCIVVDTRRCIGCAACTTACPWMMATVNPQTK 179 >gi|82703818|ref|YP_413384.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosospira multiformis ATCC 25196] gi|82411883|gb|ABB75992.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosospira multiformis ATCC 25196] Length = 259 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C T C++VCPVD + EC C +C CPVD I+ Sbjct: 84 QACIGC--TVCIQVCPVDAIVGAARQMHTVISGECTGCSLCLEPCPVDCIQ 132 >gi|331000171|ref|ZP_08323861.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] gi|329572656|gb|EGG54291.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] Length = 194 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 Y V C C CV+VCP + E + + I +CI CG C CP A Sbjct: 61 YYVPVGCNECADPACVKVCPTKAHFKRESDGLVLIDEKKCIGCGACAQACPYGA 114 >gi|330834494|ref|YP_004409222.1| putative pyruvate: ferredoxin oxidoreductase, alpha- and delta subunit [Metallosphaera cuprina Ar-4] gi|329566633|gb|AEB94738.1| putative pyruvate: ferredoxin oxidoreductase, alpha- and delta subunit [Metallosphaera cuprina Ar-4] Length = 605 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Query: 4 VVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V +E C C T C + CP E + + I+ +ECI CG C P CP AI + E Sbjct: 539 VDSERCTGC--TICYDHFTCPAILKLENKKAV-INQNECIGCGACVPVCPYKAITLEGE 594 >gi|325830275|ref|ZP_08163732.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325487742|gb|EGC90180.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 398 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI ++ + CVE C L + P+ CI CG C CP AI+ Sbjct: 24 ERCISVRNRNADCLRCVEACTSGALAYRAGELLVEPERCIGCGTCATACPTCAIE 78 >gi|323699800|ref|ZP_08111712.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323459732|gb|EGB15597.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 370 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +NC C+ C+ C Y E +A++P++C+ CG C C ++ + G++ Sbjct: 193 DNCQACEA--CLRACKTGALYIDETTGKIALNPEKCVGCGGCFVACRHGGLQVNWAVGVQ 250 Query: 65 LWLKINSEYA 74 +L+ EYA Sbjct: 251 DFLERMMEYA 260 >gi|257790250|ref|YP_003180856.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317489711|ref|ZP_07948214.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|257474147|gb|ACV54467.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316911177|gb|EFV32783.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 398 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI ++ + CVE C L + P+ CI CG C CP AI+ Sbjct: 24 ERCISVRNRNADCLRCVEACTSGALAYRAGELLVEPERCIGCGTCATACPTCAIE 78 >gi|218885423|ref|YP_002434744.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756377|gb|ACL07276.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 169 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECP 51 C C+ +CV+VCP E + + + D+CI CG C CP Sbjct: 60 CFHCEQPECVDVCPTGAMTKREADGIVYVEADDCIGCGACLEACP 104 >gi|198275773|ref|ZP_03208304.1| hypothetical protein BACPLE_01948 [Bacteroides plebeius DSM 17135] gi|198271402|gb|EDY95672.1| hypothetical protein BACPLE_01948 [Bacteroides plebeius DSM 17135] Length = 321 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 10/90 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--------KPDTE 60 CI C CV+VCP + N I P +C C CE ECP AI KP E Sbjct: 221 CIGCGK--CVKVCPFEAITLENNLAYIDPAKCKSCRKCEMECPQQAIVAVNFPPRKPKAE 278 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSA 90 + A K E++ SA Sbjct: 279 APAAEKTAVEKTVAASPKTEAVKNETVTSA 308 >gi|119897457|ref|YP_932670.1| iron-sulfur bindinding oxidase [Azoarcus sp. BH72] gi|119669870|emb|CAL93783.1| conserved hypothetical iron-sulfur bindinding oxidase [Azoarcus sp. BH72] Length = 925 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 10/14 (71%), Positives = 12/14 (85%) Query: 38 DECIDCGVCEPECP 51 D CI+CG CEP+CP Sbjct: 538 DRCIECGFCEPQCP 551 >gi|86359334|ref|YP_471226.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] gi|115502513|sp|Q2K3T7|NUOI2_RHIEC RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|86283436|gb|ABC92499.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] Length = 188 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 67 KCVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|260576927|ref|ZP_05844909.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259020863|gb|EEW24177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 544 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 NC C C VCP + + G F I+ D C CG+C ECP AI Sbjct: 490 NCFECD--TCYGVCPDNAVIKLGSGMGF-TINLDYCKGCGICAAECPCGAI 537 >gi|218701212|ref|YP_002408841.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli IAI39] gi|218371198|emb|CAR19029.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli IAI39] Length = 180 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|209880614|ref|XP_002141746.1| RNase L inhibitor-like protein [Cryptosporidium muris RN66] gi|209557352|gb|EEA07397.1| RNase L inhibitor-like protein, putative [Cryptosporidium muris RN66] Length = 618 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 11/59 (18%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----------CIDCGVCEPECPVDAI 55 N +CK +C + C C L + D CI CG+C +CP DAI Sbjct: 25 NADMCKPKNCSQECKTFCPVVRTGKLCVEVDSTSKVATISESLCIGCGICVKKCPYDAI 83 >gi|183985165|ref|YP_001853456.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium marinum M] gi|183178491|gb|ACC43601.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium marinum M] Length = 296 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 113 MSSDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVIE 166 >gi|167625926|ref|YP_001676220.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355948|gb|ABZ78561.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 182 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ +C+ C + C+ VCP + + + + D+C CG+C CP DA+ Sbjct: 57 LSHSCMHCGNPGCLMVCPSQAYSVRDDGLVVLDRDKCTGCGLCVNACPYDAV 108 >gi|297620127|ref|YP_003708232.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297379104|gb|ADI37259.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 253 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + C+ C+ C+E CPVD + +N I P++CI C +C CPV AI Sbjct: 43 YIQPKKCVHCEL--CLEACPVDAIEKPNLKNSAKIIPEKCIKCEICAKTCPVGAI 95 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 5/53 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T+ CI C C ++CPV Y+G+ + I ++C+ CG+CE CPV AI Sbjct: 199 VETDKCIDC--MVCHDLCPVSAITYDGK--IIIDNEKCVHCGICEKNCPVSAI 247 >gi|153952957|ref|YP_001393722.1| hypothetical protein CKL_0320 [Clostridium kluyveri DSM 555] gi|219853615|ref|YP_002470737.1| hypothetical protein CKR_0272 [Clostridium kluyveri NBRC 12016] gi|146345838|gb|EDK32374.1| Conserved hypothetical protein containing a ferredoxin domain [Clostridium kluyveri DSM 555] gi|219567339|dbj|BAH05323.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 253 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWL 67 D CI CG+CE +CPV+AIK G +W+ Sbjct: 188 DSCIGCGLCEKKCPVEAIK--MRNGKPVWI 215 >gi|114775434|ref|ZP_01451002.1| hypothetical protein SPV1_03878 [Mariprofundus ferrooxydans PV-1] gi|114553545|gb|EAU55926.1| hypothetical protein SPV1_03878 [Mariprofundus ferrooxydans PV-1] Length = 357 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C C CVE CP + + L PD C C C CP DA+ ++ PG+ Sbjct: 275 SCTACNQ--CVEQCPTEALGIREFGANKILEFQPDACTGCRQCVNTCPEDAL--ESLPGI 330 Query: 64 EL 65 L Sbjct: 331 SL 332 >gi|118359716|ref|XP_001013096.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Tetrahymena thermophila] gi|89294863|gb|EAR92851.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Tetrahymena thermophila SB210] Length = 324 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 18 VEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +C+ CP AI +TEP Sbjct: 199 FEKGPLSPLFRGEHALRRYPTGEERCIACKLCQSACPARAITIETEP 245 >gi|85374152|ref|YP_458214.1| NADH dehydrogenase subunit I [Erythrobacter litoralis HTCC2594] gi|123409621|sp|Q2NA74|NUOI_ERYLH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|84787235|gb|ABC63417.1| NADH dehydrogenase I, I subunit [Erythrobacter litoralis HTCC2594] Length = 162 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIESEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 118 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EY+T+ T++E L AK+ K+E+ + N Sbjct: 119 EGP----------NFEYSTE-----TREELLYDKAKLLANGDKWERAIAAN 154 >gi|89092446|ref|ZP_01165400.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oceanospirillum sp. MED92] gi|89083534|gb|EAR62752.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oceanospirillum sp. MED92] Length = 82 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/23 (69%), Positives = 18/23 (78%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP +AI P E Sbjct: 7 DECINCDVCEPECPNEAISPGDE 29 >gi|194432977|ref|ZP_03065260.1| formate hydrogenlyase, subunit F [Shigella dysenteriae 1012] gi|194418704|gb|EDX34790.1| formate hydrogenlyase, subunit F [Shigella dysenteriae 1012] gi|320180857|gb|EFW55780.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Shigella boydii ATCC 9905] gi|332088651|gb|EGI93764.1| formate hydrogenlyase subunit 6 [Shigella dysenteriae 155-74] Length = 180 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|315923839|ref|ZP_07920068.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622872|gb|EFV02824.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 206 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + CI C C +CP G + AI C+ CG+C CPVDAI Sbjct: 151 FKIVDGCIGCDT--CAGLCPQQAIDAGTPY-AIRQANCLHCGLCFENCPVDAI 200 >gi|240102884|ref|YP_002959193.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] gi|239910438|gb|ACS33329.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] Length = 174 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 10 ILCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 I CKH D C+ VCP Y E+ + IH D+CI C C CP Sbjct: 46 INCKHCDDAPCLRVCPTHAIYRDEDGAVRIHEDKCIGCLACLQVCP 91 >gi|282600017|ref|ZP_05972741.2| hydrogenase-4 component A [Providencia rustigianii DSM 4541] gi|282566781|gb|EFB72316.1| hydrogenase-4 component A [Providencia rustigianii DSM 4541] Length = 187 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+ D C VCPV+ + + ++ CI C +C CP AI P Sbjct: 31 MLCRQCDDAPCARVCPVNAITHENDMIVLNESLCIGCKLCGLVCPFGAITP 81 >gi|261368062|ref|ZP_05980945.1| iron-sulfur cluster-binding protein [Subdoligranulum variabile DSM 15176] gi|282570052|gb|EFB75587.1| iron-sulfur cluster-binding protein [Subdoligranulum variabile DSM 15176] Length = 368 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV E C+ C CV++C D + + +I ++C+ CG C CP DA++ Sbjct: 191 YVKQELCVGCGR--CVKICAHDAPHIVDRKSSIDQNKCVGCGRCIGVCPTDAVR 242 >gi|197103275|ref|YP_002128653.1| NADPH-dependent glutamate synthase beta chain [Phenylobacterium zucineum HLK1] gi|196480551|gb|ACG80078.1| NADPH-dependent glutamate synthase beta chain [Phenylobacterium zucineum HLK1] Length = 546 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Query: 8 NCILCKHTDCVEVCP---VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 NC C C CP ++ G + ++ D C C VC CP AI+ EPG Sbjct: 490 NCFECDQ--CYAACPEQAIEKLGPGRRYRYLY-DRCTGCAVCFETCPCHAIEMIQEPG 544 >gi|170743890|ref|YP_001772545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168198164|gb|ACA20111.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 947 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + CI CE CP Sbjct: 769 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCIGTRFCEANCP 812 >gi|121534272|ref|ZP_01666096.1| electron transfer flavoprotein, alpha subunit [Thermosinus carboxydivorans Nor1] gi|121307042|gb|EAX47960.1| electron transfer flavoprotein, alpha subunit [Thermosinus carboxydivorans Nor1] Length = 399 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + C+ C CV CP + A + C CG C CPV AI + E Sbjct: 5 VIKDQCVSCGA--CVSTCPFGAIIMESDNKAFITEACTACGACIDACPVGAIIREEE 59 >gi|86748604|ref|YP_485100.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86571632|gb|ABD06189.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 77 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%) Query: 15 TDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T CV+VCP+D G+ F+A DEC C CE +CP DA+K Sbjct: 26 TVCVDVCPLDVLRISDLTGKAFMAY--DECWYCMPCEADCPTDAVK 69 >gi|33602759|ref|NP_890319.1| ferredoxin [Bordetella bronchiseptica RB50] gi|33577201|emb|CAE35758.1| putative ferredoxin [Bordetella bronchiseptica RB50] Length = 213 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 + V+ E +CI C T C++ CPVD + + D C C +C CPVD I D Sbjct: 78 LVAVIDEAHCIGC--TLCIKACPVDAIVGANKRMHTVLADWCTGCDLCVAPCPVDCI--D 133 Query: 59 TEPGLELW 66 P +W Sbjct: 134 MRPAARVW 141 >gi|93005680|ref|YP_580117.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter cryohalolentis K5] gi|92393358|gb|ABE74633.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter cryohalolentis K5] Length = 280 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD G++ I D C C +C CPVD I Sbjct: 123 DDCIGC--TKCIPACPVDAIVGTGKHMHTIFTDLCTGCELCIAPCPVDCI 170 >gi|332528159|ref|ZP_08404190.1| putative glutamate synthase (NADPH) small subunit [Rubrivivax benzoatilyticus JA2] gi|332112730|gb|EGJ12523.1| putative glutamate synthase (NADPH) small subunit [Rubrivivax benzoatilyticus JA2] Length = 541 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 NC+ C +C VCP + + A+ D C CG+C ECP AI Sbjct: 488 NCLQCD--NCYGVCPDNAVKKLAPGRYAVDYDYCKGCGLCAVECPCGAI 534 >gi|296133745|ref|YP_003640992.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296032323|gb|ADG83091.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 110 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 17/90 (18%) Query: 17 CVEVCPVDC-FYEGENFLAIH-PDECIDCGVCEPECPVDA---------------IKPDT 59 CV VCP D F + N A+ P +C DC C ECP A +K + Sbjct: 21 CVRVCPGDLLFKDSANRCAVRDPRDCWDCAACIKECPRQALEMYLPVQIGGRGATLKAKS 80 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPS 89 E G+ W + T+ I T+ E S Sbjct: 81 EQGVLSWFLTKPDGTTETFIIKTRTEKSQS 110 >gi|293604806|ref|ZP_06687203.1| tetrathionate reductase subunit B [Achromobacter piechaudii ATCC 43553] gi|292816634|gb|EFF75718.1| tetrathionate reductase subunit B [Achromobacter piechaudii ATCC 43553] Length = 256 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA--IKPDTE 60 LC H D CV VCPV ++ E+ + + +E C+ C C CP DA I DT+ Sbjct: 111 LCNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCAYCVQACPYDARFINHDTQ 166 >gi|167043306|gb|ABZ08011.1| putative ABC transporter [uncultured marine crenarchaeote HF4000_ANIW141M18] Length = 592 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 16 DCVEVCPV-----DCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 +C++ CPV DC E N I D C CG+C CP +AI Sbjct: 21 ECIKYCPVNKSGADCIVLNEETNKALIDEDICNGCGICVKVCPFEAI 67 >gi|194290510|ref|YP_002006417.1| 4fe-4S ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193224345|emb|CAQ70356.1| putative 4Fe-4S ferredoxin [Cupriavidus taiwanensis LMG 19424] Length = 721 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 12/57 (21%) Query: 11 LCKH--------TDCVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H T C+++C + +++G+ + + P+ C+ CG C CP AI Sbjct: 332 LCAHGRNQTTGCTACIDICSTEAIASRWHDGKGRIEVAPNLCMGCGACTTVCPSGAI 388 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T C LC CV CP + L+ C+ CG+C+ CP DA+ Sbjct: 585 VDTGKCTLC--LACVGACPSQALRDNPERPVLSFIERNCVQCGLCQKTCPEDAV 636 >gi|167746962|ref|ZP_02419089.1| hypothetical protein ANACAC_01674 [Anaerostipes caccae DSM 14662] gi|167653922|gb|EDR98051.1| hypothetical protein ANACAC_01674 [Anaerostipes caccae DSM 14662] Length = 438 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCP-------VDCFYEGENFLA---IHPDECIDCGVCEPECP 51 NCI C CV VCP + + NF A +H DEC++CG C CP Sbjct: 364 NCINCGR--CVSVCPQKLMPARLSVLADNNNFEAFEALHGDECVECGCCSFICP 415 >gi|150400949|ref|YP_001324715.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013652|gb|ABR56103.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 53 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V NC+ C +CV CPVD I D C DCG+C C +DA+K Sbjct: 3 VLSNCVGCG--ECVVFCPVDAITT-YGIAIIDKDLCTDCGICAKYCQIDALK 51 >gi|20092967|ref|NP_619042.1| formylmethanofuran dehydrogenase, subunit F [Methanosarcina acetivorans C2A] gi|19918282|gb|AAM07522.1| formylmethanofuran dehydrogenase, subunit F [Methanosarcina acetivorans C2A] Length = 346 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Query: 14 HTDCVEVCPVDCFYE-----GENFLAI--HPDECIDCGVCEPECPVDAI 55 HT CVE CP + + GE I PD CI CG C CPV+AI Sbjct: 185 HT-CVETCPTNAIFNKKAKPGEKVEKISHRPDACIYCGACAVSCPVNAI 232 >gi|193069699|ref|ZP_03050651.1| formate hydrogenlyase, subunit F [Escherichia coli E110019] gi|192957062|gb|EDV87513.1| formate hydrogenlyase, subunit F [Escherichia coli E110019] Length = 180 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|26990820|ref|NP_746245.1| NADH dehydrogenase subunit I [Pseudomonas putida KT2440] gi|148546977|ref|YP_001267079.1| NADH dehydrogenase subunit I [Pseudomonas putida F1] gi|167034694|ref|YP_001669925.1| NADH dehydrogenase subunit I [Pseudomonas putida GB-1] gi|170721050|ref|YP_001748738.1| NADH dehydrogenase subunit I [Pseudomonas putida W619] gi|81733276|sp|Q88FH0|NUOI_PSEPK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|24985827|gb|AAN69709.1|AE016607_3 NADH dehydrogenase I, I subunit [Pseudomonas putida KT2440] gi|148511035|gb|ABQ77895.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida F1] gi|166861182|gb|ABY99589.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida GB-1] gi|169759053|gb|ACA72369.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida W619] gi|313498024|gb|ADR59390.1| NuoI [Pseudomonas putida BIRD-1] Length = 182 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|333028872|ref|ZP_08456936.1| putative Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. Tu6071] gi|332748724|gb|EGJ79165.1| putative Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. Tu6071] Length = 267 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 78 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIE 129 >gi|332087441|gb|EGI92569.1| formate hydrogenlyase subunit 6 [Shigella boydii 5216-82] Length = 180 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|328869461|gb|EGG17839.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium fasciculatum] Length = 213 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 E P+ + GE+ L +P + CI C +CE CP AI + EP L+ Sbjct: 90 EKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEPRLD 138 >gi|300114447|ref|YP_003761022.1| electron transport complex RnfABCDGE type subunit B [Nitrosococcus watsonii C-113] gi|299540384|gb|ADJ28701.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus watsonii C-113] Length = 209 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 16/100 (16%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ EN CI C T C++ CPVD L + EC C +C CPVD I+ Sbjct: 106 VIDENRCIGC--TLCIQACPVDAILGAPKQLHTVITAECTGCELCVAPCPVDCIE----- 158 Query: 62 GLELWLKINSEYAT-QWPNITTKKESLPSAA--KMDGVKQ 98 + + E T +WP T LP AA + +G+ Q Sbjct: 159 ----MVPVAPEPGTWKWPFPETTHPPLPIAAQKQREGIDQ 194 >gi|269966518|ref|ZP_06180601.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 40B] gi|269828862|gb|EEZ83113.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 40B] Length = 255 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|218782798|ref|YP_002434116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764182|gb|ACL06648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 361 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 23/43 (53%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C V EG++ + P+ CI CG+C CP +AI +P Sbjct: 289 ERCQVRAIEEGDDAYRVKPEACIGCGLCVSTCPSEAISLIRKP 331 >gi|167044386|gb|ABZ09063.1| putative ABC transporter [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 592 Score = 34.3 bits (77), Expect = 5.0, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 16 DCVEVCPV-----DCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 +C++ CPV DC E N I D C CG+C CP +AI Sbjct: 21 ECIKYCPVNKSGADCIVLNEETNKALIDEDICNGCGICVKVCPFEAI 67 >gi|126438164|ref|YP_001073855.1| formate dehydrogenase beta subunit [Mycobacterium sp. JLS] gi|126237964|gb|ABO01365.1| formate dehydrogenase beta subunit [Mycobacterium sp. JLS] Length = 300 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 121 SDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 172 >gi|108802182|ref|YP_642379.1| formate dehydrogenase beta subunit [Mycobacterium sp. MCS] gi|119871335|ref|YP_941287.1| formate dehydrogenase beta subunit [Mycobacterium sp. KMS] gi|108772601|gb|ABG11323.1| formate dehydrogenase beta subunit [Mycobacterium sp. MCS] gi|119697424|gb|ABL94497.1| formate dehydrogenase beta subunit [Mycobacterium sp. KMS] Length = 300 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 121 SDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 172 >gi|28210901|ref|NP_781845.1| anaerobic sulfite reductase subunit C [Clostridium tetani E88] gi|28203340|gb|AAO35782.1| anaerobic sulfite reductase subunit C [Clostridium tetani E88] Length = 295 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV ENC+ CK EVC + + + I D+C +CG+C +C + ++ E G+ Sbjct: 173 VVEENCVGCKICSVEEVCKIKACKAEDGKIKIDFDKCNNCGLCIDKCHFNGVELHKE-GV 231 Query: 64 ELWL 67 ++++ Sbjct: 232 KVFV 235 >gi|57642010|ref|YP_184488.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] gi|57160334|dbj|BAD86264.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] Length = 168 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECP 51 NC C+ C++VCP Y + + + I+P++CI C +C CP Sbjct: 47 NCRHCEKAPCMDVCPAGAIYRDSDGAVIINPNKCIGCLMCLAACP 91 >gi|320352571|ref|YP_004193910.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121073|gb|ADW16619.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 95 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CI C +C VCP F EGE D C++CG C CPV A+ PG+ Sbjct: 18 DRCIGCG--NCTVVCPHRIFALEGEKLKVGDRDLCMECGACARNCPVQALT--VTPGVGC 73 Query: 66 WLKINSEYATQWPNITTKKESLPS 89 + I + W N ++ L Sbjct: 74 AVAILA----AWINRLLGRKLLSG 93 >gi|260778692|ref|ZP_05887584.1| iron-sulfur cluster-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604856|gb|EEX31151.1| iron-sulfur cluster-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 553 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECPVDAI 55 +++C LC CV VCP + +G++ L +C+ CG+C CP +A+ Sbjct: 417 SKDCTLC--MSCVAVCPSRALHTDGQSPSLKFVEQDCVQCGLCTKACPENAL 466 >gi|289829692|ref|ZP_06547233.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 132 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 10 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 67 Query: 57 --PDTEPG 62 PD E G Sbjct: 68 LTPDFELG 75 >gi|150390845|ref|YP_001320894.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149950707|gb|ABR49235.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 582 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 ++ E CI C C+ C +D EN A I ++CI CGVC CPV+A+ Sbjct: 529 ILEEKCINCGL--CLRKCRLDAIIR-ENHGAHRIQTEKCIQCGVCLDACPVNAV 579 >gi|332701478|ref|ZP_08421566.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332551627|gb|EGJ48671.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 150 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 C+ C CV CP F + + + + CI CG C CPVDA+ D Sbjct: 54 CLACDPAPCVLACPTGAFSQRRGGGVVVKRELCIQCGKCAEACPVDAVYLDA 105 >gi|317490085|ref|ZP_07948574.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833846|ref|ZP_08166196.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] gi|316910790|gb|EFV32410.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485204|gb|EGC87676.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] Length = 219 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECP 51 ++ ++ +C+ C+ C+ VCP + + ++PD CI C C CP Sbjct: 96 SFFISTSCMHCEEPSCMRVCPAGAISKDAHGIVKVNPDVCIGCKYCFQACP 146 >gi|317471774|ref|ZP_07931113.1| electron transport complex [Anaerostipes sp. 3_2_56FAA] gi|316900751|gb|EFV22726.1| electron transport complex [Anaerostipes sp. 3_2_56FAA] Length = 438 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCP-------VDCFYEGENFLA---IHPDECIDCGVCEPECP 51 NCI C CV VCP + + NF A +H DEC++CG C CP Sbjct: 364 NCINCGR--CVSVCPQKLMPARLSVLADNNNFEAFEALHGDECVECGCCSFICP 415 >gi|325104451|ref|YP_004274105.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pedobacter saltans DSM 12145] gi|324973299|gb|ADY52283.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pedobacter saltans DSM 12145] Length = 117 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 15/24 (62%), Positives = 18/24 (75%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 DECI+CG CEPECP +AI +P Sbjct: 7 DECINCGACEPECPNNAIYDAGQP 30 >gi|309811972|ref|ZP_07705738.1| formate dehydrogenase-N subunit beta [Dermacoccus sp. Ellin185] gi|308434030|gb|EFP57896.1| formate dehydrogenase-N subunit beta [Dermacoccus sp. Ellin185] Length = 408 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 + ++ C C H C++ CP + E + + D C CG C CP I+ Sbjct: 220 MASDVCKHCTHAGCLDNCPTGALFRTEFGTVVVQADVCNGCGYCVGGCPFGVIE 273 >gi|297527527|ref|YP_003669551.1| ABC transporter related protein [Staphylothermus hellenicus DSM 12710] gi|297256443|gb|ADI32652.1| ABC transporter related protein [Staphylothermus hellenicus DSM 12710] Length = 601 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 6/43 (13%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 KH +E+ P +G++ + I+ D CI CG+C +CP +AI Sbjct: 31 KHKKAIELSP-----DGKHAV-IYEDICIGCGICVKKCPFNAI 67 >gi|256810830|ref|YP_003128199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256794030|gb|ACV24699.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 152 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + ++ + + D+CI CG+C CP AI+ D Sbjct: 47 CMHCDKNPCLYACPENAIERIDDKVVVIKDKCIGCGLCAIACPFGAIRID 96 >gi|257783995|ref|YP_003179212.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Atopobium parvulum DSM 20469] gi|257472502|gb|ACV50621.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Atopobium parvulum DSM 20469] Length = 461 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C++VCP +C + I + C+ CG+C CP + Sbjct: 76 CLDVCPANCIDIHNQSVRIDDEACLQCGLCVAACPTE 112 >gi|163751796|ref|ZP_02159013.1| electron transport complex protein RnfB [Shewanella benthica KT99] gi|161328360|gb|EDP99520.1| electron transport complex protein RnfB [Shewanella benthica KT99] Length = 189 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAILGTGKLMHTVITDYCTGCDLCVEPCPVDCI 159 >gi|197121285|ref|YP_002133236.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196171134|gb|ACG72107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 310 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++++ C C+ C+E CP E + I PD C CG C CP + + G Sbjct: 125 MMSDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVVDRREDDG 184 >gi|219850506|ref|YP_002464939.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219544765|gb|ACL26503.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 318 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C+ C + C VCPV Y E+ +A+ ++CI C C CP A Sbjct: 154 CMQCDNPPCTSVCPVSATYTNEHGVVAVDYEQCIGCRACIAACPYGA 200 >gi|119720314|ref|YP_920809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525434|gb|ABL78806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 286 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECP 51 C+ C C CPV E + I +ECI CG CE CP Sbjct: 94 QCMHCATAPCSRACPVGAIKVTPEGAVVISKEECIGCGFCETACP 138 >gi|152985330|ref|YP_001350814.1| oxidoreductase FAD-binding region [Pseudomonas aeruginosa PA7] gi|150960488|gb|ABR82513.1| oxidoreductase, FAD-binding [Pseudomonas aeruginosa PA7] Length = 941 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVIWRDIQAK 572 >gi|83310159|ref|YP_420423.1| ferredoxin [Magnetospirillum magneticum AMB-1] gi|82945000|dbj|BAE49864.1| Ferredoxin [Magnetospirillum magneticum AMB-1] Length = 99 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C + CP + +GE I P+ C +C C CPVD Sbjct: 1 MALLITDQCINCDV--CEQECPNEAITQGEEIFVIDPNRCTECVGHYDYPQCIEHCPVDC 58 Query: 55 I--KPDTEPGL-ELWLKINSEYA 74 I PD GL EL +K A Sbjct: 59 IIVDPDRVEGLDELQVKYRDLMA 81 >gi|327191030|gb|EGE58084.1| putative NADH-ubiquinone oxidoreductase protein [Rhizobium etli CNPAF512] Length = 188 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 67 KCVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|306819722|ref|ZP_07453382.1| iron-sulfur cluster-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552220|gb|EFM40151.1| iron-sulfur cluster-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 288 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIK 56 CI+C CV VCPV+ F ++ + + P CI C C CP A+K Sbjct: 214 CIVC--GQCVSVCPVNMFVNLDSKVQMVRDPKHCILCAECYHHCPAKAVK 261 >gi|254786925|ref|YP_003074354.1| electron transport complex, RnfABCDGE type, B subunit [Teredinibacter turnerae T7901] gi|237685549|gb|ACR12813.1| electron transport complex, RnfABCDGE type, B subunit [Teredinibacter turnerae T7901] Length = 200 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD- 58 + ++ + CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 114 VAFIREDECIGC--TKCIQACPVDAILGAAKQMHTVIGSECTGCDLCVEPCPVDCIEMRP 171 Query: 59 TEPGLELW 66 + GL W Sbjct: 172 VQQGLAEW 179 >gi|283796610|ref|ZP_06345763.1| Fe-hydrogenase large subunit family protein [Clostridium sp. M62/1] gi|291076031|gb|EFE13395.1| Fe-hydrogenase large subunit family protein [Clostridium sp. M62/1] Length = 507 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 13/105 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT------- 59 N I+ + C C +D + N A I D+C+ CG C CP AI + Sbjct: 167 NAIIVQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQCLVNCPFGAIADKSQIFQVIR 226 Query: 60 --EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ + + Q+ P +T K L +A K G +E Sbjct: 227 AIQSGERVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|160939954|ref|ZP_02087300.1| hypothetical protein CLOBOL_04844 [Clostridium bolteae ATCC BAA-613] gi|158437098|gb|EDP14864.1| hypothetical protein CLOBOL_04844 [Clostridium bolteae ATCC BAA-613] Length = 427 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGEN---FLAIHPDECIDCGVCEPECPVDAI 55 + + C+ C C + CPV EGEN + D C+ CGVC+ C V AI Sbjct: 290 ITGDQCVGCGK--CAKTCPVLAISMEEGENGRKRAVVDKDICLGCGVCDRNCGVKAI 344 >gi|104782528|ref|YP_609026.1| NADH dehydrogenase subunit I [Pseudomonas entomophila L48] gi|123255480|sp|Q1I7Z3|NUOI_PSEE4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|95111515|emb|CAK16235.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Pseudomonas entomophila L48] Length = 182 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 --PDTE 60 PD E Sbjct: 118 LTPDFE 123 >gi|23014022|ref|ZP_00053863.1| COG1145: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 17 CVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C CP E L+ P CIDCG+C CP A+ D G Sbjct: 263 CAAHCPTQALQSWVGEAAEGLSFDPRSCIDCGLCVSACPGSALSFDRSAG 312 >gi|317133525|ref|YP_004092839.1| NADH dehydrogenase (quinone) [Ethanoligenens harbinense YUAN-3] gi|315471504|gb|ADU28108.1| NADH dehydrogenase (quinone) [Ethanoligenens harbinense YUAN-3] Length = 624 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C + C +CPV E + I +CI CG C CP AIK Sbjct: 574 EACKGC--SKCSRICPVGAISGEIRHPFTIDTQKCIKCGACIANCPFHAIK 622 >gi|303257325|ref|ZP_07343339.1| dimethylsulfoxide reductase, chain B [Burkholderiales bacterium 1_1_47] gi|302860816|gb|EFL83893.1| dimethylsulfoxide reductase, chain B [Burkholderiales bacterium 1_1_47] Length = 201 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECP 51 Y V+ C C CV+VCP ++ + + I +CI CG+C CP Sbjct: 61 YYVSLGCNHCSDPACVKVCPTKAHHKRAEDGLVVIDATKCIGCGLCAQACP 111 >gi|188588162|ref|YP_001921431.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43] gi|188498443|gb|ACD51579.1| hydrogenase [Clostridium botulinum E3 str. Alaska E43] Length = 565 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 18/69 (26%) Query: 9 CILCKHTDCVEVC-------PVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDA 54 CILC DCV +C +D Y G N + + +C++CG C CP A Sbjct: 146 CILC--GDCVRMCNEIQNVGAIDFAYRGSNMIVSPAFGKCLGETDCVNCGQCANVCPTGA 203 Query: 55 I--KPDTEP 61 I K D +P Sbjct: 204 IVVKSDVKP 212 >gi|149378171|ref|ZP_01895888.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter algicola DG893] gi|149357533|gb|EDM46038.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter algicola DG893] Length = 192 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + + + CI C T C++ CPVD + + EC C +C CPVD I T Sbjct: 108 VAVIREDECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVEPCPVDCIDMIT 165 Query: 60 -EPGLELW 66 EP + W Sbjct: 166 IEPDIRSW 173 >gi|121607727|ref|YP_995534.1| FAD/NAD(P)-binding oxidoreductase subunit [Verminephrobacter eiseniae EF01-2] gi|121552367|gb|ABM56516.1| benzoyl-CoA oxygenase, component A [Verminephrobacter eiseniae EF01-2] Length = 424 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ E+ + + C C C P CP AI Sbjct: 18 EICIRC--NTCEATCPVNAITHDEHNYVVRAELCNACLACIPPCPTGAI 64 >gi|312878987|ref|ZP_07738787.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] gi|310782278|gb|EFQ22676.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] Length = 597 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C VCPV+ E + I ++C+ CG C CPV AI Sbjct: 548 KCIGC--TKCARVCPVNAITGEIKKPHVIDAEKCVKCGACAEACPVKAI 594 >gi|297559006|ref|YP_003677980.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843454|gb|ADH65474.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 294 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++ C C C++VCP + E + + D C CG C P CP I E G Sbjct: 115 SDVCKHCTSAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDKREEDG-R 173 Query: 65 LW 66 +W Sbjct: 174 VW 175 >gi|240102324|ref|YP_002958632.1| 2-ketoisovalerate ferredoxin oxidoreductase subunit delta [Thermococcus gammatolerans EJ3] gi|239909877|gb|ACS32768.1| Ketoisovalerate oxidoreductase subunit vorD (vorD) [Thermococcus gammatolerans EJ3] Length = 105 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ E C+ C C + CP Y E+ ++ I D C CG+C ECP +AI + E Sbjct: 48 IIEEKCVKCYI--CWKFCPEPAIYIREDGYVGIDYDYCKGCGICANECPTNAITMEKE 103 >gi|254471603|ref|ZP_05085005.1| nitrate reductase beta chain [Pseudovibrio sp. JE062] gi|211959749|gb|EEA94947.1| nitrate reductase beta chain [Pseudovibrio sp. JE062] Length = 239 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D C+ VCPV+ F E + + ++C+ CG C CP +A Sbjct: 87 LCNHCDEPPCIPVCPVNATFKTDEGAVVVDAEQCVACGYCVQACPYEA 134 >gi|218778023|ref|YP_002429341.1| glycyl-radical enzyme activating protein family [Desulfatibacillum alkenivorans AK-01] gi|218759407|gb|ACL01873.1| Pyruvate formate lyase activating enzyme [Desulfatibacillum alkenivorans AK-01] Length = 317 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C+ CVEVCP + + + I C CG C ECP A++ Sbjct: 50 IGSRCIGCR--SCVEVCPHNALELTQEGMQIDRGLCEGCGRCADECPSTAME 99 >gi|159905591|ref|YP_001549253.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887084|gb|ABX02021.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 252 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 NC++C E+CPV + + + +CI CG CE CPV AI Sbjct: 203 NCMVCS-----EICPVGAIVYEDGLMKLDDKKCIFCGKCEKNCPVTAI 245 >gi|56412592|ref|YP_149667.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361527|ref|YP_002141163.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126849|gb|AAV76355.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093003|emb|CAR58436.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 209 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C C + CP ++ G+ + + D+C+ CG C CP DA Sbjct: 70 FAYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYDA 125 >gi|73669074|ref|YP_305089.1| formate dehydrogenase subunit beta (F420) [Methanosarcina barkeri str. Fusaro] gi|72396236|gb|AAZ70509.1| formate dehydrogenase, beta subunit (F420) [Methanosarcina barkeri str. Fusaro] Length = 401 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 19/65 (29%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF----------LAIHP-------DECIDCGVCEP 48 T CI C C+EVCP + +F A H D CI+CG CE Sbjct: 288 TSRCIKC--YTCIEVCPALSGTKVSDFTITPGKVPPSFAFHALRYSLVADSCINCGQCEE 345 Query: 49 ECPVD 53 CP+D Sbjct: 346 LCPMD 350 >gi|330834249|ref|YP_004408977.1| NADH dehydrogenase subunit I [Metallosphaera cuprina Ar-4] gi|329566388|gb|AEB94493.1| NADH dehydrogenase subunit I [Metallosphaera cuprina Ar-4] Length = 169 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + + CI C T C VCP D +G+ +I+ C+ C C CPVDA+K Sbjct: 57 MIRLYKDVCIGC--TLCAMVCPADAMKMVTEQGKKLPSINYGRCVFCAFCVDICPVDALK 114 >gi|325261134|ref|ZP_08127872.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Clostridium sp. D5] gi|324032588|gb|EGB93865.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Clostridium sp. D5] Length = 860 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 E C C VE CP+ + + I D+C CG C +CP I+ T Sbjct: 715 EKCRGCGTCQVVEGCPIKIAELADGKILIDDDKCNHCGRCVGKCPFKVIEKYT 767 >gi|320450082|ref|YP_004202178.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermus scotoductus SA-01] gi|320150251|gb|ADW21629.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermus scotoductus SA-01] Length = 258 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + +C+ C H CV CP E + + CI C C CP +A+ D G+ Sbjct: 74 IRGSCMHCTHAPCVASCPTGAMAHREGGVVTVDEKTCIGCRSCVQACPYEAVHFDEARGV 133 >gi|312880839|ref|ZP_07740639.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] gi|310784130|gb|EFQ24528.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] Length = 57 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C+ CV VCP + ++ D C++CG C CPV AI Sbjct: 9 DTCVGCEA--CVGVCPTSAISMEDGKAQVNADTCVECGACVATCPVSAIS 56 >gi|291280198|ref|YP_003497033.1| periplasmic nitrate reductase NapG [Deferribacter desulfuricans SSM1] gi|290754900|dbj|BAI81277.1| periplasmic nitrate reductase NapG [Deferribacter desulfuricans SSM1] Length = 253 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 27/123 (21%) Query: 5 VTENCILCKHTDCVEVCPV-DCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP- 61 VTE +LC C + CP+ D E+F L + DEC+ CGVC +CP + P Sbjct: 127 VTEEGLLCSF--CYDSCPLRDRAIVMEHFILPVITDECVGCGVCTEKCPTTPKSVNIIPK 184 Query: 62 GLE---------LWLKINS---------EYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E L+IN+ EY + + KKE++ S GVK +++ Sbjct: 185 GMEQKELAGFYYRKLRINAQKKSSKIKEEYENKTESEVKKKENISSF----GVKPEFKNN 240 Query: 104 FSP 106 F P Sbjct: 241 FEP 243 >gi|160900868|ref|YP_001566450.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160366452|gb|ABX38065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Delftia acidovorans SPH-1] Length = 87 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|42526786|ref|NP_971884.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] gi|41817101|gb|AAS11795.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] Length = 493 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++T C C C+ CP I ++CI+CG+C CP A+ Sbjct: 112 YMITNACQACVARPCMMNCPKTAIAISGGRARIDEEKCINCGICLKNCPYHAV 164 >gi|71065390|ref|YP_264117.1| putative electron transport complex, RnfABCDGE type, B subunit [Psychrobacter arcticus 273-4] gi|71038375|gb|AAZ18683.1| putative electron transport complex, RnfABCDGE type, B subunit [Psychrobacter arcticus 273-4] Length = 280 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD G++ I D C C +C CPVD I Sbjct: 123 DDCIGC--TKCIPACPVDAIVGTGKHMHTIFTDLCTGCELCIAPCPVDCI 170 >gi|317485161|ref|ZP_07944043.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923696|gb|EFV44900.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 70 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 E+C+ C CV++CP+D EG+ I + ++C C +C CP AI DTE G Sbjct: 8 AESCVNCGK--CVKICPLDVLREGKTTPEIVYREDCQSCFLCIIYCPKHAITVDTERG 63 >gi|294495923|ref|YP_003542416.1| formylmethanofuran dehydrogenase, subunit F [Methanohalophilus mahii DSM 5219] gi|292666922|gb|ADE36771.1| formylmethanofuran dehydrogenase, subunit F [Methanohalophilus mahii DSM 5219] Length = 341 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 7/46 (15%) Query: 17 CVEVCPVDCFYE-----GENF--LAIHPDECIDCGVCEPECPVDAI 55 CV+VCP + + GE +A PD CI CG C CPV AI Sbjct: 182 CVDVCPCNALFNPDWEAGERVDKVAQRPDACIYCGACAVSCPVQAI 227 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-----------ENFLAIHPDECIDCGVCEPECPVD 53 + E CI C CV VCP + G + FL I P+ CI CG+C CP Sbjct: 17 IPEKCIGCGT--CVMVCPKETLVIGSVGPVARGLIDKEFLEIRPNTCITCGMCSKVCPTG 74 Query: 54 AI--KPDTEPGLELWLKINS 71 A+ + D +P E IN+ Sbjct: 75 ALEMREDGKPVEEKTYLINA 94 >gi|269961739|ref|ZP_06176099.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833522|gb|EEZ87621.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 255 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|262171465|ref|ZP_06039143.1| iron-sulfur cluster-binding protein [Vibrio mimicus MB-451] gi|261892541|gb|EEY38527.1| iron-sulfur cluster-binding protein [Vibrio mimicus MB-451] Length = 553 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|258622882|ref|ZP_05717898.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM573] gi|258584821|gb|EEW09554.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM573] Length = 553 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|257051788|ref|YP_003129621.1| NADH-quinone oxidoreductase, chain I [Halorhabdus utahensis DSM 12940] gi|256690551|gb|ACV10888.1| NADH-quinone oxidoreductase, chain I [Halorhabdus utahensis DSM 12940] Length = 153 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP D GE + +H +CI C +CE CP DAI Sbjct: 45 ERCIWCRQ--CENVCPNDTIQIVMDDQRNGEQY-NLHVGQCIYCRLCEEVCPTDAI 97 >gi|224418322|ref|ZP_03656328.1| putative ferredoxin [Helicobacter canadensis MIT 98-5491] gi|253827643|ref|ZP_04870528.1| putative ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313141851|ref|ZP_07804044.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511049|gb|EES89708.1| putative ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313130882|gb|EFR48499.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 512 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 13 KH-TDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP--GLE 64 KH T CV+ CP +N L P +CI CG C CP +++ + P GLE Sbjct: 170 KHCTKCVDACPTFGVGANDNLMELVFSPVDCIACGACVGVCPTSSLEYEELPKEGLE 226 >gi|220932674|ref|YP_002509582.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] gi|219993984|gb|ACL70587.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] Length = 287 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-TEPG 62 V E C C+ CV+ C + + L + P+ C CG C+ CP AIK + E G Sbjct: 62 VDNEKCTGCRK--CVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVG 119 Query: 63 LELWLKINSE-YATQWPNITTKKESLPSAAKM 93 KIN Y Q T +++++P K+ Sbjct: 120 KLREFKINDNLYFFQGELNTGEEQAVPVIEKL 151 >gi|149189646|ref|ZP_01867928.1| tetrathionate reductase, subunit B [Vibrio shilonii AK1] gi|148836458|gb|EDL53413.1| tetrathionate reductase, subunit B [Vibrio shilonii AK1] Length = 255 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA--IKPDT 59 LC H D CV VCPV ++ E+ + + C+ C C CP DA I DT Sbjct: 108 LCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINEDT 162 >gi|126460103|ref|YP_001056381.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249824|gb|ABO08915.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 264 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 C C C VCPVD E + I D+CI CG C CP Sbjct: 74 RCFHCYSAVCALVCPVDAHIVTEYGAVVIQTDKCIGCGRCAAVCP 118 >gi|262402197|ref|ZP_06078758.1| iron-sulfur cluster-binding protein [Vibrio sp. RC586] gi|297579085|ref|ZP_06941013.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC385] gi|262350979|gb|EEZ00112.1| iron-sulfur cluster-binding protein [Vibrio sp. RC586] gi|297536679|gb|EFH75512.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC385] Length = 553 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|325833428|ref|ZP_08165877.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] gi|325485352|gb|EGC87821.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] Length = 341 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C+ C+ CV+ CP + I ++CI CG+C CP A K Sbjct: 179 VPNACVQCEKPACVDACPTGASVRRDDGITVIDYEKCIACGLCLAACPYGARK 231 >gi|295115323|emb|CBL36170.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SM4/1] Length = 507 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 13/105 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT------- 59 N I+ + C C +D + N A I D+C+ CG C CP AI + Sbjct: 167 NAIIVQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQCLVNCPFGAIADKSQIFQVIR 226 Query: 60 --EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ + + Q+ P +T K L +A K G +E Sbjct: 227 AIQSGERVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|219871790|ref|YP_002476165.1| electron transport complex protein RnfC [Haemophilus parasuis SH0165] gi|219691994|gb|ACL33217.1| electron transport complex protein RnfC/NADH:ubiquinone oxidoreductase, subunit RnfC [Haemophilus parasuis SH0165] Length = 666 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA----------IHPDECIDCGVCEPECP 51 NCI C + C + CPV + + A H D CI+CGVC CP Sbjct: 378 NCIRC--SSCSDACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCP 429 >gi|55378014|ref|YP_135864.1| molybdopterin oxidoreductase [Haloarcula marismortui ATCC 43049] gi|55230739|gb|AAV46158.1| molybdopterin oxidoreductase [Haloarcula marismortui ATCC 43049] Length = 276 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+VCPV+ Y + + I D+CI C C CP +A Sbjct: 71 CQHCENAPCVKVCPVNATYTRDDGIVEIDYDKCIGCRYCMAACPYNA 117 >gi|311279455|ref|YP_003941686.1| tetrathionate reductase subunit B [Enterobacter cloacae SCF1] gi|308748650|gb|ADO48402.1| tetrathionate reductase subunit B [Enterobacter cloacae SCF1] Length = 249 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 LC H D CV VCPV F + + I C+ C C CP DA I DT+ Sbjct: 99 LCNHCDSPPCVPVCPVQATFQRKDGIVVIDNTRCVGCAYCVQACPYDARFINHDTQ 154 >gi|291460671|ref|ZP_06600061.1| Na(+)-translocating NADH-quinone reductase, A subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291416630|gb|EFE90349.1| Na(+)-translocating NADH-quinone reductase, A subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 485 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 14/77 (18%) Query: 6 TENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV CP + + F ++ ECI+CG C CP A Sbjct: 393 TTACINCGR--CVSACPENLMPTLMMQSALRKDTARFTKLYGMECIECGCCSYVCP--AK 448 Query: 56 KPDTEPGLELWLKINSE 72 +P T+ E+ ++N+E Sbjct: 449 RPLTQGFKEMKRRVNAE 465 >gi|18312508|ref|NP_559175.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|4099070|gb|AAD00534.1| putative molybdopterin oxidoreductase iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|18159970|gb|AAL63357.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] Length = 214 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+ CP Y+ E+ L ++ D CI CG C CP A Sbjct: 82 VPKQCNHCENAPCVKPCPTGATYKTEDGLVLVNDDLCIGCGACIQACPYGA 132 >gi|332298379|ref|YP_004440301.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] gi|332181482|gb|AEE17170.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] Length = 56 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV E + I C+ CG C CP +AI Sbjct: 1 MAYKITDACVNCGS--CEGECPVGAISEDGDKRVIDAASCVSCGTCAAACPTEAI 53 >gi|302383058|ref|YP_003818881.1| NADH-quinone oxidoreductase, chain I [Brevundimonas subvibrioides ATCC 15264] gi|302193686|gb|ADL01258.1| NADH-quinone oxidoreductase, chain I [Brevundimonas subvibrioides ATCC 15264] Length = 163 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIESEPRSDGSRRTTRYDIDMVKCIYCGLCQEACPVDAIV 119 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 NSE+AT+ T++E L A++ ++E+ + N Sbjct: 120 EGP----------NSEFATE-----TREELLYDKARLLDNGDRWERQIARN 155 >gi|150401260|ref|YP_001325026.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013963|gb|ABR56414.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 314 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 17/21 (80%) Query: 33 LAIHPDECIDCGVCEPECPVD 53 ++I D+C+DCG+CE CP+D Sbjct: 241 MSIDKDKCVDCGLCEKNCPMD 261 >gi|158523129|ref|YP_001530999.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511955|gb|ABW68922.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 392 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y V + LC CV C ++ F + ++ D+CI CG+C C A+K Sbjct: 294 YFVALDETLCNGCGKCVRRCQMNAFVVKDKMAVLNIDKCIGCGLCVTTCKTGALK 348 >gi|117619673|ref|YP_857013.1| hydrogenase-4 component A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561080|gb|ABK38028.1| hydrogenase-4 component A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 221 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+H D C +VCPV+ + + + ++ CI C +C CP AI+ Sbjct: 49 VQCRHCDDAPCSKVCPVEAIRQTGDCVQLNESLCIGCNLCAVACPFGAIQ 98 >gi|315924362|ref|ZP_07920584.1| isoquinoline 1-oxidoreductase, alpha subunit [Pseudoramibacter alactolyticus ATCC 23263] gi|315622241|gb|EFV02200.1| isoquinoline 1-oxidoreductase, alpha subunit [Pseudoramibacter alactolyticus ATCC 23263] Length = 591 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ + CI CK C+ CP F E+ + C+ CGVC CPVDAI Sbjct: 537 VLMDKCIGCKQ--CIGTGCPALEFGRIEDQKMTITNACVGCGVCGQVCPVDAI 587 >gi|313887323|ref|ZP_07821014.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923242|gb|EFR34060.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 393 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 12 CKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C ++CP C EG ++ + D CI+C CE CP + +P Sbjct: 11 CGCEACRQICPKGCIRLERDEEGFDYPIVDTDRCIECHKCERVCPFMKLDEPRKP 65 >gi|224369477|ref|YP_002603641.1| RnfB [Desulfobacterium autotrophicum HRM2] gi|223692194|gb|ACN15477.1| RnfB [Desulfobacterium autotrophicum HRM2] Length = 273 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 DCVE C D + + ++ D CI CG C CP I Sbjct: 147 DCVEACKYDAIHVEDGLAVVNYDHCIGCGACVKACPRSII 186 >gi|218782860|ref|YP_002434178.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfatibacillum alkenivorans AK-01] gi|218764244|gb|ACL06710.1| Indolepyruvate ferredoxin oxidoreductase, alpha/beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 617 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 12 CK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CK H CV+ Y N +AI+ ++CI C VC CP AI P Sbjct: 568 CKDHRLCVDALGCPAMYVENNKVAINAEQCIGCAVCAQVCPEHAIVP 614 >gi|153809516|ref|ZP_01962184.1| hypothetical protein BACCAC_03834 [Bacteroides caccae ATCC 43185] gi|149127824|gb|EDM19047.1| hypothetical protein BACCAC_03834 [Bacteroides caccae ATCC 43185] Length = 489 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + Y +T C C C CP D +N A I + CI CG+C CP AI Sbjct: 112 INYEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHETCISCGICHKSCPYHAI 167 >gi|50120186|ref|YP_049353.1| hydrogenase-4 component A [Pectobacterium atrosepticum SCRI1043] gi|49610712|emb|CAG74157.1| hydrogenase-4 component A [Pectobacterium atrosepticum SCRI1043] Length = 206 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 1 MTYVVTEN------CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T V TE+ C C+ C VCPV+ + ++ CI C +C CP A Sbjct: 37 LTVVKTEDKTAPLMCRQCEDAPCARVCPVNAITHENAAIVLNESLCIGCKLCGLVCPFGA 96 Query: 55 IKPD 58 I P Sbjct: 97 ITPS 100 >gi|301061344|ref|ZP_07202126.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2] gi|300444663|gb|EFK08646.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2] Length = 299 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C G + I+ CI CG+CE CP AI+ Sbjct: 64 ERCVACYL--CAAACPVSCISMGGAEREDGRRWATWFRINFARCIYCGLCEEACPTLAIQ 121 >gi|283780218|ref|YP_003370973.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283438671|gb|ADB17113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 175 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 13/59 (22%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-----------NFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CPVDC Y G+ AI +C+ C +C CPVD I Sbjct: 64 TCIACDQ--CAKACPVDCIYIGKERVEGSKGFKITGFAIDYSKCMFCALCVEPCPVDCI 120 >gi|254517630|ref|ZP_05129686.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] gi|226911379|gb|EEH96580.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] Length = 496 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C E C I+ + C +CG+C+ CP DAI P Sbjct: 105 YSVTDSCRNCLAHKCHEACNFGAITYVAGRAYINQELCKECGMCKKACPYDAIAEVMRP 163 >gi|16130627|ref|NP_417200.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K-12 substr. MG1655] gi|89109507|ref|AP_003287.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K-12 substr. W3110] gi|170082296|ref|YP_001731616.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K-12 substr. DH10B] gi|238901857|ref|YP_002927653.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli BW2952] gi|256024773|ref|ZP_05438638.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia sp. 4_1_40B] gi|300947002|ref|ZP_07161228.1| hydrogenase 4 subunit H [Escherichia coli MS 116-1] gi|300954960|ref|ZP_07167372.1| hydrogenase 4 subunit H [Escherichia coli MS 175-1] gi|301027397|ref|ZP_07190736.1| hydrogenase 4 subunit H [Escherichia coli MS 196-1] gi|301645300|ref|ZP_07245250.1| hydrogenase 4 subunit H [Escherichia coli MS 146-1] gi|307139407|ref|ZP_07498763.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli H736] gi|331643404|ref|ZP_08344535.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H736] gi|123920|sp|P16432|HYCF_ECOLI RecName: Full=Formate hydrogenlyase subunit 6; Short=FHL subunit 6; AltName: Full=Hydrogenase-3 component F gi|41685|emb|CAA35551.1| hycF [Escherichia coli] gi|882613|gb|AAA69230.1| formate hydrogenlyase subunit 6 [Escherichia coli str. K-12 substr. MG1655] gi|1789075|gb|AAC75762.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K-12 substr. MG1655] gi|85675541|dbj|BAE76797.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K12 substr. W3110] gi|169890131|gb|ACB03838.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli str. K-12 substr. DH10B] gi|238861136|gb|ACR63134.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli BW2952] gi|260448230|gb|ACX38652.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|299879311|gb|EFI87522.1| hydrogenase 4 subunit H [Escherichia coli MS 196-1] gi|300318095|gb|EFJ67879.1| hydrogenase 4 subunit H [Escherichia coli MS 175-1] gi|300453389|gb|EFK17009.1| hydrogenase 4 subunit H [Escherichia coli MS 116-1] gi|301076418|gb|EFK91224.1| hydrogenase 4 subunit H [Escherichia coli MS 146-1] gi|315137327|dbj|BAJ44486.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli DH1] gi|315615108|gb|EFU95745.1| formate hydrogenlyase subunit 6 [Escherichia coli 3431] gi|331036875|gb|EGI09099.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli H736] gi|1093499|prf||2104213F hycF gene Length = 180 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|320169962|gb|EFW46861.1| ATP-binding cassette sub-family E member 1 [Capsaspora owczarzaki ATCC 30864] Length = 602 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+EV P D I + CI CG+C +CP +AI Sbjct: 40 CIEVAPTD------KISYISEELCIGCGICVKKCPFEAI 72 >gi|317056952|ref|YP_004105419.1| hypothetical protein Rumal_2302 [Ruminococcus albus 7] gi|315449221|gb|ADU22785.1| hypothetical protein Rumal_2302 [Ruminococcus albus 7] Length = 205 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y V ++CI C C+ CP C E I + C+ CG C CPV A+ Sbjct: 153 YFVNDDCIGCG--SCLSACPQSCI-ELNGKAVIRQENCLHCGNCAEVCPVGAV 202 >gi|294141483|ref|YP_003557461.1| hypothetical protein SVI_2712 [Shewanella violacea DSS12] gi|293327952|dbj|BAJ02683.1| hypothetical protein [Shewanella violacea DSS12] Length = 683 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 C H D C++ CP + + + A+ P+ C CG C CP +A P +P Sbjct: 158 CNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNA--PQLDP 210 >gi|257063349|ref|YP_003143021.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256791002|gb|ACV21672.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +C CK+ CV+VCP + EN + I D+CI C C CP + E Sbjct: 58 YYLPISCQHCKNPACVDVCPTGASHRTENGTVQIDHDKCIGCQFCVMACPYGVRYLNEEE 117 Query: 62 GL 63 G+ Sbjct: 118 GV 119 >gi|197335878|ref|YP_002156366.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio fischeri MJ11] gi|197317368|gb|ACH66815.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio fischeri MJ11] Length = 228 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENAPCVMVCPTGAAYKDETTGIVDVHNEKCVGCGYCLVACP 143 >gi|190893221|ref|YP_001979763.1| NADH-ubiquinone oxidoreductase [Rhizobium etli CIAT 652] gi|190698500|gb|ACE92585.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] Length = 188 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 67 KCVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|149191081|ref|ZP_01869341.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio shilonii AK1] gi|148835109|gb|EDL52086.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio shilonii AK1] Length = 228 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP V P+T Sbjct: 97 DSCQHCENPPCVYVCPTGAAYKDEETGIIDVHNEKCVGCGYCLAACPYQVRFFNPETR 154 >gi|187924671|ref|YP_001896313.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phytofirmans PsJN] gi|187715865|gb|ACD17089.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phytofirmans PsJN] Length = 413 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CPVD +N + + C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPVDAITHDDNNYVVKAEICNGCMACVPPCPTGAI 64 >gi|16263279|ref|NP_436072.1| NADH:ubiquinone oxidoreductase subunit 6 (chain I) [Sinorhizobium meliloti 1021] gi|81774724|sp|Q92YN8|NUOI2_RHIME RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|14523955|gb|AAK65484.1| NADH:ubiquinone oxidoreductase subunit 6 (chain I) [Sinorhizobium meliloti 1021] Length = 188 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 67 KCVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|226946334|ref|YP_002801407.1| Fe-S/FAD domain-containing protein [Azotobacter vinelandii DJ] gi|226721261|gb|ACO80432.1| Fe-S/FAD domain protein [Azotobacter vinelandii DJ] Length = 938 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 D+CI+CG CEP CP + + +W I + Sbjct: 538 DKCIECGFCEPVCPSRGLTLTPRQRIVMWRDIQA 571 >gi|317054472|ref|YP_004118497.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pantoea sp. At-9b] gi|316952467|gb|ADU71941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pantoea sp. At-9b] Length = 201 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 LC+H + C VCPV+ + + ++ + C+ C +C CP AI+ L + Sbjct: 50 LCRHCEDAPCASVCPVNAITRVDGAVQLNANLCVSCKLCGIACPFGAIEFSGSRPLHIPA 109 Query: 68 KINS 71 +N+ Sbjct: 110 DVNT 113 >gi|307304402|ref|ZP_07584153.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] gi|307318109|ref|ZP_07597545.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306896150|gb|EFN26900.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306902604|gb|EFN33198.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] Length = 188 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 67 KCVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|301062896|ref|ZP_07203479.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300443013|gb|EFK07195.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 649 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 11/18 (61%), Positives = 14/18 (77%) Query: 35 IHPDECIDCGVCEPECPV 52 + P +CI CGVCE ECP+ Sbjct: 607 VDPKQCIGCGVCEHECPI 624 >gi|251789756|ref|YP_003004477.1| RnfABCDGE type electron transport complex subunit B [Dickeya zeae Ech1591] gi|247538377|gb|ACT06998.1| electron transport complex, RnfABCDGE type, B subunit [Dickeya zeae Ech1591] Length = 196 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 108 VAWIDEENCIGC--TKCIQACPVDAIIGSTRAVHTVIRDLCTGCNLCVAPCPTDCIE 162 >gi|218886034|ref|YP_002435355.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756988|gb|ACL07887.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 195 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C++ C+ CPV + + E+ + +H D CI CG C CP A P P L+ Sbjct: 66 CNHCENPACLNACPVKAYEKREDGVVVHHQDRCIGCGNCIRSCPYGA--PRYNPVLK 120 >gi|167623860|ref|YP_001674154.1| electron transport complex protein RnfB [Shewanella halifaxensis HAW-EB4] gi|167353882|gb|ABZ76495.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAFIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|281355829|ref|ZP_06242323.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] gi|281318709|gb|EFB02729.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] Length = 57 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C+ CV CPV + +++ +C+DCG C CPV+AI Sbjct: 8 EKCTGCET--CVGECPVSAISMVDGKASVNAGDCVDCGACTGACPVEAI 54 >gi|149238245|ref|XP_001524999.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146451596|gb|EDK45852.1| methionyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 755 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 17/83 (20%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCG-------VCEPECPVDAIKPDTEPGLELWLKINSE 72 +CP C YE D+C CG + EP C VD KP +P ++LK+N E Sbjct: 331 ICP-KCGYEDA-----RGDQCDKCGQLLDPLELIEPRCKVDGTKPIVKPSTHIYLKLN-E 383 Query: 73 YAT---QWPNITTKKESLPSAAK 92 T +W +I+++K + +K Sbjct: 384 LETPLKEWVDISSEKGAWSKNSK 406 >gi|153000588|ref|YP_001366269.1| electron transport complex protein RnfB [Shewanella baltica OS185] gi|160875224|ref|YP_001554540.1| electron transport complex protein RnfB [Shewanella baltica OS195] gi|217973445|ref|YP_002358196.1| electron transport complex protein RnfB [Shewanella baltica OS223] gi|304408662|ref|ZP_07390283.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS183] gi|307305491|ref|ZP_07585239.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica BA175] gi|151365206|gb|ABS08206.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS185] gi|160860746|gb|ABX49280.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS195] gi|217498580|gb|ACK46773.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS223] gi|304352483|gb|EFM16880.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS183] gi|306911794|gb|EFN42219.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica BA175] gi|315267417|gb|ADT94270.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS678] Length = 204 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK--P 57 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I P Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTTDCTGCDLCVEPCPVDCIDMIP 163 Query: 58 DTEPGLELW 66 T P L+ W Sbjct: 164 VT-PNLKNW 171 >gi|15642809|ref|NP_227850.1| iron-sulfur cluster-binding protein [Thermotoga maritima MSB8] gi|170288707|ref|YP_001738945.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga sp. RQ2] gi|281412096|ref|YP_003346175.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga naphthophila RKU-10] gi|4980519|gb|AAD35128.1|AE001691_2 iron-sulfur cluster-binding protein [Thermotoga maritima MSB8] gi|170176210|gb|ACB09262.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga sp. RQ2] gi|281373199|gb|ADA66761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga naphthophila RKU-10] Length = 357 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YVV E C+ C C + CPV I ++CI CG C C A+ P + Sbjct: 189 YVVEEKCVAC--GTCAKFCPVGAITV-TKVAKIDYEKCIGCGQCIAMCSYGAMSPKWDSS 245 Query: 63 LELWLKINSEYA 74 + K +EYA Sbjct: 246 TDSLSKKMAEYA 257 >gi|307822858|ref|ZP_07653089.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] gi|307736462|gb|EFO07308.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] Length = 76 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 15/23 (65%), Positives = 18/23 (78%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 L I+ D+C CGVCEPECP +AI Sbjct: 3 LVINEDKCARCGVCEPECPNEAI 25 >gi|302343450|ref|YP_003807979.1| hypothetical protein Deba_2020 [Desulfarculus baarsii DSM 2075] gi|301640063|gb|ADK85385.1| conserved hypothetical protein [Desulfarculus baarsii DSM 2075] Length = 372 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+ C++ C +CP EG + I D C+ C+ CP P + G+ Sbjct: 120 IPRRCMHCRNAPCANLCPFGAARVEGNGVVHIDGDLCLGGAKCKNVCPWKI--PQRQSGV 177 Query: 64 ELWLKINSEYA 74 L+L + EYA Sbjct: 178 GLYLHLLPEYA 188 >gi|289193023|ref|YP_003458964.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus sp. FS406-22] gi|288939473|gb|ADC70228.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus sp. FS406-22] Length = 269 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + ENC+ C C+++C D E+F I+P C CG CE C +AI+P Sbjct: 63 YKINENCVKC--GKCLDICQFDAI---EDF-KINPILCEGCGACELICEFNAIEP 111 >gi|215488036|ref|YP_002330467.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli O127:H6 str. E2348/69] gi|215266108|emb|CAS10533.1| formate hydrogenlyase complex iron-sulfur protein HycF [Escherichia coli O127:H6 str. E2348/69] Length = 180 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWQFNLGRCIFCGRCEEVCPTVAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|170745492|ref|YP_001766949.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170659093|gb|ACB28147.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 931 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 756 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 799 >gi|167534830|ref|XP_001749090.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772514|gb|EDQ86165.1| predicted protein [Monosiga brevicollis MX1] Length = 204 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 18 VEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI +TEP Sbjct: 80 FEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIETEP 126 >gi|197123120|ref|YP_002135071.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196172969|gb|ACG73942.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 491 Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C+ C+ C CP Y N + + D CI CG C CP A Sbjct: 60 CMQCEAHPCTVDCPSGATYVDANGVVVVDADVCIGCGTCVAACPYGA 106 >gi|118594444|ref|ZP_01551791.1| electron transport complex protein RnfB [Methylophilales bacterium HTCC2181] gi|118440222|gb|EAV46849.1| electron transport complex protein RnfB [Methylophilales bacterium HTCC2181] Length = 188 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + CI C T C++ CPVD ++ I EC C +C P CPVD I Sbjct: 105 IAIIDEDTCIGC--TLCIQACPVDAILGSAKHMHTIIEKECTGCELCLPPCPVDCI 158 >gi|78357433|ref|YP_388882.1| dissimilatory sulfite reductase subunit alpha and beta-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219838|gb|ABB39187.1| Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 215 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 5/75 (6%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL----WLKINSE 72 C CP D G A P CIDCG C CP A+ + GL + L Sbjct: 103 CAAACPDDAIDMGSGVPAFDPLRCIDCGQCLLRCPEKALSCRRQ-GLRVIAGGRLGRRPR 161 Query: 73 YATQWPNITTKKESL 87 AT P + +L Sbjct: 162 LATPLPGVYDGASAL 176 >gi|95928880|ref|ZP_01311626.1| protein of unknown function DUF169 [Desulfuromonas acetoxidans DSM 684] gi|95135225|gb|EAT16878.1| protein of unknown function DUF169 [Desulfuromonas acetoxidans DSM 684] Length = 326 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + TE C C CV CPV+ F E ++P C C C +CP +AI+ Sbjct: 6 IATEQCTGCGM--CVNFCPVEVFQLETSGEKNTVKVVNPSACWACDTCVGQCPTNAIR 61 >gi|319795633|ref|YP_004157273.1| 4fe-4S ferredoxin, iron-sulfur binding protein [Variovorax paradoxus EPS] gi|315598096|gb|ADU39162.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Variovorax paradoxus EPS] Length = 94 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 4 DECINCDVCEPECPNDAI 21 >gi|312796966|ref|YP_004029888.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] gi|312168741|emb|CBW75744.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 355 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CI C T C++ CPVD L + D C C +C CPVD I+ Sbjct: 119 CIGC--TLCMQACPVDAIVGAPKQLHTVLADWCTGCDLCVAPCPVDCIE 165 >gi|307720609|ref|YP_003891749.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978702|gb|ADN08737.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 83 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M ++ + CI C C E CP EG+ I PD C +C G+ C CPVD Sbjct: 1 MALIINDECIACDA--CREECPTLAIEEGDPIYYIDPDRCTECVGIYDEPACISVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDKD 64 >gi|296387989|ref|ZP_06877464.1| electron transport complex protein RnfC [Pseudomonas aeruginosa PAb1] Length = 656 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 12/53 (22%) Query: 9 CILCKHTDCVEVCPVDC------FY----EGENFLAIHPDECIDCGVCEPECP 51 CI C DC VCPV F+ E E LA + +CI+CG C CP Sbjct: 369 CIRCG--DCARVCPVSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCP 419 >gi|295092507|emb|CBK78614.1| Iron only hydrogenase large subunit, C-terminal domain [Clostridium cf. saccharolyticum K10] Length = 507 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 13/105 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT------- 59 N I+ + C C +D + N A I D+C+ CG C CP AI + Sbjct: 167 NAIIIQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQCLVNCPFGAIADKSQIFQVIR 226 Query: 60 --EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ + + Q+ P +T K L +A K G +E Sbjct: 227 AIQSGERVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|159905253|ref|YP_001548915.1| glutamate synthase (NADPH) [Methanococcus maripaludis C6] gi|159886746|gb|ABX01683.1| Glutamate synthase (NADPH) [Methanococcus maripaludis C6] Length = 510 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V E C+LC+ C C + N + +P+ C C C CP DAI Sbjct: 13 FVDPERCMLCER--CTTECSWGVYRRQGNKILTYPNRCGACLRCVSNCPRDAI 63 >gi|116750829|ref|YP_847516.1| cobyrinic acid a,c-diamide synthase [Syntrophobacter fumaroxidans MPOB] gi|116699893|gb|ABK19081.1| Cobyrinic acid a,c-diamide synthase [Syntrophobacter fumaroxidans MPOB] Length = 292 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C +C D EGE + P C C VC CP +AI+ Sbjct: 74 CASLCRFDAIREGERGYTVDPIRCEGCKVCVAFCPAEAIR 113 >gi|53728930|ref|ZP_00134519.2| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209139|ref|YP_001054364.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae L20] gi|126097931|gb|ABN74759.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 205 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ + F+ ++ CI C C CP DA + Sbjct: 59 FAYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEYTCIGCRYCSMACPYDAPQYSA 118 Query: 60 EPG 62 G Sbjct: 119 SKG 121 >gi|322709044|gb|EFZ00621.1| translation initiation factor RLI1 [Metarhizium anisopliae ARSEF 23] Length = 852 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 8/40 (20%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 C+EV P E+ LA I CI CG+C +CP DAI Sbjct: 222 CIEVTP-------ESRLAFISESLCIGCGICPKKCPFDAI 254 >gi|260598003|ref|YP_003210574.1| anaerobic dimethyl sulfoxide reductase subunit B [Cronobacter turicensis z3032] gi|260217180|emb|CBA31029.1| Anaerobic dimethyl sulfoxide reductase chain B [Cronobacter turicensis z3032] Length = 205 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C+ C +VCP ++ E+ F+ ++ D CI C C CP A + + Sbjct: 59 FAYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 AKG 121 >gi|297568183|ref|YP_003689527.1| Electron-transferring-flavoprotein dehydrogenase [Desulfurivibrio alkaliphilus AHT2] gi|296924098|gb|ADH84908.1| Electron-transferring-flavoprotein dehydrogenase [Desulfurivibrio alkaliphilus AHT2] Length = 556 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 ++C+ + C+ CP + + G +P C+ C C+ +CP D I+ Sbjct: 491 DHCLAKFNAPCITFCPAGVYEKIGPQPRPANPSNCLHCKTCQRKCPFDNIR 541 >gi|51893469|ref|YP_076160.1| anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] gi|51857158|dbj|BAD41316.1| anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] Length = 198 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y + +C C CV VCP Y+ + + ++ D+C+ C C CP DA + + Sbjct: 58 SYWFSISCNHCADPACVYVCPTGAMYKRSDNGLVLVNQDDCVGCQSCVWACPYDAPQYNP 117 Query: 60 EPG 62 E G Sbjct: 118 EVG 120 >gi|109898597|ref|YP_661852.1| FAD linked oxidase-like [Pseudoalteromonas atlantica T6c] gi|109700878|gb|ABG40798.1| FAD linked oxidase-like protein [Pseudoalteromonas atlantica T6c] Length = 949 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 D+CI+CG CE CP A+ + +W +I Sbjct: 539 DKCIECGFCEAVCPSQALSYTPRQRIAIWRRI 570 >gi|124267483|ref|YP_001021487.1| putative electron transport-like protein [Methylibium petroleiphilum PM1] gi|124260258|gb|ABM95252.1| putative electron transport-related protein [Methylibium petroleiphilum PM1] Length = 228 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C T C++ CPVDC + + +C C +C P CPVD I Sbjct: 98 CIGC--TLCIKACPVDCIVGAAKQMHTVVESQCTGCELCIPVCPVDCIS 144 >gi|305662559|ref|YP_003858847.1| ABC transporter related [Ignisphaera aggregans DSM 17230] gi|304377128|gb|ADM26967.1| ABC transporter related [Ignisphaera aggregans DSM 17230] Length = 608 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 9/49 (18%) Query: 17 CVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ CP+ + E + I+ D+CI CG+C +CP AI+ Sbjct: 24 CIRFCPINKTKPYKAIEISSEKKGKPIIYEDKCIACGICIKKCPFKAIR 72 >gi|296135781|ref|YP_003643023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295795903|gb|ADG30693.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 275 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + + D+CI C C CP A + D + G+ Sbjct: 71 KSCLHCEEPPCVPVCPTGASYKRQEDGIVLVDSDKCIGCKYCSWACPYGAREYDEDRGV 129 >gi|240102306|ref|YP_002958614.1| formate dehydrogenase I subunit B (fdh1B) [Thermococcus gammatolerans EJ3] gi|239909859|gb|ACS32750.1| formate dehydrogenase I subunit B (fdh1B) [Thermococcus gammatolerans EJ3] Length = 165 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V NC C+ C+ VCP F + + +A P +CI C +C CP K D E Sbjct: 40 FTVPFNCRHCEKAPCLNVCPTGALFRDKDGAVAFDPLKCIGCLMCAVACPFGVPKLDEE 98 >gi|261342162|ref|ZP_05970020.1| formate hydrogenlyase subunit 6 [Enterobacter cancerogenus ATCC 35316] gi|288315495|gb|EFC54433.1| formate hydrogenlyase subunit 6 [Enterobacter cancerogenus ATCC 35316] Length = 180 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AI+ E Sbjct: 38 QQCIGC--AACVNACPSNALTVEIDLKSGELAWQFNLGRCIFCGRCEEVCPTAAIRLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|226327802|ref|ZP_03803320.1| hypothetical protein PROPEN_01679 [Proteus penneri ATCC 35198] gi|225203506|gb|EEG85860.1| hypothetical protein PROPEN_01679 [Proteus penneri ATCC 35198] Length = 247 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV F + + + + C+ C C CP DA Sbjct: 99 LCNHCDEPPCVPVCPVQATFQRKDGIVVVDNERCVGCAYCVQACPYDA 146 >gi|218261084|ref|ZP_03476043.1| hypothetical protein PRABACTJOHN_01707 [Parabacteroides johnsonii DSM 18315] gi|218224231|gb|EEC96881.1| hypothetical protein PRABACTJOHN_01707 [Parabacteroides johnsonii DSM 18315] Length = 516 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP Y+G I+PD CI CG CE CPV ++ Sbjct: 441 CAEHCPTQAVHMVPYKGTLTIPQINPDLCIGCGGCESICPVRPMR 485 >gi|254421090|ref|ZP_05034814.1| NADH-quinone oxidoreductase, chain I subfamily [Brevundimonas sp. BAL3] gi|196187267|gb|EDX82243.1| NADH-quinone oxidoreductase, chain I subfamily [Brevundimonas sp. BAL3] Length = 163 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMVKCIYCGLCQEACPVDAIV 119 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 NSEYA + T++E L A++ ++E+ + N Sbjct: 120 EGP----------NSEYA-----VETREELLFDKARLLDNGDRWERQIAKN 155 >gi|170724604|ref|YP_001758630.1| dimethylsulfoxide reductase subunit B [Shewanella woodyi ATCC 51908] gi|169809951|gb|ACA84535.1| dimethylsulfoxide reductase, chain B [Shewanella woodyi ATCC 51908] Length = 225 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CV+ CP ++ +H D CI C C CP DA + D Sbjct: 77 FAYYMSIGCNHCSEPVCVKACPTGAMHKRRQDGLVHVAQDLCIGCESCARACPYDAPQID 136 Query: 59 TE 60 +E Sbjct: 137 SE 138 >gi|33592565|ref|NP_880209.1| putative iron-sulfur binding protein [Bordetella pertussis Tohama I] gi|33572211|emb|CAE41759.1| putative iron-sulfur binding protein [Bordetella pertussis Tohama I] gi|332381983|gb|AEE66830.1| putative iron-sulfur binding protein [Bordetella pertussis CS] Length = 696 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V ++ C LC CV CP + + L + C+ CG+C CP +AI Sbjct: 562 VDSDACTLC--MSCVSACPSNALLDNPQSPQLRMVEKNCVQCGLCATTCPENAI 613 >gi|319902323|ref|YP_004162051.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides helcogenes P 36-108] gi|319417354|gb|ADV44465.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides helcogenes P 36-108] Length = 320 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP D I Sbjct: 218 TVACIGCGK--CVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQDTI 265 >gi|304314067|ref|YP_003849214.1| carbon monoxide dehydrogenase, iron sulfur subunit [Methanothermobacter marburgensis str. Marburg] gi|302587526|gb|ADL57901.1| carbon monoxide dehydrogenase, iron sulfur subunit [Methanothermobacter marburgensis str. Marburg] Length = 154 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 21/44 (47%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C +CPV E + L I D CI C +C CP I D+E Sbjct: 49 CARICPVGAIREVDGALVIDEDACILCKLCMVACPAGMIVLDSE 92 >gi|260597687|ref|YP_003210258.1| formate hydrogenlyase subunit 2 [Cronobacter turicensis z3032] gi|260216864|emb|CBA30397.1| Formate hydrogenlyase subunit 2 [Cronobacter turicensis z3032] Length = 243 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ + ++ C+ C +C CP AI+ L + Sbjct: 93 CHHCEDAPCAQVCPVNAITREAGAIQLNESLCVSCKLCGIACPFGAIEFSGSRPLHIPAN 152 Query: 69 INS 71 +NS Sbjct: 153 VNS 155 >gi|258624435|ref|ZP_05719382.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM603] gi|258583282|gb|EEW08084.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM603] Length = 212 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 81 KSCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCLAACP 127 >gi|218662859|ref|ZP_03518789.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli IE4771] Length = 165 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 44 KCVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 99 >gi|220904268|ref|YP_002479580.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868567|gb|ACL48902.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 366 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++CI C CV CP ++ + CI C C CP AI D +E + Sbjct: 193 DDCIGC--AKCVHSCPQQALSMRDHKSHVETARCIGCFECMTVCPAKAIVIDWATEMEPF 250 Query: 67 LKINSEYA 74 ++ +EYA Sbjct: 251 MERMTEYA 258 >gi|218193826|gb|EEC76253.1| hypothetical protein OsI_13702 [Oryza sativa Indica Group] Length = 261 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%) Query: 7 ENCILCKHTDCV------EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKP 57 E CI CK + V E P+ + GE+ L +P + CI C +CE CP AI Sbjct: 120 ERCIACKLCEAVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 179 Query: 58 DTE 60 + E Sbjct: 180 EAE 182 >gi|53804899|ref|YP_113273.1| putative glutamate synthase (NADPH) small subunit [Methylococcus capsulatus str. Bath] gi|53758660|gb|AAU92951.1| pyridine nucleotide-disulphide oxidoreductase family protein [Methylococcus capsulatus str. Bath] Length = 546 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 NC C C CP + G+ + + D C C VC +CP AI+ +EPG Sbjct: 491 NCFECD--GCYGACPEQAIVKLGPGKRYRYDY-DRCTGCAVCHEQCPAHAIEMISEPG 545 >gi|331268324|ref|YP_004394816.1| hydrogenase [Clostridium botulinum BKT015925] gi|329124874|gb|AEB74819.1| hydrogenase [Clostridium botulinum BKT015925] Length = 448 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 7/92 (7%) Query: 15 TDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKIN 70 T C + CP D + N I D+C DCG C CP +I E P ++L K Sbjct: 92 TLCQKSCPFDAILVDKNTNSTYISLDKCTDCGFCVNACPTGSILDKIEFIPLIDLLNKEE 151 Query: 71 SEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 + A P+I + A M+ ++ ++K Sbjct: 152 TVIAAVAPSIIGQ---FGDAVTMNQLRSAFKK 180 >gi|330807454|ref|YP_004351916.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375562|gb|AEA66912.1| Putative oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 955 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI+CG CEP CP + + +W I ++ Sbjct: 538 DKCIECGFCEPVCPSKDLTLSPRQRIVIWRDIQAK 572 >gi|317055057|ref|YP_004103524.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Ruminococcus albus 7] gi|315447326|gb|ADU20890.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ruminococcus albus 7] Length = 603 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TE CI C+ + CP +G+ +AI C CG+C CPV+AI Sbjct: 549 TEKCINCQKCKNLLGCPGLVLRDGK--IAIEESLCTGCGLCAQVCPVNAI 596 >gi|262165720|ref|ZP_06033457.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM223] gi|262025436|gb|EEY44104.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM223] Length = 553 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|239908207|ref|YP_002954948.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239798073|dbj|BAH77062.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 375 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + CI C +CV VCPV I CI CG C CP A+ D + Sbjct: 197 VEPKKCIGC--AECVAVCPVGAATMQGKKAVIDKATCIGCGECLTVCPKKAMSIDWRTEI 254 Query: 64 ELWLKINSEYA 74 +++ EYA Sbjct: 255 VPFMERMVEYA 265 >gi|219109553|ref|XP_002176531.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411066|gb|EEC50994.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 584 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%) Query: 46 CEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 C+ CP +A G WL+++S + T K E P ++K K K + Sbjct: 192 CKGSCPPEATAFTGNAGTRRWLELHSSSNSSKVECTKKSEPKPKSSKTIAPNPKASKTSA 251 Query: 106 PNPGGKNT 113 PNP T Sbjct: 252 PNPKSSKT 259 >gi|153953474|ref|YP_001394239.1| hypothetical protein CKL_0840 [Clostridium kluyveri DSM 555] gi|219854096|ref|YP_002471218.1| hypothetical protein CKR_0753 [Clostridium kluyveri NBRC 12016] gi|146346355|gb|EDK32891.1| Hypothetical protein CKL_0840 [Clostridium kluyveri DSM 555] gi|219567820|dbj|BAH05804.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 178 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 I C+H CV VCPV E + + D+CI C C C V A+ Sbjct: 62 IQCRHCTEAFCVNVCPVKAIVENHGSIFVQEDKCIGCKNCMLVCAVGAV 110 >gi|119094136|gb|ABL60966.1| iron-sulfur cluster-binding protein [uncultured marine bacterium HF10_19P19] Length = 669 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Query: 11 LCKHTD--------CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 LC H+ C++VCP + +AI P C CG+C CP A + P Sbjct: 279 LCAHSRNSLTGCSRCLDVCPAGAIVVAGDHVAIDPAVCGGCGMCGAVCPSGAAQTAFPP 337 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 T+ C +C CV CP + + L D C+ CG+C CP I Sbjct: 524 TDKCTIC--LSCVGACPAGALQDNPDAPQLLFREDACLQCGICVATCPEKVI 573 >gi|332299288|ref|YP_004441209.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|332176351|gb|AEE12041.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 393 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 12 CKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C ++CP C EG ++ + D CI+C CE CP + +P Sbjct: 11 CGCEACRQICPKGCIRLERDEEGFDYPIVDTDRCIECHKCERVCPFMKLDEPRKP 65 >gi|316964779|gb|EFV49731.1| putative ABC transporter, ATP-binding protein [Trichinella spiralis] Length = 575 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 11/66 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDE---------CIDCGVCEPE 49 +T + N CK +C +VC C G+ + + P CI CG+C + Sbjct: 15 ITRIAIVNNDRCKPKNCGQVCKKSCPVVRMGKLCIEVTPSSKIAFISESLCIGCGICVKK 74 Query: 50 CPVDAI 55 CP DAI Sbjct: 75 CPYDAI 80 >gi|301310574|ref|ZP_07216513.1| ferredoxin-type protein [Bacteroides sp. 20_3] gi|300832148|gb|EFK62779.1| ferredoxin-type protein [Bacteroides sp. 20_3] Length = 532 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP YEG ++PD CI CG CE CPV ++ Sbjct: 457 CSEHCPTQAVHMVPYEGTLTIPQVNPDLCIGCGGCESICPVRPMR 501 >gi|283832972|ref|ZP_06352713.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291071579|gb|EFE09688.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 210 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP ++ G+ + + D+C+ CG C CP A + + Sbjct: 72 AYTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQMNE 131 Query: 60 EPG 62 E G Sbjct: 132 EAG 134 >gi|262382041|ref|ZP_06075179.1| ferredoxin-type protein [Bacteroides sp. 2_1_33B] gi|262297218|gb|EEY85148.1| ferredoxin-type protein [Bacteroides sp. 2_1_33B] Length = 532 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP YEG ++PD CI CG CE CPV ++ Sbjct: 457 CSEHCPTQAVHMVPYEGTLTIPQVNPDLCIGCGGCESICPVRPMR 501 >gi|262165512|ref|ZP_06033249.1| NrfC protein [Vibrio mimicus VM223] gi|262025228|gb|EEY43896.1| NrfC protein [Vibrio mimicus VM223] Length = 228 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACP 143 >gi|255318863|ref|ZP_05360089.1| iron-sulfur cluster-binding protein [Acinetobacter radioresistens SK82] gi|255304119|gb|EET83310.1| iron-sulfur cluster-binding protein [Acinetobacter radioresistens SK82] Length = 100 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 ++ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 14 VSLYITDECINCD--VCEPVCPNEAIFMGEMIYEIHPDLCTECVGHHEQPQCQLFCPVDC 71 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKKES 86 I D ++ E ++ +T +K + Sbjct: 72 IPHDPN-----HVETEDELMQKYKMLTAQKSA 98 >gi|255013988|ref|ZP_05286114.1| ferredoxin-type protein [Bacteroides sp. 2_1_7] Length = 532 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP YEG ++PD CI CG CE CPV ++ Sbjct: 457 CSEHCPTQAVHMVPYEGTLTIPQVNPDLCIGCGGCESICPVRPMR 501 >gi|256810026|ref|YP_003127395.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793226|gb|ACV23895.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 439 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ENCILC C VCP+D + N + D CI C C CP D I P+T Sbjct: 318 ENCILC--ATCSNVCPMDAIIVDRSNGEVLFTDNCISCETCAIHCPRDVI-PNT 368 >gi|163794603|ref|ZP_02188574.1| DMSO reductase chain B [alpha proteobacterium BAL199] gi|159180327|gb|EDP64850.1| DMSO reductase chain B [alpha proteobacterium BAL199] Length = 271 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C+ CV VCP Y+ E + ++ D CI C +C C A + D E G+ Sbjct: 89 RSCLHCETPACVTVCPTGASYKREEDGIVLVNEDLCIGCKLCSWACAYGAREYDHEDGV 147 >gi|150007424|ref|YP_001302167.1| ferredoxin-type protein [Parabacteroides distasonis ATCC 8503] gi|256839673|ref|ZP_05545182.1| ferredoxin-type protein [Parabacteroides sp. D13] gi|298375398|ref|ZP_06985355.1| ferredoxin-type protein [Bacteroides sp. 3_1_19] gi|149935848|gb|ABR42545.1| ferredoxin-type protein [Parabacteroides distasonis ATCC 8503] gi|256738603|gb|EEU51928.1| ferredoxin-type protein [Parabacteroides sp. D13] gi|298267898|gb|EFI09554.1| ferredoxin-type protein [Bacteroides sp. 3_1_19] Length = 532 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP YEG ++PD CI CG CE CPV ++ Sbjct: 457 CSEHCPTQAVHMVPYEGTLTIPQVNPDLCIGCGGCESICPVRPMR 501 >gi|150403002|ref|YP_001330296.1| glutamate synthase (NADPH) [Methanococcus maripaludis C7] gi|150034032|gb|ABR66145.1| Glutamate synthase (NADPH) [Methanococcus maripaludis C7] Length = 510 Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V E C+LC+ C C + N + +P+ C C C CP DAI Sbjct: 13 FVDPERCMLCER--CTTECSWGVYRRQGNKILTYPNRCGACLRCVSNCPRDAI 63 >gi|307945312|ref|ZP_07660648.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseibium sp. TrichSKD4] gi|307771185|gb|EFO30410.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseibium sp. TrichSKD4] Length = 682 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 18/61 (29%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDA 54 + +E C LC CV CPV LA +PD+ C+ CG+C+ CP Sbjct: 520 IRSEGCTLC--LSCVSACPVGA-------LADNPDQPQVSFTEAACVQCGLCQTTCPESV 570 Query: 55 I 55 I Sbjct: 571 I 571 >gi|301064797|ref|ZP_07205171.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441091|gb|EFK05482.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 254 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 Y+ E C C C CPVD G+N + I ++CI CG C CP Sbjct: 176 YIDPEKCKAC--MICARSCPVDAIVGGKNLIHVIDQEKCIKCGTCFEACP 223 >gi|296132692|ref|YP_003639939.1| NIL domain protein [Thermincola sp. JR] gi|296031270|gb|ADG82038.1| NIL domain protein [Thermincola potens JR] Length = 137 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIK 56 + C C H C +CPV Y + + DE CI CG+C CPV AI+ Sbjct: 81 VDRCTHCGH--CTSLCPVGALYIIRPSMEVAFDEEKCIVCGLCLKACPVKAIE 131 >gi|294339944|emb|CAZ88307.1| putative Iron-sulfur cluster ferredoxin [Thiomonas sp. 3As] Length = 275 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C+ CV VCP Y+ + + + D+CI C C CP A + D + G+ Sbjct: 71 KSCLHCEEPPCVPVCPTGASYKRQEDGIVLVDSDKCIGCKYCSWACPYGAREYDEDRGV 129 >gi|253997114|ref|YP_003049178.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera mobilis JLW8] gi|253983793|gb|ACT48651.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera mobilis JLW8] Length = 83 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP Y+GE I+PD C +C C+ CP+D Sbjct: 1 MALMITDECINCDV--CEPACPNTAIYQGEEIYEINPDLCTECVGHYDKPQCQQVCPIDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPRD 62 >gi|311105621|ref|YP_003978474.1| sulfur reductase FeS subunit [Achromobacter xylosoxidans A8] gi|310760310|gb|ADP15759.1| sulfur reductase FeS subunit [Achromobacter xylosoxidans A8] Length = 256 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + +E C+ C C CP DA Sbjct: 111 LCNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCAYCVQACPYDA 158 >gi|303242581|ref|ZP_07329058.1| putative PAS/PAC sensor protein [Acetivibrio cellulolyticus CD2] gi|302589885|gb|EFL59656.1| putative PAS/PAC sensor protein [Acetivibrio cellulolyticus CD2] Length = 556 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 3 YVVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDT 59 Y+VT+N CK+ C+ CPV + I DEC+ CG C CP +A I+ D Sbjct: 4 YLVTKNS-NCKNCYKCIRHCPVKSLKFTDGQAHIVKDECVLCGECYVVCPQNAKQIRQDV 62 Query: 60 EPGLELWLKINSEYATQWPNITT 82 E +L + N Y + P+ Sbjct: 63 EKAKQL-ISENDVYVSLAPSFVA 84 >gi|262372375|ref|ZP_06065654.1| ferredoxin [Acinetobacter junii SH205] gi|262312400|gb|EEY93485.1| ferredoxin [Acinetobacter junii SH205] Length = 82 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T CI C C+ CP + YEG I + C +C C CP+D Sbjct: 1 MALMITTACINCDM--CLPECPNEAIYEGAKIYEIDTERCTECVGFYDAPTCIAVCPIDC 58 Query: 55 IKPD 58 +KPD Sbjct: 59 VKPD 62 >gi|258625037|ref|ZP_05719958.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM603] gi|258582670|gb|EEW07498.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM603] Length = 553 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|227874303|ref|ZP_03992490.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Oribacterium sinus F0268] gi|227839854|gb|EEJ50297.1| NADH dehydrogenase (ubiquinone), RnfC subunit [Oribacterium sinus F0268] Length = 457 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 14/77 (18%) Query: 6 TENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV CP + E F ++ ECI+CG C CP A Sbjct: 373 TTPCINCGR--CVTACPENLMPTLMMVASLQKNTERFEKLYGMECIECGCCSYVCP--AK 428 Query: 56 KPDTEPGLELWLKINSE 72 +P T+ ++ K+N+E Sbjct: 429 RPLTQGFKQMKRKVNAE 445 >gi|147677243|ref|YP_001211458.1| ferredoxin [Pelotomaculum thermopropionicum SI] gi|146273340|dbj|BAF59089.1| ferredoxin [Pelotomaculum thermopropionicum SI] Length = 60 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPV--DCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V +E CI C C VCP + F E +HP+ C++CG C CP +I+ Sbjct: 4 VVNSETCIGCA--TCQSVCPATPNVFEVKEVSAVVHPEACLECGTCVENCPTGSIR 57 >gi|301060755|ref|ZP_07201570.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300445152|gb|EFK09102.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 254 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 Y+ E C C C CPVD G+N + I ++CI CG C CP Sbjct: 176 YIDPEKCKAC--MICARSCPVDAIVGGKNLIHVIDQEKCIKCGTCFEACP 223 >gi|262277293|ref|ZP_06055086.1| NADH-quinone oxidoreductase subunit i [alpha proteobacterium HIMB114] gi|262224396|gb|EEY74855.1| NADH-quinone oxidoreductase subunit i [alpha proteobacterium HIMB114] Length = 161 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 18 VEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI ++EP Sbjct: 37 FEKGPISPRFRGEHALRRYPNGEERCIACKLCEAACPAQAITIESEP 83 >gi|227355510|ref|ZP_03839905.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|227164306|gb|EEI49195.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 205 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ E+ F+ ++ + CI C C CP A + D Sbjct: 59 FAYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQFDE 118 Query: 60 EPG 62 G Sbjct: 119 VKG 121 >gi|220917911|ref|YP_002493215.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955765|gb|ACL66149.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 490 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C+ C+ C CP Y N + + D CI CG C CP A Sbjct: 59 CMQCEAHPCTVDCPSGATYVDANGVVVVDADVCIGCGTCVAACPYGA 105 >gi|152993080|ref|YP_001358801.1| molybdopterin oxidoreductase, iron sulfur subunit [Sulfurovum sp. NBC37-1] gi|151424941|dbj|BAF72444.1| molybdopterin oxidoreductase, iron sulfur subunit [Sulfurovum sp. NBC37-1] Length = 535 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECP--VDAIKPD 58 +C C +C+ CP + + + +N + H D CI C C CP V PD Sbjct: 95 SCNHCIDPECLRGCPTESYIKLDNGIVWHDDPSCIGCQYCTWNCPYEVPVFNPD 148 >gi|154496500|ref|ZP_02035196.1| hypothetical protein BACCAP_00792 [Bacteroides capillosus ATCC 29799] gi|150274133|gb|EDN01224.1| hypothetical protein BACCAP_00792 [Bacteroides capillosus ATCC 29799] Length = 214 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E CI C+ C VCPV+C G I C+ CG C CPV A++ Sbjct: 155 IIPEKCIGCQ--GCRSVCPVNCI-SGTIPRNIDTAHCLHCGNCLSICPVGAVE 204 >gi|158320076|ref|YP_001512583.1| indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] gi|158140275|gb|ABW18587.1| Indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] Length = 605 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCF--YEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 YV E CI C+ C++ CP YEG L +I PD C+ C +C CPV+AIK Sbjct: 536 YVDPEICISCR--SCIKTNCPPLKMKKYEGIEKLKSSIDPDMCVGCSICAQVCPVNAIK 592 >gi|78222780|ref|YP_384527.1| Iron-sulfur cluster-binding protein [Geobacter metallireducens GS-15] gi|78194035|gb|ABB31802.1| Iron-sulfur cluster-binding protein [Geobacter metallireducens GS-15] Length = 320 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 23/40 (57%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 DC + D ++G + ++ DECI CG+C+ C DAI Sbjct: 149 DCPKSATNDVGFQGAIWPVLYADECIGCGLCDKSCTEDAI 188 >gi|302390736|ref|YP_003826557.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosediminibacter oceani DSM 16646] gi|302201364|gb|ADL08934.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosediminibacter oceani DSM 16646] Length = 383 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C CV+VCP ++ + I C+ CG C CP A+ Sbjct: 195 IKARCIRCGQ--CVDVCPHKSLQLVDDSIVIDKTVCVKCGRCARVCPEKAL 243 >gi|291166809|gb|EFE28855.1| iron-sulfur cluster-binding protein [Filifactor alocis ATCC 35896] Length = 288 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE C CK CV CPV+ F +N + + P CI C C +CP A+ P + Sbjct: 211 TEKCTGCKR--CVAACPVNMFAYIDNTIQMVRDPKYCILCAECYHQCPAKAV---VHPYI 265 Query: 64 ELWLK 68 E+ K Sbjct: 266 EVARK 270 >gi|270261663|ref|ZP_06189936.1| transporter [Serratia odorifera 4Rx13] gi|270045147|gb|EFA18238.1| transporter [Serratia odorifera 4Rx13] Length = 190 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 107 VAYIDEANCIGC--TKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE 161 >gi|224541365|ref|ZP_03681904.1| hypothetical protein CATMIT_00525 [Catenibacterium mitsuokai DSM 15897] gi|224525699|gb|EEF94804.1| hypothetical protein CATMIT_00525 [Catenibacterium mitsuokai DSM 15897] Length = 345 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C C +CP C + I +C+ CG C CPV AI+ Sbjct: 144 YTITDRCIHC--GKCETICPQRCIHNE----VIDVAQCLHCGACLEICPVQAIE 191 >gi|221195371|ref|ZP_03568426.1| putative ferredoxin [Atopobium rimae ATCC 49626] gi|221184558|gb|EEE16950.1| putative ferredoxin [Atopobium rimae ATCC 49626] Length = 426 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C EVCPVD ++I + CI CG+C+ CP + Sbjct: 72 CQEVCPVDAIDIHNQTVSI-AEHCIQCGLCDSVCPTE 107 >gi|163849670|ref|YP_001637713.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|163661275|gb|ABY28642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] Length = 936 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 760 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 803 >gi|20454185|gb|AAM22202.1|AF501325_1 putative ferredoxin 2[4Fe-4S] [Mastigamoeba balamuthi] Length = 63 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 7 ENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++CI C+ CV CPV F + +F+A DEC+ C C CPV AI Sbjct: 11 DDCIGCQ--ACVGACPVGLFEMKNDKSHFIAARKDECVHCESCIAACPVTAIS 61 >gi|57234310|ref|YP_181645.1| iron-sulfur cluster-binding protein [Dehalococcoides ethenogenes 195] gi|57224758|gb|AAW39815.1| iron-sulfur cluster-binding protein [Dehalococcoides ethenogenes 195] Length = 136 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 5 VTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIK 56 VT N C H CV +CPVD F E+ I+ D +CI CG+C CP A++ Sbjct: 79 VTRNENRCTHCGACVTMCPVDAFSIDEDNREINFDAKKCIVCGICIQACPPRAME 133 >gi|18977042|ref|NP_578399.1| putative ATPase RIL [Pyrococcus furiosus DSM 3638] gi|18892677|gb|AAL80794.1| RNase l inhibitor [Pyrococcus furiosus DSM 3638] Length = 590 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD------CFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C H C VCPV+ + EN+ I C CG+C +CP AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKCPFKAI 66 >gi|333001063|gb|EGK20633.1| formate hydrogenlyase subunit 6 [Shigella flexneri K-272] gi|333015432|gb|EGK34771.1| formate hydrogenlyase subunit 6 [Shigella flexneri K-227] Length = 180 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE + CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLPTGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 FELAVWKK 103 >gi|295106564|emb|CBL04107.1| Fe-S-cluster-containing hydrogenase components 2 [Gordonibacter pamelaeae 7-10-1-b] Length = 207 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 22/52 (42%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C+ C+ VCP Y+ + L + C C VC CP A+ P Sbjct: 50 TCHQCEGAPCLAVCPEGAIYQERDRLQVDEARCTGCLVCALACPFGAVYPSA 101 >gi|218262081|ref|ZP_03476678.1| hypothetical protein PRABACTJOHN_02350 [Parabacteroides johnsonii DSM 18315] gi|218223610|gb|EEC96260.1| hypothetical protein PRABACTJOHN_02350 [Parabacteroides johnsonii DSM 18315] Length = 458 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C H C+ CP E +I C+DCG C CP +AI Sbjct: 15 DRCVGCTH--CMTKCPTGAIRIREGKASIRKGWCVDCGECLKACPAEAI 61 >gi|154492558|ref|ZP_02032184.1| hypothetical protein PARMER_02192 [Parabacteroides merdae ATCC 43184] gi|154087783|gb|EDN86828.1| hypothetical protein PARMER_02192 [Parabacteroides merdae ATCC 43184] Length = 529 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDCF----YEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 C E CP Y+G I+PD CI CG CE CPV ++ Sbjct: 454 CAEHCPTQAVHMVPYKGTLTIPQINPDLCIGCGGCESICPVRPMR 498 >gi|27904612|ref|NP_777738.1| electron transport complex protein RnfB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|33301646|sp|Q89AW9|RNFB_BUCBP RecName: Full=Electron transport complex protein rnfB gi|27904009|gb|AAO26843.1| electron transport complex protein RnfB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 169 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Query: 1 MTYVVTE----NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E NC+ C + C VCPVD NF + D C C +C P CP + I Sbjct: 104 VTYSIVEIDENNCVGC--SKCRLVCPVDAVVGTYNFRHTVLIDSCTGCNLCIPLCPTNCI 161 Query: 56 K 56 K Sbjct: 162 K 162 >gi|113970402|ref|YP_734195.1| electron transport complex protein RnfB [Shewanella sp. MR-4] gi|123324999|sp|Q0HIH9|RNFB_SHESM RecName: Full=Electron transport complex protein rnfB gi|113885086|gb|ABI39138.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. MR-4] Length = 193 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTADCTGCDLCVEPCPVDCI 159 >gi|126090183|ref|YP_001041664.1| electron transport complex protein RnfB [Shewanella baltica OS155] gi|126174476|ref|YP_001050625.1| electron transport complex protein RnfB [Shewanella baltica OS155] gi|125997681|gb|ABN61756.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS155] gi|125999839|gb|ABN63909.1| hypothetical protein Sbal_4546 [Shewanella baltica OS155] Length = 199 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK--P 57 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I P Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTTDCTGCDLCVEPCPVDCIDMIP 163 Query: 58 DTEPGLELW 66 T P L+ W Sbjct: 164 VT-PNLKNW 171 >gi|46125447|ref|XP_387277.1| hypothetical protein FG07101.1 [Gibberella zeae PH-1] Length = 607 Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 11/66 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDE---------CIDCGVCEPE 49 +T + N C+ C + C C G+ + + P+ CI CG+C Sbjct: 5 LTRIAIVNSDKCRPRKCRQECKKSCPVVRSGKLCIEVQPESKLAFISESLCIGCGICPKR 64 Query: 50 CPVDAI 55 CP DAI Sbjct: 65 CPFDAI 70 >gi|297518377|ref|ZP_06936763.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli OP50] Length = 173 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 ++C C H CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 40 KSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTK 97 >gi|92115052|ref|YP_574980.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91798142|gb|ABE60281.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 82 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 16/23 (69%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI P E Sbjct: 7 DECINCDVCEPECPNGAISPGEE 29 >gi|114563344|ref|YP_750857.1| electron transport complex protein RnfB [Shewanella frigidimarina NCIMB 400] gi|114334637|gb|ABI72019.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella frigidimarina NCIMB 400] Length = 193 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 107 VAYIREDECIGC--TKCIQACPVDAILGAGKLMHTVIAKDCTGCDLCVEPCPVDCI 160 >gi|293603975|ref|ZP_06686388.1| NADH:ubiquinone oxidoreductase subunit RnfB [Achromobacter piechaudii ATCC 43553] gi|292817579|gb|EFF76647.1| NADH:ubiquinone oxidoreductase subunit RnfB [Achromobacter piechaudii ATCC 43553] Length = 214 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +CI C T C++ CPVD + + D C C +C CPVD I+ P Sbjct: 84 SHCIGC--TLCIQACPVDAIVGANKHMHTVLADWCTGCDLCVAPCPVDCIQ--MVPAGRS 139 Query: 66 WLKINSEYATQW-PNITTKKESLPS 89 W + ++ + Q N + E L S Sbjct: 140 WTEQDAAISRQRHRNHLARAERLAS 164 >gi|260655742|ref|ZP_05861211.1| conserved domain protein [Jonquetella anthropi E3_33 E1] gi|260629358|gb|EEX47552.1| conserved domain protein [Jonquetella anthropi E3_33 E1] Length = 56 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M VV ++ C+ C+ CV CPV+ ++ ++P+ C++CG C CP +AI Sbjct: 1 MAAVVNKDMCVGCET--CVGTCPVEAISMADDKAVVNPEVCVECGACVSACPSEAI 54 >gi|291284040|ref|YP_003500858.1| Electron transport protein hydN [Escherichia coli O55:H7 str. CB9615] gi|209761974|gb|ACI79299.1| electron transport protein HydN [Escherichia coli] gi|290763913|gb|ADD57874.1| Electron transport protein hydN [Escherichia coli O55:H7 str. CB9615] gi|320662296|gb|EFX29693.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O55:H7 str. USDA 5905] Length = 175 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 24/56 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C+ C VCP G+ F+ + + CI C C CP A++ P + Sbjct: 58 CRQCEDAPCANVCPNGAISRGKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIR 113 >gi|212635176|ref|YP_002311701.1| electron transport complex protein RnfB [Shewanella piezotolerans WP3] gi|226735433|sp|B8CM57|RNFB_SHEPW RecName: Full=Electron transport complex protein rnfB gi|212556660|gb|ACJ29114.1| Electron transport complex, RnfABCDGE type, B subunit [Shewanella piezotolerans WP3] Length = 189 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAFIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|188579304|ref|YP_001922749.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|179342802|gb|ACB78214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] Length = 936 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 760 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 803 >gi|157370480|ref|YP_001478469.1| electron transport complex protein RnfB [Serratia proteamaculans 568] gi|166991045|sp|A8GE01|RNFB_SERP5 RecName: Full=Electron transport complex protein rnfB gi|157322244|gb|ABV41341.1| electron transport complex, RnfABCDGE type, B subunit [Serratia proteamaculans 568] Length = 190 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 107 VAYIDEANCIGC--TKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE 161 >gi|257075574|ref|ZP_05569935.1| ferredoxin [Ferroplasma acidarmanus fer1] Length = 69 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CV +CP D E +AI+ D+CI C C CP AI + Sbjct: 22 CVGMCPTDAINLDETVIAINEDKCIKCEFCVIGCPTGAISAE 63 >gi|33596549|ref|NP_884192.1| putative iron-sulfur binding protein [Bordetella parapertussis 12822] gi|33566318|emb|CAE37231.1| putative iron-sulfur binding protein [Bordetella parapertussis] Length = 705 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V ++ C LC CV CP + + L + C+ CG+C CP +AI Sbjct: 571 VDSDACTLC--MSCVSACPSNALLDNPQSPQLRMVEKNCVQCGLCATTCPENAI 622 >gi|317492085|ref|ZP_07950516.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919968|gb|EFV41296.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] Length = 202 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVVSDLCTGCNLCVAPCPTDCI 162 >gi|229826121|ref|ZP_04452190.1| hypothetical protein GCWU000182_01486 [Abiotrophia defectiva ATCC 49176] gi|229789694|gb|EEP25808.1| hypothetical protein GCWU000182_01486 [Abiotrophia defectiva ATCC 49176] Length = 507 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP C I D CI CG C CP A+ P Sbjct: 117 VTDGCQGCLAHPCVEVCPKTCVSLDRTNGRSKIDQDVCIKCGKCAEVCPYHAVIIQERP 175 >gi|146329455|ref|YP_001209464.1| electron transport complex protein, B subunit [Dichelobacter nodosus VCS1703A] gi|146232925|gb|ABQ13903.1| electron transport complex protein, B subunit [Dichelobacter nodosus VCS1703A] Length = 189 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++V + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 107 VAWIVEDWCIGC--TRCIQACPVDAIVGSTQRMHTVLSAECTGCELCIAPCPVDCI 160 >gi|145589679|ref|YP_001156276.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048085|gb|ABP34712.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 230 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDEC-IDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 89 VAFIDPQKCIGC--TLCIQACPVDAIIGASKQMHVVLDACCTGCDLCIPPCPVDCI 142 >gi|89892418|gb|ABD78998.1| HI1046-like protein [Haemophilus influenzae] Length = 122 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ + F+ ++ + CI C C CP DA + D Sbjct: 59 FAYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDA 118 Query: 60 E 60 + Sbjct: 119 Q 119 >gi|78044396|ref|YP_359648.1| formate dehydrogenase-O, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996511|gb|ABB15410.1| formate dehydrogenase-O, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 260 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTE 60 + C C C + CP D Y + + D CI C C+ CP + + DT+ Sbjct: 70 QQCFHCGDAACEKACPEDAIYHTKEGAVVRDYDRCIGCDYCQRACPFNIPRIDTQ 124 >gi|219670276|ref|YP_002460711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540536|gb|ACL22275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 271 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C++ C + + E F I D+CI CG C CP D + D Sbjct: 73 QCFHCADAACLKACSSEAISKTETGFTIIDEDKCIGCGYCVTNCPFDIPRID 124 >gi|323498655|ref|ZP_08103647.1| hypothetical protein VISI1226_02972 [Vibrio sinaloensis DSM 21326] gi|323316353|gb|EGA69372.1| hypothetical protein VISI1226_02972 [Vibrio sinaloensis DSM 21326] Length = 229 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACP 143 >gi|317491443|ref|ZP_07949879.1| dimethylsulfoxide reductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920990|gb|EFV42313.1| dimethylsulfoxide reductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 205 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ ++ + CI C C CP A + + Sbjct: 59 FAYYLSISCNHCSDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNE 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|299138041|ref|ZP_07031221.1| DMSO reductase anchor subunit (DmsC) [Acidobacterium sp. MP5ACTX8] gi|298599971|gb|EFI56129.1| DMSO reductase anchor subunit (DmsC) [Acidobacterium sp. MP5ACTX8] Length = 532 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 + ++ C C +C++ CPVD + + + +H D CI C C CP + + E Sbjct: 99 FYLSMGCNHCLSAECIKGCPVDAYTKDSITGIVLHSADACIGCQYCVWNCPYSVPQFNPE 158 Query: 61 PGL 63 G+ Sbjct: 159 RGV 161 >gi|300087162|ref|YP_003757684.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526895|gb|ADJ25363.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 265 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEPGL 63 V++ C+ C CV VCPV ++ N + + +CI C C+ CP D K + + Sbjct: 66 VSKRCLHCFSPACVSVCPVGALHKEANGAVVWEEGKCIGCRYCQNACPFDIPKFEWD--- 122 Query: 64 ELWLKIN 70 E W KI+ Sbjct: 123 EPWPKIS 129 >gi|322419902|ref|YP_004199125.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320126289|gb|ADW13849.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter sp. M18] Length = 255 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 19/89 (21%) Query: 9 CILCKHTDCVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD- 58 C+ C + CV CPV + G + ++ +CI CG C P CP A D Sbjct: 80 CMQCDNPPCVAACPVKGADGATWKETKGIGNGIVLVNYAKCIGCGKCVPACPYSARTMDN 139 Query: 59 ----TEPGLELWLKINS----EYATQWPN 79 TE G +L +K + EY WP Sbjct: 140 GSFHTEGGPQL-MKYETLPSFEYGRNWPR 167 >gi|168186747|ref|ZP_02621382.1| polyferredoxin [Clostridium botulinum C str. Eklund] gi|169295268|gb|EDS77401.1| polyferredoxin [Clostridium botulinum C str. Eklund] Length = 294 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + + CI C C + CP D N I +C++CG+C +CP AI+ +P Sbjct: 211 ICSTGCIGCGL--CAKACPKDAITMENNLPVIDYSKCVNCGLCAMKCPTKAIQNFRKP 266 >gi|10802771|gb|AAG23607.1|AF244658_1 carbon monoxide dehydrogenase [Carboxydothermus hydrogenoformans] Length = 128 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CK C+E P FY+ E + ++C CG+CE CP AI+ Sbjct: 58 RQCKHCKRAKCIEAYPQGALFYDEEGRVVCSEEKCTGCGLCEKACPFHAIR 108 >gi|89895846|ref|YP_519333.1| formate dehydrogenase beta subunit [Desulfitobacterium hafniense Y51] gi|89335294|dbj|BAE84889.1| formate dehydrogenase beta subunit [Desulfitobacterium hafniense Y51] Length = 271 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C++ C + + E F I D+CI CG C CP D + D Sbjct: 73 QCFHCADAACLKACSSEAISKTETGFTIIDEDKCIGCGYCVTNCPFDIPRID 124 >gi|56476886|ref|YP_158475.1| electron transport complex protein RnfB [Aromatoleum aromaticum EbN1] gi|56312929|emb|CAI07574.1| Electron transport complex protein RnfB [Aromatoleum aromaticum EbN1] Length = 176 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP-GLE 64 E CI C T C++VCP D G + + D C CG C CP +A+ P L+ Sbjct: 108 EICIGC--TRCIKVCPTDAILGGPKQIHNVLRDACTGCGSCIERCPTEAMAMQPLPVTLQ 165 Query: 65 LWL 67 W+ Sbjct: 166 QWV 168 >gi|307594818|ref|YP_003901135.1| methyl-viologen-reducing hydrogenase subunit delta [Vulcanisaeta distributa DSM 14429] gi|307550019|gb|ADN50084.1| methyl-viologen-reducing hydrogenase delta subunit [Vulcanisaeta distributa DSM 14429] Length = 1226 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 14/74 (18%) Query: 17 CVEVCPVDCFY--------EGENFLAIHPD---ECIDCGVCEPECPVDAIKPDTEPGLEL 65 CV+ CP+ G +++ I P +C+ CG+CE CP +AI + E + + Sbjct: 31 CVKRCPMGILELTREEVNPRGYHYVRIKPGKEVDCVACGICEKVCPTNAIYVEHEEEITI 90 Query: 66 ---WLKINSEYATQ 76 +KI+ TQ Sbjct: 91 KDYLMKIDKTKVTQ 104 >gi|301631691|ref|XP_002944931.1| PREDICTED: ferredoxin-like [Xenopus (Silurana) tropicalis] Length = 85 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|262274542|ref|ZP_06052353.1| electron transport complex protein RnfB [Grimontia hollisae CIP 101886] gi|262221105|gb|EEY72419.1| electron transport complex protein RnfB [Grimontia hollisae CIP 101886] Length = 194 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ ++CI C T C++ CPVD + + DEC C +C CP D I+ Sbjct: 106 VAFIHEDDCIGC--TKCIQACPVDAIVGSTKAMHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|257790423|ref|YP_003181029.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474320|gb|ACV54640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 207 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECP 51 ++ ++ +C+ C+ C++VCP + + ++PD CI C C CP Sbjct: 84 SFFISTSCMHCEDPSCMKVCPAGAISKDAHGIVKVNPDVCIGCKYCFQACP 134 >gi|238758248|ref|ZP_04619427.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia aldovae ATCC 35236] gi|238703578|gb|EEP96116.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia aldovae ATCC 35236] Length = 172 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 26 FAYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDE 85 Query: 60 EPG 62 G Sbjct: 86 AKG 88 >gi|145508706|ref|XP_001440297.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145535448|ref|XP_001453457.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407514|emb|CAK72900.1| unnamed protein product [Paramecium tetraurelia] gi|124421179|emb|CAK86060.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +C+ CP AI +TEP Sbjct: 112 EKGPLSPLFRGEHALRRYPTGEERCIACKLCQSACPARAITIETEP 157 >gi|124485356|ref|YP_001029972.1| hypothetical protein Mlab_0531 [Methanocorpusculum labreanum Z] gi|124362897|gb|ABN06705.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanocorpusculum labreanum Z] Length = 367 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ + CI+C C+ CP C ++I D CI C +C CP AI D + Sbjct: 189 ILEDKCIVCGA--CMNACPEFCISIAGKAVSIDLDHCIGCLMCMNTCPEHAIDLDWKDDG 246 Query: 64 ELWLKINSEYATQWPNITTKK 84 ++++ EYA T K Sbjct: 247 VVFVERMIEYAAGAVGNKTGK 267 >gi|24374053|ref|NP_718096.1| electron transport complex protein RnfB [Shewanella oneidensis MR-1] gi|81744759|sp|Q8EE80|RNFB_SHEON RecName: Full=Electron transport complex protein rnfB gi|24348528|gb|AAN55540.1|AE015693_2 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 193 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTADCTGCDLCVEPCPVDCI 159 >gi|20090344|ref|NP_616419.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19915348|gb|AAM04899.1| ferredoxin [Methanosarcina acetivorans C2A] Length = 102 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 22/40 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VCP E ++ + CI CG+C+ CPV AI+ Sbjct: 60 CVGVCPKGALELVETWIEVDESTCIKCGICDRICPVGAIE 99 >gi|56477090|ref|YP_158679.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] gi|56313133|emb|CAI07778.1| putative iron-sulfur binding protein [Aromatoleum aromaticum EbN1] Length = 689 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V++ C LC CV CP + L C+ CG+C CP +A+ Sbjct: 553 VSDACTLC--MSCVSACPSGALSAASDAMRLGFIEKSCVQCGLCASSCPENAV 603 >gi|119716585|ref|YP_923550.1| putative glutamate synthase (NADPH) small subunit [Nocardioides sp. JS614] gi|119537246|gb|ABL81863.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 544 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIK 56 NC C +C VCP + + + I D C CG+C ECP AI+ Sbjct: 489 NCFSCD--NCFGVCPDNAITKTGDPDTPYLIDLDYCKGCGLCAAECPAGAIR 538 >gi|308274768|emb|CBX31367.1| hypothetical protein N47_E48790 [uncultured Desulfobacterium sp.] Length = 943 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C+ C CV CP D F + + I +C CGVC CP AI+ + Sbjct: 872 TEHCVKC--LTCVRSCPFDVPVFNIEKQIIEIDDAKCQGCGVCASVCPRQAIQLNYYEDN 929 Query: 64 ELWLKINSEYA 74 ++ KI++ A Sbjct: 930 QITSKIDALLA 940 >gi|258405352|ref|YP_003198094.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797579|gb|ACV68516.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 189 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIH-PDECIDCGVCEPECPVDA 54 C C++ C+ VCPV +Y+ E+ + +H D+CI CG C CP A Sbjct: 59 CNHCENPTCLNVCPVKAYYKREEDGIVVHEQDKCIGCGNCIRSCPYGA 106 >gi|145541694|ref|XP_001456535.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424347|emb|CAK89138.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +C+ CP AI +TEP Sbjct: 112 EKGPLSPLFRGEHALRRYPTGEERCIACKLCQSACPARAITIETEP 157 >gi|145536107|ref|XP_001453781.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421514|emb|CAK86384.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +C+ CP AI +TEP Sbjct: 112 EKGPLSPLFRGEHALRRYPTGEERCIACKLCQSACPARAITIETEP 157 >gi|51894426|ref|YP_077117.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] gi|51858115|dbj|BAD42273.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] Length = 199 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 I C+H + C CPV + + + + CI C C CP A+ D P LE Sbjct: 59 IQCRHCEDAPCANACPVGAIVRQDGVVLVKQERCIGCKTCVLACPFGAM--DMVPALENG 116 Query: 67 LKI 69 ++ Sbjct: 117 ARV 119 >gi|114047406|ref|YP_737956.1| electron transport complex protein RnfB [Shewanella sp. MR-7] gi|123030634|sp|Q0HVF6|RNFB_SHESR RecName: Full=Electron transport complex protein rnfB gi|113888848|gb|ABI42899.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. MR-7] Length = 193 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTADCTGCDLCVEPCPVDCI 159 >gi|288930758|ref|YP_003434818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893006|gb|ADC64543.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 59 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 23/40 (57%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VC D E +L I+PD+C C VC CP+ A++ Sbjct: 17 CVSVCKFDANELVETYLEIYPDKCTLCMVCVKTCPMGALE 56 >gi|251792885|ref|YP_003007611.1| electron transport protein HydN [Aggregatibacter aphrophilus NJ8700] gi|247534278|gb|ACS97524.1| electron transport protein HydN [Aggregatibacter aphrophilus NJ8700] Length = 199 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ILC+H D C VCPV + + ++ CI C +C CP AI Sbjct: 49 ILCRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|258405526|ref|YP_003198268.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797753|gb|ACV68690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 92 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 17 CVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CV CP E A +HP+ECI+CG CE CP AI + G E Sbjct: 25 CVAFCPGKVLELNEQGKAEVVHPEECINCGFCELHCPDFAIVVTPKEGAE 74 >gi|204926813|ref|ZP_03218015.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323478|gb|EDZ08673.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 223 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|154492142|ref|ZP_02031768.1| hypothetical protein PARMER_01774 [Parabacteroides merdae ATCC 43184] gi|154087367|gb|EDN86412.1| hypothetical protein PARMER_01774 [Parabacteroides merdae ATCC 43184] Length = 458 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C H C+ CP E +I C+DCG C CP +AI Sbjct: 15 DRCVGCTH--CMTKCPTGAIRIREGKASIRKGWCVDCGECLKACPTEAI 61 >gi|254361778|ref|ZP_04977913.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] gi|153093313|gb|EDN74309.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] Length = 205 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V+ + CI C T C++ CPVD + I PD C C +C CP + I+ Sbjct: 108 VAFVIEDLCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNCIE 162 >gi|152983310|ref|YP_001354824.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151283387|gb|ABR91797.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 87 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|84489476|ref|YP_447708.1| glutamate synthase subunit 2 [Methanosphaera stadtmanae DSM 3091] gi|84372795|gb|ABC57065.1| putative glutamate synthase, subunit 2 with ferredoxin domain [Methanosphaera stadtmanae DSM 3091] Length = 492 Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 11 LCKHT-DCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 LCK+ C CP D YE + +H + C+ C +CE CP +AI Sbjct: 33 LCKNCYSCYSNCPHDV-YEIINDEPQPVHKENCVGCKICEQMCPTNAI 79 >gi|83589316|ref|YP_429325.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572230|gb|ABC18782.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 231 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VVT C+ C C VCP + + + + +CI C C+ CP DA + + G Sbjct: 53 VVTTQCMHCDDPPCARVCPTGATQKRPDGIVIVDESKCIGCRYCQSACPYDARSFNPQRG 112 Query: 63 L 63 + Sbjct: 113 I 113 >gi|127512995|ref|YP_001094192.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella loihica PV-4] gi|166225086|sp|A3QEN5|RNFB_SHELP RecName: Full=Electron transport complex protein rnfB gi|126638290|gb|ABO23933.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella loihica PV-4] Length = 189 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 106 VAFIREAECIGC--TKCIQACPVDAILGTGKQMHTVITDYCTGCDLCVEPCPVDCI 159 >gi|330935903|ref|XP_003305174.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] gi|311317931|gb|EFQ86730.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] Length = 230 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 27/105 (25%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 N+EYAT+ T++E L + K+ K+E Sbjct: 187 EGP----------NAEYATE-----TREELLYNKEKLLANGDKWE 216 >gi|303244116|ref|ZP_07330454.1| Glutamate synthase (NADPH) [Methanothermococcus okinawensis IH1] gi|302485501|gb|EFL48427.1| Glutamate synthase (NADPH) [Methanothermococcus okinawensis IH1] Length = 510 Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+LC+ CV C F N + + + C C C CP DAI P Sbjct: 17 ERCMLCER--CVNQCSWGVFRRDGNRIITYSNRCGACQRCVSMCPRDAITIHENP 69 >gi|269963060|ref|ZP_06177396.1| iron-sulfur cluster-binding protein [Vibrio harveyi 1DA3] gi|269832192|gb|EEZ86315.1| iron-sulfur cluster-binding protein [Vibrio harveyi 1DA3] Length = 553 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 +++C LC CV VCP + +GE+ L +CI CG+CE CP Sbjct: 417 SKDCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCEKACP 462 >gi|269215798|ref|ZP_06159652.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] gi|269130748|gb|EEZ61824.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] Length = 206 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDE-CIDCGVCEPECPVDAIKPDT 59 T+ ++ C C + CV VCPV Y + E+ H DE CI C +C CP P Sbjct: 65 TFHLSMTCNNCANPACVAVCPVGAMYIDEEDGTTQHDDEMCIGCQMCINACPYGV--PKF 122 Query: 60 EPGLELWLKINS 71 + GL + K +S Sbjct: 123 DDGLSISRKCDS 134 >gi|256830133|ref|YP_003158861.1| glycyl-radical enzyme activating family protein [Desulfomicrobium baculatum DSM 4028] gi|256579309|gb|ACU90445.1| glycyl-radical enzyme activating protein family [Desulfomicrobium baculatum DSM 4028] Length = 306 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V + C+ C +CVE CP G + + + D C CGVC CP A Sbjct: 56 VPDKCVGCG--ECVEACPQGALSPGPDGMLRNQDACTACGVCAEVCPALA 103 >gi|218779495|ref|YP_002430813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760879|gb|ACL03345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 361 Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C+ C++ CP G++ + + D C C C CPV+AI ++PG Sbjct: 287 CTACE--TCIDRCPPQALSMGDDDVPEVDLDLCFGCAACATGCPVEAISMVSKPGF 340 >gi|117920613|ref|YP_869805.1| electron transport complex protein RnfB [Shewanella sp. ANA-3] gi|166225087|sp|A0KX80|RNFB_SHESA RecName: Full=Electron transport complex protein rnfB gi|117612945|gb|ABK48399.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. ANA-3] Length = 193 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTADCTGCDLCVEPCPVDCI 159 >gi|332883767|gb|EGK04047.1| hypothetical protein HMPREF9456_01075 [Dysgonomonas mossii DSM 22836] Length = 514 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 14/78 (17%) Query: 17 CVEVCPVDCF----YEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C E CP YEG L I PD C+ CG CE CPV P ++++ Sbjct: 437 CAEHCPTQAVTMIPYEGHEGLTIPFITPDICVGCGGCEYICPV-------RPYRAIYVEG 489 Query: 70 NSEYATQWPNITTKKESL 87 N E+ + KKE + Sbjct: 490 NKEHKQRKAFKEEKKEDV 507 >gi|323700274|ref|ZP_08112186.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio sp. ND132] gi|323460206|gb|EGB16071.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio desulfuricans ND132] Length = 704 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 17 CVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECP 51 CV CP D + G E I P+ C CG C CP Sbjct: 144 CVRACPFDAIHMGPEGLPVIDPNRCKACGNCVDACP 179 >gi|322615434|gb|EFY12354.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618494|gb|EFY15383.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622094|gb|EFY18944.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627165|gb|EFY23957.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631125|gb|EFY27889.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637657|gb|EFY34358.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642468|gb|EFY39069.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643657|gb|EFY40211.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648271|gb|EFY44731.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654683|gb|EFY51003.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659643|gb|EFY55886.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662148|gb|EFY58364.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666106|gb|EFY62284.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672526|gb|EFY68637.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675955|gb|EFY72026.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680440|gb|EFY76478.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684666|gb|EFY80670.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194656|gb|EFZ79847.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323201742|gb|EFZ86806.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206256|gb|EFZ91218.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213267|gb|EFZ98069.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215638|gb|EGA00382.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222060|gb|EGA06446.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227927|gb|EGA12081.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229096|gb|EGA13225.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236294|gb|EGA20370.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237586|gb|EGA21647.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241748|gb|EGA25777.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248105|gb|EGA32042.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254565|gb|EGA38376.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258375|gb|EGA42052.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259655|gb|EGA43289.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265928|gb|EGA49424.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270370|gb|EGA53818.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 223 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|296283848|ref|ZP_06861846.1| NADH dehydrogenase subunit I [Citromicrobium bathyomarinum JL354] Length = 161 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE---------NFLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIESEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 N EY+T+ T++E L AK+ K+E+ + N Sbjct: 118 EGP----------NFEYSTE-----TREELLYDKAKLLANGDKWERAIAAN 153 >gi|296133322|ref|YP_003640569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031900|gb|ADG82668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 272 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 + C+ C C +VCP + F+ E + + ++CI CG C CP Sbjct: 70 LKRQCMHCTEAACEKVCPENAIFHTAEGAVVVDREKCIGCGYCAQYCP 117 >gi|261211018|ref|ZP_05925308.1| NrfC protein [Vibrio sp. RC341] gi|260839993|gb|EEX66593.1| NrfC protein [Vibrio sp. RC341] Length = 212 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 81 KSCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACP 127 >gi|253577805|ref|ZP_04855077.1| CoB-CoM heterodisulfide reductase subunit A [Ruminococcus sp. 5_1_39B_FAA] gi|251850123|gb|EES78081.1| CoB-CoM heterodisulfide reductase subunit A [Ruminococcus sp. 5_1_39BFAA] Length = 662 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 25/47 (53%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNI 80 +++ D+C CGVC+ +CP I + GL I + +A PN+ Sbjct: 237 SVNMDKCTGCGVCQEKCPSKKIPNEFNRGLNNRTAIYTPFAQAIPNV 283 >gi|237737513|ref|ZP_04567994.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium mortiferum ATCC 9817] gi|229419393|gb|EEO34440.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium mortiferum ATCC 9817] Length = 592 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 9/59 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG----ENFLAIHPDECIDCGVCEPECPVDAI 55 +TYV+T+ C C T C VC V EG ++F I P++C+ CG C C AI Sbjct: 536 ITYVITDACRGC--TACTRVCAVKAI-EGNIKEKHF--IDPEKCVRCGACISACRFGAI 589 >gi|217967308|ref|YP_002352814.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] gi|217336407|gb|ACK42200.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] Length = 596 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E C C + C CPV Y+ E+ I +C CG+C CP AIK + Sbjct: 543 VIREECRKC--SICFRNCPVGAIYKDEDGTYVIDQSKCTKCGICFQVCPFSAIKKE 596 >gi|149908584|ref|ZP_01897246.1| tetrathionate reductase, subunit B [Moritella sp. PE36] gi|149808418|gb|EDM68355.1| tetrathionate reductase, subunit B [Moritella sp. PE36] Length = 257 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 ++ + C C++ CV+VCPV ++ E+ + + +E C+ C C CP DA Sbjct: 104 SFTLPRLCNHCENPPCVKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 157 >gi|153832369|ref|ZP_01985036.1| iron-sulfur cluster-binding protein [Vibrio harveyi HY01] gi|156974556|ref|YP_001445463.1| ferredoxin [Vibrio harveyi ATCC BAA-1116] gi|148871398|gb|EDL70261.1| iron-sulfur cluster-binding protein [Vibrio harveyi HY01] gi|156526150|gb|ABU71236.1| hypothetical protein VIBHAR_02274 [Vibrio harveyi ATCC BAA-1116] Length = 553 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 +++C LC CV VCP + +GE+ L +CI CG+CE CP Sbjct: 417 SKDCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCEKACP 462 >gi|332296916|ref|YP_004438838.1| methyl-accepting chemotaxis sensory transducer [Treponema brennaborense DSM 12168] gi|332180019|gb|AEE15707.1| methyl-accepting chemotaxis sensory transducer [Treponema brennaborense DSM 12168] Length = 690 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPEC 50 C+ C C+ VCP +G N++ ++ D CI CG C C Sbjct: 16 CVNCHR--CITVCPAKMCNDGSGNYVGVNTDLCIGCGECIEAC 56 >gi|332159501|ref|YP_004424780.1| putative ATPase RIL [Pyrococcus sp. NA2] gi|331034964|gb|AEC52776.1| putative ATPase RIL [Pyrococcus sp. NA2] Length = 589 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD-------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C H C VCPV+ E N I C CG+C +CP AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENNKPIIQEASCTGCGICVHKCPFKAI 66 >gi|325578553|ref|ZP_08148653.1| hydrogenase-4 component A [Haemophilus parainfluenzae ATCC 33392] gi|325159789|gb|EGC71919.1| hydrogenase-4 component A [Haemophilus parainfluenzae ATCC 33392] Length = 214 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ILC+H D C VCPV + + ++ CI C +C CP AI Sbjct: 64 ILCRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 112 >gi|323491428|ref|ZP_08096612.1| hypothetical protein VIBR0546_18742 [Vibrio brasiliensis LMG 20546] gi|323314297|gb|EGA67377.1| hypothetical protein VIBR0546_18742 [Vibrio brasiliensis LMG 20546] Length = 228 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEKTGIIDVHKEKCVGCGYCLAACP 143 >gi|308163356|gb|EFO65699.1| Ferredoxin Fd1, Fd2 [Giardia lamblia P15] Length = 59 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 12 CKHTDCVEVCPVDCFY--EGENFLAI-HPDECIDCGVCEPECPVDAIK 56 C +C EVCP D F G +++ PD CI+CG C C +A+ Sbjct: 11 CATMECCEVCPADVFDFPSGAKVVSVARPDACIECGACVSACASNALS 58 >gi|262171714|ref|ZP_06039392.1| NrfC protein [Vibrio mimicus MB-451] gi|261892790|gb|EEY38776.1| NrfC protein [Vibrio mimicus MB-451] Length = 212 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 81 KSCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACP 127 >gi|154150875|ref|YP_001404493.1| putative ATPase RIL [Candidatus Methanoregula boonei 6A8] gi|153999427|gb|ABS55850.1| ABC transporter related [Methanoregula boonei 6A8] Length = 590 Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 6/47 (12%) Query: 15 TDCVEVCPV-----DCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 T+C+ CP + GE+ A+ +E C+ CG+C +CP DAI Sbjct: 18 TECIIYCPRVRTGDETVSIGEDGKALISEELCVGCGICIKKCPFDAI 64 >gi|159107463|ref|XP_001704011.1| Ferredoxin Fd1, Fd2 [Giardia lamblia ATCC 50803] gi|157432058|gb|EDO76337.1| Ferredoxin Fd1, Fd2 [Giardia lamblia ATCC 50803] Length = 59 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 12 CKHTDCVEVCPVDCFY--EGENFLAI-HPDECIDCGVCEPECPVDAIK 56 C +C EVCP D F G +++ PD CI+CG C C +A+ Sbjct: 11 CATMECCEVCPADVFDFPSGAKVVSVARPDACIECGACVSACASNALS 58 >gi|329904067|ref|ZP_08273662.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] gi|327548151|gb|EGF32865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] Length = 86 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|326800094|ref|YP_004317913.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingobacterium sp. 21] gi|326550858|gb|ADZ79243.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingobacterium sp. 21] Length = 189 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 14/106 (13%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C++ C VCP D ++ ++F +H CI C C CP K E EL Sbjct: 59 CMHCENPACANVCPADAIHQ-DDFGVVHSANTPRCIGCSNCVLACPFGVPKKMEEA--EL 115 Query: 66 WLKINSEY----ATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 +K N Y A + P T PS A G +++ E+ PN Sbjct: 116 MMKCNMCYDRTSAGKKPMCAT---VCPSQALFYGTREEIER-MRPN 157 >gi|325473842|gb|EGC77030.1| Fe-hydrogenase large subunit family protein [Treponema denticola F0402] Length = 500 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++T C C C+ CP I ++CI+CG+C CP A+ Sbjct: 120 YMITNACQACVARPCMMNCPKTAIAISGGRSRIDEEKCINCGICLKNCPYHAV 172 >gi|318058600|ref|ZP_07977323.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. SA3_actG] gi|318080109|ref|ZP_07987441.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. SA3_actF] Length = 315 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 126 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIE 177 >gi|307945104|ref|ZP_07660440.1| iron-sulfur cluster-binding protein [Roseibium sp. TrichSKD4] gi|307770977|gb|EFO30202.1| iron-sulfur cluster-binding protein [Roseibium sp. TrichSKD4] Length = 249 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++C+ C CV VCP Y+ + + + CI CG+C CP A + D G+ Sbjct: 81 KSCLHCDTAPCVTVCPTGASYKRSEDGIVLVDESACIGCGLCAWACPYGARELDQVAGV 139 >gi|301156415|emb|CBW15886.1| formate hydrogenlyase subunit 2 (fhl subunit 2) (hydrogenase-3 component b) [Haemophilus parainfluenzae T3T1] Length = 199 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ILC+H D C VCPV + + ++ CI C +C CP AI Sbjct: 49 ILCRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|221068920|ref|ZP_03545025.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|220713943|gb|EED69311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] Length = 86 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|218528219|ref|YP_002419035.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|218520522|gb|ACK81107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] Length = 936 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 760 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 803 >gi|158521172|ref|YP_001529042.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509998|gb|ABW66965.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 1002 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 + PD+C CG+CE +CP + + E GL I S A PN Sbjct: 106 VDPDKCTGCGICEKKCP-KLVTSEFEQGLTKRKAIYSLLAQAVPN 149 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C VCP D F + E ++ + +C+ CG+C CP A + Sbjct: 939 CMSC--LACFRVCPFDSPFIDEEGHISHNEVKCMGCGICAGVCPAKAFQ 985 >gi|20806703|ref|NP_621874.1| uncharacterized Fe-S center protein [Thermoanaerobacter tengcongensis MB4] gi|20515157|gb|AAM23478.1| uncharacterized Fe-S center protein [Thermoanaerobacter tengcongensis MB4] Length = 372 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV I CI CG C C IKP + Sbjct: 190 VVGKGCTACQM--CIRNCPVGAISLVNGSAYIDHSICIGCGECVSMCQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFIERMTEYA 258 >gi|282856353|ref|ZP_06265632.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] gi|282585724|gb|EFB91013.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] Length = 649 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI CK C+ CP F E I P +C+ C VC CP AI Sbjct: 595 KKCIGCKK--CLSTGCPALSFDTRERKAVIDPMQCVGCTVCAQVCPRQAI 642 >gi|265750369|ref|ZP_06086432.1| F420H2:quinone oxidoreductase [Bacteroides sp. 3_1_33FAA] gi|263237265|gb|EEZ22715.1| F420H2:quinone oxidoreductase [Bacteroides sp. 3_1_33FAA] Length = 411 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 18 VEVCPVDCFY---EGENFL--AIHPDECIDCGVCEPECPV 52 ++ CP C + E FL + +CIDCG+CE CP+ Sbjct: 1 MQKCPRQCISLHEDTEGFLYPVVDKGDCIDCGLCEKVCPL 40 >gi|302877710|ref|YP_003846274.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580499|gb|ADL54510.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gallionella capsiferriformans ES-2] Length = 84 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|240136885|ref|YP_002961352.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] gi|240006849|gb|ACS38075.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] Length = 941 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 765 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 808 >gi|239623412|ref|ZP_04666443.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239522378|gb|EEQ62244.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 241 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPE--CPVDAI 55 E CI C C + C + C ++I+ +EC+DCGVC C DAI Sbjct: 8 EKCIGCGR--CTDYCMLGCITRDGKKVSINEEECVDCGVCLRAGVCAADAI 56 >gi|258406380|ref|YP_003199122.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] gi|257798607|gb|ACV69544.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] Length = 807 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E CI C+ C VCP E + P C CG+C CP A Sbjct: 598 ETCIQCRM--CETVCPHGAIRLTEEGMVADPAFCQACGLCAAACPTHA 643 >gi|289828862|ref|ZP_06546605.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 220 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|261341169|ref|ZP_05969027.1| putative pyruvate formate-lyase 1 activating enzyme [Enterobacter cancerogenus ATCC 35316] gi|288316464|gb|EFC55402.1| putative pyruvate formate-lyase 1 activating enzyme [Enterobacter cancerogenus ATCC 35316] Length = 319 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEP 61 + E C+ C C ++CP + +++ D C CG+CE CP A+ EP Sbjct: 62 FFHAERCLHCGQ--CAQLCPTGLHSWQDGLHSLNRDRSCTGCGLCEERCPAAALNVVGEP 119 >gi|224418131|ref|ZP_03656137.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|253827458|ref|ZP_04870343.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313141666|ref|ZP_07803859.1| 4Fe-4S ferredoxin [Helicobacter canadensis MIT 98-5491] gi|253510864|gb|EES89523.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313130697|gb|EFR48314.1| 4Fe-4S ferredoxin [Helicobacter canadensis MIT 98-5491] Length = 83 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEECIACDA--CREECPNEAIDEGDPYYIIDPELCTECYGFYDEPACLSVCPVDA 58 Query: 55 I--KPDTEPGLE 64 I PD LE Sbjct: 59 IVSDPDNIESLE 70 >gi|163752219|ref|ZP_02159421.1| hypothetical protein KT99_10608 [Shewanella benthica KT99] gi|161327900|gb|EDP99078.1| hypothetical protein KT99_10608 [Shewanella benthica KT99] Length = 697 Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 C H D C++ CP + + + A+ P+ C CG C CP +A + D G Sbjct: 172 CNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLDPVKG 227 >gi|134096059|ref|YP_001101134.1| 4Fe-4S ferredoxin-type protein [Herminiimonas arsenicoxydans] gi|133739962|emb|CAL63013.1| Ferredoxin [Herminiimonas arsenicoxydans] Length = 87 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|86157468|ref|YP_464253.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773979|gb|ABC80816.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 100 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 20/111 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE CI C C CP +G++ I+PD C +C C CPVD Sbjct: 1 MATFITEECINCGA--CEPECPNSAISQGDDIYVINPDLCTECVGFHGEEACAAVCPVDC 58 Query: 55 IKPD---TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 PD TE + + K+ AT P+ T PS ++ ++ K Sbjct: 59 CVPDPNRTETEEQNYAKL----ATIHPDKT-----FPSLGELTAELSRFRK 100 >gi|26249119|ref|NP_755159.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli CFT073] gi|91212080|ref|YP_542066.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli UTI89] gi|117624952|ref|YP_853940.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli APEC O1] gi|170765966|ref|ZP_02900777.1| formate hydrogenlyase, subunit F [Escherichia albertii TW07627] gi|218690844|ref|YP_002399056.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli ED1a] gi|227888258|ref|ZP_04006063.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 83972] gi|237706657|ref|ZP_04537138.1| formate hydrogenlyase subunit 6 [Escherichia sp. 3_2_53FAA] gi|300976820|ref|ZP_07173637.1| hydrogenase 4 subunit H [Escherichia coli MS 45-1] gi|301049523|ref|ZP_07196481.1| hydrogenase 4 subunit H [Escherichia coli MS 185-1] gi|306812402|ref|ZP_07446600.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli NC101] gi|331658828|ref|ZP_08359770.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA206] gi|26109526|gb|AAN81729.1|AE016765_131 Formate hydrogenlyase subunit 6 [Escherichia coli CFT073] gi|91073654|gb|ABE08535.1| formate hydrogenlyase subunit 6 [Escherichia coli UTI89] gi|115514076|gb|ABJ02151.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli APEC O1] gi|170125112|gb|EDS94043.1| formate hydrogenlyase, subunit F [Escherichia albertii TW07627] gi|218428408|emb|CAR09333.2| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli ED1a] gi|226899697|gb|EEH85956.1| formate hydrogenlyase subunit 6 [Escherichia sp. 3_2_53FAA] gi|227834527|gb|EEJ44993.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli 83972] gi|294491620|gb|ADE90376.1| formate hydrogenlyase, subunit F [Escherichia coli IHE3034] gi|300298754|gb|EFJ55139.1| hydrogenase 4 subunit H [Escherichia coli MS 185-1] gi|300410006|gb|EFJ93544.1| hydrogenase 4 subunit H [Escherichia coli MS 45-1] gi|305854440|gb|EFM54878.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli NC101] gi|307554695|gb|ADN47470.1| formate hydrogenlyase subunit 6 [Escherichia coli ABU 83972] gi|307625709|gb|ADN70013.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli UM146] gi|315289283|gb|EFU48678.1| hydrogenase 4 subunit H [Escherichia coli MS 110-3] gi|315293723|gb|EFU53075.1| hydrogenase 4 subunit H [Escherichia coli MS 153-1] gi|320194858|gb|EFW69487.1| Formate hydrogenlyase complex 3 iron-sulfur protein [Escherichia coli WV_060327] gi|323188866|gb|EFZ74151.1| formate hydrogenlyase subunit 6 [Escherichia coli RN587/1] gi|323951061|gb|EGB46937.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323957068|gb|EGB52793.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] gi|331053410|gb|EGI25439.1| formate hydrogenlyase subunit 6 (FHL subunit 6) (Hydrogenase-3component F) [Escherichia coli TA206] Length = 180 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWQFDLGRCIFCGRCEEVCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|325959018|ref|YP_004290484.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330450|gb|ADZ09512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 252 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 15/24 (62%), Positives = 18/24 (75%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 LAI D C+ CG+CE CPV+AIK Sbjct: 194 LAIDEDICVACGMCEENCPVEAIK 217 >gi|284042623|ref|YP_003392963.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] gi|283946844|gb|ADB49588.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] Length = 177 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 18/65 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------------EGENFLAIHP---DECIDCGVCEPEC 50 E C+ C + C CP DC GE + A++ CI CG CE C Sbjct: 77 EKCVGC--SLCAAACPADCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVAC 134 Query: 51 PVDAI 55 P DAI Sbjct: 135 PFDAI 139 >gi|254558744|ref|YP_003065839.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] gi|254266022|emb|CAX21772.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] Length = 936 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECP 51 C+ C+H C VCPV ++GE + C+ CE CP Sbjct: 760 CMHCEHAPCEPVCPVAASVHDGEGLNLQVYNRCVGTRFCEANCP 803 >gi|288573617|ref|ZP_06391974.1| putative PAS/PAC sensor protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569358|gb|EFC90915.1| putative PAS/PAC sensor protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 586 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-----KP 57 Y V +C C CV CPV D C+ CG C CPV A +P Sbjct: 14 YTVKNDCQDC--YKCVRACPVKAIKIENGHAQEISDHCVLCGRCVEICPVGAKRIRDDRP 71 Query: 58 DTE----PGLELWLKINSEYATQWPNITTKK 84 + E G +++ I + ++P+++ K Sbjct: 72 EAERLLRSGKPVYVSIAPSWVGEFPDVSPGK 102 >gi|169335425|ref|ZP_02862618.1| hypothetical protein ANASTE_01837 [Anaerofustis stercorihominis DSM 17244] gi|169258163|gb|EDS72129.1| hypothetical protein ANASTE_01837 [Anaerofustis stercorihominis DSM 17244] Length = 114 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+H D C++ C + + ++++ ++CI C C CP A+ PD E G+ Sbjct: 26 VSCRHCDDAICLKSCISGALTKKDGLISVNKEKCIGCLTCVLVCPYGAVHPDEENGV 82 >gi|160935281|ref|ZP_02082663.1| hypothetical protein CLOBOL_00176 [Clostridium bolteae ATCC BAA-613] gi|158441639|gb|EDP19339.1| hypothetical protein CLOBOL_00176 [Clostridium bolteae ATCC BAA-613] Length = 507 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 13/109 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--- 59 V + I+ + C C +D EN A I D+C+ CG+C CP AI + Sbjct: 163 VCSYKAIIIQERPCAAACGMDAISTDENGKADIDYDKCVSCGMCLVNCPFGAIADKSQIF 222 Query: 60 ------EPGLELWLKINSEYATQW-PNITTKKESLPSAAKMDGVKQKYE 101 + G ++ + + Q+ P +T K L +A K G +E Sbjct: 223 QVIRAIQSGERVYAAVAPAFVGQFGPKVTPGK--LRAAMKALGFADVFE 269 >gi|103486787|ref|YP_616348.1| NADH dehydrogenase subunit I [Sphingopyxis alaskensis RB2256] gi|123379893|sp|Q1GTK7|NUOI_SPHAL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|98976864|gb|ABF53015.1| NADH-quinone oxidoreductase, chain I [Sphingopyxis alaskensis RB2256] Length = 162 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 23/104 (22%) Query: 7 ENCILCKHTDCV--------EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E CI CK + V E P D I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKLCEAVCPAQAITIEAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 120 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 N EYAT+ T++E L AK+ K+E+ Sbjct: 121 P----------NFEYATE-----TREELLYDKAKLLANGDKWER 149 >gi|283785102|ref|YP_003364967.1| oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] gi|282948556|emb|CBG88146.1| putative oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] Length = 222 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 5/98 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP--VDAIKP 57 + + ++C C+ C+EVCP + E + + CI CG C CP V + P Sbjct: 84 LYHFFRQSCQHCEDAPCIEVCPTGASWRDERGIVRVDGSRCIGCGYCIGACPYQVRYLHP 143 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 ++ + S A +P I S P A + G Sbjct: 144 QSKVADKCDFCAESRLAKGFPPICV--SSCPEQALLFG 179 >gi|264676947|ref|YP_003276853.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni CNB-2] gi|262207459|gb|ACY31557.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni CNB-2] Length = 86 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|302517468|ref|ZP_07269810.1| formate dehydrogenase, beta subunit [Streptomyces sp. SPB78] gi|302426363|gb|EFK98178.1| formate dehydrogenase, beta subunit [Streptomyces sp. SPB78] Length = 315 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 126 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIE 177 >gi|268678907|ref|YP_003303338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268616938|gb|ACZ11303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 190 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 ++C+ C++T CV VCP ++ E+ + + D C+ C C CP A Sbjct: 58 QSCVHCENTPCVNVCPTHASFKNEDGIVLVDVDLCVGCLYCVAACPYQA 106 >gi|237730860|ref|ZP_04561341.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] gi|226906399|gb|EEH92317.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] Length = 205 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 + G Sbjct: 119 DKG 121 >gi|170726214|ref|YP_001760240.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811561|gb|ACA86145.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 682 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 C H D C++ CP + + + A+ P+ C CG C CP +A P +P Sbjct: 168 CNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNA--PQLDP 220 >gi|222054450|ref|YP_002536812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221563739|gb|ACM19711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 251 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 20/97 (20%) Query: 9 CILCKHTDCVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD- 58 C+ C CV CPV + G + ++ +CI CG C P CP A D Sbjct: 80 CMQCDKPPCVAACPVKGPDGATWKETKGIGNGIVPVNYAKCIGCGNCVPACPYQARTMDD 139 Query: 59 ------TEPGLELWLKINS-EYATQWPNITTKKESLP 88 P L+++ + + EY +WP K+ +LP Sbjct: 140 GSFHTAGTPQLQVYETLPAFEYGKKWPR---KENTLP 173 >gi|52549383|gb|AAU83232.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured archaeon GZfos27A8] Length = 642 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C E+C VD I D+C+ CG C CP +A + E G +W+ N Sbjct: 527 CAELCRVDAISIVLGKAVIDKDKCVTCGWCIRGCPSEA-AIEKERGYAMWIGAN 579 >gi|82617263|emb|CAI64169.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] gi|268322996|emb|CBH36584.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] Length = 818 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 12 CKHTD-CVEVCP----VDCFYEGENFLAIHPDECIDCGVCEPECP 51 C D C+EVCP + + + LA D CI CG+CE CP Sbjct: 417 CNSCDLCIEVCPNKQTISKAMDDVSALADIYDNCIFCGLCEKACP 461 >gi|82617151|emb|CAI64058.1| carbon monoxide dehydrogenase/acetyl-CoA synthase like protein, alpha subunit [uncultured archaeon] Length = 818 Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 12 CKHTD-CVEVCP----VDCFYEGENFLAIHPDECIDCGVCEPECP 51 C D C+EVCP + + + LA D CI CG+CE CP Sbjct: 417 CNSCDLCIEVCPNKQTISKAMDDVSALADIYDNCIFCGLCEKACP 461 >gi|327311101|ref|YP_004337998.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoproteus uzoniensis 768-20] gi|326947580|gb|AEA12686.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoproteus uzoniensis 768-20] Length = 188 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 M Y++ C C++ CV VCP Y+ ++ L I+ D CI C C CP DA Sbjct: 57 MLYLL--QCQHCENPPCVTVCPTGASYKDKDGLVKINYDLCIGCRYCMVACPYDA 109 >gi|320538846|ref|ZP_08038522.1| putative iron-sulfur protein [Serratia symbiotica str. Tucson] gi|320031006|gb|EFW13009.1| putative iron-sulfur protein [Serratia symbiotica str. Tucson] Length = 190 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 107 VAYIDEANCIGC--TKCIQACPVDAIVGATGAMHTVIADLCTGCDLCVAPCPTDCIE 161 >gi|319943295|ref|ZP_08017578.1| electron transport complex protein RnfB [Lautropia mirabilis ATCC 51599] gi|319743837|gb|EFV96241.1| electron transport complex protein RnfB [Lautropia mirabilis ATCC 51599] Length = 248 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 +CI C T C+ CPVD F + D C C +C P CP D I Sbjct: 92 HCIGC--TKCILACPVDAIVGAPRFQHQVLTDRCTGCELCLPPCPTDCIS 139 >gi|310826460|ref|YP_003958817.1| Fe-S cluster domain protein [Eubacterium limosum KIST612] gi|308738194|gb|ADO35854.1| Fe-S cluster domain protein [Eubacterium limosum KIST612] Length = 452 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+ + C+ C T C+ CP E I +CIDCG C CP A T+P Sbjct: 8 VYLDKDKCLGC--TTCLRSCPTGAIRVREGKAKIIESKCIDCGECIRVCPHHAKMAKTDP 65 >gi|299531510|ref|ZP_07044916.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni S44] gi|298720473|gb|EFI61424.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni S44] Length = 86 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAI 24 >gi|261494021|ref|ZP_05990524.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496220|ref|ZP_05992626.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308172|gb|EEY09469.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310187|gb|EEY11387.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 205 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + +V+ + CI C T C++ CPVD + I PD C C +C CP + I+ Sbjct: 108 VAFVIEDLCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNCIE 162 >gi|255322915|ref|ZP_05364055.1| sulfur reductase FeS subunit [Campylobacter showae RM3277] gi|255300027|gb|EET79304.1| sulfur reductase FeS subunit [Campylobacter showae RM3277] Length = 189 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDT 59 +C++C+ CV VCP F E + + C+ C C CP DA ++P T Sbjct: 57 HSCVMCEDAPCVTVCPTGASFQTAEGIVLLDHSTCVSCKYCILACPYDARYVEPKT 112 >gi|291613334|ref|YP_003523491.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] gi|291583446|gb|ADE11104.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] Length = 430 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Query: 17 CVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV CP G+ L I+P CI G CE CP DAIK Sbjct: 63 CVAACPEGALGMINGKGTL-INPTVCIGHGACEAACPHDAIK 103 >gi|237733888|ref|ZP_04564369.1| aldo/keto reductase [Mollicutes bacterium D7] gi|229382969|gb|EEO33060.1| aldo/keto reductase [Coprobacillus sp. D7] Length = 382 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 18/65 (27%) Query: 8 NCILCKH----TDCVEVCPVD-----CFYEGE---------NFLAIHPDECIDCGVCEPE 49 NC+ C H C+ + V+ C +GE LA H ECI+CGVC Sbjct: 303 NCVYCGHCAPCVKCINIADVNKFADLCVAQGEVPETVREHYEVLAHHASECIECGVCIKN 362 Query: 50 CPVDA 54 CP + Sbjct: 363 CPFNV 367 >gi|121535425|ref|ZP_01667236.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306024|gb|EAX46955.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 191 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA--IKPDT 59 ++C++C ++ CV VCP Y ++ + I +C+ C C CP A I P T Sbjct: 60 QSCVMCDNSPCVSVCPTGASYTNKDGVNLIDEKKCVGCKYCVTACPYQARFINPKT 115 >gi|119774966|ref|YP_927706.1| electron transport complex protein RnfB [Shewanella amazonensis SB2B] gi|166225085|sp|A1S6N0|RNFB_SHEAM RecName: Full=Electron transport complex protein rnfB gi|119767466|gb|ABM00037.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 189 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD G+ + +C C +C CPVD I Sbjct: 106 VAYIREDECIGC--TKCIQACPVDAIVGAGKLMHTVITQDCTGCDLCVEPCPVDCI 159 >gi|323475168|gb|ADX85774.1| ABC transporter related protein [Sulfolobus islandicus REY15A] gi|323477900|gb|ADX83138.1| ABC transporter related protein [Sulfolobus islandicus HVE10/4] Length = 602 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 21 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 68 >gi|310778429|ref|YP_003966762.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] gi|309747752|gb|ADO82414.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] Length = 595 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y + + CI C T C VCPV+C + + I CI CG C C AI Sbjct: 539 LQYSINDKCIGC--TACARVCPVNCIAGKVKEKHVIDQSVCIKCGACYSTCKFGAI 592 >gi|300853896|ref|YP_003778880.1| putative Fe-S-cluster-containing hydrogenase components 2 [Clostridium ljungdahlii DSM 13528] gi|300434011|gb|ADK13778.1| predicted Fe-S-cluster-containing hydrogenase components 2 [Clostridium ljungdahlii DSM 13528] Length = 188 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C + CPV+ +++++ D C+ C +C CP AI+ Sbjct: 60 CRQCEDAPCGKACPVNAISNENGYVSVNKDVCVGCKICMLACPFGAIE 107 >gi|284998328|ref|YP_003420096.1| ABC transporter related protein [Sulfolobus islandicus L.D.8.5] gi|284446224|gb|ADB87726.1| ABC transporter related protein [Sulfolobus islandicus L.D.8.5] Length = 602 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 21 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 68 >gi|242398680|ref|YP_002994104.1| ATPase, ParA/MinD family, containing ferredoxin domains [Thermococcus sibiricus MM 739] gi|242265073|gb|ACS89755.1| ATPase, ParA/MinD family, containing ferredoxin domains [Thermococcus sibiricus MM 739] Length = 295 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E CI C C E CP DC + ++ C CGVC CPV+ + E + Sbjct: 68 SETCIKCGI--CAERCPYDCIKILDENYVVNELTCEGCGVCRLVCPVNGVITLEEVRSGV 125 Query: 66 WLKINSEYATQWPNITTKKE-SLPSAAKMDGVKQKYEKYFSPNPG 109 K ++Y +P I+ + + P++ K+ ++++ K G Sbjct: 126 IRKTTTKYG--FPLISAQLDVGRPNSGKLVTEEKEWAKRIMKEKG 168 >gi|229581623|ref|YP_002840022.1| putative ATPase RIL [Sulfolobus islandicus Y.N.15.51] gi|228012339|gb|ACP48100.1| ABC transporter related [Sulfolobus islandicus Y.N.15.51] Length = 602 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 21 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 68 >gi|229579709|ref|YP_002838108.1| ATPase RIL [Sulfolobus islandicus Y.G.57.14] gi|228010424|gb|ACP46186.1| ABC transporter related [Sulfolobus islandicus Y.G.57.14] Length = 602 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 21 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 68 >gi|227828106|ref|YP_002829886.1| ATPase RIL [Sulfolobus islandicus M.14.25] gi|238620306|ref|YP_002915132.1| putative ATPase RIL [Sulfolobus islandicus M.16.4] gi|227459902|gb|ACP38588.1| ABC transporter related [Sulfolobus islandicus M.14.25] gi|238381376|gb|ACR42464.1| ABC transporter related [Sulfolobus islandicus M.16.4] Length = 602 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 21 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 68 >gi|227830813|ref|YP_002832593.1| ATPase RIL [Sulfolobus islandicus L.S.2.15] gi|227457261|gb|ACP35948.1| ABC transporter related [Sulfolobus islandicus L.S.2.15] Length = 600 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 19 ECINFCPVD--RSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAI 66 >gi|161503521|ref|YP_001570633.1| hypothetical protein SARI_01597 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864868|gb|ABX21491.1| hypothetical protein SARI_01597 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 250 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 105 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 152 >gi|148643520|ref|YP_001274033.1| energy-converting hydrogenase B, subunit K, EhbK [Methanobrevibacter smithii ATCC 35061] gi|148552537|gb|ABQ87665.1| energy-converting hydrogenase B, subunit K, EhbK [Methanobrevibacter smithii ATCC 35061] Length = 412 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 +CI CK CVE+CP D N L I P C CG+CE C V+AI Sbjct: 213 SCIGCK--TCVEICPGDFIKFNTNNLTITLPKMCAACGLCEKMCSVNAI 259 >gi|154414924|ref|XP_001580488.1| Iron only hydrogenase large subunit, C-terminal domain containing protein [Trichomonas vaginalis G3] gi|121914706|gb|EAY19502.1| Iron only hydrogenase large subunit, C-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1103 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 15/86 (17%) Query: 34 AIHPDECIDCGVCEPECPVDA-IKPDTEPGL--------------ELWLKINSEYATQWP 78 +++ ++CI CG+C CP DA I + P L ++KINS+ +++ Sbjct: 157 SLNDNDCIQCGMCTTVCPTDALIHNSSVPQLIKAISSGKTMILQISPFVKINSDTHSKYL 216 Query: 79 NITTKKESLPSAAKMDGVKQKYEKYF 104 E + AA++ G + +++ F Sbjct: 217 TNQVSVEKIIGAARIMGFRYVFDQKF 242 >gi|119476464|ref|ZP_01616815.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2143] gi|119450328|gb|EAW31563.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2143] Length = 201 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 113 VAYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCI 166 >gi|77918675|ref|YP_356490.1| ferredoxin [Pelobacter carbinolicus DSM 2380] gi|77544758|gb|ABA88320.1| ferredoxin [Pelobacter carbinolicus DSM 2380] Length = 417 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 17 CVEVCPVDC---FYEGENFLAIHPDE--CIDCGVCEPECPVDAIK 56 C VCP F E + + D C+DCG C+ CPV+A K Sbjct: 327 CQLVCPFGWYAWFLEKISLTGVRIDSQICVDCGACDRACPVEAAK 371 >gi|33601102|ref|NP_888662.1| putative iron-sulfur binding protein [Bordetella bronchiseptica RB50] gi|33575537|emb|CAE32615.1| putative iron-sulfur binding protein [Bordetella bronchiseptica RB50] Length = 705 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V ++ C LC CV CP + + L + C+ CG+C CP +AI Sbjct: 571 VDSDACTLC--MSCVSACPSNALLDNPQSPQLRMVEKNCVQCGLCATTCPENAI 622 >gi|117920783|ref|YP_869975.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|146294906|ref|YP_001185330.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|33286385|gb|AAQ01673.1| ArrB [Shewanella sp. ANA-3] gi|117613115|gb|ABK48569.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] gi|145566596|gb|ABP77531.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 234 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 2 TYVVTENCILCKHTD---CVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 TY+ T LC H D CV+VCP ++ + L + DECI C C CP I Sbjct: 51 TYIPT----LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISF 106 Query: 58 DTEPGLELW 66 + W Sbjct: 107 NAATPHRRW 115 >gi|325958226|ref|YP_004289692.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329658|gb|ADZ08720.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 156 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 11/89 (12%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 C +CP + E + L + D CI C +C CPV + D E + +TQ Sbjct: 51 CARICPTNAIKEEDGVLMVDEDACILCRLCMISCPVGMMVMDLE-----------KKSTQ 99 Query: 77 WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 + +KE A ++ K K FS Sbjct: 100 KCTLCFEKEDRILPACVEACKDNVLKVFS 128 >gi|309388392|gb|ADO76272.1| Electron transfer flavoprotein alpha subunit [Halanaerobium praevalens DSM 2228] gi|309389792|gb|ADO77672.1| Electron transfer flavoprotein alpha subunit [Halanaerobium praevalens DSM 2228] Length = 418 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M + + C+ C CV CP D + + ++C CG+C +C DA++ D E Sbjct: 1 MLNIFEDKCVGCGV--CVTSCPFDALKMENDIAVVDTEKCTMCGICVKKCNFDAMEIDKE 58 >gi|301353399|ref|YP_003795632.1| photosystem I subunit VII [Pteridium aquilinum subsp. aquilinum] gi|301016317|gb|ADK47604.1| photosystem I subunit VII [Pteridium aquilinum subsp. aquilinum] Length = 81 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF----YEG--ENFLAIHP--DECIDCGVCEPECPVDAIK 56 + + CI C T CV CP D ++G N +A P ++C+ C CE CP D + Sbjct: 7 IYDTCIGC--TQCVRACPTDVLEMIPWDGCKANQIASAPRTEDCVGCKRCESACPTDFLS 64 Query: 57 PDTEPGLELWLKINSEY 73 PG E + Y Sbjct: 65 VRVYPGAETTRSMGLGY 81 >gi|240103186|ref|YP_002959495.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] gi|239910740|gb|ACS33631.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] Length = 658 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 26/57 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + C CK + CP + N + I C CGVC CP DAIK +E Sbjct: 597 VIEDKCTGCKACILLTGCPALVYDPETNKVRIDSLLCTGCGVCNQTCPFDAIKFPSE 653 >gi|239905934|ref|YP_002952673.1| Fe hydrogenase large subunit [Desulfovibrio magneticus RS-1] gi|239795798|dbj|BAH74787.1| Fe hydrogenase large subunit [Desulfovibrio magneticus RS-1] Length = 421 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C+ CP Y GE H + CI+CG C CPV AI Sbjct: 33 SKCIGCD--SCMGYCPTGAIYGETGEPHKIPHVEACINCGQCLTHCPVSAI 81 >gi|254478137|ref|ZP_05091520.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035999|gb|EEB76690.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] Length = 203 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C+ C+ CPV I CI CG C C IKP + Sbjct: 21 VVGKGCTACQM--CIRNCPVGAISLVNGSAYIDHSICIGCGECVSMCQYGVIKPQWGTDM 78 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 79 DAFIERMTEYA 89 >gi|189191492|ref|XP_001932085.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973691|gb|EDU41190.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 230 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 27/105 (25%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 N+EYAT+ T++E L + K+ K+E Sbjct: 187 EGP----------NAEYATE-----TREELLYNKEKLLANGDKWE 216 >gi|156934229|ref|YP_001438145.1| electron transport protein HydN [Cronobacter sakazakii ATCC BAA-894] gi|156532483|gb|ABU77309.1| hypothetical protein ESA_02059 [Cronobacter sakazakii ATCC BAA-894] Length = 182 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ P Sbjct: 59 CRQCEDAPCASVCPNGAITRDNDFVHVHQQRCIGCKTCVVACPYGAMEVVVRP 111 >gi|187477591|ref|YP_785615.1| ferredoxin [Bordetella avium 197N] gi|115422177|emb|CAJ48701.1| ferredoxin [Bordetella avium 197N] Length = 213 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +CI C T C+ CPVD + + D C C +C CPVD I D P W Sbjct: 84 HCIGC--TLCIRACPVDAIAGANKRMHTVLADLCSGCDLCVAPCPVDCI--DMVPAGRDW 139 Query: 67 LKINSEYATQ 76 ++ A Q Sbjct: 140 TASDASAARQ 149 >gi|325960196|ref|YP_004291662.1| methyl-viologen-reducing hydrogenase subunit delta [Methanobacterium sp. AL-21] gi|325331628|gb|ADZ10690.1| methyl-viologen-reducing hydrogenase delta subunit [Methanobacterium sp. AL-21] Length = 771 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 18/28 (64%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 +I PD CI CG C CPVDAI +++ Sbjct: 283 FSIDPDACIKCGKCVEACPVDAINLESK 310 >gi|293392063|ref|ZP_06636397.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952597|gb|EFE02716.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D7S-1] Length = 199 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ILC+H D C VCPV + + ++ CI C +C CP AI Sbjct: 49 ILCRHCDDSPCATVCPVHAITHEGDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|187932399|ref|YP_001886496.1| iron hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] gi|187720552|gb|ACD21773.1| iron hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] Length = 565 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 18/69 (26%) Query: 9 CILCKHTDCVEVC-------PVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDA 54 CILC DCV +C +D Y G N + + +C++CG C CP A Sbjct: 146 CILC--GDCVRMCNEIQNVGAIDFAYRGSNMVVSPAFGKCLGETDCVNCGQCANVCPTGA 203 Query: 55 I--KPDTEP 61 I K D +P Sbjct: 204 IVVKSDVKP 212 >gi|320156811|ref|YP_004189190.1| NrfC protein [Vibrio vulnificus MO6-24/O] gi|319932123|gb|ADV86987.1| NrfC protein [Vibrio vulnificus MO6-24/O] Length = 228 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACP 143 >gi|76803114|ref|YP_331209.1| iron-sulfur binding protein, ferredoxin-like [Natronomonas pharaonis DSM 2160] gi|76558979|emb|CAI50576.1| iron-sulfur binding protein, ferredoxin-like [Natronomonas pharaonis DSM 2160] Length = 714 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V E C L C CP D + L + + C++CG+C C D I D GL+ Sbjct: 582 VAEGCTLTP--TCSRFCPTDALRRTGSGLEFNHERCVNCGLCADVCVEDVITVDA--GLD 637 Query: 65 LWL 67 L L Sbjct: 638 LGL 640 >gi|325960232|ref|YP_004291698.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325331664|gb|ADZ10726.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 347 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C CP + + I + CIDCG+CE CP DAI Sbjct: 114 ETCIYCKA--CERACPREAITVARQLPDRSKLVTGEIDIDKETCIDCGICEEMCPADAIT 171 Query: 57 PD 58 D Sbjct: 172 ID 173 >gi|321455606|gb|EFX66734.1| hypothetical protein DAPPUDRAFT_189585 [Daphnia pulex] Length = 610 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 C+EV P D I CI CG+C +CP +AI P ++S+ + Sbjct: 48 CIEVAPTD------RIAVISETLCIGCGICVKKCPFEAITIINLPS-----NLDSQVTHR 96 Query: 77 WPNITTKKESLPS 89 + + K LP+ Sbjct: 97 YSQNSFKLHRLPT 109 >gi|312129873|ref|YP_003997213.1| 4fe-4S ferredoxin iroN-sulfur binding domain protein [Leadbetterella byssophila DSM 17132] gi|311906419|gb|ADQ16860.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leadbetterella byssophila DSM 17132] Length = 115 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 3/30 (10%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I DECI+CG CEPECP +AI E G+E Sbjct: 4 IITDECINCGACEPECPNNAIY---EGGME 30 >gi|312880734|ref|ZP_07740534.1| electron transport complex, RnfABCDGE type, B subunit [Aminomonas paucivorans DSM 12260] gi|310784025|gb|EFQ24423.1| electron transport complex, RnfABCDGE type, B subunit [Aminomonas paucivorans DSM 12260] Length = 271 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 21/39 (53%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV+ CP D + N I PD+C C +C +CP AI Sbjct: 224 CVKACPNDAVHVENNLARIDPDKCTQCCLCVDKCPTKAI 262 >gi|261868396|ref|YP_003256318.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413728|gb|ACX83099.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D11S-1] Length = 199 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ILC+H D C VCPV + + ++ CI C +C CP AI Sbjct: 49 ILCRHCDDSPCATVCPVHAITHEGDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|220933486|ref|YP_002512385.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994796|gb|ACL71398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 84 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/23 (69%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI P E Sbjct: 7 DECINCDVCEPECPNGAISPGDE 29 >gi|149912039|ref|ZP_01900632.1| Electron transport complex protein rnfB [Moritella sp. PE36] gi|149804900|gb|EDM64935.1| Electron transport complex protein rnfB [Moritella sp. PE36] Length = 182 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 + ++ E+CI C T C++ CPVD + + D C C +C CP D I Sbjct: 107 VARIIEEDCIGC--TKCIQACPVDAIAGATRAMHTVIVDSCTGCKLCVAPCPTDCIV--M 162 Query: 60 EPGLELW 66 EP W Sbjct: 163 EPVQAAW 169 >gi|91092422|ref|XP_968009.1| PREDICTED: similar to ribonuclease L inhibitor homolog [Tribolium castaneum] gi|270004744|gb|EFA01192.1| hypothetical protein TcasGA2_TC010519 [Tribolium castaneum] Length = 608 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+EV P AI + CI CG+C +CP +AI Sbjct: 46 CIEVTP------NSKMAAISEELCIGCGICVKKCPFEAI 78 >gi|29345451|ref|NP_808954.1| F420H2:quinone oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|298481942|ref|ZP_07000131.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] gi|29337343|gb|AAO75148.1| F420H2:quinone oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|298271806|gb|EFI13378.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] Length = 400 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 17 CVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 CV CP+ C EG + + CIDCG CE CP + ++ G+ ++ +N Sbjct: 16 CVSSCPLQCIELVKDKEGFMYPQVDTARCIDCGKCEKACP-ELVEAKGSGGVTVYAAVN 73 >gi|16760525|ref|NP_456142.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764735|ref|NP_460350.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141714|ref|NP_805056.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|207857109|ref|YP_002243760.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584104|ref|YP_002637902.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|4456871|emb|CAB37414.1| tetrathionate reductase subunit B (TtrB) [Salmonella typhimurium] gi|11139591|gb|AAG31757.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419905|gb|AAL20309.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502821|emb|CAD01980.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi] gi|29137342|gb|AAO68905.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|206708912|emb|CAR33242.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468631|gb|ACN46461.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246591|emb|CBG24401.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993272|gb|ACY88157.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157920|emb|CBW17415.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323129656|gb|ADX17086.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623491|gb|EGE29836.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988272|gb|AEF07255.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 250 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 105 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 152 >gi|332374474|gb|AEE62378.1| unknown [Dendroctonus ponderosae] Length = 609 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 6/39 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+EV P I + CI CG+C +CP DAI Sbjct: 47 CIEVSP------NSKIAVISEELCIGCGICVKKCPFDAI 79 >gi|317484216|ref|ZP_07943145.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924565|gb|EFV45722.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 240 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C CV+ CP Y+ E+ + + CI CG C CP A D Sbjct: 57 CMHCDEPSCVDACPTHATYKAEDGVVMVDETRCIACGSCMRACPYQARHID 107 >gi|271501252|ref|YP_003334277.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270344807|gb|ACZ77572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 339 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + +H D C C C CP D K D E Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALKKDPKTGVVHYDASICTGCRYCMVACPFDVPKYDYE 170 >gi|240172913|ref|ZP_04751572.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium kansasii ATCC 12478] Length = 293 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 113 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 163 >gi|164663359|ref|XP_001732801.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] gi|159106704|gb|EDP45587.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] Length = 245 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 E PV + GE+ L +P + CI C +CE CP AI ++EP ++ Sbjct: 122 EKGPVSPRFRGEHALRRYPTGEERCIACKLCEAICPALAITIESEPRMD 170 >gi|157145832|ref|YP_001453151.1| hypothetical protein CKO_01583 [Citrobacter koseri ATCC BAA-895] gi|157083037|gb|ABV12715.1| hypothetical protein CKO_01583 [Citrobacter koseri ATCC BAA-895] Length = 205 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 AKG 121 >gi|15678133|ref|NP_275248.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621136|gb|AAB84604.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 622 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C+ C C VCP D E+ I +CI CG C CPV Sbjct: 170 CVFCG--TCEIVCPTDAIKIVEDHAEIDKTKCIMCGSCLAACPV 211 >gi|89896192|ref|YP_519679.1| hypothetical protein DSY3446 [Desulfitobacterium hafniense Y51] gi|219668017|ref|YP_002458452.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335640|dbj|BAE85235.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538277|gb|ACL20016.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 239 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 18/86 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC--EPECPVDAIKPDTEPGLE 64 E C+ C +C+ CP+ G+ I+ DEC++CG+C + ECPV+A E Sbjct: 6 ELCLSCG--ECLPYCPMGAIEMGDT-AQINQDECVECGICIRQIECPVEAFYEPAE---- 58 Query: 65 LWLKINSEYATQWPNITTKKESLPSA 90 WP K S P+A Sbjct: 59 ---------TMMWPRSLRKVFSDPTA 75 >gi|328953055|ref|YP_004370389.1| NADH dehydrogenase (quinone) [Desulfobacca acetoxidans DSM 11109] gi|328453379|gb|AEB09208.1| NADH dehydrogenase (quinone) [Desulfobacca acetoxidans DSM 11109] Length = 617 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +TY + N C C CV CPV + I+ D CI CG+C C DA+K Sbjct: 560 LTYTIDPNECTSC--LACVRECPVGAISGPKKEPQVINQDLCIKCGLCHDVCQFDAVK 615 >gi|320196609|gb|EFW71232.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli WV_060327] Length = 205 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 TKG 121 >gi|297285975|ref|XP_002802906.1| PREDICTED: hypothetical protein LOC716487 [Macaca mulatta] Length = 360 Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI + EP Sbjct: 249 EKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEP 294 >gi|188586666|ref|YP_001918211.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351353|gb|ACB85623.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 149 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C +VCPV + DECI CG C+ CP D I Sbjct: 54 CNQCDNAFCEKVCPVSAIKRENGIPVVVQDECIGCGQCQKYCPRDVI 100 >gi|168243690|ref|ZP_02668622.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450668|ref|YP_002048269.1| cytochrome c nitrite reductase Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200387438|ref|ZP_03214050.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194408972|gb|ACF69191.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199604536|gb|EDZ03081.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205337307|gb|EDZ24071.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 223 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|197251255|ref|YP_002149193.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214958|gb|ACH52355.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 223 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|218778244|ref|YP_002429562.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759628|gb|ACL02094.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 331 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C LC + +D EG ++ D+C+ CGVC+ CP DAI D Sbjct: 272 EECELCLERCVFKAIEMD---EGIGAAVVNADKCMGCGVCQVTCPADAIVLD 320 >gi|186475080|ref|YP_001856550.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phymatum STM815] gi|184191539|gb|ACC69504.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phymatum STM815] Length = 85 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|16767529|ref|NP_463144.1| formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991482|ref|ZP_02572581.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168466975|ref|ZP_02700823.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821264|ref|ZP_02833264.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197263392|ref|ZP_03163466.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422839|gb|AAL23103.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|195630636|gb|EDX49248.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197241647|gb|EDY24267.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330187|gb|EDZ16951.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205342069|gb|EDZ28833.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261249378|emb|CBG27241.1| cytochrome C-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996599|gb|ACY91484.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160771|emb|CBW20302.1| 4Fe-4S subunit, subunit of nitrite reductase complex [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915383|dbj|BAJ39357.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088687|emb|CBY98445.1| Uncharacterized ferredoxin-like protein ydhX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223150|gb|EFX48220.1| NrfC protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132620|gb|ADX20050.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991095|gb|AEF10078.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 223 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|219666328|ref|YP_002456763.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219536588|gb|ACL18327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 264 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP---DTEPGLE 64 C C H CV VCP + E+ + + CI C C CP A D +P L Sbjct: 121 CNHCDHPPCVRVCPTQATFRREDGVVGMDMHRCIGCRFCMAACPYGARSFNYWDPKPHLA 180 Query: 65 LWLKINSEYATQWPNITTK 83 KIN EY + + K Sbjct: 181 ---KINPEYPHRSKGVVEK 196 >gi|325281874|ref|YP_004254416.1| Ferredoxin hydrogenase [Odoribacter splanchnicus DSM 20712] gi|324313683|gb|ADY34236.1| Ferredoxin hydrogenase [Odoribacter splanchnicus DSM 20712] Length = 471 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C+ CV CP +I ++C+ CG+C+ CP AI Sbjct: 112 YAVTNLCRGCEGRPCVMNCPKAAISFIGGKASISSEDCVSCGLCQKVCPYHAI 164 >gi|323704595|ref|ZP_08116173.1| cobyrinic acid a,c-diamide synthase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536057|gb|EGB25830.1| cobyrinic acid a,c-diamide synthase [Thermoanaerobacterium xylanolyticum LX-11] Length = 289 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E+ VD FY G+ I ++CI CG+CE C DAI Sbjct: 48 EIQKVDNFY-GKEVALIDEEKCIKCGLCETLCRFDAI 83 >gi|310780235|ref|YP_003968567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749558|gb|ADO84219.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 59 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + ++ CI C C VCPV C E + I CIDCG C CPV+ I P Sbjct: 1 MAYRINQSECIACGA--CEPVCPVSCISEVVDGKREIDESACIDCGACAGVCPVECIAP 57 >gi|296132288|ref|YP_003639535.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296030866|gb|ADG81634.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 297 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V C+ C CV VCP ++ E+ + I D CI C C CP + E Sbjct: 102 YKVKMQCMHCNEPSCVAVCPTGAAFKREDGIVLIDGDVCIACRNCVVACPYAIPGENKES 161 Query: 62 GL 63 G+ Sbjct: 162 GV 163 >gi|170290379|ref|YP_001737195.1| heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] gi|170174459|gb|ACB07512.1| Heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] Length = 648 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 20/40 (50%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E + P C+ CG+C+ CP AI+ Sbjct: 588 CVEECPFSAIVLEEGKAKVLPLACMGCGICQGACPTGAIE 627 >gi|167625917|ref|YP_001676211.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355939|gb|ABZ78552.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 181 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ +C+ C++ C+ VCP ++ + + + ++C CG+C CP A+ + G Sbjct: 57 LSHSCMHCENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYSAVSIREDDG 115 >gi|157148004|ref|YP_001455323.1| hypothetical protein CKO_03811 [Citrobacter koseri ATCC BAA-895] gi|157085209|gb|ABV14887.1| hypothetical protein CKO_03811 [Citrobacter koseri ATCC BAA-895] Length = 223 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|154498821|ref|ZP_02037199.1| hypothetical protein BACCAP_02812 [Bacteroides capillosus ATCC 29799] gi|150272211|gb|EDM99415.1| hypothetical protein BACCAP_02812 [Bacteroides capillosus ATCC 29799] Length = 316 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP-GLEL 65 E C CK +VCP+ + L+I D C +CG C +C DA+ T + + Sbjct: 171 EECNGCKKCGVAQVCPMGAAKLEDGELSIDKDVCNNCGRCIDKCYFDAMDGGTFAYKIYI 230 Query: 66 WLKINSEYATQWP---NITTKKESL 87 + AT P ITTK+E+L Sbjct: 231 GGRWGKRTATGRPLSKLITTKEEAL 255 >gi|15668758|ref|NP_247557.1| iron-sulfer cluster binding protein [Methanocaldococcus jannaschii DSM 2661] gi|2494450|sp|Q57998|Y578_METJA RecName: Full=Uncharacterized protein MJ0578 gi|1591285|gb|AAB98569.1| iron-sulfer cluster binding protein [Methanocaldococcus jannaschii DSM 2661] Length = 276 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + ++CI C C++VC D + I+P C CG CE C DAI+P Sbjct: 69 IYEINDDCIRCGK--CLDVCQFDAIGD----FKINPILCEGCGACELICEFDAIEP 118 >gi|312143536|ref|YP_003994982.1| iron-sulfur protein [Halanaerobium sp. 'sapolanicus'] gi|311904187|gb|ADQ14628.1| putative iron-sulfur protein [Halanaerobium sp. 'sapolanicus'] Length = 420 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 + C C+ C+ +CPV+ E E+ + + + C+ CGVC CP + IK Sbjct: 287 LTNNKCSQCQ--KCLSICPVNAISEIEDEEGKKIVVDKELCLGCGVCLRTCPENNIK 341 >gi|284921494|emb|CBG34565.1| putative anaerobic dimethyl sulfoxide reductase, Fe-S subunit [Escherichia coli 042] Length = 205 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + + CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDENVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 E G Sbjct: 119 EKG 121 >gi|212702956|ref|ZP_03311084.1| hypothetical protein DESPIG_00993 [Desulfovibrio piger ATCC 29098] gi|212673544|gb|EEB34027.1| hypothetical protein DESPIG_00993 [Desulfovibrio piger ATCC 29098] Length = 566 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 9/56 (16%) Query: 9 CILCKHTD----CVEVCP-----VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C H CVE CP + + E E +H +EC C C CP AI Sbjct: 501 CFHCGHCKACGTCVEDCPGYVLEMRPYQEAERPEMVHGEECWHCANCRTSCPCSAI 556 >gi|229815904|ref|ZP_04446228.1| hypothetical protein COLINT_02960 [Collinsella intestinalis DSM 13280] gi|229808599|gb|EEP44377.1| hypothetical protein COLINT_02960 [Collinsella intestinalis DSM 13280] Length = 421 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 7 ENCILCKHTDCVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + C +C CVE CP C LAI P CI CG+C C A+K G EL Sbjct: 320 DRCTMCGA--CVEACPTFACDLLNGGKLAIEPTYCIGCGLCAEVCSDHALKMVERDGSEL 377 >gi|168236981|ref|ZP_02662039.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734388|ref|YP_002117213.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709890|gb|ACF89111.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290036|gb|EDY29395.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 223 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|148225889|ref|NP_001087331.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus laevis] gi|51593201|gb|AAH78569.1| MGC85457 protein [Xenopus laevis] Length = 207 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 18 VEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI + EP Sbjct: 83 FEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAACPAQAITIEAEP 129 >gi|56416077|ref|YP_153152.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617418|ref|YP_001591383.1| hypothetical protein SPAB_05274 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168231287|ref|ZP_02656345.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470140|ref|ZP_03076124.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197365004|ref|YP_002144641.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238912736|ref|ZP_04656573.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|56130334|gb|AAV79840.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366782|gb|ABX70550.1| hypothetical protein SPAB_05274 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194456504|gb|EDX45343.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197096481|emb|CAR62088.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205334315|gb|EDZ21079.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 223 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|89893061|ref|YP_516548.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor [Desulfitobacterium hafniense Y51] gi|89332509|dbj|BAE82104.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor [Desulfitobacterium hafniense Y51] Length = 264 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP---DTEPGLE 64 C C H CV VCP + E+ + + CI C C CP A D +P L Sbjct: 121 CNHCDHPPCVRVCPTQATFRREDGVVGMDMHRCIGCRFCMAACPYGARSFNYWDPKPHLA 180 Query: 65 LWLKINSEYATQWPNITTK 83 KIN EY + + K Sbjct: 181 ---KINPEYPHRSKGVVEK 196 >gi|262402395|ref|ZP_06078956.1| NrfC protein [Vibrio sp. RC586] gi|262351177|gb|EEZ00310.1| NrfC protein [Vibrio sp. RC586] Length = 212 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H + C+ CG C CP Sbjct: 81 KSCQHCENPPCVYVCPTGAAYKDETTGIVDVHKERCVGCGYCIAACP 127 >gi|254821794|ref|ZP_05226795.1| hypothetical protein MintA_17812 [Mycobacterium intracellulare ATCC 13950] Length = 76 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 15 TDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAI 55 T CVEVCP+D G+ F+ H DEC CG C CP A+ Sbjct: 25 TLCVEVCPLDALAINPDTGKAFM--HVDECWYCGPCAARCPTGAV 67 >gi|261345710|ref|ZP_05973354.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rustigianii DSM 4541] gi|282566197|gb|EFB71732.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rustigianii DSM 4541] Length = 223 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 +C C+H CV+VCP + + + ++PD C+ C C CP Sbjct: 90 HSCQHCEHAPCVDVCPTGASFIDKATGIVDVNPDLCVGCQYCIAACP 136 >gi|226324705|ref|ZP_03800223.1| hypothetical protein COPCOM_02491 [Coprococcus comes ATCC 27758] gi|225207153|gb|EEG89507.1| hypothetical protein COPCOM_02491 [Coprococcus comes ATCC 27758] Length = 263 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + V + CI CK C +VC D + +N I P++C +CG C +CP IK Sbjct: 210 VMSVCSVGCIGCKM--CEKVCESDAVHVVDNIAHIDPEKCTNCGKCAEKCPKKIIK 263 >gi|225024698|ref|ZP_03713890.1| hypothetical protein EIKCOROL_01580 [Eikenella corrodens ATCC 23834] gi|224942537|gb|EEG23746.1| hypothetical protein EIKCOROL_01580 [Eikenella corrodens ATCC 23834] Length = 85 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 5/39 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 DECI+C VCEPECP DAI G E++ +I+ + TQ Sbjct: 7 DECINCDVCEPECPNDAIS----QGEEIY-EIDPDLCTQ 40 >gi|218559710|ref|YP_002392623.1| formate hydrogenlyase complex iron-sulfur subunit [Escherichia coli S88] gi|218366479|emb|CAR04231.1| formate hydrogenlyase complex iron-sulfur protein [Escherichia coli S88] Length = 180 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CP + GE CI CG CE CP AIK E Sbjct: 38 QQCIGC--AACVNACPSNALTVETDLATGELAWQFDLGRCIFCGRCEEFCPTAAIKLSQE 95 Query: 61 PGLELWLK 68 L +W K Sbjct: 96 YELAVWKK 103 >gi|212710427|ref|ZP_03318555.1| hypothetical protein PROVALCAL_01489 [Providencia alcalifaciens DSM 30120] gi|212686847|gb|EEB46375.1| hypothetical protein PROVALCAL_01489 [Providencia alcalifaciens DSM 30120] Length = 187 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 10 ILCKHTD---CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +LC+ D C VCPV+ + ++ CI C +C CP AI P Sbjct: 31 MLCRQCDDAPCARVCPVNAITHENGMIVLNESLCIGCKLCGLVCPFGAITP 81 >gi|212224715|ref|YP_002307951.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] gi|212009672|gb|ACJ17054.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] Length = 166 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 NC C+ CVEVCP + Y + + + + P +CI C +C CP P L+L Sbjct: 47 NCRHCEKAPCVEVCPTNALYRDKDGAVLLAPQKCIGCLMCGIVCPFGI------PELDLI 100 Query: 67 LKINSE-----YATQWPNITTKKESLPSAAKMDG-----VKQKYEKY 103 KI + + + E+ P+ A + G VK++ EK+ Sbjct: 101 NKIMGKCDLCAHRRAEGKLPACVETCPTDALIYGDFNEIVKKRREKF 147 >gi|330889653|gb|EGH22314.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. mori str. 301020] Length = 153 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 31 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 88 Query: 57 --PDTE 60 PD E Sbjct: 89 LTPDFE 94 >gi|330447721|ref|ZP_08311369.1| dimethylsulfoxide reductase, chain B [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491912|dbj|GAA05866.1| dimethylsulfoxide reductase, chain B [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 205 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C C +VCP ++ + F+ + ++CI C C CP A + + Sbjct: 58 FSYYVSIACNHCTKPACTKVCPSGAMHKRKEDGFVVVDTEKCIGCQYCGMACPYGAPQYN 117 Query: 59 TEPG 62 E G Sbjct: 118 AEKG 121 >gi|323492677|ref|ZP_08097821.1| iron-sulfur cluster-binding protein [Vibrio brasiliensis LMG 20546] gi|323313052|gb|EGA66172.1| iron-sulfur cluster-binding protein [Vibrio brasiliensis LMG 20546] Length = 554 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECP 51 +C LC CV VCP + +GE+ L +CI CG+C CP Sbjct: 420 DCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCTKACP 463 >gi|303327190|ref|ZP_07357632.1| putative pyruvate formate-lyase activating enzyme [Desulfovibrio sp. 3_1_syn3] gi|302863178|gb|EFL86110.1| putative pyruvate formate-lyase activating enzyme [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 19/41 (46%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CP + LAI D+C CG+C CP A++ Sbjct: 59 SCASACPKGLIAMRDGSLAIERDQCDACGLCAAACPSTALR 99 >gi|269925977|ref|YP_003322600.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789637|gb|ACZ41778.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 270 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 ++++ C C C+E CP E + I PD C CG C P CP Sbjct: 86 MMSDVCKHCAVAGCLEACPTGAIIRTEFGTVYIQPDICNGCGYCVPACP 134 >gi|198241756|ref|YP_002218172.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936272|gb|ACH73605.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326625971|gb|EGE32316.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 223 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|163800923|ref|ZP_02194823.1| iron-sulfur cluster-binding protein [Vibrio sp. AND4] gi|159175272|gb|EDP60069.1| iron-sulfur cluster-binding protein [Vibrio sp. AND4] Length = 553 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGEN-FLAIHPDECIDCGVCEPECPVDAI 55 ++ C LC CV VCP + +GE+ L +CI CG+CE CP + + Sbjct: 417 SKGCTLC--MSCVAVCPTRALHTDGESPSLKFIEQDCIQCGLCEKACPENVL 466 >gi|297619219|ref|YP_003707324.1| Cobyrinic acid ac-diamide synthase [Methanococcus voltae A3] gi|297378196|gb|ADI36351.1| Cobyrinic acid ac-diamide synthase [Methanococcus voltae A3] Length = 293 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 22/46 (47%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 DC + C + +N + C DCG+C CPV+AI T P Sbjct: 75 DCAKYCNFNALAITKNSALVFEKLCHDCGLCYEVCPVNAISEITRP 120 >gi|148643469|ref|YP_001273982.1| tungsten formylmethanofuran dehydrogenase, subunit F, FwdF [Methanobrevibacter smithii ATCC 35061] gi|89953728|gb|ABD83344.1| FwdF [Methanobrevibacter smithii] gi|148552486|gb|ABQ87614.1| tungsten formylmethanofuran dehydrogenase, subunit F, FwdF [Methanobrevibacter smithii ATCC 35061] Length = 365 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENF----LAIHPDECIDCGVCEPECPVDAIK 56 + CI CK C CP D E +N +++ D+C+ CG+C+ CP +AI Sbjct: 134 DKCIYCKR--CETACPQDAITVMRKLPERQNLVSGEISVSDDDCVYCGICQELCPAEAIV 191 Query: 57 PDTEPGLE 64 D G E Sbjct: 192 VDNTTGQE 199 >gi|88601754|ref|YP_501932.1| 2-oxoacid:acceptor oxidoreductase subunit delta, pyruvate/2-ketoisovalerate [Methanospirillum hungatei JF-1] gi|88187216|gb|ABD40213.1| pyruvate ferredoxin oxidoreductase, delta subunit [Methanospirillum hungatei JF-1] Length = 85 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 21/44 (47%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C VCP C G+ D C CG+C ECP AI +TE Sbjct: 40 CQLVCPEGCILTGDKQFNPDYDFCKGCGLCAQECPAKAITMETE 83 >gi|59711541|ref|YP_204317.1| electron transport complex protein RnfB [Vibrio fischeri ES114] gi|197334877|ref|YP_002155697.1| electron transport complex protein RnfB [Vibrio fischeri MJ11] gi|75507049|sp|Q5E6B7|RNFB_VIBF1 RecName: Full=Electron transport complex protein rnfB gi|226735435|sp|B5FCN4|RNFB_VIBFM RecName: Full=Electron transport complex protein rnfB gi|59479642|gb|AAW85429.1| predicted iron-sulfur protein (Rnf/Rsx reducing system) [Vibrio fischeri ES114] gi|197316367|gb|ACH65814.1| electron transport complex protein RnfB [Vibrio fischeri MJ11] Length = 194 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + EC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIESECTGCDLCVAPCPTDCIE 160 >gi|73532680|dbj|BAE19898.1| tetrathionate reductase subunit B [Edwardsiella tarda] Length = 188 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 20/125 (16%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA------- 54 +++ C C++ CV VCPV Y+ ++ + + C+ C C CP DA Sbjct: 55 FMLPRLCNHCENPPCVAVCPVQATYQRDDGIVMVDNRRCVGCAYCIQACPYDARFISQLT 114 Query: 55 --------IKPDTEPGLELWL-KINSEYAT---QWPNITTKKESLPSAAKMDGVKQKYEK 102 ++P G+ L ++ + + +P ++ AA G+ +K E+ Sbjct: 115 LTSHNMHILRPRCRGGVVARLRRVTRRWGSLRRLYPRSGQLRDPPAGAASGVGLCKKPEQ 174 Query: 103 YFSPN 107 + +P Sbjct: 175 HAAPR 179 >gi|45358921|ref|NP_988478.1| ferredoxin [Methanococcus maripaludis S2] gi|45047787|emb|CAF30914.1| ferredoxin [Methanococcus maripaludis S2] Length = 132 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV CPV E F + + DECI C C CPV+AIK Sbjct: 80 EKCIDCGA--CVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIK 128 >gi|15898912|ref|NP_343517.1| pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) [Sulfolobus solfataricus P2] gi|284173031|ref|ZP_06387000.1| pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) protein [Sulfolobus solfataricus 98/2] gi|1707734|emb|CAA69454.1| orf c01004 [Sulfolobus solfataricus P2] gi|13815423|gb|AAK42307.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) [Sulfolobus solfataricus P2] gi|261603331|gb|ACX92934.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus solfataricus 98/2] Length = 363 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWVYCPDECFDETPDGYYDIAYDYCVGCGICAEVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEY 73 D E+W + ++Y Sbjct: 326 DYRRPYEMWKEDKAKY 341 >gi|329929483|ref|ZP_08283217.1| 4Fe-4S binding domain protein [Paenibacillus sp. HGF5] gi|328936371|gb|EGG32818.1| 4Fe-4S binding domain protein [Paenibacillus sp. HGF5] Length = 112 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V + CI C CV+VCP + F E L + ++C C +CE CP DA+ Sbjct: 5 VSQQRCIECGL--CVKVCPTNVFDRTETGLPVIARQEDCQTCFICEAYCPADAL 56 >gi|326796151|ref|YP_004313971.1| electron transport complex protein rnfB [Marinomonas mediterranea MMB-1] gi|326546915|gb|ADZ92135.1| Electron transport complex protein rnfB [Marinomonas mediterranea MMB-1] Length = 198 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 VAVIREDECIGC--TKCIQACPVDAILGAAKQMHTVIADECTGCDLCVEPCPVDCI 160 >gi|322832829|ref|YP_004212856.1| electron transport complex, RnfABCDGE type, B subunit [Rahnella sp. Y9602] gi|321168030|gb|ADW73729.1| electron transport complex, RnfABCDGE type, B subunit [Rahnella sp. Y9602] Length = 188 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIK 56 + Y+ NCI C T C++ CPVD A+H D C C +C CP D I+ Sbjct: 108 VAYIDESNCIGC--TKCIQACPVDAIVGATR--AVHTVITDLCTGCDLCVAPCPTDCIE 162 >gi|326424121|ref|NP_761830.2| NrfC protein [Vibrio vulnificus CMCP6] gi|319999504|gb|AAO11357.2| NrfC protein [Vibrio vulnificus CMCP6] Length = 226 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 95 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACP 141 >gi|310780339|ref|YP_003968671.1| FAD dependent oxidoreductase [Ilyobacter polytropus DSM 2926] gi|309749662|gb|ADO84323.1| FAD dependent oxidoreductase [Ilyobacter polytropus DSM 2926] Length = 661 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 23/46 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNI 80 + D+C CGVC +CP K + E GL I + +A PN+ Sbjct: 238 VDMDKCTGCGVCTEKCPSKKAKNEFEEGLSKRGAIYTPFAQAVPNV 283 >gi|283833194|ref|ZP_06352935.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291070827|gb|EFE08936.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 205 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 AKG 121 >gi|262193883|ref|YP_003265092.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] gi|262077230|gb|ACY13199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] Length = 591 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 15/51 (29%) Query: 17 CVEVCPVD----CFYEGE------NFLAIH-----PDECIDCGVCEPECPV 52 C EVCPV YE E + +H P+ CI CG+CE ECPV Sbjct: 512 CEEVCPVSPKAIGTYEEEIVRWDGTKVTLHKPYMRPELCIGCGICERECPV 562 >gi|224023757|ref|ZP_03642123.1| hypothetical protein BACCOPRO_00473 [Bacteroides coprophilus DSM 18228] gi|224016979|gb|EEF74991.1| hypothetical protein BACCOPRO_00473 [Bacteroides coprophilus DSM 18228] Length = 268 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 12/24 (50%), Positives = 17/24 (70%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 D CI CG+CE CP++ I+ D +P Sbjct: 199 DACISCGICEKVCPMNNIRVDRKP 222 >gi|224372257|ref|YP_002606629.1| ferredoxin [Nautilia profundicola AmH] gi|223588828|gb|ACM92564.1| ferredoxin [Nautilia profundicola AmH] Length = 85 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C CV+ CP + I PD C +C C CPVDA Sbjct: 1 MSLMINEECIACDA--CVDECPNGAIEPADPIYEIDPDLCTECIEHGGEPQCVQVCPVDA 58 Query: 55 IKPD---TEPGLELWLK 68 I PD E EL LK Sbjct: 59 IVPDPDNMENAKELRLK 75 >gi|254475969|ref|ZP_05089355.1| NADH dehydrogenase i, i subunit [Ruegeria sp. R11] gi|214030212|gb|EEB71047.1| NADH dehydrogenase i, i subunit [Ruegeria sp. R11] Length = 164 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|213421582|ref|ZP_03354648.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 161 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 28 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 74 >gi|16762960|ref|NP_458577.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144447|ref|NP_807789.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213021319|ref|ZP_03335766.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213163055|ref|ZP_03348765.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427238|ref|ZP_03359988.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622746|ref|ZP_03375529.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647382|ref|ZP_03377435.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859692|ref|ZP_03385396.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25285334|pir||AF1020 cytochrome c-type biogenesis protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505267|emb|CAD09263.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140085|gb|AAO71649.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 223 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|27380595|ref|NP_772124.1| ferredoxin [Bradyrhizobium japonicum USDA 110] gi|27353760|dbj|BAC50749.1| blr5484 [Bradyrhizobium japonicum USDA 110] Length = 656 Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Query: 11 LCKHTD--------CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 LC H+ C+++CP + +A++ D C CG C CP A Sbjct: 257 LCAHSRSKLTGCHRCLDLCPTGAITPDGDHVAVNADVCAGCGQCAAACPTGA 308 >gi|219667337|ref|YP_002457772.1| dimethylsulfoxide reductase subunit B [Desulfitobacterium hafniense DCB-2] gi|219537597|gb|ACL19336.1| dimethylsulfoxide reductase, chain B [Desulfitobacterium hafniense DCB-2] Length = 192 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECP 51 Y ++ C CK CVE CP ++ EN + H +CI C C CP Sbjct: 52 YYLSITCNHCKEPKCVEGCPTQAMHKLENGIVAHDKSKCIGCRYCTWSCP 101 >gi|332162877|ref|YP_004299454.1| hydrogenase 2 protein HybA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604279|emb|CBY25777.1| hydrogenase-2 operon protein hybA precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325667107|gb|ADZ43751.1| hydrogenase 2 protein HybA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863324|emb|CBX73447.1| hydrogenase-2 operon protein hybA [Yersinia enterocolitica W22703] Length = 342 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H PD C C C CP + K D Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYD 168 >gi|304314315|ref|YP_003849462.1| glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] gi|302587774|gb|ADL58149.1| predicted glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] Length = 619 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C+ C C VCP D E+ I +CI CG C CPV Sbjct: 167 CVFCG--TCEIVCPTDAIEIVEDHAEIDKTKCIMCGSCLAACPV 208 >gi|297620126|ref|YP_003708231.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297379103|gb|ADI37258.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 166 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C+EVCPVD + ++C+ CG C CPV AI Sbjct: 38 NEKCVFC--NKCIEVCPVDAIDLNFPENTVITEKCVHCGTCIDVCPVKAI 85 >gi|288932668|ref|YP_003436728.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894916|gb|ADC66453.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 160 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C+ +CPV Y E N + + PD CI C C CP AI D + Sbjct: 52 GCEHCEEAPCMIICPVKAIYRDEETNAVLLDPDICIGCKQCMVVCPFGAIGFDED 106 >gi|326201720|ref|ZP_08191591.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium papyrosolvens DSM 2782] gi|325988320|gb|EGD49145.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium papyrosolvens DSM 2782] Length = 597 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y + +NC CK CP F +G+ + I P C CG+C CP +AI Sbjct: 541 YTIKDNCKNCKKCITDIGCPAISFIDGK--VNIEPSLCYGCGLCTNVCPFNAI 591 >gi|257068147|ref|YP_003154402.1| formate dehydrogenase beta subunit [Brachybacterium faecium DSM 4810] gi|256558965|gb|ACU84812.1| formate dehydrogenase beta subunit [Brachybacterium faecium DSM 4810] Length = 333 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 + ++ C C + C++VCP + E+ + + D C CG C CP I+ Sbjct: 136 MSSDVCKHCTNAGCLDVCPTGAIFRSEHGSVVVQEDVCNGCGTCVSACPFGVIE 189 >gi|169633144|ref|YP_001706880.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii SDF] gi|169151936|emb|CAP00792.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii] Length = 87 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCDM--CLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IK D Sbjct: 59 IKQD 62 >gi|168822252|ref|ZP_02834252.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197251728|ref|YP_002146655.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204927473|ref|ZP_03218674.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238913210|ref|ZP_04657047.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|197215431|gb|ACH52828.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204322815|gb|EDZ08011.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205341348|gb|EDZ28112.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 244 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|94263864|ref|ZP_01287669.1| Electron-transferring-flavoprotein dehydrogenase [delta proteobacterium MLMS-1] gi|93455785|gb|EAT05956.1| Electron-transferring-flavoprotein dehydrogenase [delta proteobacterium MLMS-1] Length = 553 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 + E C C+ CP + + E +P C+ C C+ +CP D I+ Sbjct: 485 ICREQCRAKYGAPCITFCPAGVYEQIAEQPRPANPSNCLHCKTCQRKCPYDNIR 538 >gi|15897231|ref|NP_341836.1| putative ATPase RIL [Sulfolobus solfataricus P2] gi|284174476|ref|ZP_06388445.1| putative ATPase RIL [Sulfolobus solfataricus 98/2] gi|13813430|gb|AAK40626.1| RNase L inhibitor [Sulfolobus solfataricus P2] gi|261601897|gb|ACX91500.1| ABC transporter related protein [Sulfolobus solfataricus 98/2] Length = 600 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Query: 16 DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDAI 55 +C+ CPVD G + I+ + CI CG+C +CP +AI Sbjct: 19 ECINFCPVD--RSGGKAIELSEIVKGKPVIYEETCIGCGICVKKCPYEAI 66 >gi|89896832|ref|YP_520319.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336280|dbj|BAE85875.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 192 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECP 51 Y ++ C CK CVE CP ++ EN + H +CI C C CP Sbjct: 52 YYLSITCNHCKEPKCVEGCPTQAMHKLENGIVAHDKSKCIGCRYCTWSCP 101 >gi|319941590|ref|ZP_08015916.1| electron transport complex protein rnfB [Sutterella wadsworthensis 3_1_45B] gi|319804960|gb|EFW01802.1| electron transport complex protein rnfB [Sutterella wadsworthensis 3_1_45B] Length = 224 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + E CI C CV CP D L A+ C C +C P CP+D I Sbjct: 95 IRAEECIGCSW--CVRACPTDAIGGSPKHLHAVLEARCTGCSLCAPACPMDCI 145 >gi|307299479|ref|ZP_07579279.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306914878|gb|EFN45265.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 96 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 M +V + C C T C++ CPVD + A I+ C CG C CPV+AI+P++ Sbjct: 1 MPWVREDLCTGC--TLCLKSCPVDGAIVMQGGKAHINNSLCTRCGDCFSACPVNAIRPNS 58 Query: 60 E 60 E Sbjct: 59 E 59 >gi|303229944|ref|ZP_07316718.1| putative ferredoxin [Veillonella atypica ACS-134-V-Col7a] gi|302515310|gb|EFL57278.1| putative ferredoxin [Veillonella atypica ACS-134-V-Col7a] Length = 67 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG I CI CG C CPV A++ Sbjct: 4 LKFDIDDTCVKCGA--CAEDCPVQCITEGATKFIIGSG-CISCGDCYSICPVGAVQ 56 >gi|303231770|ref|ZP_07318492.1| putative ferredoxin [Veillonella atypica ACS-049-V-Sch6] gi|302513561|gb|EFL55581.1| putative ferredoxin [Veillonella atypica ACS-049-V-Sch6] Length = 67 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + + C+ C C E CPV C EG I + CI CG C CPV A++ Sbjct: 4 LKFDIDDTCVKCGA--CAEDCPVQCITEGTTKFII-GNGCIGCGDCYSICPVGAVQ 56 >gi|291280069|ref|YP_003496904.1| molybdopterin oxidoreductase 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] gi|290754771|dbj|BAI81148.1| molybdopterin oxidoreductase, 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] Length = 184 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C C++T C VCP Y+ E + + D+CI C C CP DA Sbjct: 62 QCQHCENTPCASVCPTHATYKTEEGVVLVDYDKCILCKACMTACPYDA 109 >gi|283798986|ref|ZP_06348139.1| formate hydrogenlyase subunit 6 [Clostridium sp. M62/1] gi|291073254|gb|EFE10618.1| formate hydrogenlyase subunit 6 [Clostridium sp. M62/1] Length = 112 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDAIKPDT 59 + CI C CV CP + E LA + CI CG CE CP AIK Sbjct: 34 QQCIGC--AACVNACPSNAL-TVETLLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQ 90 Query: 60 EPGLELWLK 68 E L +W K Sbjct: 91 EYELAVWKK 99 >gi|269139538|ref|YP_003296239.1| anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda EIB202] gi|267985199|gb|ACY85028.1| anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda EIB202] gi|304559427|gb|ADM42091.1| Anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda FL6-60] Length = 205 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ E+ F+ + CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|296137375|ref|YP_003644617.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295797497|gb|ADG32287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 736 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C LC CV CP + L C+ CG+C CP DAI+ EP L LW Sbjct: 607 CTLC--LSCVGACPAGALADNPQTPQLRFIEKNCVQCGLCVKTCPEDAIR--LEPRL-LW 661 >gi|256811300|ref|YP_003128669.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus fervens AG86] gi|256794500|gb|ACV25169.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus fervens AG86] Length = 269 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + NCI C C+E+C D E+F I+P C CG CE C +A++P Sbjct: 62 VYKINNNCIKCGK--CLEICQFDAI---EDF-KINPILCEGCGACELICEFNAVEP 111 >gi|291285965|ref|YP_003502781.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] gi|290883125|gb|ADD66825.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] Length = 165 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 19/97 (19%) Query: 17 CVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C +VCP +C + GE + + CI CG CE CPVDAI E W Sbjct: 67 CQKVCPSECIHIETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWE-----W 121 Query: 67 LKINSEYATQWPNITT----KKESLPSAAKMDGVKQK 99 ++S N+ T K++L K +K+K Sbjct: 122 NTVDSNRDNYVINMKTLSQNYKDNLEGNWKNKHLKKK 158 >gi|291287574|ref|YP_003504390.1| ferredoxin-dependent glutamate synthase [Denitrovibrio acetiphilus DSM 12809] gi|290884734|gb|ADD68434.1| ferredoxin-dependent glutamate synthase [Denitrovibrio acetiphilus DSM 12809] Length = 546 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTK 83 ++ PD C CG C CP AI E G+E K+ S++ T P + K Sbjct: 18 ISYRPDRCTLCGKCVAACPFKAI----EAGVEKRRKVVSDHLTPEPKVEFK 64 >gi|226941414|ref|YP_002796488.1| DmsB [Laribacter hongkongensis HLHK9] gi|226716341|gb|ACO75479.1| DmsB [Laribacter hongkongensis HLHK9] Length = 204 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C +VCP + N F+A+ CI C C+ CP A + + Sbjct: 58 FSYYLSVSCNHCADPACTKVCPTGAMAKDANGFVAVDDAVCIGCKSCQMACPYGAPQYNA 117 Query: 60 EPG 62 + G Sbjct: 118 DTG 120 >gi|62179976|ref|YP_216393.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614201|ref|YP_001588166.1| hypothetical protein SPAB_01943 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551649|ref|ZP_02345403.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995015|ref|ZP_02576105.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240895|ref|ZP_02665827.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168463207|ref|ZP_02697138.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194447767|ref|YP_002045390.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198245067|ref|YP_002215743.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389577|ref|ZP_03216188.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213161804|ref|ZP_03347514.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428559|ref|ZP_03361309.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583929|ref|ZP_03365755.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647222|ref|ZP_03377275.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854959|ref|ZP_03383199.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827395|ref|ZP_06546007.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|62127609|gb|AAX65312.1| Tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363565|gb|ABX67333.1| hypothetical protein SPAB_01943 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194406071|gb|ACF66290.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195634294|gb|EDX52646.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197939583|gb|ACH76916.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602022|gb|EDZ00568.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323655|gb|EDZ11494.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327218|gb|EDZ13982.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339348|gb|EDZ26112.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|312912370|dbj|BAJ36344.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224011|gb|EFX49074.1| Tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714443|gb|EFZ06014.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 244 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|15678306|ref|NP_275421.1| ferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2621329|gb|AAB84784.1| ferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 56 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T V E C+ C +C VCP + E L DEC +C +C CPV A++ Sbjct: 2 ITMKVKEWCMFC--GECAGVCPRNLIEVRETSLKFREDECRECNICIQVCPVRALE 55 >gi|13474498|ref|NP_106067.1| NAD-dependent formate dehydrogenase alpha subunit [Mesorhizobium loti MAFF303099] gi|14025252|dbj|BAB51853.1| NAD-dependent formate dehydrogenase alpha subunit [Mesorhizobium loti MAFF303099] Length = 970 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 16/65 (24%) Query: 9 CILCKHTDCVEVC-----PVDCFYEGENF-----LAIHPD----ECIDCGVCEPECPVDA 54 CI+C + CV C EG F +H D EC+ CG C CP DA Sbjct: 190 CIVC--SRCVRACEEVQGTFALTIEGRGFESRMVAGMHEDFIASECVSCGACVQACPTDA 247 Query: 55 IKPDT 59 ++ T Sbjct: 248 LREKT 252 >gi|150018368|ref|YP_001310622.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149904833|gb|ABR35666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 302 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C C++ C D F + + + +C+ CG+C CP A+K Sbjct: 249 SDKCIKCGA--CIKRCHFDVFTKVDGVIKSDISKCVGCGICSNSCPTKALK 297 >gi|58259273|ref|XP_567049.1| hypothetical protein CNA07330 [Cryptococcus neoformans var. neoformans JEC21] gi|134107419|ref|XP_777594.1| hypothetical protein CNBA7150 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260288|gb|EAL22947.1| hypothetical protein CNBA7150 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223186|gb|AAW41230.1| hypothetical protein CNA07330 [Cryptococcus neoformans var. neoformans JEC21] Length = 603 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 11/56 (19%) Query: 12 CKHTDCVEVCPVDC--FYEGENFLAIHPDE---------CIDCGVCEPECPVDAIK 56 CK C + C C G+ + ++P++ CI CG+C +CP DAI+ Sbjct: 16 CKPKRCRQECKRSCPVVKMGKLCIEVNPNDKKAFISEELCIGCGICVKKCPFDAIQ 71 >gi|256826549|ref|YP_003150508.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582692|gb|ACU93826.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 199 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 22/51 (43%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C+ VCPV+ + ++ CI C +C CP AI P Sbjct: 50 TCHHCAGAPCLAVCPVNAITRENGSIQVNEQTCIGCKLCGIVCPFGAIHPS 100 >gi|238920366|ref|YP_002933881.1| dimethylsulfoxide reductase, chain B, [Edwardsiella ictaluri 93-146] gi|238869935|gb|ACR69646.1| dimethylsulfoxide reductase, chain B, putative [Edwardsiella ictaluri 93-146] Length = 205 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ E+ F+ + CI C C CP A + + Sbjct: 59 FAYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 + G Sbjct: 119 QKG 121 >gi|261343672|ref|ZP_05971317.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rustigianii DSM 4541] gi|282568055|gb|EFB73590.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rustigianii DSM 4541] Length = 204 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 >gi|289207279|ref|YP_003459345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288942910|gb|ADC70609.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 82 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/23 (69%), Positives = 18/23 (78%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP +AI P E Sbjct: 7 DECINCDVCEPECPNEAIYPGDE 29 >gi|254506838|ref|ZP_05118977.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus 16] gi|219550123|gb|EED27109.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus 16] Length = 230 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 ++C C++ CV VCP Y+ E + +H ++C+ CG C CP Sbjct: 97 KSCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACP 143 >gi|168263787|ref|ZP_02685760.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194445522|ref|YP_002040639.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197262048|ref|ZP_03162122.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194404185|gb|ACF64407.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197240303|gb|EDY22923.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205347598|gb|EDZ34229.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 244 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|225164850|ref|ZP_03727073.1| ferredoxin [Opitutaceae bacterium TAV2] gi|224800539|gb|EEG18912.1| ferredoxin [Opitutaceae bacterium TAV2] Length = 56 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M+Y +T E C+ C C+ CP++ G + I P CIDCG C CP A Sbjct: 1 MSYQITPEKCVACGA--CIADCPMEAIKAGSPYR-IDPKLCIDCGACADACPESA 52 >gi|126736053|ref|ZP_01751797.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] gi|126714610|gb|EBA11477.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] Length = 167 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 44 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 89 >gi|90022045|ref|YP_527872.1| NADH:ubiquinone oxidoreductase subunit RnfB [Saccharophagus degradans 2-40] gi|89951645|gb|ABD81660.1| electron transport complex, RnfABCDGE type, B subunit [Saccharophagus degradans 2-40] Length = 206 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 114 VAYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCI 167 >gi|73540385|ref|YP_294905.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117798|gb|AAZ60061.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 717 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 12/57 (21%) Query: 11 LCKH--------TDCVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H T C+++C +++G+ + + P+ C+ CG C CP AI Sbjct: 328 LCAHGRNQTTGCTACIDICSTQAIRSQWHDGKGRIEVTPNLCMGCGACTTVCPSGAI 384 >gi|14590719|ref|NP_142789.1| putative ATPase RIL [Pyrococcus horikoshii OT3] gi|3257270|dbj|BAA29953.1| 590aa long hypothetical transport protein [Pyrococcus horikoshii OT3] Length = 590 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 12 CKHTDCVEVCPVD-------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C H C VCPV+ E N I C CG+C +CP AI Sbjct: 16 CGHFLCERVCPVNRMGGEAIIIDEENNRPIIQEASCTGCGICVHKCPFKAI 66 >gi|302389364|ref|YP_003825185.1| iron-sulfur cluster-binding protein CooF [Thermosediminibacter oceani DSM 16646] gi|302199992|gb|ADL07562.1| iron-sulfur cluster-binding protein CooF [Thermosediminibacter oceani DSM 16646] Length = 138 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 E C LC + C+ CP E + + C CG+C+ CP AI Sbjct: 54 VEQCSLCSNPKCISACPAGALSRSEAGIIKVDTPSCNKCGMCQDACPFGAI 104 >gi|284048866|ref|YP_003399205.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] gi|283953087|gb|ADB47890.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] Length = 504 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y++T+ C C C+ CP + I D CI+CG C+ CP A+ P Sbjct: 105 YMITDVCRRCLTHRCMNGCPKKAISVYQGRAHIDYDMCIECGNCKRACPYGAVVEIARP 163 >gi|260597696|ref|YP_003210267.1| formate dehydrogenase-H ferredoxin subunit [Cronobacter turicensis z3032] gi|260216873|emb|CBA30415.1| Electron transport protein hydN [Cronobacter turicensis z3032] Length = 197 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ P Sbjct: 74 CRQCEDAPCASVCPNGAISRDGDFVHVHQQRCIGCKTCVVACPYGAMEVVVRP 126 >gi|297570339|ref|YP_003691683.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296926254|gb|ADH87064.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 338 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 17/39 (43%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C CP Y GE + + + C C VC CP A+ Sbjct: 38 CARACPPQAIYPGEGTVRLESERCTGCLVCTAACPTGAL 76 >gi|269837680|ref|YP_003319908.1| NADH-quinone oxidoreductase, chain I [Sphaerobacter thermophilus DSM 20745] gi|269786943|gb|ACZ39086.1| NADH-quinone oxidoreductase, chain I [Sphaerobacter thermophilus DSM 20745] Length = 148 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 12/62 (19%) Query: 9 CILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIKPD 58 C+ C C +CP C EG+ LA + C+ CG+C CPVDAI Sbjct: 52 CVACGL--CARICPTSCLEMTVVPSEEGDRELAEFILRSGRCLFCGMCAQVCPVDAITMS 109 Query: 59 TE 60 E Sbjct: 110 GE 111 >gi|283795361|ref|ZP_06344514.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|291077019|gb|EFE14383.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|295091066|emb|CBK77173.1| hypothetical protein [Clostridium cf. saccharolyticum K10] Length = 262 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C C +VCP CF+ EG+ + P CI C C CP+ AI Sbjct: 174 YQITDECIGC--GICQKVCPKGCFHLEGQKSIW-EPAGCISCMACIHACPMAAI 224 >gi|225571993|ref|ZP_03780857.1| hypothetical protein RUMHYD_00287 [Blautia hydrogenotrophica DSM 10507] gi|225040526|gb|EEG50772.1| hypothetical protein RUMHYD_00287 [Blautia hydrogenotrophica DSM 10507] Length = 368 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V + CI CK C ++C D + AI+ D+C+ CG C CP DAI P ++ Sbjct: 191 HVNQKLCIGCK--KCAQICAHDAPEFKDLKAAINHDKCVGCGRCLGVCPKDAICPASD 246 >gi|168239267|ref|ZP_02664325.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734836|ref|YP_002114400.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710338|gb|ACF89559.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288003|gb|EDY27390.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322615129|gb|EFY12052.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619972|gb|EFY16845.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622283|gb|EFY19128.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627806|gb|EFY24596.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633095|gb|EFY29838.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636659|gb|EFY33362.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641147|gb|EFY37789.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644916|gb|EFY41449.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650245|gb|EFY46659.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655820|gb|EFY52122.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660146|gb|EFY56385.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665288|gb|EFY61476.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669545|gb|EFY65693.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673471|gb|EFY69573.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677399|gb|EFY73463.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679938|gb|EFY75977.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687410|gb|EFY83382.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192363|gb|EFZ77594.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198618|gb|EFZ83719.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203099|gb|EFZ88130.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208664|gb|EFZ93602.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213821|gb|EFZ98599.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217641|gb|EGA02356.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323218989|gb|EGA03499.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223656|gb|EGA07966.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229443|gb|EGA13566.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232666|gb|EGA16762.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240296|gb|EGA24340.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242716|gb|EGA26737.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245927|gb|EGA29915.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252504|gb|EGA36348.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259120|gb|EGA42765.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260073|gb|EGA43698.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267163|gb|EGA50648.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271514|gb|EGA54935.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 244 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|168233577|ref|ZP_02658635.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470968|ref|ZP_03076952.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457332|gb|EDX46171.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332342|gb|EDZ19106.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 244 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|167470482|ref|ZP_02335186.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis FV-1] Length = 190 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 111 VAFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 165 >gi|55378233|ref|YP_136083.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula marismortui ATCC 43049] gi|55230958|gb|AAV46377.1| NADH dehydrogenase/oxidoreductase-like protein [Haloarcula marismortui ATCC 43049] Length = 153 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCP-------VDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ C VCP +D GE + +H +CI C +CE CP DAI Sbjct: 45 ERCIWCRQ--CENVCPNNTIQIVMDEQRNGEQY-NLHIGQCIYCRLCEEVCPTDAI 97 >gi|147668770|ref|YP_001213588.1| reductive dehalogenase [Dehalococcoides sp. BAV1] gi|146269718|gb|ABQ16710.1| reductive dehalogenase [Dehalococcoides sp. BAV1] Length = 480 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 16/29 (55%) Query: 40 CIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CIDCG C CPV AI E ++W K Sbjct: 337 CIDCGRCASVCPVSAINSSRESSWDIWPK 365 >gi|77463081|ref|YP_352585.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides 2.4.1] gi|126461953|ref|YP_001043067.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17029] gi|221638937|ref|YP_002525199.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides KD131] gi|332557954|ref|ZP_08412276.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] gi|115502510|sp|Q3J3F0|NUOI1_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|156632691|sp|A3PIX9|NUOI1_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|77387499|gb|ABA78684.1| Subunit of NADH-ubiquinone oxidoreductase (Complex I) that contains 2 Fe-S centers [Rhodobacter sphaeroides 2.4.1] gi|126103617|gb|ABN76295.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17029] gi|221159718|gb|ACM00698.1| NADH-quinone oxidoreductase subunit I 1 [Rhodobacter sphaeroides KD131] gi|332275666|gb|EGJ20981.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] Length = 167 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 44 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 89 >gi|94309960|ref|YP_583170.1| ferredoxin [Cupriavidus metallidurans CH34] gi|93353812|gb|ABF07901.1| electron transport complex, RnfABCDGE type, B subunit [Cupriavidus metallidurans CH34] Length = 279 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C T C++ CPVD + + PD C C +C CPVD I+ Sbjct: 91 CIGC--TLCIQACPVDAIVGAPKQMHTVLPDWCTGCDLCVTPCPVDCIE 137 >gi|330898583|gb|EGH30002.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 291 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C++ CPVD + + DEC C +C CP +K Sbjct: 83 VAFIREAECIGC--TKCIQACPVDAILGASRLMHTVIIDECTGCDLCVAPCPGIVLK 137 >gi|330805166|ref|XP_003290557.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium purpureum] gi|325079303|gb|EGC32909.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium purpureum] Length = 203 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 18 VEVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI + EP Sbjct: 79 FEKTPISPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEP 125 >gi|284007051|emb|CBA72326.1| glutamate synthase (NADPH) small chain [Arsenophonus nasoniae] Length = 603 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C+ CPVD + + + CI C C CP AI Sbjct: 56 CRHCNNAPCITSCPVDALRFVSATVQLDQNRCIGCKSCIIACPFGAI 102 >gi|284006931|emb|CBA72203.1| electron transport protein [Arsenophonus nasoniae] Length = 181 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ + P Sbjct: 58 CRQCEDAPCANVCPNGAITRESDFVHVHQARCIGCKTCVVACPYGAMEVVSRP 110 >gi|295675400|ref|YP_003603924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] gi|295435243|gb|ADG14413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] Length = 85 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|257063355|ref|YP_003143027.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] gi|256791008|gb|ACV21678.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] Length = 401 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 7/57 (12%) Query: 9 CILCKHTDCVEVCPVD--CFYEGENFLA---IHPDECIDCGVCEPECPVDAIKPDTE 60 C CK C CP C Y EN +A + EC+ CG+C+ CP AIK T+ Sbjct: 302 CKSCKM--CAVFCPTGAICKYRDENGVAGIEHYVAECVHCGLCQDICPAGAIKSVTQ 356 >gi|288869815|ref|ZP_05976441.2| polyferredoxin [Methanobrevibacter smithii DSM 2374] gi|288860364|gb|EFC92662.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] Length = 343 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLELW 66 CI CK C++ CPV + E + + ++P +CI CG C CPV+ A+K ++ Sbjct: 128 CIRCKK--CMKQCPVGAIHVEDDGKVVVNPFKCISCGECLDVCPVNGAMKGVFVDNIQDQ 185 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 ++ ++ T KE A K D + Q Sbjct: 186 KELIAQVVTFLEKYINNKEEDLRALKKDRLLQ 217 >gi|222445705|ref|ZP_03608220.1| hypothetical protein METSMIALI_01346 [Methanobrevibacter smithii DSM 2375] gi|261349746|ref|ZP_05975163.1| tungsten formylmethanofuran dehydrogenase, subunit F [Methanobrevibacter smithii DSM 2374] gi|222435270|gb|EEE42435.1| hypothetical protein METSMIALI_01346 [Methanobrevibacter smithii DSM 2375] gi|288861701|gb|EFC93999.1| tungsten formylmethanofuran dehydrogenase, subunit F [Methanobrevibacter smithii DSM 2374] Length = 365 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 12/68 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENF----LAIHPDECIDCGVCEPECPVDAIK 56 + CI CK C CP D E +N +++ D+C+ CG+C+ CP +AI Sbjct: 134 DKCIYCKR--CETACPQDAITVMRKLPERQNLVSGEISVSDDDCVYCGICQELCPAEAIV 191 Query: 57 PDTEPGLE 64 D G E Sbjct: 192 VDNTTGQE 199 >gi|197285565|ref|YP_002151437.1| anaerobic dimethyl sulfoxide reductase subunit B [Proteus mirabilis HI4320] gi|227356062|ref|ZP_03840453.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|194683052|emb|CAR43553.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis HI4320] gi|227163839|gb|EEI48747.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 205 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV CP ++ E + ++ D C+ C CE CP A + D Sbjct: 59 SYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDE 118 Query: 60 EPGL 63 + L Sbjct: 119 KKKL 122 >gi|170691834|ref|ZP_02882998.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia graminis C4D1M] gi|170143118|gb|EDT11282.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia graminis C4D1M] Length = 344 Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + + C C +C P CPVD I Sbjct: 128 CIGC--TLCMQACPVDAIVGAPKHMHTVVAELCTGCDLCVPPCPVDCI 173 >gi|162148803|ref|YP_001603264.1| NADH dehydrogenase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|209545449|ref|YP_002277678.1| NADH dehydrogenase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|161787380|emb|CAP56975.1| NADH-quinone oxidoreductase chain I [Gluconacetobacter diazotrophicus PAl 5] gi|209533126|gb|ACI53063.1| NADH-quinone oxidoreductase, chain I [Gluconacetobacter diazotrophicus PAl 5] Length = 162 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP +AI ++EP Sbjct: 39 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEATCPAEAITIESEP 84 >gi|156934238|ref|YP_001438154.1| hypothetical protein ESA_02068 [Cronobacter sakazakii ATCC BAA-894] gi|156532492|gb|ABU77318.1| hypothetical protein ESA_02068 [Cronobacter sakazakii ATCC BAA-894] Length = 162 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ + ++ C+ C +C CP AI+ L + Sbjct: 12 CHHCEDAPCAQVCPVNAITREAGAIQLNESLCVSCKLCGIACPFGAIEFSGSRPLHIPAN 71 Query: 69 INS 71 +NS Sbjct: 72 VNS 74 >gi|150398828|ref|YP_001322595.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150011531|gb|ABR53983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 397 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 16/63 (25%) Query: 15 TDCVEVCPVDCFYEG---------ENFLA-----IHPDECIDCGVCEPECPVDAIKPDTE 60 T CV++CP D Y G NF+ + D C+ CG+C PECPV +I + E Sbjct: 98 TKCVDICPDD--YVGMEGIIEPAKRNFVIPKEPIVVTDTCVGCGICVPECPVASISLENE 155 Query: 61 PGL 63 + Sbjct: 156 KAV 158 >gi|21228427|ref|NP_634349.1| ech hydrogenase subunit [Methanosarcina mazei Go1] gi|20906904|gb|AAM32021.1| Ech Hydrogenase, Subunit [Methanosarcina mazei Go1] Length = 126 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 21/30 (70%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + E + + I+P+ CI CG+C+ +CP DAI Sbjct: 31 YKEFKGRIVINPENCILCGLCQKKCPPDAI 60 >gi|332088844|gb|EGI93956.1| dimethylsulfoxide reductase, chain B [Shigella boydii 5216-82] Length = 205 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|327401724|ref|YP_004342563.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus veneficus SNP6] gi|327317232|gb|AEA47848.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus veneficus SNP6] Length = 756 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Query: 23 VDCFYEGENFLA--------IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 VD + E NF+A + P CI CG C CPVD ++ + G+ I+ E+ Sbjct: 218 VDIWKENGNFVARIRKAPQYVDPSRCISCGKCSEVCPVD-VENSFDCGMSKRKAIDKEFK 276 Query: 75 TQWPNI 80 P+I Sbjct: 277 LAIPDI 282 >gi|288574747|ref|ZP_06393104.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570488|gb|EFC92045.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] Length = 594 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C + CPV+C + + I D C+ CG C +CP DAI Sbjct: 552 CAKNCPVNCIDGDRKTQFVIDEDACVRCGTCYDKCPFDAI 591 >gi|238759103|ref|ZP_04620272.1| Hydrogenase-2 operon protein hybA [Yersinia aldovae ATCC 35236] gi|238702651|gb|EEP95199.1| Hydrogenase-2 operon protein hybA [Yersinia aldovae ATCC 35236] Length = 329 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H PD C C C CP + K D Sbjct: 100 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYD 155 >gi|268679825|ref|YP_003304256.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617856|gb|ACZ12221.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 154 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 26/63 (41%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C+ C+ +CP E F+ + C+ CG C CP AI E L Sbjct: 59 QCMHCETPSCLAICPHGVISLEEGFIKLDETACVGCGCCALACPYGAISMVKEDERVYAL 118 Query: 68 KIN 70 K N Sbjct: 119 KCN 121 >gi|254173867|ref|ZP_04880538.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thermococcus sp. AM4] gi|214032116|gb|EEB72947.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thermococcus sp. AM4] Length = 237 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + V C C+ C++ CP + E F+ ++P+ CI C +C CP P EP Sbjct: 89 FNVPMRCQHCEDAPCMKACPTGAISKTEEGFVVLNPNMCIGCLMCVMACPFG--HPKYEP 146 Query: 62 GLELWLKINS 71 ++ LK +S Sbjct: 147 EYKVVLKCDS 156 >gi|167770144|ref|ZP_02442197.1| hypothetical protein ANACOL_01487 [Anaerotruncus colihominis DSM 17241] gi|167667466|gb|EDS11596.1| hypothetical protein ANACOL_01487 [Anaerotruncus colihominis DSM 17241] Length = 564 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 20/38 (52%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ CPV +N I P+ECI CG C CP +A Sbjct: 18 CIRSCPVKSIRFSDNQAKIIPEECILCGRCVVVCPQNA 55 >gi|77920299|ref|YP_358114.1| NADH dehydrogenase I subunit F [Pelobacter carbinolicus DSM 2380] gi|77546382|gb|ABA89944.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] Length = 488 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ + C+ C T C ++CPV+C + + I +CI CG C+ +C +AI Sbjct: 435 ILKDKCVGC--TLCAKICPVECISGQVKQPHVIDQSKCIKCGACQDKCKFEAI 485 >gi|33594448|ref|NP_882092.1| ferredoxin [Bordetella pertussis Tohama I] gi|33597856|ref|NP_885499.1| ferredoxin [Bordetella parapertussis 12822] gi|33564523|emb|CAE43838.1| putative ferredoxin [Bordetella pertussis Tohama I] gi|33574285|emb|CAE38618.1| putative ferredoxin [Bordetella parapertussis] gi|332383859|gb|AEE68706.1| ferredoxin [Bordetella pertussis CS] Length = 213 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 + V+ E +CI C T C++ CPVD + + D C C +C CPVD I D Sbjct: 78 LVAVIDEAHCIGC--TLCMKACPVDAIVGANKRMHTVLADWCTGCDLCVAPCPVDCI--D 133 Query: 59 TEPGLELW 66 P +W Sbjct: 134 MRPAARVW 141 >gi|26246921|ref|NP_752961.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli CFT073] gi|110641095|ref|YP_668825.1| anaerobic dimethyl sulfoxide reductase, subunit B [Escherichia coli 536] gi|191172116|ref|ZP_03033660.1| dimethylsulfoxide reductase, B subunit [Escherichia coli F11] gi|227884138|ref|ZP_04001943.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 83972] gi|300978541|ref|ZP_07174294.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 45-1] gi|300983194|ref|ZP_07176473.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 200-1] gi|301047846|ref|ZP_07194896.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 185-1] gi|26107321|gb|AAN79504.1|AE016758_108 Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli CFT073] gi|110342687|gb|ABG68924.1| anaerobic dimethyl sulfoxide reductase, subunit B [Escherichia coli 536] gi|190907643|gb|EDV67238.1| dimethylsulfoxide reductase, B subunit [Escherichia coli F11] gi|227838890|gb|EEJ49356.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 83972] gi|300300274|gb|EFJ56659.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 185-1] gi|300306958|gb|EFJ61478.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 200-1] gi|300409620|gb|EFJ93158.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 45-1] gi|307552737|gb|ADN45512.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli ABU 83972] gi|315291254|gb|EFU50614.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 153-1] gi|324012985|gb|EGB82204.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 60-1] Length = 205 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 TKG 121 >gi|331006088|ref|ZP_08329424.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC1989] gi|330420125|gb|EGG94455.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [gamma proteobacterium IMCC1989] Length = 484 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV+VCPVD +G + ECI+CG+C C Sbjct: 275 DCIDCSW--CVQVCPVDIDIRDGLQY------ECINCGLCVDAC 310 >gi|260466533|ref|ZP_05812722.1| formate dehydrogenase, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259029682|gb|EEW30969.1| formate dehydrogenase, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 970 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 16/65 (24%) Query: 9 CILCKHTDCVEVC-----PVDCFYEGENF-----LAIHPD----ECIDCGVCEPECPVDA 54 CI+C + CV C EG F +H D EC+ CG C CP DA Sbjct: 190 CIVC--SRCVRACEEVQGTFALTIEGRGFESRMVAGMHEDFIASECVSCGACVQACPTDA 247 Query: 55 IKPDT 59 ++ T Sbjct: 248 LREKT 252 >gi|288931386|ref|YP_003435446.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893634|gb|ADC65171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 558 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V ENC LC C +CP + + + L CI+C +CE CP +AI Sbjct: 431 VNENCTLC--DTCHRICPNEALKKEKGRLTFIHGLCINCKLCEKLCPENAI 479 >gi|256424913|ref|YP_003125566.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chitinophaga pinensis DSM 2588] gi|256039821|gb|ACU63365.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chitinophaga pinensis DSM 2588] Length = 115 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|222444431|ref|ZP_03606946.1| hypothetical protein METSMIALI_00042 [Methanobrevibacter smithii DSM 2375] gi|222433996|gb|EEE41161.1| hypothetical protein METSMIALI_00042 [Methanobrevibacter smithii DSM 2375] Length = 274 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 F+ + +AI P CI C +C +CPVDAI+P Sbjct: 37 FFSQKEIIAIAP-RCIRCNMCVDQCPVDAIEP 67 >gi|194446804|ref|YP_002043530.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405467|gb|ACF65689.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 223 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAANGIVDVNPDLCVGCQYCIAACP 136 >gi|218779418|ref|YP_002430736.1| adenylylsulfate reductase, beta subunit [Desulfatibacillum alkenivorans AK-01] gi|218760802|gb|ACL03268.1| Adenylylsulfate reductase, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 145 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 14/113 (12%) Query: 2 TYVVTENCILCK---HTDCVEVCPVDCFYEGENFLAIH---PDECIDCGVCEPECPVDAI 55 ++V+ E C CK T C+ +CP D N + + PD+C +C C CP AI Sbjct: 3 SFVIQEKCDGCKGGEKTACMYICPNDLMVLDPNAMKAYNQEPDQCWECFSCVKICPTQAI 62 Query: 56 K----PDTEP-GLELWLKINSE---YATQWPNITTKKESLPSAAKMDGVKQKY 100 + D P G + + +E + ++ N T K+ P +G Y Sbjct: 63 EVRGYSDFVPLGSSIMPMMGTEDVMWTCKFRNGTVKRFKFPIRTTAEGSANAY 115 >gi|257075654|ref|ZP_05570015.1| ferredoxin like protein [Ferroplasma acidarmanus fer1] Length = 95 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV +CP + F N + I + C++CG CP D I Sbjct: 41 CVSICPANVFTWENNRIIIGYENCVECGASRIACPYDNI 79 >gi|87120921|ref|ZP_01076813.1| ferredoxin (4Fe-4S) [Marinomonas sp. MED121] gi|86163759|gb|EAQ65032.1| ferredoxin (4Fe-4S) [Marinomonas sp. MED121] Length = 83 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 15/20 (75%), Positives = 17/20 (85%) Query: 38 DECIDCGVCEPECPVDAIKP 57 DECI+C VCEPECP +AI P Sbjct: 7 DECINCDVCEPECPNEAIYP 26 >gi|22125976|ref|NP_669399.1| electron transport complex protein RnfB [Yersinia pestis KIM 10] gi|45441843|ref|NP_993382.1| electron transport complex protein RnfB [Yersinia pestis biovar Microtus str. 91001] gi|108807599|ref|YP_651515.1| electron transport complex protein RnfB [Yersinia pestis Antiqua] gi|108811875|ref|YP_647642.1| electron transport complex protein RnfB [Yersinia pestis Nepal516] gi|149365836|ref|ZP_01887871.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|162420711|ref|YP_001606697.1| electron transport complex protein RnfB [Yersinia pestis Angola] gi|165927379|ref|ZP_02223211.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938163|ref|ZP_02226722.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166010629|ref|ZP_02231527.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166210969|ref|ZP_02237004.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167400916|ref|ZP_02306422.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420206|ref|ZP_02311959.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425000|ref|ZP_02316753.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929341|ref|YP_002347216.1| electron transport complex protein RnfB [Yersinia pestis CO92] gi|229894931|ref|ZP_04510109.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|229897673|ref|ZP_04512829.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898319|ref|ZP_04513466.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|229902178|ref|ZP_04517299.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|270490650|ref|ZP_06207724.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis KIM D27] gi|294503722|ref|YP_003567784.1| electron transport complex protein RnfB [Yersinia pestis Z176003] gi|24638185|sp|Q8ZEC9|RNFB_YERPE RecName: Full=Electron transport complex protein rnfB gi|122979617|sp|Q1C7K2|RNFB_YERPA RecName: Full=Electron transport complex protein rnfB gi|123073406|sp|Q1CIY8|RNFB_YERPN RecName: Full=Electron transport complex protein rnfB gi|226735436|sp|A9R8U7|RNFB_YERPG RecName: Full=Electron transport complex protein rnfB gi|21958920|gb|AAM85650.1|AE013811_3 hypothetical protein y2086 [Yersinia pestis KIM 10] gi|45436705|gb|AAS62259.1| putative iron-sulfur protein [Yersinia pestis biovar Microtus str. 91001] gi|108775523|gb|ABG18042.1| iron-sulfur protein [Yersinia pestis Nepal516] gi|108779512|gb|ABG13570.1| putative iron-sulfur protein [Yersinia pestis Antiqua] gi|115347952|emb|CAL20874.1| putative iron-sulfur protein [Yersinia pestis CO92] gi|149292249|gb|EDM42323.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|162353526|gb|ABX87474.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis Angola] gi|165913824|gb|EDR32442.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165920645|gb|EDR37893.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165990331|gb|EDR42632.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166208149|gb|EDR52629.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166961901|gb|EDR57922.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049769|gb|EDR61177.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056187|gb|EDR65965.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681074|gb|EEO77169.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|229688609|gb|EEO80678.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|229694010|gb|EEO84059.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702026|gb|EEO90047.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|262362158|gb|ACY58879.1| electron transport complex protein RnfB [Yersinia pestis D106004] gi|262365491|gb|ACY62048.1| electron transport complex protein RnfB [Yersinia pestis D182038] gi|270339154|gb|EFA49931.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis KIM D27] gi|294354181|gb|ADE64522.1| electron transport complex protein RnfB [Yersinia pestis Z176003] gi|320014910|gb|ADV98481.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 188 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 163 >gi|320086134|emb|CBY95908.1| Uncharacterized ferredoxin-like protein ydhX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 244 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|307545319|ref|YP_003897798.1| electron transporter RnfB [Halomonas elongata DSM 2581] gi|307217343|emb|CBV42613.1| K03616 electron transport complex protein RnfB [Halomonas elongata DSM 2581] Length = 325 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 75 VARIREDECIGC--TKCIQACPVDAILGAAKQMHTVIESECTGCELCVAPCPVDCI 128 >gi|307728378|ref|YP_003905602.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1003] gi|323524668|ref|YP_004226821.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1001] gi|307582913|gb|ADN56311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1003] gi|323381670|gb|ADX53761.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1001] Length = 85 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|157374447|ref|YP_001473047.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316821|gb|ABV35919.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 211 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + +C C CV+ CP ++ + + + D CI C C CP DA P Sbjct: 62 FAYYTSISCNHCSEPVCVKACPTGAMHKRSKDGLVHVSSDLCIGCSSCAKACPYDA--PQ 119 Query: 59 TEPGLELWLK 68 +P ++ +K Sbjct: 120 LDPVKKVMVK 129 >gi|118475180|ref|YP_891369.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. fetus 82-40] gi|261886061|ref|ZP_06010100.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. venerealis str. Azul-94] gi|156633515|sp|A0RMD6|NUOI_CAMFF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|118414406|gb|ABK82826.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. fetus 82-40] Length = 165 Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 13/62 (20%) Query: 9 CILCKHTDCVEVCPVDCFY------EGE-----NFLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C C CP +C + EG + I EC+ CG+C CP DAI+ Sbjct: 78 CVACDM--CATACPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRM 135 Query: 58 DT 59 DT Sbjct: 136 DT 137 >gi|310816705|ref|YP_003964669.1| NADH dehydrogenase subunit I [Ketogulonicigenium vulgare Y25] gi|308755440|gb|ADO43369.1| NADH dehydrogenase subunit I [Ketogulonicigenium vulgare Y25] Length = 164 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKVPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIDAEP 86 >gi|288932558|ref|YP_003436618.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894806|gb|ADC66343.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 97 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + E CI C C ++CP E +PD+C C C ECP AI Sbjct: 1 MIKIYREKCISC--GKCEKICPSSAIKMNEFPQLAYPDKCWHCAACVKECPAKAI 53 >gi|261402831|ref|YP_003247055.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261369824|gb|ACX72573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 391 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 14/60 (23%) Query: 8 NCILCKHTDCVEVCPVDCF------------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C+LC+ C++VCP++ + + D+C+ CGVC PECPV AI Sbjct: 97 HCVLCQK--CIDVCPIEIISIPGVIDKPKKEVKAPKEPIVVTDDCVGCGVCVPECPVGAI 154 >gi|229523599|ref|ZP_04413004.1| iron-sulfur cluster-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337180|gb|EEO02197.1| iron-sulfur cluster-binding protein [Vibrio cholerae bv. albensis VL426] Length = 570 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 436 DCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 483 >gi|261404674|ref|YP_003240915.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Paenibacillus sp. Y412MC10] gi|261281137|gb|ACX63108.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. Y412MC10] Length = 112 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V + CI C CV+VCP + F E L + ++C C +CE CP DA+ Sbjct: 5 VSQQRCIECGL--CVKVCPTNVFDRTETGLPVIARQEDCQTCFICEAYCPADAL 56 >gi|187251479|ref|YP_001875961.1| putative Indolepyruvate ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] gi|186971639|gb|ACC98624.1| Putative indolepyruvate ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] Length = 56 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V NC C+ T CPV E + I P CIDCG C CPV I Sbjct: 9 VCINCGACEGT-----CPVSAISEQDGKRVIDPAVCIDCGACVSSCPVSCIS 55 >gi|50121944|ref|YP_051111.1| NADH dehydrogenase subunit I [Pectobacterium atrosepticum SCRI1043] gi|81693182|sp|Q6D2S4|NUOI_ERWCT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|49612470|emb|CAG75920.1| NADH-quinone oxidoreductase chain I [Pectobacterium atrosepticum SCRI1043] Length = 180 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRVNFSRCIFCGFCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|119776035|ref|YP_928775.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Shewanella amazonensis SB2B] gi|119768535|gb|ABM01106.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Shewanella amazonensis SB2B] Length = 230 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+ CV VCP Y + +A++ D C+ C C CP V I P+T Sbjct: 98 SCQHCEAAPCVRVCPTGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETR 154 >gi|51596492|ref|YP_070683.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis IP 32953] gi|145598187|ref|YP_001162263.1| electron transport complex protein RnfB [Yersinia pestis Pestoides F] gi|153949540|ref|YP_001400870.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis IP 31758] gi|170024242|ref|YP_001720747.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis YPIII] gi|186895542|ref|YP_001872654.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis PB1/+] gi|51589774|emb|CAH21404.1| putative iron-sulfur protein [Yersinia pseudotuberculosis IP 32953] gi|145209883|gb|ABP39290.1| iron-sulfur protein [Yersinia pestis Pestoides F] gi|152961035|gb|ABS48496.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis IP 31758] gi|169750776|gb|ACA68294.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis YPIII] gi|186698568|gb|ACC89197.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis PB1/+] Length = 207 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 163 >gi|325265432|ref|ZP_08132155.1| Fe-hydrogenase, beta subunit [Clostridium sp. D5] gi|324029290|gb|EGB90582.1| Fe-hydrogenase, beta subunit [Clostridium sp. D5] Length = 140 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI-KP 57 M++ +T+ CI C T C ++CPV EG + I+ C++CGVC C AI Sbjct: 1 MSFFITDKCIGC--TLCRKLCPVG-AVEGNLKERHRINEKRCVECGVCGRVCKQKAILDQ 57 Query: 58 DTEPGLEL 65 D +P LE+ Sbjct: 58 DGKPVLEV 65 >gi|319937834|ref|ZP_08012236.1| pyruvate formate-lyase 2-activating enzyme [Coprobacillus sp. 29_1] gi|319807064|gb|EFW03680.1| pyruvate formate-lyase 2-activating enzyme [Coprobacillus sp. 29_1] Length = 298 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C+ CV VCP N + + +C+ C C CP DA+ + E Sbjct: 53 DKCIHCQ--QCVHVCPHGALTHQNNRILVDAKKCVGCLTCVHACPQDALTHEGE 104 >gi|326791479|ref|YP_004309300.1| NADH dehydrogenase (quinone) [Clostridium lentocellum DSM 5427] gi|326542243|gb|ADZ84102.1| NADH dehydrogenase (quinone) [Clostridium lentocellum DSM 5427] Length = 595 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + Y +TE C C T C VCPV L I ++CI CG C +C AI Sbjct: 539 LQYHITEQCKGC--TACARVCPVGAISGTVKALHTIDQEKCIKCGACMDKCKFAAI 592 >gi|284051681|ref|ZP_06381891.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Arthrospira platensis str. Paraca] gi|291570294|dbj|BAI92566.1| pyruvate flavodoxin oxidoreductase [Arthrospira platensis NIES-39] Length = 1193 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%) Query: 24 DCFYEGENF-LAIHPDECIDCGVCEPECPV--------DAIKPDTEPGLELWLKINSEYA 74 D +EG+ F + + P++C CG+C CP AI + +P + + N E+ Sbjct: 729 DKAFEGQKFTIQVSPEDCTGCGICVDVCPAKNKSMPSKKAINMEYQPPIRATERDNWEFF 788 Query: 75 TQWPN 79 PN Sbjct: 789 LNLPN 793 >gi|268589520|ref|ZP_06123741.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rettgeri DSM 1131] gi|291315189|gb|EFE55642.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rettgeri DSM 1131] Length = 204 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 >gi|167552275|ref|ZP_02346028.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323057|gb|EDZ10896.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 223 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAANGIVDVNPDLCVGCQYCIAACP 136 >gi|18313500|ref|NP_560167.1| formate dehydrogenase beta subunit [Pyrobaculum aerophilum str. IM2] gi|18161039|gb|AAL64349.1| formate dehydrogenase beta subunit [Pyrobaculum aerophilum str. IM2] Length = 281 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 GE + I+ +ECI CG CE CP D K ++ Sbjct: 115 GEGAVVINKEECIGCGYCEAACPYDVPKKGSD 146 >gi|89896531|ref|YP_520018.1| hypothetical protein DSY3785 [Desulfitobacterium hafniense Y51] gi|89335979|dbj|BAE85574.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 90 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 24/54 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C C+ CP CF + + + C++CG C C +A+K D G Sbjct: 28 CKSCGQQACLYFCPAGCFSLVDREVKFQYEGCLECGTCRVMCAHNALKWDYPQG 81 >gi|282855938|ref|ZP_06265229.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] gi|282586157|gb|EFB91434.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] Length = 596 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C++ CP F + E ++I +C+ C VC CPV AI Sbjct: 543 EKCIGCKK--CLQTGCPALSFDKYERKVSIDRMQCVGCTVCAQVCPVKAI 590 >gi|255533088|ref|YP_003093460.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pedobacter heparinus DSM 2366] gi|255346072|gb|ACU05398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pedobacter heparinus DSM 2366] Length = 116 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|224371980|ref|YP_002606146.1| PflC2 [Desulfobacterium autotrophicum HRM2] gi|223694699|gb|ACN17982.1| PflC2 [Desulfobacterium autotrophicum HRM2] Length = 302 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++CI C +CV CP EN +A +CI+CG C CP +A++ Sbjct: 55 QSCIGCG--ECVAACPEQALELNENGVARDLVKCINCGHCAEICPANAME 102 >gi|218886706|ref|YP_002436027.1| dimethylsulfoxide reductase, chain B [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757660|gb|ACL08559.1| dimethylsulfoxide reductase, chain B [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 205 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 +Y ++ +C C+ CV+ CP ++ +N +++ P +C+ C C CP A Sbjct: 59 FSYYLSVSCNHCEDPICVQSCPTTAMHQDKNGIVSVDPKKCVGCKYCSWGCPYGA 113 >gi|212711766|ref|ZP_03319894.1| hypothetical protein PROVALCAL_02841 [Providencia alcalifaciens DSM 30120] gi|212685288|gb|EEB44816.1| hypothetical protein PROVALCAL_02841 [Providencia alcalifaciens DSM 30120] Length = 200 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 >gi|212634955|ref|YP_002311480.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212556439|gb|ACJ28893.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 181 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ +C+ C++ C+ VCP ++ + + + ++C CG+C CP A+ + G Sbjct: 57 LSHSCMHCENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYSAVSIREDDG 115 >gi|217967483|ref|YP_002352989.1| electron transport complex, RnfABCDGE type, B subunit [Dictyoglomus turgidum DSM 6724] gi|217336582|gb|ACK42375.1| electron transport complex, RnfABCDGE type, B subunit [Dictyoglomus turgidum DSM 6724] Length = 266 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 16 DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DCV+ CP D + GE+ L I ++C CG+C CP Sbjct: 147 DCVKACPFDAIHMGEDGLPKIDMEKCTGCGLCVKACP 183 >gi|186920127|ref|YP_001874781.1| NADH dehydrogenase subunit 8 [Hemiselmis andersenii] gi|186461073|gb|ACC78235.1| NADH dehydrogenase subunit 8 [Hemiselmis andersenii] Length = 163 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP Y+G I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIEAEPRYDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 118 >gi|119384970|ref|YP_916026.1| NADH dehydrogenase subunit I [Paracoccus denitrificans PD1222] gi|156633536|sp|A1B486|NUOI_PARDP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit 9; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NADH-quinone oxidoreductase subunit 9; Short=NQO9; AltName: Full=NDH-1 subunit 9; AltName: Full=NDH-1 subunit I gi|119374737|gb|ABL70330.1| NADH dehydrogenase subunit I [Paracoccus denitrificans PD1222] Length = 163 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 40 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 85 >gi|332800413|ref|YP_004461912.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] gi|332698148|gb|AEE92605.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] Length = 625 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDT-EP 61 LAI PD+C CG C CP AI+ T EP Sbjct: 570 LAIDPDKCRGCGKCRKICPASAIEGKTREP 599 >gi|241765323|ref|ZP_04763300.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] gi|241364961|gb|EER59886.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] Length = 584 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C LC CV CP + L C+ CG+C CP +AI Sbjct: 453 DRCTLC--LSCVSACPASALQDNPQLPQLRFIEQNCVQCGLCVTTCPENAI 501 >gi|237746743|ref|ZP_04577223.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes HOxBLS] gi|229378094|gb|EEO28185.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes HOxBLS] Length = 162 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 34/89 (38%), Gaps = 24/89 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGEN--------FLAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP GE I +CI CG+CE CPVDAI Sbjct: 61 ERCIGCKL--CEAVCPAKAILIETGEREDGSRRTTRYEIDQSKCIFCGLCEEACPVDAIV 118 Query: 56 -----------KPDTEPGLELWLKINSEY 73 K D G E+ L + Y Sbjct: 119 EIPMFEYSADEKGDLVFGKEVLLSVGKTY 147 >gi|163741480|ref|ZP_02148871.1| NADH dehydrogenase subunit I [Phaeobacter gallaeciensis 2.10] gi|161385214|gb|EDQ09592.1| NADH dehydrogenase subunit I [Phaeobacter gallaeciensis 2.10] Length = 164 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|154151379|ref|YP_001404997.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999931|gb|ABS56354.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 428 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 21/77 (27%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-------HP-----------DECIDCG 44 Y+ C C DC+EVCPV+ + + + + HP + CI+CG Sbjct: 93 YIDMVACTGCG--DCIEVCPVEVYNRFDAGVGVRKAIYKPHPQVVPDRVVKDNEHCIECG 150 Query: 45 VCEPEC-PVDAIKPDTE 60 +C C P ++ DTE Sbjct: 151 LCYDSCGPQAILREDTE 167 >gi|145616212|ref|XP_360940.2| hypothetical protein MGG_03483 [Magnaporthe oryzae 70-15] gi|145009964|gb|EDJ94620.1| hypothetical protein MGG_03483 [Magnaporthe oryzae 70-15] Length = 229 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 27/105 (25%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E + I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAVCPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 N+EYAT+ T++E L + K+ K+E Sbjct: 186 ESP----------NAEYATE-----TREELLYNKEKLLSNGDKWE 215 >gi|126465802|ref|YP_001040911.1| ATPase RIL [Staphylothermus marinus F1] gi|126014625|gb|ABN70003.1| ABC transporter related [Staphylothermus marinus F1] Length = 601 Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 8/48 (16%) Query: 16 DCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAI 55 +C+ CPV+ + I+ D CI CG+C +CP +AI Sbjct: 20 ECIRFCPVNKTKRKKAIELSPDGKHAVIYEDICIGCGICVKKCPFNAI 67 >gi|87118384|ref|ZP_01074283.1| electron transport complex protein RnfB [Marinomonas sp. MED121] gi|86166018|gb|EAQ67284.1| electron transport complex protein RnfB [Marinomonas sp. MED121] Length = 198 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 106 VAVIREDECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVEPCPVDCI 159 >gi|146278034|ref|YP_001168193.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17025] gi|145556275|gb|ABP70888.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17025] Length = 167 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 44 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 89 >gi|319940638|ref|ZP_08014981.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] gi|319806004|gb|EFW02762.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] Length = 230 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVD-CFYEGE-NFLAIHPDECIDCGVCEPECPVDA--IKPD 58 + + +C C + CV+VCP C ++ E N + ++ D C+ C C CP +A I P+ Sbjct: 93 HYIRVSCQQCVDSPCVKVCPTGACHHDPETNIVTMNTDRCVGCKYCIAACPYNARWINPE 152 Query: 59 TE 60 T+ Sbjct: 153 TK 154 >gi|293416140|ref|ZP_06658780.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] gi|291432329|gb|EFF05311.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] Length = 644 Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + CV CPV+ + + + +CI C C +CP ++ Sbjct: 61 CHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIDCPFGVVE 108 >gi|161505257|ref|YP_001572369.1| hypothetical protein SARI_03397 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866604|gb|ABX23227.1| hypothetical protein SARI_03397 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 223 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +C C H CV+VCP + + ++PD C+ C C CP Sbjct: 90 HSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACP 136 >gi|52426419|ref|YP_089556.1| hydrogenase 2 protein HybA [Mannheimia succiniciproducens MBEL55E] gi|52308471|gb|AAU38971.1| HybA protein [Mannheimia succiniciproducens MBEL55E] Length = 330 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVQALTKNPKTGIVGYDPDICTGCRYCMVACPFDVPKYD 163 >gi|78224609|ref|YP_386356.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Geobacter metallireducens GS-15] gi|78195864|gb|ABB33631.1| Pyruvate:ferredoxin (flavodoxin) oxidoreductase [Geobacter metallireducens GS-15] Length = 1195 Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 23 VDCF---YEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK--INSEYATQ 76 VDC ++G+ + + P++C CG C CP + + + + + + ++ Sbjct: 731 VDCKVPEFKGQKLTVQVAPEDCTGCGACVHNCPAKSKEDPNHKAINMAFQAPLRAQEVAN 790 Query: 77 WPNITTKKESLPSAAKMDGVK 97 W T + P+ AK+D V+ Sbjct: 791 WDFFLTIPDVDPTVAKLDTVR 811 >gi|325959023|ref|YP_004290489.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330455|gb|ADZ09517.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 342 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 9 CILCKHTDCVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPV 52 CI CK C++ C V D +E +N + I +CI CG C CPV Sbjct: 132 CIRCKK--CMKTCKVGDAIFEEDNKIVIDQSKCISCGECLKTCPV 174 >gi|325277470|ref|ZP_08143076.1| NADH dehydrogenase subunit I [Pseudomonas sp. TJI-51] gi|324097399|gb|EGB95639.1| NADH dehydrogenase subunit I [Pseudomonas sp. TJI-51] Length = 141 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 19 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 76 Query: 57 --PDTE 60 PD E Sbjct: 77 LTPDFE 82 >gi|303239438|ref|ZP_07325965.1| nitrite and sulphite reductase 4Fe-4S region [Acetivibrio cellulolyticus CD2] gi|302593001|gb|EFL62722.1| nitrite and sulphite reductase 4Fe-4S region [Acetivibrio cellulolyticus CD2] Length = 317 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C CK + CP++ + L I+ + C +CG C+ +C DAI+ D++ G +++ Sbjct: 172 DSCNGCKKCSIEDTCPMNAAKVVDGILEINKEICNNCGRCDGKCHFDAIE-DSKVGYKIY 230 Query: 67 L 67 + Sbjct: 231 I 231 >gi|304311502|ref|YP_003811100.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] gi|301797235|emb|CBL45455.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] Length = 185 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CP C +G F I+ CI CG+CE CP AI+ Sbjct: 63 ERCVACNL--CAAACPAQCISLQKAERDDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 120 Query: 57 --PDTE 60 PD E Sbjct: 121 LTPDFE 126 >gi|261403601|ref|YP_003247825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370594|gb|ACX73343.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 391 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 14/60 (23%) Query: 8 NCILCKHTDCVEVCPVDCF------------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C+LC+ C++VCP++ + + D+C+ CGVC PECPV AI Sbjct: 97 HCVLCQK--CIDVCPIEIISIPGVIDKPKKEVKAPKEPIVVTDDCVGCGVCVPECPVGAI 154 >gi|239502912|ref|ZP_04662222.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii AB900] gi|260554429|ref|ZP_05826650.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|260410971|gb|EEX04268.1| ferredoxin [Acinetobacter baumannii ATCC 19606] Length = 87 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCDM--CLPECPNTAIFEGSKVYEIDPLRCTECVGFYAAPTCKEVCPIDC 58 Query: 55 IKPD 58 IK D Sbjct: 59 IKQD 62 >gi|238751995|ref|ZP_04613480.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] gi|238709829|gb|EEQ02062.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] Length = 205 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 +Y ++ C C CV CP ++ E + ++ D C+ C CE CP A + D Sbjct: 58 FSYYLSIACNHCSSPTCVTGCPTGAMHKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFD 117 Query: 59 TEPGL 63 L Sbjct: 118 ARKKL 122 >gi|113867168|ref|YP_725657.1| ferredoxin [Ralstonia eutropha H16] gi|113525944|emb|CAJ92289.1| Predicted NADH:ubiquinone oxidoreductase,subunit RnfB [Ralstonia eutropha H16] Length = 269 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + PD C C +C CPVD I Sbjct: 88 CIGC--TLCIQACPVDAIAGAAKQMHTVIPDWCTGCDLCVAPCPVDCI 133 >gi|88602962|ref|YP_503140.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88188424|gb|ABD41421.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 113 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 19/37 (51%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CP+D E + + D CI CGVC CP AI Sbjct: 37 ERCPMDAIVEEDGEFQVLNDRCIGCGVCIITCPSKAI 73 >gi|88811011|ref|ZP_01126267.1| electron transport complex protein RnfB [Nitrococcus mobilis Nb-231] gi|88791550|gb|EAR22661.1| electron transport complex protein RnfB [Nitrococcus mobilis Nb-231] Length = 277 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 110 VAWIDETACIGC--TRCIQACPVDAILGTAKQMHTVIRTECTGCALCIAPCPVDCI 163 >gi|312885487|ref|ZP_07745126.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] gi|311302067|gb|EFQ79097.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mucilaginibacter paludis DSM 18603] Length = 117 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|305663975|ref|YP_003860263.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ignisphaera aggregans DSM 17230] gi|304378544|gb|ADM28383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ignisphaera aggregans DSM 17230] Length = 75 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV E CI C C VCP F + + I+ D+C+ C C CP +AI+ Sbjct: 5 VYVDQEKCIGCAQ--CYAVCPNKVFVIRDKKSIPINADKCVGCRACIVRCPTNAIR 58 >gi|237653652|ref|YP_002889966.1| electron transport complex, RnfABCDGE type subunit beta [Thauera sp. MZ1T] gi|237624899|gb|ACR01589.1| electron transport complex, RnfABCDGE type, B subunit [Thauera sp. MZ1T] Length = 179 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDT 59 + V T+ CI C C++ CP D L + +E CI CG C CP I + Sbjct: 104 LARVRTDACIGCSR--CIKSCPTDAILGATKQLHVVLEEACIGCGACAEVCPTGGIDLEG 161 Query: 60 EP 61 P Sbjct: 162 IP 163 >gi|226327835|ref|ZP_03803353.1| hypothetical protein PROPEN_01712 [Proteus penneri ATCC 35198] gi|225203539|gb|EEG85893.1| hypothetical protein PROPEN_01712 [Proteus penneri ATCC 35198] Length = 206 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV CP ++ E + ++ D C+ C CE CP A + D Sbjct: 60 SYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDICVGCRYCELRCPYGAPQFDE 119 Query: 60 EPGL 63 + L Sbjct: 120 KKKL 123 >gi|254458384|ref|ZP_05071809.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207084692|gb|EDZ61979.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 565 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECP 51 NC LC CV C VD +N L I+P C CG CE CP Sbjct: 428 NCTLC--LACVGACNVDALVANIDDNSLRINPSICTACGFCEVVCP 471 >gi|330999801|ref|ZP_08323506.1| Tat pathway signal sequence domain protein [Parasutterella excrementihominis YIT 11859] gi|329573804|gb|EGG55393.1| Tat pathway signal sequence domain protein [Parasutterella excrementihominis YIT 11859] Length = 231 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C++ CV+ CPV Y+ + + I D+CI C C C A KPD Sbjct: 88 CNHCENPTCVKACPVKATYKRPEDGIVVIDYDKCIHCMNCTKACAYGARKPD 139 >gi|325830836|ref|ZP_08164220.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325487243|gb|EGC89686.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 214 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+T+ C C C + CP C EG + AI + C+ CG+C C AI Sbjct: 161 FVITDRCQECGA--CADACPEACIEEGPPY-AIVQEHCLRCGLCRETCSFGAI 210 >gi|325955102|ref|YP_004238762.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Weeksella virosa DSM 16922] gi|323437720|gb|ADX68184.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Weeksella virosa DSM 16922] Length = 116 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 15/21 (71%), Positives = 17/21 (80%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI+CG CEPECP +AI Sbjct: 4 IITDECINCGACEPECPNNAI 24 >gi|319760609|ref|YP_004124547.1| NADH-quinone oxidoreductase subunit I [Candidatus Blochmannia vafer str. BVAF] gi|318039323|gb|ADV33873.1| NADH-quinone oxidoreductase subunit I [Candidatus Blochmannia vafer str. BVAF] Length = 181 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVSCPVGCISLKKSETIDGRWYPDFFRINFSRCIFCGMCEEACPTAAIQ 116 >gi|313205655|ref|YP_004044832.1| ferredoxin [Riemerella anatipestifer DSM 15868] gi|312444971|gb|ADQ81326.1| ferredoxin [Riemerella anatipestifer DSM 15868] gi|315022613|gb|EFT35639.1| Ferredoxin [Riemerella anatipestifer RA-YM] gi|325336903|gb|ADZ13177.1| ferredoxin [Riemerella anatipestifer RA-GD] Length = 116 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 15/21 (71%), Positives = 17/21 (80%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI+CG CEPECP +AI Sbjct: 4 IITDECINCGACEPECPNNAI 24 >gi|291287814|ref|YP_003504630.1| electron transport complex, RnfABCDGE type, B subunit [Denitrovibrio acetiphilus DSM 12809] gi|290884974|gb|ADD68674.1| electron transport complex, RnfABCDGE type, B subunit [Denitrovibrio acetiphilus DSM 12809] Length = 267 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 16 DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK--PDTEP 61 CV+ C D Y G + + I PD+C CG C CP IK P+ +P Sbjct: 143 SCVKSCAFDAMYMGSDGIPVIIPDKCTSCGKCVAACPRKLIKLIPEDKP 191 >gi|227112320|ref|ZP_03825976.1| NADH dehydrogenase subunit I [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326159|ref|ZP_03830183.1| NADH dehydrogenase subunit I [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|261820799|ref|YP_003258905.1| NADH dehydrogenase subunit I [Pectobacterium wasabiae WPP163] gi|261604812|gb|ACX87298.1| NADH-quinone oxidoreductase, chain I [Pectobacterium wasabiae WPP163] Length = 180 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRVNFSRCIFCGFCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|300778457|ref|ZP_07088315.1| ferredoxin 2 with 4Fe-4S binding domain protein [Chryseobacterium gleum ATCC 35910] gi|300503967|gb|EFK35107.1| ferredoxin 2 with 4Fe-4S binding domain protein [Chryseobacterium gleum ATCC 35910] Length = 116 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|237731324|ref|ZP_04561805.1| tetrathionate reductase subunit B [Citrobacter sp. 30_2] gi|226906863|gb|EEH92781.1| tetrathionate reductase subunit B [Citrobacter sp. 30_2] Length = 249 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 104 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNTRCVGCAYCVQACPYDA 151 >gi|224825660|ref|ZP_03698764.1| electron transport complex, RnfABCDGE type, B subunit [Lutiella nitroferrum 2002] gi|224601884|gb|EEG08063.1| electron transport complex, RnfABCDGE type, B subunit [Lutiella nitroferrum 2002] Length = 232 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + + ++CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 78 LAVIQEDSCIGC--TLCIQACPVDAIVGAAKLMHTVIAAECTGCELCVAPCPVDCI 131 >gi|213022400|ref|ZP_03336847.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 217 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|148642366|ref|YP_001272879.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] gi|261351019|ref|ZP_05976436.1| putative 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2374] gi|148551383|gb|ABQ86511.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] gi|288860359|gb|EFC92657.1| putative 4Fe-4S binding domain protein [Methanobrevibacter smithii DSM 2374] Length = 274 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 F+ + +AI P CI C +C +CPVDAI+P Sbjct: 37 FFSQKEIIAIAP-RCIRCNMCVDQCPVDAIEP 67 >gi|78188921|ref|YP_379259.1| polysulfide reductase, subunit B, putative [Chlorobium chlorochromatii CaD3] gi|78171120|gb|ABB28216.1| polysulfide reductase, subunit B, putative [Chlorobium chlorochromatii CaD3] Length = 199 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI----KPDTEPGL 63 C+ C++T C+ CP ++ ++ + ++ D CI C C CP DA D E Sbjct: 60 CMHCENTPCMSACPTGATWKNKDGVILVNYDRCIGCYACCIACPYDARYAYNNHDVEEAE 119 Query: 64 ELWLKINSE 72 +L+ K++S Sbjct: 120 KLYGKLSSH 128 >gi|15669493|ref|NP_248303.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|48474332|sp|Q58699|Y1303_METJA RecName: Full=Uncharacterized polyferredoxin-like protein MJ1303 gi|1591942|gb|AAB99312.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 501 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE---------CIDCGVCEPECPVDAIK 56 CILC CVE+CP D + ENF I E CI+CG+C CP A++ Sbjct: 229 CILC--LKCVEICPNDAL-KVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALR 282 >gi|89896185|ref|YP_519672.1| hypothetical protein DSY3439 [Desulfitobacterium hafniense Y51] gi|219668025|ref|YP_002458460.1| cobyrinic acid ac-diamide synthase [Desulfitobacterium hafniense DCB-2] gi|89335633|dbj|BAE85228.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538285|gb|ACL20024.1| Cobyrinic acid ac-diamide synthase [Desulfitobacterium hafniense DCB-2] Length = 287 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 11 LCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 LC D C + C + G + + P C CGVC+ CP AI EL L I Sbjct: 68 LCSQCDQCRQNCRFEAISAGSTY-RVDPFACEGCGVCQALCPAGAITLKPAAAGELMLYI 126 Query: 70 NSE 72 + E Sbjct: 127 HQE 129 >gi|307719316|ref|YP_003874848.1| transcriptional regulator containing a ferredoxin domain [Spirochaeta thermophila DSM 6192] gi|306533041|gb|ADN02575.1| putative transcriptional regulator containing a ferredoxin domain [Spirochaeta thermophila DSM 6192] Length = 706 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPEC 50 C+ C C+ VCPV +G + + P+ CI CG C C Sbjct: 15 CVSCHR--CIAVCPVKYANDGSGEVVEVRPELCIGCGECLKAC 55 >gi|300937183|ref|ZP_07152035.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300457737|gb|EFK21230.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 157 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|294341669|emb|CAZ90088.1| putative 4Fe-4S ferredoxin [Thiomonas sp. 3As] Length = 736 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 11/62 (17%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH----PDECIDCGVCEPECPVDAIKPDTEPGLE 64 C LC CV CP +N LA C+ CG+C CP DAI+ EP L Sbjct: 607 CTLC--LSCVGACPAGAL--ADNPLAPQLRFIEKNCVQCGLCVKTCPEDAIR--LEPRL- 659 Query: 65 LW 66 LW Sbjct: 660 LW 661 >gi|269122058|ref|YP_003310235.1| hydrogenase large subunit domain protein [Sebaldella termitidis ATCC 33386] gi|268615936|gb|ACZ10304.1| hydrogenase large subunit domain protein [Sebaldella termitidis ATCC 33386] Length = 488 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C + CPVD EN +AI +CI+CG+C CP AI Sbjct: 157 CKKSCPVDAIEIDENDIAIIDSTKCINCGLCINNCPFGAI 196 >gi|254173765|ref|ZP_04880437.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermococcus sp. AM4] gi|214032457|gb|EEB73287.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermococcus sp. AM4] Length = 635 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 24/53 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ + C CK + CP + N + I C CGVC CP DAIK Sbjct: 574 VIEDRCTGCKACILLTGCPALVYDPETNKVRIDGLLCTGCGVCNQTCPFDAIK 626 >gi|170691508|ref|ZP_02882673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|170143713|gb|EDT11876.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] Length = 85 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|170680702|ref|YP_001744275.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] gi|170518420|gb|ACB16598.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] Length = 205 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|189424213|ref|YP_001951390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189420472|gb|ACD94870.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 256 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 8/80 (10%) Query: 10 ILCKHTD---CVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGL 63 +LC H CV+ CPV ++ + + +H DE CI C C+ CP A+ E Sbjct: 62 VLCNHCSDAPCVKACPVKPKAMFKTPDGITMHNDERCIGCRRCQKACPYSAMDVAKEKAE 121 Query: 64 ELWLKINSEYATQWPNITTK 83 + NS T+ P+ ++ Sbjct: 122 YSVISANS--GTEAPHKASR 139 >gi|110680455|ref|YP_683462.1| NADH dehydrogenase subunit I [Roseobacter denitrificans OCh 114] gi|115502543|sp|Q163R7|NUOI_ROSDO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|109456571|gb|ABG32776.1| NADH-quinone oxidoreductase chain I [Roseobacter denitrificans OCh 114] Length = 164 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|114319976|ref|YP_741659.1| electron transport complex, RnfABCDGE type, B subunit [Alkalilimnicola ehrlichii MLHE-1] gi|123127335|sp|Q0AAG8|RNFB_ALHEH RecName: Full=Electron transport complex protein rnfB gi|114226370|gb|ABI56169.1| electron transport complex, RnfABCDGE type, B subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 186 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + +V CI C T C++ CPVD + + EC CG+C CPVD I Sbjct: 106 VAWVDEAVCIGC--TRCIQACPVDAILGAAKQMHTVLKGECTGCGLCVDPCPVDCI 159 >gi|325299224|ref|YP_004259141.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324318777|gb|ADY36668.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] Length = 260 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDA 54 V TENC C +CVEVCP EN + + CI C C CP A Sbjct: 186 VCTENCFGCG--ECVEVCPTHAIRLNAENVIETDINRCIRCCACVKACPNGA 235 >gi|315299687|gb|EFU58929.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] Length = 459 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 327 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACP 372 >gi|304314163|ref|YP_003849310.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] gi|302587622|gb|ADL57997.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] Length = 366 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV C C +CV CPVD + + I D CI C C CP D E + Sbjct: 189 VVRGECTECG--ECVSECPVDAMTLHDGVM-IEYDRCIACMNCLDTCPRGVFDLDWERDI 245 Query: 64 ELWLKINSEYA 74 +++ EYA Sbjct: 246 PEFIERMMEYA 256 >gi|291522103|emb|CBK80396.1| electron transport complex, RnfABCDGE type, B subunit [Coprococcus catus GD/7] Length = 256 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 19/42 (45%) Query: 14 HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 H DC VCP + I D+C+ CG+C CP I Sbjct: 140 HGDCAAVCPEKAIIVHDGLAMIDQDKCVGCGICVKTCPKHVI 181 >gi|253689141|ref|YP_003018331.1| NADH-quinone oxidoreductase, chain I [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755719|gb|ACT13795.1| NADH-quinone oxidoreductase, chain I [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 180 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGE---NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRVNFSRCIFCGFCEEACPTTAIQ 115 Query: 57 --PDTEPG 62 PD E G Sbjct: 116 LTPDFEMG 123 >gi|269122188|ref|YP_003310365.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] gi|268616066|gb|ACZ10434.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] Length = 614 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + YV+ CI C T C +CP C + I ++CI CG C C AI D Sbjct: 558 IKYVINNKCIGC--TLCARICPESCITGSPKQRHYIDAEKCIKCGSCYEACKFHAINRD 614 >gi|163738809|ref|ZP_02146223.1| NADH-quinone oxidoreductase, chain I [Phaeobacter gallaeciensis BS107] gi|161388137|gb|EDQ12492.1| NADH-quinone oxidoreductase, chain I [Phaeobacter gallaeciensis BS107] Length = 164 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|159905592|ref|YP_001549254.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887085|gb|ABX02022.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 161 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI+C C+EVCPV + D+C+ C C CPVDAIK Sbjct: 36 ELCIMCDR--CLEVCPVTAISSNFPEVPHIDDKCVYCNTCVETCPVDAIK 83 >gi|126464923|ref|YP_001040032.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Staphylothermus marinus F1] gi|126013746|gb|ABN69124.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Staphylothermus marinus F1] Length = 161 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 17 CVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 C VCP + + + ++PD+CI CGVC P+CP A+ Sbjct: 45 CANVCPFNAIEMEKIYDLPRVNPDKCIGCGVCVPQCPGLAM 85 >gi|219850233|ref|YP_002464666.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus aggregans DSM 9485] gi|219544492|gb|ACL26230.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus aggregans DSM 9485] Length = 1029 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECP 51 Y++ NC+ C+ C VCPV YEG N + + C+ C CP Sbjct: 844 YMMPVNCMQCEKAPCEVVCPVAATVHDYEGLNNMVY--NRCVGTKYCSNNCP 893 >gi|322832179|ref|YP_004212206.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] gi|321167380|gb|ADW73079.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] Length = 205 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C C +VCP ++ E+ F+ ++ D CI C C CP A Sbjct: 59 FAYYLSISCNHCADPACTKVCPSGAMHKREDGFVVVNEDICIGCRYCHMACPYGA 113 >gi|213420835|ref|ZP_03353901.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 169 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|154173868|ref|YP_001408698.1| sulfur reductase FeS subunit [Campylobacter curvus 525.92] gi|112802398|gb|EAT99742.1| sulfur reductase FeS subunit [Campylobacter curvus 525.92] Length = 188 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDT 59 + ++C++C+ + CV+VCP F E + C+ C C CP DA ++P T Sbjct: 54 IRQSCVMCEDSPCVDVCPTGASFKTKEGVTLLDHRICVSCKYCILACPYDARFVEPKT 111 >gi|145756|gb|AAA83844.1| anaerobic dimethyl sulfoxide reductase [Escherichia coli] Length = 207 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|15800758|ref|NP_286772.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 EDL933] gi|15830234|ref|NP_309007.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. Sakai] gi|168752123|ref|ZP_02777145.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|168756986|ref|ZP_02781993.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|168762971|ref|ZP_02787978.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|168769888|ref|ZP_02794895.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|168776254|ref|ZP_02801261.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|168783805|ref|ZP_02808812.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|168787323|ref|ZP_02812330.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|168801423|ref|ZP_02826430.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|195939558|ref|ZP_03084940.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. EC4024] gi|208808514|ref|ZP_03250851.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208815388|ref|ZP_03256567.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208822781|ref|ZP_03263100.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209399354|ref|YP_002269568.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|217325565|ref|ZP_03441649.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|254792095|ref|YP_003076932.1| dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|261227400|ref|ZP_05941681.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. FRIK2000] gi|261256177|ref|ZP_05948710.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. FRIK966] gi|12514060|gb|AAG55382.1|AE005279_2 anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. EDL933] gi|13360439|dbj|BAB34403.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. Sakai] gi|187768357|gb|EDU32201.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|188013963|gb|EDU52085.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|188998922|gb|EDU67908.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|189355906|gb|EDU74325.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|189361185|gb|EDU79604.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|189366789|gb|EDU85205.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|189372640|gb|EDU91056.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|189376436|gb|EDU94852.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|208728315|gb|EDZ77916.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208732036|gb|EDZ80724.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208738266|gb|EDZ85949.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209160754|gb|ACI38187.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209774998|gb|ACI85811.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775000|gb|ACI85812.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775002|gb|ACI85813.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775006|gb|ACI85815.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|217321786|gb|EEC30210.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|254591495|gb|ACT70856.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. TW14359] gi|320192618|gb|EFW67259.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320637765|gb|EFX07557.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. G5101] gi|320642889|gb|EFX12090.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H- str. 493-89] gi|320648346|gb|EFX17001.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H- str. H 2687] gi|320664277|gb|EFX31428.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. LSU-61] gi|326338209|gb|EGD62038.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|326346186|gb|EGD69924.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] Length = 205 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|83942660|ref|ZP_00955121.1| NADH dehydrogenase subunit I [Sulfitobacter sp. EE-36] gi|83846753|gb|EAP84629.1| NADH dehydrogenase subunit I [Sulfitobacter sp. EE-36] Length = 164 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P+ CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|99080595|ref|YP_612749.1| NADH dehydrogenase subunit I [Ruegeria sp. TM1040] gi|115502544|sp|Q1GIM9|NUOI_SILST RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|99036875|gb|ABF63487.1| NADH-quinone oxidoreductase chain I [Ruegeria sp. TM1040] Length = 164 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|16128862|ref|NP_415415.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. MG1655] gi|30062382|ref|NP_836553.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 2457T] gi|74311453|ref|YP_309872.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella sonnei Ss046] gi|89107745|ref|AP_001525.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. W3110] gi|91209998|ref|YP_539984.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli UTI89] gi|110804895|ref|YP_688415.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 5 str. 8401] gi|117623079|ref|YP_851992.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli APEC O1] gi|157158279|ref|YP_001462093.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|157160418|ref|YP_001457736.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|170020703|ref|YP_001725657.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|170080553|ref|YP_001729873.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. DH10B] gi|170769322|ref|ZP_02903775.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|187732026|ref|YP_001880908.1| dimethylsulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|188494050|ref|ZP_03001320.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|191167581|ref|ZP_03029392.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|193064681|ref|ZP_03045760.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|193070738|ref|ZP_03051673.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194428398|ref|ZP_03060939.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194435161|ref|ZP_03067394.1| dimethylsulfoxide reductase, B subunit [Shigella dysenteriae 1012] gi|194438684|ref|ZP_03070771.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|209918144|ref|YP_002292228.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE11] gi|218553481|ref|YP_002386394.1| dimethyl sulfoxide reductase, anaerobic subunit B [Escherichia coli IAI1] gi|218557803|ref|YP_002390716.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli S88] gi|218688738|ref|YP_002396950.1| dimethyl sulfoxide reductase, anaerobic subunit B [Escherichia coli ED1a] gi|218694368|ref|YP_002402035.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli 55989] gi|218704324|ref|YP_002411843.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli UMN026] gi|237707115|ref|ZP_04537596.1| dimethylsulfoxide reductase [Escherichia sp. 3_2_53FAA] gi|238900153|ref|YP_002925949.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BW2952] gi|253774076|ref|YP_003036907.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161009|ref|YP_003044117.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli B str. REL606] gi|256020977|ref|ZP_05434842.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Shigella sp. D9] gi|256023404|ref|ZP_05437269.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia sp. 4_1_40B] gi|260843145|ref|YP_003220923.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O103:H2 str. 12009] gi|260854186|ref|YP_003228077.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O26:H11 str. 11368] gi|260867067|ref|YP_003233469.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O111:H- str. 11128] gi|291281898|ref|YP_003498716.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. CB9615] gi|293409273|ref|ZP_06652849.1| conserved hypothetical protein [Escherichia coli B354] gi|293414177|ref|ZP_06656826.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|293433192|ref|ZP_06661620.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli B088] gi|298379983|ref|ZP_06989588.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli FVEC1302] gi|300817003|ref|ZP_07097222.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 107-1] gi|300823634|ref|ZP_07103761.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 119-7] gi|300901678|ref|ZP_07119736.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 198-1] gi|300902948|ref|ZP_07120892.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 84-1] gi|300921071|ref|ZP_07137455.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 115-1] gi|300926533|ref|ZP_07142322.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 182-1] gi|300929588|ref|ZP_07145051.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 187-1] gi|300937611|ref|ZP_07152420.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 21-1] gi|300949745|ref|ZP_07163722.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 116-1] gi|300954718|ref|ZP_07167153.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 175-1] gi|301022880|ref|ZP_07186713.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 69-1] gi|301024414|ref|ZP_07188099.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|301302498|ref|ZP_07208629.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 124-1] gi|301325782|ref|ZP_07219230.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 78-1] gi|301646340|ref|ZP_07246228.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|306812649|ref|ZP_07446842.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli NC101] gi|307137523|ref|ZP_07496879.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli H736] gi|307311718|ref|ZP_07591358.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|309795296|ref|ZP_07689714.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 145-7] gi|312971022|ref|ZP_07785201.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|331641416|ref|ZP_08342551.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331662310|ref|ZP_08363233.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331667269|ref|ZP_08368134.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331672436|ref|ZP_08373226.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA280] gi|331676681|ref|ZP_08377377.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331682404|ref|ZP_08383023.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332282202|ref|ZP_08394615.1| dimethyl sulfoxide reductase [Shigella sp. D9] gi|2506394|sp|P18776|DMSB_ECOLI RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|1651422|dbj|BAA35627.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K12 substr. W3110] gi|1787122|gb|AAC73981.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. MG1655] gi|30040628|gb|AAP16359.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 2457T] gi|73854930|gb|AAZ87637.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella sonnei Ss046] gi|91071572|gb|ABE06453.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli UTI89] gi|110614443|gb|ABF03110.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 5 str. 8401] gi|115512203|gb|ABJ00278.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli APEC O1] gi|157066098|gb|ABV05353.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|157080309|gb|ABV20017.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|169755631|gb|ACA78330.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|169888388|gb|ACB02095.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. DH10B] gi|170121974|gb|EDS90905.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|187429018|gb|ACD08292.1| dimethylsulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|188489249|gb|EDU64352.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|190902342|gb|EDV62080.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|192927738|gb|EDV82353.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|192955931|gb|EDV86399.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194413613|gb|EDX29894.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194416599|gb|EDX32735.1| dimethylsulfoxide reductase, B subunit [Shigella dysenteriae 1012] gi|194422316|gb|EDX38316.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|209775004|gb|ACI85814.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209911403|dbj|BAG76477.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE11] gi|218351100|emb|CAU96804.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli 55989] gi|218360249|emb|CAQ97799.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli IAI1] gi|218364572|emb|CAR02258.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli S88] gi|218426302|emb|CAR07127.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli ED1a] gi|218431421|emb|CAR12299.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli UMN026] gi|222032629|emb|CAP75368.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli LF82] gi|226898325|gb|EEH84584.1| dimethylsulfoxide reductase [Escherichia sp. 3_2_53FAA] gi|238860773|gb|ACR62771.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BW2952] gi|242376710|emb|CAQ31423.1| dimethyl sulfoxide reductase, chain B, subunit of dimethyl sulfoxide reductase [Escherichia coli BL21(DE3)] gi|253325120|gb|ACT29722.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972910|gb|ACT38581.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli B str. REL606] gi|253977124|gb|ACT42794.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BL21(DE3)] gi|257752835|dbj|BAI24337.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O26:H11 str. 11368] gi|257758292|dbj|BAI29789.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O103:H2 str. 12009] gi|257763423|dbj|BAI34918.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O111:H- str. 11128] gi|260449959|gb|ACX40381.1| dimethylsulfoxide reductase, chain B [Escherichia coli DH1] gi|281178029|dbj|BAI54359.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE15] gi|281600223|gb|ADA73207.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri 2002017] gi|290761771|gb|ADD55732.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. CB9615] gi|291324011|gb|EFE63433.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli B088] gi|291434235|gb|EFF07208.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|291469741|gb|EFF12225.1| conserved hypothetical protein [Escherichia coli B354] gi|294491373|gb|ADE90129.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli IHE3034] gi|298279681|gb|EFI21189.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli FVEC1302] gi|299880386|gb|EFI88597.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|300318329|gb|EFJ68113.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 175-1] gi|300354902|gb|EFJ70772.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 198-1] gi|300397342|gb|EFJ80880.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 69-1] gi|300405009|gb|EFJ88547.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 84-1] gi|300411922|gb|EFJ95232.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 115-1] gi|300417450|gb|EFK00761.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 182-1] gi|300450859|gb|EFK14479.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 116-1] gi|300457341|gb|EFK20834.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 21-1] gi|300462476|gb|EFK25969.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 187-1] gi|300523834|gb|EFK44903.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 119-7] gi|300530355|gb|EFK51417.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 107-1] gi|300842337|gb|EFK70097.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 124-1] gi|300847425|gb|EFK75185.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 78-1] gi|301075443|gb|EFK90249.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|305853412|gb|EFM53851.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli NC101] gi|306908273|gb|EFN38772.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|307627675|gb|ADN71979.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli UM146] gi|308120946|gb|EFO58208.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 145-7] gi|309701171|emb|CBJ00471.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli ETEC H10407] gi|310336783|gb|EFQ01950.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|312945418|gb|ADR26245.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O83:H1 str. NRG 857C] gi|313650193|gb|EFS14605.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2a str. 2457T] gi|315060180|gb|ADT74507.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli W] gi|315135543|dbj|BAJ42702.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli DH1] gi|315257935|gb|EFU37903.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 85-1] gi|315287518|gb|EFU46929.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 110-3] gi|315296137|gb|EFU55446.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 16-3] gi|315619207|gb|EFU99786.1| dimethylsulfoxide reductase, chain B [Escherichia coli 3431] gi|320175336|gb|EFW50442.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella dysenteriae CDC 74-1112] gi|320202290|gb|EFW76861.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli EC4100B] gi|320654184|gb|EFX22252.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659808|gb|EFX27364.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. USDA 5905] gi|323157219|gb|EFZ43342.1| dimethylsulfoxide reductase, chain B [Escherichia coli EPECa14] gi|323159520|gb|EFZ45500.1| dimethylsulfoxide reductase, chain B [Escherichia coli E128010] gi|323165356|gb|EFZ51143.1| dimethylsulfoxide reductase, chain B [Shigella sonnei 53G] gi|323175008|gb|EFZ60623.1| dimethylsulfoxide reductase, chain B [Escherichia coli LT-68] gi|323175483|gb|EFZ61078.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1180] gi|323185399|gb|EFZ70763.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1357] gi|323379263|gb|ADX51531.1| dimethylsulfoxide reductase, chain B [Escherichia coli KO11] gi|323938001|gb|EGB34263.1| dimethylsulfoxide reductase [Escherichia coli E1520] gi|323942811|gb|EGB38976.1| dimethylsulfoxide reductase [Escherichia coli E482] gi|323947316|gb|EGB43324.1| dimethylsulfoxide reductase [Escherichia coli H120] gi|323953395|gb|EGB49261.1| dimethylsulfoxide reductase [Escherichia coli H252] gi|323958202|gb|EGB53911.1| dimethylsulfoxide reductase [Escherichia coli H263] gi|323962943|gb|EGB58516.1| dimethylsulfoxide reductase [Escherichia coli H489] gi|323967142|gb|EGB62566.1| dimethylsulfoxide reductase [Escherichia coli M863] gi|323973232|gb|EGB68424.1| dimethylsulfoxide reductase [Escherichia coli TA007] gi|323976718|gb|EGB71806.1| dimethylsulfoxide reductase [Escherichia coli TW10509] gi|324009810|gb|EGB79029.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 57-2] gi|324019014|gb|EGB88233.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 117-3] gi|324116108|gb|EGC10032.1| dimethylsulfoxide reductase [Escherichia coli E1167] gi|327253683|gb|EGE65312.1| dimethylsulfoxide reductase, chain B [Escherichia coli STEC_7v] gi|331038214|gb|EGI10434.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331060732|gb|EGI32696.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331065625|gb|EGI37518.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331070342|gb|EGI41707.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA280] gi|331075370|gb|EGI46668.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331080035|gb|EGI51214.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332091030|gb|EGI96120.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 155-74] gi|332104554|gb|EGJ07900.1| dimethyl sulfoxide reductase [Shigella sp. D9] gi|332342337|gb|AEE55671.1| dimethylsulfoxide reductase DmsB [Escherichia coli UMNK88] gi|332759810|gb|EGJ90113.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 4343-70] gi|332760458|gb|EGJ90747.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2747-71] gi|332768073|gb|EGJ98259.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2930-71] gi|333006981|gb|EGK26476.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-218] gi|333021020|gb|EGK40278.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-304] Length = 205 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|300712347|ref|YP_003738161.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halalkalicoccus jeotgali B3] gi|299126030|gb|ADJ16369.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halalkalicoccus jeotgali B3] Length = 224 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK-PDTEPGL 63 C C++ CV VCP + + +N F+ + D CI C C CP A + P++ GL Sbjct: 91 QCYHCENAPCVSVCPTNALQKKDNGFVEVVDDLCIGCQYCLSACPFGAPQFPESNEGL 148 >gi|294053884|ref|YP_003547542.1| DMSO reductase anchor subunit (DmsC) [Coraliomargarita akajimensis DSM 45221] gi|293613217|gb|ADE53372.1| DMSO reductase anchor subunit (DmsC) [Coraliomargarita akajimensis DSM 45221] Length = 514 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C+ CPV + + E + D+CI C C +CP D K G Sbjct: 96 VTTACHHCADPGCLNGCPVLAYEKDEETGIVRHLDDQCIGCQYCILKCPYDVPKYSESMG 155 Query: 63 L 63 + Sbjct: 156 I 156 >gi|296137471|ref|YP_003644713.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295797593|gb|ADG32383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 311 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 C C+ C+EVCP ++ ++ + I D C CG C CP DA Sbjct: 149 CNHCERPSCIEVCPAGATWQRKDGIVEIDYDLCWGCGACVNACPYDA 195 >gi|253744913|gb|EET01048.1| RNase L inhibitor [Giardia intestinalis ATCC 50581] Length = 675 Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Query: 16 DCVEVCPVD-----CFY---EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C +CPV+ C EG I CI C +C +CP DAIK Sbjct: 29 ECKLLCPVNKTGKRCVVASSEGNKTAMISEKLCIGCDICVKKCPFDAIK 77 >gi|256810301|ref|YP_003127670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793501|gb|ACV24170.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 405 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIK 56 + YV+ E+ CI C+ C +VC V+ + I P+ C+ CG CE ECPV AI+ Sbjct: 270 ICYVIDEDLCIGCRI--CQKVCHVNAVKISKEIKLPYIVPELCVACGACERECPVGAIR 326 >gi|242910167|ref|YP_002970696.1| photosystem I subunit VII [Alsophila spinulosa] gi|218454836|gb|ACK77173.1| photosystem I subunit VII [Alsophila spinulosa] Length = 81 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 10/77 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF----YEGENFLAIHP----DECIDCGVCEPECPVDAIK 56 + + CI C T CV CP D ++G I P ++C+ C CE CP D + Sbjct: 7 IYDTCIGC--TQCVRACPTDVLEMIPWDGCKANQIAPAPRTEDCVGCKRCESACPTDFLS 64 Query: 57 PDTEPGLELWLKINSEY 73 PG E + Y Sbjct: 65 VRVYPGAETTRSMGLAY 81 >gi|254519300|ref|ZP_05131356.1| polyferredoxin [Clostridium sp. 7_2_43FAA] gi|226913049|gb|EEH98250.1| polyferredoxin [Clostridium sp. 7_2_43FAA] Length = 265 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI CK C CP D + N + D+C++C +C +CP AIK Sbjct: 215 CIGCKL--CERNCPKDAVHVTNNLAKVDYDKCVNCQLCTKKCPTGAIK 260 >gi|224367239|ref|YP_002601402.1| Fdx2 [Desulfobacterium autotrophicum HRM2] gi|223689955|gb|ACN13238.1| Fdx2 [Desulfobacterium autotrophicum HRM2] Length = 71 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 MT + CI C CV+ CP D E E + +P +C C +C CPVDAI+ Sbjct: 1 MTIKSIKGCIGCG--TCVKTCPTDVIRLDPETEKAVIKYPADCQICHLCRMYCPVDAIRI 58 Query: 58 DTEPGL 63 E + Sbjct: 59 SPEKSI 64 >gi|209519639|ref|ZP_03268429.1| ferredoxin [Burkholderia sp. H160] gi|209499925|gb|EDZ99990.1| ferredoxin [Burkholderia sp. H160] Length = 82 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 4 DECINCDVCEPECPNDAIS 22 >gi|149275883|ref|ZP_01882028.1| ferredoxin 2 with 4Fe-4S binding domain [Pedobacter sp. BAL39] gi|149233311|gb|EDM38685.1| ferredoxin 2 with 4Fe-4S binding domain [Pedobacter sp. BAL39] Length = 116 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|20808295|ref|NP_623466.1| ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] gi|20516898|gb|AAM25070.1| Ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] Length = 156 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C +C+ CP + I P++C DCG C CPV AI Sbjct: 106 VDEEKCIGC--GECLRFCPFKAIELKDGVAHIDPNKCRDCGRCIDVCPVGAI 155 >gi|84502622|ref|ZP_01000741.1| NADH dehydrogenase I, I subunit [Oceanicola batsensis HTCC2597] gi|84389017|gb|EAQ01815.1| NADH dehydrogenase I, I subunit [Oceanicola batsensis HTCC2597] Length = 164 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIDAEP 86 >gi|320640865|gb|EFX10353.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. G5101] Length = 209 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C + CP ++ G+ + ++ D+C+ CG C CP A + + Sbjct: 70 FAYTLSVSCNHCADPICTKNCPTMAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMN 129 Query: 59 TEPG 62 + G Sbjct: 130 EQTG 133 >gi|313682582|ref|YP_004060320.1| 2-oxoglutarate ferredoxin oxidoreductase, delta subunit [Sulfuricurvum kujiense DSM 16994] gi|313155442|gb|ADR34120.1| 2-oxoglutarate ferredoxin oxidoreductase, delta subunit [Sulfuricurvum kujiense DSM 16994] Length = 109 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 10/98 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF---YEGENFLAI-----HPDECIDCGVCEPECPVD 53 +V T+NC C CV VCP YE + L HP+ CI C CE CP Sbjct: 12 VWVNTDNCKACDI--CVSVCPSGVLGMRYEPTSTLGAMISIDHPESCIGCNECELTCPDF 69 Query: 54 AIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 AI + + + A Q I K SL A Sbjct: 70 AIYVADKADYKFAKLTDDAKARQAAIIANKYMSLDQAG 107 >gi|294677802|ref|YP_003578417.1| dimethyl sulfoxide reductase subunit B [Rhodobacter capsulatus SB 1003] gi|294476622|gb|ADE86010.1| dimethyl sulfoxide reductase, B subunit [Rhodobacter capsulatus SB 1003] Length = 238 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C++ CV VCP + + + I C+ CG+C CP A + D G+ Sbjct: 76 RTCVHCENPPCVPVCPTGASQQTADGLVQIDASRCLGCGLCAWACPYGARELDPVAGV 133 >gi|288573330|ref|ZP_06391687.1| Fe-S cluster domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569071|gb|EFC90628.1| Fe-S cluster domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 436 Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C++VCP + + + I P+ C+DCG C +C AI Sbjct: 19 CIKVCPTEAMRVLDGKVMIIPELCVDCGECIRKCEDRAI 57 >gi|225376805|ref|ZP_03754026.1| hypothetical protein ROSEINA2194_02447 [Roseburia inulinivorans DSM 16841] gi|225211301|gb|EEG93655.1| hypothetical protein ROSEINA2194_02447 [Roseburia inulinivorans DSM 16841] Length = 375 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V TE CI C C +C ++ I D+C+ CG C CP DAI D + Sbjct: 191 VATEACIGCG--ACGRICAHGAPVITDHKAKIDHDKCVGCGRCLAVCPKDAISADYADSV 248 Query: 64 ELWLKINSEYA 74 + +EY+ Sbjct: 249 AMLNYKMAEYS 259 >gi|15832637|ref|NP_311410.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. Sakai] gi|168748420|ref|ZP_02773442.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4113] gi|168756293|ref|ZP_02781300.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4401] gi|168761131|ref|ZP_02786138.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4501] gi|168768613|ref|ZP_02793620.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4486] gi|168773565|ref|ZP_02798572.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4196] gi|168778487|ref|ZP_02803494.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4076] gi|168787867|ref|ZP_02812874.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC869] gi|168798892|ref|ZP_02823899.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC508] gi|195936663|ref|ZP_03082045.1| putative anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC4024] gi|208806169|ref|ZP_03248506.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4206] gi|208813124|ref|ZP_03254453.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4045] gi|208821767|ref|ZP_03262087.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4042] gi|209397819|ref|YP_002271991.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4115] gi|217327591|ref|ZP_03443674.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. TW14588] gi|254794467|ref|YP_003079304.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|261223047|ref|ZP_05937328.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. FRIK2000] gi|261259402|ref|ZP_05951935.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. FRIK966] gi|291283742|ref|YP_003500560.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. CB9615] gi|293415785|ref|ZP_06658428.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|331653949|ref|ZP_08354950.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|13362853|dbj|BAB36806.1| putative anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. Sakai] gi|187770599|gb|EDU34443.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4196] gi|188017042|gb|EDU55164.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4113] gi|189003152|gb|EDU72138.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4076] gi|189356621|gb|EDU75040.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4401] gi|189362214|gb|EDU80633.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4486] gi|189368397|gb|EDU86813.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4501] gi|189372381|gb|EDU90797.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC869] gi|189378639|gb|EDU97055.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC508] gi|208725970|gb|EDZ75571.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4206] gi|208734401|gb|EDZ83088.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4045] gi|208741890|gb|EDZ89572.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4042] gi|209159219|gb|ACI36652.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4115] gi|217319958|gb|EEC28383.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. TW14588] gi|254593867|gb|ACT73228.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|290763615|gb|ADD57576.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. CB9615] gi|291433433|gb|EFF06412.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|320188854|gb|EFW63513.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320646308|gb|EFX15235.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H- str. 493-89] gi|320651813|gb|EFX20193.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H- str. H 2687] gi|320657199|gb|EFX25008.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662805|gb|EFX30137.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. USDA 5905] gi|320667609|gb|EFX34524.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. LSU-61] gi|326340319|gb|EGD64123.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|326345003|gb|EGD68747.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] gi|331048798|gb|EGI20874.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] Length = 209 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C + CP ++ G+ + ++ D+C+ CG C CP A + + Sbjct: 70 FAYTLSVSCNHCADPICTKNCPTMAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMN 129 Query: 59 TEPG 62 + G Sbjct: 130 EQTG 133 >gi|24112270|ref|NP_706780.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 301] gi|33301071|sp|Q83RZ7|DMSB_SHIFL RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|24051122|gb|AAN42487.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 301] Length = 205 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|88858486|ref|ZP_01133128.1| putative 4Fe-4S ferredoxin [Pseudoalteromonas tunicata D2] gi|88820103|gb|EAR29916.1| putative 4Fe-4S ferredoxin [Pseudoalteromonas tunicata D2] Length = 82 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++ CI C CV CP + + G I P +C +C C CP+D Sbjct: 1 MALLINNKCINCDM--CVPECPNEAIFMGTKIYQIEPTKCTECIGHYDTPTCISVCPIDC 58 Query: 55 IKPD 58 IKPD Sbjct: 59 IKPD 62 >gi|83953899|ref|ZP_00962620.1| NADH dehydrogenase subunit I [Sulfitobacter sp. NAS-14.1] gi|83841844|gb|EAP81013.1| NADH dehydrogenase subunit I [Sulfitobacter sp. NAS-14.1] Length = 164 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P+ CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|323190717|gb|EFZ75986.1| dimethylsulfoxide reductase, chain B [Escherichia coli RN587/1] Length = 205 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|284920748|emb|CBG33811.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 042] Length = 205 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|269469205|gb|EEZ80741.1| adenylylsulfate reductase beta subunit [uncultured SUP05 cluster bacterium] Length = 111 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 T+V C C H CV++CP D + + + L I P+ C +C C CP AI Sbjct: 3 TFVYMTRCDGCGH--CVDICPSDIMHIDKKYRRALNIEPNMCWECYSCVKACPHQAI 57 >gi|255535196|ref|YP_003095567.1| Ferredoxin [Flavobacteriaceae bacterium 3519-10] gi|255341392|gb|ACU07505.1| Ferredoxin [Flavobacteriaceae bacterium 3519-10] Length = 116 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|239627164|ref|ZP_04670195.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239517310|gb|EEQ57176.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 198 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 MTY ++ + C C DC++ C D F+ I DEC CGVC C DAI Sbjct: 125 MTYHILADKCTGC--GDCIDECEEDAIQGKSRFVHIILQDECTQCGVCLSACEEDAI 179 >gi|298530556|ref|ZP_07017958.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509930|gb|EFI33834.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 247 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA 54 C+ C + CV CP Y+ E + I+ D CI CG C CP A Sbjct: 60 GCMHCDNPTCVHACPSGATYKEEETGIVQINKDMCIGCGNCVVACPYSA 108 >gi|215486024|ref|YP_002328455.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O127:H6 str. E2348/69] gi|312969037|ref|ZP_07783244.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|215264096|emb|CAS08439.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O127:H6 str. E2348/69] gi|312286439|gb|EFR14352.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] Length = 205 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|194445625|ref|YP_002042090.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404288|gb|ACF64510.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 180 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDAIKPDT 59 + CI C CV CP + E LA + CI CG CE CP AIK Sbjct: 38 QQCIGC--AACVNACPSNAL-TVETLLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQ 94 Query: 60 EPGLELWLK 68 E L +W K Sbjct: 95 EYELAVWKK 103 >gi|145590798|ref|YP_001152800.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282566|gb|ABP50148.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 100 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG-LELWLKINSEYA 74 + I+ D CI CG C CP A+ PD E + LW + N ++A Sbjct: 4 VIIYRDNCIACGACITYCPYGALIPDEEGKPILLWDRCNDDFA 46 >gi|153214796|ref|ZP_01949625.1| iron-sulfur cluster-binding protein [Vibrio cholerae 1587] gi|124115138|gb|EAY33958.1| iron-sulfur cluster-binding protein [Vibrio cholerae 1587] Length = 553 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 419 DCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|233599|gb|AAB19473.1| 30 kDa-A polypeptide of iron-sulfur protein fraction of NADH:ubiquinone oxidoreductase [cattle, heart, Peptide Mitochondrial Partial, 139 aa] Length = 139 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 10/51 (19%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCGVCEPECPVDAI 55 IL K+ V+V CF E E + IHPD CI CG C+ CPVDAI Sbjct: 82 ILPKYVQQVQV---SCFNELE--ICIHPDGVIPVLCIYCGFCQEACPVDAI 127 >gi|50120807|ref|YP_049974.1| nitrite reductase complex component [Pectobacterium atrosepticum SCRI1043] gi|49611333|emb|CAG74780.1| nitrite reductase complex component [Pectobacterium atrosepticum SCRI1043] Length = 223 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP--VDAIKPDTE 60 +C C+++ CV+VCP + + ++PD C+ C C CP V I P T+ Sbjct: 90 HSCQHCENSPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYQVRFIHPQTK 147 >gi|332762950|gb|EGJ93200.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-671] Length = 205 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 113 >gi|325829783|ref|ZP_08163241.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella sp. HGA1] gi|325487950|gb|EGC90387.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella sp. HGA1] Length = 267 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI C+ C + CP N I D CI CG C CP AI Sbjct: 212 VCSVGCIGCQK--CAKTCPTQSITVENNLARIDTDTCIGCGTCIEVCPTHAIS 262 >gi|260550890|ref|ZP_05825096.1| ferredoxin [Acinetobacter sp. RUH2624] gi|260406017|gb|EEW99503.1| ferredoxin [Acinetobacter sp. RUH2624] Length = 87 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I C +C C+ CP+D Sbjct: 1 MALLITNDCINCDM--CLPECPNTAIFEGSKVYEIDSSRCTECVGFYEAPTCKAVCPIDC 58 Query: 55 IKPD 58 I+PD Sbjct: 59 IEPD 62 >gi|288574319|ref|ZP_06392676.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570060|gb|EFC91617.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 62 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C+ CV CPV+ + + +C++CG C CPV+AI Sbjct: 14 ETCVGCES--CVGTCPVEAIEMNDGKAVVDEGKCVECGACVSACPVEAIS 61 >gi|237731458|ref|ZP_04561939.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] gi|226906997|gb|EEH92915.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] Length = 205 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 59 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNA 118 Query: 60 EPG 62 G Sbjct: 119 AKG 121 >gi|225028997|ref|ZP_03718189.1| hypothetical protein EUBHAL_03289 [Eubacterium hallii DSM 3353] gi|224953695|gb|EEG34904.1| hypothetical protein EUBHAL_03289 [Eubacterium hallii DSM 3353] Length = 506 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT--- 59 V + N I+ + C + C + EN A I D+C+ CG+C CP AI + Sbjct: 162 VCSYNAIIVQERPCAKACGMKAITSDENGKATIDYDKCVSCGMCLVNCPFGAISDKSQIY 221 Query: 60 ------EPGLELWLKINSEYATQW-PNITTKK 84 + G +++ + + Q+ P +T +K Sbjct: 222 QVIKAIQSGEKVYAAVAPAFVGQFGPKVTPEK 253 >gi|213616092|ref|ZP_03371918.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 203 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Query: 11 LCKHTD---CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 LC H D CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 99 LCNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDA 146 >gi|297578622|ref|ZP_06940550.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297536216|gb|EFH75049.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 195 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIE 160 >gi|91781709|ref|YP_556915.1| ferredoxin [Burkholderia xenovorans LB400] gi|91685663|gb|ABE28863.1| Ferredoxin [Burkholderia xenovorans LB400] Length = 85 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|77164682|ref|YP_343207.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus oceani ATCC 19707] gi|254434195|ref|ZP_05047703.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Nitrosococcus oceani AFC27] gi|76882996|gb|ABA57677.1| Electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus oceani ATCC 19707] gi|207090528|gb|EDZ67799.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Nitrosococcus oceani AFC27] Length = 209 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 16/100 (16%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ EN CI C T C++ CPVD L + EC C +C CPVD I+ Sbjct: 106 VIDENRCIGC--TLCIQACPVDAILGAPKQLHTVITAECTGCELCVAPCPVDCIE----- 158 Query: 62 GLELWLKINSEYAT-QWPNITTKKESLPSAA--KMDGVKQ 98 + + E T +WP T LP AA +++G+ + Sbjct: 159 ----MVPVAPEPGTWKWPFPETTHPPLPIAAHKQIEGIDK 194 >gi|46581201|ref|YP_012009.1| ferredoxin [Desulfovibrio vulgaris str. Hildenborough] gi|120601567|ref|YP_965967.1| ferredoxin [Desulfovibrio vulgaris DP4] gi|46450622|gb|AAS97269.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561796|gb|ABM27540.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio vulgaris DP4] gi|311234870|gb|ADP87724.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio vulgaris RCH1] Length = 295 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 DCVEVCP D + + +C CGVC CP + ++ Sbjct: 145 DCVEVCPFDALHIENGLTHVDLAKCTGCGVCINACPRNTLE 185 >gi|254226570|ref|ZP_04920152.1| iron-sulfur cluster-binding protein [Vibrio cholerae V51] gi|125620906|gb|EAZ49258.1| iron-sulfur cluster-binding protein [Vibrio cholerae V51] Length = 553 Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 419 DCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|304397719|ref|ZP_07379596.1| electron transport complex, RnfABCDGE type, B subunit [Pantoea sp. aB] gi|304354891|gb|EFM19261.1| electron transport complex, RnfABCDGE type, B subunit [Pantoea sp. aB] Length = 192 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 VAFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 163 >gi|297516480|ref|ZP_06934866.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli OP50] Length = 161 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A Sbjct: 15 FAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGA 69 >gi|258515910|ref|YP_003192132.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779615|gb|ACV63509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 95 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 6/64 (9%) Query: 5 VTENCILCKHT-DCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + N LCK CV +CP F + ++P CI CG C CP AI Sbjct: 24 MAVNTRLCKACWKCVSICPRGVIGKIRFLFHRHIYILNPGNCIGCGACAKACPEGAIIVL 83 Query: 59 TEPG 62 PG Sbjct: 84 KRPG 87 >gi|168242578|ref|ZP_02667510.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448985|ref|YP_002046809.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197251323|ref|YP_002147746.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261856|ref|ZP_03161930.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204928218|ref|ZP_03219418.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224584625|ref|YP_002638423.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238909615|ref|ZP_04653452.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194407289|gb|ACF67508.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197215026|gb|ACH52423.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240111|gb|EDY22731.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204322540|gb|EDZ07737.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205338217|gb|EDZ24981.1| formate hydrogenlyase, subunit F [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|224469152|gb|ACN46982.1| hydrogenase 4 Fe-S subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 180 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDAIKPDT 59 + CI C CV CP + E LA + CI CG CE CP AIK Sbjct: 38 QQCIGC--AACVNACPSNAL-TVETLLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQ 94 Query: 60 EPGLELWLK 68 E L +W K Sbjct: 95 EYELAVWKK 103 >gi|217974489|ref|YP_002359240.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] gi|217499624|gb|ACK47817.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] Length = 490 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +C+ C CVEVCP + N L ECI+CG C C +K D +P L Sbjct: 289 DCVDCNL--CVEVCPTGI--DIRNGLQY---ECINCGACVDACNETMLKFDYKPNL 337 >gi|134298565|ref|YP_001112061.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051265|gb|ABO49236.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 196 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 VV + C C CV CP GE I +C++CG C CP AI T Sbjct: 80 VVGDGCTACGL--CVSACPDQAIVLGEEGPCIVESQCLNCGKCAKICPTGAIYTGT 133 >gi|153801160|ref|ZP_01955746.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-3] gi|124123280|gb|EAY42023.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-3] Length = 553 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 +C LC CV VCP + + A+ +C+ CG+C CP A+ Sbjct: 419 DCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQAL 466 >gi|86137588|ref|ZP_01056165.1| NADH dehydrogenase I, I subunit [Roseobacter sp. MED193] gi|85825923|gb|EAQ46121.1| NADH dehydrogenase I, I subunit [Roseobacter sp. MED193] Length = 165 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 42 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 87 >gi|238796067|ref|ZP_04639578.1| hypothetical protein ymoll0001_4030 [Yersinia mollaretii ATCC 43969] gi|238720012|gb|EEQ11817.1| hypothetical protein ymoll0001_4030 [Yersinia mollaretii ATCC 43969] Length = 693 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C CP E N + + ++CI C C CP + TE Sbjct: 68 CHHCEDAPCASTCPNGAIVEMNNSIQVIQEKCIGCKTCMIACPFGMMTVVTE 119 >gi|15641031|ref|NP_230662.1| electron transport complex protein RnfB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587394|ref|ZP_01677164.1| RnfB-related protein [Vibrio cholerae 2740-80] gi|121729983|ref|ZP_01682400.1| RnfB-related protein [Vibrio cholerae V52] gi|147674952|ref|YP_001216488.1| electron transport complex protein RnfB [Vibrio cholerae O395] gi|153215075|ref|ZP_01949792.1| RnfB-related protein [Vibrio cholerae 1587] gi|153800913|ref|ZP_01955499.1| RnfB-related protein [Vibrio cholerae MZO-3] gi|153819293|ref|ZP_01971960.1| RnfB-related protein [Vibrio cholerae NCTC 8457] gi|153823433|ref|ZP_01976100.1| RnfB-related protein [Vibrio cholerae B33] gi|153824911|ref|ZP_01977578.1| RnfB-related protein [Vibrio cholerae MZO-2] gi|153829521|ref|ZP_01982188.1| RnfB-related protein [Vibrio cholerae 623-39] gi|227081190|ref|YP_002809741.1| RnfB-related protein [Vibrio cholerae M66-2] gi|229505385|ref|ZP_04394895.1| electron transport complex protein RnfB [Vibrio cholerae BX 330286] gi|229510945|ref|ZP_04400424.1| electron transport complex protein RnfB [Vibrio cholerae B33] gi|229515402|ref|ZP_04404861.1| electron transport complex protein RnfB [Vibrio cholerae TMA 21] gi|229518066|ref|ZP_04407510.1| electron transport complex protein RnfB [Vibrio cholerae RC9] gi|229529891|ref|ZP_04419281.1| electron transport complex protein RnfB [Vibrio cholerae 12129(1)] gi|229608404|ref|YP_002879052.1| electron transport complex protein RnfB [Vibrio cholerae MJ-1236] gi|254291761|ref|ZP_04962547.1| RnfB-related protein [Vibrio cholerae AM-19226] gi|254848146|ref|ZP_05237496.1| electron transport complex protein rnfB [Vibrio cholerae MO10] gi|255745441|ref|ZP_05419389.1| electron transport complex protein RnfB [Vibrio cholera CIRS 101] gi|262151307|ref|ZP_06028442.1| electron transport complex protein RnfB [Vibrio cholerae INDRE 91/1] gi|262167227|ref|ZP_06034939.1| electron transport complex protein RnfB [Vibrio cholerae RC27] gi|262191541|ref|ZP_06049724.1| electron transport complex protein RnfB [Vibrio cholerae CT 5369-93] gi|298498871|ref|ZP_07008678.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|17369129|sp|Q9KT87|RNFB_VIBCH RecName: Full=Electron transport complex protein rnfB gi|172047411|sp|A5F2R3|RNFB_VIBC3 RecName: Full=Electron transport complex protein rnfB gi|254807927|sp|C3LTR4|RNFB_VIBCM RecName: Full=Electron transport complex protein rnfB gi|9655480|gb|AAF94177.1| RnfB-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548397|gb|EAX58459.1| RnfB-related protein [Vibrio cholerae 2740-80] gi|121628269|gb|EAX60782.1| RnfB-related protein [Vibrio cholerae V52] gi|124114938|gb|EAY33758.1| RnfB-related protein [Vibrio cholerae 1587] gi|124123504|gb|EAY42247.1| RnfB-related protein [Vibrio cholerae MZO-3] gi|126510153|gb|EAZ72747.1| RnfB-related protein [Vibrio cholerae NCTC 8457] gi|126519042|gb|EAZ76265.1| RnfB-related protein [Vibrio cholerae B33] gi|146316835|gb|ABQ21374.1| RnfB-related protein [Vibrio cholerae O395] gi|148874981|gb|EDL73116.1| RnfB-related protein [Vibrio cholerae 623-39] gi|149741423|gb|EDM55453.1| RnfB-related protein [Vibrio cholerae MZO-2] gi|150422354|gb|EDN14315.1| RnfB-related protein [Vibrio cholerae AM-19226] gi|227009078|gb|ACP05290.1| RnfB-related protein [Vibrio cholerae M66-2] gi|227012833|gb|ACP09043.1| RnfB-related protein [Vibrio cholerae O395] gi|229333665|gb|EEN99151.1| electron transport complex protein RnfB [Vibrio cholerae 12129(1)] gi|229344781|gb|EEO09755.1| electron transport complex protein RnfB [Vibrio cholerae RC9] gi|229347171|gb|EEO12131.1| electron transport complex protein RnfB [Vibrio cholerae TMA 21] gi|229350910|gb|EEO15851.1| electron transport complex protein RnfB [Vibrio cholerae B33] gi|229357608|gb|EEO22525.1| electron transport complex protein RnfB [Vibrio cholerae BX 330286] gi|229371059|gb|ACQ61482.1| electron transport complex protein RnfB [Vibrio cholerae MJ-1236] gi|254843851|gb|EET22265.1| electron transport complex protein rnfB [Vibrio cholerae MO10] gi|255736516|gb|EET91913.1| electron transport complex protein RnfB [Vibrio cholera CIRS 101] gi|262024371|gb|EEY43060.1| electron transport complex protein RnfB [Vibrio cholerae RC27] gi|262030923|gb|EEY49552.1| electron transport complex protein RnfB [Vibrio cholerae INDRE 91/1] gi|262032595|gb|EEY51150.1| electron transport complex protein RnfB [Vibrio cholerae CT 5369-93] gi|297543204|gb|EFH79254.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327483732|gb|AEA78139.1| Electron transport complex protein RnfB [Vibrio cholerae LMA3894-4] Length = 195 Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 106 VAFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIE 160 >gi|330823669|ref|YP_004386972.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] gi|329309041|gb|AEB83456.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] Length = 687 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C LC CV CP + L C+ CG+CE CP AI Sbjct: 556 DRCTLC--MSCVSACPASALQDNPQAPQLRFIERNCVQCGLCERTCPEGAI 604 >gi|332160309|ref|YP_004296886.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664539|gb|ADZ41183.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859581|emb|CBX69922.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica W22703] Length = 204 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ + D CI C C CP A + D Sbjct: 58 FAYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVSEDICIGCRYCHMACPYGAPQYDE 117 Query: 60 EPG 62 G Sbjct: 118 AKG 120 >gi|323701707|ref|ZP_08113378.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533243|gb|EGB23111.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 92 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + Y +T C C C +VCP Y E+ I+ C CG C CP AI +T+ Sbjct: 5 IQYFITNKCKNCAQ--CQDVCPEKAIYAAEDKYCINDARCNGCGSCVEICPEQAIVKETD 62 >gi|323141693|ref|ZP_08076571.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413849|gb|EFY04690.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 296 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 8/49 (16%) Query: 8 NCILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 N + C + D C+E C +DC + G++ ECI CG C CPV AI Sbjct: 249 NAVKCINCDRCMEHCKMDCRHVGDS-------ECIACGECRKVCPVKAI 290 >gi|318604458|emb|CBY25956.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica Y11] Length = 204 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C C +VCP ++ ++ F+ + D CI C C CP A + D Sbjct: 58 FAYYLSIACNHCSDPTCTKVCPTGAMHKRDDGFVVVSEDICIGCRYCHMACPYGAPQYDE 117 Query: 60 EPG 62 G Sbjct: 118 AKG 120 >gi|296116527|ref|ZP_06835137.1| NADH dehydrogenase subunit I [Gluconacetobacter hansenii ATCC 23769] gi|295976739|gb|EFG83507.1| NADH dehydrogenase subunit I [Gluconacetobacter hansenii ATCC 23769] Length = 162 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP +AI + EP Sbjct: 39 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEATCPAEAITIEAEP 84 >gi|261403853|ref|YP_003248077.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370846|gb|ACX73595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 206 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 10 ILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 I+C H CV+VCP + E I D+C+ CG+C CP+ IK Sbjct: 67 IICAHCGLCVDVCPTNAIIEDR--FTIDNDKCLKCGICVLVCPIPIIK 112 >gi|237747777|ref|ZP_04578257.1| electron transport complex protein [Oxalobacter formigenes OXCC13] gi|229379139|gb|EEO29230.1| electron transport complex protein [Oxalobacter formigenes OXCC13] Length = 220 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 15 TDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI----KPDTEPGLELW 66 T C++ CPVD G+ + D C C +C P CP+D I T P E+W Sbjct: 95 TICIQACPVDAIVGTGKMMHTVINDYCTGCELCIPTCPLDCIGLKNMSATLPFSEVW 151 >gi|167042056|gb|ABZ06791.1| putative 4Fe-4S binding domain protein [uncultured marine microorganism HF4000_141I21] Length = 156 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 T+V C C H CV++CP D + E + I P+ C +C C CP +AI Sbjct: 3 TFVYMTRCDGCGH--CVDICPSDIMHIDETIRRAVNIEPNFCWECYSCVKACPQNAI 57 >gi|153956228|ref|YP_001396993.1| hypothetical protein CKL_3632 [Clostridium kluyveri DSM 555] gi|219856551|ref|YP_002473673.1| hypothetical protein CKR_3208 [Clostridium kluyveri NBRC 12016] gi|146349086|gb|EDK35622.1| Conserved hypothetical protein, ferredoxin-related [Clostridium kluyveri DSM 555] gi|219570275|dbj|BAH08259.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 217 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ NC+ CK C + C + YE +N L HPD CI CG C CP AI D Sbjct: 162 VSSNCVSCKL--CEKKCSLGIVPYEYKNDLLSHPD-CIQCGKCVIICPKKAIGYD 213 >gi|125577451|gb|EAZ18673.1| hypothetical protein OsJ_34194 [Oryza sativa Japonica Group] Length = 628 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+EV P I + CI CG+C +CP DAI+ Sbjct: 38 CIEVTP------ASKLAFISEELCIGCGICVKKCPFDAIE 71 >gi|119872287|ref|YP_930294.1| thiamine pyrophosphate binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673695|gb|ABL87951.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Pyrobaculum islandicum DSM 4184] Length = 592 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + P C+ CGVC CP +A K E E+WL+I Sbjct: 556 VDPALCVGCGVCAEVCPFNAFK--LEGRKEIWLEI 588 >gi|39995884|ref|NP_951835.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|39982648|gb|AAR34108.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|298504898|gb|ADI83621.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens KN400] Length = 277 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPV 52 E C+ C C VCPV F + E + H +CI C C CP Sbjct: 82 EMCMHCNDPACASVCPVGAFEKTAEGPVVYHSKKCIGCRFCMVACPF 128 >gi|220931057|ref|YP_002507965.1| hydrogenase large subunit domain protein [Halothermothrix orenii H 168] gi|219992367|gb|ACL68970.1| hydrogenase large subunit domain protein [Halothermothrix orenii H 168] Length = 491 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 24/52 (46%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VVT C C CV CP N + ++C++CG+C CP AI Sbjct: 115 VVTNACRNCVAHHCVNSCPRGAITIVNNQAYVIREKCVECGLCVKACPYGAI 166 >gi|87311263|ref|ZP_01093385.1| molybdopterin oxidoreductase, iron sulfur subunit [Blastopirellula marina DSM 3645] gi|87286003|gb|EAQ77915.1| molybdopterin oxidoreductase, iron sulfur subunit [Blastopirellula marina DSM 3645] Length = 536 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVD 53 VT C C C++ CPV + + + +H D+CI C C CP D Sbjct: 115 VTTACHHCADPGCLKGCPVKAYDKDPVTGIVVHLDDQCIGCKYCTMMCPYD 165 >gi|15641524|ref|NP_231156.1| iron-sulfur cluster-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587222|ref|ZP_01676996.1| iron-sulfur cluster-binding protein [Vibrio cholerae 2740-80] gi|153818533|ref|ZP_01971200.1| iron-sulfur cluster-binding protein [Vibrio cholerae NCTC 8457] gi|153822815|ref|ZP_01975482.1| iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|227081674|ref|YP_002810225.1| iron-sulfur cluster-binding protein [Vibrio cholerae M66-2] gi|229508536|ref|ZP_04398039.1| iron-sulfur cluster-binding protein [Vibrio cholerae BX 330286] gi|229511393|ref|ZP_04400872.1| iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|229518532|ref|ZP_04407975.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC9] gi|229607941|ref|YP_002878589.1| iron-sulfur cluster-binding protein [Vibrio cholerae MJ-1236] gi|254848637|ref|ZP_05237987.1| iron-sulfur cluster-binding protein [Vibrio cholerae MO10] gi|262161670|ref|ZP_06030688.1| iron-sulfur cluster-binding protein [Vibrio cholerae INDRE 91/1] gi|298498397|ref|ZP_07008204.1| iron-sulfur cluster-binding protein [Vibrio cholerae MAK 757] gi|9656020|gb|AAF94670.1| iron-sulfur cluster-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548565|gb|EAX58619.1| iron-sulfur cluster-binding protein [Vibrio cholerae 2740-80] gi|126510936|gb|EAZ73530.1| iron-sulfur cluster-binding protein [Vibrio cholerae NCTC 8457] gi|126519674|gb|EAZ76897.1| iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|227009562|gb|ACP05774.1| iron-sulfur cluster-binding protein [Vibrio cholerae M66-2] gi|229343221|gb|EEO08196.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC9] gi|229351358|gb|EEO16299.1| iron-sulfur cluster-binding protein [Vibrio cholerae B33] gi|229354490|gb|EEO19413.1| iron-sulfur cluster-binding protein [Vibrio cholerae BX 330286] gi|229370596|gb|ACQ61019.1| iron-sulfur cluster-binding protein [Vibrio cholerae MJ-1236] gi|254844342|gb|EET22756.1| iron-sulfur cluster-binding protein [Vibrio cholerae MO10] gi|262028402|gb|EEY47057.1| iron-sulfur cluster-binding protein [Vibrio cholerae INDRE 91/1] gi|297542730|gb|EFH78780.1| iron-sulfur cluster-binding protein [Vibrio cholerae MAK 757] Length = 553 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 T +C LC CV VCP + + A+ +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACP 462 >gi|296242763|ref|YP_003650250.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095347|gb|ADG91298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosphaera aggregans DSM 11486] Length = 160 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 17 CVEVCPVDCF----YEGE-------NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C +VCP C EG+ F I +C CG+C CPV A+ T G EL Sbjct: 51 CQQVCPAACIDMVVVEGDYSQNPRKRFPRIDHSKCTFCGLCVEYCPVAALSMTTVTGYEL 110 Query: 66 W 66 + Sbjct: 111 F 111 >gi|289548611|ref|YP_003473599.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermocrinis albus DSM 14484] gi|289182228|gb|ADC89472.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermocrinis albus DSM 14484] Length = 232 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + + ++C+ C+ CV VCP Y E + + ++ D+CI C +C CP Sbjct: 66 VFHLPKSCLHCQDAPCVPVCPTGASYKREQDGIVLVNYDDCIGCKLCSWSCP 117 >gi|239817316|ref|YP_002946226.1| 4Fe-4S ferredoxin, iron-sulfur binding [Variovorax paradoxus S110] gi|239803893|gb|ACS20960.1| 4Fe-4S ferredoxin, iron-sulfur binding [Variovorax paradoxus S110] Length = 95 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 15/18 (83%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+C VCEPECP DAI Sbjct: 4 DECINCDVCEPECPNDAI 21 >gi|163732050|ref|ZP_02139496.1| NADH dehydrogenase subunit I [Roseobacter litoralis Och 149] gi|161394348|gb|EDQ18671.1| NADH dehydrogenase subunit I [Roseobacter litoralis Och 149] Length = 164 Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIDAEP 86 >gi|157375933|ref|YP_001474533.1| aspartate carbamoyltransferase [Shewanella sediminis HAW-EB3] gi|157318307|gb|ABV37405.1| aspartate carbamoyltransferase [Shewanella sediminis HAW-EB3] Length = 686 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 12 CKHTD---CVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 C H D C++ CP + + + A+ P+ C CG C CP +A + D G Sbjct: 164 CNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLDPVEG 219 >gi|254247589|ref|ZP_04940910.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia PC184] gi|124872365|gb|EAY64081.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia PC184] Length = 342 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 124 CIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCI 169 >gi|52550001|gb|AAU83850.1| acetyl-CoA decarbonylase/synthase subunit alpha [uncultured archaeon GZfos34G5] Length = 826 Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 12 CKHTD-CVEVCP----VDCFYEGENFLAIHPDECIDCGVCEPECP 51 C D C+EVCP + + + LA D CI CG+CE CP Sbjct: 417 CNSCDICIEVCPNKQAISKAMDDVSALADIYDNCIFCGLCERACP 461 >gi|323699778|ref|ZP_08111690.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio sp. ND132] gi|323459710|gb|EGB15575.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans ND132] Length = 141 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTE 60 C+ C C E CP + + I + CI CG C CPVDAI D + Sbjct: 54 CLACHPAPCAEACPTGSLSQRRDGGVIQKRNLCIRCGRCAEACPVDAIFLDHQ 106 >gi|300704663|ref|YP_003746266.1| 4fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum CFBP2957] gi|299072327|emb|CBJ43661.1| 4Fe-4S ferredoxin, iron-sulphur binding [Ralstonia solanacearum CFBP2957] Length = 268 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK--P 57 + + E+CI C T C++ CPVD + + D C C +C CPVD I P Sbjct: 82 LAVIDPEHCIGC--TLCIQACPVDAIVGAPKAMHVVLADWCTGCDLCVAPCPVDCIDMVP 139 Query: 58 DT--EPGLELWLKINSEYA 74 T G + W + ++ A Sbjct: 140 VTGERAGWDAWSQAQADAA 158 >gi|257790458|ref|YP_003181064.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella lenta DSM 2243] gi|257474355|gb|ACV54675.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella lenta DSM 2243] Length = 267 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI C+ C + CP N I D CI CG C CP AI Sbjct: 212 VCSVGCIGCQK--CAKTCPTQSITVENNLARIDTDTCIGCGTCIEVCPTHAIS 262 >gi|159041649|ref|YP_001540901.1| thiamine pyrophosphate binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920484|gb|ABW01911.1| thiamine pyrophosphate protein domain protein TPP-binding [Caldivirga maquilingensis IC-167] Length = 606 Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 15/23 (65%) Query: 35 IHPDECIDCGVCEPECPVDAIKP 57 I P+ C+ C VC CP +AIKP Sbjct: 570 IDPNMCVGCSVCAQVCPYNAIKP 592 >gi|187922588|ref|YP_001894230.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] gi|187713782|gb|ACD15006.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] Length = 85 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 15/19 (78%), Positives = 16/19 (84%) Query: 38 DECIDCGVCEPECPVDAIK 56 DECI+C VCEPECP DAI Sbjct: 7 DECINCDVCEPECPNDAIS 25 >gi|3355643|emb|CAA08780.1| tungsten formylmethanofuran dehydrogenase subunit fwdF [Methanothermobacter wolfeii] Length = 349 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 12/62 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C CP D + I D CI CG+CE CPVDAI+ Sbjct: 113 ETCIQCKA--CETACPQDAITITRELPERKDLVTGEIEIDKDTCIYCGMCEEMCPVDAIE 170 Query: 57 PD 58 D Sbjct: 171 ID 172 >gi|326381404|ref|ZP_08203098.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199651|gb|EGD56831.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 336 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP E + + D C CG C CP ++ Sbjct: 132 SDVCKHCTHAGCLDVCPTGAMMRTEFGTVVVQADICNGCGTCVAGCPFGVVE 183 >gi|297184133|gb|ADI20252.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 117 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|303239632|ref|ZP_07326157.1| hydrogenase large subunit domain protein [Acetivibrio cellulolyticus CD2] gi|302592803|gb|EFL62526.1| hydrogenase large subunit domain protein [Acetivibrio cellulolyticus CD2] Length = 446 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 7/93 (7%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 T+C++ CP + + I + CIDCG C CP A K T+ ++ + A Sbjct: 19 TNCIKRCPTEAIRVRKGKARIIAERCIDCGECIRVCPYHAKKAITDQ-FDIINNFKFKVA 77 Query: 75 TQWPNITTKKES------LPSAAKMDGVKQKYE 101 P I + +S L +A K+ G YE Sbjct: 78 IPAPTIYGQFKSARSTNHLLTALKLIGFDHVYE 110 >gi|269139711|ref|YP_003296412.1| hydrogenase 2 protein [Edwardsiella tarda EIB202] gi|267985372|gb|ACY85201.1| hydrogenase 2 protein [Edwardsiella tarda EIB202] gi|304559580|gb|ADM42244.1| Hydrogenase-2 operon protein hybA precursor [Edwardsiella tarda FL6-60] Length = 327 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 109 IKKQCMHCVDPNCVSVCPVSALRKDPKTGIVTYDPDVCTGCRYCMVACPFDVPKYD 164 >gi|209695338|ref|YP_002263267.1| electron transport complex protein RnfB [Aliivibrio salmonicida LFI1238] gi|226735410|sp|B6EGH6|RNFB_ALISL RecName: Full=Electron transport complex protein rnfB gi|208009290|emb|CAQ79556.1| electron transport complex protein RnfB [Aliivibrio salmonicida LFI1238] Length = 194 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + ++ + CI C T C++ CPVD G L + EC C +C CP D I+ Sbjct: 106 IAFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIEAECTGCDLCVAPCPTDCIE 160 >gi|326800398|ref|YP_004318217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingobacterium sp. 21] gi|326551162|gb|ADZ79547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingobacterium sp. 21] Length = 117 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 14/18 (77%), Positives = 16/18 (88%) Query: 38 DECIDCGVCEPECPVDAI 55 DECI+CG CEPECP +AI Sbjct: 7 DECINCGACEPECPNNAI 24 >gi|320546695|ref|ZP_08041006.1| 4Fe-4S ferredoxin, iron-sulfur binding [Streptococcus equinus ATCC 9812] gi|320448574|gb|EFW89306.1| 4Fe-4S ferredoxin, iron-sulfur binding [Streptococcus equinus ATCC 9812] Length = 277 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPVDA 54 + V +N CK+ +CP+ F + ++ A+ + D+CI CG C+ CP+D Sbjct: 194 LAVVFKDNRAFCKY-----LCPITVFLKPMSYFALFRVKCNKDKCISCGKCKKVCPMDV 247 >gi|269102700|ref|ZP_06155397.1| iron-sulfur cluster-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162598|gb|EEZ41094.1| iron-sulfur cluster-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 552 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++C LC CV VCP + + L I D CI CG+C+ CP + I EPG Sbjct: 417 ADDCTLC--MGCVAVCPTRALHAIGDRPGLLFIEED-CIQCGMCQKACPENVIT--VEPG 471 Query: 63 L 63 Sbjct: 472 F 472 >gi|254512016|ref|ZP_05124083.1| NADH dehydrogenase i, i subunit [Rhodobacteraceae bacterium KLH11] gi|221535727|gb|EEE38715.1| NADH dehydrogenase i, i subunit [Rhodobacteraceae bacterium KLH11] Length = 164 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 19 EVCPVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 E P+ + GE+ L +P + CI C +CE CP AI D EP Sbjct: 41 EKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIDAEP 86 >gi|219853104|ref|YP_002467536.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219547363|gb|ACL17813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 424 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 18/64 (28%) Query: 16 DCVEVCPVDCFYEGE------------------NFLAIHPDECIDCGVCEPECPVDAIKP 57 DC EVCPV+ + + N + PD CI+CG+C C +A+ Sbjct: 109 DCEEVCPVEVYNRFDAGIGVRKAIYKPHAQVVPNIMIKDPDHCIECGLCYDICGRNAVLR 168 Query: 58 DTEP 61 + P Sbjct: 169 EQSP 172 >gi|167628355|ref|YP_001678854.1| iron-sulfur cluster-binding protein [Heliobacterium modesticaldum Ice1] gi|167591095|gb|ABZ82843.1| iron-sulfur cluster-binding protein [Heliobacterium modesticaldum Ice1] Length = 374 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C+ C++ CP D E + D+CI C C+ CP A++ Sbjct: 313 DKCIGCR--ICLQSCPADAL-RMERIPQLDKDKCIGCLCCQEMCPERAVE 359 >gi|167624839|ref|YP_001675133.1| dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] gi|167354861|gb|ABZ77474.1| Dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] Length = 221 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CV+ CP ++ + + + D CI C C CP DA + D Sbjct: 77 FAYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAQDLCIGCESCSRACPYDAPQID 136 Query: 59 TE 60 E Sbjct: 137 RE 138 >gi|111023805|ref|YP_706777.1| ferredoxin [Rhodococcus jostii RHA1] gi|226366241|ref|YP_002784024.1| ferredoxin [Rhodococcus opacus B4] gi|110823335|gb|ABG98619.1| probable ferredoxin [Rhodococcus jostii RHA1] gi|226244731|dbj|BAH55079.1| putative ferredoxin [Rhodococcus opacus B4] Length = 75 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 15 TDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAI 55 T CVE+CP+D G+ F+ H DEC CG C CP A+ Sbjct: 24 TLCVEICPLDSLAINPENGKAFM--HVDECWYCGPCAARCPTGAV 66 >gi|89901860|ref|YP_524331.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89346597|gb|ABD70800.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 545 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 8/53 (15%) Query: 11 LCKH--------TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 LC H T C++VC V N + I P C C C CP A+ Sbjct: 168 LCAHGVSGFQGCTRCLDVCSVQAIASAGNTVRIDPYLCQGCATCTLACPTGAL 220 >gi|83643884|ref|YP_432319.1| ferredoxin [Hahella chejuensis KCTC 2396] gi|83631927|gb|ABC27894.1| Ferredoxin [Hahella chejuensis KCTC 2396] Length = 85 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 15/23 (65%), Positives = 18/23 (78%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D+CI+C VCEPECP +AI P E Sbjct: 7 DDCINCDVCEPECPNEAISPGEE 29 >gi|56414800|ref|YP_151875.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363728|ref|YP_002143365.1| formate hydrogenlyase complex iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129057|gb|AAV78563.1| formate hydrogenlyase subunit 6 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095205|emb|CAR60756.1| formate hydrogenlyase subunit 6 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 180 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDAIKPDT 59 + CI C CV CP + E LA + CI CG CE CP AIK Sbjct: 38 QQCIGC--AACVNACPSNAL-TVETLLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQ 94 Query: 60 EPGLELWLK 68 E L +W K Sbjct: 95 EYELAVWKK 103 >gi|50120165|ref|YP_049332.1| hydrogenase 2 protein HybA [Pectobacterium atrosepticum SCRI1043] gi|49610691|emb|CAG74136.1| hydrogenase-2 operon protein [Pectobacterium atrosepticum SCRI1043] Length = 336 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + +H PD C C C CP + K D Sbjct: 114 IKKQCMHCVDPNCVSVCPVQALRKDAHTGIVHYDPDVCTGCRYCIVGCPFNVPKYD 169 >gi|163846207|ref|YP_001634251.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus aurantiacus J-10-fl] gi|222523957|ref|YP_002568427.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus sp. Y-400-fl] gi|163667496|gb|ABY33862.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus aurantiacus J-10-fl] gi|222447836|gb|ACM52102.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chloroflexus sp. Y-400-fl] Length = 1029 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECP 51 Y++ NC+ C+ C VCPV YEG N + + C+ C CP Sbjct: 844 YMMPVNCMQCEKAPCEVVCPVAATVHDYEGLNNMVY--NRCVGTKYCSNNCP 893 >gi|219667305|ref|YP_002457740.1| glycyl-radical enzyme activating protein family [Desulfitobacterium hafniense DCB-2] gi|219537565|gb|ACL19304.1| glycyl-radical enzyme activating protein family [Desulfitobacterium hafniense DCB-2] Length = 299 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 CI C CV CP F E L I +C CG+C EC +++ PD + + Sbjct: 54 CIKCG--TCVAKCPQQVFEIREGKLDITRQKCDFCGICVRECSTTSLEISGENPDFDKIM 111 Query: 64 ELWLKINSEYATQWPNIT-TKKESLPSAA 91 E+ L+ S Y +T + E+L A Sbjct: 112 EIILQDKSYYDMSGGGVTLSGGEALAHRA 140 Searching..................................................done Results from round 2 >gi|110635706|ref|YP_675914.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110286690|gb|ABG64749.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 138 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 27 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 86 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N++YA +WPNIT KKE A DG+++K+EKYFSP PG + Sbjct: 87 PGLEKWLQVNADYAEKWPNITAKKEPPADAKDWDGIEEKFEKYFSPEPGTGD 138 >gi|225628328|ref|ZP_03786362.1| Ferredoxin-2 [Brucella ceti str. Cudo] gi|225616174|gb|EEH13222.1| Ferredoxin-2 [Brucella ceti str. Cudo] Length = 138 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 27 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 86 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 87 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLEQYFSPEAGSGD 138 >gi|254780416|ref|YP_003064829.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040093|gb|ACT56889.1| putative ferredoxin protein [Candidatus Liberibacter asiaticus str. psy62] Length = 113 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT Sbjct: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 >gi|319409357|emb|CBI83001.1| ferredoxin II [Bartonella schoenbuchensis R1] Length = 112 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 85/111 (76%), Positives = 94/111 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N EYAT+WPN+TT+K LP A +MDGV K EKYFS NPG Sbjct: 61 PGLETWLELNREYATKWPNLTTQKSPLPQAKEMDGVPNKLEKYFSENPGSG 111 >gi|49474701|ref|YP_032743.1| ferredoxin II [Bartonella quintana str. Toulouse] gi|6984158|gb|AAF34779.1|AF228062_1 ferredoxin II [Bartonella quintana] gi|49240205|emb|CAF26673.1| Ferredoxin II [Bartonella quintana str. Toulouse] Length = 112 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 83/111 (74%), Positives = 94/111 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVITDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YAT+WPN+TT+K+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYATKWPNLTTRKDPLPQAKEMDGVANKLEKYFSENPGSG 111 >gi|227823779|ref|YP_002827752.1| putative ferredoxin protein [Sinorhizobium fredii NGR234] gi|227342781|gb|ACP26999.1| putative ferredoxin protein [Sinorhizobium fredii NGR234] Length = 112 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 85/112 (75%), Positives = 99/112 (88%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL++WLK+N+++ATQWPNIT K++ LP A +MDGV+ KYE+YFS PG + Sbjct: 61 PGLDMWLKLNADFATQWPNITVKRDPLPEAKEMDGVEGKYEQYFSEKPGQGD 112 >gi|240851256|ref|YP_002972659.1| ferredoxin II [Bartonella grahamii as4aup] gi|240268379|gb|ACS51967.1| ferredoxin II [Bartonella grahamii as4aup] Length = 113 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 82/111 (73%), Positives = 92/111 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PDTE Sbjct: 1 MTHVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+TTKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYANKWPNLTTKKDPLPQAKEMDGVPNKLEKYFSENPGSG 111 >gi|163869172|ref|YP_001610424.1| ferredoxin II [Bartonella tribocorum CIP 105476] gi|161018871|emb|CAK02429.1| ferredoxin II [Bartonella tribocorum CIP 105476] Length = 113 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 82/111 (73%), Positives = 92/111 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PDTE Sbjct: 1 MTHVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIVPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+TTKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLHYANKWPNLTTKKDPLPQAKEMDGVPNKLEKYFSENPGSG 111 >gi|15967011|ref|NP_387364.1| putative ferredoxin protein [Sinorhizobium meliloti 1021] gi|307302479|ref|ZP_07582236.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti BL225C] gi|307316191|ref|ZP_07595635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti AK83] gi|15076284|emb|CAC47837.1| Putative ferredoxin protein [Sinorhizobium meliloti 1021] gi|306898031|gb|EFN28773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti AK83] gi|306903149|gb|EFN33739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium meliloti BL225C] Length = 112 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 86/112 (76%), Positives = 100/112 (89%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL++WLK+N+E++TQWPNIT K++ LP A +MDGV++KYEKYFS PG + Sbjct: 61 PGLDMWLKLNAEFSTQWPNITVKRDPLPEAKEMDGVEEKYEKYFSSEPGQGD 112 >gi|254473211|ref|ZP_05086609.1| ferredoxin II [Pseudovibrio sp. JE062] gi|211957932|gb|EEA93134.1| ferredoxin II [Pseudovibrio sp. JE062] Length = 112 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 84/112 (75%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE W+++N+EYA +WPN+T KK+ LP AA+ DGVK+K EKYFS PG + Sbjct: 61 PGLEKWVELNAEYAEKWPNLTVKKDQLPEAAEFDGVKEKLEKYFSEKPGTGD 112 >gi|163853279|ref|YP_001641322.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|218532095|ref|YP_002422911.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240140687|ref|YP_002965167.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methylobacterium extorquens AM1] gi|254563202|ref|YP_003070297.1| ferredoxin II [Methylobacterium extorquens DM4] gi|163664884|gb|ABY32251.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] gi|218524398|gb|ACK84983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240010664|gb|ACS41890.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methylobacterium extorquens AM1] gi|254270480|emb|CAX26480.1| ferredoxin II [Methylobacterium extorquens DM4] Length = 112 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WLK+N++YA WPNIT KK++ A + DGV K E +FSPNPG + Sbjct: 61 GDLESWLKLNADYAKTWPNITQKKDAPSDAKQWDGVSGKLEAHFSPNPGSGD 112 >gi|220921711|ref|YP_002497012.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946317|gb|ACL56709.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 112 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 82/112 (73%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WLK+N++ A WPNIT KK + A + DGV KYE +FSPNPG + Sbjct: 61 PGLEKWLKLNADLAKSWPNITQKKPAPADAKEWDGVAGKYEAHFSPNPGSGD 112 >gi|49476178|ref|YP_034219.1| ferredoxin II [Bartonella henselae str. Houston-1] gi|49238986|emb|CAF28286.1| Ferredoxin II [Bartonella henselae str. Houston-1] Length = 112 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 82/111 (73%), Positives = 94/111 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTDNCIHCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N +YA +WPN+TT+K+ LP A +MDG+ K EKYFS NPG Sbjct: 61 PGLEKWLELNLQYANKWPNLTTRKDPLPQAKEMDGIPDKLEKYFSENPGSG 111 >gi|150398307|ref|YP_001328774.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150029822|gb|ABR61939.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 112 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 85/112 (75%), Positives = 100/112 (89%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAGAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL++WLK+N++++TQWPNIT K++ LP A +MDG++ KYEKYFSP PG + Sbjct: 61 PGLDMWLKLNADFSTQWPNITVKRDPLPEATEMDGLEGKYEKYFSPEPGQGD 112 >gi|86359603|ref|YP_471495.1| ferredoxin III protein [Rhizobium etli CFN 42] gi|190893876|ref|YP_001980418.1| ferredoxin III protein [Rhizobium etli CIAT 652] gi|86283705|gb|ABC92768.1| ferredoxin III protein [Rhizobium etli CFN 42] gi|190699155|gb|ACE93240.1| ferredoxin III protein [Rhizobium etli CIAT 652] Length = 112 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 86/112 (76%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYA+ WPNIT KK+ LP A +MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYASIWPNITVKKDPLPEAKEMDGQTGKFEKYFSEKPGSGD 112 >gi|209551386|ref|YP_002283303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537142|gb|ACI57077.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 112 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 87/112 (77%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KK+ LP A +MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKDPLPEAKEMDGETGKFEKYFSEKPGSGD 112 >gi|92119089|ref|YP_578818.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801983|gb|ABE64358.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 133 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AI D+E Sbjct: 22 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIFADSE 81 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WLK+N+EYA WPNIT K+++ A DGV K E+YFS NPG + Sbjct: 82 PGLENWLKLNAEYAAVWPNITIKRDAPADAKAFDGVADKLEQYFSANPGTGD 133 >gi|170742913|ref|YP_001771568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168197187|gb|ACA19134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 112 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WLK+N+++A WPNIT KK + A + DGV K++ +FS NPG + Sbjct: 61 PGLERWLKLNADFAKNWPNITQKKTAPSDAKEWDGVAGKFDAHFSSNPGTGD 112 >gi|116254342|ref|YP_770180.1| ferredoxin II (FdII) [Rhizobium leguminosarum bv. viciae 3841] gi|115258990|emb|CAK10099.1| putative ferredoxin II (FdII) [Rhizobium leguminosarum bv. viciae 3841] Length = 112 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 87/112 (77%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KK+ LP A MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKDPLPEAKDMDGETGKFEKYFSEKPGSGD 112 >gi|153008467|ref|YP_001369682.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|239832850|ref|ZP_04681179.1| Ferredoxin-2 [Ochrobactrum intermedium LMG 3301] gi|151560355|gb|ABS13853.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ochrobactrum anthropi ATCC 49188] gi|239825117|gb|EEQ96685.1| Ferredoxin-2 [Ochrobactrum intermedium LMG 3301] Length = 112 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 82/112 (73%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K EKYFS PG + Sbjct: 61 PGLDKWLELNTEYAAKWPNITAKKDALPEAKEMDGVAGKLEKYFSAEPGSGD 112 >gi|241206828|ref|YP_002977924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860718|gb|ACS58385.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 112 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 88/112 (78%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYAT WPNIT KKE LP A MDG K+EKYFS PG + Sbjct: 61 PGLDKWLKINTEYATIWPNITVKKEPLPEAKDMDGETGKFEKYFSEKPGSGD 112 >gi|27375268|ref|NP_766797.1| ferredoxin [Bradyrhizobium japonicum USDA 110] gi|27348404|dbj|BAC45422.1| ferredoxin [Bradyrhizobium japonicum USDA 110] Length = 112 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 85/112 (75%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N++YA WPNIT KKES A + DG++ K+EKYFSPNPG + Sbjct: 61 PGLEKWLSVNADYAKSWPNITQKKESPADAKEFDGMEGKFEKYFSPNPGSGD 112 >gi|188583532|ref|YP_001926977.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|179347030|gb|ACB82442.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] Length = 112 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WLK+N++YA WPNIT KK++ A + DGV K E +FSPNPG + Sbjct: 61 GNLESWLKLNADYAKTWPNITQKKDAPTDAKQWDGVGGKLEAHFSPNPGSGD 112 >gi|39933566|ref|NP_945842.1| ferredoxin II [Rhodopseudomonas palustris CGA009] gi|192288920|ref|YP_001989525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodopseudomonas palustris TIE-1] gi|39647412|emb|CAE25933.1| ferredoxin II [Rhodopseudomonas palustris CGA009] gi|192282669|gb|ACE99049.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodopseudomonas palustris TIE-1] Length = 112 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++NSEYA WPN+T KK++ A + DG K+EKYFS PG + Sbjct: 61 PGLEKWLELNSEYAKTWPNLTQKKDAPADAKEFDGQAGKFEKYFSSEPGSGD 112 >gi|86747676|ref|YP_484172.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86570704|gb|ABD05261.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 112 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 84/112 (75%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++NSEYA WPN+T KK+S A DGV+ K+EK+FSP PG + Sbjct: 61 PGLEKWLELNSEYAKTWPNLTQKKDSPDDAKTFDGVEGKFEKFFSPEPGTGD 112 >gi|256061798|ref|ZP_05451933.1| Ferredoxin-2 [Brucella neotomae 5K33] gi|261325800|ref|ZP_05964997.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella neotomae 5K33] gi|261301780|gb|EEY05277.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella neotomae 5K33] Length = 112 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLERYFSPEAGSGD 112 >gi|17986561|ref|NP_539195.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|23502624|ref|NP_698751.1| ferredoxin A [Brucella suis 1330] gi|62290637|ref|YP_222430.1| FdxA, ferredoxin A [Brucella abortus bv. 1 str. 9-941] gi|82700551|ref|YP_415125.1| 7Fe ferredoxin [Brucella melitensis biovar Abortus 2308] gi|148559196|ref|YP_001259611.1| ferredoxin A [Brucella ovis ATCC 25840] gi|161619692|ref|YP_001593579.1| ferredoxin-2 [Brucella canis ATCC 23365] gi|163845344|ref|YP_001622999.1| hypothetical protein BSUIS_B1243 [Brucella suis ATCC 23445] gi|189024849|ref|YP_001935617.1| 7Fe ferredoxin [Brucella abortus S19] gi|225853217|ref|YP_002733450.1| ferredoxin-2 [Brucella melitensis ATCC 23457] gi|237816138|ref|ZP_04595133.1| Ferredoxin-2 [Brucella abortus str. 2308 A] gi|254689926|ref|ZP_05153180.1| Ferredoxin-2 [Brucella abortus bv. 6 str. 870] gi|254694418|ref|ZP_05156246.1| Ferredoxin-2 [Brucella abortus bv. 3 str. Tulya] gi|254698077|ref|ZP_05159905.1| Ferredoxin-2 [Brucella abortus bv. 2 str. 86/8/59] gi|254700419|ref|ZP_05162247.1| Ferredoxin-2 [Brucella suis bv. 5 str. 513] gi|254703538|ref|ZP_05165366.1| Ferredoxin-2 [Brucella suis bv. 3 str. 686] gi|254708374|ref|ZP_05170202.1| Ferredoxin-2 [Brucella pinnipedialis M163/99/10] gi|254708773|ref|ZP_05170584.1| Ferredoxin-2 [Brucella pinnipedialis B2/94] gi|254719760|ref|ZP_05181571.1| Ferredoxin-2 [Brucella sp. 83/13] gi|254730961|ref|ZP_05189539.1| Ferredoxin-2 [Brucella abortus bv. 4 str. 292] gi|256030299|ref|ZP_05443913.1| Ferredoxin-2 [Brucella pinnipedialis M292/94/1] gi|256045368|ref|ZP_05448262.1| Ferredoxin-2 [Brucella melitensis bv. 1 str. Rev.1] gi|256114332|ref|ZP_05455070.1| Ferredoxin-2 [Brucella melitensis bv. 3 str. Ether] gi|256160472|ref|ZP_05458161.1| Ferredoxin-2 [Brucella ceti M490/95/1] gi|256255679|ref|ZP_05461215.1| Ferredoxin-2 [Brucella ceti B1/94] gi|256258181|ref|ZP_05463717.1| Ferredoxin-2 [Brucella abortus bv. 9 str. C68] gi|256263294|ref|ZP_05465826.1| 7Fe ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|256370173|ref|YP_003107684.1| ferredoxin A [Brucella microti CCM 4915] gi|260167973|ref|ZP_05754784.1| ferredoxin A [Brucella sp. F5/99] gi|260547125|ref|ZP_05822863.1| 7Fe ferredoxin [Brucella abortus NCTC 8038] gi|260565738|ref|ZP_05836221.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|260568844|ref|ZP_05839312.1| ferredoxin II [Brucella suis bv. 4 str. 40] gi|260755461|ref|ZP_05867809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758683|ref|ZP_05871031.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260762518|ref|ZP_05874855.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884479|ref|ZP_05896093.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261214732|ref|ZP_05929013.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261222885|ref|ZP_05937166.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti B1/94] gi|261315873|ref|ZP_05955070.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261316266|ref|ZP_05955463.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis B2/94] gi|261750917|ref|ZP_05994626.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 5 str. 513] gi|261754171|ref|ZP_05997880.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 3 str. 686] gi|261757415|ref|ZP_06001124.1| 7Fe ferredoxin [Brucella sp. F5/99] gi|265984779|ref|ZP_06097514.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella sp. 83/13] gi|265987330|ref|ZP_06099887.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265991796|ref|ZP_06104353.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995636|ref|ZP_06108193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265998844|ref|ZP_06111401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M490/95/1] gi|294851011|ref|ZP_06791687.1| ferredoxin [Brucella sp. NVSL 07-0026] gi|297249031|ref|ZP_06932739.1| ferredoxin-2 [Brucella abortus bv. 5 str. B3196] gi|306839456|ref|ZP_07472264.1| Ferredoxin-2 [Brucella sp. NF 2653] gi|306841481|ref|ZP_07474181.1| Ferredoxin-2 [Brucella sp. BO2] gi|306844752|ref|ZP_07477337.1| Ferredoxin-2 [Brucella sp. BO1] gi|17982169|gb|AAL51459.1| ferredoxin ii [Brucella melitensis bv. 1 str. 16M] gi|23348629|gb|AAN30666.1| ferredoxin A [Brucella suis 1330] gi|62196769|gb|AAX75069.1| FdxA, ferredoxin A [Brucella abortus bv. 1 str. 9-941] gi|82616652|emb|CAJ11734.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Brucella melitensis biovar Abortus 2308] gi|148370453|gb|ABQ60432.1| ferredoxin A [Brucella ovis ATCC 25840] gi|161336503|gb|ABX62808.1| Ferredoxin-2 [Brucella canis ATCC 23365] gi|163676067|gb|ABY40177.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189020421|gb|ACD73143.1| 7Fe ferredoxin [Brucella abortus S19] gi|225641582|gb|ACO01496.1| Ferredoxin-2 [Brucella melitensis ATCC 23457] gi|237788600|gb|EEP62813.1| Ferredoxin-2 [Brucella abortus str. 2308 A] gi|256000336|gb|ACU48735.1| ferredoxin A [Brucella microti CCM 4915] gi|260095490|gb|EEW79368.1| 7Fe ferredoxin [Brucella abortus NCTC 8038] gi|260151111|gb|EEW86206.1| ferredoxin II [Brucella melitensis bv. 1 str. 16M] gi|260154228|gb|EEW89310.1| ferredoxin II [Brucella suis bv. 4 str. 40] gi|260669001|gb|EEX55941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672944|gb|EEX59765.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675569|gb|EEX62390.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260874007|gb|EEX81076.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260916339|gb|EEX83200.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260921469|gb|EEX88122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti B1/94] gi|261295489|gb|EEX98985.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis B2/94] gi|261304899|gb|EEY08396.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261737399|gb|EEY25395.1| 7Fe ferredoxin [Brucella sp. F5/99] gi|261740670|gb|EEY28596.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 5 str. 513] gi|261743924|gb|EEY31850.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella suis bv. 3 str. 686] gi|262553533|gb|EEZ09302.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M490/95/1] gi|262766920|gb|EEZ12538.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002752|gb|EEZ15155.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093261|gb|EEZ17358.1| 7Fe ferredoxin [Brucella melitensis bv. 2 str. 63/9] gi|264659527|gb|EEZ29788.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella pinnipedialis M292/94/1] gi|264663371|gb|EEZ33632.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella sp. 83/13] gi|294821654|gb|EFG38650.1| ferredoxin [Brucella sp. NVSL 07-0026] gi|297174164|gb|EFH33521.1| ferredoxin-2 [Brucella abortus bv. 5 str. B3196] gi|306274924|gb|EFM56694.1| Ferredoxin-2 [Brucella sp. BO1] gi|306288445|gb|EFM59801.1| Ferredoxin-2 [Brucella sp. BO2] gi|306405401|gb|EFM61672.1| Ferredoxin-2 [Brucella sp. NF 2653] gi|326409774|gb|ADZ66839.1| 7Fe ferredoxin [Brucella melitensis M28] gi|326539491|gb|ADZ87706.1| ferredoxin-2 [Brucella melitensis M5-90] Length = 112 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++LP A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALPEAKEMDGVAGKLEQYFSPEAGSGD 112 >gi|319407755|emb|CBI81402.1| ferredoxin II [Bartonella sp. 1-1C] Length = 112 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 83/111 (74%), Positives = 93/111 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+ TKK+ LP A +MDG+ K EKYFS NPG Sbjct: 61 PGLEKWLELNLRYAKKWPNLMTKKDPLPQAKEMDGIPNKLEKYFSENPGNG 111 >gi|222150213|ref|YP_002551170.1| ferredoxin [Agrobacterium vitis S4] gi|221737195|gb|ACM38158.1| ferredoxin [Agrobacterium vitis S4] Length = 116 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 84/112 (75%), Positives = 99/112 (88%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 5 MTYIVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+E+A WPNITTK+++LP A +MDGV+ K+E YFS PG + Sbjct: 65 PGLDKWLKINAEFAQVWPNITTKRDALPEAKEMDGVEGKFELYFSEKPGTGD 116 >gi|170750106|ref|YP_001756366.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656628|gb|ACB25683.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 112 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 L+ WLK+N++YA WPNIT KKE+ A + DG K E +FSPNPG + Sbjct: 61 SNLDTWLKLNADYAKSWPNITQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD 112 >gi|118591278|ref|ZP_01548676.1| ferredoxin III protein [Stappia aggregata IAM 12614] gi|118435950|gb|EAV42593.1| ferredoxin III protein [Stappia aggregata IAM 12614] Length = 110 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 81/110 (73%), Positives = 95/110 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE W++IN+EY+ +WPNIT KK+ LP A + DG + K+EK+FSPNP Sbjct: 61 PGLEKWIEINAEYSEKWPNITEKKDPLPDAEEFDGKENKFEKFFSPNPAS 110 >gi|319406280|emb|CBI79917.1| ferredoxin II [Bartonella sp. AR 15-3] Length = 112 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 83/111 (74%), Positives = 92/111 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+ TKK+ LP A +MDGV K E YFS NPG Sbjct: 61 PGLEKWLELNLNYANKWPNLMTKKDPLPQAKEMDGVLNKLETYFSENPGSG 111 >gi|316931530|ref|YP_004106512.1| ferredoxin [Rhodopseudomonas palustris DX-1] gi|315599244|gb|ADU41779.1| ferredoxin [Rhodopseudomonas palustris DX-1] Length = 112 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+E+A WPN+T KK++ A + DG K++KYFS PG + Sbjct: 61 PGLEKWLELNAEHAKTWPNLTQKKDAPADAKEFDGQAGKFDKYFSSEPGSGD 112 >gi|319899400|ref|YP_004159497.1| ferredoxin II [Bartonella clarridgeiae 73] gi|319403368|emb|CBI76927.1| ferredoxin II [Bartonella clarridgeiae 73] Length = 112 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 82/111 (73%), Positives = 92/111 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYIVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+ TKK+ LP A +MDGV K EKYFS NPG Sbjct: 61 PGLEKWLELNLNYANKWPNLMTKKDPLPQAKEMDGVPDKLEKYFSENPGSG 111 >gi|115522155|ref|YP_779066.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516102|gb|ABJ04086.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodopseudomonas palustris BisA53] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N+E+A WPNIT KK++ A DG + K++KYFS PG + Sbjct: 61 PGLEQWLSLNAEHAKSWPNITQKKDAPADAKSFDGAEGKFDKYFSAEPGSGD 112 >gi|209883218|ref|YP_002287075.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] gi|209871414|gb|ACI91210.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P LE WL +N+EYA WPNIT KK+ A + DG + K+++YFSPNPG + Sbjct: 61 PDLEKWLGVNAEYAKTWPNITQKKDPPDDAKEFDGAEGKFDQYFSPNPGTGD 112 >gi|121602702|ref|YP_988462.1| ferredoxin [Bartonella bacilliformis KC583] gi|120614879|gb|ABM45480.1| ferredoxin [Bartonella bacilliformis KC583] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 84/110 (76%), Positives = 95/110 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE WL++N YAT+WPN++T+K LP A +MDG+ K EKYFS NPGG Sbjct: 61 PGLEQWLELNLNYATKWPNLSTQKPPLPEAKEMDGIPNKLEKYFSENPGG 110 >gi|91974761|ref|YP_567420.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] gi|91681217|gb|ABE37519.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] Length = 112 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+EYA WPN+T KKE+ A + +G++ K+EK+FSP PG + Sbjct: 61 PGLEKWLELNTEYAKSWPNLTQKKEAPGDAKQYEGMEGKFEKFFSPEPGTGD 112 >gi|85713776|ref|ZP_01044766.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gi|85699680|gb|EAQ37547.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 112 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+EYA WPNIT KKE+ P A + +G + K+EKYFSPNPG + Sbjct: 61 PGLEKWLEVNAEYAKSWPNITQKKEAPPDAKEFEGQEGKFEKYFSPNPGTGD 112 >gi|148258714|ref|YP_001243299.1| ferredoxin II [Bradyrhizobium sp. BTAi1] gi|146410887|gb|ABQ39393.1| ferredoxin II [Bradyrhizobium sp. BTAi1] Length = 112 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 83/112 (74%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N+EYA WPNIT KK+ A + DG K+EKYFSP PG + Sbjct: 61 PGLEKWLGVNAEYAKAWPNITQKKDPPGDAKEHDGEAGKFEKYFSPKPGAGD 112 >gi|254714616|ref|ZP_05176427.1| Ferredoxin-2 [Brucella ceti M644/93/1] gi|254717514|ref|ZP_05179325.1| Ferredoxin-2 [Brucella ceti M13/05/1] gi|261219349|ref|ZP_05933630.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M13/05/1] gi|261322410|ref|ZP_05961607.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M644/93/1] gi|260924438|gb|EEX91006.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M13/05/1] gi|261295100|gb|EEX98596.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brucella ceti M644/93/1] Length = 112 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAISPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KK++L A +MDGV K E+YFSP G + Sbjct: 61 PGLDKWLELNAEYAAKWPNITAKKDALLEAKEMDGVAGKLEQYFSPEAGSGD 112 >gi|254502406|ref|ZP_05114557.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222438477|gb|EEE45156.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 110 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 82/108 (75%), Positives = 94/108 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 PGLE W++IN+EY+ +WPNIT KK+ +P A K DG + K EKYFSPNP Sbjct: 61 PGLEKWIEINAEYSEKWPNITEKKDPMPDADKFDGQENKLEKYFSPNP 108 >gi|92116127|ref|YP_575856.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91799021|gb|ABE61396.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 112 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 78/112 (69%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N++YA WPN+T KK++ P A + +G + K+EKYFSPNPG + Sbjct: 61 PGLEKWLELNADYAKSWPNLTQKKDAPPDAKEFEGQEGKFEKYFSPNPGTGD 112 >gi|298293647|ref|YP_003695586.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Starkeya novella DSM 506] gi|296930158|gb|ADH90967.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Starkeya novella DSM 506] Length = 111 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 92/112 (82%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCV VCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVSVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL +N+EYA WPNIT +K+ LP A + DGV K + Y SP PG ++ Sbjct: 61 PGLDKWLSLNAEYAKVWPNITDRKDPLPDAKEWDGVPDKLQ-YLSPEPGKQD 111 >gi|307943599|ref|ZP_07658943.1| ferredoxin-1 [Roseibium sp. TrichSKD4] gi|307773229|gb|EFO32446.1| ferredoxin-1 [Roseibium sp. TrichSKD4] Length = 114 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 80/107 (74%), Positives = 92/107 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 5 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 PGLE W+++N+EY+ +WPNIT KK+ LP A + DG K K EKYFSPN Sbjct: 65 PGLEKWIELNAEYSEKWPNITEKKDELPEAKEFDGKKDKLEKYFSPN 111 >gi|222087731|ref|YP_002546268.1| ferredoxin III protein [Agrobacterium radiobacter K84] gi|221725179|gb|ACM28335.1| ferredoxin III protein [Agrobacterium radiobacter K84] Length = 116 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 83/112 (74%), Positives = 98/112 (87%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NC+ CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 5 MTYVVTDNCVRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPAEAIKPDTE 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN++YA WPNIT K+++LP A ++DG + K+EKYFS NPG + Sbjct: 65 PGLDKWLKINADYAAIWPNITVKRDALPEAKELDGEEGKFEKYFSANPGAGD 116 >gi|325294121|ref|YP_004279985.1| Ferredoxin [Agrobacterium sp. H13-3] gi|325061974|gb|ADY65665.1| Ferredoxin [Agrobacterium sp. H13-3] Length = 112 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 84/112 (75%), Positives = 95/112 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLK+N+EYA WPNIT K++ LP A +MDGV K E YFS PG + Sbjct: 61 PGLDKWLKLNTEYAAIWPNITIKRDPLPEAKEMDGVTGKLELYFSAEPGKGD 112 >gi|299132817|ref|ZP_07026012.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298592954|gb|EFI53154.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 112 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WL +N+EYA WPNIT KK++ A + DG + K++ YFSPNPG + Sbjct: 61 ADLEKWLGVNAEYAKTWPNITQKKDAPADAKEFDGAEGKFDNYFSPNPGTGD 112 >gi|90422071|ref|YP_530441.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] gi|90104085|gb|ABD86122.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] Length = 112 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 78/112 (69%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CK+TDCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTEACIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+EY+ WPNIT KK++ A + + V+ K++KYFS PG + Sbjct: 61 PGLEKWLEVNAEYSKTWPNITQKKDAPADAKEFESVEGKFDKYFSAEPGTGD 112 >gi|315122140|ref|YP_004062629.1| putative ferredoxin protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495542|gb|ADR52141.1| putative ferredoxin protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 112 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 93/110 (84%), Positives = 103/110 (93%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCILCKHTDCVEVCPVDCFYEGENFL IHP+ECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTFVVTENCILCKHTDCVEVCPVDCFYEGENFLVIHPEECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 PGLE+WL+INS+Y++QWPNITTKK SLP+AA+MDGV+ KYE YFSP P Sbjct: 61 PGLEMWLQINSKYSSQWPNITTKKASLPNAAEMDGVENKYENYFSPKPAK 110 >gi|294678312|ref|YP_003578927.1| ferredoxin II [Rhodobacter capsulatus SB 1003] gi|119953|sp|P18082|FER2_RHOCA RecName: Full=Ferredoxin-2; AltName: Full=Ferredoxin II; Short=FdII gi|46012|emb|CAA37388.1| unnamed protein product [Rhodobacter capsulatus] gi|151914|gb|AAA26108.1| ferredoxin II [Rhodobacter capsulatus SB 1003] gi|294477132|gb|ADE86520.1| ferredoxin II [Rhodobacter capsulatus SB 1003] Length = 112 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E W++ N YA+QWP IT KK+ +P K DG K EKYFSPNPG + Sbjct: 61 PGMEDWVEFNRTYASQWPVITIKKDPMPDHKKYDGETGKREKYFSPNPGTGD 112 >gi|75676994|ref|YP_319415.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gi|74421864|gb|ABA06063.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 112 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P LE WLK+N+EY+ WPNIT K+++ A DGV K E+YFS NPG + Sbjct: 61 PDLENWLKLNAEYSAVWPNITIKRDAPADAKTFDGVAGKLEQYFSANPGQGD 112 >gi|85714492|ref|ZP_01045480.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] gi|85698939|gb|EAQ36808.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter sp. Nb-311A] Length = 112 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 77/112 (68%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG+N L I+PDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTFVVTENCIKCKYMDCVEVCPVDCFYEGDNMLVINPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P LE WLK+N+EYA WPNIT K+++ A DGV K E+YFS NPG + Sbjct: 61 PDLENWLKLNAEYAAVWPNITIKRDAPADAKTFDGVAGKLEQYFSANPGQGD 112 >gi|323138997|ref|ZP_08074057.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylocystis sp. ATCC 49242] gi|322395751|gb|EFX98292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylocystis sp. ATCC 49242] Length = 112 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WLK+N++ A WPNIT K+E A + DG K+E +FS PG + Sbjct: 61 ENLEQWLKLNADMAQNWPNITIKREPPADAKEWDGKPGKFEAHFSAEPGQGD 112 >gi|328542019|ref|YP_004302128.1| Ferredoxin II [polymorphum gilvum SL003B-26A1] gi|326411769|gb|ADZ68832.1| Ferredoxin II [Polymorphum gilvum SL003B-26A1] Length = 112 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 81/107 (75%), Positives = 93/107 (86%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 PGLE W++IN+EYA +WPNIT KK+ LP AA+ DG K+E+YFSPN Sbjct: 61 PGLEKWIEINAEYAAKWPNITVKKDPLPEAAEFDGKAGKFEQYFSPN 107 >gi|159185361|ref|NP_355681.2| ferredoxin [Agrobacterium tumefaciens str. C58] gi|159140612|gb|AAK88466.2| ferredoxin [Agrobacterium tumefaciens str. C58] Length = 112 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 84/112 (75%), Positives = 96/112 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYA WPNIT K++ +P A +MDGV+ K E YFS PG + Sbjct: 61 PGLDKWLKINTEYAAIWPNITIKRDPMPEAKEMDGVEGKLELYFSAEPGKGD 112 >gi|297180169|gb|ADI16391.1| ferredoxin [uncultured bacterium HF130_12L15] Length = 112 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+EYA +WPNIT KKE A + DGV+ K+EKYFS G + Sbjct: 61 PGLEKWLQVNTEYADKWPNITAKKEPPADAKEFDGVEGKFEKYFSAEAGEGD 112 >gi|13473302|ref|NP_104869.1| ferredoxin II [Mesorhizobium loti MAFF303099] gi|14024050|dbj|BAB50655.1| ferredoxin II [Mesorhizobium loti MAFF303099] Length = 112 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL+IN+EYA +WPNIT KKE A DG K+EKYFS PG + Sbjct: 61 PGLDKWLQINTEYAEKWPNITAKKEPPADAKTFDGEAGKFEKYFSAEPGEGD 112 >gi|154252147|ref|YP_001412971.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156097|gb|ABS63314.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Parvibaculum lavamentivorans DS-1] Length = 112 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYIVTDACIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL++N+EYA++WPNIT K++ A GV K+E++FS PG + Sbjct: 61 PGLEKWLELNTEYASKWPNITIKRDPPADADDWQGVSGKFEEHFSAEPGEGD 112 >gi|319404795|emb|CBI78396.1| ferredoxin II [Bartonella rochalimae ATCC BAA-1498] Length = 112 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 82/111 (73%), Positives = 92/111 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIQCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 PGLE WL++N YA +WPN+ TKK+ LP A +MDG+ K EK FS NPG Sbjct: 61 PGLEKWLELNLRYAKKWPNLMTKKDPLPQAKEMDGIPNKLEKCFSENPGNG 111 >gi|148556440|ref|YP_001264022.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphingomonas wittichii RW1] gi|148501630|gb|ABQ69884.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sphingomonas wittichii RW1] Length = 112 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++N+ +A QWPNIT K+E+ A + V+ KYEK+FSP PG + Sbjct: 61 SGLEQWLELNNTFAAQWPNITRKREAPADADEWKNVEGKYEKHFSPEPGQGD 112 >gi|260434065|ref|ZP_05788036.1| ferredoxin-1 [Silicibacter lacuscaerulensis ITI-1157] gi|260417893|gb|EEX11152.1| ferredoxin-1 [Silicibacter lacuscaerulensis ITI-1157] Length = 112 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E W++ N +YA WP I +KK+ LP A K DG + K EKYFS PG Sbjct: 61 PGMEQWVEFNRKYAEIWPVIVSKKDPLPDAEKHDGEEGKMEKYFSEAPGEGG 112 >gi|119384563|ref|YP_915619.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Paracoccus denitrificans PD1222] gi|119374330|gb|ABL69923.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Paracoccus denitrificans PD1222] Length = 112 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 77/112 (68%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI+CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIMCKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP IT KK+ +P +MDG K EKYFS PG + Sbjct: 61 PDMDKWVEFNRKYAESWPVITRKKDPMPGYQEMDGAPGKLEKYFSEAPGEGD 112 >gi|319781059|ref|YP_004140535.1| ferredoxin II [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166947|gb|ADV10485.1| ferredoxin II [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 112 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WL++N+EYA +WPNIT KKE A DG K+EKYFS PG + Sbjct: 61 PGLDKWLQVNTEYAEKWPNITAKKEPPADAKSFDGEAGKFEKYFSAEPGEGD 112 >gi|114706527|ref|ZP_01439428.1| ferredoxin II [Fulvimarina pelagi HTCC2506] gi|114537919|gb|EAU41042.1| ferredoxin II [Fulvimarina pelagi HTCC2506] Length = 112 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 82/112 (73%), Positives = 92/112 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYLVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLKIN+EYA +WPNIT KE A K DG + K+EKYFS PG + Sbjct: 61 PGLDHWLKINTEYAEKWPNITIAKEKPEDAEKYDGEEGKFEKYFSAEPGSGD 112 >gi|260461458|ref|ZP_05809705.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] gi|259032528|gb|EEW33792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] Length = 112 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DC+EVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTDNCIKCKYMDCIEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL+ WL+IN+EYA +WPNIT KKE A DG K+EKYFS PG + Sbjct: 61 SGLDKWLQINTEYAEKWPNITAKKEPPADAKTFDGEAGKFEKYFSAEPGEGD 112 >gi|300024664|ref|YP_003757275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526485|gb|ADJ24954.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 112 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV E CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVNEKCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E WL++N +YA WPNIT KK +LP A + K+EKYFSPN G + Sbjct: 61 PGMERWLELNRQYADNWPNITAKKAALPDADDIKDEPGKFEKYFSPNAGSGD 112 >gi|159043337|ref|YP_001532131.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911097|gb|ABV92530.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dinoroseobacter shibae DFL 12] Length = 112 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 77/112 (68%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEAWPVIITKKDQLPDAEERDGEQGKLEKYFSEAPGEGG 112 >gi|75674609|ref|YP_317030.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter winogradskyi Nb-255] gi|74419479|gb|ABA03678.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter winogradskyi Nb-255] Length = 112 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 94/112 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD+E Sbjct: 1 MTYVVNDACIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E WL++N+EYA +WPNIT KKE+ P A +G + K+EKYFSP+PG + Sbjct: 61 PGVEKWLEVNAEYAGRWPNITQKKETPPDAKDFEGQEGKFEKYFSPDPGTGD 112 >gi|149916594|ref|ZP_01905108.1| ferredoxin II [Roseobacter sp. AzwK-3b] gi|149809521|gb|EDM69381.1| ferredoxin II [Roseobacter sp. AzwK-3b] Length = 112 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ +P A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQMPDAEERDGEEGKLEKYFSEKPGEGG 112 >gi|90420289|ref|ZP_01228197.1| ferredoxin II [Aurantimonas manganoxydans SI85-9A1] gi|90335623|gb|EAS49373.1| ferredoxin II [Aurantimonas manganoxydans SI85-9A1] Length = 112 Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 78/112 (69%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+ DCVEVCPVDCFYEG+N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYLVTDNCIRCKYMDCVEVCPVDCFYEGDNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P L+ WLKIN+EYA +WPNIT K+++ A K DG K+EKYFS PG + Sbjct: 61 PNLDKWLKINTEYAEKWPNITIKRDAPADAEKFDGEDGKFEKYFSAEPGQGD 112 >gi|158421856|ref|YP_001523148.1| ferredoxin II [Azorhizobium caulinodans ORS 571] gi|158328745|dbj|BAF86230.1| ferredoxin II [Azorhizobium caulinodans ORS 571] Length = 111 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 80/112 (71%), Positives = 90/112 (80%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCILCK+TDCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MAYVVTENCILCKYTDCVAVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGLE WL +N+EYA WPNIT K+++LP A + DG K +K FS PG + Sbjct: 61 PGLEKWLSLNAEYAKTWPNITLKRDALPDAKEWDGKPGKEDK-FSAEPGTGD 111 >gi|307294531|ref|ZP_07574373.1| ferredoxin [Sphingobium chlorophenolicum L-1] gi|306879005|gb|EFN10223.1| ferredoxin [Sphingobium chlorophenolicum L-1] Length = 112 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 72/111 (64%), Positives = 90/111 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 GLE WL++N++++ +WPNIT K ++ A M GV+ K+E++FSP PG Sbjct: 61 NGLEKWLELNTKFSAEWPNITVKGDAPADADDMKGVENKFEQFFSPEPGAG 111 >gi|296447998|ref|ZP_06889904.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylosinus trichosporium OB3b] gi|296254508|gb|EFH01629.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylosinus trichosporium OB3b] Length = 112 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 84/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEG N L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MPYVVTENCIKCKYMDCVEVCPVDCFYEGVNMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P LE W+ +N+EYA WPN+T K++ A + DG K E FSP PG + Sbjct: 61 PDLEKWMALNAEYAQVWPNVTIKRDPPADAKEWDGKPGKLESGFSPEPGQGD 112 >gi|163759999|ref|ZP_02167083.1| ferredoxin II [Hoeflea phototrophica DFL-43] gi|162282957|gb|EDQ33244.1| ferredoxin II [Hoeflea phototrophica DFL-43] Length = 112 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 78/112 (69%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E WL +N+EYA +WPNIT K+++ A DG + K+EKYFS PG + Sbjct: 61 PGMEKWLVVNTEYADKWPNITVKRDAPDDAKDFDGTEGKFEKYFSAEPGEGD 112 >gi|154246582|ref|YP_001417540.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160667|gb|ABS67883.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 111 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 85/112 (75%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPD E Sbjct: 1 MTYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL +N+EYA WPNIT K++ A + DG K E+ FSP PG + Sbjct: 61 LGLEKWLALNAEYAKAWPNITLKRDPPADAKEWDGKPGK-EELFSPEPGQGD 111 >gi|254512440|ref|ZP_05124507.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221536151|gb|EEE39139.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 112 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E W++ N +Y+ QWP I TKK+ +P A + DG + K EKYFS PG Sbjct: 61 PGMEEWVEFNRKYSEQWPVIVTKKDPMPDAEERDGEEGKMEKYFSEAPGEGG 112 >gi|163736062|ref|ZP_02143485.1| ferredoxin II [Roseobacter litoralis Och 149] gi|161390658|gb|EDQ15004.1| ferredoxin II [Roseobacter litoralis Och 149] Length = 112 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCISCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A + DG K EKYFS NPG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPGEGG 112 >gi|254475184|ref|ZP_05088570.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214029427|gb|EEB70262.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 112 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I +KK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPLPDAEERDGEEGKLEKYFSEAPGEGG 112 >gi|146277598|ref|YP_001167757.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555839|gb|ABP70452.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 112 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MAYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E WL++N +YA WP I TKK+ LP AA +DG K +FS PG Sbjct: 61 PDMESWLELNRKYAEIWPVIVTKKDPLPEAADLDGQTGKLATHFSEKPGEGG 112 >gi|304394151|ref|ZP_07376074.1| ferredoxin [Ahrensia sp. R2A130] gi|303293591|gb|EFL87968.1| ferredoxin [Ahrensia sp. R2A130] Length = 112 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 81/112 (72%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYLVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PGL+ WLK+N+E+A +WPNI K E A K DG K K+EKYFS PG N Sbjct: 61 PGLDNWLKVNTEFAEKWPNIIAKGEQPGDAEKFDGEKGKFEKYFSAEPGEGN 112 >gi|94497219|ref|ZP_01303791.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] gi|94423324|gb|EAT08353.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sphingomonas sp. SKA58] Length = 112 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 89/112 (79%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++N++Y+ +WPNIT K ++ A M+GV+ K E++FSP PG + Sbjct: 61 NGLEKWLELNTKYSAEWPNITVKGDAPADAEAMNGVENKLEQFFSPEPGKGD 112 >gi|99080416|ref|YP_612570.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036696|gb|ABF63308.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 112 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDQWVEFNRKYAELWPVIVSKKDPMPGHEERDGEEGKLEKYFSEAPGEGG 112 >gi|56696303|ref|YP_166660.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56678040|gb|AAV94706.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 112 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 79/112 (70%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENALVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E W++ N +Y+ WP I TKK+ LP A + DG K EKYFS PG Sbjct: 61 PGMEQWVEFNRKYSEMWPVIVTKKDPLPEAEERDGESGKMEKYFSEAPGEGG 112 >gi|77462982|ref|YP_352486.1| ferredoxin II [Rhodobacter sphaeroides 2.4.1] gi|126461856|ref|YP_001042970.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|221638838|ref|YP_002525100.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides KD131] gi|332557858|ref|ZP_08412180.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides WS8N] gi|77387400|gb|ABA78585.1| ferredoxin II [Rhodobacter sphaeroides 2.4.1] gi|126103520|gb|ABN76198.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17029] gi|221159619|gb|ACM00599.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides KD131] gi|332275570|gb|EGJ20885.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides WS8N] Length = 112 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W+++N +YA WP I TKK+ LP A +DG K +FS PG Sbjct: 61 PDMESWVELNRKYAEVWPVIVTKKDPLPEATDLDGQPGKLATHFSEKPGEGG 112 >gi|294012720|ref|YP_003546180.1| ferredoxin [Sphingobium japonicum UT26S] gi|292676050|dbj|BAI97568.1| ferredoxin [Sphingobium japonicum UT26S] Length = 112 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 72/111 (64%), Positives = 90/111 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDNCIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 GLE WL++N++++ +WPNIT K E+ A M G++ K+E++FSP PG Sbjct: 61 NGLEKWLELNTKFSAEWPNITVKGEAPADADDMKGIENKFEQFFSPEPGAG 111 >gi|110679119|ref|YP_682126.1| ferredoxin II [Roseobacter denitrificans OCh 114] gi|109455235|gb|ABG31440.1| ferredoxin II [Roseobacter denitrificans OCh 114] Length = 112 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A + DG K EKYFS NPG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPTAEERDGETGKLEKYFSENPGEGG 112 >gi|163738512|ref|ZP_02145927.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] gi|163743577|ref|ZP_02150954.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161383162|gb|EDQ07554.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161388433|gb|EDQ12787.1| ferredoxin-2 [Phaeobacter gallaeciensis BS107] Length = 112 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I +KK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPLPEAEERDGEEGKLEKYFSEAPGEGG 112 >gi|217977550|ref|YP_002361697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylocella silvestris BL2] gi|217502926|gb|ACK50335.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylocella silvestris BL2] Length = 112 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV ENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVLENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 PG+E W+ +N++ A WPNIT K+E+ P A + DG K++++FSP PG + Sbjct: 61 PGIEQWITLNADMAQSWPNITMKREAAPDAKQFDGRPGKFKEFFSPEPGKGD 112 >gi|259417758|ref|ZP_05741677.1| ferredoxin-1 [Silicibacter sp. TrichCH4B] gi|259346664|gb|EEW58478.1| ferredoxin-1 [Silicibacter sp. TrichCH4B] Length = 112 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDQWVEFNRKYAELWPVIVSKKDPMPGYEERDGEEGKLEKYFSEAPGEGG 112 >gi|85709784|ref|ZP_01040849.1| ferredoxin II [Erythrobacter sp. NAP1] gi|85688494|gb|EAQ28498.1| ferredoxin II [Erythrobacter sp. NAP1] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 71/112 (63%), Positives = 90/112 (80%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTEDCIKCKYTDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++N++++ +WPNIT++K+ A + G + K+EKYFS PG + Sbjct: 61 DGLEKWLELNTKFSAEWPNITSQKDPPADADEHKGEENKFEKYFSAEPGEGD 112 >gi|114764921|ref|ZP_01444094.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114542633|gb|EAU45657.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I +KK+ +P A + DG K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIISKKDPMPEAEERDGEPGKMEKYFSEAPGEGG 112 >gi|84500894|ref|ZP_00999129.1| iron-sulfur cluster-binding protein [Oceanicola batsensis HTCC2597] gi|84390961|gb|EAQ03379.1| iron-sulfur cluster-binding protein [Oceanicola batsensis HTCC2597] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 85/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P E W++ N +Y+ WP I T+K+ LP A + DG K EKYFS PG Sbjct: 61 PDTEKWVEFNRKYSEMWPVIITRKDPLPEAEERDGETGKLEKYFSEKPGEGG 112 >gi|87198149|ref|YP_495406.1| 4Fe-4S ferredoxin, iron-sulfur binding [Novosphingobium aromaticivorans DSM 12444] gi|87133830|gb|ABD24572.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 71/112 (63%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++N++Y+ +WPNIT KK++ A + G + K++KYFS PG + Sbjct: 61 SGLEQWLELNAKYSAEWPNITAKKDAPADADEHKGEEGKFDKYFSAEPGEGD 112 >gi|103488218|ref|YP_617779.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] gi|98978295|gb|ABF54446.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sphingopyxis alaskensis RB2256] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 91/112 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACVRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++NS+++ +WPNIT KKE+ A + GV+ K+EK+FSP PG + Sbjct: 61 SGLEKWLEVNSKFSAEWPNITVKKETPADADEYKGVEGKFEKFFSPEPGEGD 112 >gi|86137858|ref|ZP_01056434.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85825450|gb|EAQ45649.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 112 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I +KK+ +P A + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPMPEAEERDGEEGKLEKYFSEAPGEGG 112 >gi|85375452|ref|YP_459514.1| ferredoxin II [Erythrobacter litoralis HTCC2594] gi|84788535|gb|ABC64717.1| ferredoxin II [Erythrobacter litoralis HTCC2594] Length = 112 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEG+N L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGDNMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL+IN++++ WPNIT KKE A + G + KYEKYFS PG + Sbjct: 61 DGLEKWLEINTKFSADWPNITQKKEPPADADEHKGEEDKYEKYFSAEPGEGD 112 >gi|254459551|ref|ZP_05072967.1| ferredoxin II [Rhodobacterales bacterium HTCC2083] gi|206676140|gb|EDZ40627.1| ferredoxin II [Rhodobacteraceae bacterium HTCC2083] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQLPDAEERDGEEGKLEKYFSEKPGEGG 112 >gi|83955683|ref|ZP_00964263.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] gi|83839977|gb|EAP79153.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A K DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEKRDGEEGKLEKYFSEAPGEGG 112 >gi|254466025|ref|ZP_05079436.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodobacterales bacterium Y4I] gi|206686933|gb|EDZ47415.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodobacterales bacterium Y4I] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP I +KK+ LP + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYAELWPVIVSKKDPLPGYEERDGEEGKMEKYFSEAPGEGG 112 >gi|260753231|ref|YP_003226124.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552594|gb|ACV75540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE W+++N +YA +WPNIT K + A +M V K EK+FSP PG + Sbjct: 61 NGLESWMELNRKYAEEWPNITHKTDVPGDADEMREVTGKLEKFFSPKPGNGD 112 >gi|254486267|ref|ZP_05099472.1| ferredoxin II [Roseobacter sp. GAI101] gi|214043136|gb|EEB83774.1| ferredoxin II [Roseobacter sp. GAI101] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEERDGEEGKLEKYFSEAPGEGG 112 >gi|326386141|ref|ZP_08207765.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209366|gb|EGD60159.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 71/112 (63%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE CI CK DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTEACIKCKFMDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE WL++N++Y+ +WPN+T KK++ A + G + K++KYFS PG + Sbjct: 61 SGLEQWLELNAKYSAEWPNLTAKKDAPADADEHKGEEGKFDKYFSAEPGEGD 112 >gi|83308697|emb|CAJ01607.1| ferredoxin ii [Methylocapsa acidiphila] Length = 112 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV ENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVVENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL+ WL++N + A WPN+T K+E++P A DG K++++FS PG + Sbjct: 61 RGLDKWLELNRDMAKAWPNVTVKREAMPDAKAFDGRPGKFDEFFSAEPGSGD 112 >gi|296284816|ref|ZP_06862814.1| ferredoxin II [Citromicrobium bathyomarinum JL354] Length = 112 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 70/112 (62%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WL++N++++ +WPNIT KK+ A + G + K+EK+F+P PG + Sbjct: 61 DNLEKWLELNTKFSNEWPNITQKKDPPEDADEHKGEEGKFEKFFNPEPGEGD 112 >gi|56551116|ref|YP_161955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241761474|ref|ZP_04759562.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56542690|gb|AAV88844.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241374381|gb|EER63878.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 112 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+ DCVEVCPVDCFYEGEN L I+P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE W+++N +YA +WPNIT K + A +M V K EK+FSP PG + Sbjct: 61 NGLESWMELNRKYAEEWPNITHKTDVPADADEMREVTGKLEKFFSPKPGNGD 112 >gi|126738719|ref|ZP_01754415.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126719900|gb|EBA16607.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 112 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I +KK+ +P + DG + K EKYFS PG Sbjct: 61 PDMDKWVEFNRKYSEMWPVIVSKKDPMPGYEEKDGEEGKLEKYFSEAPGEGG 112 >gi|126729324|ref|ZP_01745138.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126710314|gb|EBA09366.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 112 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVIDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ +WP I TKK+ LP A + DG K KYFS PG Sbjct: 61 PDMEKWVEFNRKYSEEWPVIITKKDPLPEAEERDGETDKVTKYFSEKPGEGG 112 >gi|83941124|ref|ZP_00953586.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] gi|83846944|gb|EAP84819.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] Length = 112 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A + DG + K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPEAEERDGEEGKLEKYFSEAPGEGG 112 >gi|312112940|ref|YP_004010536.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Rhodomicrobium vannielii ATCC 17100] gi|311218069|gb|ADP69437.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rhodomicrobium vannielii ATCC 17100] Length = 114 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 79/113 (69%), Positives = 88/113 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK TDCVEVCPVDCFYEG N L I PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYVVLDACIKCKFTDCVEVCPVDCFYEGANMLVISPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 PGLE +L++N EYA WPNIT KK LP K +K+EKYFSP+PG ++ Sbjct: 61 PGLEKFLEVNREYAALWPNITVKKPPLPDYEKFQQEAEKFEKYFSPDPGEGDS 113 >gi|260426157|ref|ZP_05780136.1| ferredoxin [Citreicella sp. SE45] gi|260420649|gb|EEX13900.1| ferredoxin [Citreicella sp. SE45] Length = 112 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 85/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP I +KKE +P DG K +KYFS PG Sbjct: 61 PDMDKWVEFNRKYAEMWPVIISKKEPMPGYEDRDGEPGKLDKYFSEAPGEGG 112 >gi|149202303|ref|ZP_01879276.1| iron-sulfur cluster-binding protein [Roseovarius sp. TM1035] gi|149144401|gb|EDM32432.1| iron-sulfur cluster-binding protein [Roseovarius sp. TM1035] Length = 112 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 75/112 (66%), Positives = 85/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +YA WP I TKK+ LP A + DG K EKYFS PG Sbjct: 61 PDMEKWVEFNRKYAEMWPVIITKKDPLPEAEERDGEAGKLEKYFSEAPGLGG 112 >gi|149185281|ref|ZP_01863598.1| ferredoxin II [Erythrobacter sp. SD-21] gi|148831392|gb|EDL49826.1| ferredoxin II [Erythrobacter sp. SD-21] Length = 112 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 69/112 (61%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYVVTDACIKCKYTDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 LE WL++N++++ +WPNIT++KE A + G + K++K+FS PG + Sbjct: 61 DNLEKWLELNTKFSAEWPNITSQKEPPADADEHKGEEGKFDKFFSAEPGEGD 112 >gi|288957084|ref|YP_003447425.1| ferredoxin [Azospirillum sp. B510] gi|288909392|dbj|BAI70881.1| ferredoxin [Azospirillum sp. B510] Length = 110 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 72/110 (65%), Positives = 84/110 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MPYVVTDGCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 WL++N +Y+ QWPNIT KK++ A GV K+EK+FSP GG Sbjct: 61 DRATKWLELNRDYSGQWPNITRKKDAPADADTFKGVDGKFEKFFSPKAGG 110 >gi|310815307|ref|YP_003963271.1| iron-sulfur cluster-binding protein [Ketogulonicigenium vulgare Y25] gi|308754042|gb|ADO41971.1| iron-sulfur cluster-binding protein [Ketogulonicigenium vulgare Y25] Length = 111 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 85/112 (75%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVTENCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP IT++++ LP +MDG K S NPG Sbjct: 61 PDMEKWVEFNRKYSEMWPVITSRRDPLPGYEEMDGKPGKL-ALLSENPGLGG 111 >gi|83952972|ref|ZP_00961699.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83835634|gb|EAP74936.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 112 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 86/112 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A + DG + K KYFS G Sbjct: 61 PDMEEWVEFNRKYSEMWPVIITKKDQLPEAEERDGEEGKLAKYFSEKAGEGG 112 >gi|85707560|ref|ZP_01038630.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85667917|gb|EAQ22808.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 112 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 85/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +YA WP I TKK+ LP A + DG K +KYFS PG Sbjct: 61 PDMEKWVEFNRKYAEMWPVIITKKDPLPEAEERDGEAGKLDKYFSEAPGEGG 112 >gi|299134345|ref|ZP_07027538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298591092|gb|EFI51294.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 113 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PD++ Sbjct: 1 MTHVVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFPDSD 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 P E WL+ N +YA+ WPNI KK A K +GVK K+E YFS PG Sbjct: 61 PAAEPKWLEQNKKYASLWPNIPFKKTPPEDADKWNGVKDKFEPYFSEKPGEG 112 >gi|126727501|ref|ZP_01743335.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] gi|126703281|gb|EBA02380.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] Length = 112 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 70/112 (62%), Positives = 88/112 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I T+K+ +AA+M+GV+ K E +FS PG Sbjct: 61 PDMDKWVEFNRKYSELWPVIITRKDPPANAAEMEGVEGKLESHFSEKPGTGG 112 >gi|84687444|ref|ZP_01015322.1| iron-sulfur cluster-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84664602|gb|EAQ11088.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2654] Length = 110 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 74/110 (67%), Positives = 85/110 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDKCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 P E W++ N +Y+ WP I KK+ LP A + DG + K EKYFS PGG Sbjct: 61 PEAEKWVEFNRKYSELWPVIIEKKDPLPEAEERDGEEGKLEKYFSEAPGG 110 >gi|209965507|ref|YP_002298422.1| ferredoxin II [Rhodospirillum centenum SW] gi|209958973|gb|ACI99609.1| ferredoxin II [Rhodospirillum centenum SW] Length = 111 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 72/109 (66%), Positives = 83/109 (76%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MPYVVTELCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E WL++N EY+T WPN+ KK + A + G+ KY K+FSP PG Sbjct: 61 PKAEPWLELNREYSTNWPNLNRKKPAPADADEYKGMPDKYAKFFSPKPG 109 >gi|254441817|ref|ZP_05055310.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] gi|198251895|gb|EDY76210.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] Length = 133 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 87/112 (77%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 23 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 82 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K + FS PG Sbjct: 83 PDMEKWVEFNLKYSEMWPVIITKKDQLPTAEEMDGKEGKLD-LFSEAPGEGG 133 >gi|260576850|ref|ZP_05844833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259020887|gb|EEW24200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 112 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 83/112 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYVVIDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +YA WP I TKK+ LP A DG K YFS PG Sbjct: 61 PDMDTWVEFNRKYAEMWPVIVTKKDMLPDAEARDGETNKLATYFSEKPGLGG 112 >gi|209886244|ref|YP_002290101.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] gi|209874440|gb|ACI94236.1| ferredoxin-1 [Oligotropha carboxidovorans OM5] Length = 113 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENC+ CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI PD++ Sbjct: 1 MTHVVTENCVKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFPDSD 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P E WL+ N +Y+ WPNI KK A K +GV KY++YFS PG Sbjct: 61 PAAEPQWLEQNRKYSAIWPNIPFKKVPPEDADKWNGVPNKYDQYFSEKPG 110 >gi|84515405|ref|ZP_01002767.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] gi|84510688|gb|EAQ07143.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] Length = 111 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 85/112 (75%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP A +MDG K + FS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPGAEEMDGKPGKLD-LFSEAPGEGG 111 >gi|253795562|ref|YP_003038658.1| putative Ferredoxin II [Candidatus Hodgkinia cicadicola Dsem] gi|253739870|gb|ACT34205.1| putative Ferredoxin II [Candidatus Hodgkinia cicadicola Dsem] Length = 160 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 68/104 (65%), Positives = 81/104 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK+TDCVEVCPVDCFYEG+NFL I+PDECIDCGVCEPECP AIK E Sbjct: 50 MAYVVTDNCICCKYTDCVEVCPVDCFYEGKNFLVINPDECIDCGVCEPECPAGAIKSARE 109 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PG+E W ++N+ A WPNI+ +K +P A + +GV K EKYF Sbjct: 110 PGVEKWAELNARCAKLWPNISRRKPPMPKADEFNGVANKLEKYF 153 >gi|83313418|ref|YP_423682.1| ferredoxin II [Magnetospirillum magneticum AMB-1] gi|82948259|dbj|BAE53123.1| Ferredoxin II [Magnetospirillum magneticum AMB-1] Length = 123 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 69/109 (63%), Positives = 77/109 (70%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 15 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSD 74 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P W N +YA WPNIT K ++ A G K K SPNPG Sbjct: 75 PKATAWTDTNRQYAGSWPNITRKGDAPADADDWKGKPDK-AKLLSPNPG 122 >gi|304321708|ref|YP_003855351.1| hypothetical protein PB2503_10789 [Parvularcula bermudensis HTCC2503] gi|303300610|gb|ADM10209.1| hypothetical protein PB2503_10789 [Parvularcula bermudensis HTCC2503] Length = 112 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 76/112 (67%), Positives = 87/112 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK+TDCVEVCPVDCFYEGENFLAI PDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYVVTDACIACKYTDCVEVCPVDCFYEGENFLAIKPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 W ++N++YA QWPNIT K +LP A M V+ K E +FS PG + Sbjct: 61 DPDGKWTELNAKYAEQWPNITKAKPALPEADAMADVENKLETHFSEKPGEGD 112 >gi|83591417|ref|YP_425169.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] gi|83574331|gb|ABC20882.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] Length = 112 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 68/112 (60%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD+E Sbjct: 1 MPYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WL+IN ++A WPNIT K +L A K S NPG Sbjct: 61 AIAGKWLEINRKFADLWPNITRKGPALADADDWKDKPDK-TGLLSENPGKGT 111 >gi|163797038|ref|ZP_02190994.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159177785|gb|EDP62336.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 112 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 84/112 (75%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VTE CI CK+TDCVEVCPVDCFYEG N L IHPDECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYIVTEACIKCKYTDCVEVCPVDCFYEGANMLVIHPDECIDCGVCEPECPPEAILPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 E WL++N EY+ WPNIT K +++P A M K K+E++F PG N Sbjct: 61 TEAEKWLEMNREYSEAWPNITRKIDAMPEADAMQAEKGKFERFFDSGPGQGN 112 >gi|163746985|ref|ZP_02154342.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161380099|gb|EDQ04511.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 111 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 86/112 (76%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E FS PG Sbjct: 61 PDMEKWVEFNRKYSELWPVIITKKDPLPAAEEMDGKEGKME-LFSEKPGEGG 111 >gi|182680040|ref|YP_001834186.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635923|gb|ACB96697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 112 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 68/112 (60%), Positives = 83/112 (74%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YVV ENCI CK+ DCVEVCPVDCFYEGE L I+PDECIDCGVCEPECP +AIKPDT Sbjct: 1 MSYVVLENCIKCKYMDCVEVCPVDCFYEGETMLVINPDECIDCGVCEPECPAEAIKPDTV 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GLE W +N + A WPN+T K+E+ P A + DG K++ +F+ PG + Sbjct: 61 SGLEKWQALNRKMAQYWPNVTVKREAPPEAKQFDGRPGKFDAFFTETPGQGD 112 >gi|329848407|ref|ZP_08263435.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] gi|328843470|gb|EGF93039.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] Length = 112 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 71/111 (63%), Positives = 81/111 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDPCVKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL+IN++YA WPNI+ K + + KYEKYFS PG Sbjct: 61 DEGTKWLEINTKYAAVWPNISEKGTPPADREEYERETGKYEKYFSEKPGDG 111 >gi|118592843|ref|ZP_01550232.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Stappia aggregata IAM 12614] gi|118434613|gb|EAV41265.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Stappia aggregata IAM 12614] Length = 108 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 65/103 (63%), Positives = 81/103 (78%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEGEN L I+PDECIDCGVCEPECP +AI DT+ Sbjct: 1 MTFVVTENCIRCKYTDCVEVCPVDCFYEGENMLVINPDECIDCGVCEPECPAEAILADTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P + W+ +N++YA WP IT K +++P A +GV+ K E+ Sbjct: 61 PEAQKWIDLNAKYAALWPVITEKIDAMPDAEDWNGVEGKLEQL 103 >gi|144899570|emb|CAM76434.1| 4Fe-4S ferredoxin, iron-sulfur binding [Magnetospirillum gryphiswaldense MSR-1] Length = 141 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 66/112 (58%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 30 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIVPDSD 89 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 W ++N +Y+ QWPNIT K ++ A K + SPNPG Sbjct: 90 DKAAAWAQLNRDYSGQWPNITRKGDAPADADAWKNKPDKAD-LLSPNPGKGT 140 >gi|89069369|ref|ZP_01156728.1| iron-sulfur cluster-binding protein [Oceanicola granulosus HTCC2516] gi|89045136|gb|EAR51207.1| iron-sulfur cluster-binding protein [Oceanicola granulosus HTCC2516] Length = 111 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +YA WP I TKK+ LP A +MDG K E FS G Sbjct: 61 PDVEKWVEFNRKYAEIWPVIITKKDPLPKAEEMDGKSGKLE-LFSEAAGEGG 111 >gi|330504210|ref|YP_004381079.1| ferredoxin I [Pseudomonas mendocina NK-01] gi|328918496|gb|AEB59327.1| ferredoxin I [Pseudomonas mendocina NK-01] Length = 107 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++++N++ A WPNIT KK++LP A + DGVK K + Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALPDAEEWDGVKDKLQHL 105 >gi|226945907|ref|YP_002800980.1| ferredoxin I [Azotobacter vinelandii DJ] gi|119918|sp|P00214|FER1_AZOVI RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|142304|gb|AAA22125.1| ferredoxin I [Azotobacter vinelandii] gi|226720834|gb|ACO80005.1| Ferredoxin I [Azotobacter vinelandii DJ] Length = 107 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 105 >gi|254454463|ref|ZP_05067900.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] gi|198268869|gb|EDY93139.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] Length = 111 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E FS PG Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDQLPNAEEMDGKEDKME-LFSEAPGEGG 111 >gi|16124907|ref|NP_419471.1| ferredoxin A [Caulobacter crescentus CB15] gi|221233628|ref|YP_002516064.1| ferredoxin [Caulobacter crescentus NA1000] gi|10719994|sp|Q45972|FER1_CAUCR RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|497275|gb|AAA85787.1| ferredoxin A [Caulobacter crescentus CB15] gi|13421869|gb|AAK22639.1| ferredoxin A [Caulobacter crescentus CB15] gi|220962800|gb|ACL94156.1| ferredoxin [Caulobacter crescentus NA1000] Length = 113 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDACVRCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + WLKIN++YA WPNIT K E + K+EKYFS PG Sbjct: 61 DEADGKWLKINADYAKVWPNITVKGEPPADREDFERETGKFEKYFSEKPGKG 112 >gi|114799500|ref|YP_762091.1| ferredoxin [Hyphomonas neptunium ATCC 15444] gi|114739674|gb|ABI77799.1| ferredoxin [Hyphomonas neptunium ATCC 15444] Length = 113 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 72/113 (63%), Positives = 81/113 (71%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYIVVDACIRCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WLK+NS+YA WPNIT KE + K EKYF+ NPG + Sbjct: 61 DDPDGKWLKLNSDYAKVWPNITRMKEPPADREEFAQETGKLEKYFTANPGAGD 113 >gi|254293139|ref|YP_003059162.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hirschia baltica ATCC 49814] gi|254041670|gb|ACT58465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hirschia baltica ATCC 49814] Length = 113 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L I P+ECIDCGVCEPECP +AI PDTE Sbjct: 1 MTYIVIDACIKCKYTDCVEVCPVDCFYEGENMLVIDPEECIDCGVCEPECPAEAIVPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WLK+N+EYA +WPNIT +K+ A + VK K +FS PG + Sbjct: 61 DDKDGKWLKLNTEYAAKWPNITVRKDPPEDADEWSQVKDKLGPHFSEKPGTGD 113 >gi|121998437|ref|YP_001003224.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Halorhodospira halophila SL1] gi|121589842|gb|ABM62422.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Halorhodospira halophila SL1] Length = 107 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIYSEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P +E +L++N+E A +WP IT KK+ P A + DG K + Sbjct: 61 LPPSMEHFLELNAELAQKWPLITEKKDPPPDAEEWDGKPDKLQHL 105 >gi|218532108|ref|YP_002422924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|218524411|gb|ACK84996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] Length = 112 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 69/104 (66%), Positives = 81/104 (77%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI CK+TDCVEVCPVDCFY G+ L I+PDECIDCGVCEPECP DAIK DTE Sbjct: 1 MTYVVTDNCIRCKYTDCVEVCPVDCFYVGDTMLVINPDECIDCGVCEPECPADAIKADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PGL+ W+ +N++YA WPNI+ K++ L AA DG K E F Sbjct: 61 PGLDGWIALNAKYAALWPNISEKRDPLHDAAAWDGRPGKLESVF 104 >gi|197104174|ref|YP_002129551.1| ferredoxin A [Phenylobacterium zucineum HLK1] gi|196477594|gb|ACG77122.1| ferredoxin A [Phenylobacterium zucineum HLK1] Length = 113 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVMDPCIKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WLK+NSEY+ WPNIT K A + + K+EKYFS PG Sbjct: 61 DDPDGKWLKVNSEYSRVWPNITVKGTPPADAEQFERESGKFEKYFSEKPGRG 112 >gi|302384120|ref|YP_003819943.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brevundimonas subvibrioides ATCC 15264] gi|302194748|gb|ADL02320.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Brevundimonas subvibrioides ATCC 15264] Length = 133 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DC+EVCPVDCFYEGENFLAI PDECIDCGVCEPECPVDAIKPDTE Sbjct: 21 MTYIVTDACVKCKFMDCIEVCPVDCFYEGENFLAIAPDECIDCGVCEPECPVDAIKPDTE 80 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL+IN++YA WPNIT K + + K+EKYFSP PG Sbjct: 81 DEPDGKWLQINAQYARVWPNITVKGTPPADREQYERETGKFEKYFSPEPGKG 132 >gi|57908873|gb|AAW59366.1| ferredoxin A [Azotobacter salinestris] Length = 107 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KKE+LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKEALPDAEDWDGVKGKLQHL 105 >gi|126733166|ref|ZP_01748913.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126716032|gb|EBA12896.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 111 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 73/112 (65%), Positives = 85/112 (75%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A MDG + K E FS G Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPTADDMDGKEGKME-LFSEAAGEGG 111 >gi|114326978|ref|YP_744135.1| ferredoxin [Granulibacter bethesdensis CGDNIH1] gi|114315152|gb|ABI61212.1| ferredoxin [Granulibacter bethesdensis CGDNIH1] Length = 132 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 66/111 (59%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 23 MAYVVTENCIRCKFMDCVEVCPVDCFYVGENMLVIHPDECIDCGVCEPECPAEAIFPDSD 82 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 W + N YA+ WPNIT K E A + K E FS PG Sbjct: 83 DRATAWAEKNRTYASVWPNITRKGEPPADAEEWKDKPGKAE-LFSTEPGEP 132 >gi|142307|gb|AAA16869.1| fdxA [Azotobacter vinelandii] gi|20455804|gb|AAM22287.1| ferredoxin A [Azotobacter vinelandii] Length = 107 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEP CP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPRCPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 105 >gi|311693936|gb|ADP96809.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [marine bacterium HP15] Length = 119 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 13 MAFIVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 72 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N++ A +WPNIT KK+ LP A + DG K + Sbjct: 73 LPADQVQFVELNADLAAKWPNITEKKDPLPDAEEWDGKPNKLQ 115 >gi|255263563|ref|ZP_05342905.1| ferredoxin-1 [Thalassiobium sp. R2A62] gi|255105898|gb|EET48572.1| ferredoxin-1 [Thalassiobium sp. R2A62] Length = 111 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 86/112 (76%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ++CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDSCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P +E W++ N +Y+ WP I TKK+ LP+A +MDG + K E FS G Sbjct: 61 PDMEKWVEFNRKYSEMWPVIITKKDPLPNADEMDGKEGKME-LFSEVAGEGG 111 >gi|49089178|gb|AAT51652.1| PA3621 [synthetic construct] Length = 108 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHL 105 >gi|126726969|ref|ZP_01742807.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] gi|126703641|gb|EBA02736.1| ferredoxin II [Rhodobacterales bacterium HTCC2150] Length = 111 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 71/111 (63%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCV VCPVDCFYEGEN L IHPDECIDCGVCEPECP DAIKPDTE Sbjct: 1 MTYVVTENCIKCKYTDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 G E WLK+N+E A QWP I + + A + G + K+ + S P + Sbjct: 61 SGHETWLKLNAELAEQWPVIDEQIDPPADADQWLGKQNKWTEL-SREPAAR 110 >gi|329849717|ref|ZP_08264563.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] gi|328841628|gb|EGF91198.1| ferredoxin-2 [Asticcacaulis biprosthecum C19] Length = 112 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 76/112 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ CI CK DCV+VCPVDCFYEGENFL I P CIDCG+C PECPVDAIKP+ + Sbjct: 1 MTYVVTDPCIKCKFMDCVDVCPVDCFYEGENFLVIDPAVCIDCGICVPECPVDAIKPEDK 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WL IN+++ WPNIT K +A + K+EKYFS PG + Sbjct: 61 DTDGKWLAINTQFTAVWPNITRKGTPPADSADFERETGKFEKYFSERPGTGD 112 >gi|107103135|ref|ZP_01367053.1| hypothetical protein PaerPA_01004204 [Pseudomonas aeruginosa PACS2] gi|218890154|ref|YP_002439018.1| ferredoxin I [Pseudomonas aeruginosa LESB58] gi|254236536|ref|ZP_04929859.1| ferredoxin I [Pseudomonas aeruginosa C3719] gi|254242319|ref|ZP_04935641.1| ferredoxin I [Pseudomonas aeruginosa 2192] gi|126168467|gb|EAZ53978.1| ferredoxin I [Pseudomonas aeruginosa C3719] gi|126195697|gb|EAZ59760.1| ferredoxin I [Pseudomonas aeruginosa 2192] gi|218770377|emb|CAW26142.1| ferredoxin I [Pseudomonas aeruginosa LESB58] Length = 107 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEIWPNITEKKDALPDAEEWDGVAGKLQHL 105 >gi|15598817|ref|NP_252311.1| ferredoxin I [Pseudomonas aeruginosa PAO1] gi|116051618|ref|YP_789543.1| ferredoxin I [Pseudomonas aeruginosa UCBPP-PA14] gi|152985024|ref|YP_001346902.1| ferredoxin I [Pseudomonas aeruginosa PA7] gi|296387875|ref|ZP_06877350.1| ferredoxin I [Pseudomonas aeruginosa PAb1] gi|313108980|ref|ZP_07794955.1| ferredoxin I [Pseudomonas aeruginosa 39016] gi|81783634|sp|Q9HY07|FER1_PSEAE RecName: Full=Ferredoxin 1 gi|9949779|gb|AAG07009.1|AE004782_7 ferredoxin I [Pseudomonas aeruginosa PAO1] gi|115586839|gb|ABJ12854.1| ferredoxin I [Pseudomonas aeruginosa UCBPP-PA14] gi|150960182|gb|ABR82207.1| ferredoxin I [Pseudomonas aeruginosa PA7] gi|310881457|gb|EFQ40051.1| ferredoxin I [Pseudomonas aeruginosa 39016] Length = 107 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHL 105 >gi|312795504|ref|YP_004028426.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] gi|312167279|emb|CBW74282.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 131 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 25 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 84 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++++N+E A WP+IT K LP A + VK K + Sbjct: 85 VPGDQQQFIQLNAELAKDWPSITRTKPPLPDAVEWKDVKDKLKLL 129 >gi|307546338|ref|YP_003898817.1| ferredoxin [Halomonas elongata DSM 2581] gi|307218362|emb|CBV43632.1| K05524 ferredoxin [Halomonas elongata DSM 2581] Length = 107 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E +++IN+E + WPNIT KK+ A + DG K E Sbjct: 61 LPEGQEQFIEINAELSETWPNITEKKDPPEDAEEWDGKTGKLEHL 105 >gi|23014750|ref|ZP_00054551.1| COG1146: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 67/109 (61%), Positives = 78/109 (71%), Gaps = 1/109 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 P W N +Y+++WPNIT K ++ A G K K SP PG Sbjct: 61 PAAAAWTDTNRQYSSEWPNITRKGDAPADADDWKGKPDK-AKLLSPKPG 108 >gi|238027280|ref|YP_002911511.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia glumae BGR1] gi|237876474|gb|ACR28807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia glumae BGR1] Length = 111 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTENCI CKHTDCV+VCPVDCF+EGENFLAI PDECIDCGVCEPECPVDAI+ D+ Sbjct: 1 MTYVVTENCIQCKHTDCVDVCPVDCFHEGENFLAIDPDECIDCGVCEPECPVDAIRQDSA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P ++L +N E A WP+IT+K+ +LP AA+ V+ K E Sbjct: 61 LAPEQRIFLDLNRELAQNWPSITSKRAALPDAARWKDVEGKLEHL 105 >gi|92112753|ref|YP_572681.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91795843|gb|ABE57982.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 107 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++++N+E + WPNI+ KK+ LP A + DG K + Sbjct: 61 LPDDQKAFIELNAELSEVWPNISEKKDPLPDAEEWDGKTDKLQHL 105 >gi|295691060|ref|YP_003594753.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432963|gb|ADG12135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caulobacter segnis ATCC 21756] Length = 113 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 70/112 (62%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDACVRCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL++N++YA WPNIT K + + K+EKYFS PG Sbjct: 61 DEPDGKWLRVNADYAKVWPNITVKGVPPEDREQFERETGKFEKYFSEKPGKG 112 >gi|198283633|ref|YP_002219954.1| hypothetical protein Lferr_1523 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666844|ref|YP_002426259.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248154|gb|ACH83747.1| Protein of unknown function DUF1971 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519057|gb|ACK79643.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 206 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/101 (58%), Positives = 73/101 (72%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CILCK+TDCV VCPVDCF+EG NFLAI PDECIDC +C ECPVDAI D + Sbjct: 1 MTHVVTEACILCKYTDCVTVCPVDCFHEGPNFLAIDPDECIDCTLCVSECPVDAIFRDVD 60 Query: 61 P--GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G+E + ++N+ A +WP I KK +LP A + V+ K Sbjct: 61 LPNGMEEYPELNARLARRWPVIIQKKPALPDAEQWRHVRDK 101 >gi|146281878|ref|YP_001172031.1| ferredoxin I [Pseudomonas stutzeri A1501] gi|147744561|sp|P08811|FER_PSEST RecName: Full=Ferredoxin 1 gi|145570083|gb|ABP79189.1| ferredoxin I [Pseudomonas stutzeri A1501] gi|327480121|gb|AEA83431.1| ferredoxin I [Pseudomonas stutzeri DSM 4166] Length = 107 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++L A + DGVK K + Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ 103 >gi|89055800|ref|YP_511251.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88865349|gb|ABD56226.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 111 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 71/112 (63%), Positives = 83/112 (74%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V + CI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP DAI+PDTE Sbjct: 1 MTYIVNDACIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P ++ W++ N +Y+ WP I TKK+ LP+A MDG K E FS G Sbjct: 61 PDMDKWVEFNRKYSEMWPVIITKKDPLPTADDMDGKPGKME-LFSEAAGEGG 111 >gi|83859719|ref|ZP_00953239.1| ferredoxin A [Oceanicaulis alexandrii HTCC2633] gi|83852078|gb|EAP89932.1| ferredoxin A [Oceanicaulis alexandrii HTCC2633] Length = 111 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 71/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP++AIKPDTE Sbjct: 1 MTYIVTDACIRCKFTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPIEAIKPDTE 60 Query: 61 PGLE-LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + WL +NS+YAT+WPNIT +K+ + + + K EKYFS P Sbjct: 61 DDADGKWLALNSKYATEWPNITVRKDPPADYKEFETITNKLEKYFSEKPAS 111 >gi|157831121|pdb|1FRH|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 YVVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AYVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|94501247|ref|ZP_01307769.1| ferredoxin [Oceanobacter sp. RED65] gi|94426674|gb|EAT11660.1| ferredoxin [Oceanobacter sp. RED65] Length = 107 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++++N+E A +WPNIT K+ LP A + DGV+ K E Sbjct: 61 LPAGQEKFIELNAELAEEWPNITEMKDKLPDAEEWDGVEGKIEHL 105 >gi|256822660|ref|YP_003146623.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Kangiella koreensis DSM 16069] gi|256796199|gb|ACV26855.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kangiella koreensis DSM 16069] Length = 107 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + Sbjct: 1 MAFVVTDNCIQCKYTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPAEAIFEEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E + +WPNIT KK+ LP A + DG K E Sbjct: 61 IPAGMEHFIELNAELSEEWPNITEKKDPLPDAEEWDGKPNKLEHL 105 >gi|37927460|pdb|1PC4|A Chain A, Crystal Structure Of The P50a Mutant Of Ferredoxin I At 1.65 A Resolution Length = 107 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPEC AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECAAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 105 >gi|146308040|ref|YP_001188505.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|145576241|gb|ABP85773.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] Length = 107 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 63/103 (61%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NC+ CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCVKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ ++++N++ A WPNIT KKE+LP A + DGVK K + Sbjct: 61 VPEDMQEYIELNADLAEVWPNITEKKEALPDAEEWDGVKDKLQ 103 >gi|167589295|ref|ZP_02381683.1| ferredoxin [Burkholderia ubonensis Bu] Length = 111 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVVTENCI CKHTDCVEVCPVDCF+EGENFL I PDECIDCGVCEPECPV AI+ D Sbjct: 1 MAYVVTENCINCKHTDCVEVCPVDCFHEGENFLVIDPDECIDCGVCEPECPVGAIRQDVA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N E A WP +T +K +LP AA+ V+ K+++ Sbjct: 61 LDADQVHYASLNRELAQSWPTLTIRKPALPDAAQWKDVEGKFQQL 105 >gi|37927462|pdb|1PC5|A Chain A, Crystal Structure Of The P50g Mutant Of Ferredoxin I At 1.8 A Resolution Length = 107 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPEC AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECGAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 VPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 105 >gi|157831046|pdb|1FDD|A Chain A, Azotobacter Vinelandii Ferredoxin I: Aspartate 15 Facilitates Proton Transfer To The Reduced [3fe-4s] Cluster Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T+CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTNCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|157834956|pdb|2FD2|A Chain A, Crystallographic Analysis Of Two Site-Directed Mutants Of Azotobacter Vinelandii Ferredoxin Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVD FYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDAFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|9256973|pdb|1F5B|A Chain A, Crystal Structure Of F2h Ferredoxin 1 Mutant From Azotobacter Vinelandii At 1.75 Angstrom Resolution Length = 106 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AHVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|148653815|ref|YP_001280908.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572899|gb|ABQ94958.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Psychrobacter sp. PRwf-1] Length = 107 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++++N+E A +WPNIT K LP A K DGV+ K + Sbjct: 61 VPKGQEEFIELNAELAEEWPNITEMKGQLPDAEKWDGVEGKIQ 103 >gi|157831122|pdb|1FRI|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPV+CFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVNCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|329890830|ref|ZP_08269173.1| ferredoxin-2 [Brevundimonas diminuta ATCC 11568] gi|328846131|gb|EGF95695.1| ferredoxin-2 [Brevundimonas diminuta ATCC 11568] Length = 113 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 71/112 (63%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I PDECIDCGVCEPECPVDAI PDTE Sbjct: 1 MTYIVTDACVKCKFMDCVEVCPVDCFYEGENFLVIAPDECIDCGVCEPECPVDAIVPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL++N+EYA WPNIT K + + K+EKYFSP PG Sbjct: 61 DEPDGKWLQVNAEYAKVWPNITVKGVPPADREQYERETGKFEKYFSPKPGKG 112 >gi|157830133|pdb|1AXQ|A Chain A, Ferricyanide Oxidized Fdi gi|157831044|pdb|1FDA|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|157831045|pdb|1FDB|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|157831059|pdb|1FER|A Chain A, Structure At Ph 6.5 Of Ferredoxin I From Azotobacter Vinelandii At 2.3 Angstroms Resolution gi|157837034|pdb|5FD1|A Chain A, Crystal Structures Of Oxidized And Reduced Azotobacter Vinelandii Ferredoxin At Ph 8 And Ph 6 gi|225734355|pdb|6FD1|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii Low Temperature, 1.35 A Length = 106 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|50250469|emb|CAH03855.1| Ferredoxin I [Pseudomonas stutzeri] Length = 106 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++L A + DGVK K + Sbjct: 61 VPEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ 103 >gi|229365481|dbj|BAH57989.1| hypothetical protein [Acetobacter lovaniensis] Length = 112 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 69/108 (63%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 3 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 62 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNIT K A + K E SPNP Sbjct: 63 DRAAAWAEINAKYATQWPNITRKGTPPADAEEWKDKPNKTE-LLSPNP 109 >gi|315498121|ref|YP_004086925.1| ferredoxin a [Asticcacaulis excentricus CB 48] gi|315416133|gb|ADU12774.1| ferredoxin A [Asticcacaulis excentricus CB 48] Length = 113 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 70/112 (62%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I+PDECIDCGVCEPECPVDAIKPDTE Sbjct: 1 MTYIVTDPCVKCKFMDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPVDAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL++NS+YA WPNI+ K + K+EKYFS PG Sbjct: 61 DEPDGKWLEVNSKYARVWPNISVKGTPPADREDFERETGKFEKYFSEKPGDG 112 >gi|296537277|ref|ZP_06899163.1| ferredoxin [Roseomonas cervicalis ATCC 49957] gi|296262395|gb|EFH09134.1| ferredoxin [Roseomonas cervicalis ATCC 49957] Length = 110 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 66/111 (59%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTENCIRCKYMDCVEVCPVDCFYVGENMLVIHPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 W ++N Y+ QWPNIT K E+ A +G K + F P PG Sbjct: 61 DKAADWAELNRTYSQQWPNITRKGEAPEDAEAWNGKPDK-KALFDPKPGEP 110 >gi|157831123|pdb|1FRJ|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDC YEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCIYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|110834671|ref|YP_693530.1| ferredoxin, 4Fe-4S [Alcanivorax borkumensis SK2] gi|110647782|emb|CAL17258.1| ferredoxin, 4Fe-4S [Alcanivorax borkumensis SK2] Length = 107 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEGENFL IHPDECIDC +CEPECPV+AI + E Sbjct: 1 MTFVVGENCINCKHTDCVEVCPVDCFYEGENFLVIHPDECIDCALCEPECPVNAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + +L+IN++ A +WPNIT K++ A + DGV K EK Sbjct: 61 LPDDQQDFLEINADLAEKWPNITEMKDAPDDAEEWDGVPNKREKLI 106 >gi|46371302|gb|AAS90417.1| ferredoxin A [Azotobacter chroococcum] Length = 107 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N++ A WPNIT KKE+L A DGVK K + Sbjct: 61 VPEDMQEFIQMNADLAEVWPNITEKKEALSDAEDWDGVKGKLQHL 105 >gi|157831126|pdb|1FRM|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +C PECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCAPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|157831125|pdb|1FRL|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPD CIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDSCIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|312959253|ref|ZP_07773771.1| ferredoxin [Pseudomonas fluorescens WH6] gi|311286513|gb|EFQ65076.1| ferredoxin [Pseudomonas fluorescens WH6] Length = 107 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N E A WPNIT +K+ +P AA+ DG K E+ Sbjct: 61 VPAGMEQFIQLNVELAEVWPNITERKDPMPDAAEWDGKPNKIEQL 105 >gi|258541199|ref|YP_003186632.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01] gi|256632277|dbj|BAH98252.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01] gi|256635334|dbj|BAI01303.1| ferredoxin [Acetobacter pasteurianus IFO 3283-03] gi|256638389|dbj|BAI04351.1| ferredoxin [Acetobacter pasteurianus IFO 3283-07] gi|256641443|dbj|BAI07398.1| ferredoxin [Acetobacter pasteurianus IFO 3283-22] gi|256644498|dbj|BAI10446.1| ferredoxin [Acetobacter pasteurianus IFO 3283-26] gi|256647553|dbj|BAI13494.1| ferredoxin [Acetobacter pasteurianus IFO 3283-32] gi|256650606|dbj|BAI16540.1| ferredoxin [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653597|dbj|BAI19524.1| ferredoxin [Acetobacter pasteurianus IFO 3283-12] Length = 110 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 69/108 (63%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNIT K A + K E SPNP Sbjct: 61 DRAAAWAEINAKYATQWPNITRKGTPPADAEEWKDKPNKTE-LLSPNP 107 >gi|11513606|pdb|1G6B|A Chain A, Crystal Structure Of P47s Mutant Of Ferredoxin I Length = 106 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CE ECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCESECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|294084640|ref|YP_003551398.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664213|gb|ADE39314.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 112 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 68/112 (60%), Positives = 82/112 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V ENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AI PD+E Sbjct: 1 MTYIVNENCINCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPPEAILPDSE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P WL +N + + WPNI K + +P+A + K++KYF+ PG N Sbjct: 61 PEATKWLDLNRDMSEIWPNIGQKIDEMPNAKAAESETGKFDKYFTKAPGKGN 112 >gi|167648072|ref|YP_001685735.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Caulobacter sp. K31] gi|167350502|gb|ABZ73237.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caulobacter sp. K31] Length = 113 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 74/112 (66%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ CI CK DCVEVCPVDCFYEGENFLAI+PDECIDCGVCEPECP+DAIKPDTE Sbjct: 1 MTYIVTDACIKCKFMDCVEVCPVDCFYEGENFLAINPDECIDCGVCEPECPIDAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL+INSEYA WPNIT K + K+EKYFS PG Sbjct: 61 DEPDGKWLRINSEYAKIWPNITVKGVPPADREAFERETGKFEKYFSEKPGKG 112 >gi|12084520|pdb|1GAO|A Chain A, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084521|pdb|1GAO|B Chain B, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084522|pdb|1GAO|C Chain C, Crystal Structure Of The L44s Mutant Of Ferredoxin I gi|12084523|pdb|1GAO|D Chain D, Crystal Structure Of The L44s Mutant Of Ferredoxin I Length = 106 Score = 152 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCASCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|330807813|ref|YP_004352275.1| ferredoxin I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375921|gb|AEA67271.1| ferredoxin I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 107 Score = 152 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 81/105 (77%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 VPAGMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 105 >gi|157884757|pdb|6FDR|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii At 100k, Na Dithionite Reduced At Ph 8.5, Resolution 1.4 A gi|157884763|pdb|7FD1|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii At Ph 8.5, 100 K, 1.35 A gi|157884764|pdb|7FDR|A Chain A, 7-Fe Ferredoxin From Azotobacter Vinelandii, Na Dithionite Reduced, Ph 8.5, 1.4a Resolution, 100 K Length = 106 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|254419877|ref|ZP_05033601.1| 4Fe-4S binding domain protein [Brevundimonas sp. BAL3] gi|196186054|gb|EDX81030.1| 4Fe-4S binding domain protein [Brevundimonas sp. BAL3] Length = 113 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK DCVEVCPVDCFYEGENFL I PDECIDCGVCEPECPVDAI PDTE Sbjct: 1 MTYIVTDACVKCKFMDCVEVCPVDCFYEGENFLVIAPDECIDCGVCEPECPVDAIVPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 WL++N+EYA WPNIT K + + KYEKYFSP PG Sbjct: 61 DEPDGKWLQVNAEYAKVWPNITVKGTPPADREQYERETGKYEKYFSPKPGKG 112 >gi|296112737|ref|YP_003626675.1| ferredoxin 1 [Moraxella catarrhalis RH4] gi|295920431|gb|ADG60782.1| ferredoxin 1 [Moraxella catarrhalis RH4] gi|326560986|gb|EGE11351.1| ferredoxin 1 [Moraxella catarrhalis 7169] gi|326563774|gb|EGE14025.1| ferredoxin 1 [Moraxella catarrhalis 46P47B1] gi|326563977|gb|EGE14227.1| ferredoxin 1 [Moraxella catarrhalis 12P80B1] gi|326566788|gb|EGE16927.1| ferredoxin 1 [Moraxella catarrhalis 103P14B1] gi|326567369|gb|EGE17484.1| ferredoxin 1 [Moraxella catarrhalis BC1] gi|326569888|gb|EGE19938.1| ferredoxin 1 [Moraxella catarrhalis BC8] gi|326571504|gb|EGE21519.1| ferredoxin 1 [Moraxella catarrhalis BC7] gi|326575213|gb|EGE25141.1| ferredoxin 1 [Moraxella catarrhalis CO72] gi|326576701|gb|EGE26608.1| ferredoxin 1 [Moraxella catarrhalis 101P30B1] gi|326577625|gb|EGE27502.1| ferredoxin 1 [Moraxella catarrhalis O35E] Length = 107 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 P--GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +LKIN E + WPNIT KK++LP K DGV+ K + Sbjct: 61 VPSGQEEFLKINEELSAVWPNITEKKDALPDYEKWDGVEGKLQ 103 >gi|90020902|ref|YP_526729.1| RecA DNA recombination protein [Saccharophagus degradans 2-40] gi|89950502|gb|ABD80517.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 107 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV +NCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGDNCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +L++N+E A WPNIT KK++ A + DGV+ K + Sbjct: 61 LPDDQQAFLELNAELAEVWPNITEKKDAPADAEEWDGVEGKLQ 103 >gi|254786793|ref|YP_003074222.1| ferredoxin-1 [Teredinibacter turnerae T7901] gi|237685053|gb|ACR12317.1| ferredoxin-1 [Teredinibacter turnerae T7901] Length = 107 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 P--GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E +L++N+E A WPNIT KKE+ A + DGV+ K + Sbjct: 61 LPSDQEAFLELNAELAEVWPNITEKKEAPADAEEWDGVEGKLQ 103 >gi|331006208|ref|ZP_08329530.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC1989] gi|330419965|gb|EGG94309.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC1989] Length = 107 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 66/105 (62%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP DAI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPADAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E++L++N+E A WPNIT KE+ A + DGV+ K + Sbjct: 61 LPEGQEVFLELNAELAETWPNITEMKEAPADAEEWDGVEGKLQHL 105 >gi|28871202|ref|NP_793821.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213969150|ref|ZP_03397289.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|301383955|ref|ZP_07232373.1| ferredoxin [Pseudomonas syringae pv. tomato Max13] gi|302064159|ref|ZP_07255700.1| ferredoxin [Pseudomonas syringae pv. tomato K40] gi|302134755|ref|ZP_07260745.1| ferredoxin [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854452|gb|AAO57516.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213926148|gb|EEB59704.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|330872695|gb|EGH06844.1| ferredoxin [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016400|gb|EGH96456.1| ferredoxin [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 107 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+ +P AA DG K K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDGMPDAADWDGKKGKIEHL 105 >gi|255021900|ref|ZP_05293910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus caldus ATCC 51756] gi|254968724|gb|EET26276.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus caldus ATCC 51756] Length = 206 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VVTE+CI CK+TDCV VCPVDCF+EG NFL I P ECIDC +C ECPVDAI D Sbjct: 1 MTHVVTESCIQCKYTDCVTVCPVDCFHEGPNFLVIDPCECIDCTLCVAECPVDAIFRDVD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +L++N++ A WP I KK +LP A + V K E Sbjct: 61 MPDGSEGYLELNAQLAQIWPVIIQKKAALPEAERWRHVMPKRE 103 >gi|157831124|pdb|1FRK|A Chain A, Azotobacter Vinelandii Ferredoxin I: Alteration Of Individual Surface Charges And The [4fe-4s] Cluster Reduction Potential Length = 106 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|26988357|ref|NP_743782.1| ferrodoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|148549359|ref|YP_001269461.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida F1] gi|60392274|sp|P0A122|FER1_PSEPK RecName: Full=Ferredoxin 1 gi|60392275|sp|P0A123|FER1_PSEPU RecName: Full=Ferredoxin 1 gi|24983108|gb|AAN67246.1|AE016351_8 ferrodoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|7243294|dbj|BAA92688.1| ferrodoxin [Pseudomonas putida] gi|14646832|dbj|BAB62000.1| [3Fe-4S][4Fe-4S]ferredoxin [Pseudomonas putida] gi|148513417|gb|ABQ80277.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas putida F1] gi|313500208|gb|ADR61574.1| FdxA [Pseudomonas putida BIRD-1] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 P--GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 VPSGMENFIELNAELAEIWPNITERKDALPDAEEWDGKPGKIADL 105 >gi|237800177|ref|ZP_04588638.1| ferredoxin [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023034|gb|EGI03091.1| ferredoxin [Pseudomonas syringae pv. oryzae str. 1_6] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+ +P AA+ DG K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDGMPDAAEWDGKPGKIEHL 105 >gi|53803364|ref|YP_114883.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] gi|53757125|gb|AAU91416.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCV+VCPVDCF+EG NFL I PDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAHAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++++N+E + WP+I+ KE+LP A + +G K + Sbjct: 61 LPEGQEQFIQLNAELSKIWPSISEVKEALPDADEWNGKPDKLQ 103 >gi|5305131|emb|CAB46192.1| ferrodoxin [Pseudomonas putida] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 P--GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 VPSGMENFIELNAELAEIWPNITERKDALPDAEEWDGKTGKIADL 105 >gi|170723212|ref|YP_001750900.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida W619] gi|169761215|gb|ACA74531.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida W619] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E +L++N+E A WPNIT +K++LP A + DG K Sbjct: 61 VPAGMENFLELNAELAEIWPNITERKDALPDAEEWDGKPGKIADL 105 >gi|11514021|pdb|1G3O|A Chain A, Crystal Structure Of V19e Mutant Of Ferredoxin I Length = 106 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVE CPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEECPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|254245946|ref|ZP_04939267.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|124870722|gb|EAY62438.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] Length = 134 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 28 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 87 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP+IT K + A + V+ K Sbjct: 88 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQDKLHLL 132 >gi|9622249|gb|AAF89693.1|AF170100_1 ferredoxin A [Pseudomonas aeruginosa] Length = 107 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI + CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIQVQIHHCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++NSE A WPNIT KK++LP A + DGV K + Sbjct: 61 VPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHL 105 >gi|104783163|ref|YP_609661.1| ferredoxin [Pseudomonas entomophila L48] gi|95112150|emb|CAK16877.1| ferredoxin [Pseudomonas entomophila L48] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 VPAGMENFIELNAELAEIWPNITEKKDALPDAEEWDGKPGKIADL 105 >gi|158424426|ref|YP_001525718.1| ferredoxin [Azorhizobium caulinodans ORS 571] gi|158331315|dbj|BAF88800.1| ferredoxin [Azorhizobium caulinodans ORS 571] Length = 109 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 65/110 (59%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+ DCV VCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PDT+ Sbjct: 1 MAYVVTDGCIRCKYMDCVSVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 P WL +N+EYA WPNIT K E A G K P P Sbjct: 61 PRAGEWLALNAEYAATWPNITEKGEPPADADDWKGKAGKL-ALLDPAPAA 109 >gi|330967908|gb|EGH68168.1| ferredoxin [Pseudomonas syringae pv. actinidiae str. M302091] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 67/105 (63%), Positives = 81/105 (77%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+S+P AA+ DG K K E Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDSMPDAAEWDGKKGKIEDL 105 >gi|157872416|pdb|1D3W|A Chain A, Crystal Structure Of Ferredoxin 1 D15e Mutant From Azotobacter Vinelandii At 1.7 Angstrom Resolution Length = 106 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T+CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTECVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|70728590|ref|YP_258339.1| ferredoxin [Pseudomonas fluorescens Pf-5] gi|68342889|gb|AAY90495.1| ferredoxin [Pseudomonas fluorescens Pf-5] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KK+ LP A + DGVK K + Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGKIKDL 105 >gi|167032191|ref|YP_001667422.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida GB-1] gi|166858679|gb|ABY97086.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida GB-1] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITERKDALPDAEEWDGKTGKIADL 105 >gi|329114808|ref|ZP_08243565.1| Ferredoxin-2 [Acetobacter pomorum DM001] gi|326695939|gb|EGE47623.1| Ferredoxin-2 [Acetobacter pomorum DM001] Length = 112 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 68/108 (62%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 3 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 62 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YATQWPNIT K A + K E SP+P Sbjct: 63 DRAAAWAEINAKYATQWPNITRKGTPPADAEEWKDKPNKTE-LLSPDP 109 >gi|157831128|pdb|1FRX|A Chain A, Structure And Properties Of C20s Fdi Mutant Length = 106 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVSPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|2098504|pdb|1FTC|A Chain A, Y13c Mutant Of Azotobacter Vinelandii Fdi gi|2098505|pdb|1FTC|B Chain B, Y13c Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKXTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|114320642|ref|YP_742325.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227036|gb|ABI56835.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 107 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIYSEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E +L +N+E A +WP IT +K+ A + DG K E Sbjct: 61 LPAGQEEFLALNAELAQEWPVITEQKDPPEDADEWDGKPNKLELL 105 >gi|329896375|ref|ZP_08271474.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC3088] gi|328921795|gb|EGG29166.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium IMCC3088] Length = 107 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCINCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++L++N+E A WPNIT K++LP A + G K Sbjct: 61 LPEDQQVFLELNAELAEIWPNITEMKDALPDAEEWAGKSNKL 102 >gi|46371298|gb|AAS90414.1| ferredoxin A [Azomonas macrocytogenes] Length = 107 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIKCKYTDCVEVRPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N++ A WPNIT KKE+L A DGVK K + Sbjct: 61 VPEDMQEFIQLNADLAEVWPNITEKKEALSDAEDWDGVKGKLQHL 105 >gi|33150233|gb|AAP97087.1| ferredoxin [Pseudomonas chlororaphis] Length = 107 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KK+SLP A + DGVK K + Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKDSLPDAEEWDGVKGKIKDL 105 >gi|361779|prf||1410240A ferredoxin Length = 106 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 T+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 TFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N++ A WPNIT KK++L A + DGVK K + Sbjct: 61 PEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQ 102 >gi|77457360|ref|YP_346865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens Pf0-1] gi|77381363|gb|ABA72876.1| ferredoxin I [Pseudomonas fluorescens Pf0-1] Length = 107 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KKESLP A + DGVK K + Sbjct: 61 VPEEMQEFIQLNVELAEIWPNITEKKESLPDAEEWDGVKGKIKDL 105 >gi|221201316|ref|ZP_03574355.1| putative ferredoxin [Burkholderia multivorans CGD2M] gi|221208796|ref|ZP_03581794.1| putative ferredoxin [Burkholderia multivorans CGD2] gi|221214124|ref|ZP_03587097.1| putative ferredoxin [Burkholderia multivorans CGD1] gi|221166301|gb|EED98774.1| putative ferredoxin [Burkholderia multivorans CGD1] gi|221171252|gb|EEE03701.1| putative ferredoxin [Burkholderia multivorans CGD2] gi|221178584|gb|EEE10992.1| putative ferredoxin [Burkholderia multivorans CGD2M] Length = 136 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 30 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 89 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 90 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDKLHLL 134 >gi|304310610|ref|YP_003810208.1| FDX ferredoxin [gamma proteobacterium HdN1] gi|301796343|emb|CBL44551.1| FDX ferredoxin [gamma proteobacterium HdN1] Length = 107 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E A +WPNIT KK+ LP A + DG K + Sbjct: 61 VPDDQQQFIPLNAELAEKWPNITEKKDPLPEAKEWDGKPDKMK 103 >gi|9256974|pdb|1F5C|A Chain A, Crystal Structure Of F25h Ferredoxin 1 Mutant From Azotobacter Vinelandii At 1.75 Angstrom Resolution Length = 106 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDC YEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCHYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|157829710|pdb|1A6L|A Chain A, T14c Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+ DCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYCDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|149374516|ref|ZP_01892290.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] gi|149361219|gb|EDM49669.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N++ A +WPNIT KK+ LP A + DG K + Sbjct: 61 LPADQVQFVELNADLAGKWPNITEKKDPLPEAEEWDGKPDKLQ 103 >gi|157831043|pdb|1FD2|A Chain A, Site-Directed Mutagenesis Of Azotobacter Vinelandii Ferredoxin I. (Fe-S) Cluster-Driven Protein Rearrangement Length = 106 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEV PVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVAPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|332969296|gb|EGK08322.1| ferredoxin [Psychrobacter sp. 1501(2011)] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E A +WPNIT + LP A K DGV+ K + Sbjct: 61 VPKGQEEFIALNAELAEEWPNITEMHDQLPDAEKWDGVEGKIQ 103 >gi|325277034|ref|ZP_08142695.1| ferredoxin [Pseudomonas sp. TJI-51] gi|324097831|gb|EGB96016.1| ferredoxin [Pseudomonas sp. TJI-51] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT +K++LP A + DG K Sbjct: 61 VPAGMENFIELNAELAEIWPNITERKDALPDAEEWDGKIGKIADL 105 >gi|257454098|ref|ZP_05619372.1| ferredoxin-1 [Enhydrobacter aerosaccus SK60] gi|257448576|gb|EEV23545.1| ferredoxin-1 [Enhydrobacter aerosaccus SK60] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NC+ CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCVRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E A +WPNI+ + LP A + DGV K + Sbjct: 61 VPKGQEIYIELNAELAEKWPNISAMHDPLPDAKEWDGVPNKLQ 103 >gi|148262070|ref|YP_001236197.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|326405582|ref|YP_004285664.1| ferredoxin [Acidiphilium multivorum AIU301] gi|146403751|gb|ABQ32278.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] gi|325052444|dbj|BAJ82782.1| ferredoxin [Acidiphilium multivorum AIU301] Length = 110 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W++ N E+AT WPN+T K A + K E FSP P Sbjct: 61 GKASAWIEKNREFATLWPNMTRKGTPPADADEWKDRDGKAE-LFSPEP 107 >gi|120555004|ref|YP_959355.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinobacter aquaeolei VT8] gi|120324853|gb|ABM19168.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Marinobacter aquaeolei VT8] Length = 107 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 62/103 (60%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MAFIVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +++IN+E A +WPNIT KK+ LP A + DG K + Sbjct: 61 LPAGQEAFVEINAELAGKWPNITEKKDPLPDAEEWDGKPDKLK 103 >gi|153872043|ref|ZP_02001049.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beggiatoa sp. PS] gi|152071489|gb|EDN68949.1| 4Fe-4S ferredoxin, iron-sulfur binding [Beggiatoa sp. PS] Length = 109 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCILCK+TDC+EVCPVDCF+EG NFL I P+ECIDC +CEPECP AI + Sbjct: 1 MAFVVTENCILCKYTDCIEVCPVDCFHEGPNFLVIDPEECIDCTLCEPECPAKAIYSEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +++IN++ + +WP IT +K+ P A + DG K + Sbjct: 61 LPSEQQHFVQINADLSQKWPVITERKDPPPDAEQWDGKPDKLQ 103 >gi|6729695|pdb|1B0T|A Chain A, D15kK84D MUTANT OF AZOTOBACTER VINELANDII FDI Length = 106 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+T CVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTKCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT K+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEDKDPLPDAEDWDGVKGKLQHL 104 >gi|58257339|gb|AAK30050.2| ferredoxin [Pseudomonas fluorescens] Length = 107 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV++CPVDCFY+G NFL IHPDECIDC +CEP CP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVKICPVDCFYKGPNFLVIHPDECIDCALCEPRCPAQAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P ++ ++++N E A WPNIT KK+ LP A + DGVK K + Sbjct: 61 VPPDMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGKIKDL 105 >gi|332304879|ref|YP_004432730.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172208|gb|AEE21462.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 130 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +CEPECP AI D Sbjct: 24 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCALCEPECPAKAIYQDDK 83 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E + ++N+E + WPNI A + DGV K E Sbjct: 84 LPAGQEAFNELNAELSKIWPNIIEVIPPPADAKEWDGVPNKLE 126 >gi|319786641|ref|YP_004146116.1| hypothetical protein Psesu_1035 [Pseudoxanthomonas suwonensis 11-1] gi|317465153|gb|ADV26885.1| hypothetical protein Psesu_1035 [Pseudoxanthomonas suwonensis 11-1] Length = 107 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E ++ +N+E + WP IT +KE LP AA+ DG K + Sbjct: 61 VPAGQEGFVALNAELSRAWPVITVRKEPLPDAAEWDGKGDKLK 103 >gi|270157017|ref|ZP_06185674.1| ferredoxin-1 [Legionella longbeachae D-4968] gi|289164568|ref|YP_003454706.1| ferredoxin [Legionella longbeachae NSW150] gi|269989042|gb|EEZ95296.1| ferredoxin-1 [Legionella longbeachae D-4968] gi|288857741|emb|CBJ11585.1| putative ferredoxin [Legionella longbeachae NSW150] Length = 109 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHP+ECIDC +CEPECPV+AI + + Sbjct: 1 MTFVVTESCIKCKYTDCVEVCPVDCFYEGPNFLVIHPEECIDCALCEPECPVNAIVSEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P + + ++N++ + WPNIT+KK++ A + VK K + Sbjct: 61 LTPEQQQFKELNAKLSKNWPNITSKKDAPADAKDWEEVKDKLQHL 105 >gi|52842141|ref|YP_095940.1| ferredoxin II (4Fe-4S) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294810|ref|YP_127225.1| hypothetical protein lpl1887 [Legionella pneumophila str. Lens] gi|52629252|gb|AAU27993.1| ferredoxin II (4Fe-4S) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53754642|emb|CAH16126.1| hypothetical protein lpl1887 [Legionella pneumophila str. Lens] Length = 111 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + + Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTEEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|6980482|pdb|1B0V|A Chain A, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980483|pdb|1B0V|B Chain B, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980484|pdb|1B0V|C Chain C, I40n Mutant Of Azotobacter Vinelandii Fdi gi|6980485|pdb|1B0V|D Chain D, I40n Mutant Of Azotobacter Vinelandii Fdi Length = 106 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDEC DC +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECNDCALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|87122438|ref|ZP_01078318.1| ferredoxin I [Marinomonas sp. MED121] gi|86162231|gb|EAQ63516.1| ferredoxin I [Marinomonas sp. MED121] Length = 107 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP AI + E Sbjct: 1 MAFVVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPASAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 E ++++N++ A WPNIT KK++L AA DGV+ K E Sbjct: 61 LPEDQEHFVELNADLANVWPNITEKKDALADAATWDGVEDKLEHL 105 >gi|86157959|ref|YP_464744.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|197122738|ref|YP_002134689.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|220917521|ref|YP_002492825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|85774470|gb|ABC81307.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|196172587|gb|ACG73560.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|219955375|gb|ACL65759.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 107 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVV E CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDCG CEP CP AI P+ Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCGACEPACPTKAIFPEES 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++NSE + WPNIT KK+ LP A + V++K +K Sbjct: 61 LPAKWNEYVQLNSELSKAWPNITEKKDPLPEAEEWKDVEEKRDKL 105 >gi|296107515|ref|YP_003619216.1| ferredoxin II (4Fe-4S) [Legionella pneumophila 2300/99 Alcoy] gi|295649417|gb|ADG25264.1| ferredoxin II (4Fe-4S) [Legionella pneumophila 2300/99 Alcoy] Length = 111 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + + Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTDEQQQFKELNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|71083130|ref|YP_265849.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1062] gi|91762443|ref|ZP_01264408.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1002] gi|71062243|gb|AAZ21246.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1062] gi|91718245|gb|EAS84895.1| ferredoxin [Candidatus Pelagibacter ubique HTCC1002] Length = 108 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 68/107 (63%), Positives = 79/107 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + CI CK DCVEVCPVDCFYEG+N L I P+ECIDCGVCEPECPVDAI DTE Sbjct: 1 MTYVVNDKCIKCKLMDCVEVCPVDCFYEGKNMLVIKPEECIDCGVCEPECPVDAIVADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 G E WL++N++Y+ WPNIT KK+ K + KY+KYFS N Sbjct: 61 SGSEKWLELNTKYSEIWPNITIKKDPPEDNEKYKNEENKYDKYFSEN 107 >gi|54297846|ref|YP_124215.1| hypothetical protein lpp1898 [Legionella pneumophila str. Paris] gi|53751631|emb|CAH13050.1| hypothetical protein lpp1898 [Legionella pneumophila str. Paris] Length = 111 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + + Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + K+N+E + WPNIT KK++ A + VK K + Sbjct: 61 LTEEQQQFKKLNAELSKTWPNITAKKDAPSDAKDWEEVKDKLQ 103 >gi|254499063|ref|ZP_05111755.1| ferredoxin II (4Fe-4S) [Legionella drancourtii LLAP12] gi|254351690|gb|EET10533.1| ferredoxin II (4Fe-4S) [Legionella drancourtii LLAP12] Length = 109 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 60/103 (58%), Positives = 77/103 (74%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE+CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV+AI + + Sbjct: 1 MTFVVTESCIRCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVNAIVSEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A +W NIT KK++ P A + VK K + Sbjct: 61 LTDEQQQFKELNAELAQKWSNITAKKDAPPDAKDWEDVKDKLQ 103 >gi|302187930|ref|ZP_07264603.1| ferredoxin [Pseudomonas syringae pv. syringae 642] gi|330936780|gb|EGH40942.1| ferredoxin [Pseudomonas syringae pv. pisi str. 1704B] gi|330975363|gb|EGH75429.1| ferredoxin [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 107 Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 80/105 (76%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+++P AA+ DG K + Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKTGKIAEL 105 >gi|332717239|ref|YP_004444705.1| Ferredoxin [Agrobacterium sp. H13-3] gi|325063924|gb|ADY67614.1| Ferredoxin [Agrobacterium sp. H13-3] Length = 111 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YVVTENCI CK+ DCVEVCPV+CFY GEN L IHPD+CIDCG+CE ECP AI+PDTE Sbjct: 1 MSYVVTENCIACKYMDCVEVCPVECFYAGENMLVIHPDQCIDCGICERECPAAAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL +WL +N Y+ WP + K+ A M+G K+ FS NPG + Sbjct: 61 AGLHVWLDLNRHYSGIWPRVHQKRTPPDDADIMNGAAAKF-SIFSKNPGAGD 111 >gi|58040345|ref|YP_192309.1| ferredoxin [Gluconobacter oxydans 621H] gi|58002759|gb|AAW61653.1| Ferredoxin [Gluconobacter oxydans 621H] Length = 110 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 66/108 (61%), Positives = 80/108 (74%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK TDCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFTDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W++IN++Y+TQWPN+T K +++P A + K S P Sbjct: 61 NRAAPWIEINAKYSTQWPNMTRKIDAMPDAEEWKDKPGK-AAMLSEAP 107 >gi|326794018|ref|YP_004311838.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] gi|326544782|gb|ADZ90002.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] Length = 107 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP AI + E Sbjct: 1 MAFIVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPAGAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E+++++N + A WPNI +K+ LP AA+ DGV+ K E Sbjct: 61 LPEGQEVFIELNQDLALIWPNIAERKDPLPDAAQWDGVEDKLEHL 105 >gi|171463171|ref|YP_001797284.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192709|gb|ACB43670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 107 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTYVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCVPECPVNAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++K+N+E + W +IT K +LP A + VK K ++ Sbjct: 61 VPGDQQSFIKLNAELSPSWTSITKSKAALPDAEEWKDVKNKLDQLV 106 >gi|126667869|ref|ZP_01738835.1| RecA DNA recombination protein [Marinobacter sp. ELB17] gi|126627685|gb|EAZ98316.1| RecA DNA recombination protein [Marinobacter sp. ELB17] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT++VT+NCI CKHTDCVEVCPVDCFYEG NFL I PDECIDC +CEPECPV+AI + E Sbjct: 1 MTFIVTDNCIKCKHTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPVEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++++N++ A +WPNIT KKE++ A K DGV K + Sbjct: 61 LPDNQKVFIELNADLAGKWPNITEKKEAMVDAEKWDGVPDKLQ 103 >gi|71736534|ref|YP_275946.1| ferredoxin [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487048|ref|ZP_05641089.1| ferredoxin [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71557087|gb|AAZ36298.1| ferredoxin [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323088|gb|EFW79177.1| ferredoxin [Pseudomonas syringae pv. glycinea str. B076] gi|320329640|gb|EFW85629.1| ferredoxin [Pseudomonas syringae pv. glycinea str. race 4] gi|330878041|gb|EGH12190.1| ferredoxin [Pseudomonas syringae pv. glycinea str. race 4] gi|330894626|gb|EGH27287.1| ferredoxin [Pseudomonas syringae pv. mori str. 301020] gi|330985142|gb|EGH83245.1| ferredoxin [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009313|gb|EGH89369.1| ferredoxin [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKPGKIADL 105 >gi|229588702|ref|YP_002870821.1| ferredoxin I [Pseudomonas fluorescens SBW25] gi|37930233|gb|AAP76284.1| unknown [Pseudomonas sp. PCL1171] gi|229360568|emb|CAY47425.1| ferredoxin I [Pseudomonas fluorescens SBW25] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT +K+ +P AA+ DG K K Sbjct: 61 VPAEMQEFIQLNVELAEIWPNITERKDPMPDAAEWDGKKGKIADL 105 >gi|114570845|ref|YP_757525.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Maricaulis maris MCS10] gi|114341307|gb|ABI66587.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Maricaulis maris MCS10] Length = 113 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 75/113 (66%), Positives = 86/113 (76%), Gaps = 1/113 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPECPV+AIKPDTE Sbjct: 1 MTYIVTDACVRCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPECPVEAIKPDTE 60 Query: 61 PG-LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WL INS++A WPNIT +K++ A M KYEKYFS PG + Sbjct: 61 DDKDGKWLAINSKFAETWPNITLRKDAPADADAMADETGKYEKYFSEKPGSGD 113 >gi|330959230|gb|EGH59490.1| ferredoxin [Pseudomonas syringae pv. maculicola str. ES4326] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 80/105 (76%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+++P AA+ DG K + Sbjct: 61 IPAGMENFIELNAELADVWPNITEKKDAMPDAAEWDGKPGKIAEL 105 >gi|66044623|ref|YP_234464.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|63255330|gb|AAY36426.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|330896093|gb|EGH28314.1| ferredoxin [Pseudomonas syringae pv. japonica str. M301072PT] gi|330968926|gb|EGH68992.1| ferredoxin [Pseudomonas syringae pv. aceris str. M302273PT] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEIWPNITEKKDAMPDAAEWDGKTGKIADL 105 >gi|296115139|ref|ZP_06833780.1| ferredoxin [Gluconacetobacter hansenii ATCC 23769] gi|295978240|gb|EFG84977.1| ferredoxin [Gluconacetobacter hansenii ATCC 23769] Length = 110 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVISPDECIDCGVCEPECPAEAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN++YA WPNIT K ++ A + K E SP P Sbjct: 61 DRATAWAEINAKYAGVWPNITRKGDAPADAEEWKDKPNKAE-LLSPEP 107 >gi|10120847|pdb|1FF2|A Chain A, Crystal Structure Of The C42d Mutant Of Azotobacter Vinelandii 7fe Ferredoxin (Fdi) Length = 106 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 +VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECID +CEPECP AI + E Sbjct: 1 AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDDALCEPECPAQAIFSEDEV 60 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N+E A WPNIT KK+ LP A DGVK K + Sbjct: 61 PEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHL 104 >gi|289626002|ref|ZP_06458956.1| ferredoxin [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651482|ref|ZP_06482825.1| ferredoxin [Pseudomonas syringae pv. aesculi str. 2250] gi|298488244|ref|ZP_07006279.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157252|gb|EFH98337.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330868574|gb|EGH03283.1| ferredoxin [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330950645|gb|EGH50905.1| ferredoxin [Pseudomonas syringae Cit 7] Length = 107 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+++P AA+ DG K Sbjct: 61 IPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKTGKIADL 105 >gi|90416735|ref|ZP_01224665.1| ferredoxin I [marine gamma proteobacterium HTCC2207] gi|90331488|gb|EAS46724.1| ferredoxin I [marine gamma proteobacterium HTCC2207] Length = 107 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT++V +NCI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI + E Sbjct: 1 MTFIVGDNCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVGAIFAEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++L+IN+E A WPNIT K++ AA+ DGV+ K + Sbjct: 61 IPEGQEVFLEINAELADVWPNITEMKDAPADAAEWDGVENKLQ 103 >gi|152997736|ref|YP_001342571.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Marinomonas sp. MWYL1] gi|150838660|gb|ABR72636.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Marinomonas sp. MWYL1] Length = 107 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 80/105 (76%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++VT+NCI CK+TDCVEVCPVDCFYEG NFLAI+PDECIDC +CEPECP +AI + E Sbjct: 1 MAFIVTDNCIRCKYTDCVEVCPVDCFYEGPNFLAINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 E+++++N + + WPNI KK++LP AA+ DGV+ K E Sbjct: 61 LPEDQEVFVELNRDLSLIWPNIAEKKDALPDAAQWDGVEDKLEHL 105 >gi|307824341|ref|ZP_07654567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] gi|307734721|gb|EFO05572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] Length = 107 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 76/105 (72%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK TDCV+VCPVDCF+EG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKFTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIFAEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E+++ +N+E A QWP IT K +LP A + +G + K + Sbjct: 61 LPEGQEVFIALNAELAKQWPVITDVKPALPEADEWNGKEGKLDLL 105 >gi|145588570|ref|YP_001155167.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046976|gb|ABP33603.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 107 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTYVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCVPECPVNAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++K+N+E + W +IT K +LP A + VK K ++ Sbjct: 61 VPGDQQSFIKLNAELSPDWTSITKSKPALPDADEWKDVKNKLDQLV 106 >gi|159186232|ref|NP_356078.2| ferredoxin [Agrobacterium tumefaciens str. C58] gi|159141366|gb|AAK88863.2| ferredoxin [Agrobacterium tumefaciens str. C58] Length = 111 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI CK+ DCVEVCPV+CFYEGEN L IHPD+CIDCG+CE ECP AI+PDTE Sbjct: 1 MPYVVTENCIACKYMDCVEVCPVECFYEGENMLVIHPDQCIDCGICERECPAAAIRPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 GL +WL +N Y+ WP + K+ +A M+G K+ S NPG Sbjct: 61 AGLHVWLDLNRHYSGIWPRVHQKRTPPDNADTMNGAAAKF-SILSKNPGAGG 111 >gi|162147815|ref|YP_001602276.1| ferredoxin [Gluconacetobacter diazotrophicus PAl 5] gi|209542438|ref|YP_002274667.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786392|emb|CAP55974.1| putative ferredoxin [Gluconacetobacter diazotrophicus PAl 5] gi|209530115|gb|ACI50052.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 110 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK DCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 1 MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 W +IN+ Y+ +WPNIT K + A + K + SP P Sbjct: 61 DRAAAWAEINASYSAKWPNITRKGTAPADAEEWKDKPGKKD-LLSPEP 107 >gi|160871760|ref|ZP_02061892.1| ferredoxin [Rickettsiella grylli] gi|159120559|gb|EDP45897.1| ferredoxin [Rickettsiella grylli] Length = 111 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT++VTE CI CK+TDCVEVCPVDCFYEG N L IHPDECIDCG+CEPECPV+AI D Sbjct: 5 MTFLVTEKCIRCKYTDCVEVCPVDCFYEGPNMLVIHPDECIDCGLCEPECPVNAIYVEDD 64 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + +L +N E + +WPNI +K+ P A + + K Sbjct: 65 LPDKYKEFLALNKELSKKWPNIVRRKDPPPDADEWKDKEDKL 106 >gi|88810236|ref|ZP_01125493.1| ferredoxin, 4Fe-4S [Nitrococcus mobilis Nb-231] gi|88791866|gb|EAR22976.1| ferredoxin, 4Fe-4S [Nitrococcus mobilis Nb-231] Length = 107 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTENCI CK+TDCVEVCPVDCF+EG NFLAI P+ECIDC +CEPECP +AI + Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFHEGPNFLAIDPEECIDCTLCEPECPAEAIFSEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +L++N+E A +WP IT K++ A + DG K + Sbjct: 61 LPEEQHHFLELNAELAQKWPVITEMKDAPKDAEEWDGKPGKLQ 103 >gi|254252880|ref|ZP_04946198.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] gi|124895489|gb|EAY69369.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] Length = 134 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 28 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 87 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 88 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDKLHLL 132 >gi|93005103|ref|YP_579540.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92392781|gb|ABE74056.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 107 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCILCK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCILCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++ ++N E A +WPNIT K +P A K DGV+ K + Sbjct: 61 VPKGQEIFTQLNEELAQKWPNITEMKGQMPEAEKWDGVEGKIQ 103 >gi|254282951|ref|ZP_04957919.1| RecA DNA recombination protein [gamma proteobacterium NOR51-B] gi|219679154|gb|EED35503.1| RecA DNA recombination protein [gamma proteobacterium NOR51-B] Length = 107 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N+E A WPNIT KK+ P A G K + Sbjct: 61 LPADQTEFMELNAELADIWPNITEKKDPPPDAEDWAGKPDKLQ 103 >gi|194365291|ref|YP_002027901.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348095|gb|ACF51218.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Stenotrophomonas maltophilia R551-3] Length = 107 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CKHTDCVEVCPVDCF+EG NFL I PDECIDC +CEPECPV+AI P+ Sbjct: 1 MPFVVTENCIKCKHTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPVNAIFPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A +WP +T +K+ A + DG K + Sbjct: 61 VPAGQESFVALNAELAKEWPVLTVRKDPPADAGEWDGKPDKLKLL 105 >gi|237747779|ref|ZP_04578259.1| ferredoxin [Oxalobacter formigenes OXCC13] gi|229379141|gb|EEO29232.1| ferredoxin [Oxalobacter formigenes OXCC13] Length = 107 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT+ CILCK+TDCV+VCPVDCF+EG N L I+P+ECIDC VC PECP +AI D Sbjct: 1 MTHVVTDACILCKYTDCVDVCPVDCFHEGPNTLVINPNECIDCAVCVPECPAEAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N+E + +WP IT K+ +P A K VK K Sbjct: 61 VPENQQEFIALNAELSGKWPTITRSKDPMPDADKWKDVKDKLRHLI 106 >gi|82701854|ref|YP_411420.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosospira multiformis ATCC 25196] gi|82409919|gb|ABB74028.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosospira multiformis ATCC 25196] Length = 107 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI + + Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYSEDD 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++ +N+E + W I KK++LP A V +K EK Sbjct: 61 VPGTQQHFIALNAELSKSWKPIIEKKDALPDADDWAKVTEKLEKL 105 >gi|71064823|ref|YP_263550.1| ferredoxin [Psychrobacter arcticus 273-4] gi|71037808|gb|AAZ18116.1| ferredoxin, 4Fe-Fs binding domain [Psychrobacter arcticus 273-4] Length = 107 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCILCK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTDNCILCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E++ ++N E A +WPNIT KE +P AAK DGV+ K + Sbjct: 61 VPKGQEMFTQLNEELAQKWPNITEMKEQMPEAAKWDGVEGKIQ 103 >gi|260549538|ref|ZP_05823756.1| ferredoxin [Acinetobacter sp. RUH2624] gi|293608589|ref|ZP_06690892.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|260407331|gb|EEX00806.1| ferredoxin [Acinetobacter sp. RUH2624] gi|292829162|gb|EFF87524.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 107 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNAELSQKWPNITQIGDQPADREEWNGKPDKLQ 103 >gi|154246030|ref|YP_001416988.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160115|gb|ABS67331.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 120 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 68/112 (60%), Positives = 77/112 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+NCI CK DCV VCPVDCFYEGEN L I+PDECIDCGVCEPECP AI DT Sbjct: 1 MAYVVTDNCIRCKFMDCVAVCPVDCFYEGENMLVINPDECIDCGVCEPECPAAAIAADTA 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 P W+ +N++YA WPNI KKE AA+ V K+E FSP PG + Sbjct: 61 PEAGPWIALNAQYAALWPNIAEKKEPPADAAQWMDVADKFESAFSPAPGQAD 112 >gi|169632883|ref|YP_001706619.1| 7-Fe ferredoxin [Acinetobacter baumannii SDF] gi|169796509|ref|YP_001714302.1| 7-Fe ferredoxin [Acinetobacter baumannii AYE] gi|184157558|ref|YP_001845897.1| ferredoxin [Acinetobacter baumannii ACICU] gi|239503728|ref|ZP_04663038.1| ferredoxin [Acinetobacter baumannii AB900] gi|260555572|ref|ZP_05827793.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|301347837|ref|ZP_07228578.1| ferredoxin [Acinetobacter baumannii AB056] gi|301511664|ref|ZP_07236901.1| ferredoxin [Acinetobacter baumannii AB058] gi|301597645|ref|ZP_07242653.1| ferredoxin [Acinetobacter baumannii AB059] gi|332853960|ref|ZP_08435080.1| ferredoxin-1 [Acinetobacter baumannii 6013150] gi|332870215|ref|ZP_08439110.1| ferredoxin-1 [Acinetobacter baumannii 6013113] gi|332874292|ref|ZP_08442211.1| ferredoxin-1 [Acinetobacter baumannii 6014059] gi|169149436|emb|CAM87322.1| 7-Fe ferredoxin [Acinetobacter baumannii AYE] gi|169151675|emb|CAP00465.1| 7-Fe ferredoxin [Acinetobacter baumannii] gi|183209152|gb|ACC56550.1| Ferredoxin [Acinetobacter baumannii ACICU] gi|193076943|gb|ABO11677.2| 7-Fe ferredoxin [Acinetobacter baumannii ATCC 17978] gi|260412114|gb|EEX05411.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|332728316|gb|EGJ59697.1| ferredoxin-1 [Acinetobacter baumannii 6013150] gi|332732382|gb|EGJ63639.1| ferredoxin-1 [Acinetobacter baumannii 6013113] gi|332737517|gb|EGJ68425.1| ferredoxin-1 [Acinetobacter baumannii 6014059] Length = 107 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +WPNIT E + +G K + Sbjct: 61 LPEGQEVFIELNAELSQKWPNITQIGEQPADREEWNGKPDKLQ 103 >gi|190573755|ref|YP_001971600.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] gi|254523787|ref|ZP_05135842.1| ferredoxin [Stenotrophomonas sp. SKA14] gi|190011677|emb|CAQ45296.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] gi|219721378|gb|EED39903.1| ferredoxin [Stenotrophomonas sp. SKA14] Length = 107 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CKHTDCVEVCPVDCF+EG NFL I PDECIDC +CEPECPV+AI P+ Sbjct: 1 MPFVVTENCIKCKHTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPVNAIFPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A +WP +T +K+ A + DG K + Sbjct: 61 VPAGQEGFVALNAELAKEWPVLTVRKDPPADAGEWDGKPDKLKLL 105 >gi|294341325|emb|CAZ89740.1| ferredoxin [Thiomonas sp. 3As] Length = 107 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI D Sbjct: 1 MTFVVTENCIKCKFTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E + +WP+IT +K + P + +G K + Sbjct: 61 VPGDQQAFIALNAELSRRWPSITKRKPAPPDGEEWNGKPGKLQ 103 >gi|124266690|ref|YP_001020694.1| ferredoxin [Methylibium petroleiphilum PM1] gi|124259465|gb|ABM94459.1| ferredoxin [Methylibium petroleiphilum PM1] Length = 107 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI P D Sbjct: 1 MTHVVTEACIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAILPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ IN E + +WP+IT +K +LP A K + Sbjct: 61 VPGDQQQFIAINVELSKKWPSITKRKTALPDADDWKDRTDKLGELI 106 >gi|58582544|ref|YP_201560.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624429|ref|YP_451801.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58427138|gb|AAW76175.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368369|dbj|BAE69527.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 107 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E + WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELSKVWPVLTVRQEPLPDAAEWDGKPNKLPLL 105 >gi|332527731|ref|ZP_08403772.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Rubrivivax benzoatilyticus JA2] gi|332112129|gb|EGJ12105.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Rubrivivax benzoatilyticus JA2] Length = 107 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VV ++CI CK+TDCV+VCPVDCF EG NFL I P+ECIDC VC PECP +AI P D Sbjct: 1 MTHVVLDSCIRCKYTDCVDVCPVDCFREGPNFLVIDPEECIDCAVCIPECPANAILPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++N+E A WP+IT +K SLP A + K K + Sbjct: 61 VPADQLQFIQLNAELAKTWPSITKRKASLPDADEWKDRKNKLQ 103 >gi|220934455|ref|YP_002513354.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995765|gb|ACL72367.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 107 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VV ENCI CK+TDCVEVCPVDCF+EG NFL I P+ECIDC +CEPECP +AI P+ Sbjct: 1 MTFVVIENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPEECIDCTLCEPECPAEAIVPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E +L++N+E + QWP ITT+KE A + DG K + Sbjct: 61 IPEGQEDFLELNAELSRQWPVITTRKEPPADAEEWDGKPDKLK 103 >gi|30248037|ref|NP_840107.1| 7Fe ferredoxin [Nitrosomonas europaea ATCC 19718] gi|30179922|emb|CAD83917.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Nitrosomonas europaea ATCC 19718] Length = 107 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E + W I KK++LP A + V K +K Sbjct: 61 VPEDQRQFIALNAELSKIWDPIIEKKDALPDADEWASVTDKLDKL 105 >gi|262369723|ref|ZP_06063051.1| 7-Fe ferredoxin [Acinetobacter johnsonii SH046] gi|262315791|gb|EEY96830.1| 7-Fe ferredoxin [Acinetobacter johnsonii SH046] Length = 107 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNAELSQTWPNITQIGDQPADREEWNGKADKLQ 103 >gi|296135523|ref|YP_003642765.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295795645|gb|ADG30435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 107 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI D Sbjct: 1 MTFVVTENCIRCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++K+N+E + QWP+IT +K + A + K + Sbjct: 61 VPGDQQAFIKLNAELSRQWPSITKRKAAPDDADEWKDKPDKLQ 103 >gi|50084667|ref|YP_046177.1| 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|262278522|ref|ZP_06056307.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus RUH2202] gi|299770827|ref|YP_003732853.1| ferredoxin [Acinetobacter sp. DR1] gi|15217085|gb|AAK92496.1|AF400582_5 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|49530643|emb|CAG68355.1| 7-Fe ferredoxin [Acinetobacter sp. ADP1] gi|262258873|gb|EEY77606.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus RUH2202] gi|298700915|gb|ADI91480.1| ferredoxin [Acinetobacter sp. DR1] Length = 107 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGDQPADREEWNGKPDKLQ 103 >gi|148260834|ref|YP_001234961.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|326404228|ref|YP_004284310.1| ferredoxin [Acidiphilium multivorum AIU301] gi|146402515|gb|ABQ31042.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] gi|325051090|dbj|BAJ81428.1| ferredoxin [Acidiphilium multivorum AIU301] Length = 110 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 62/111 (55%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE+CI CK+ DCVEVCPVDCFY GEN L IHPDECIDCGVCEPECP +AI PD++ Sbjct: 1 MAYVVTESCIKCKYMDCVEVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAEAIVPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + W+ N E A WPNIT K A K S PG Sbjct: 61 AKADAWIDQNRELAALWPNITRKGTPPEDADAWKDRPGKAASL-SREPGTP 110 >gi|255319931|ref|ZP_05361131.1| ferredoxin-1 [Acinetobacter radioresistens SK82] gi|262379624|ref|ZP_06072780.1| ferredoxin [Acinetobacter radioresistens SH164] gi|255302951|gb|EET82168.1| ferredoxin-1 [Acinetobacter radioresistens SK82] gi|262299081|gb|EEY86994.1| ferredoxin [Acinetobacter radioresistens SH164] Length = 107 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT E + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGEQPADREEWNGKPDKLQ 103 >gi|294339652|emb|CAZ88012.1| Ferredoxin [Thiomonas sp. 3As] Length = 107 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC PECP +AI D Sbjct: 1 MTFVVTENCIRCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++K+N+E + QWP+IT +K + A + K + Sbjct: 61 VPGDQQAFIKLNAELSRQWPSITKRKAAPDDADEWKDKPDKLQ 103 >gi|15640822|ref|NP_230453.1| ferredoxin [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585764|ref|ZP_01675559.1| ferredoxin [Vibrio cholerae 2740-80] gi|121725986|ref|ZP_01679285.1| ferredoxin [Vibrio cholerae V52] gi|147673974|ref|YP_001216287.1| ferredoxin [Vibrio cholerae O395] gi|153800583|ref|ZP_01955169.1| ferredoxin [Vibrio cholerae MZO-3] gi|153817247|ref|ZP_01969914.1| ferredoxin [Vibrio cholerae NCTC 8457] gi|153821403|ref|ZP_01974070.1| ferredoxin [Vibrio cholerae B33] gi|153824599|ref|ZP_01977266.1| ferredoxin [Vibrio cholerae MZO-2] gi|153828258|ref|ZP_01980925.1| ferredoxin [Vibrio cholerae 623-39] gi|227080983|ref|YP_002809534.1| ferredoxin [Vibrio cholerae M66-2] gi|229505581|ref|ZP_04395091.1| ferredoxin [Vibrio cholerae BX 330286] gi|229510747|ref|ZP_04400226.1| ferredoxin [Vibrio cholerae B33] gi|229513058|ref|ZP_04402524.1| ferredoxin [Vibrio cholerae TMA 21] gi|229517868|ref|ZP_04407312.1| ferredoxin [Vibrio cholerae RC9] gi|229525447|ref|ZP_04414852.1| ferredoxin [Vibrio cholerae bv. albensis VL426] gi|229530070|ref|ZP_04419460.1| ferredoxin [Vibrio cholerae 12129(1)] gi|229608599|ref|YP_002879247.1| ferredoxin [Vibrio cholerae MJ-1236] gi|254285518|ref|ZP_04960482.1| ferredoxin [Vibrio cholerae AM-19226] gi|254847941|ref|ZP_05237291.1| ferredoxin [Vibrio cholerae MO10] gi|258627223|ref|ZP_05722011.1| Ferredoxin [Vibrio mimicus VM603] gi|297581203|ref|ZP_06943127.1| ferredoxin [Vibrio cholerae RC385] gi|298499064|ref|ZP_07008871.1| ferredoxin [Vibrio cholerae MAK 757] gi|9655253|gb|AAF93968.1| ferredoxin [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550127|gb|EAX60143.1| ferredoxin [Vibrio cholerae 2740-80] gi|121631468|gb|EAX63838.1| ferredoxin [Vibrio cholerae V52] gi|124123872|gb|EAY42615.1| ferredoxin [Vibrio cholerae MZO-3] gi|126512163|gb|EAZ74757.1| ferredoxin [Vibrio cholerae NCTC 8457] gi|126521113|gb|EAZ78336.1| ferredoxin [Vibrio cholerae B33] gi|146315857|gb|ABQ20396.1| ferredoxin [Vibrio cholerae O395] gi|148876212|gb|EDL74347.1| ferredoxin [Vibrio cholerae 623-39] gi|149741817|gb|EDM55846.1| ferredoxin [Vibrio cholerae MZO-2] gi|150424380|gb|EDN16317.1| ferredoxin [Vibrio cholerae AM-19226] gi|227008871|gb|ACP05083.1| ferredoxin [Vibrio cholerae M66-2] gi|227012628|gb|ACP08838.1| ferredoxin [Vibrio cholerae O395] gi|229333844|gb|EEN99330.1| ferredoxin [Vibrio cholerae 12129(1)] gi|229339028|gb|EEO04045.1| ferredoxin [Vibrio cholerae bv. albensis VL426] gi|229344583|gb|EEO09557.1| ferredoxin [Vibrio cholerae RC9] gi|229349951|gb|EEO14905.1| ferredoxin [Vibrio cholerae TMA 21] gi|229350712|gb|EEO15653.1| ferredoxin [Vibrio cholerae B33] gi|229357804|gb|EEO22721.1| ferredoxin [Vibrio cholerae BX 330286] gi|229371254|gb|ACQ61677.1| ferredoxin [Vibrio cholerae MJ-1236] gi|254843646|gb|EET22060.1| ferredoxin [Vibrio cholerae MO10] gi|258580525|gb|EEW05486.1| Ferredoxin [Vibrio mimicus VM603] gi|297534519|gb|EFH73356.1| ferredoxin [Vibrio cholerae RC385] gi|297543397|gb|EFH79447.1| ferredoxin [Vibrio cholerae MAK 757] gi|327483585|gb|AEA77992.1| ferredoxin [Vibrio cholerae LMA3894-4] Length = 107 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 70/105 (66%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WPN+T K ++ AAK DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKLDML 105 >gi|166711847|ref|ZP_02243054.1| ferredoxin [Xanthomonas oryzae pv. oryzicola BLS256] gi|289662698|ref|ZP_06484279.1| ferredoxin [Xanthomonas campestris pv. vasculorum NCPPB702] gi|325924485|ref|ZP_08186004.1| ferredoxin [Xanthomonas gardneri ATCC 19865] gi|325544980|gb|EGD16315.1| ferredoxin [Xanthomonas gardneri ATCC 19865] Length = 107 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEPLPDAAEWDGKPNKLPLL 105 >gi|171059471|ref|YP_001791820.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170776916|gb|ACB35055.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 107 Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI P D Sbjct: 1 MTHVVTESCIRCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAILPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ IN+E + +WP+IT +K +LP A + K K + Sbjct: 61 VPADQMKFIAINAELSPKWPSITKRKAALPDADEWKDRKDKLGEL 105 >gi|88813310|ref|ZP_01128549.1| ferrodoxin [Nitrococcus mobilis Nb-231] gi|88789482|gb|EAR20610.1| ferrodoxin [Nitrococcus mobilis Nb-231] Length = 108 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTE CI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +C PECPV+AI D Sbjct: 1 MTYVVTERCIRCKYTDCVEVCPVDCFHEGRNFLVIDPDECIDCALCVPECPVEAIYADDR 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E + ++N++ A WP IT +K + A + K Sbjct: 61 LPEGQERFFELNAQLARAWPVITRRKPAPADAEEWREATDKL 102 >gi|94311387|ref|YP_584597.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93355239|gb|ABF09328.1| Ferredoxin [Cupriavidus metallidurans CH34] Length = 107 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E + WP+IT K L A + K + Sbjct: 61 VPGDQQQFIELNAELSRIWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|88857416|ref|ZP_01132059.1| putative ferredoxin [Pseudoalteromonas tunicata D2] gi|88820613|gb|EAR30425.1| putative ferredoxin [Pseudoalteromonas tunicata D2] Length = 121 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VV +NCI CK+TDCV VCPVD F+EG NFLAI P CIDCG+CEPECP +AI + Sbjct: 15 MAFVVGDNCIKCKYTDCVAVCPVDAFFEGPNFLAISPIICIDCGLCEPECPAEAIFQEDA 74 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +L++N+E A WPNIT K A +GVK K + Sbjct: 75 LPAEQHQYLELNAELAEIWPNITQVKTPPADADSWNGVKDKLK 117 >gi|237745589|ref|ZP_04576069.1| ferredoxin-1 [Oxalobacter formigenes HOxBLS] gi|229376940|gb|EEO27031.1| ferredoxin-1 [Oxalobacter formigenes HOxBLS] Length = 107 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT+ C+LCK+TDCV+VCPVDCF+EG N L I+P+ECIDC VC PECP +AI D Sbjct: 1 MTHVVTDACVLCKYTDCVDVCPVDCFHEGPNTLVINPNECIDCAVCVPECPSEAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N+E + +WP IT K+ LP A K VK K Sbjct: 61 VPADQQEYIALNAELSRKWPTITRSKDPLPDADKWKDVKNKIIHLI 106 >gi|21231193|ref|NP_637110.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768799|ref|YP_243561.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|188991913|ref|YP_001903923.1| hypothetical protein xccb100_2518 [Xanthomonas campestris pv. campestris str. B100] gi|21112835|gb|AAM41034.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574131|gb|AAY49541.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|167733673|emb|CAP51878.1| fdx [Xanthomonas campestris pv. campestris] Length = 107 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHAGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A WP +T ++E LP AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTVRQEPLPDAAEWDGKPDKLPLL 105 >gi|285017975|ref|YP_003375686.1| ferredoxin protein [Xanthomonas albilineans GPE PC73] gi|283473193|emb|CBA15699.1| putative ferredoxin protein [Xanthomonas albilineans] Length = 107 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHAGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP +TT++E L AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTTRQEPLADAAEWDGKPNKL 102 >gi|262376219|ref|ZP_06069449.1| 7-Fe ferredoxin [Acinetobacter lwoffii SH145] gi|262308820|gb|EEY89953.1| 7-Fe ferredoxin [Acinetobacter lwoffii SH145] Length = 107 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 G E+++++N++ + +WPNIT + + +G K + Sbjct: 61 LPEGQEVFIELNADLSQKWPNITQIGDQPADREEWNGKADKLQ 103 >gi|325982038|ref|YP_004294440.1| Ferredoxin, C-terminal protein [Nitrosomonas sp. AL212] gi|325531557|gb|ADZ26278.1| Ferredoxin, C-terminal protein [Nitrosomonas sp. AL212] Length = 107 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI D Sbjct: 1 MAYVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E + +W I KK++LP A VK K ++ Sbjct: 61 VPDEQTHFISLNAELSKEWRPIIEKKDALPDADDWASVKDKLDQL 105 >gi|257094884|ref|YP_003168525.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047408|gb|ACV36596.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 107 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTE+CI CK TDCV+VCPVDCF+EG NFL I PDECIDC +C PECP +AI D Sbjct: 1 MAYVVTESCIKCKFTDCVDVCPVDCFHEGPNFLVIDPDECIDCTLCVPECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E A WP I +K+ LP A + +G K + Sbjct: 61 VPDTQRAFIALNAELAKAWPTIVERKDPLPDADEWNGRADKLK 103 >gi|289669666|ref|ZP_06490741.1| ferredoxin [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 107 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A WP +T ++E+LP AA+ DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEALPDAAEWDGKPNKLPLL 105 >gi|119897322|ref|YP_932535.1| ferredoxin [Azoarcus sp. BH72] gi|119669735|emb|CAL93648.1| probable ferredoxin [Azoarcus sp. BH72] Length = 107 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTE+CI CK+TDCV+VCPVDCF EGENFL I P+ECIDC +C ECPV+AI D Sbjct: 1 MAYVVTESCIRCKYTDCVDVCPVDCFREGENFLVIDPEECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+E A W I +KE LP A + VK K Sbjct: 61 VPADQQQFIALNAELARTWKPIVERKEPLPDAEQWAKVKGK 101 >gi|91983712|gb|ABE68862.1| FdxA [Pseudomonas sp. Q12-87] Length = 104 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 78/102 (76%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 102 >gi|325917219|ref|ZP_08179445.1| ferredoxin [Xanthomonas vesicatoria ATCC 35937] gi|325536560|gb|EGD08330.1| ferredoxin [Xanthomonas vesicatoria ATCC 35937] Length = 107 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A WP +T ++E LP AA DG K Sbjct: 61 VPAGQEGFVALNAELAKAWPVLTVRQEPLPDAADWDGKPNKLPLL 105 >gi|83647900|ref|YP_436335.1| ferredoxin [Hahella chejuensis KCTC 2396] gi|83635943|gb|ABC31910.1| Ferredoxin [Hahella chejuensis KCTC 2396] Length = 107 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCFYEG NFL I PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFYEGPNFLVIDPDECIDCALCEPECPAEAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++ +N E WPNIT KK++ A GVK K + Sbjct: 61 LPEDQKEFIALNEELCRVWPNITEKKDAPADADDWKGVKGKLKDL 105 >gi|237653740|ref|YP_002890054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237624987|gb|ACR01677.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 107 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE CI CK+TDCV+VCPVDCF EG NFL I P+ECIDC +C ECPV+AI D Sbjct: 1 MTYVVTERCIRCKYTDCVDVCPVDCFREGPNFLVIDPEECIDCTLCVAECPVEAIYSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++ +N+E A QW I +K+ LP A +K K + Sbjct: 61 VPDDQKGYIALNAELAKQWKPIVERKDPLPDADHWARIKGKLGEL 105 >gi|289208208|ref|YP_003460274.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288943839|gb|ADC71538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 107 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M ++V ENCI CK+TDCVEVCPVDCF+EG NFLAI PDECIDC +CEPECP +AI P+ Sbjct: 1 MAFIVLENCIKCKYTDCVEVCPVDCFHEGPNFLAIDPDECIDCTLCEPECPAEAIVPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E + WP IT +K+ A + DGV+ K + Sbjct: 61 VPEDQLQFIELNAELSRTWPVITARKDPPEDAEEWDGVEGKLKHL 105 >gi|292492665|ref|YP_003528104.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291581260|gb|ADE15717.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 112 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI + + Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 E +LK+N+E A WP IT KE A + D +K Sbjct: 61 LPEEHRNYLKLNAELARNWPVITESKEPPSDADQWDRIKN 100 >gi|300310955|ref|YP_003775047.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] gi|300073740|gb|ADJ63139.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 107 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT++C+ C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTDSCVRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E + WP+IT K LP A + K + Sbjct: 61 VPADQQQYIALNAELSRSWPSITKTKAPLPEAEEWKDKTDKLQ 103 >gi|153005139|ref|YP_001379464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028712|gb|ABS26480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 108 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVV E CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDCG CEP CP AI P+ Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCGACEPACPTKAIFPEES 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N++ WPNI+ KK+ LP A + V++K + Sbjct: 61 LPAKWKEYTQLNADLCKTWPNISEKKDPLPDADQWKDVEEKRQ 103 >gi|114330158|ref|YP_746380.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosomonas eutropha C91] gi|114307172|gb|ABI58415.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nitrosomonas eutropha C91] Length = 107 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +C ECPV+AI + + Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPVEAIYAEDD 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E + W I KK++LP A + V K + Sbjct: 61 VAEDQRRFIALNAELSKIWEPIIEKKDALPDADEWASVTDKLDHL 105 >gi|119504839|ref|ZP_01626917.1| RecA DNA recombination protein [marine gamma proteobacterium HTCC2080] gi|119459444|gb|EAW40541.1| RecA DNA recombination protein [marine gamma proteobacterium HTCC2080] Length = 107 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 64/105 (60%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP+DAI + E Sbjct: 1 MTFVVGEDCINCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPIDAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E +L +N+E A WPNIT KK +L A G K Sbjct: 61 LPAGQEQFLALNTELADIWPNITEKKPALEDAEAWTGKSDKLPLL 105 >gi|326317032|ref|YP_004234704.1| ferredoxin, C-terminal protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373868|gb|ADX46137.1| Ferredoxin, C-terminal protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 107 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++K+N+E A QW +IT +K SLP A + +G K + Sbjct: 61 LPADQQAFIKLNAELAPQWKSITKRKASLPDADEWNGKPGKIAELV 106 >gi|40062704|gb|AAR37617.1| ferredoxin [uncultured marine bacterium 314] Length = 113 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 3/114 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V +NCI CK DCV+VCPVDCFYEGEN LAI PDECIDCGVCEPECP+DAIKPDT+ Sbjct: 1 MTYIVNDNCIKCKLMDCVDVCPVDCFYEGENMLAIKPDECIDCGVCEPECPIDAIKPDTD 60 Query: 61 PGLELWLKINSEYATQWPNITTKK--ESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 G W++ N++Y WPNIT K+ + K GVK K KYFS PG + Sbjct: 61 EGASDWVEHNTKYGDLWPNITKKRSEDVPHDQEKWRGVKDKL-KYFSEKPGKGD 113 >gi|30580420|sp|Q44037|FER1_AFIFE RecName: Full=Ferredoxin-1 gi|550302|emb|CAA57420.1| ferredoxin [Afipia felis] Length = 93 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 69/93 (74%), Positives = 76/93 (81%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 LE WL +N+EYA WPNIT KK++ A + Sbjct: 61 QNLEKWLGVNAEYAKTWPNITQKKDAPADAKEF 93 >gi|170745425|ref|YP_001766882.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170659026|gb|ACB28080.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 112 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 70/104 (67%), Positives = 75/104 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFY GE L I PDECIDCGVCEPECP DAIK DTE Sbjct: 1 MTYVVTENCIRCKYTDCVEVCPVDCFYVGETMLVIDPDECIDCGVCEPECPADAIKADTE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PGLE W N++YA WPNI K + AA+ DG K F Sbjct: 61 PGLEGWKAFNAKYAALWPNIAEKVDPAADAAEWDGRDGKLIAVF 104 >gi|229523379|ref|ZP_04412786.1| ferredoxin [Vibrio cholerae TM 11079-80] gi|229339742|gb|EEO04757.1| ferredoxin [Vibrio cholerae TM 11079-80] Length = 107 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WPN+T K ++ A K DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEDAVKWDGVPNKLDML 105 >gi|258619992|ref|ZP_05715032.1| Ferredoxin [Vibrio mimicus VM573] gi|258587725|gb|EEW12434.1| Ferredoxin [Vibrio mimicus VM573] Length = 107 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECTAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WPN+T K ++ A+K DGV K + Sbjct: 61 LVGDQRIFIELNAELAEHWPNLTEVKPAMEEASKWDGVPNKLDML 105 >gi|91784742|ref|YP_559948.1| putative ferredoxin [Burkholderia xenovorans LB400] gi|296158268|ref|ZP_06841100.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] gi|91688696|gb|ABE31896.1| Putative ferredoxin [Burkholderia xenovorans LB400] gi|295891604|gb|EFG71390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] Length = 107 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++++N++ A WP+IT K LP A + VK K E Sbjct: 61 VPGDQQNFIELNADLAKSWPSITKTKAPLPEADEFKDVKDKLELLV 106 >gi|300021613|ref|YP_003754224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523434|gb|ADJ21903.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 114 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 69/114 (60%), Positives = 80/114 (70%), Gaps = 2/114 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDCVEVCPVDCFYEGEN L IHPDECIDCGVC PECP +AI D E Sbjct: 1 MTYVVTENCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCVPECPAEAIFSDAE 60 Query: 61 PGL-ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 P WL +N ++A QWPNI KK ++P A +G K + FSP ++ Sbjct: 61 PQATAHWLDLNRKHADQWPNIVAKKAAMPDADAENGRAGKAAE-FSPEAATEDA 113 >gi|221134033|ref|ZP_03560338.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Glaciecola sp. HTCC2999] Length = 108 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +C PECP DAI D + Sbjct: 1 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCELCVPECPADAIVQDEK 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 P +L++N+E A QWPNI K + A K +GV K Sbjct: 61 ISPDQAQFLELNAELAKQWPNINEMKPAPADADKWNGVANKIPLLL 106 >gi|120611719|ref|YP_971397.1| 4Fe-4S ferredoxin [Acidovorax citrulli AAC00-1] gi|120590183|gb|ABM33623.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax citrulli AAC00-1] Length = 107 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++K+N+E A QW +IT +K SLP A + +G K Sbjct: 61 LPADQQAFIKLNAELAPQWKSITKRKASLPDADEWNGKPGKIADLI 106 >gi|91983682|gb|ABE68847.1| FdxA [Pseudomonas sp. Q65c-80] gi|91983716|gb|ABE68864.1| FdxA [Pseudomonas sp. TM1A3] gi|91983718|gb|ABE68865.1| FdxA [Pseudomonas sp. C*1A1] gi|91983720|gb|ABE68866.1| FdxA [Pseudomonas sp. TM1B2] gi|91983732|gb|ABE68872.1| FdxA [Pseudomonas sp. K93.3] gi|91983734|gb|ABE68873.1| FdxA [Pseudomonas sp. P96.25] Length = 104 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 78/102 (76%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 102 >gi|291613179|ref|YP_003523336.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291583291|gb|ADE10949.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 107 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTENCI CK+TDCV+VCPVDCF+EG NFL I P ECIDC +C ECP +AI D Sbjct: 1 MAYVVTENCIKCKYTDCVDVCPVDCFHEGPNFLVIDPGECIDCTLCVAECPANAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++ +N+E A QW I KK + A + VK K Sbjct: 61 VPVDQRQFIALNAELAKQWKVIVEKKAAPADADEWRDVKDKL 102 >gi|134094047|ref|YP_001099122.1| 7-Fe ferredoxin [Herminiimonas arsenicoxydans] gi|133737950|emb|CAL60995.1| Ferredoxin-1 (Ferredoxin I) (FdI) [Herminiimonas arsenicoxydans] Length = 107 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT++C+LC++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTDSCVLCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++K+N E + WP+IT K LP A + K + Sbjct: 61 VPADQQHYIKLNVELSRNWPSITKTKAPLPEAEEWKDKTDKLQ 103 >gi|157376399|ref|YP_001474999.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318773|gb|ABV37871.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 107 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVT+NCI CK+TDCV VCPVD F+EG NFLAI+P+ CIDC +C PEC AI + Sbjct: 1 MAFVVTDNCIRCKYTDCVAVCPVDAFHEGPNFLAINPEVCIDCDLCVPECAAQAIFQEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 G+E +L++N+E A WP IT KE+ A + DGVK K E Sbjct: 61 LPEGMEQYLELNAELAQIWPVITEVKEAPADAEEWDGVKNKREHLI 106 >gi|300112903|ref|YP_003759478.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Nitrosococcus watsonii C-113] gi|299538840|gb|ADJ27157.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus watsonii C-113] Length = 112 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI D Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 + +L+IN+E A WP IT KE A + D +K Sbjct: 61 VPKEHQKYLEINAELARSWPVITESKEPPADADQWDRIKN 100 >gi|91776028|ref|YP_545784.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91710015|gb|ABE49943.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 107 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI D Sbjct: 1 MAYVVTENCIQCKYTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++++N+ A WP+IT +K LP A +GV K Sbjct: 61 VPEDQQEFIELNARLAQIWPSITARKAPLPDADANNGVPGKRSLLI 106 >gi|187924909|ref|YP_001896551.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] gi|187716103|gb|ACD17327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] Length = 107 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++++N+E A WP+IT K LP A + VK+K E Sbjct: 61 VPGDQQNFIELNAELAKNWPSITKTKAPLPEADEFKDVKEKLELL 105 >gi|88798288|ref|ZP_01113874.1| ferrodoxin, 4Fe-4S [Reinekea sp. MED297] gi|88779064|gb|EAR10253.1| ferrodoxin, 4Fe-4S [Reinekea sp. MED297] Length = 107 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV ENCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + + Sbjct: 1 MAFVVIENCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAEAILSEDE 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT +K+ LP A + +GV K + Sbjct: 61 VPADQIDFIELNAELAEVWPNITEQKDPLPDADEQNGVPNKRTEL 105 >gi|108762705|ref|YP_631259.1| ferrodoxin, 4Fe-4S [Myxococcus xanthus DK 1622] gi|108466585|gb|ABF91770.1| ferrodoxin, 4Fe-4S [Myxococcus xanthus DK 1622] Length = 111 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 60/112 (53%), Positives = 73/112 (65%), Gaps = 3/112 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV + CI CK+TDCVEVCPV+CFYEG NFL IHPDECIDCG CEP CP AI P+TE Sbjct: 1 MAYVVADPCIKCKYTDCVEVCPVNCFYEGANFLVIHPDECIDCGACEPVCPTKAIFPETE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + + +N++ +T+WPNI KK +LP A + K P PG Sbjct: 61 LPEQWKEYKALNADLSTKWPNIAEKKSALPEAEEFKSKDGKR-SLLDPAPGS 111 >gi|302879644|ref|YP_003848208.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302582433|gb|ADL56444.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gallionella capsiferriformans ES-2] Length = 107 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVV+ENCI CK TDCV+VCPVDCF EG NFL I PDECIDC +C ECP +AI + Sbjct: 1 MTYVVSENCIKCKFTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCVAECPAEAIFAEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + +N+E + W I KK+ A + GVK K Sbjct: 61 LPADQTHFTALNAELSKLWGVIVEKKDPPADAEEWQGVKDKLHLL 105 >gi|119476595|ref|ZP_01616905.1| 7-Fe ferredoxin [marine gamma proteobacterium HTCC2143] gi|119449851|gb|EAW31087.1| 7-Fe ferredoxin [marine gamma proteobacterium HTCC2143] Length = 107 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEQCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIYSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++++N+E A WPNIT K A + K E Sbjct: 61 LPEDQQVFMELNTELAEVWPNITEIKAPPADAEEWAHKPNKLELL 105 >gi|73541973|ref|YP_296493.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72119386|gb|AAZ61649.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 107 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFIDLNAELARNWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|113868553|ref|YP_727042.1| ferredoxin [Ralstonia eutropha H16] gi|113527329|emb|CAJ93674.1| Ferredoxin [Ralstonia eutropha H16] Length = 107 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFINLNAELARNWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|109896757|ref|YP_660012.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas atlantica T6c] gi|109699038|gb|ABG38958.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudoalteromonas atlantica T6c] Length = 107 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VVT+NCI CK+TDCV VCPVD F+EG NFL I PD CIDC +CEPECP AI D Sbjct: 1 MTFVVTDNCIKCKYTDCVAVCPVDAFFEGPNFLVIDPDICIDCALCEPECPAKAIFQDDK 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 PG E + ++N+E + WPNI A + DGV K E Sbjct: 61 LPPGQEAFNELNAELSKIWPNIIEVIPPPADAKEWDGVPNKIE 103 >gi|91983728|gb|ABE68870.1| FdxA [Pseudomonas sp. P97.6] Length = 104 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 GQENFIELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 102 >gi|194290186|ref|YP_002006093.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193224021|emb|CAQ70030.1| putative FERREDOXIN PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 107 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIRCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E A WP+IT K L A + K + Sbjct: 61 VPGDQQQFIELNAELARAWPSITKTKAPLAEAEEWKDATDKLQ 103 >gi|262277940|ref|ZP_06055733.1| ferredoxin-1 (Ferredoxin I) (FdI) [alpha proteobacterium HIMB114] gi|262225043|gb|EEY75502.1| ferredoxin-1 (Ferredoxin I) (FdI) [alpha proteobacterium HIMB114] Length = 107 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 67/107 (62%), Positives = 78/107 (72%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+V E CI CK TDCV+VCPVDCFYEGEN L I+PDECIDCGVCEPECP+DAI+PDT Sbjct: 1 MTYIVNEKCIKCKLTDCVDVCPVDCFYEGENMLVINPDECIDCGVCEPECPIDAIEPDTN 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 +E L +N EY+ +WPNI+ KKE L K K K+ KYF Sbjct: 61 ANVEEMLLVNKEYSLKWPNISKKKEPLNDWEKYKDEKDKFNKYFEKK 107 >gi|91783228|ref|YP_558434.1| putative 4Fe-4S ferredoxin [Burkholderia xenovorans LB400] gi|91687182|gb|ABE30382.1| Putative 4Fe-4S ferredoxin [Burkholderia xenovorans LB400] Length = 107 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIQCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++K+N+E A +WP IT K L A + VK K+ Sbjct: 61 VPRDQRHFIKLNAELARRWPGITKTKAPLAEADRFKDVKDKF 102 >gi|91983674|gb|ABE68843.1| FdxA [Pseudomonas protegens] gi|91983704|gb|ABE68858.1| FdxA [Pseudomonas protegens] gi|91983706|gb|ABE68859.1| FdxA [Pseudomonas sp. K94.41] gi|91983708|gb|ABE68860.1| FdxA [Pseudomonas sp. S8-62] gi|91983722|gb|ABE68867.1| FdxA [Pseudomonas protegens] gi|91983724|gb|ABE68868.1| FdxA [Pseudomonas protegens] Length = 104 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPE 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KK+ LP A + DGVK K + Sbjct: 61 EMQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGKIKDL 102 >gi|198282163|ref|YP_002218484.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666462|ref|YP_002424528.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246684|gb|ACH82277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518675|gb|ACK79261.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 108 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+TDC EVCPV+CF+EG NFL I P ECIDC C PECP DAI D E Sbjct: 1 MTYVVTENCIQCKYTDCAEVCPVECFHEGPNFLVIDPVECIDCAACVPECPADAIFADDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P + IN+E A WP I KK +LP A +G K Sbjct: 61 VPPDQRDFTAINAELARDWPVILRKKAALPDAETWNGKGDKRPLL 105 >gi|56478120|ref|YP_159709.1| ferredoxin [Aromatoleum aromaticum EbN1] gi|56314163|emb|CAI08808.1| Ferredoxin [Aromatoleum aromaticum EbN1] Length = 107 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE CI CK+TDCV+VCPVDCF EG NFLAI P ECIDC +C ECPV+AI D Sbjct: 1 MTYVVTEACIRCKYTDCVDVCPVDCFREGANFLAIDPTECIDCTLCVAECPVEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G ++ +N+E A QW I +K+ LP A + K ++ Sbjct: 61 VPEGQRHFIALNAELAQQWKPIVERKDPLPDADEWAKRTGKLDEL 105 >gi|21242508|ref|NP_642090.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|78047349|ref|YP_363524.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294626612|ref|ZP_06705209.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666343|ref|ZP_06731591.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927274|ref|ZP_08188530.1| ferredoxin [Xanthomonas perforans 91-118] gi|21107958|gb|AAM36626.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|78035779|emb|CAJ23470.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292599032|gb|EFF43172.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603892|gb|EFF47295.1| ferredoxin [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325542350|gb|EGD13836.1| ferredoxin [Xanthomonas perforans 91-118] Length = 107 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTENCI CK+TDCVEVCPVDCF+ G NFL I PDECIDC +CEPECP +AI P+ Sbjct: 1 MPFVVTENCIKCKYTDCVEVCPVDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G E ++ +N+E A WP +T ++E P AA+ DG K Sbjct: 61 VPAGQEAFVALNAELAKAWPVLTVRQEPAPDAAEWDGKPNKLPLL 105 >gi|160900089|ref|YP_001565671.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160365673|gb|ABX37286.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Delftia acidovorans SPH-1] Length = 109 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYA--TQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++K+N+E + W +IT +K SLP A +G K ++ Sbjct: 61 VPADQLAFIKLNAELSLEKGWKSITKRKASLPDADDWNGKPGKLDQL 107 >gi|297538391|ref|YP_003674160.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera sp. 301] gi|297257738|gb|ADI29583.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera sp. 301] Length = 107 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTENCI CK TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI D Sbjct: 1 MTYVVTENCIQCKFTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N+ A WP IT++K +L A M+GV K + Sbjct: 61 VPADQQEFIALNARLAELWPVITSRKAALEDAEAMNGVPGKRDLLI 106 >gi|187477594|ref|YP_785618.1| ferredoxin [Bordetella avium 197N] gi|115422180|emb|CAJ48704.1| ferredoxin [Bordetella avium 197N] Length = 107 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E + ++ +I+ K+ LP A + +GV+ K + Sbjct: 61 VPQDQMKFIALNAELSAEFASISRAKKPLPDADEWNGVQDKLQHL 105 >gi|15839190|ref|NP_299878.1| ferredoxin [Xylella fastidiosa 9a5c] gi|9107823|gb|AAF85398.1|AE004067_5 ferredoxin [Xylella fastidiosa 9a5c] Length = 107 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCINCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + + +N+E A WP +T ++E +P AA+ DG K Sbjct: 61 VPTEQKQCIALNAELAKAWPVVTVRREPMPDAAEWDGKPDKL 102 >gi|91983730|gb|ABE68871.1| FdxA [Pseudomonas sp. P97.26] Length = 104 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP-- 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPT 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT +K++LP AA+ DG K Sbjct: 61 GMENFIELNAELADIWPNITERKDALPDAAEWDGKPGKIADL 102 >gi|34498889|ref|NP_903104.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34104740|gb|AAQ61097.1| ferredoxin [Chromobacterium violaceum ATCC 12472] Length = 107 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 58/102 (56%), Positives = 68/102 (66%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVT+ CI CK+TDCVEVCPVDCF EG NFLAI PDECIDC +C PECPV AI D Sbjct: 1 MAYVVTDACIKCKYTDCVEVCPVDCFREGPNFLAIDPDECIDCSLCVPECPVGAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G E ++ +N+E A WP+I + + LP A VK K Sbjct: 61 VPKGQEAFIALNAELAKNWPSIVERIDPLPDHADWADVKDKL 102 >gi|107022176|ref|YP_620503.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia AU 1054] gi|116689122|ref|YP_834745.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia HI2424] gi|170732410|ref|YP_001764357.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia MC0-3] gi|105892365|gb|ABF75530.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia cenocepacia AU 1054] gi|116647211|gb|ABK07852.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia cenocepacia HI2424] gi|169815652|gb|ACA90235.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia cenocepacia MC0-3] Length = 107 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|28199843|ref|NP_780157.1| ferredoxin [Xylella fastidiosa Temecula1] gi|71275225|ref|ZP_00651512.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Dixon] gi|71899554|ref|ZP_00681710.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|71899939|ref|ZP_00682086.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|170731220|ref|YP_001776653.1| ferredoxin [Xylella fastidiosa M12] gi|182682594|ref|YP_001830754.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xylella fastidiosa M23] gi|28057964|gb|AAO29806.1| ferredoxin [Xylella fastidiosa Temecula1] gi|71164034|gb|EAO13749.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Dixon] gi|71730302|gb|EAO32386.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|71730683|gb|EAO32758.1| 4Fe-4S ferredoxin, iron-sulfur binding [Xylella fastidiosa Ann-1] gi|167966013|gb|ACA13023.1| ferredoxin [Xylella fastidiosa M12] gi|182632704|gb|ACB93480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xylella fastidiosa M23] gi|307578876|gb|ADN62845.1| ferredoxin [Xylella fastidiosa subsp. fastidiosa GB514] Length = 107 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI P D Sbjct: 1 MPFVVTENCINCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + + +N+E A WP +T ++E +P AA+ +G K Sbjct: 61 VPTEQKQCIALNAELAKAWPVVTVRREPMPDAAEWNGKPDKL 102 >gi|91983710|gb|ABE68861.1| FdxA [Pseudomonas sp. Q13-87] gi|91983726|gb|ABE68869.1| FdxA [Pseudomonas sp. Q7-87] Length = 104 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 102 >gi|83720589|ref|YP_442231.1| ferredoxin [Burkholderia thailandensis E264] gi|167581116|ref|ZP_02373990.1| ferredoxin [Burkholderia thailandensis TXDOH] gi|167619199|ref|ZP_02387830.1| ferredoxin [Burkholderia thailandensis Bt4] gi|257138424|ref|ZP_05586686.1| ferredoxin [Burkholderia thailandensis E264] gi|83654414|gb|ABC38477.1| ferredoxin [Burkholderia thailandensis E264] Length = 107 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNAELAKAWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|330993479|ref|ZP_08317414.1| Ferredoxin-2 [Gluconacetobacter sp. SXCC-1] gi|329759509|gb|EGG76018.1| Ferredoxin-2 [Gluconacetobacter sp. SXCC-1] Length = 107 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 1/107 (0%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VTENCI CK TDCVEVCPVDCFY GENFL I+PDECIDCGVCEPECP +AI PD++ Sbjct: 2 VTENCIRCKFTDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIFPDSDDRAT 61 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 W ++N++YA WPNIT K ++ A + K E SP P Sbjct: 62 PWAELNAKYAAVWPNITRKLDAPADAEEWKDKPNKKE-LLSPEPQKG 107 >gi|161525374|ref|YP_001580386.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189349889|ref|YP_001945517.1| ferredoxin [Burkholderia multivorans ATCC 17616] gi|160342803|gb|ABX15889.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia multivorans ATCC 17616] gi|189333911|dbj|BAG42981.1| ferredoxin [Burkholderia multivorans ATCC 17616] Length = 107 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKVWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|307730560|ref|YP_003907784.1| putative ferredoxin [Burkholderia sp. CCGE1003] gi|307585095|gb|ADN58493.1| putative ferredoxin [Burkholderia sp. CCGE1003] Length = 107 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++++N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQNFIELNADLAKSWPSITKTKAPLPEADEFKDVKEKLALLV 106 >gi|170696356|ref|ZP_02887486.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|323526893|ref|YP_004229046.1| putative ferredoxin [Burkholderia sp. CCGE1001] gi|170138762|gb|EDT06960.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|323383895|gb|ADX55986.1| putative ferredoxin [Burkholderia sp. CCGE1001] Length = 107 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++++N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQNFIELNADLAKNWPSITKTKAPLPEADEFKDVKEKLALLV 106 >gi|167563567|ref|ZP_02356483.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia oklahomensis EO147] gi|167570727|ref|ZP_02363601.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia oklahomensis C6786] Length = 107 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N++ A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTELNADLAKIWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|17545833|ref|NP_519235.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17428127|emb|CAD14816.1| probable ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 108 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 59/104 (56%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYE 101 + W+ IN+E A WP+IT K LP A + VK K + Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKSPLPDAEEWKDVKDKEQ 104 >gi|134295130|ref|YP_001118865.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia vietnamiensis G4] gi|134138287|gb|ABO54030.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia vietnamiensis G4] gi|325527386|gb|EGD04739.1| ferredoxin [Burkholderia sp. TJI49] Length = 107 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKNWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|91983686|gb|ABE68849.1| FdxA [Pseudomonas sp. PITR2] Length = 104 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP-- 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPT 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKTGKIADL 102 >gi|121594158|ref|YP_986054.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222111124|ref|YP_002553388.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120606238|gb|ABM41978.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221730568|gb|ACM33388.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 107 Score = 142 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++KIN+E ++ +IT +K +LP A +G K ++ Sbjct: 61 LPSDQLAFIKINAELTPKFKSITKRKAALPDADDWNGKPGKLDQL 105 >gi|91983680|gb|ABE68846.1| FdxA [Pseudomonas sp. F113] Length = 104 Score = 142 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 GMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKIADL 102 >gi|88705822|ref|ZP_01103531.1| Ferredoxin [Congregibacter litoralis KT71] gi|88699893|gb|EAQ97003.1| Ferredoxin [Congregibacter litoralis KT71] Length = 107 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E+CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E Sbjct: 1 MTFVVGEDCIKCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++L++N+E A WP IT K + A + G K Sbjct: 61 LPADQQVFLELNAELAEVWPCITEMKPAPEDAEEWAGKPGKL 102 >gi|77163722|ref|YP_342247.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosococcus oceani ATCC 19707] gi|76882036|gb|ABA56717.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosococcus oceani ATCC 19707] Length = 112 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 59/100 (59%), Positives = 69/100 (69%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCVEVCPVDCF+EG NFL I PDECIDC +CEPECP +AI D Sbjct: 1 MTFVVTENCIKCKYTDCVEVCPVDCFHEGPNFLVIDPDECIDCTLCEPECPAEAIFSEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 + +L IN+E A WP IT KE A + D +K Sbjct: 61 VPKEHQKYLGINAELAKSWPVITESKEPPADADQWDRIKN 100 >gi|149926235|ref|ZP_01914497.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149825053|gb|EDM84265.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 107 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 68/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E A WP+IT K LP A VK K + Sbjct: 61 VPADQVKFIDMNVELAKDWPSITRMKAHLPDADDWKDVKDKLQ 103 >gi|115351029|ref|YP_772868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria AMMD] gi|170700862|ref|ZP_02891850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] gi|171317138|ref|ZP_02906340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|172060034|ref|YP_001807686.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria MC40-6] gi|115281017|gb|ABI86534.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ambifaria AMMD] gi|170134225|gb|EDT02565.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] gi|171097705|gb|EDT42535.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|171992551|gb|ACB63470.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MC40-6] Length = 107 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQEKLHLL 105 >gi|296932695|gb|ADH93501.1| ferredoxin I [Pseudomonas sp. In5] Length = 104 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPE 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KKES+P A + DGVK K + Sbjct: 61 EMQEFIQLNVELAEIWPNITEKKESMPDAEEWDGVKGKIKDL 102 >gi|300691906|ref|YP_003752901.1| ferredoxin (fdxA) [Ralstonia solanacearum PSI07] gi|299078966|emb|CBJ51626.1| Ferredoxin (fdxA) [Ralstonia solanacearum PSI07] Length = 108 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYE 101 + W+ IN+E A WP+IT K LP A + VK K + Sbjct: 61 VPADQQKWIAINAELAQSGWPSITKTKSPLPDAEEWKDVKDKEQ 104 >gi|253996373|ref|YP_003048437.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera mobilis JLW8] gi|253983052|gb|ACT47910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera mobilis JLW8] Length = 107 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTENCI CK TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI D Sbjct: 1 MTYVVTENCIQCKFTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + ++ +N+ A WP IT +KE+LP A M+G K Sbjct: 61 VPADQQEYIALNARLAQVWPTITARKEALPDAEAMNGAPNK 101 >gi|121611231|ref|YP_999038.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121555871|gb|ABM60020.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 109 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++K+N++ +A W +IT +K +LP A + +G K ++ Sbjct: 61 LPADQLAFIKLNADLAFAAGWKSITKRKGALPDADEWNGKPGKVDQLI 108 >gi|167837385|ref|ZP_02464268.1| 4Fe-4S ferredoxin [Burkholderia thailandensis MSMB43] Length = 107 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|253999231|ref|YP_003051294.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylovorus sp. SIP3-4] gi|313201319|ref|YP_004039977.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylovorus sp. MP688] gi|253985910|gb|ACT50767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylovorus sp. SIP3-4] gi|312440635|gb|ADQ84741.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylovorus sp. MP688] Length = 107 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTENCI CK+TDCV+VCPVDCF EG NFLAI+PDECIDC +C ECP +AI D Sbjct: 1 MAYVVTENCIQCKYTDCVDVCPVDCFVEGPNFLAINPDECIDCTLCVAECPAEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N+ + WP IT +K+ LP A +G K + Sbjct: 61 VPADQQEFIALNARLSAIWPTITGRKDPLPDADSNNGKAGKRDLLV 106 >gi|206559364|ref|YP_002230125.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|206561234|ref|YP_002231999.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|198035402|emb|CAR51278.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|198037276|emb|CAR53198.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] Length = 107 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP+IT K + A + V++K Sbjct: 61 VPTDQQQFTELNAELAKNWPSITKTKPAPADADEWKDVQEKLHLL 105 >gi|1589261|prf||2210388A ferredoxin:ISOTYPE=II Length = 104 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 63/111 (56%), Positives = 70/111 (63%), Gaps = 8/111 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVC PECP +AI Sbjct: 1 PYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCNPECPAEAI------ 54 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WL+IN ++A WPNIT K +L A K S NPG Sbjct: 55 -AGKWLEINRKFADLWPNITRKGPALADADDWKDKPDK-TGLLSENPGKGT 103 >gi|29653919|ref|NP_819611.1| ferredoxin [Coxiella burnetii RSA 493] gi|153208803|ref|ZP_01947030.1| ferrodoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154706253|ref|YP_001424826.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161829743|ref|YP_001596509.1| ferrodoxin [Coxiella burnetii RSA 331] gi|165919089|ref|ZP_02219175.1| ferrodoxin [Coxiella burnetii RSA 334] gi|212212928|ref|YP_002303864.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212218799|ref|YP_002305586.1| ferredoxin [Coxiella burnetii CbuK_Q154] gi|29541182|gb|AAO90125.1| ferredoxin [Coxiella burnetii RSA 493] gi|120575709|gb|EAX32333.1| ferrodoxin [Coxiella burnetii 'MSU Goat Q177'] gi|154355539|gb|ABS77001.1| ferredoxin [Coxiella burnetii Dugway 5J108-111] gi|161761610|gb|ABX77252.1| ferrodoxin [Coxiella burnetii RSA 331] gi|165917223|gb|EDR35827.1| ferrodoxin [Coxiella burnetii RSA 334] gi|212011338|gb|ACJ18719.1| ferredoxin [Coxiella burnetii CbuG_Q212] gi|212013061|gb|ACJ20441.1| ferredoxin [Coxiella burnetii CbuK_Q154] Length = 111 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV +NCI CK+TDCVEVCPVDCF EG N L I PDECIDC +C PECPVDAI + + Sbjct: 1 MTFVVIDNCIRCKYTDCVEVCPVDCFREGPNMLVIDPDECIDCNLCVPECPVDAIFAEDD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E +L++N++ A +WP IT KKE+ P A V K + P Sbjct: 61 LPEEKHAFLEMNADLAKRWPLITAKKEAPPDADDWTEVPDKLQYLEEEWP 110 >gi|327481594|gb|AEA84904.1| ferredoxin, 4Fe-4S [Pseudomonas stutzeri DSM 4166] Length = 107 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVVTENCI CK+TDCVEVCP DCF+EG NFL I+P+ CIDC +C PECP DAI D Sbjct: 1 MTYVVTENCIRCKYTDCVEVCPADCFHEGPNFLVINPETCIDCSLCAPECPADAIFADNA 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 G + +L++N+E A WP IT L A K Sbjct: 61 LPEGQQHFLELNAELAEVWPVITQSASPLAEAETWVDQSGKL 102 >gi|78065684|ref|YP_368453.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] gi|77966429|gb|ABB07809.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] Length = 107 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQDKLHLL 105 >gi|149187260|ref|ZP_01865558.1| ferredoxin [Vibrio shilonii AK1] gi|148838796|gb|EDL55735.1| ferredoxin [Vibrio shilonii AK1] Length = 107 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D FYEG NF+ I P +CIDCG+C PEC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFYEGPNFMVISPIDCIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WPNIT K ++ A K +GV K Sbjct: 61 LTEDQQVFIELNAELAEVWPNITEVKPAMDEAEKWNGVPNKL 102 >gi|167586594|ref|ZP_02378982.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ubonensis Bu] Length = 107 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPSDQQQFTALNAELAKNWPSITKTKPAPADADEWKDVQEKLHLL 105 >gi|152982663|ref|YP_001352409.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282740|gb|ABR91150.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 107 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CILC++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCILCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++K+N + + +WP+IT K + A + K + Sbjct: 61 VPADQQVFIKLNVDLSREWPSITKTKPPMAEAEEWKDKTDKLQ 103 >gi|118594760|ref|ZP_01552107.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Methylophilales bacterium HTCC2181] gi|118440538|gb|EAV47165.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Methylophilales bacterium HTCC2181] Length = 108 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 2/108 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFLAI P+ECIDC +C ECPV+AI D Sbjct: 1 MTYVVTESCIQCKYTDCVDVCPVDCFVEGPNFLAIDPEECIDCTLCVAECPVEAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 + +++IN++ A WP IT KK++LP A G K E Sbjct: 61 VPEDQQEFIEINAKLAKVWPIITAKKDALPDADAFAGQANKKELLIEE 108 >gi|91983672|gb|ABE68842.1| FdxA [Pseudomonas protegens] Length = 103 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 2/101 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PG 62 VT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPEE 60 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++++N E A WPNIT KK+ LP A + DGVK K + Sbjct: 61 MQEFIQLNVELAEIWPNITEKKDPLPDAEEWDGVKGKIKDL 101 >gi|238026583|ref|YP_002910814.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] gi|237875777|gb|ACR28110.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia glumae BGR1] Length = 107 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFTPLNAELAKLWPSITKTKPAPGDADEWKDVQDKLHLL 105 >gi|241662657|ref|YP_002981017.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|309781213|ref|ZP_07675950.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] gi|240864684|gb|ACS62345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] gi|308920034|gb|EFP65694.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] Length = 109 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYE 101 + W+ IN+E A WP+IT K+ LP A VK K + Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKQPLPDADDWKDVKDKEQ 104 >gi|91983678|gb|ABE68845.1| FdxA [Pseudomonas sp. PILH1] Length = 104 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 61/102 (59%), Positives = 74/102 (72%), Gaps = 2/102 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E Sbjct: 1 VVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPA 60 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G+E ++++N+E A WPNIT KK+ +P A + DG K Sbjct: 61 GMENFIELNAELADVWPNITEKKDPMPGAEEWDGKTGKIADL 102 >gi|53720069|ref|YP_109055.1| ferredoxin [Burkholderia pseudomallei K96243] gi|76809315|ref|YP_334313.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|124383747|ref|YP_001028729.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126441887|ref|YP_001059835.1| ferredoxin [Burkholderia pseudomallei 668] gi|126453420|ref|YP_001067122.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|134277063|ref|ZP_01763778.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|167002775|ref|ZP_02268565.1| ferredoxin [Burkholderia mallei PRL-20] gi|167720598|ref|ZP_02403834.1| putative ferredoxin [Burkholderia pseudomallei DM98] gi|167739587|ref|ZP_02412361.1| putative ferredoxin [Burkholderia pseudomallei 14] gi|167816790|ref|ZP_02448470.1| putative ferredoxin [Burkholderia pseudomallei 91] gi|167825197|ref|ZP_02456668.1| putative ferredoxin [Burkholderia pseudomallei 9] gi|167846694|ref|ZP_02472202.1| putative ferredoxin [Burkholderia pseudomallei B7210] gi|167903669|ref|ZP_02490874.1| putative ferredoxin [Burkholderia pseudomallei NCTC 13177] gi|167911917|ref|ZP_02499008.1| putative ferredoxin [Burkholderia pseudomallei 112] gi|217420695|ref|ZP_03452200.1| ferredoxin-1 [Burkholderia pseudomallei 576] gi|242316088|ref|ZP_04815104.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|254191212|ref|ZP_04897716.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|254195729|ref|ZP_04902155.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|254261489|ref|ZP_04952543.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|262193289|ref|YP_001081365.2| ferredoxin [Burkholderia mallei NCTC 10247] gi|52210483|emb|CAH36466.1| ferredoxin [Burkholderia pseudomallei K96243] gi|76578768|gb|ABA48243.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|124291767|gb|ABN01036.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126221380|gb|ABN84886.1| ferredoxin-1 [Burkholderia pseudomallei 668] gi|126227062|gb|ABN90602.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|134250713|gb|EBA50792.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|157938884|gb|EDO94554.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|169652474|gb|EDS85167.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|217396107|gb|EEC36124.1| ferredoxin-1 [Burkholderia pseudomallei 576] gi|242139327|gb|EES25729.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|243061597|gb|EES43783.1| ferredoxin [Burkholderia mallei PRL-20] gi|254220178|gb|EET09562.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|261835061|gb|ABO05614.2| ferredoxin [Burkholderia mallei NCTC 10247] Length = 107 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQHFTALNAELAKDWPSITKTKPAPADADEWKDVQEKLHLL 105 >gi|186475572|ref|YP_001857042.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phymatum STM815] gi|184192031|gb|ACC69996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phymatum STM815] Length = 107 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + + +N+E A WP+IT K LP A VK+K Sbjct: 61 VPGDQQHFTALNAELAKAWPSITKTKSPLPEADDFKDVKEKL 102 >gi|217968856|ref|YP_002354090.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|217506183|gb|ACK53194.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 117 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 53/115 (46%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV +CPVD F EG NFL I P+ECIDC +C ECPVDAI P+ E Sbjct: 1 MTHVVTEACIRCKYTDCVSMCPVDAFREGPNFLVIDPEECIDCTLCVAECPVDAIVPEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 +L +N+ A WP I LP A V K + G + Sbjct: 61 LSDEQREYLALNAALAKDWPRIVEAHAPLPDADAWAKVADKRAWLDTARAGDPDA 115 >gi|167895283|ref|ZP_02482685.1| putative ferredoxin [Burkholderia pseudomallei 7894] gi|167919911|ref|ZP_02507002.1| putative ferredoxin [Burkholderia pseudomallei BCC215] gi|237813231|ref|YP_002897682.1| ferredoxin [Burkholderia pseudomallei MSHR346] gi|237504029|gb|ACQ96347.1| ferredoxin [Burkholderia pseudomallei MSHR346] Length = 107 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQQFTALNAELAKDWPSITKTKPAPADADEWKDVQEKLHLL 105 >gi|91788203|ref|YP_549155.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91697428|gb|ABE44257.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 109 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT++V+E+CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI D Sbjct: 1 MTHIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEY--ATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++K+N+E A W +IT +K++LP A + K ++ Sbjct: 61 VPADQLQFIKLNAELSRAAGWKSITKRKDALPDAEEWKDKTGKLDELV 108 >gi|149911417|ref|ZP_01900035.1| putative ferredoxin [Moritella sp. PE36] gi|149805525|gb|EDM65530.1| putative ferredoxin [Moritella sp. PE36] Length = 107 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CKH DCV VCP D F+EG NFL I P CIDCG+C PECPVDAI + E Sbjct: 1 MAFVVTENCIKCKHGDCVPVCPADAFHEGPNFLVIDPIACIDCGLCVPECPVDAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +++++IN E + WP IT K E A DGV+ K Sbjct: 61 VPEDQQVFIEINEELSELWPVITEKCEPPADADDWDGVENKL 102 >gi|209521147|ref|ZP_03269874.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. H160] gi|295677210|ref|YP_003605734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] gi|209498422|gb|EDZ98550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. H160] gi|295437053|gb|ADG16223.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] Length = 107 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIKCRYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N++ A WP+IT K LP A + VK+K Sbjct: 61 VPGDQQDFIALNADLAKAWPSITKTKAPLPEAEEFKDVKEKLALLV 106 >gi|300704516|ref|YP_003746119.1| ferredoxin (fdxa) [Ralstonia solanacearum CFBP2957] gi|299072180|emb|CBJ43512.1| Ferredoxin (fdxA) [Ralstonia solanacearum CFBP2957] Length = 108 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYE 101 + W+ IN+E A WP+IT K LP A + VK K + Sbjct: 61 VPADQQKWIAINAELAQAGWPSITKTKSPLPEADQWKDVKDKEQ 104 >gi|1169669|sp|P80448|FER2_RHORU RecName: Full=Ferredoxin-2; AltName: Full=Ferredoxin II; Short=FdII Length = 106 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 63/111 (56%), Positives = 70/111 (63%), Gaps = 8/111 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVTENCI CK+ DCVEVCPVDCFYEGENFL I+PDECIDCGVC PECP +AI Sbjct: 1 PYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCNPECPAEAI------ 54 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 WL+IN ++A WPNIT K +L A K S NPG Sbjct: 55 -AGKWLEINRKFADLWPNITRKGPALADADDWKDKPDK-TGLLSENPGKGT 103 >gi|255020217|ref|ZP_05292286.1| putative ferredoxin [Acidithiobacillus caldus ATCC 51756] gi|254970359|gb|EET27852.1| putative ferredoxin [Acidithiobacillus caldus ATCC 51756] Length = 108 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVTENCI CK+TDC EVCPV+CF+EG NFLAI P ECIDC C PECP DAI D Sbjct: 1 MTYVVTENCIQCKYTDCAEVCPVECFHEGPNFLAIDPVECIDCAACVPECPADAIFAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + +N+E + WP I KK + A + +G K Sbjct: 61 VPEDQRDFTALNAELSKHWPVILRKKAAPADADEWNGKPGKRPLL 105 >gi|303257808|ref|ZP_07343818.1| ferredoxin, 4Fe-4S [Burkholderiales bacterium 1_1_47] gi|330998771|ref|ZP_08322499.1| ferredoxin-1 [Parasutterella excrementihominis YIT 11859] gi|302859411|gb|EFL82492.1| ferredoxin, 4Fe-4S [Burkholderiales bacterium 1_1_47] gi|329576268|gb|EGG57784.1| ferredoxin-1 [Parasutterella excrementihominis YIT 11859] Length = 109 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTE CILCK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI + D Sbjct: 1 MAHVVTEPCILCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPTNAIMAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++ +N+E A WP+IT K A K V K + Sbjct: 61 VPEDQQEFIALNAELARVWPSITRMKPHTDEAEKWRDVLDKRQ 103 >gi|330815952|ref|YP_004359657.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] gi|327368345|gb|AEA59701.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia gladioli BSR3] Length = 107 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEGCIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V+ K Sbjct: 61 VPGDQQQFAPLNAELAKLWPSITKTKPAPGDADEWKDVQDKLHLL 105 >gi|74316053|ref|YP_313793.1| 7Fe ferredoxin [Thiobacillus denitrificans ATCC 25259] gi|74055548|gb|AAZ95988.1| 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Thiobacillus denitrificans ATCC 25259] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVT+ C+ CK+TDCV+VCPVDCF+EG NFLAI P+ECIDC +C ECPV+AI D Sbjct: 1 MTYVVTDACVKCKYTDCVDVCPVDCFHEGPNFLAIDPEECIDCTLCVAECPVEAIYAEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E A W I + + LP A + GVK K + Sbjct: 61 VPDDQRAYIALNAELAKAWKVIVERHDPLPDADEWAGVKDKIK 103 >gi|83749935|ref|ZP_00946892.1| Ferredoxin [Ralstonia solanacearum UW551] gi|83723395|gb|EAP70616.1| Ferredoxin [Ralstonia solanacearum UW551] Length = 145 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 5/117 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI D Sbjct: 28 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAEAD 87 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKY-EKYFSPNPGGKN 112 ++ +N++ + + WP +T + L A+ VK K +P PG + Sbjct: 88 VPADQREFIALNAQLSRRPDWPRLTQVQPPLADHARWAQVKDKRSTLLIAPEPGTQT 144 >gi|224588329|gb|ACN58953.1| ferredoxin [uncultured bacterium BLR10] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF +G NFLAI PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCISCRYTDCVDVCPVDCFRQGPNFLAIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++KIN + A WP+IT LP A + VK+K Sbjct: 61 VPGDQQQFIKINVDLARNWPSITKTVSPLPEADQFKDVKEKLHLLV 106 >gi|33594451|ref|NP_882095.1| ferredoxin [Bordetella pertussis Tohama I] gi|33564526|emb|CAE43841.1| ferredoxin [Bordetella pertussis Tohama I] gi|332383862|gb|AEE68709.1| ferredoxin [Bordetella pertussis CS] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E + ++P+I+ K+ L A + +GV+ K + Sbjct: 61 VPQDQVPFIALNVELSAEFPSISRAKKPLEDADQWNGVQDKLQ 103 >gi|170727750|ref|YP_001761776.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169813097|gb|ACA87681.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVT+NCI CK+TDCV VCPVD F+EG NFLAI+PD CIDC +C PEC AI + Sbjct: 1 MAFVVTDNCIRCKYTDCVAVCPVDAFHEGPNFLAINPDVCIDCELCVPECAAAAIFQEDA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 G+E +L++N+E A WP IT ++ A + DGV+ K E Sbjct: 61 LPEGMEQYLELNAELAQIWPVITEVIDAPLDAEQWDGVEDKREHLI 106 >gi|89902899|ref|YP_525370.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89347636|gb|ABD71839.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI CK+TDCV+VCPVD F EG NFLAI PDECIDC VC PECPV+AI D Sbjct: 1 MTFVVTESCISCKYTDCVDVCPVDAFREGPNFLAIDPDECIDCAVCVPECPVNAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++ +N+E A +W IT K +LP A K V K + Sbjct: 61 VPADQQDFIALNAELAPKWKTITRTKAALPDADKWASVAAKRAEL 105 >gi|57238754|ref|YP_179890.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58578675|ref|YP_196887.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58616738|ref|YP_195937.1| ferredoxin [Ehrlichia ruminantium str. Gardel] gi|57160833|emb|CAH57731.1| ferredoxin [Ehrlichia ruminantium str. Welgevonden] gi|58416350|emb|CAI27463.1| Ferredoxin [Ehrlichia ruminantium str. Gardel] gi|58417301|emb|CAI26505.1| Ferredoxin [Ehrlichia ruminantium str. Welgevonden] Length = 125 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ +T+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI D Sbjct: 1 MTHFITDRCIKCKYTDCVEVCPVDCFYEGPNMLVIDPDQCIDCGVCIPECPIDAIIADDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + +IN E++ +W NIT++K LP A K K+ YF Sbjct: 61 IKDILESDNNVLNDEQKSFKKFYEINREFSKKWENITSRKSPLPEAESYKYKKDKF-IYF 119 Query: 105 SPN 107 + N Sbjct: 120 NEN 122 >gi|53725758|ref|YP_102306.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|254199200|ref|ZP_04905566.1| ferredoxin [Burkholderia mallei FMH] gi|52429181|gb|AAU49774.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|147748796|gb|EDK55870.1| ferredoxin [Burkholderia mallei FMH] Length = 107 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + +N+E A WP+IT K + A + V++K Sbjct: 61 VPGDQQHFTALNAELAKDWPSITKTKPAPADANEWKDVQEKLHLL 105 >gi|221066142|ref|ZP_03542247.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|264679310|ref|YP_003279217.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|299533455|ref|ZP_07046836.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] gi|220711165|gb|EED66533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|262209823|gb|ACY33921.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|298718561|gb|EFI59537.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] Length = 109 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYA--TQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++K+N + + W +IT +K SLP A + +G K + Sbjct: 61 VPADQLAFIKLNVDLSQLKSWKSITKRKASLPDADEWNGKPNKVDLL 107 >gi|222102197|ref|YP_002546787.1| hypothetical protein Arad_12331 [Agrobacterium radiobacter K84] gi|221728314|gb|ACM31323.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 107 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVTENCI CK DCVE CPV+CF+EG NFL I+P ECIDCGVCEP CP +AI P + Sbjct: 1 MTFVVTENCIKCKFQDCVEACPVNCFHEGPNFLVINPSECIDCGVCEPVCPAEAIYPLEE 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + +NSE A +WP IT K A+ DG + K Sbjct: 61 LPVEQAAFAALNSELAAEWPVITIKGPPPADASIWDGKRGKL 102 >gi|71278991|ref|YP_269613.1| ferredoxin, 4Fe-4S [Colwellia psychrerythraea 34H] gi|71144731|gb|AAZ25204.1| ferredoxin, 4Fe-4S [Colwellia psychrerythraea 34H] Length = 111 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCILCK+TDCV VCP D FYEG NFL I PD+CIDC +C ECP AI + E Sbjct: 1 MAFVVTDNCILCKYTDCVAVCPADAFYEGPNFLVISPDDCIDCDLCPVECPAGAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E A WP IT K L A K DGV K + Sbjct: 61 VPADQQEFIELNAELAKHWPRITEVKPPLEQAEKWDGVADKIQ 103 >gi|226951441|ref|ZP_03821905.1| 7-Fe ferredoxin [Acinetobacter sp. ATCC 27244] gi|262373026|ref|ZP_06066305.1| ferredoxin [Acinetobacter junii SH205] gi|294650963|ref|ZP_06728304.1| ferredoxin 1 [Acinetobacter haemolyticus ATCC 19194] gi|226837808|gb|EEH70191.1| 7-Fe ferredoxin [Acinetobacter sp. ATCC 27244] gi|262313051|gb|EEY94136.1| ferredoxin [Acinetobacter junii SH205] gi|292823144|gb|EFF82006.1| ferredoxin 1 [Acinetobacter haemolyticus ATCC 19194] Length = 109 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTENCI CK+ DCVEVCPVDCFYEG NFL I+PDECIDC +CEPECP +AI + E Sbjct: 1 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWP--NITTKKESLPSAAKMDGVKQKYE 101 G E+++++N+E + +W NIT E + +G K + Sbjct: 61 LPEGQEVFIELNAELSEKWAGNNITQIGEQPADREEWNGKPNKLQ 105 >gi|187928049|ref|YP_001898536.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|187724939|gb|ACD26104.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] Length = 109 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 69/104 (66%), Gaps = 3/104 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+C+ CK+TDCV+VCPVDCF EG NFL I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCVRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ-WPNITTKKESLPSAAKMDGVKQKYE 101 + W+ IN E A WP+IT K+ LP A VK K + Sbjct: 61 VPADQQKWIAINVELAQAGWPSITKTKQPLPDADDWKDVKDKEQ 104 >gi|329910055|ref|ZP_08275214.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] gi|327546280|gb|EGF31309.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] Length = 107 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE+CI C++TDCV+VCPVDCF EG NFL+I PDECIDC VC ECPV+AI D Sbjct: 1 MTHVVTESCIQCRYTDCVDVCPVDCFREGPNFLSIDPDECIDCAVCVAECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++K+N + + WP+IT K +LP A + ++ K Sbjct: 61 VPADQQQFIKLNIDLSRGWPSITKTKAALPEADEFKDMQAKLHLL 105 >gi|91983714|gb|ABE68863.1| FdxA [Pseudomonas sp. Q128-87] Length = 104 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 4 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 63 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 64 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 102 >gi|121605331|ref|YP_982660.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120594300|gb|ABM37739.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polaromonas naphthalenivorans CJ2] Length = 109 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV++ CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVSDPCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEY--ATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++KIN++ A W +IT +K++LP A + K + Sbjct: 61 LPSDQLHFIKINADLTSAPGWKSITKRKDALPDADEWKDKTNKLSELV 108 >gi|198283226|ref|YP_002219547.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668155|ref|YP_002425458.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247747|gb|ACH83340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520368|gb|ACK80954.1| ferredoxin [Acidithiobacillus ferrooxidans ATCC 23270] Length = 107 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +CEPECP AI D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCEPECPAGAIFRDDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G + + +IN+ A WP I KK + A VK K Sbjct: 61 MPDGQKEFEEINARLAKIWPAIIQKKAAPEDADAWLHVKDK 101 >gi|317401942|gb|EFV82546.1| ferredoxin 1 [Achromobacter xylosoxidans C54] Length = 107 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E + ++ +I+ K+ LP A + +G + K + Sbjct: 61 VPQDQLNFIALNAELSPEFASISRAKKPLPDADEWNGKQDKLQ 103 >gi|119468754|ref|ZP_01611806.1| putative ferredoxin [Alteromonadales bacterium TW-7] gi|119447810|gb|EAW29076.1| putative ferredoxin [Alteromonadales bacterium TW-7] Length = 107 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PECP +AI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECPAEAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP IT K + A +GV+ K + Sbjct: 61 LPDSQKEFTELNAELALIWPRITQVKSAPDDADTWNGVENKLKLL 105 >gi|91789908|ref|YP_550860.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91699133|gb|ABE45962.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 109 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVT+ CI CK+TDCV+VCPVDCF EG +FL I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVTDACIKCKYTDCVDVCPVDCFREGPDFLVIDPDECIDCAVCIPECPVNAIYADTD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 T + +L++N A WP ++ + LP+A + K Sbjct: 61 TPGQFQPFLELNERLAKLWPTLSRRTAPLPTAEQWKDKTGKL 102 >gi|311104718|ref|YP_003977571.1| ferredoxin 2 [Achromobacter xylosoxidans A8] gi|310759407|gb|ADP14856.1| ferredoxin 2 [Achromobacter xylosoxidans A8] Length = 107 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E + ++ +I+ K+ LP A + +G + K + Sbjct: 61 VPQDQMNFIALNAELSPEFASISRAKKPLPDADEWNGKQDKLQ 103 >gi|300697403|ref|YP_003748064.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957] gi|299074127|emb|CBJ53671.1| Ferredoxin 1 [Ralstonia solanacearum CFBP2957] Length = 116 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 5/116 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI D Sbjct: 1 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAESD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF-SPNPGGK 111 ++ +N++ + + WP +T + L A+ VK K + +P PG + Sbjct: 61 VPADQREFIALNAQLSRRPDWPRLTQVQPPLADHARWAQVKDKRDTLLITPEPGTR 116 >gi|319762492|ref|YP_004126429.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|330825657|ref|YP_004388960.1| ferredoxin, C-terminal protein [Alicycliphilus denitrificans K601] gi|317117053|gb|ADU99541.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|329311029|gb|AEB85444.1| Ferredoxin, C-terminal protein [Alicycliphilus denitrificans K601] Length = 107 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVVENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCVPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++KIN+E ++ +IT +K +LP A + +G K + Sbjct: 61 LPSDQLAFIKINAELTPKFKSITKRKAALPDADEWNGTPGKLKDL 105 >gi|293603978|ref|ZP_06686391.1| O-succinylhomoserine sulfhydrylase [Achromobacter piechaudii ATCC 43553] gi|292817582|gb|EFF76650.1| O-succinylhomoserine sulfhydrylase [Achromobacter piechaudii ATCC 43553] Length = 107 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N+E + ++ +I+ K+ LP A +G + K + Sbjct: 61 VPQDQLNFIALNAELSPEFASISRAKKPLPDADDWNGKQDKLQ 103 >gi|163856039|ref|YP_001630337.1| ferredoxin 1 (FdI) [Bordetella petrii DSM 12804] gi|163259767|emb|CAP42068.1| Ferredoxin 1 (FdI) [Bordetella petrii] Length = 107 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E ++ I+ K+ LP A + +GV K + Sbjct: 61 VPQDQVQFIALNAELTPEFAPISRAKKPLPDADEWNGVPDKLQHL 105 >gi|224826355|ref|ZP_03699457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] gi|224601456|gb|EEG07637.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] Length = 107 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVVTE CI CK+TDCV+VCPVDCF+EG NFLAI PDECIDC +C ECPV+AI D Sbjct: 1 MAYVVTEACIKCKYTDCVDVCPVDCFHEGPNFLAIDPDECIDCTLCVAECPVEAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +++IN + WP I KK+ LP V K + Sbjct: 61 VPADQLHFIEINDRLSKVWPVIAAKKDPLPDHEDWAKVTGKTQ 103 >gi|34497002|ref|NP_901217.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34102859|gb|AAQ59223.1| ferredoxin [Chromobacterium violaceum ATCC 12472] Length = 112 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVV +CI CKH+DCV+VCP D F+EG N LAI+PD+CIDCG+C PECP+DAI+ D Sbjct: 1 MTYVVLSDCIGCKHSDCVDVCPTDSFHEGPNMLAINPDDCIDCGLCVPECPIDAIREDKA 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + +N+E A +WPNIT K +LP A G K + Sbjct: 61 VPSHEHGMIALNAELAQRWPNITKSKPALPEAEAWRGRPDKLQ 103 >gi|332186983|ref|ZP_08388724.1| 4Fe-4S binding domain protein [Sphingomonas sp. S17] gi|332012993|gb|EGI55057.1| 4Fe-4S binding domain protein [Sphingomonas sp. S17] Length = 99 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 63/99 (63%), Positives = 77/99 (77%), Gaps = 1/99 (1%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA 74 DCVEVCPVDCFYEGEN L I+P ECIDCGVCEPECP +AI PDTE GLE WL++N+ ++ Sbjct: 1 MDCVEVCPVDCFYEGENMLVINPSECIDCGVCEPECPAEAILPDTESGLEQWLELNTTFS 60 Query: 75 TQWPNITTKKE-SLPSAAKMDGVKQKYEKYFSPNPGGKN 112 QWPN+T K + + P A M GV+ KYE++FSP PG + Sbjct: 61 AQWPNVTRKLDQTPPDADAMKGVENKYEQFFSPEPGKGD 99 >gi|190571735|ref|YP_001976093.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019223|ref|ZP_03335030.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190358007|emb|CAQ55475.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995332|gb|EEB55973.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 125 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 17/126 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + IN EY+ +WPNIT KK+SL +A + K K YF Sbjct: 61 IKDILELDEGLLNNEQKIFKSFYNINVEYSQKWPNITAKKQSLDTAEEYKEKKDK-TAYF 119 Query: 105 SPNPGG 110 N G Sbjct: 120 DENLGS 125 >gi|91983684|gb|ABE68848.1| FdxA [Pseudomonas sp. CM1A2] Length = 103 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 3 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 62 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 63 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 101 >gi|332529166|ref|ZP_08405130.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] gi|332041389|gb|EGI77751.1| 4Fe-4S ferredoxin [Hylemonella gracilis ATCC 19624] Length = 109 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVTEACIRCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 G +K+N+E A W +IT +K +LP A + K + Sbjct: 61 VPSGQMHMIKLNAELARAPGWKSITKRKAALPDAEEWKDKTGKLSEL 107 >gi|91983698|gb|ABE68855.1| FdxA [Pseudomonas sp. P97.30] gi|91983700|gb|ABE68856.1| FdxA [Pseudomonas sp. K94.31] Length = 101 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 NFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 99 >gi|53719819|ref|YP_108805.1| ferredoxin I [Burkholderia pseudomallei K96243] gi|53724135|ref|YP_103250.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76809614|ref|YP_334029.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121598984|ref|YP_993430.1| ferredoxin [Burkholderia mallei SAVP1] gi|124386308|ref|YP_001029137.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|134277295|ref|ZP_01764010.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|167824830|ref|ZP_02456301.1| ferredoxin [Burkholderia pseudomallei 9] gi|226198916|ref|ZP_03794479.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|238562467|ref|ZP_00440400.2| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|251766955|ref|ZP_02265481.2| ferredoxin [Burkholderia mallei PRL-20] gi|254178196|ref|ZP_04884851.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|254191489|ref|ZP_04897993.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|254198288|ref|ZP_04904710.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|254200199|ref|ZP_04906565.1| ferredoxin [Burkholderia mallei FMH] gi|254209279|ref|ZP_04915625.1| ferredoxin [Burkholderia mallei JHU] gi|254259347|ref|ZP_04950401.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|254297156|ref|ZP_04964609.1| putative ferredoxin [Burkholderia pseudomallei 406e] gi|254358050|ref|ZP_04974323.1| ferredoxin [Burkholderia mallei 2002721280] gi|262193288|ref|YP_001080939.2| ferredoxin [Burkholderia mallei NCTC 10247] gi|52210233|emb|CAH36212.1| ferredoxin I [Burkholderia pseudomallei K96243] gi|52427558|gb|AAU48151.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76579067|gb|ABA48542.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121227794|gb|ABM50312.1| ferredoxin [Burkholderia mallei SAVP1] gi|124294328|gb|ABN03597.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|134250945|gb|EBA51024.1| putative ferredoxin [Burkholderia pseudomallei 305] gi|147749795|gb|EDK56869.1| ferredoxin [Burkholderia mallei FMH] gi|147750052|gb|EDK57123.1| ferredoxin [Burkholderia mallei JHU] gi|148027177|gb|EDK85198.1| ferredoxin [Burkholderia mallei 2002721280] gi|157807005|gb|EDO84175.1| putative ferredoxin [Burkholderia pseudomallei 406e] gi|157939161|gb|EDO94831.1| putative ferredoxin [Burkholderia pseudomallei Pasteur 52237] gi|160699235|gb|EDP89205.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|169655029|gb|EDS87722.1| putative ferredoxin [Burkholderia pseudomallei S13] gi|225929016|gb|EEH25040.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|238522582|gb|EEP86025.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|243064296|gb|EES46482.1| ferredoxin [Burkholderia mallei PRL-20] gi|254218036|gb|EET07420.1| putative ferredoxin [Burkholderia pseudomallei 1710a] gi|261835063|gb|ABO05671.2| ferredoxin [Burkholderia mallei NCTC 10247] Length = 112 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|187926655|ref|YP_001893000.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|241666167|ref|YP_002984526.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] gi|187728409|gb|ACD29573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|240868194|gb|ACS65854.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 112 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI P + Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICVPECPVGAIYPAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N++ + + WP +T + LP A VK K + Sbjct: 61 VPADQQDFIALNAQLSRRADWPRLTKVQPPLPDHAHWAQVKDKRDALV 108 >gi|319943296|ref|ZP_08017579.1| ferredoxin [Lautropia mirabilis ATCC 51599] gi|319743838|gb|EFV96242.1| ferredoxin [Lautropia mirabilis ATCC 51599] Length = 107 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M ++V +NCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI + D Sbjct: 1 MAHIVLDNCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCVPECPAEAIVAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E ++ IN+E A WP IT K L A +G K + Sbjct: 61 VPGDQENFIAINAEKAPNWPAITRSKSPLEDADDWNGTPNKLQ 103 >gi|323496163|ref|ZP_08101221.1| ferredoxin [Vibrio sinaloensis DSM 21326] gi|323318440|gb|EGA71393.1| ferredoxin [Vibrio sinaloensis DSM 21326] Length = 107 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 VPADQKIYIELNAELAEHWPVQTEVKPAMDEAEKWNGVADKL 102 >gi|241767844|ref|ZP_04765425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] gi|241361074|gb|EER57771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] Length = 109 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+ENCI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVSENCIKCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++K+N++ +A W +IT +K +LP A + +G K + Sbjct: 61 LPADQIAFIKLNADLAFADGWKSITKRKPALPDADEWNGQPGKVKDL 107 >gi|126454614|ref|YP_001066809.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|167911570|ref|ZP_02498661.1| putative ferredoxin [Burkholderia pseudomallei 112] gi|167919580|ref|ZP_02506671.1| putative ferredoxin [Burkholderia pseudomallei BCC215] gi|242317545|ref|ZP_04816561.1| putative ferredoxin [Burkholderia pseudomallei 1106b] gi|126228256|gb|ABN91796.1| putative ferredoxin [Burkholderia pseudomallei 1106a] gi|242140784|gb|EES27186.1| putative ferredoxin [Burkholderia pseudomallei 1106b] Length = 112 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRHFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|148284852|ref|YP_001248942.1| ferredoxin [Orientia tsutsugamushi str. Boryong] gi|146740291|emb|CAM80671.1| Ferredoxin [Orientia tsutsugamushi str. Boryong] Length = 106 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT++C+ CK+TDCVEVCPVDCF+EGE + I P++CIDCGVCE ECPV AIKP+ E Sbjct: 1 MTYVVTDSCVKCKYTDCVEVCPVDCFHEGEMMVVIDPEKCIDCGVCEAECPVGAIKPEAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L W+++ E++ +WP I KK LP A K+EKY Sbjct: 61 -ELIKWIELGQEFSKKWPQILHKKAPLPQADLYKDKTNKFEKY 102 >gi|260221336|emb|CBA29796.1| Ferredoxin-1 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 109 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT++VTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHIVTEACIKCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPANAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + +N+E A W +IT +K LP A K + Sbjct: 61 APKDQQHMIALNAELARLPGWKSITKRKAPLPDADDWKDKTGKLSQLI 108 >gi|323494050|ref|ZP_08099166.1| ferredoxin [Vibrio brasiliensis LMG 20546] gi|323311677|gb|EGA64825.1| ferredoxin [Vibrio brasiliensis LMG 20546] Length = 107 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WP T K ++ A K +GV K + Sbjct: 61 VPDDQTIYIQLNAELAELWPVQTEVKPAMDEAEKWNGVPNKLDML 105 >gi|254505412|ref|ZP_05117559.1| ferredoxin [Vibrio parahaemolyticus 16] gi|219551529|gb|EED28507.1| ferredoxin [Vibrio parahaemolyticus 16] Length = 107 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECDAHAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 VPEDQKIYVELNAELAELWPVQTEVKPAMDEAEKWNGVPDKL 102 >gi|91983676|gb|ABE68844.1| FdxA [Pseudomonas sp. Q2-87] Length = 104 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 4 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 63 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG K Sbjct: 64 NFIELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 102 >gi|187729714|ref|YP_001837303.1| ferredoxin-like protein [Acidithiobacillus caldus] gi|167782099|gb|ACA00170.1| ferredoxin-like protein [Acidithiobacillus caldus] Length = 107 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NC+ CK+ DCV+VCPVDCF+EG+NFL I P CIDCGVCEPECP AI D++ Sbjct: 1 MTYVVTDNCVNCKYMDCVDVCPVDCFHEGKNFLVIDPSVCIDCGVCEPECPASAIYKDSD 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 E +L IN + ++ WP I KK+ LP A K DG+ K Sbjct: 61 LPDEFVAYLDINKKLSSSWPLIKYKKDELPEAHKWDGIPNK 101 >gi|91983692|gb|ABE68852.1| FdxA [Pseudomonas sp. F96.27] gi|91983702|gb|ABE68857.1| FdxA [Pseudomonas sp. P97.38] Length = 101 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGQE 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG K Sbjct: 61 NFIELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 99 >gi|189184160|ref|YP_001937945.1| ferredoxin [Orientia tsutsugamushi str. Ikeda] gi|189180931|dbj|BAG40711.1| ferredoxin [Orientia tsutsugamushi str. Ikeda] Length = 106 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT++C+ CK+TDCVEVCPVDCF+EGE + I P++CIDCGVCE ECPV AIKP+ E Sbjct: 1 MTYVVTDSCVKCKYTDCVEVCPVDCFHEGEMMVVIDPEKCIDCGVCEAECPVGAIKPEAE 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L W+++ E++ +WP I KK LP A K+EKY Sbjct: 61 -ELIKWIELGQEFSKKWPQILHKKAPLPQADLYKDETNKFEKY 102 >gi|315123428|ref|YP_004065434.1| putative ferredoxin [Pseudoalteromonas sp. SM9913] gi|315017188|gb|ADT70525.1| putative ferredoxin [Pseudoalteromonas sp. SM9913] Length = 107 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECAADAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP IT K + A +GV K + Sbjct: 61 LPESQKEFTQLNAELAEIWPRITQVKPAPEDADSWNGVANKLKLL 105 >gi|91983694|gb|ABE68853.1| FdxA [Pseudomonas sp. K94.37] Length = 101 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 74/99 (74%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 NFIELNAELAEIWPNITEKKDALPDAEEWDGKEGKIADL 99 >gi|58584826|ref|YP_198399.1| ferredoxin [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419142|gb|AAW71157.1| Ferredoxin [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 124 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + IN EY+ +WPNIT KK+ L +A K K K YF Sbjct: 61 IKDILELDEELLSNEQKTFKSFYNINIEYSQKWPNITAKKQPLHTAEKYKEKKDK-TAYF 119 Query: 105 SPN 107 + N Sbjct: 120 NEN 122 >gi|126441756|ref|YP_001059528.1| putative ferredoxin [Burkholderia pseudomallei 668] gi|217425596|ref|ZP_03457088.1| putative ferredoxin [Burkholderia pseudomallei 576] gi|254184452|ref|ZP_04891042.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|126221249|gb|ABN84755.1| putative ferredoxin [Burkholderia pseudomallei 668] gi|184214983|gb|EDU12026.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|217391373|gb|EEC31403.1| putative ferredoxin [Burkholderia pseudomallei 576] Length = 112 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRPFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|42520002|ref|NP_965917.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila melanogaster] gi|99035924|ref|ZP_01314971.1| hypothetical protein Wendoof_01000179 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|42409739|gb|AAS13851.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila melanogaster] Length = 124 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + +L+ IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 IKDILELDEELLSSEQKTFKLFYDINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|77362322|ref|YP_341896.1| putative ferredoxin [Pseudoalteromonas haloplanktis TAC125] gi|76877233|emb|CAI89450.1| putative ferredoxin [Pseudoalteromonas haloplanktis TAC125] Length = 107 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECSADAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + ++N+E A WP IT K + A + +G+ K + Sbjct: 61 LPESQQEFTELNAELALIWPRITQAKPAPADADEWNGIADKLK 103 >gi|84385231|ref|ZP_00988263.1| ferredoxin [Vibrio splendidus 12B01] gi|84379828|gb|EAP96679.1| ferredoxin [Vibrio splendidus 12B01] Length = 107 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV +NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVGDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K + A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKAPMDEAEKWNGVSDKL 102 >gi|332284971|ref|YP_004416882.1| ferredoxin [Pusillimonas sp. T7-7] gi|330428924|gb|AEC20258.1| ferredoxin [Pusillimonas sp. T7-7] Length = 107 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTENCI CK TDCV+VCPVDCF EG NFL I PDECIDC VC PECP +AI D Sbjct: 1 MTHVVTENCIKCKFTDCVDVCPVDCFREGANFLVIDPDECIDCAVCVPECPANAIFAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++++N+E ++ I K+ LP A +G+ K + Sbjct: 61 VPQDQISFIELNAELTPEFGMINRSKKPLPEADDWNGMPDKLKHL 105 >gi|148973892|ref|ZP_01811425.1| ferredoxin [Vibrionales bacterium SWAT-3] gi|145965589|gb|EDK30837.1| ferredoxin [Vibrionales bacterium SWAT-3] Length = 107 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV +NCI CK+TD V VCP D F+EG NF+ I+P ECIDCG+C PEC AI + E Sbjct: 1 MAFVVGDNCIQCKYTDFVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K ++ A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKPAMDDAEKWNGVPDKL 102 >gi|237812865|ref|YP_002897316.1| ferredoxin-1 [Burkholderia pseudomallei MSHR346] gi|237506519|gb|ACQ98837.1| ferredoxin-1 [Burkholderia pseudomallei MSHR346] Length = 112 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 1 MTFVVMEGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 61 LPDDQRPFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 107 >gi|58698109|ref|ZP_00373032.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila ananassae] gi|225630003|ref|YP_002726794.1| ferredoxin, 4Fe-4S [Wolbachia sp. wRi] gi|58535355|gb|EAL59431.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Drosophila ananassae] gi|225591984|gb|ACN95003.1| ferredoxin, 4Fe-4S [Wolbachia sp. wRi] Length = 124 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 VKDILELDEELLSSEQKTFKSFYNINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|86145740|ref|ZP_01064069.1| ferredoxin [Vibrio sp. MED222] gi|218676912|ref|YP_002395731.1| Ferredoxin [Vibrio splendidus LGP32] gi|85836439|gb|EAQ54568.1| ferredoxin [Vibrio sp. MED222] gi|218325180|emb|CAV27087.1| Ferredoxin [Vibrio splendidus LGP32] Length = 107 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VV +NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C PEC AI + Sbjct: 1 MAFVVGDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVPECDAQAIFQEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 ++++++N+E A WP T K + A K +GV K Sbjct: 61 LPEDQKIFIEVNAELAEIWPVQTEVKAPMDEAEKWNGVADKL 102 >gi|117573304|gb|ABK40828.1| ferredoxin [Pseudomonas sp. C6-16] gi|117573310|gb|ABK40831.1| ferredoxin [Pseudomonas sp. C6-9] gi|117573314|gb|ABK40833.1| ferredoxin [Pseudomonas sp. S7-29] gi|117573316|gb|ABK40834.1| ferredoxin [Pseudomonas sp. S7-42] gi|117573318|gb|ABK40835.1| ferredoxin [Pseudomonas sp. S7-46] gi|117573320|gb|ABK40836.1| ferredoxin [Pseudomonas sp. S7-52] gi|117573326|gb|ABK40839.1| ferredoxin [Pseudomonas sp. S8-151] gi|117573328|gb|ABK40840.1| ferredoxin [Pseudomonas sp. C6-11] Length = 99 Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK++LP A + DG + K + Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDL 97 >gi|167627085|ref|YP_001677585.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667647|ref|ZP_04755225.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876192|ref|ZP_05248902.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597086|gb|ABZ87084.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842213|gb|EET20627.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 107 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VVTENCI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPVDAIK D Sbjct: 1 MPFVVTENCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVDAIKSSDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E L +N E A+ WPNI K + A V K + Sbjct: 61 LTESQEQMLDLNRELASIWPNIVEKCDPCEDADNWASVPDKLK 103 >gi|332992178|gb|AEF02233.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Alteromonas sp. SN2] Length = 108 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VVT+NCI CK+TDCV VCPVD F+EG NFLAI P CIDC +C PECP DAI DT Sbjct: 1 MTFVVTDNCINCKYTDCVAVCPVDAFFEGPNFLAIDPAICIDCALCVPECPADAIVQDTH 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + +L IN E A +WPNI K A +GV K Sbjct: 61 LTDAQKPYLAINEELAAKWPNIIELKAPPEDADVWNGVPDKL 102 >gi|319793283|ref|YP_004154923.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315595746|gb|ADU36812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 109 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+E CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVSEACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++KIN+E A W +IT +K +LP A + K + Sbjct: 61 LPANQIAFIKINAELALADGWKSITKRKPALPDAEEWKDKTDKVGELV 108 >gi|91199775|emb|CAI78130.1| putative ferredoxin [Streptomyces ambofaciens ATCC 23877] gi|126347479|emb|CAJ89187.1| putative ferredoxin [Streptomyces ambofaciens ATCC 23877] Length = 118 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE- 60 TYVV E CI C+ TDCV+VCPVDCF+ GEN L IHP ECIDCG C PECPV AI ++E Sbjct: 9 TYVVAEPCIRCRTTDCVDVCPVDCFHAGENMLVIHPYECIDCGACVPECPVSAIFEESEL 68 Query: 61 -PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + ++N EYA +WP IT+K ++ V+ K +++F+P PG Sbjct: 69 PAKWGEYTELNLEYADKWPVITSKADAPSDWENWRDVEPK-KQHFNPAPG 117 >gi|239815386|ref|YP_002944296.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239801963|gb|ACS19030.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 109 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VV+E CI CK+TDCV+VCPVDCF EG N L I PDECIDC VC PECPV+AI D Sbjct: 1 MTHVVSEACIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEY--ATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++K+N+E A W +IT +K +LP A + K + Sbjct: 61 LPANQIAFIKLNAELAVADGWKSITKRKPALPDAEEWKDKTDKVGELV 108 >gi|27367705|ref|NP_763232.1| ferredoxin [Vibrio vulnificus CMCP6] gi|37675831|ref|NP_936227.1| ferredoxin [Vibrio vulnificus YJ016] gi|320157989|ref|YP_004190367.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Vibrio vulnificus MO6-24/O] gi|27359277|gb|AAO08222.1|AE016812_204 Ferredoxin [Vibrio vulnificus CMCP6] gi|37200370|dbj|BAC96197.1| ferredoxin [Vibrio vulnificus YJ016] gi|319933301|gb|ADV88164.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Vibrio vulnificus MO6-24/O] Length = 107 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQVIYKELNAELAELWPVQTEVKPAMDEAEKWNGVPNKLDML 105 >gi|268317837|ref|YP_003291556.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335371|gb|ACY49168.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodothermus marinus DSM 4252] Length = 118 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 61/108 (56%), Positives = 68/108 (62%), Gaps = 7/108 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVD FYEG NFLAIHPDECIDC C P CP +AI PD E Sbjct: 1 MPYVVCEPCINCKYTDCVEVCPVDAFYEGPNFLAIHPDECIDCNACVPVCPTEAIYPDDE 60 Query: 61 --PGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEK 102 + +++ N A QW NIT KKE LP A + K EK Sbjct: 61 VPEEWQHYIEWNRYLAEQWKAQGFNITQKKEPLPEAEEWRNRP-KSEK 107 >gi|28897729|ref|NP_797334.1| ferredoxin [Vibrio parahaemolyticus RIMD 2210633] gi|153838666|ref|ZP_01991333.1| ferredoxin-1 [Vibrio parahaemolyticus AQ3810] gi|260363840|ref|ZP_05776595.1| ferredoxin-1 [Vibrio parahaemolyticus K5030] gi|260876900|ref|ZP_05889255.1| ferredoxin-1 [Vibrio parahaemolyticus AN-5034] gi|260897958|ref|ZP_05906454.1| ferredoxin-1 [Vibrio parahaemolyticus Peru-466] gi|260902160|ref|ZP_05910555.1| ferredoxin-1 [Vibrio parahaemolyticus AQ4037] gi|28805942|dbj|BAC59218.1| ferredoxin [Vibrio parahaemolyticus RIMD 2210633] gi|149747944|gb|EDM58810.1| ferredoxin-1 [Vibrio parahaemolyticus AQ3810] gi|308085488|gb|EFO35183.1| ferredoxin-1 [Vibrio parahaemolyticus Peru-466] gi|308093644|gb|EFO43339.1| ferredoxin-1 [Vibrio parahaemolyticus AN-5034] gi|308108295|gb|EFO45835.1| ferredoxin-1 [Vibrio parahaemolyticus AQ4037] gi|308113880|gb|EFO51420.1| ferredoxin-1 [Vibrio parahaemolyticus K5030] Length = 107 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQTIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLDML 105 >gi|268318191|ref|YP_003291910.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodothermus marinus DSM 4252] gi|21389190|gb|AAM50525.1|AF515798_1 ferredoxin [Rhodothermus marinus] gi|262335725|gb|ACY49522.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodothermus marinus DSM 4252] Length = 118 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 6/103 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAIHPDECIDC C P CPV+AI PD E Sbjct: 1 MPYVVCEPCINCKYTDCVEVCPVDCFYEGPNFLAIHPDECIDCNACVPTCPVEAIYPDDE 60 Query: 61 --PGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVK 97 + +++ N A QW NIT KK LP A + Sbjct: 61 VPEEWQHYIEWNRYLAEQWKAMGYNITEKKGPLPDAEEWRNRP 103 >gi|299069168|emb|CBJ40421.1| Ferredoxin 1 [Ralstonia solanacearum CMR15] Length = 112 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVT++CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 1 MPYVVTQSCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDTCIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|57339928|gb|AAW49951.1| hypothetical protein FTT1764 [synthetic construct] Length = 142 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 61/110 (55%), Positives = 68/110 (61%), Gaps = 3/110 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VVTE+CI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPV+AIK D Sbjct: 27 MPFVVTESCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVNAIKSSDD 86 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E L +N E A WPNI K E A V K KY P Sbjct: 87 LSENEEQMLDLNRELAGIWPNIVEKCEPCEDADNWASVPDKL-KYLEKYP 135 >gi|300693746|ref|YP_003749719.1| ferredoxin 1 [Ralstonia solanacearum PSI07] gi|299075783|emb|CBJ35088.1| Ferredoxin 1 [Ralstonia solanacearum PSI07] Length = 112 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI + D Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|117573312|gb|ABK40832.1| ferredoxin [Pseudomonas sp. P97.39] gi|117573330|gb|ABK40841.1| ferredoxin [Pseudomonas sp. F96.26] gi|117573336|gb|ABK40844.1| ferredoxin [Pseudomonas sp. P97.1] gi|117573338|gb|ABK40845.1| ferredoxin [Pseudomonas sp. P97.27] Length = 99 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGQENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK++LP A + DG K Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 97 >gi|91983690|gb|ABE68851.1| FdxA [Pseudomonas sp. P12] Length = 101 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 2/99 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLE 64 +NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E Sbjct: 1 DNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGME 60 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WPNIT KK++LP A + DG + K Sbjct: 61 NFIVLNAELAEIWPNITEKKDALPDAEEWDGKEGKIADL 99 >gi|328473289|gb|EGF44137.1| ferredoxin [Vibrio parahaemolyticus 10329] Length = 107 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQIIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLDML 105 >gi|117573306|gb|ABK40829.1| ferredoxin [Pseudomonas sp. C6-23] gi|117573308|gb|ABK40830.1| ferredoxin [Pseudomonas sp. C6-2] Length = 99 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E ++ + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPEEMQEF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N E A WPNIT KK+ LP A + DGVK K + Sbjct: 61 IQLNVELAEIWPNITEKKDPLPDAEEWDGVKGKIKDL 97 >gi|56478031|ref|YP_159620.1| ferredoxin [Aromatoleum aromaticum EbN1] gi|56314074|emb|CAI08719.1| ferredoxin [Aromatoleum aromaticum EbN1] Length = 107 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTE CI CKHTDCV+VCP D F EG NFL I P+ECIDC +C ECPVDAI D Sbjct: 1 MTYVVTEACIKCKHTDCVDVCPTDAFREGPNFLVIDPEECIDCTLCVAECPVDAIYADDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ +N E A +W I K + A VK K + Sbjct: 61 VPDDQRQFIALNEELAKEWKPIVEVKPAPEDAGMWATVKDKLK 103 >gi|17549028|ref|NP_522368.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17431279|emb|CAD17958.1| probable ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 112 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PD CIDC +C PECPV AI + D Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDTCIDCSICAPECPVGAIHAEAD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ +N++ + + WP +T + L A+ VK K + Sbjct: 61 VPADQREFIALNAQLSRRADWPRLTQVQPPLADHARWAQVKDKRDALI 108 >gi|153834717|ref|ZP_01987384.1| ferredoxin-1 [Vibrio harveyi HY01] gi|156973800|ref|YP_001444707.1| ferredoxin [Vibrio harveyi ATCC BAA-1116] gi|148868856|gb|EDL67920.1| ferredoxin-1 [Vibrio harveyi HY01] gi|156525394|gb|ABU70480.1| hypothetical protein VIBHAR_01510 [Vibrio harveyi ATCC BAA-1116] Length = 107 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPEDQVIYKELNAELAEIWPVQTEVKPAMDEAEKWNGVPNKLDML 105 >gi|89901238|ref|YP_523709.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89345975|gb|ABD70178.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 109 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 56/108 (51%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+ VTE CI CK+TDCV+VCPVDCF EG NFL I PDECIDC VC PECPV+AI D Sbjct: 1 MTHTVTEACIKCKYTDCVDVCPVDCFREGPNFLTIDPDECIDCAVCIPECPVNAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + KIN+E A W IT +K +LP A + K Sbjct: 61 VPKDQQHMTKINAELAKLPGWKTITKRKPALPEAEEWKDKTGKLPYLI 108 >gi|170726752|ref|YP_001760778.1| molydopterin dinucleotide-binding region [Shewanella woodyi ATCC 51908] gi|169812099|gb|ACA86683.1| molydopterin dinucleotide-binding region [Shewanella woodyi ATCC 51908] Length = 1299 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M YVVT CI KHT CV+VCPV+ F EGE L I PDECI C C ECP AI P+ Sbjct: 1 MAYVVTGACIGDKHTSCVDVCPVNAFREGEEMLYIDPDECISCNACLTECPSLAIFPEAS 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLP 88 ++ IN+ + + P IT + P Sbjct: 61 VPEDQLQYININAIESKKHPVITERINKQP 90 >gi|163839921|ref|YP_001624327.1| N-succinyldiaminopimelate aminotransferase [Renibacterium salmoninarum ATCC 33209] gi|162953397|gb|ABY22912.1| ferredoxin [Renibacterium salmoninarum ATCC 33209] Length = 539 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 10/109 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 42 TYVIAQPCVDIKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDDV 101 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ + S AAK+ G Y S P Sbjct: 102 PEEWADYYKANVEFFNE-------IGSPGGAAKV-GSTGTDHPYISALP 142 >gi|163803681|ref|ZP_02197543.1| ferredoxin [Vibrio sp. AND4] gi|159172520|gb|EDP57383.1| ferredoxin [Vibrio sp. AND4] Length = 107 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L+ ++N+E A WP T K ++ A K +GV K + Sbjct: 61 LPDDQVLYKELNAELAEIWPVQTEIKPAMDEAEKWNGVPNKLDML 105 >gi|91983696|gb|ABE68854.1| FdxA [Pseudomonas sp. K93.2] gi|117573334|gb|ABK40843.1| ferredoxin [Pseudomonas sp. K94.38] Length = 99 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK++LP A + DG + K Sbjct: 61 IELNAELAEIWPNITEKKDALPDAEEWDGKEGKIADL 97 >gi|117573340|gb|ABK40846.1| ferredoxin [Pseudomonas sp. Q86-87] Length = 99 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK++LP A + DG K Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKPGKIADL 97 >gi|192359344|ref|YP_001982818.1| 7-Fe ferredoxin [Cellvibrio japonicus Ueda107] gi|190685509|gb|ACE83187.1| 7-Fe ferredoxin [Cellvibrio japonicus Ueda107] Length = 107 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 62/105 (59%), Positives = 75/105 (71%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV ENCI CKHTDCVEVCPVDCFYEG NFL I+PDECIDC +CEPECPV AI + E Sbjct: 1 MTFVVGENCIKCKHTDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPVSAIFSEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++L++N+E + WPNIT K++ AA DGV K + Sbjct: 61 LPEDQAVFLELNAELSQVWPNITEIKDAPADAADWDGVPGKLQHL 105 >gi|194288740|ref|YP_002004647.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193222575|emb|CAQ68578.1| putative FERREDOXIN [Cupriavidus taiwanensis LMG 19424] Length = 109 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 4/104 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKY 100 +L +N+E + + W +T K LP + G + Sbjct: 61 LPEDQRHFLALNAELSRRPDWLPLTQAKGPLPDHEQWAGHPDRL 104 >gi|134095508|ref|YP_001100583.1| ferredoxin [Herminiimonas arsenicoxydans] gi|133739411|emb|CAL62461.1| Ferredoxin 1 [Herminiimonas arsenicoxydans] Length = 116 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 52/108 (48%), Positives = 62/108 (57%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV VCP+DCF EG NFL I+PDECIDC +C ECPV AI D E Sbjct: 1 MTFVVTEPCIQCKYTDCVTVCPMDCFMEGPNFLVINPDECIDCSMCVAECPVGAIVGDRE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 +L++N + W IT K +LP K K Sbjct: 61 LAADQAHFLELNRSLSAHPDWQRITMSKPALPEHEKWARTTTKLSLLL 108 >gi|119474975|ref|ZP_01615328.1| ferredoxin, 4Fe-4S [marine gamma proteobacterium HTCC2143] gi|119451178|gb|EAW32411.1| ferredoxin, 4Fe-4S [marine gamma proteobacterium HTCC2143] Length = 112 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 2/106 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVTE CI CK TDCV+VCPVDCF+EG NFL I+PD CIDC +C PECPVDAI D Sbjct: 1 MTFVVTEQCIKCKFTDCVDVCPVDCFHEGPNFLVINPDGCIDCALCIPECPVDAIYEESD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++KIN++ + +WP I ++ L A K Sbjct: 61 LPDEFQEYIKINADLSARWPEILATQDPLEDAEDWADKPDKRGALI 106 >gi|332532550|ref|ZP_08408427.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas haloplanktis ANT/505] gi|332037971|gb|EGI74419.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudoalteromonas haloplanktis ANT/505] Length = 107 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 2/105 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVTENCI CK+TDCV VCP D F+EG NFLAI P +CIDCG+C PEC DAI + E Sbjct: 1 MAFVVTENCIKCKYTDCVSVCPADAFFEGPNFLAISPIDCIDCGLCVPECSADAIYQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + + ++N+E A WP IT K + A +G+ K + Sbjct: 61 LPESQKEFTELNAELALVWPRITEVKPAPEDADVWNGIDDKLKLL 105 >gi|309782798|ref|ZP_07677519.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] gi|308918576|gb|EFP64252.1| ferredoxin, 4Fe-4S [Ralstonia sp. 5_7_47FAA] Length = 112 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M YVVTE+CI CK+TDCV VCP+DCF+ G NFL I PDECIDC +C PECPV AI P + Sbjct: 1 MPYVVTESCIQCKYTDCVAVCPMDCFHAGPNFLVIDPDECIDCSICVPECPVGAIYPAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +N++ + + WP +T + L A VK K + Sbjct: 61 VPADQQDFIALNAQLSRRADWPRLTKVQAPLQDHAHWAQVKDKRDALV 108 >gi|49080100|gb|AAT49971.1| PA2715 [synthetic construct] Length = 113 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 58/107 (54%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 G ++ +N E A W IT KK + G+ K + Sbjct: 61 VPLGQRQFIALNGELAAHPNWTQITRKKPAPDDHDAWFGLPGKLAEL 107 >gi|134094844|ref|YP_001099919.1| ferredoxin [Herminiimonas arsenicoxydans] gi|133738747|emb|CAL61794.1| Ferredoxin 1 [Herminiimonas arsenicoxydans] Length = 109 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTE+CI CK+TDCV VCP+DCF+EG NFLAI+PDECIDC VC PECPV+AI + Sbjct: 1 MPFVVTESCIQCKYTDCVAVCPMDCFFEGPNFLAINPDECIDCSVCVPECPVNAIIGAAE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P + ++++N + W I +KE LP AK +K K Sbjct: 61 ISPEQQHFVELNRTLSRHPDWKRIRQQKEPLPEHAKWAELKDKLPLLL 108 >gi|319941592|ref|ZP_08015918.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] gi|319804962|gb|EFW01804.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] Length = 110 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VV E CI CK TDCV+VCPVDCF EG NFL I PDECIDC VC PECP AI D Sbjct: 1 MPHVVCEACIGCKRTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPEAAIYAEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++++N+E A +WP+IT +K A + GV K + Sbjct: 61 VPEDQKEFIELNAELAREWPSITHRKPYADDADEWRGVPNKIK 103 >gi|300311230|ref|YP_003775322.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] gi|300074015|gb|ADJ63414.1| ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 112 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 52/111 (46%), Positives = 63/111 (56%), Gaps = 4/111 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VVT++CI CK+TDCV VCP+DCF EG NFL I PD CIDC +C PECPV AI D Sbjct: 1 MPFVVTDSCIQCKYTDCVSVCPMDCFVEGPNFLVIDPDGCIDCSMCVPECPVGAIYNATD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 L + ++N+ + Q W IT K LP K V K P Sbjct: 61 LPATLAHFEQLNARLSRQPGWKPITQAKPPLPGHEKWKDVADKLPLLEQPQ 111 >gi|152982564|ref|YP_001353330.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282641|gb|ABR91051.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 114 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VVTE CI CK+TDCV VCP+DCF+EG NFLAI+PDECIDC VC PECPV+AI + Sbjct: 1 MPFVVTEACIQCKYTDCVVVCPMDCFFEGPNFLAINPDECIDCSVCVPECPVNAIIGATE 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P + ++ +N E + W I+ KE +P K VK K Sbjct: 61 VAPEQQHFVALNRELSQHPDWKRISKPKEPMPGHEKWAQVKDKLPLLV 108 >gi|269958328|ref|YP_003328115.1| ferredoxin [Anaplasma centrale str. Israel] gi|269848157|gb|ACZ48801.1| ferredoxin [Anaplasma centrale str. Israel] Length = 123 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEGEN L I PD+CIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGENMLVIDPDQCIDCGVCVPECPVDAIVSDEF 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + KIN+E++ +W NIT K + A + K +YF Sbjct: 61 IEDIISCDDSTLNERQQSLKAFHKINAEFSKKWKNITASKPPMEEAERYKDDLNK-AQYF 119 Query: 105 SPN 107 N Sbjct: 120 KEN 122 >gi|117573292|gb|ABK40822.1| ferredoxin [Pseudomonas sp. C10-186] gi|117573294|gb|ABK40823.1| ferredoxin [Pseudomonas sp. C10-189] gi|117573296|gb|ABK40824.1| ferredoxin [Pseudomonas sp. C10-190] gi|117573302|gb|ABK40827.1| ferredoxin [Pseudomonas sp. C10-205] Length = 99 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP--GLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPTGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK++LP A + DG K Sbjct: 61 IELNAELADIWPNITEKKDALPDAEEWDGKTGKIADL 97 >gi|50956566|gb|AAT90813.1| probable ferredoxin [uncultured proteobacterium QS1] Length = 124 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+NCI C+HT CV++CP D F+ G NF+ I PDEC+DCG+C PECP +AI+P+++ Sbjct: 1 MTYVVTDNCIQCRHTSCVDICPADAFHLGPNFIVISPDECVDCGLCLPECPEEAIEPESQ 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 +L++N+E A +WP I + E LP K + K Sbjct: 61 LNDSNYHFLRLNAELAERWPVILQRIEPLPDYQKWSRQENKL 102 >gi|15597911|ref|NP_251405.1| ferredoxin [Pseudomonas aeruginosa PAO1] gi|107102238|ref|ZP_01366156.1| hypothetical protein PaerPA_01003290 [Pseudomonas aeruginosa PACS2] gi|116050700|ref|YP_790480.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|218891124|ref|YP_002439990.1| putative ferredoxin [Pseudomonas aeruginosa LESB58] gi|254235694|ref|ZP_04929017.1| hypothetical protein PACG_01630 [Pseudomonas aeruginosa C3719] gi|254241140|ref|ZP_04934462.1| hypothetical protein PA2G_01829 [Pseudomonas aeruginosa 2192] gi|296388818|ref|ZP_06878293.1| putative ferredoxin [Pseudomonas aeruginosa PAb1] gi|313107772|ref|ZP_07793951.1| putative ferredoxin [Pseudomonas aeruginosa 39016] gi|9948790|gb|AAG06103.1|AE004699_8 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|115585921|gb|ABJ11936.1| putative ferredoxin [Pseudomonas aeruginosa UCBPP-PA14] gi|126167625|gb|EAZ53136.1| hypothetical protein PACG_01630 [Pseudomonas aeruginosa C3719] gi|126194518|gb|EAZ58581.1| hypothetical protein PA2G_01829 [Pseudomonas aeruginosa 2192] gi|218771349|emb|CAW27116.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] gi|310880453|gb|EFQ39047.1| putative ferredoxin [Pseudomonas aeruginosa 39016] Length = 112 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 58/107 (54%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 G ++ +N E A W IT KK + G+ K + Sbjct: 61 VPLGQRQFIALNGELAAHPNWTQITRKKPAPDDHDAWFGLPGKLAEL 107 >gi|239948395|ref|ZP_04700148.1| ferredoxin [Rickettsia endosymbiont of Ixodes scapularis] gi|239922671|gb|EER22695.1| ferredoxin [Rickettsia endosymbiont of Ixodes scapularis] Length = 109 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 62/107 (57%), Positives = 77/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCIPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT KK +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKDKFNKYIN 106 >gi|56417282|ref|YP_154356.1| ferredoxin II [Anaplasma marginale str. St. Maries] gi|222475646|ref|YP_002564063.1| ferredoxin II (fdxA) [Anaplasma marginale str. Florida] gi|254995448|ref|ZP_05277638.1| ferredoxin II (fdxA) [Anaplasma marginale str. Mississippi] gi|255003639|ref|ZP_05278603.1| ferredoxin II (fdxA) [Anaplasma marginale str. Puerto Rico] gi|255004765|ref|ZP_05279566.1| ferredoxin II (fdxA) [Anaplasma marginale str. Virginia] gi|56388514|gb|AAV87101.1| ferredoxin II [Anaplasma marginale str. St. Maries] gi|222419784|gb|ACM49807.1| ferredoxin II (fdxA) [Anaplasma marginale str. Florida] Length = 123 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEGEN L I PD+CIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGENMLVIDPDQCIDCGVCVPECPVDAIVSDEF 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + KIN+E++ +W NIT K + A + K +YF Sbjct: 61 IEDIISCDDSALNERQQSLKAFHKINAEFSKKWKNITASKPPMEEAERYKDDLNK-AQYF 119 Query: 105 SPN 107 N Sbjct: 120 KEN 122 >gi|154248128|ref|YP_001419086.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162213|gb|ABS69429.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xanthobacter autotrophicus Py2] Length = 110 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 58/87 (66%), Positives = 64/87 (73%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTENCI C + DCV VCPVDCFY GEN L IHPDECIDCGVCEPECP AI PD++ Sbjct: 1 MAYVVTENCIRCTYMDCVSVCPVDCFYAGENMLVIHPDECIDCGVCEPECPAAAIFPDSD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESL 87 P W +N++YA QWPNIT K Sbjct: 61 PRAGDWAALNAQYAAQWPNITEKGAPP 87 >gi|225677141|ref|ZP_03788140.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590808|gb|EEH12036.1| ferredoxin, 4Fe-4S [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 124 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDC EVCPVDCFYEG+N L I+PDECIDCGVC PECPVDAI D Sbjct: 1 MTHFVTDKCIKCKYTDCAEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + + + IN EY+ +WPNIT KK+ L +A + K K YF Sbjct: 61 IKDILELDEELLNSEQKIFKSFYNINVEYSQKWPNITAKKQPLYTAEEYKEKKDK-TAYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|32470342|ref|NP_863589.1| ferredoxin [Acidithiobacillus ferrooxidans] gi|1657802|gb|AAC80173.1| ferredoxin [Acidithiobacillus ferrooxidans] Length = 122 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 56/95 (58%), Positives = 68/95 (71%), Gaps = 2/95 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVTE CI CK+TDCV VCPVDCF+EG NFLAI PDECIDC +C PECPVDAI D + Sbjct: 1 MTHVVTEACIRCKYTDCVTVCPVDCFHEGPNFLAIDPDECIDCTLCVPECPVDAIFRDVD 60 Query: 61 PGL--ELWLKINSEYATQWPNITTKKESLPSAAKM 93 E + ++N+ A +WP I KK +LP A + Sbjct: 61 LPDAVEKYPELNARLARRWPVIIQKKPALPDAEQW 95 >gi|115379402|ref|ZP_01466505.1| ferredoxin [Stigmatella aurantiaca DW4/3-1] gi|310822281|ref|YP_003954639.1| ferrodoxin, 4fe-4S [Stigmatella aurantiaca DW4/3-1] gi|115363589|gb|EAU62721.1| ferredoxin [Stigmatella aurantiaca DW4/3-1] gi|309395353|gb|ADO72812.1| Ferrodoxin, 4Fe-4S [Stigmatella aurantiaca DW4/3-1] Length = 113 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 4/114 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV E CI CK+TDCVEVCPV+CFYEG NFL IHPDECIDCG CEP CP AI P++E Sbjct: 1 MAYVVAEPCIKCKYTDCVEVCPVNCFYEGANFLVIHPDECIDCGACEPVCPTKAIFPESE 60 Query: 61 --PGLELWLKINSEYAT-QWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + + +N + + WPN+ K LP A + K K PG + Sbjct: 61 LPDKWKEYKDLNDKLSKGGWPNLAEKLSELPEADEYKDKKDKR-ALLDTAPGKR 113 >gi|56708759|ref|YP_170655.1| ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89255529|ref|YP_512890.1| ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110671231|ref|YP_667788.1| ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115314046|ref|YP_762769.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118498303|ref|YP_899353.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. novicida U112] gi|134301185|ref|YP_001121153.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. tularensis WY96-3418] gi|167010305|ref|ZP_02275236.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. holarctica FSC200] gi|169656480|ref|YP_001427532.2| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187930966|ref|YP_001890950.1| ferredoxin-1 [Francisella tularensis subsp. mediasiatica FSC147] gi|194323887|ref|ZP_03057662.1| ferredoxin-1 [Francisella tularensis subsp. novicida FTE] gi|208780133|ref|ZP_03247476.1| ferredoxin-1 [Francisella novicida FTG] gi|224457976|ref|ZP_03666449.1| ferredoxin-1 [Francisella tularensis subsp. tularensis MA00-2987] gi|254366956|ref|ZP_04982993.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|254368509|ref|ZP_04984526.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|254371377|ref|ZP_04987378.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|254371971|ref|ZP_04987464.1| ferredoxin [Francisella tularensis subsp. novicida GA99-3549] gi|254375113|ref|ZP_04990593.1| 4Fe-4S binding domain protein [Francisella novicida GA99-3548] gi|254875633|ref|ZP_05248343.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|290954290|ref|ZP_06558911.1| ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|295312297|ref|ZP_06803087.1| ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|54112673|gb|AAV28970.1| NT02FT0365 [synthetic construct] gi|56605251|emb|CAG46397.1| Ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89143360|emb|CAJ78530.1| Ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110321564|emb|CAL09780.1| Ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115128945|gb|ABI82132.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118424209|gb|ABK90599.1| 4Fe-4S ferredoxin [Francisella novicida U112] gi|134048962|gb|ABO46033.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134252783|gb|EBA51877.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|151569616|gb|EDN35270.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|151569702|gb|EDN35356.1| ferredoxin [Francisella novicida GA99-3549] gi|151572831|gb|EDN38485.1| 4Fe-4S binding domain protein [Francisella novicida GA99-3548] gi|157121403|gb|EDO65604.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|164551548|gb|ABU60576.2| 4Fe-4S binding domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187711875|gb|ACD30172.1| ferredoxin-1 [Francisella tularensis subsp. mediasiatica FSC147] gi|194321784|gb|EDX19267.1| ferredoxin-1 [Francisella tularensis subsp. novicida FTE] gi|208744137|gb|EDZ90438.1| ferredoxin-1 [Francisella novicida FTG] gi|254841632|gb|EET20068.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|282160082|gb|ADA79473.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. tularensis NE061598] gi|332184867|gb|AEE27121.1| Ferredoxin [Francisella cf. novicida 3523] gi|332679040|gb|AEE88169.1| Ferredoxin [Francisella cf. novicida Fx1] Length = 107 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 58/103 (56%), Positives = 66/103 (64%), Gaps = 2/103 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VVTE+CI CK+ DCVEVCPVDCFYEG N L I+PDECIDC +CEPECPV+AIK D Sbjct: 1 MPFVVTESCIKCKYGDCVEVCPVDCFYEGPNMLVINPDECIDCALCEPECPVNAIKSSDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 E L +N E A WPNI K E A V K + Sbjct: 61 LSENEEQMLDLNRELAGIWPNIVEKCEPCEDADNWASVPDKLK 103 >gi|91206087|ref|YP_538442.1| ferredoxin [Rickettsia bellii RML369-C] gi|157826613|ref|YP_001495677.1| ferredoxin [Rickettsia bellii OSU 85-389] gi|122425218|sp|Q1RH11|FER_RICBR RecName: Full=Ferredoxin gi|91069631|gb|ABE05353.1| Ferredoxin [Rickettsia bellii RML369-C] gi|157801917|gb|ABV78640.1| Ferredoxin [Rickettsia bellii OSU 85-389] Length = 107 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 62/106 (58%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP+T Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPET- 59 Query: 61 PGLELWLKINSEYA--TQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 P L W++ + +W IT KK +LP A K K K+ KY Sbjct: 60 PELIEWVERAKHFIEHEKWQVITKKKPALPDADKFKDEKDKFNKYI 105 >gi|117573332|gb|ABK40842.1| ferredoxin [Pseudomonas sp. K93.52] Length = 99 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++N+E A WPNIT KK+ +P A + DG K Sbjct: 61 IELNAELADVWPNITEKKDPMPGAEEWDGKTGKIADL 97 >gi|157826297|ref|YP_001494017.1| ferredoxin [Rickettsia akari str. Hartford] gi|157800255|gb|ABV75509.1| Ferredoxin [Rickettsia akari str. Hartford] Length = 109 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT K +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKNKPALPDADKFKDEKNKFNKYIN 106 >gi|67459707|ref|YP_247331.1| ferredoxin [Rickettsia felis URRWXCal2] gi|75535902|sp|Q4UJX3|FER_RICFE RecName: Full=Ferredoxin gi|67005240|gb|AAY62166.1| Ferredoxin [Rickettsia felis URRWXCal2] Length = 109 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 3/107 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVV + C+ CK+TDCV+VCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVNDECVKCKYTDCVDVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L W++ ++ W NIT KK +LP A K K K+ KY + Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKNKFNKYIN 106 >gi|152987732|ref|YP_001349347.1| putative ferredoxin [Pseudomonas aeruginosa PA7] gi|150962890|gb|ABR84915.1| probable ferredoxin [Pseudomonas aeruginosa PA7] Length = 112 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VV E CI CKHTDCVEVCPVDCFYEG NFL IHP+ECIDC +CEPECPV AI+ + E Sbjct: 1 MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPEECIDCALCEPECPVAAIRAEDE 60 Query: 61 --PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 G ++ +N E A W IT KK + G+ K + Sbjct: 61 VPLGQRQFIGLNGELAAHPNWTRITRKKPAPDDHDAWFGMPGKLAEL 107 >gi|83815572|ref|YP_444389.1| ferredoxin [Salinibacter ruber DSM 13855] gi|83756966|gb|ABC45079.1| ferredoxin [Salinibacter ruber DSM 13855] Length = 148 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 55/111 (49%), Positives = 65/111 (58%), Gaps = 6/111 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI P+ Sbjct: 35 MPYVVAEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPEDQ 94 Query: 60 -EPGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEKYFS 105 E + + N A QW N+T K L A + ++ E + Sbjct: 95 LPEEWEHYTQWNEYLANQWRDLGYNVTEKTGPLDDAEAWEDAEKSEEDILT 145 >gi|157829118|ref|YP_001495360.1| ferredoxin [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933842|ref|YP_001650631.1| ferredoxin [Rickettsia rickettsii str. Iowa] gi|157801599|gb|ABV76852.1| ferredoxin [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908929|gb|ABY73225.1| ferredoxin [Rickettsia rickettsii str. Iowa] Length = 116 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 76/110 (69%), Gaps = 7/110 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYI 109 >gi|117573298|gb|ABK40825.1| ferredoxin [Pseudomonas sp. C10-197] gi|117573300|gb|ABK40826.1| ferredoxin [Pseudomonas sp. C10-204] gi|117573322|gb|ABK40837.1| ferredoxin [Pseudomonas sp. S8-110] gi|117573324|gb|ABK40838.1| ferredoxin [Pseudomonas sp. S8-130] Length = 99 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELW 66 CI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E + Sbjct: 1 CIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGMENF 60 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + +N+E A WPNIT KK++LP A + DG + K Sbjct: 61 IVLNAELADIWPNITEKKDALPDAEEWDGKEGKIADL 97 >gi|157964977|ref|YP_001499801.1| ferredoxin [Rickettsia massiliae MTU5] gi|157844753|gb|ABV85254.1| Ferredoxin [Rickettsia massiliae MTU5] Length = 116 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 76/110 (69%), Gaps = 7/110 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKPALPDADKFKDEKDKFNKYI 109 >gi|15893206|ref|NP_360920.1| ferredoxin [Rickettsia conorii str. Malish 7] gi|81774396|sp|Q92G41|FER_RICCN RecName: Full=Ferredoxin gi|15620421|gb|AAL03821.1| ferredoxin [Rickettsia conorii str. Malish 7] Length = 116 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 76/110 (69%), Gaps = 7/110 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYI 109 >gi|68171341|ref|ZP_00544738.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ehrlichia chaffeensis str. Sapulpa] gi|88658543|ref|YP_506870.1| ferredoxin A [Ehrlichia chaffeensis str. Arkansas] gi|67999239|gb|EAM85892.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ehrlichia chaffeensis str. Sapulpa] gi|88600000|gb|ABD45469.1| ferredoxin A [Ehrlichia chaffeensis str. Arkansas] Length = 125 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ +T+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI PD Sbjct: 1 MTHFITDRCIRCKYTDCVEVCPVDCFYEGANMLVIDPDQCIDCGVCVPECPIDAIVPDDF 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + L+ + +IN +++ +W NIT+ K A K K+ YF Sbjct: 61 IRDVLECNDSALNEEQKNLKKFYEINKKFSKEWNNITSAKPPYSDAESHKYTKNKF-IYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|15604660|ref|NP_221178.1| ferredoxin (fdxA) [Rickettsia prowazekii str. Madrid E] gi|6647508|sp|Q9ZCC8|FER_RICPR RecName: Full=Ferredoxin gi|3861355|emb|CAA15254.1| FERREDOXIN (fdxA) [Rickettsia prowazekii] gi|292572488|gb|ADE30403.1| Ferredoxin [Rickettsia prowazekii Rp22] Length = 109 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 3/106 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P L W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 60 PELIEWVERAKDFIENHGWKNITKKKCALPGADKFKDEKDKFNKYI 105 >gi|229587193|ref|YP_002845694.1| Ferredoxin [Rickettsia africae ESF-5] gi|228022243|gb|ACP53951.1| Ferredoxin [Rickettsia africae ESF-5] Length = 116 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 7/110 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+P ECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPAECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 P++ PGL W++ ++ W NIT KK +LP A K K K+ KY Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKKTALPDADKFKDEKDKFNKYI 109 >gi|51473997|ref|YP_067754.1| ferredoxin [Rickettsia typhi str. Wilmington] gi|81692331|sp|Q68Y04|FER_RICTY RecName: Full=Ferredoxin gi|51460309|gb|AAU04272.1| ferredoxin [Rickettsia typhi str. Wilmington] Length = 110 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 3/109 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY+VT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYIVTDECVKCKYTDCVEVCPVDCFYEGEFMLVINPDECIDCGVCVPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 P L W++ ++ W NIT KK +LP A K + K+ KY N Sbjct: 60 PELIEWVERAKDFIENQGWKNITKKKCALPDADKFKDEQDKFNKYIIKN 108 >gi|52857656|gb|AAU89081.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 64/80 (80%), Positives = 68/80 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNI 80 LE WL +N+EYA WP I Sbjct: 61 QNLEKWLGVNAEYAKTWPTI 80 >gi|294506132|ref|YP_003570190.1| Ferredoxin [Salinibacter ruber M8] gi|294342460|emb|CBH23238.1| Ferredoxin [Salinibacter ruber M8] Length = 141 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/111 (49%), Positives = 65/111 (58%), Gaps = 6/111 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVV E CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI P+ Sbjct: 28 MPYVVAEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPEDQ 87 Query: 60 -EPGLELWLKINSEYATQWP----NITTKKESLPSAAKMDGVKQKYEKYFS 105 E + + N A QW N+T K L A + ++ E + Sbjct: 88 LPEEWEHYTQWNEYLANQWRDLGYNVTEKTGPLDDAEAWEDAEKSEEDILT 138 >gi|88606918|ref|YP_504664.1| ferredoxin [Anaplasma phagocytophilum HZ] gi|88597981|gb|ABD43451.1| ferredoxin [Anaplasma phagocytophilum HZ] Length = 126 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--- 57 MT+ VT+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP DAI Sbjct: 1 MTHFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEF 60 Query: 58 -------------DTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 D + L+ + KIN +++ +W NIT+ + L A + KY+ +F Sbjct: 61 IEDVLASDDSALNDEQKMLKTFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQ-FF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|304309916|ref|YP_003809514.1| Ferrodoxin [gamma proteobacterium HdN1] gi|301795649|emb|CBL43848.1| Ferrodoxin [gamma proteobacterium HdN1] Length = 108 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 M +VV +NCI CK+T C EVCPV+ F+EG NFL I P+ CIDC +C P C +I + D Sbjct: 1 MAHVVLDNCINCKYTYCAEVCPVEAFHEGPNFLVIDPEACIDCMLCVPACITGSIMEERD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 ++ N+ + QWP+I +K + P A + D V K Sbjct: 61 VPHSQRSMVRANAMLSQQWPSIIERKPAFPDAEEWDKVPGK 101 >gi|157804217|ref|YP_001492766.1| ferredoxin [Rickettsia canadensis str. McKiel] gi|157785480|gb|ABV73981.1| Ferredoxin [Rickettsia canadensis str. McKiel] Length = 114 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 3/105 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+DAIKP++ Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGELMLVINPDECIDCGVCIPDCPIDAIKPES- 59 Query: 61 PGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 P L W++ ++ W NIT K+ +L A K K K+ KY Sbjct: 60 PELIEWVERAKDFIENKGWKNITKKRPALTDADKFKDEKDKFNKY 104 >gi|326331682|ref|ZP_08197970.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] gi|325950481|gb|EGD42533.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] Length = 536 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 55/109 (50%), Gaps = 12/109 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTYV+T++C C CVEVCPVDC + G + L IHPDECIDCG CE CPV Sbjct: 1 MTYVITQSC--CNDASCVEVCPVDCIHPGPDEPGFGAAEMLYIHPDECIDCGACEDACPV 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +AI PD ++ IN+ + P AK+ G K Sbjct: 59 NAIFPDYEVPDAFAPYVDINAAFFEFTGEQDEPAPLPPPGAKIPGGPLK 107 >gi|113866665|ref|YP_725154.1| ferredoxin [Ralstonia eutropha H16] gi|113525441|emb|CAJ91786.1| Ferredoxin [Ralstonia eutropha H16] Length = 109 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKY 100 ++ +N+E + + W + K +P + G + Sbjct: 61 LPEDQRHFIALNAELSRRADWLPLLKAKGPIPGHEQWAGHPDRL 104 >gi|73666649|ref|YP_302665.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ehrlichia canis str. Jake] gi|72393790|gb|AAZ68067.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Ehrlichia canis str. Jake] Length = 125 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 59/123 (47%), Positives = 75/123 (60%), Gaps = 17/123 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+ VT+ CI CK+TDCVEVCPVDCFYEG N L I PD+CIDCGVC PECP+DAI PD Sbjct: 1 MTHFVTDKCIRCKYTDCVEVCPVDCFYEGANMLVIDPDQCIDCGVCIPECPIDAIVPDDS 60 Query: 60 ---------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 + ++ +IN +++ +W NIT+ K + P A K K+ KYF Sbjct: 61 IKDILECSDSELNEEQKNIKKSYEINKKFSKEWKNITSAKTAYPEAESYKYRKDKF-KYF 119 Query: 105 SPN 107 N Sbjct: 120 DEN 122 >gi|167720232|ref|ZP_02403468.1| ferredoxin [Burkholderia pseudomallei DM98] gi|167846357|ref|ZP_02471865.1| ferredoxin [Burkholderia pseudomallei B7210] gi|167903326|ref|ZP_02490531.1| ferredoxin [Burkholderia pseudomallei NCTC 13177] Length = 107 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 4/101 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLE 64 E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 2 EGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQR 61 Query: 65 LWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 62 HFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|152982480|ref|YP_001354084.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151282557|gb|ABR90967.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 114 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 3/114 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M Y+VTE CI CK DC+EVCP F+ GENF+ I+PD C++CG+CE CP AIK D Sbjct: 1 MAYIVTEACIRCKFMDCIEVCPTYAFHAGENFVVINPDTCVNCGLCEMVCPTQAIKAKGD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE-KYFSPNPGGK 111 +++++N+ A WP IT K A GV K E ++P+P K Sbjct: 61 ATEKELVFVELNARLAKNWPAITQKGMVPADAGNWIGVSDKKEFLLYTPDPAAK 114 >gi|167816449|ref|ZP_02448129.1| putative ferredoxin [Burkholderia pseudomallei 91] gi|167894938|ref|ZP_02482340.1| putative ferredoxin [Burkholderia pseudomallei 7894] Length = 107 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 63/101 (62%), Gaps = 4/101 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLE 64 E CI CKHTDCV VCPVD F+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 2 EGCIRCKHTDCVAVCPVDRFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQR 61 Query: 65 LWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 62 HFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|73540321|ref|YP_294841.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117734|gb|AAZ59997.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 109 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 4/108 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVT+ CI C+HTDCVEVCP+ CF+EG NFLAI PD+CIDC +C P CPV AI D Sbjct: 1 MTFVVTDACIQCRHTDCVEVCPMSCFHEGPNFLAIDPDQCIDCSMCVPLCPVGAIYSEHD 60 Query: 59 TEPGLELWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKYF 104 ++ IN+E A + W + K L A + Sbjct: 61 LPEDQRHFVAINAELARRPDWLPLRKAKGPLSDHADWADHPDRLSLLI 108 >gi|126436658|ref|YP_001072349.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|126236458|gb|ABN99858.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 548 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPV 52 M YV+T+NC CK CV VCPVDC G L I P+ CIDCG C ECPV Sbjct: 1 MAYVITQNC--CKDASCVPVCPVDCIRPAGEAGQFVGTEMLYIDPETCIDCGACLEECPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWP 78 DAI D E + +IN+ Y + P Sbjct: 59 DAIYYDEDLPADQERFREINASYFQRHP 86 >gi|226939570|ref|YP_002794643.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] gi|226714496|gb|ACO73634.1| 4Fe-4S ferredoxin, iron-sulfur binding [Laribacter hongkongensis HLHK9] Length = 112 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 52/107 (48%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVTE CI CK+TDCVEVCPVDCF EG NFL I P ECIDC +C ECPV AI D Sbjct: 1 MTHVVTEACIRCKYTDCVEVCPVDCFREGPNFLVIDPRECIDCVLCVAECPVGAIYADDD 60 Query: 59 TEPGLELWLKINSEYAT--QWPNITTKKESLPSAAKMDGVKQKYEKY 103 P + ++ +N+E A +W IT + A V K ++ Sbjct: 61 VPPDQQDFIALNAELAAHPEWRPITMARLPPDDADDWARVLDKRQEL 107 >gi|167744446|ref|ZP_02417220.1| putative ferredoxin [Burkholderia pseudomallei 14] Length = 107 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 4/101 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLE 64 E CI CKHTDCV VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ + Sbjct: 2 EGCIRCKHTDCVAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAAAELPDDQR 61 Query: 65 LWLKINSEYATQ--WPNITTKKESLPSAAKMDGVKQKYEKY 103 ++ +N+E A WP I KK +LP A V+ K + Sbjct: 62 PFVALNAELARHPNWPRIIGKKPALPDHAAWADVQGKLAQL 102 >gi|52857660|gb|AAU89083.1| ferredoxin [uncultured Afipia sp.] Length = 81 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 62/79 (78%), Positives = 67/79 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPN 79 LE WL +++EYA WP Sbjct: 61 QNLEKWLGVSAEYAKTWPT 79 >gi|255021029|ref|ZP_05293082.1| ferredoxin, 4Fe-4S [Acidithiobacillus caldus ATCC 51756] gi|254969443|gb|EET26952.1| ferredoxin, 4Fe-4S [Acidithiobacillus caldus ATCC 51756] Length = 107 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVVTE+CI CK+TDCV+VCPVDCF EG NFL I PDECIDC +CEPECP +AI D Sbjct: 1 MTYVVTESCIKCKYTDCVDVCPVDCFREGPNFLVIDPDECIDCTLCEPECPAEAIFRDDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 G E +L+IN+ A WP I KK + A VK K Sbjct: 61 LPEGQEEFLEINARLAKTWPPIIQKKAAPADADDWAKVKDK 101 >gi|254428704|ref|ZP_05042411.1| 4Fe-4S binding domain protein [Alcanivorax sp. DG881] gi|196194873|gb|EDX89832.1| 4Fe-4S binding domain protein [Alcanivorax sp. DG881] Length = 90 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 2/89 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 +EVCPVDCFYEGENFL IHPDECIDC +CEPECPV+AI + E + +L+IN++ A Sbjct: 1 MEVCPVDCFYEGENFLVIHPDECIDCALCEPECPVNAIFSEDELPDDQQDFLEINADLAE 60 Query: 76 QWPNITTKKESLPSAAKMDGVKQKYEKYF 104 +WPNIT K++ A + DGV K EK Sbjct: 61 KWPNITEMKDAPDDAEEWDGVPNKREKLV 89 >gi|52857664|gb|AAU89085.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 62/78 (79%), Positives = 67/78 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWP 78 LE WL +++EYA WP Sbjct: 61 QNLEKWLGVSAEYAKTWP 78 >gi|91983688|gb|ABE68850.1| FdxA [Pseudomonas sp. Q37-87] Length = 92 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 2/90 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEY 73 DCVEVCPVDCFYEG NFL IHPDECIDC +CEPECP +AI + E G+E ++++N+E Sbjct: 1 DCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENFIELNAEL 60 Query: 74 ATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 A WPNIT KK++LP A + DG K Sbjct: 61 ADIWPNITEKKDALPDAEEWDGKTGKIADL 90 >gi|88608216|ref|YP_506219.1| ferredoxin [Neorickettsia sennetsu str. Miyayama] gi|88600385|gb|ABD45853.1| ferredoxin [Neorickettsia sennetsu str. Miyayama] Length = 139 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 63/122 (51%), Gaps = 23/122 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTE C+ CK+TDCVEVCPVDCF+E +L I PD CIDCGVC PECP++AI D Sbjct: 1 MPHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDET 60 Query: 60 ----------------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + L N E A + P I TKK+ L A K V Sbjct: 61 YIDGKSLGEIISVSDASLLTKKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVP 120 Query: 98 QK 99 K Sbjct: 121 NK 122 >gi|226308457|ref|YP_002768417.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226187574|dbj|BAH35678.1| probable ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 560 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEAPFATTEMLYIDPDTCIDCGACVDECPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI PD E +L++N+ Y + P Sbjct: 59 EAIFPDNELDEDDAPYLQMNASYFEKHP 86 >gi|52857658|gb|AAU89082.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 62/78 (79%), Positives = 66/78 (84%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWP 78 LE WL +N+EYA P Sbjct: 61 QNLEKWLGVNAEYAKTXP 78 >gi|254796711|ref|YP_003081547.1| ferredoxin [Neorickettsia risticii str. Illinois] gi|254589951|gb|ACT69313.1| ferredoxin [Neorickettsia risticii str. Illinois] Length = 139 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 62/122 (50%), Gaps = 23/122 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVTE C+ CK+TDCVEVCPVDCF+E +L I PD CIDCGVC PECP++AI D Sbjct: 1 MPHVVTEKCLKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIINDET 60 Query: 60 ----------------------EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + + N E A + P I KK+ L A K V Sbjct: 61 YIDGKSLEEIISVSDTSLLTKKQLDARFMVVFNRERAAELPLIVMKKDPLDGAEKWAEVP 120 Query: 98 QK 99 K Sbjct: 121 NK 122 >gi|52857666|gb|AAU89086.1| ferredoxin [uncultured Afipia sp.] Length = 80 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 62/80 (77%), Positives = 66/80 (82%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPNI 80 LE WL +N+EYA I Sbjct: 61 QNLEKWLGVNAEYAKTXXTI 80 >gi|52857662|gb|AAU89084.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 62/79 (78%), Positives = 66/79 (83%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQWPN 79 LE WL +N+EYA P Sbjct: 61 QNLEKWLGVNAEYAKTGPT 79 >gi|262197809|ref|YP_003269018.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] gi|262081156|gb|ACY17125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] Length = 131 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 63/126 (50%), Gaps = 23/126 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M Y+V + C+ CK+TDCV VCPVDCFYEG+NFL IHPDECIDCG CEPECP AI D Sbjct: 1 MPYIVADPCVKCKYTDCVAVCPVDCFYEGKNFLVIHPDECIDCGACEPECPTTAIFEEGD 60 Query: 59 TEPGLELWLKINSEY---------------------ATQWPNITTKKESLPSAAKMDGVK 97 + IN+ + A WPNIT + L A + Sbjct: 61 LPEKWNAYKTINAVFSGAEEMGDVDTEGWPEQLKASAQVWPNITEQGSPLDGADDAKDEE 120 Query: 98 QKYEKY 103 K Sbjct: 121 NKIAAL 126 >gi|226364584|ref|YP_002782366.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226243073|dbj|BAH53421.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 559 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEKPFATTEMLYIDPDTCIDCGACVEECPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWPNITTKKESL 87 +AI + + E +L IN++Y T+ P E L Sbjct: 59 EAIYAENDLDEVDEPYLDINAQYYTKHPIGPDWPEPL 95 >gi|111017434|ref|YP_700406.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110816964|gb|ABG92248.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 542 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 M YVVT+NC C CV VCPVDC + L I P CIDCG C CPV Sbjct: 1 MAYVVTQNC--CNDATCVAVCPVDCIHPTPAEREYQRTEMLYIDPGACIDCGACADVCPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKE---SLPSAAKMDGVKQ 98 DAI P P ++ + +IN+EY + P LP A V Sbjct: 59 DAIVPGDAPAPDIDRYREINAEYFQRNPRSIAPGAHVQPLPLALATADVAD 109 >gi|111022079|ref|YP_705051.1| ferredoxin--NADP(+) reductase, C-terminal [Rhodococcus jostii RHA1] gi|110821609|gb|ABG96893.1| possible ferredoxin--NADP(+) reductase, C-terminal [Rhodococcus jostii RHA1] Length = 559 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV+VCPV+C + + L I PD CIDCG C ECPV Sbjct: 1 MAYVITQPC--CNDASCVDVCPVNCIHPTPDEKPFATTEMLYIDPDTCIDCGACVEECPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWPNITTKKESL 87 +AI + + E +L IN++Y T+ P E L Sbjct: 59 EAIYAENDLDEVDEPYLDINAQYYTKHPIGPDWPEPL 95 >gi|226304296|ref|YP_002764254.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226183411|dbj|BAH31515.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 563 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 12/89 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTYVVT+ C C CV VCPV+C + + L I P+ CIDCG C CP+ Sbjct: 1 MTYVVTQPC--CNDASCVAVCPVNCIHPTPDESDYARTEMLYIDPNTCIDCGACADACPI 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPN 79 DAI PD+ + G +L+IN++Y N Sbjct: 59 DAIVPDSDLDEGDMPYLEINADYFEDPKN 87 >gi|307069599|ref|YP_003878076.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Zinderia insecticola CARI] gi|306482859|gb|ADM89730.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Zinderia insecticola CARI] Length = 110 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 2/92 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT++VTE+CI CK+TDCVEVCPV+CF+EG NFL I+P+ECIDCGVC ECP AI D Sbjct: 1 MTHIVTESCIECKYTDCVEVCPVNCFHEGPNFLVINPEECIDCGVCVSECPAKAIYLEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 + + KIN E + +WP I K A Sbjct: 61 LPKNQKQFSKINLELSKKWPIINNSKPHKKDA 92 >gi|226361209|ref|YP_002778987.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239694|dbj|BAH50042.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 541 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 M YVVT+NC C CV VCPVDC + L I P CIDCG C CPV Sbjct: 1 MAYVVTQNC--CNDATCVAVCPVDCIHPTPAEREYKRTEMLYIDPGACIDCGACSDVCPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKE---SLPSAAKMDGVKQ 98 DAI P P ++ + IN+EY + P LP A GV Sbjct: 59 DAIVPGDAPVPDIDRYRDINAEYFQRNPRSAAPGAHVQPLPIALATAGVDD 109 >gi|149916919|ref|ZP_01905420.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] gi|149822197|gb|EDM81588.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] Length = 102 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+VVT NC C+ TDCV VCPV+CF+ + L I PDECIDCG C PECPV+AI +TE Sbjct: 1 MTFVVTSNCQRCRFTDCVAVCPVECFHGDKEMLYIDPDECIDCGACVPECPVEAIYDETE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 P W++IN+ A++ P + + LP+A + Sbjct: 61 VPPEQIEWIEINAARASELPVVAETETPLPTAEE 94 >gi|52857654|gb|AAU89080.1| ferredoxin [uncultured Afipia sp.] Length = 79 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 60/76 (78%), Positives = 65/76 (85%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYVVTENCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE Sbjct: 1 MTYVVTENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE 60 Query: 61 PGLELWLKINSEYATQ 76 LE WL +++EYA Sbjct: 61 QNLEKWLGVSAEYAKT 76 >gi|283780774|ref|YP_003371529.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283439227|gb|ADB17669.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 92 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 2/91 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VV + C CK+TDCV VCPV+CFYEGE L IHPDECIDC C PECPV+AI Sbjct: 1 MAHVVCQPCFGCKYTDCVVVCPVECFYEGEQILYIHPDECIDCEACVPECPVEAIFHQDN 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPS 89 + ++++N+E A Q P+IT KKE L Sbjct: 61 VPEDQKPFIELNAEMAPQSPSITEKKEPLAG 91 >gi|83816596|ref|YP_445271.1| ferredoxin-1 [Salinibacter ruber DSM 13855] gi|294507140|ref|YP_003571198.1| Ferredoxin-1 [Salinibacter ruber M8] gi|83757990|gb|ABC46103.1| ferredoxin-1 [Salinibacter ruber DSM 13855] gi|294343468|emb|CBH24246.1| Ferredoxin-1 [Salinibacter ruber M8] Length = 114 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 54/93 (58%), Positives = 61/93 (65%), Gaps = 6/93 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YVVTE CI CK+TDCVEVCPVDCFYEG NFLAI PDECIDC C P CPV+AI PD Sbjct: 1 MPYVVTEPCINCKYTDCVEVCPVDCFYEGPNFLAIQPDECIDCNACVPVCPVEAIYPDDQ 60 Query: 60 -EPGLELWLKINSEYATQWP----NITTKKESL 87 E +++ N + QW N+T K L Sbjct: 61 LPEEYEHYIQWNEYLSNQWRELGYNVTEKTGPL 93 >gi|54027063|ref|YP_121305.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54018571|dbj|BAD59941.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 556 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPVDC + L I PD CIDCG C CPV Sbjct: 1 MAYVITQRC--CNDASCVSECPVDCIRPTPDQPEFATTEMLYIDPDTCIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI + + L + +N+ Y + P Sbjct: 59 EAIFSEDDLTASLARFRDVNAAYFQRHP 86 >gi|111018949|ref|YP_701921.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110818479|gb|ABG93763.1| probable ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 553 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 12/92 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + L I P+ CIDCG C CPV Sbjct: 1 MAYVITQAC--CNDASCVSACPVNCIHPTPEEREFAQTEMLHIDPETCIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITT 82 DAI P+ + L + IN+EY T P T Sbjct: 59 DAIFPEDKLIGSLTRYKDINAEYYTTNPMPTG 90 >gi|117573290|gb|ABK40821.1| ferredoxin [Pseudomonas sp. C10-181] Length = 89 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 2/83 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQ 76 EVCPVDCFYEG NFL IHPDECIDC +CEPECP AI + E G+E ++ +N+E A Sbjct: 1 EVCPVDCFYEGPNFLVIHPDECIDCALCEPECPATAIFSEDEVPAGMENFIVLNAELADI 60 Query: 77 WPNITTKKESLPSAAKMDGVKQK 99 WPNIT KK++LP A + DG + K Sbjct: 61 WPNITEKKDALPDAEEWDGKEGK 83 >gi|325110113|ref|YP_004271181.1| ferredoxin [Planctomyces brasiliensis DSM 5305] gi|324970381|gb|ADY61159.1| ferredoxin [Planctomyces brasiliensis DSM 5305] Length = 92 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VV + C CK+TDCV VCPV+CFYEG+ L IHPDECIDC C PECPV+AI + Sbjct: 1 MPHVVCQPCFNCKYTDCVVVCPVECFYEGDKMLYIHPDECIDCEACVPECPVEAIFHEDN 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPS 89 + +++IN+E + P IT KKE L Sbjct: 61 VPDEWKEYVEINAEKSADTPVITEKKEPLAD 91 >gi|114769350|ref|ZP_01446976.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] gi|114550267|gb|EAU53148.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] Length = 81 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 47/81 (58%), Positives = 54/81 (66%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L IHPDECIDCGVCEPECP DAI PDTEP E W++ N +Y+ WP I ++K LP A Sbjct: 1 MLVIHPDECIDCGVCEPECPADAILPDTEPDTEKWVEFNRKYSEIWPVIISQKTPLPDAE 60 Query: 92 KMDGVKQKYEKYFSPNPGGKN 112 DG + K EKYFS PG Sbjct: 61 VRDGEEGKLEKYFSEKPGEGG 81 >gi|32474247|ref|NP_867241.1| ferredoxin [Rhodopirellula baltica SH 1] gi|32444785|emb|CAD74787.1| ferredoxin [Rhodopirellula baltica SH 1] Length = 91 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 2/89 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--E 60 +VV E C CK+TDCV VCPV+CFYEGE L IHP+ECIDC C PECPV+AI + Sbjct: 2 HVVAEPCSGCKYTDCVVVCPVECFYEGEQMLYIHPEECIDCEACVPECPVEAIFHEDNLP 61 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPS 89 + ++++N+E + + IT KKE L Sbjct: 62 EEWQSYIELNAEMSEKTEVITEKKEPLAD 90 >gi|226361046|ref|YP_002778824.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239531|dbj|BAH49879.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 553 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 12/92 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + L I P+ CIDCG C CPV Sbjct: 1 MAYVITQAC--CNDASCVSACPVNCIHPTPEEREFAQTEMLHIDPETCIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITT 82 DAI P+ + L + IN+EY T P T Sbjct: 59 DAIFPEDKLVGSLARYKDINAEYYTTNPMPTG 90 >gi|262203739|ref|YP_003274947.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262087086|gb|ACY23054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 559 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 17/104 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T C C CV VCPV+C + + L I P+ CIDCG C ECPV Sbjct: 1 MAHVITRPC--CNDASCVAVCPVNCIHPTPDEPEFFTAESLYIDPETCIDCGACIDECPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPN----ITTKKES-LPS 89 +AI PD E E +L+IN++Y + KK LP Sbjct: 59 EAIIPDDSLEERDEPYLQINADYYKDHDVEGGLVPPKKAPQLPD 102 >gi|222102890|ref|YP_002539929.1| ferredoxin [Agrobacterium vitis S4] gi|221739491|gb|ACM40224.1| ferredoxin [Agrobacterium vitis S4] Length = 101 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYVVT+ C C++T+CV VCPV+CF+ E I PD CIDCG C P CPV AI Sbjct: 1 MTYVVTDQCSGCRYTECVTVCPVECFHIDEEMTYIDPDNCIDCGGCAPVCPVGAIHASYL 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 + W++IN A + P + ++ LP A + Sbjct: 61 LPADKQEWIEINRRRAAETPVVASRLPPLPGAEE 94 >gi|111025066|ref|YP_707486.1| ferredoxin [Rhodococcus jostii RHA1] gi|110824045|gb|ABG99328.1| ferredoxin [Rhodococcus jostii RHA1] Length = 128 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ E CI CVE CPVDC YEG L IHPDECIDCG CEP CPV+AI D Sbjct: 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAIYYEAD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E + N+ + + +P A G + S +P Sbjct: 61 LPARWEAFTDDNARFFHSPLPGASAALGMPGGAGKLGRLAADTELVSGHP 110 >gi|86750526|ref|YP_487022.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gi|86573554|gb|ABD08111.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 101 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVVT+NC C++T+CV VCPV+CF+ I P+ CIDCG C P CPV AI PD Sbjct: 1 MTYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYR 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 + W+ +N + A + P +T + LP A Sbjct: 61 LPAHQKFWIDVNRKRAAETPVLTARLPPLPGADD 94 >gi|325675367|ref|ZP_08155051.1| ferredoxin-NADP reductase [Rhodococcus equi ATCC 33707] gi|325553338|gb|EGD23016.1| ferredoxin-NADP reductase [Rhodococcus equi ATCC 33707] Length = 564 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + L I P CIDCG C CPV Sbjct: 1 MAYVITQTC--CNDASCVSACPVNCIHPTPEEAEFATTEMLYIEPQACIDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI P+ + L+ + +IN++Y T+ P Sbjct: 59 NAIFPEDQLSESLQRYREINADYYTRHP 86 >gi|320103065|ref|YP_004178656.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Isosphaera pallida ATCC 43644] gi|319750347|gb|ADV62107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Isosphaera pallida ATCC 43644] Length = 98 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 2/93 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +VVT C CK+TDCV VCPV+CFYEGE L IHPDECIDC C PECPV+AI + Sbjct: 1 MAHVVTAPCFECKYTDCVVVCPVECFYEGEQMLYIHPDECIDCEACVPECPVEAIFHEDN 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAA 91 + ++ +N+E A P IT K + A Sbjct: 61 VPADYKEFIALNAEKAPHLPVITQSKTPMEGPA 93 >gi|269961009|ref|ZP_06175378.1| Ferredoxin [Vibrio harveyi 1DA3] gi|269834228|gb|EEZ88318.1| Ferredoxin [Vibrio harveyi 1DA3] Length = 104 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VVT+NCI CK+TDCV VCP D F+EG NF+ I+P ECIDCG+C EC AI + E Sbjct: 1 MAFVVTDNCIQCKYTDCVAVCPADAFHEGPNFMVINPIECIDCGLCVDECAAAAIFQEDE 60 Query: 61 --PGLELWLKINSEYATQWPNITTKKES 86 ++ ++N+E A WP T K + Sbjct: 61 LPEDQVIYKELNAELAEIWPVQTEVKPA 88 >gi|254514874|ref|ZP_05126935.1| RecA DNA recombination protein [gamma proteobacterium NOR5-3] gi|219677117|gb|EED33482.1| RecA DNA recombination protein [gamma proteobacterium NOR5-3] Length = 90 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 2/85 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 +EVCPVDCFYEG NFL IHPDECIDC +CEPECPVDAI + E +++L++N+E A Sbjct: 1 MEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPVDAIFSEDELPADQQVFLELNAELAE 60 Query: 76 QWPNITTKKESLPSAAKMDGVKQKY 100 WP IT K + A + G K Sbjct: 61 VWPCITEMKPAPEDAEEWAGKPGKL 85 >gi|88856142|ref|ZP_01130803.1| ferredoxin [marine actinobacterium PHSC20C1] gi|88814710|gb|EAR24571.1| ferredoxin [marine actinobacterium PHSC20C1] Length = 111 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDLKDRACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + K N E+ S P A GV K P G + Sbjct: 61 LPDKWADYYKANVEFFDLLEV------SSPGGAAKVGVIHKDHALIVALPEGGGS 109 >gi|118470782|ref|YP_885518.1| ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] gi|118172069|gb|ABK72965.1| putative ferredoxin FdxA [Mycobacterium smegmatis str. MC2 155] Length = 114 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGRPCVDVKDRACVDECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYAT-QWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 L+ + + N+++ T P S AAK+ GV + P + Sbjct: 61 LPEDLQPYQEENAKFFTDVLPGRAQPLGSPGGAAKL-GVVDADTPMVAELPPQGD 114 >gi|120405980|ref|YP_955809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958798|gb|ABM15803.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 559 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 20/123 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPTPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 AI P+T P ++++N+ + + + LP +K+ V + E PGG Sbjct: 59 GAIAPETGLAPDQLPFVELNAAFYPK------RDGKLPPTSKLAPVLEAPE--VRRRPGG 110 Query: 111 KNT 113 T Sbjct: 111 PLT 113 >gi|312140996|ref|YP_004008332.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|311890335|emb|CBH49653.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] Length = 578 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPV+C + L I P CIDCG C CPV Sbjct: 15 MAYVITQTC--CNDASCVSACPVNCIHPTPEEAEFATTEMLYIEPQACIDCGACVDACPV 72 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWP 78 +AI P+ + L+ + +IN++Y T+ P Sbjct: 73 NAIFPEDQLSESLQRYREINADYYTRHP 100 >gi|289555333|ref|ZP_06444543.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 605] gi|289439965|gb|EFD22458.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 605] Length = 550 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNI-----TTKKESLPSAAK 92 AI P+T E +++IN+ Y + P T+K + AA+ Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAE 105 >gi|91774917|ref|YP_544673.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91708904|gb|ABE48832.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 101 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT VVT+NC+ C+ T+CV CPV F G L I + CIDCG C P+CPV AI D Sbjct: 1 MTTVVTDNCLKCRFTECVTSCPVSAFRAGPEMLYIDSETCIDCGACVPKCPVQAIYEDLD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 + W+ IN+ A WP IT K L A Sbjct: 61 LPEDMLQWIDINASEAKLWPKITAKDVPLEGALDRK 96 >gi|167563248|ref|ZP_02356164.1| ferredoxin [Burkholderia oklahomensis EO147] Length = 95 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYAT 75 + VCPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ D ++ +N+E A Sbjct: 1 MAVCPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAADDLPDDQTHFVALNAELAR 60 Query: 76 Q--WPNITTKKESLPSAAKMDGVKQKYEKY 103 WP IT KK +LP A VK K ++ Sbjct: 61 HPSWPRITGKKSALPDHATWTDVKGKLDQL 90 >gi|15828144|ref|NP_302407.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae TN] gi|221230621|ref|YP_002504037.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae Br4923] gi|17432976|sp|O33064|FPRB_MYCLE RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|2440106|emb|CAB16679.1| ferredoxin [Mycobacterium leprae] gi|13093698|emb|CAC31089.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae] gi|219933728|emb|CAR72231.1| ferredoxin, ferredoxin-NADP reductase [Mycobacterium leprae Br4923] Length = 555 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 16/118 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M Y++T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPYIITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 AI DT P +++IN+ Y P LP +K+ V + + P Sbjct: 59 GAIASDTRLAPKQLPFIEINASYYPARPI----DLKLPPTSKLAPVIPAAQVHVRRRP 112 >gi|167461806|ref|ZP_02326895.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 150 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+T CI K DCV VCPVDC +EGE+ I PD CI+CG CE ECPV AI + + Sbjct: 74 MAFVITSPCIGEKAADCVSVCPVDCIHEGEDQYYIDPDVCIECGACEVECPVTAIFHEDD 133 Query: 61 PGLEL--WLKINSEYAT 75 E +++ N + Sbjct: 134 VPDEEKSFIEKNRAFFA 150 >gi|226361233|ref|YP_002779011.1| ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] gi|226239718|dbj|BAH50066.1| putative ferredoxin--NADP(+) reductase [Rhodococcus opacus B4] Length = 561 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 12/101 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV VCPVDC + N L I P CIDCG C CPV Sbjct: 1 MAHVVTQSC--CNDASCVAVCPVDCIHPTPNEPGYGRAEMLYIDPVGCIDCGACIDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAA 91 DAI PD + P + +IN+ Y + E +A Sbjct: 59 DAILPDYDLTPETARYEEINAAYYLNREPLAPAVEPPGAAE 99 >gi|118467681|ref|YP_889914.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium smegmatis str. MC2 155] gi|118168968|gb|ABK69864.1| probable ferredoxin/ferredoxin--NADP reductase [Mycobacterium smegmatis str. MC2 155] Length = 557 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I PD C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPDACVDCGACVSACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PDT EP +++IN+ + + ++ LP +K+ V Sbjct: 59 GAIAPDTRLEPRQLPFVEINAAFYPK------REGKLPPTSKLAPV 98 >gi|328887086|emb|CCA60325.1| Ferredoxin [Streptomyces venezuelae ATCC 10712] Length = 97 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 2/88 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT+ CI CK+TDCV+VCPV CF+EG L I+P+ECIDC C ECP +AI D + Sbjct: 1 MAYVVTDECIGCKYTDCVDVCPVSCFHEGPEMLYINPEECIDCNACVAECPPEAIWADVD 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKES 86 + W++IN E + ++P + + Sbjct: 61 LPEDKLQWIEINGEMSAKYPVLHESRGP 88 >gi|258653795|ref|YP_003202951.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557020|gb|ACV79962.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 114 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ E CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV AI + + Sbjct: 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGARALYIHPDECVDCGACEPVCPVQAIFYEDD 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E + N+ + T ++ + P A G + +P Sbjct: 61 VPNQWEAFTDDNARFFTDTLPGRSQPVASPGGATTIGRLGVDTNLVAAHP 110 >gi|296169651|ref|ZP_06851269.1| ferredoxin--NADP(+) reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895648|gb|EFG75344.1| ferredoxin--NADP(+) reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 563 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWP 78 AI PDT +++IN+ + + P Sbjct: 59 GAIAPDTRLDSKQLPFVEINASFYPERP 86 >gi|119714164|ref|YP_919306.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119526073|gb|ABL79443.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 117 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYVIGQPCVDVMDRGCVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 L +L N+ + ++ + P A G + + P Sbjct: 61 LPGHLTPYLADNALFFSETLEGRSAPVGSPGGASKLGALGADTRLVAGLP 110 >gi|119714883|ref|YP_921848.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119535544|gb|ABL80161.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 544 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--------YEGENFLAIHPDECIDCGVCEPECPV 52 MT+V+T++C C+ CV VCPV C +E L I P CIDCG C CPV Sbjct: 1 MTFVITQSC--CEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWP 78 DAI P P L + +N+EY P Sbjct: 59 DAIYPGDALPPSLSTFSAVNAEYFEARP 86 >gi|317125122|ref|YP_004099234.1| ferredoxin FdxA [Intrasporangium calvum DSM 43043] gi|315589210|gb|ADU48507.1| putative ferredoxin FdxA [Intrasporangium calvum DSM 43043] Length = 118 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 3/94 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ CI K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGSPCIDVKDRACVEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWP-NITTKKESLPSAA 91 P LE +L+ N+++ + S AA Sbjct: 61 LPPDLEPYLQDNADFFEETMAGQAEPLGSPGGAA 94 >gi|183982094|ref|YP_001850385.1| ferredoxin FdxA_1 [Mycobacterium marinum M] gi|183175420|gb|ACC40530.1| ferredoxin FdxA_1 [Mycobacterium marinum M] Length = 115 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNPGGKNT 113 EL + A + + L P A G + +P + Sbjct: 61 LPQELHPHLADNVAFFTETLPGRDGPLGSPGGAAKIGRLGVDTPLVAGHPQAADA 115 >gi|314922814|gb|EFS86645.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL001PA1] Length = 135 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 31 TYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDDL 90 Query: 60 EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 91 PGDQEKFLDINAEFFNE 107 >gi|300692275|ref|YP_003753270.1| ferredoxin II (FdII) [Ralstonia solanacearum PSI07] gi|299079335|emb|CBJ52007.1| Ferredoxin II (FdII) [Ralstonia solanacearum PSI07] Length = 103 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 48/100 (48%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYVVT+ C C++T+CV VCPV CF+ + I PD CIDCG C P CPV AI D Sbjct: 1 MTYVVTDLCTGCRYTECVTVCPVACFHLDDQMTYIDPDNCIDCGGCAPACPVGAIVADYL 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 WL IN E A Q P IT+K LP A + K Sbjct: 61 LPADKAAWLGINRERAAQTPVITSKLPPLPGAPDLPEHKD 100 >gi|226359497|ref|YP_002777274.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226237981|dbj|BAH48329.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 128 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ E CI CVE CPVDC YEG L IHPDECIDCG CEP CPV+AI + + Sbjct: 1 MTYVIAEPCIDVLDRACVEECPVDCIYEGGRSLYIHPDECIDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + N+ + + +P A G + S P Sbjct: 61 LPARWVAFTDDNARFFHSPLPGASAALGMPGGAGKLGPLAADTELVSGYPPSGPA 115 >gi|34581123|ref|ZP_00142603.1| ferredoxin [Rickettsia sibirica 246] gi|28262508|gb|EAA26012.1| ferredoxin [Rickettsia sibirica 246] Length = 127 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+P+ECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPNECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKK 84 P++ PGL W++ ++ W NIT KK Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKK 89 >gi|311111810|ref|YP_003983032.1| ferredoxin [Rothia dentocariosa ATCC 17931] gi|310943304|gb|ADP39598.1| ferredoxin [Rothia dentocariosa ATCC 17931] Length = 160 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 10/113 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 55 MTYVIALPCVDVKDRACVEECPVDCIYEGDRTLYIHPDECVDCGACEPVCPVEAIYYEDD 114 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 ++ N+E+ S AAKM G K + + P Sbjct: 115 VPEEWSEYITANAEFFDDL-------GSPGGAAKM-GPTGKDVPFIAALPPQG 159 >gi|119961114|ref|YP_948508.1| ferredoxin [Arthrobacter aurescens TC1] gi|119947973|gb|ABM06884.1| ferredoxin [Arthrobacter aurescens TC1] Length = 132 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 10/109 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 TYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI DT Sbjct: 26 TYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDDT 85 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ S AAK+ G K Y + P Sbjct: 86 PEEWADYYKANVEFFDDL-------GSPGGAAKI-GNTGKDHPYIAALP 126 >gi|54024557|ref|YP_118799.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54016065|dbj|BAD57435.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 554 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 12/91 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C C CV CPVDC L I P+ CIDCG C CPV Sbjct: 1 MAYVITQRC--CNDASCVAECPVDCIRPRPEDPEFTSAEMLYIDPETCIDCGACFEACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNIT 81 A+ + E +L + +IN+++ + P T Sbjct: 59 GAVYAEDELPAQLDRYREINADWFARHPMTT 89 >gi|317509391|ref|ZP_07967010.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252314|gb|EFV11765.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 548 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 28/113 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDGSCVFACPVNCIHPTPDEPDFLTAEMLHIDPAACVDCGACVDACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYA-----TQW-----------PNITTKKESL 87 +AI PDT+ P +L++N+ Y +W P+I ++ L Sbjct: 59 EAIVPDTKLAPKQLPFLELNASYFPKGGRKKWYSPMLAPIPEAPHIKARRAPL 111 >gi|296122862|ref|YP_003630640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296015202|gb|ADG68441.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 94 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 2/90 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VV E C CK+TDCV VCPV+CF EGE+ L IHP+ECIDC C PECP AI + Sbjct: 1 MTHVVAEPCFNCKYTDCVVVCPVECFKEGESMLFIHPEECIDCEACVPECPPQAIFHEDN 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLP 88 +LK+N+E + Q P IT KKE L Sbjct: 61 LPAQWADYLKLNAEMSEQCPPITEKKEPLG 90 >gi|117927707|ref|YP_872258.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648170|gb|ABK52272.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 117 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCIDVMDRACVEECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYA-TQWPNITTKKESLPSAAK 92 ++ + N+ + P S A+K Sbjct: 61 LPEQWTVYREDNAAFFHETLPGRDAPLGSPGGASK 95 >gi|306792261|ref|ZP_07430563.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu005] gi|308339184|gb|EFP28035.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu005] Length = 575 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNI-----TTKKESLPSAAK 92 AI P+T E +++IN+ Y + P T+K + AA+ Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAE 105 >gi|15608026|ref|NP_215401.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium tuberculosis H37Rv] gi|15840300|ref|NP_335337.1| ferredoxin/ferredoxin--NADP reductase, putative [Mycobacterium tuberculosis CDC1551] gi|31792074|ref|NP_854567.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium bovis AF2122/97] gi|121636809|ref|YP_977032.1| putative NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660663|ref|YP_001282186.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium tuberculosis H37Ra] gi|148822094|ref|YP_001286848.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis F11] gi|167968347|ref|ZP_02550624.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis H37Ra] gi|215402685|ref|ZP_03414866.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|215410472|ref|ZP_03419280.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|215426152|ref|ZP_03424071.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|215429743|ref|ZP_03427662.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|218752551|ref|ZP_03531347.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|219556751|ref|ZP_03535827.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|224989280|ref|YP_002643967.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800092|ref|YP_003033093.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 1435] gi|254231194|ref|ZP_04924521.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis C] gi|254363817|ref|ZP_04979863.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis str. Haarlem] gi|254549863|ref|ZP_05140310.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185781|ref|ZP_05763255.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|260199906|ref|ZP_05767397.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|260204088|ref|ZP_05771579.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289442296|ref|ZP_06432040.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|289446451|ref|ZP_06436195.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|289568850|ref|ZP_06449077.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|289573512|ref|ZP_06453739.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289744616|ref|ZP_06503994.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|289749408|ref|ZP_06508786.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|289752941|ref|ZP_06512319.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|289761017|ref|ZP_06520395.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|294996366|ref|ZP_06802057.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 210] gi|297633403|ref|ZP_06951183.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 4207] gi|297730388|ref|ZP_06959506.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN R506] gi|298524378|ref|ZP_07011787.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|313657715|ref|ZP_07814595.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN V2475] gi|54037133|sp|P65528|FPRB_MYCTU RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|54037134|sp|P65529|FPRB_MYCBO RecName: Full=Probable ferredoxin/ferredoxin--NADP reductase; Short=FNR gi|1314025|emb|CAA97393.1| PROBABLE NADPH:ADRENODOXIN OXIDOREDUCTASE FPRB (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE) [Mycobacterium tuberculosis H37Rv] gi|13880462|gb|AAK45151.1| ferredoxin/ferredoxin--NADP reductase, putative [Mycobacterium tuberculosis CDC1551] gi|31617661|emb|CAD93771.1| PROBABLE NADPH:ADRENODOXIN OXIDOREDUCTASE FPRB (ADRENODOXIN REDUCTASE) (AR) (FERREDOXIN-NADP(+) REDUCTASE) [Mycobacterium bovis AF2122/97] gi|121492456|emb|CAL70924.1| Probable nadph:adrenodoxin oxidoreductase fprB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600253|gb|EAY59263.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis C] gi|134149331|gb|EBA41376.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis str. Haarlem] gi|148504815|gb|ABQ72624.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium tuberculosis H37Ra] gi|148720621|gb|ABR05246.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis F11] gi|224772393|dbj|BAH25199.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321595|gb|ACT26198.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 1435] gi|289415215|gb|EFD12455.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T46] gi|289419409|gb|EFD16610.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CPHL_A] gi|289537943|gb|EFD42521.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis K85] gi|289542604|gb|EFD46252.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T17] gi|289685144|gb|EFD52632.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 02_1987] gi|289689995|gb|EFD57424.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T92] gi|289693528|gb|EFD60957.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis EAS054] gi|289708523|gb|EFD72539.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis GM 1503] gi|298494172|gb|EFI29466.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis 94_M4241A] gi|323720595|gb|EGB29673.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis CDC1551A] gi|326904895|gb|EGE51828.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis W-148] gi|328459830|gb|AEB05253.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis KZN 4207] Length = 575 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNI-----TTKKESLPSAAK 92 AI P+T E +++IN+ Y + P T+K + AA+ Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAE 105 >gi|148822393|ref|YP_001287147.1| ferredoxin fdxC [Mycobacterium tuberculosis F11] gi|289744922|ref|ZP_06504300.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|148720920|gb|ABR05545.1| ferredoxin fdxC [Mycobacterium tuberculosis F11] gi|289685450|gb|EFD52938.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|323720340|gb|EGB29436.1| ferredoxin fdxC [Mycobacterium tuberculosis CDC1551A] Length = 126 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 20 TYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDV 79 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + +IN+++ + S AAK+ + + P ++ Sbjct: 80 PEQWSHYTQINADFFAEL-------GSPGGAAKVGMTENDPQAVKDLAPQSEDA 126 >gi|167570432|ref|ZP_02363306.1| ferredoxin [Burkholderia oklahomensis C6786] Length = 93 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 4/87 (4%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYATQ-- 76 CPVDCF+EG NFL I PDECIDC +CEPECP+DAI+ D ++ +N+E A Sbjct: 2 CPVDCFHEGPNFLVIDPDECIDCALCEPECPIDAIRAADDLPDDQTHFVALNAELARHPS 61 Query: 77 WPNITTKKESLPSAAKMDGVKQKYEKY 103 WP IT KK +LP A VK K ++ Sbjct: 62 WPRITGKKSALPDHATWTDVKGKLDQL 88 >gi|313763939|gb|EFS35303.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL013PA1] gi|313771530|gb|EFS37496.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL074PA1] gi|313808190|gb|EFS46664.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA2] gi|313811344|gb|EFS49058.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL083PA1] gi|313812527|gb|EFS50241.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL025PA1] gi|313814934|gb|EFS52648.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL059PA1] gi|313818956|gb|EFS56670.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL046PA2] gi|313820786|gb|EFS58500.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL036PA1] gi|313822450|gb|EFS60164.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL036PA2] gi|313825755|gb|EFS63469.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL063PA1] gi|313830903|gb|EFS68617.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL007PA1] gi|313833330|gb|EFS71044.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL056PA1] gi|314914976|gb|EFS78807.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA4] gi|314918703|gb|EFS82534.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA1] gi|314920506|gb|EFS84337.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA3] gi|314932180|gb|EFS96011.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL067PA1] gi|314954553|gb|EFS98959.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL027PA1] gi|314958650|gb|EFT02752.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA1] gi|314959746|gb|EFT03848.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA2] gi|314968248|gb|EFT12347.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA1] gi|314973790|gb|EFT17886.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL053PA1] gi|314976441|gb|EFT20536.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL045PA1] gi|314979128|gb|EFT23222.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL072PA2] gi|314983280|gb|EFT27372.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA1] gi|314986685|gb|EFT30777.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA2] gi|314989427|gb|EFT33518.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL005PA3] gi|315080151|gb|EFT52127.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL078PA1] gi|315084033|gb|EFT56009.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL027PA2] gi|315085234|gb|EFT57210.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL002PA3] gi|315089149|gb|EFT61125.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL072PA1] gi|315096565|gb|EFT68541.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL038PA1] gi|315098973|gb|EFT70949.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL059PA2] gi|315100787|gb|EFT72763.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL046PA1] gi|315107273|gb|EFT79249.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL030PA1] gi|315108004|gb|EFT79980.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL030PA2] gi|327326814|gb|EGE68597.1| ferredoxin [Propionibacterium acnes HL096PA2] gi|327330489|gb|EGE72236.1| ferredoxin [Propionibacterium acnes HL096PA3] gi|327442984|gb|EGE89638.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL043PA1] gi|327445106|gb|EGE91760.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL043PA2] gi|327446920|gb|EGE93574.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL013PA2] gi|327450087|gb|EGE96741.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA3] gi|327455358|gb|EGF02013.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL083PA2] gi|328752501|gb|EGF66117.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL020PA1] gi|328752753|gb|EGF66369.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL087PA1] gi|328759326|gb|EGF72942.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL025PA2] gi|328760188|gb|EGF73761.1| ferredoxin [Propionibacterium acnes HL099PA1] Length = 135 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 31 TYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDDL 90 Query: 60 EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 91 PGDQEKFLDINAEFFNE 107 >gi|314966245|gb|EFT10344.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL082PA2] gi|314980771|gb|EFT24865.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA3] gi|315090258|gb|EFT62234.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA4] gi|315093409|gb|EFT65385.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL060PA1] gi|315102964|gb|EFT74940.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL050PA2] gi|327327026|gb|EGE68807.1| ferredoxin [Propionibacterium acnes HL103PA1] gi|327331132|gb|EGE72872.1| ferredoxin [Propionibacterium acnes HL097PA1] Length = 135 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 31 TYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDDL 90 Query: 60 EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 91 PGDQEKFLDINAEFFNE 107 >gi|215410806|ref|ZP_03419614.1| ferredoxin fdxC [Mycobacterium tuberculosis 94_M4241A] gi|298524675|ref|ZP_07012084.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494469|gb|EFI29763.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 108 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 9/115 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + +IN+++ + S AAK+ + + P +N Sbjct: 61 VPEQWSHYTQINADFFAEL-------GSPGGAAKVGMTENDPQAVKDLAPQSENA 108 >gi|126437410|ref|YP_001073101.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|126237210|gb|ABO00611.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 561 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFATAEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWP-----NITTKKESLPSAAKMDGVKQ 98 AI P+ ++++N+ + P T+K +P A + Sbjct: 59 GAIAPEATLTDSQLPFVELNAAFYPPRPPDEKVPPTSKLAPVPDAPVVRSRPD 111 >gi|108801425|ref|YP_641622.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119870578|ref|YP_940530.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|108771844|gb|ABG10566.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119696667|gb|ABL93740.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] Length = 561 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFATAEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWP-----NITTKKESLPSAAKMDGVKQ 98 AI P+ ++++N+ + P T+K +P A + Sbjct: 59 GAIAPEATLTDSQLPFVELNAAFYPPRPPDEKVPPTSKLAPVPDAPVVRSRPD 111 >gi|15608317|ref|NP_215693.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Rv] gi|15840620|ref|NP_335657.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31792371|ref|NP_854864.1| ferredoxin FdxC [Mycobacterium bovis AF2122/97] gi|121637109|ref|YP_977332.1| putative ferredoxin fdxC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660965|ref|YP_001282488.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Ra] gi|167966778|ref|ZP_02549055.1| ferredoxin fdxC [Mycobacterium tuberculosis H37Ra] gi|215403016|ref|ZP_03415197.1| ferredoxin fdxC [Mycobacterium tuberculosis 02_1987] gi|215430060|ref|ZP_03427979.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|215445354|ref|ZP_03432106.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|218752871|ref|ZP_03531667.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|219557068|ref|ZP_03536144.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|224989582|ref|YP_002644269.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253799779|ref|YP_003032780.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 1435] gi|254231445|ref|ZP_04924772.1| ferredoxin fdxC [Mycobacterium tuberculosis C] gi|254364080|ref|ZP_04980126.1| ferredoxin fdxC [Mycobacterium tuberculosis str. Haarlem] gi|254550183|ref|ZP_05140630.1| ferredoxin fdxC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186110|ref|ZP_05763584.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|260200225|ref|ZP_05767716.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|260204430|ref|ZP_05771921.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289442611|ref|ZP_06432355.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|289446767|ref|ZP_06436511.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|289555034|ref|ZP_06444244.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 605] gi|289569181|ref|ZP_06449408.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|289573837|ref|ZP_06454064.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289749720|ref|ZP_06509098.1| LOW QUALITY PROTEIN: ferredoxin fdxC [Mycobacterium tuberculosis T92] gi|289753247|ref|ZP_06512625.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|289757273|ref|ZP_06516651.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|289761323|ref|ZP_06520701.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|294993365|ref|ZP_06799056.1| ferredoxin fdxC [Mycobacterium tuberculosis 210] gi|297633725|ref|ZP_06951505.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 4207] gi|297730711|ref|ZP_06959829.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN R506] gi|306775348|ref|ZP_07413685.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu001] gi|306781745|ref|ZP_07420082.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu002] gi|306783896|ref|ZP_07422218.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu003] gi|306788262|ref|ZP_07426584.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu004] gi|306792587|ref|ZP_07430889.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu005] gi|306796993|ref|ZP_07435295.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu006] gi|306802871|ref|ZP_07439539.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu008] gi|306807053|ref|ZP_07443721.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu007] gi|306967258|ref|ZP_07479919.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu009] gi|306971442|ref|ZP_07484103.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu010] gi|307079169|ref|ZP_07488339.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu011] gi|307083730|ref|ZP_07492843.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu012] gi|313658042|ref|ZP_07814922.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN V2475] gi|2695961|emb|CAA15854.1| PROBABLE FERREDOXIN FDXC [Mycobacterium tuberculosis H37Rv] gi|13880802|gb|AAK45471.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31617959|emb|CAD94071.1| PROBABLE FERREDOXIN FDXC [Mycobacterium bovis AF2122/97] gi|121492756|emb|CAL71227.1| Probable ferredoxin fdxC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600504|gb|EAY59514.1| ferredoxin fdxC [Mycobacterium tuberculosis C] gi|134149594|gb|EBA41639.1| ferredoxin fdxC [Mycobacterium tuberculosis str. Haarlem] gi|148505117|gb|ABQ72926.1| ferredoxin FdxC [Mycobacterium tuberculosis H37Ra] gi|224772695|dbj|BAH25501.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253321282|gb|ACT25885.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 1435] gi|289415530|gb|EFD12770.1| ferredoxin fdxC [Mycobacterium tuberculosis T46] gi|289419725|gb|EFD16926.1| ferredoxin fdxC [Mycobacterium tuberculosis CPHL_A] gi|289439666|gb|EFD22159.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 605] gi|289538268|gb|EFD42846.1| ferredoxin fdxC [Mycobacterium tuberculosis K85] gi|289542935|gb|EFD46583.1| ferredoxin fdxC [Mycobacterium tuberculosis T17] gi|289690307|gb|EFD57736.1| LOW QUALITY PROTEIN: ferredoxin fdxC [Mycobacterium tuberculosis T92] gi|289693834|gb|EFD61263.1| ferredoxin fdxC [Mycobacterium tuberculosis EAS054] gi|289708829|gb|EFD72845.1| ferredoxin fdxC [Mycobacterium tuberculosis GM 1503] gi|289712837|gb|EFD76849.1| ferredoxin fdxC [Mycobacterium tuberculosis T85] gi|308216149|gb|EFO75548.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu001] gi|308325500|gb|EFP14351.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu002] gi|308331334|gb|EFP20185.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu003] gi|308335151|gb|EFP24002.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu004] gi|308338958|gb|EFP27809.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu005] gi|308342625|gb|EFP31476.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu006] gi|308346514|gb|EFP35365.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu007] gi|308350434|gb|EFP39285.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu008] gi|308355081|gb|EFP43932.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu009] gi|308359036|gb|EFP47887.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu010] gi|308362963|gb|EFP51814.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu011] gi|308366614|gb|EFP55465.1| ferredoxin fdxC [Mycobacterium tuberculosis SUMu012] gi|326902801|gb|EGE49734.1| ferredoxin fdxC [Mycobacterium tuberculosis W-148] gi|328459524|gb|AEB04947.1| ferredoxin fdxC [Mycobacterium tuberculosis KZN 4207] Length = 108 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 9/115 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + +IN+++ + S AAK+ + + P ++ Sbjct: 61 VPEQWSHYTQINADFFAEL-------GSPGGAAKVGMTENDPQAVKDLAPQSEDA 108 >gi|296270986|ref|YP_003653618.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermobispora bispora DSM 43833] gi|296093773|gb|ADG89725.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobispora bispora DSM 43833] Length = 108 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 10/114 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACVEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + K N E+ P A G K + P Sbjct: 61 LPEQWKDFYKANVEFFDDL--------GSPGGASKLGKINKDHPIVAALPPQGG 106 >gi|269125402|ref|YP_003298772.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310360|gb|ACY96734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomonospora curvata DSM 43183] Length = 107 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGKRQLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + K+N+E+ P A G K Y + P Sbjct: 61 IPDQWKDFYKVNAEFFDDL--------GSPGGASKVGKIDKDHPYVAALP 102 >gi|294631226|ref|ZP_06709786.1| ferredoxin [Streptomyces sp. e14] gi|292834559|gb|EFF92908.1| ferredoxin [Streptomyces sp. e14] Length = 143 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 39 TYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDDV 98 Query: 60 EPGLELWLKINSEYATQ 76 + + K N E+ + Sbjct: 99 PEEWKDYYKANVEFFDE 115 >gi|118616138|ref|YP_904470.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium ulcerans Agy99] gi|118568248|gb|ABL02999.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium ulcerans Agy99] Length = 561 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 16/106 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVTCVDCGACVSACPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PD+ +++IN+ Y Q E LP +K+ V Sbjct: 59 GAIAPDSRLDSKQLPFVEINASYYPQR----QGGEKLPPTSKLAPV 100 >gi|284989663|ref|YP_003408217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062908|gb|ADB73846.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 108 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 10/113 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+T+ C+ C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVITQACVDVLDKACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + + N E+ + P A G K + P Sbjct: 61 VPDKWKDFYNANVEFFSDL--------GSPGGAAKTGKIGKDHPLVAALPPQG 105 >gi|41406923|ref|NP_959759.1| FprB [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395273|gb|AAS03142.1| FprB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 566 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PD + +++IN+ + + P + LP +K+ V Sbjct: 59 GAIAPDNRLDDKQLPFVEINASFYPKRP----AGQKLPPTSKLAPV 100 >gi|313791594|gb|EFS39712.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL110PA1] Length = 144 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 40 TYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDDL 99 Query: 60 EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 100 PGDQEKFLDINAEFFNE 116 >gi|207743547|ref|YP_002259939.1| ferredoxin protein [Ralstonia solanacearum IPO1609] gi|206594945|emb|CAQ61872.1| ferredoxin protein [Ralstonia solanacearum IPO1609] Length = 91 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 3/87 (3%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC ECPV+AI D + W+ IN+E A Sbjct: 1 MDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINAELAQ 60 Query: 76 Q-WPNITTKKESLPSAAKMDGVKQKYE 101 WP+IT K LP A + VK K + Sbjct: 61 AGWPSITKTKSPLPEADQWKDVKDKEQ 87 >gi|50842114|ref|YP_055341.1| ferredoxin [Propionibacterium acnes KPA171202] gi|289425779|ref|ZP_06427533.1| putative ferredoxin [Propionibacterium acnes SK187] gi|289426708|ref|ZP_06428436.1| putative ferredoxin [Propionibacterium acnes J165] gi|295130202|ref|YP_003580865.1| ferredoxin family protein [Propionibacterium acnes SK137] gi|50839716|gb|AAT82383.1| ferredoxin [Propionibacterium acnes KPA171202] gi|289153722|gb|EFD02429.1| putative ferredoxin [Propionibacterium acnes SK187] gi|289160034|gb|EFD08210.1| putative ferredoxin [Propionibacterium acnes J165] gi|291377123|gb|ADE00978.1| ferredoxin family protein [Propionibacterium acnes SK137] gi|313802321|gb|EFS43547.1| putative ferredoxin [Propionibacterium acnes HL110PA2] gi|313828097|gb|EFS65811.1| putative ferredoxin [Propionibacterium acnes HL063PA2] gi|313839087|gb|EFS76801.1| putative ferredoxin [Propionibacterium acnes HL086PA1] gi|314962320|gb|EFT06421.1| putative ferredoxin [Propionibacterium acnes HL082PA1] gi|315077406|gb|EFT49466.1| putative ferredoxin [Propionibacterium acnes HL053PA2] gi|327455186|gb|EGF01841.1| putative ferredoxin [Propionibacterium acnes HL092PA1] gi|332675037|gb|AEE71853.1| ferredoxin [Propionibacterium acnes 266] Length = 106 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNE 78 >gi|296170897|ref|ZP_06852434.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894446|gb|EFG74190.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 118 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + CI CV+ CPVDC YEG L IHPDEC+DCG CEP CPVDAI + + Sbjct: 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVDAIYYEDD 60 Query: 61 PGLE--LWLKINSE-YATQWPNITTKKESLPSAAKM 93 E +L N+ +A P S AAKM Sbjct: 61 LPDELNPYLADNAAFFAETLPGRDAPLGSPGGAAKM 96 >gi|256397063|ref|YP_003118627.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256363289|gb|ACU76786.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Catenulispora acidiphila DSM 44928] Length = 109 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 59/110 (53%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + K N E+ S A+KM G+ +K S P Sbjct: 61 TPEQWKDYYKANVEFFDDL-------GSPGGASKM-GLIEKDHPLVSVLP 102 >gi|120405481|ref|YP_955310.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958299|gb|ABM15304.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 107 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S A+K+ + P G++ Sbjct: 61 VPDQWSAYTQINADFFVEL-------GSPGGASKVGQTDNDPQAVKDLPPQGED 107 >gi|315606086|ref|ZP_07881117.1| ferredoxin [Actinomyces sp. oral taxon 180 str. F0310] gi|315312368|gb|EFU60454.1| ferredoxin [Actinomyces sp. oral taxon 180 str. F0310] Length = 113 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L IHP+EC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERTLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 +L+ N+++ Q P A+ GV+ + + P Sbjct: 61 LPDEWSDYLRANADFFNQL--------GSPGGAQKTGVQDYDDPMIAELP 102 >gi|269793446|ref|YP_003312901.1| ferredoxin [Sanguibacter keddieii DSM 10542] gi|269095631|gb|ACZ20067.1| ferredoxin [Sanguibacter keddieii DSM 10542] Length = 108 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 10/114 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + K N E+ S AAKM G K P G N Sbjct: 61 VPDEWSEYYKANVEFFDDL-------GSPGGAAKM-GEIDKDHAVILALPAGIN 106 >gi|299067165|emb|CBJ38361.1| Ferredoxin (fdxA) [Ralstonia solanacearum CMR15] Length = 91 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 3/87 (3%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC ECPV+AI D + W+ IN++ A Sbjct: 1 MDVCPVDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINADLAQ 60 Query: 76 Q-WPNITTKKESLPSAAKMDGVKQKYE 101 WP+IT K LP A + VK K + Sbjct: 61 AGWPSITKTKTPLPDAEEWKDVKDKEQ 87 >gi|282854408|ref|ZP_06263745.1| putative ferredoxin [Propionibacterium acnes J139] gi|282583861|gb|EFB89241.1| putative ferredoxin [Propionibacterium acnes J139] gi|328906846|gb|EGG26612.1| putative ferredoxin [Propionibacterium sp. P08] Length = 106 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNE 78 >gi|319949121|ref|ZP_08023214.1| putative ferredoxin reductase [Dietzia cinnamea P4] gi|319437231|gb|EFV92258.1| putative ferredoxin reductase [Dietzia cinnamea P4] Length = 551 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T+ C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQAC--CADASCVHACPVNCIHPTPDEPDFATAEMLYIDPVSCVDCGACVGACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEY 73 AI P TE P +L+IN+E Sbjct: 59 GAIVPHTELAPEQHDFLQINAEL 81 >gi|238650840|ref|YP_002916695.1| ferredoxin [Rickettsia peacockii str. Rustic] gi|238624938|gb|ACR47644.1| ferredoxin [Rickettsia peacockii str. Rustic] Length = 108 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 7/90 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 MTYVVT+ C+ CK+TDCVEVCPVDCFYEGE L I+PDECIDCGVC P+CP+ AIK Sbjct: 1 MTYVVTDECVKCKYTDCVEVCPVDCFYEGEREDDFMLVINPDECIDCGVCVPDCPIGAIK 60 Query: 57 PDTEPGLELWLKINSEYATQ--WPNITTKK 84 P++ PGL W++ ++ W NIT KK Sbjct: 61 PES-PGLIEWVERAKDFIENKGWKNITKKK 89 >gi|254455104|ref|ZP_05068540.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] gi|198263806|gb|EDY88077.1| 4Fe-4S ferredoxin, iron-sulfur binding [Octadecabacter antarcticus 238] Length = 78 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 45/77 (58%), Positives = 59/77 (76%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L IHPDECIDCGVCEPECP DAI DT+ G E WL++NS++A +WPNI + E+L +A Sbjct: 1 MLVIHPDECIDCGVCEPECPADAILADTDQGAETWLELNSKFAAKWPNIIQQSEALANAE 60 Query: 92 KMDGVKQKYEKYFSPNP 108 + DG++ K++KYFS P Sbjct: 61 EYDGMENKFDKYFSSKP 77 >gi|313836966|gb|EFS74680.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA2] gi|314929443|gb|EFS93274.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL044PA1] gi|314971472|gb|EFT15570.1| 4Fe-4S binding domain protein [Propionibacterium acnes HL037PA3] Length = 135 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+AI + Sbjct: 31 TYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAIYYEDDL 90 Query: 60 EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 91 PGDQEKFLDINAEFFNE 107 >gi|315443225|ref|YP_004076104.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315261528|gb|ADT98269.1| ferredoxin [Mycobacterium sp. Spyr1] Length = 107 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S A+K+ + P G++ Sbjct: 61 VPDQWSSYTQINADFFAEL-------GSPGGASKVGQTDNDPQAVKDLPPQGED 107 >gi|302536699|ref|ZP_07289041.1| ferredoxin [Streptomyces sp. C] gi|302445594|gb|EFL17410.1| ferredoxin [Streptomyces sp. C] Length = 110 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 T + + K N E+ + P A G+ ++ + + P N Sbjct: 61 TPEEWKDYYKANVEFFDEL--------GSPGGASKLGLIERDHPFVAALPADINA 107 >gi|72160895|ref|YP_288552.1| ferredoxin [Thermobifida fusca YX] gi|71914627|gb|AAZ54529.1| ferredoxin [Thermobifida fusca YX] Length = 106 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + K+N E+ + P A G + + P Sbjct: 61 LPSEWSDFYKVNVEFFEEL--------GSPGGASKVGKIDRDHPLVAALPPQG 105 >gi|145222758|ref|YP_001133436.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145215244|gb|ABP44648.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 107 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ T+ S A+K+ + P G++ Sbjct: 61 VPEQWSAYTQINADFFTEL-------GSPGGASKVGQTDNDPQAVKDLPPQGED 107 >gi|183984613|ref|YP_001852904.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium marinum M] gi|183177939|gb|ACC43049.1| NADPH:adrenodoxin oxidoreductase FprB [Mycobacterium marinum M] Length = 561 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 16/106 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDGSCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PD+ +++IN+ Y Q E LP +K+ V Sbjct: 59 GAIAPDSRLDSKQLPFVEINASYYPQR----QGGEKLPPTSKLAPV 100 >gi|117929063|ref|YP_873614.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidothermus cellulolyticus 11B] gi|117649526|gb|ABK53628.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 108 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ + C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAQPCVDVKDRACVDECPVDCIYEGQRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + + K+N E+ P A GV + P Sbjct: 61 LPDQWKDYYKVNVEFFEDL--------GSPGGASKVGVIDHDHPIVAALPPQGEA 107 >gi|326329869|ref|ZP_08196186.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] gi|325952336|gb|EGD44359.1| ferredoxin--NADP reductase [Nocardioidaceae bacterium Broad-1] Length = 560 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + L + C+DCG C CP Sbjct: 1 MPHVVTQSC--CADASCVVACPVNCIHPAPGEPGFGEAEMLYVDAKSCVDCGACVTACPA 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKESL 87 DAI P T G + +L IN+EY +P+ +L Sbjct: 59 DAIVPHTTLSEGQKPFLAINAEYFEVFPHKDRTPLAL 95 >gi|240170645|ref|ZP_04749304.1| ferredoxin FdxA_1 [Mycobacterium kansasii ATCC 12478] Length = 118 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 57/116 (49%), Gaps = 4/116 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + CI CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGKPCIDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYA-TQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 LE + N+ + P S AAK+ G + P ++ Sbjct: 61 LPAELEPYRADNAAFFTETLPGRDEPLGSPGGAAKI-GPLGVDTPLVAAEPRADDS 115 >gi|331697009|ref|YP_004333248.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326951698|gb|AEA25395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 120 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ-WPNITTKKESLPSAAK 92 L+ N+ + T P S AAK Sbjct: 61 LPDRWAAHLEDNAAFFTTALPGRAAPLGSPGGAAK 95 >gi|184200470|ref|YP_001854677.1| ferredoxin [Kocuria rhizophila DC2201] gi|183580700|dbj|BAG29171.1| 7Fe ferredoxin [Kocuria rhizophila DC2201] Length = 107 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACVEECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + K N E+ S AAK+ G K + P Sbjct: 61 TPEEWAEYYKANVEFFDDL-------GSPGGAAKL-GNTHKDHPLIAALP 102 >gi|332671395|ref|YP_004454403.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulomonas fimi ATCC 484] gi|332340433|gb|AEE47016.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas fimi ATCC 484] Length = 108 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ S AAKM G K + P Sbjct: 61 VPEQWSEYYKANVEFFDDL-------GSPGGAAKM-GEIDKDHPIIATLP 102 >gi|320094299|ref|ZP_08026090.1| ferredoxin [Actinomyces sp. oral taxon 178 str. F0338] gi|319978765|gb|EFW10317.1| ferredoxin [Actinomyces sp. oral taxon 178 str. F0338] Length = 114 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L IHP+EC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 +L+ N+++ ++ P A+ GV++ + + P Sbjct: 61 LPDEWSDYLRANADFFSEL--------GSPGGAQRTGVQEYDDPMIAALP 102 >gi|145222311|ref|YP_001132989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214797|gb|ABP44201.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 557 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PD++ P ++++N+ + + ++ LP +K+ V Sbjct: 59 GAIAPDSKLTPEQLPFVELNAAFYPK------REGKLPPTSKLAPV 98 >gi|257068295|ref|YP_003154550.1| ferredoxin [Brachybacterium faecium DSM 4810] gi|256559113|gb|ACU84960.1| ferredoxin [Brachybacterium faecium DSM 4810] Length = 109 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ C+ K CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 T + K N E+ + AAKM GV K P N Sbjct: 61 TPDQWAEYYKANVEFFDDL-------GAPGGAAKM-GVIDKDHPLIDALPPQPN 106 >gi|118462886|ref|YP_881360.1| ferredoxin [Mycobacterium avium 104] gi|254774861|ref|ZP_05216377.1| ferredoxin [Mycobacterium avium subsp. avium ATCC 25291] gi|118164173|gb|ABK65070.1| ferredoxin [Mycobacterium avium 104] Length = 108 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 P +L+IN+++ T+ Sbjct: 61 LPPEHSQYLQINADFFTE 78 >gi|309813204|ref|ZP_07706925.1| ferredoxin [Dermacoccus sp. Ellin185] gi|308432800|gb|EFP56711.1| ferredoxin [Dermacoccus sp. Ellin185] Length = 107 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 T + K N E+ S AAKM +K+ + P ++ Sbjct: 61 TPEEWADYYKANVEFFDDL-------GSPGGAAKMGVIKKDHPIIAVLPPQNQD 107 >gi|108802249|ref|YP_642446.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119871402|ref|YP_941354.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126438231|ref|YP_001073922.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108772668|gb|ABG11390.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119697491|gb|ABL94564.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126238031|gb|ABO01432.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 115 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 7/102 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGKACVDVMDRSCVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKES---LPSAAKMDGVK 97 L N+ + + + + E AAK+ V+ Sbjct: 61 LPADQREHLADNAAFF--FDTLAGRDEPLGSPGGAAKVGPVQ 100 >gi|188575948|ref|YP_001912877.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520400|gb|ACD58345.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] Length = 85 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNI 80 +DCF+ G NFL I PDECIDC +CEPECP +AI P+ G E ++ +N+E A WP + Sbjct: 1 MDCFHVGPNFLVIDPDECIDCTLCEPECPANAIYPEDDVPAGQEGFVALNAELAKVWPVL 60 Query: 81 TTKKESLPSAAKMDGVKQKYEKY 103 T ++E LP AA+ DG K Sbjct: 61 TVRQEPLPDAAEWDGKPNKLPLL 83 >gi|41408137|ref|NP_960973.1| FdxC_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396492|gb|AAS04356.1| FdxC_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 108 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 P +L+IN+++ T+ Sbjct: 61 LPPEHSQYLQINADFFTE 78 >gi|315442745|ref|YP_004075624.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase [Mycobacterium sp. Spyr1] gi|315261048|gb|ADT97789.1| NADPH-dependent glutamate synthase beta chain-like oxidoreductase [Mycobacterium sp. Spyr1] Length = 557 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 18/106 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVYACPVNCIHPSPDEPGFATAEMLYIDPVACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 AI PD++ P ++++N+ + + ++ LP +K+ V Sbjct: 59 GAIAPDSKLTPEQLPFVELNAAFYPK------REGKLPPTSKLAPV 98 >gi|182436183|ref|YP_001823902.1| putative ferredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|239944071|ref|ZP_04696008.1| putative ferredoxin [Streptomyces roseosporus NRRL 15998] gi|239990523|ref|ZP_04711187.1| putative ferredoxin [Streptomyces roseosporus NRRL 11379] gi|291447539|ref|ZP_06586929.1| 4Fe-4S binding domain containing protein [Streptomyces roseosporus NRRL 15998] gi|326776809|ref|ZP_08236074.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptomyces cf. griseus XylebKG-1] gi|178464699|dbj|BAG19219.1| putative ferredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|291350486|gb|EFE77390.1| 4Fe-4S binding domain containing protein [Streptomyces roseosporus NRRL 15998] gi|326657142|gb|EGE41988.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 106 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYAT 75 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEFFD 77 >gi|118469543|ref|YP_889369.1| ferredoxin [Mycobacterium smegmatis str. MC2 155] gi|118170830|gb|ABK71726.1| ferredoxin [Mycobacterium smegmatis str. MC2 155] Length = 107 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + N+++ + S A+K+ + P G++ Sbjct: 61 VPDQWSSYAQANADFFAEL-------GSPGGASKVGQTDNDPQAIKDLPPQGED 107 >gi|326384561|ref|ZP_08206240.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196695|gb|EGD53890.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 116 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPVDAI + Sbjct: 1 MTYVIALPCVDVMDRACVEECPVDCIYEGGRSLYIHPDECVDCGACEPVCPVDAIFYEDD 60 Query: 60 -EPGLELWLKINSEYA-TQWPNITTKKESLPSAAKMDGV 96 + N+++ T P S AAK+ V Sbjct: 61 LPDEWTPYTTDNADFFVTTLPGRDAPLGSPGGAAKIGPV 99 >gi|84494677|ref|ZP_00993796.1| ferredoxin [Janibacter sp. HTCC2649] gi|84384170|gb|EAQ00050.1| ferredoxin [Janibacter sp. HTCC2649] Length = 109 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 58/110 (52%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + K N E+ S AAKM G+ K + P Sbjct: 61 TPEQWADYYKANVEFFDDL-------GSPGGAAKM-GLINKDHPLIADLP 102 >gi|254774193|ref|ZP_05215709.1| ferredoxin [Mycobacterium avium subsp. avium ATCC 25291] Length = 108 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S AAK+ + + P G++ Sbjct: 61 VPDQWSQYTQINADFFAEL-------GSPGGAAKVGLTENDPQVVKDLPPQGED 107 >gi|239982109|ref|ZP_04704633.1| ferredoxin [Streptomyces albus J1074] gi|291453957|ref|ZP_06593347.1| ferredoxin [Streptomyces albus J1074] gi|291356906|gb|EFE83808.1| ferredoxin [Streptomyces albus J1074] Length = 106 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + K N E+ + P A G+ ++ + + P Sbjct: 61 TPEEWKDYYKANVEFFDEL--------GSPGGASKLGLIERDHPFIAELP 102 >gi|257054691|ref|YP_003132523.1| ferredoxin [Saccharomonospora viridis DSM 43017] gi|256584563|gb|ACU95696.1| ferredoxin [Saccharomonospora viridis DSM 43017] Length = 106 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDKSCIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + K N+++ + S AAK+ V + P G+ Sbjct: 61 VPDEWAAYTKANADFFEEL-------GSPGGAAKVGKVAHDPQWIKDLPPQGE 106 >gi|119952330|ref|YP_949931.1| putative ferredoxin-NADP reductase [Arthrobacter aurescens TC1] gi|119951460|gb|ABM10370.1| putative Ferredoxin-NADP reductase [Arthrobacter aurescens TC1] Length = 531 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 12/98 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 MTYV+T C C C+ VCPV C L I P CIDCG C ECPV Sbjct: 1 MTYVITHGC--CSDASCIPVCPVQCIRPRPGDPDFTTAEQLYIDPATCIDCGACMDECPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEYATQWPNITTKKESLP 88 AI P D L +L +N++Y P + + P Sbjct: 59 SAIHPEWDLPDELSEYLAVNADYYVDNPIVESSPVEPP 96 >gi|15827784|ref|NP_302047.1| ferredoxin [Mycobacterium leprae TN] gi|221230261|ref|YP_002503677.1| ferredoxin [Mycobacterium leprae Br4923] gi|13093336|emb|CAC30439.1| ferredoxin [Mycobacterium leprae] gi|219933368|emb|CAR71583.1| ferredoxin [Mycobacterium leprae Br4923] Length = 108 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN ++ + S AAK+ + + + P G+ Sbjct: 61 VPEQWSHYTQINVDFFVEL-------GSPGGAAKVGMAENDPQVIKNLAPQGEG 107 >gi|311898212|dbj|BAJ30620.1| putative 7Fe ferredoxin [Kitasatospora setae KM-6054] Length = 108 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYAT 75 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEFFD 77 >gi|296165553|ref|ZP_06848081.1| ferredoxin-NADP reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899092|gb|EFG78570.1| ferredoxin-NADP reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 539 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 46/88 (52%), Gaps = 12/88 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPV 52 MTYV+T++C CK CV VCPVDC G L I P CIDCG C CPV Sbjct: 1 MTYVITQSC--CKDASCVPVCPVDCIRPVGATGEITGTEMLYIDPVTCIDCGACVDACPV 58 Query: 53 DAI--KPDTEPGLELWLKINSEYATQWP 78 DAI + + P LE + INS Y P Sbjct: 59 DAIYYEEELPPELERFKDINSSYFEHHP 86 >gi|271969626|ref|YP_003343822.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270512801|gb|ACZ91079.1| 4Fe-4S ferredoxin iron-sulfur binding domain- containing protein [Streptosporangium roseum DSM 43021] Length = 108 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + K N ++ P A G K + P Sbjct: 61 LPDQWKDFYKANVDFFEDL--------GSPGGASKVGKINKDHPVVAVLP 102 >gi|119718522|ref|YP_925487.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119539183|gb|ABL83800.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 114 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E CI + CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MAYVIGEPCIDVQDRACVDECPVDCIYEGARSLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINS-EYATQWPNITTKKESLPSAAK 92 L+ + N+ +A P S AAK Sbjct: 61 LPAELQPYQDDNARFFAEVLPGRDRPIGSPGGAAK 95 >gi|33597853|ref|NP_885496.1| ferredoxin [Bordetella parapertussis 12822] gi|33602756|ref|NP_890316.1| ferredoxin [Bordetella bronchiseptica RB50] gi|33574282|emb|CAE38615.1| ferredoxin [Bordetella parapertussis] gi|33577198|emb|CAE35755.1| ferredoxin [Bordetella bronchiseptica RB50] Length = 90 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 2/86 (2%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYAT 75 ++VCPVDCF EG NFL I PDECIDC VC PECP +AI D ++ +N E + Sbjct: 1 MDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPANAIYAEEDVPQDQVPFIALNVELSA 60 Query: 76 QWPNITTKKESLPSAAKMDGVKQKYE 101 ++P+I+ K+ L A + +GV+ K + Sbjct: 61 EFPSISRAKKPLEDADQWNGVQDKLQ 86 >gi|21223505|ref|NP_629284.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|256785389|ref|ZP_05523820.1| ferredoxin [Streptomyces lividans TK24] gi|289769285|ref|ZP_06528663.1| ferredoxin [Streptomyces lividans TK24] gi|9967647|emb|CAC05765.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|289699484|gb|EFD66913.1| ferredoxin [Streptomyces lividans TK24] Length = 106 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|119715428|ref|YP_922393.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119536089|gb|ABL80706.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 108 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+++ C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVISQPCVDVKDRACVDECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 T + + N + S AAK+ + + P ++ Sbjct: 61 TPEEWKAYYDANVHFFDDL-------GSPGGAAKLGEIDHDHPMIAELPPQNQD 107 >gi|254381842|ref|ZP_04997205.1| ferredoxin [Streptomyces sp. Mg1] gi|194340750|gb|EDX21716.1| ferredoxin [Streptomyces sp. Mg1] Length = 108 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|314925701|gb|EFS89532.1| putative ferredoxin [Propionibacterium acnes HL036PA3] Length = 106 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CPV+A+ + Sbjct: 1 MTYVIGLPCVDVKDRACVEECPVDCIYEGERSLYIHPEECVDCGACEPVCPVEAVYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E +L IN+E+ + Sbjct: 61 LPGDQEKFLDINAEFFNE 78 >gi|239918039|ref|YP_002957597.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|281415782|ref|ZP_06247524.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|289705240|ref|ZP_06501639.1| putative ferredoxin [Micrococcus luteus SK58] gi|239839246|gb|ACS31043.1| ferredoxin [Micrococcus luteus NCTC 2665] gi|289557990|gb|EFD51282.1| putative ferredoxin [Micrococcus luteus SK58] Length = 108 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + K N E+ S AAK+ G+ K S P Sbjct: 61 TPDEWAEYYKANVEFFDDL-------GSPGGAAKL-GMIAKDHPIISALP 102 >gi|329939592|ref|ZP_08288893.1| ferredoxin [Streptomyces griseoaurantiacus M045] gi|329301162|gb|EGG45057.1| ferredoxin [Streptomyces griseoaurantiacus M045] Length = 106 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|262201358|ref|YP_003272566.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084705|gb|ACY20673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 527 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDA 54 +V+T++C C CV VCPV+C + + L I P+ CIDCG C CPVDA Sbjct: 2 FVITQSC--CSDAACVSVCPVNCIHPTPEERGFGSSDILHIDPEACIDCGACADACPVDA 59 Query: 55 IKPDTEPG--LELWLKINSEYATQWPNI 80 I P G ++++ IN+++ P + Sbjct: 60 IYPADRLGTRDKVFIDINADFYKNNPAV 87 >gi|152965106|ref|YP_001360890.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] gi|151359623|gb|ABS02626.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] Length = 136 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ + C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 30 TYVIAQPCVDVKDKACIEECPVDCIYEGNRSLYIQPDECVDCGACEPVCPVEAIYYEDDV 89 Query: 60 EPGLELWLKINSEYATQ 76 + N E+ Sbjct: 90 PEQWSAFTAANVEFFDT 106 >gi|311743743|ref|ZP_07717549.1| ferredoxin [Aeromicrobium marinum DSM 15272] gi|311312873|gb|EFQ82784.1| ferredoxin [Aeromicrobium marinum DSM 15272] Length = 107 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYVIAQPCVDLKDRACVDECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 E +EY + K S AAK+ V + + P + Sbjct: 61 TPAEW-----AEYYDANVHFFDKLGSPGGAAKLGVVDDDHPIIAALPPQNQ 106 >gi|118616772|ref|YP_905104.1| ferredoxin FdxC [Mycobacterium ulcerans Agy99] gi|118568882|gb|ABL03633.1| ferredoxin FdxC [Mycobacterium ulcerans Agy99] Length = 108 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + +IN+++ K S AAK+ + + P G+ Sbjct: 61 VPEQWSQYTQINADFFA-------KLGSPGGAAKVGMTENDPQVVKDLPPQGE 106 >gi|41408824|ref|NP_961660.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462225|ref|YP_882682.1| ferredoxin FdxA [Mycobacterium avium 104] gi|254775951|ref|ZP_05217467.1| putative ferredoxin FdxA [Mycobacterium avium subsp. avium ATCC 25291] gi|41397183|gb|AAS05043.1| FdxA [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163512|gb|ABK64409.1| putative ferredoxin FdxA [Mycobacterium avium 104] Length = 118 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 52/95 (54%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + CI CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIGKPCIDVMDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKIN-SEYATQWPNITTKKESLPSAAK 92 L+ L N + +A P S AAK Sbjct: 61 LPEDLKPHLADNEAFFAEPLPGRDAPLGSPGGAAK 95 >gi|296128848|ref|YP_003636098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas flavigena DSM 20109] gi|296020663|gb|ADG73899.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cellulomonas flavigena DSM 20109] Length = 108 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 9/102 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + + N + + S AAKM + + Sbjct: 61 VPEQWSQYYEANVHFFDE-------IGSPGGAAKMGEIAHDH 95 >gi|226309118|ref|YP_002769078.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226188235|dbj|BAH36339.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 575 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 12/86 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLHIDPQACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQ 76 DAI P+++ ++L IN+++ + Sbjct: 59 DAIVPESKLTDPQRVFLSINADFYKE 84 >gi|318058410|ref|ZP_07977133.1| ferredoxin [Streptomyces sp. SA3_actG] gi|318080441|ref|ZP_07987773.1| ferredoxin [Streptomyces sp. SA3_actF] Length = 106 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|118618608|ref|YP_906940.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] gi|118570718|gb|ABL05469.1| ferredoxin FdxA_1 [Mycobacterium ulcerans Agy99] Length = 115 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 4/116 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + CI CVE CPVDC YEG L IHPDE +DCG CEP CPV+AI + + Sbjct: 1 MTYVIGKPCIDVTDRACVEECPVDCIYEGGRSLYIHPDEFVDCGACEPVCPVEAIYYEDD 60 Query: 61 PGLE--LWLKIN-SEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 E L N + + P S AAK+ + + +P + Sbjct: 61 LPQELHPHLADNVAFFTETLPGRDGPLGSPGGAAKISRL-GVDTPLVAGHPQAADA 115 >gi|229491834|ref|ZP_04385655.1| ferredoxin--NADP+ reductase [Rhodococcus erythropolis SK121] gi|229321515|gb|EEN87315.1| ferredoxin--NADP+ reductase [Rhodococcus erythropolis SK121] Length = 575 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 12/86 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLHIDPQACVDCGACVSACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQ 76 DAI P+++ ++L IN+++ + Sbjct: 59 DAIVPESKLTDPQRVFLSINADFYKE 84 >gi|282865413|ref|ZP_06274465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282559886|gb|EFB65436.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 106 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYAT 75 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEFFD 77 >gi|256825753|ref|YP_003149713.1| ferredoxin [Kytococcus sedentarius DSM 20547] gi|256689146|gb|ACV06948.1| ferredoxin [Kytococcus sedentarius DSM 20547] Length = 107 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + N ++ S AAKM G+ K S P + Sbjct: 61 LPEEWADYYTANVDFFDDL-------GSPGGAAKM-GMIPKDHPLISALPPQGDA 107 >gi|325964023|ref|YP_004241929.1| ferredoxin [Arthrobacter phenanthrenivorans Sphe3] gi|323470110|gb|ADX73795.1| ferredoxin [Arthrobacter phenanthrenivorans Sphe3] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + K N E+ S AAK+ G K + P Sbjct: 61 TPEEWADYYKANVEFFDDL-------GSPGGAAKI-GNTGKDHPMIAALP 102 >gi|41408705|ref|NP_961541.1| FdxC_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465894|ref|YP_880561.1| ferredoxin [Mycobacterium avium 104] gi|41397063|gb|AAS04924.1| FdxC_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167181|gb|ABK68078.1| ferredoxin [Mycobacterium avium 104] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S AAK+ + + P G+ Sbjct: 61 VPDQWSQYTQINADFFAEL-------GSPGGAAKVGLTENDPQVVKDLPPQGEG 107 >gi|134097606|ref|YP_001103267.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291008475|ref|ZP_06566448.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|120023|sp|P24496|FER_SACER RecName: Full=Ferredoxin gi|1223836|gb|AAA92023.1| ferredoxin [Saccharopolyspora erythraea] gi|133910229|emb|CAM00342.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 106 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + K N ++ + S AAK+ V + E S P G+ Sbjct: 61 VPDEWAAYTKANVDFFDEL-------GSPGGAAKVGKVDRDVEPVSSLPPQGE 106 >gi|297192269|ref|ZP_06909667.1| ferredoxin [Streptomyces pristinaespiralis ATCC 25486] gi|190333637|gb|ACE73826.1| putative ferredoxin [Streptomyces peucetius ATCC 27952] gi|297151282|gb|EFH31065.1| ferredoxin [Streptomyces pristinaespiralis ATCC 25486] Length = 106 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|295836680|ref|ZP_06823613.1| ferredoxin [Streptomyces sp. SPB74] gi|302521743|ref|ZP_07274085.1| ferredoxin [Streptomyces sp. SPB78] gi|295826155|gb|EDY46645.2| ferredoxin [Streptomyces sp. SPB74] gi|302430638|gb|EFL02454.1| ferredoxin [Streptomyces sp. SPB78] Length = 137 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI DT Sbjct: 33 TYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDDT 92 Query: 60 EPGLELWLKINSEYATQ 76 + + K N E+ + Sbjct: 93 PEEWKDYYKANVEFFDE 109 >gi|326772206|ref|ZP_08231491.1| ferredoxin [Actinomyces viscosus C505] gi|326638339|gb|EGE39240.1| ferredoxin [Actinomyces viscosus C505] Length = 116 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E + + N ++ K P A+ GV + + P Sbjct: 61 VPEEWEDYTRANIDFFEL------KGLGSPGGAQRTGVLDYDDPMIAALP 104 >gi|254818770|ref|ZP_05223771.1| ferredoxin [Mycobacterium intracellulare ATCC 13950] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S AAK+ + + P G+ Sbjct: 61 VPDQWSQYTQINADFFAEL-------GSPGGAAKVGMTENDPQVVKDLPPQGEG 107 >gi|317506366|ref|ZP_07964177.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255329|gb|EFV14588.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 9/103 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDKACIEECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++ N+E+ + S AAK+ E Sbjct: 61 VPDEWTPFVTANAEFFDEL-------GSPGGAAKVGKTPHDAE 96 >gi|260906738|ref|ZP_05915060.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 110 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + CI K CV+ CPVDC YEGE L IHPDECIDCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCIDVKDKSCVDECPVDCIYEGERSLYIHPDECIDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N ++ + Sbjct: 61 VPEEWADYYTYNVDFFDE 78 >gi|320008744|gb|ADW03594.1| putative ferredoxin [Streptomyces flavogriseus ATCC 33331] Length = 106 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYAT 75 T + + K N E+ Sbjct: 61 TPEEWKDYYKANVEFFD 77 >gi|284033401|ref|YP_003383332.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Kribbella flavida DSM 17836] gi|283812694|gb|ADB34533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kribbella flavida DSM 17836] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDLKDLACVEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + N ++ P A G K + + P Sbjct: 61 TPEQWKDYYTANVDFFNDL--------GSPGGASKLGKIDKDHPFIAALP 102 >gi|220913278|ref|YP_002488587.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrobacter chlorophenolicus A6] gi|219860156|gb|ACL40498.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrobacter chlorophenolicus A6] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + K N E+ S AAK+ G K + P Sbjct: 61 TPDEWADYYKANVEFFDDL-------GSPGGAAKI-GNTGKDHPMIAALP 102 >gi|290957604|ref|YP_003488786.1| ferredoxin [Streptomyces scabiei 87.22] gi|260647130|emb|CBG70229.1| ferredoxin [Streptomyces scabiei 87.22] Length = 105 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|254818693|ref|ZP_05223694.1| FdxC_1 [Mycobacterium intracellulare ATCC 13950] Length = 108 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + + Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIFYEDD 60 Query: 61 PGLEL--WLKINSEYATQ 76 E +L+IN+++ + Sbjct: 61 LPDEHSGYLQINADFFAE 78 >gi|29829671|ref|NP_824305.1| ferredoxin [Streptomyces avermitilis MA-4680] gi|29606780|dbj|BAC70840.1| putative ferredoxin [Streptomyces avermitilis MA-4680] Length = 106 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|240171688|ref|ZP_04750347.1| ferredoxin FdxC [Mycobacterium kansasii ATCC 12478] Length = 108 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 VPDQWTQYTQINADFFDE 78 >gi|239929111|ref|ZP_04686064.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|291437447|ref|ZP_06576837.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|302558592|ref|ZP_07310934.1| ferredoxin [Streptomyces griseoflavus Tu4000] gi|291340342|gb|EFE67298.1| ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|302476210|gb|EFL39303.1| ferredoxin [Streptomyces griseoflavus Tu4000] Length = 105 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|189913023|ref|YP_001964912.1| Conserved ferredoxin oxidoreductase-like hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|189913352|ref|YP_001964581.1| Ferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167777699|gb|ABZ95999.1| Conserved ferredoxin oxidoreductase-like hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781420|gb|ABZ99717.1| Ferredoxin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 99 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M YVVTE C+ CK+T C VCPV+ F+E + L I PD CIDC C+ ECP+DAI P D Sbjct: 1 MAYVVTEICVDCKYTSCAAVCPVEAFHEAPDTLYIDPDTCIDCNACQYECPIDAIFPDYD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + +++N++ A ++P I T K L A D K Sbjct: 61 VPEKHKPSIEVNAKEANKFPVIVTTKPPLKGAKCSDPSK 99 >gi|328884828|emb|CCA58067.1| ferredoxin [Streptomyces venezuelae ATCC 10712] Length = 106 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 T + + K N E+ + S A+K+ +++ + + P Sbjct: 61 TPEEWKDYYKANVEFFDEL-------GSPGGASKLGEIERDHPFIAALPPQNG 106 >gi|320450842|ref|YP_004202938.1| conserved domain-containing protein [Thermus scotoductus SA-01] gi|320151011|gb|ADW22389.1| conserved domain protein [Thermus scotoductus SA-01] Length = 93 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P D Sbjct: 5 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIYPEED 64 Query: 59 TEPGLELWLKINSEYATQWPNI 80 +++++ N +A PN+ Sbjct: 65 VPEQWKVYIEKNRTWAQTLPNV 86 >gi|330813498|ref|YP_004357737.1| ferredoxin [Candidatus Pelagibacter sp. IMCC9063] gi|327486593|gb|AEA80998.1| ferredoxin [Candidatus Pelagibacter sp. IMCC9063] Length = 83 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L I+PDECIDCGVCEPECP+ AI+PDT G E + +N + + WP IT KK+ LP Sbjct: 1 MLVINPDECIDCGVCEPECPIGAIEPDTNDGAEKLVLLNKKLSETWPVITKKKDPLPDWE 60 Query: 92 KMDGVKQKYEKYFSPNPGGKN 112 K ++ K +KY+S G + Sbjct: 61 KFKDMENKLDKYYSEKAGPGD 81 >gi|254388886|ref|ZP_05004117.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294814826|ref|ZP_06773469.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|326443204|ref|ZP_08217938.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|197702604|gb|EDY48416.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294327425|gb|EFG09068.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] Length = 105 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGRRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|108800994|ref|YP_641191.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119870135|ref|YP_940087.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126436831|ref|YP_001072522.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108771413|gb|ABG10135.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119696224|gb|ABL93297.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126236631|gb|ABO00032.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 107 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + N+++ + S A+K+ + P G++ Sbjct: 61 VPDQWSAYTQYNADFFAEL-------GSPGGASKVGQTDNDPQAVKDLPPQGED 107 >gi|302542741|ref|ZP_07295083.1| ferredoxin [Streptomyces hygroscopicus ATCC 53653] gi|302460359|gb|EFL23452.1| ferredoxin [Streptomyces himastatinicus ATCC 53653] Length = 136 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI DT Sbjct: 30 TYVIAQPCVDLKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDDT 89 Query: 60 EPGLELWLKINSEYATQ 76 + + K N E+ + Sbjct: 90 PEEWKDYYKANVEFFDE 106 >gi|291191900|gb|ADD83007.1| PtnO9 [Streptomyces platensis] Length = 111 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ KH C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDLKHKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + K N E+ + P A G+ + + P Sbjct: 61 TPEEWKDYYKANVEFFDEL--------GSPGGAARLGLIDRDHPVVAAQP 102 >gi|300741914|ref|ZP_07071935.1| ferredoxin [Rothia dentocariosa M567] gi|300381099|gb|EFJ77661.1| ferredoxin [Rothia dentocariosa M567] Length = 106 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 10/113 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACVEECPVDCIYEGDRTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 ++ N+E+ S AAKM G K + + P Sbjct: 61 VPEEWSEYITANAEFFDDL-------GSPGGAAKM-GPTGKDVPFIAALPPQG 105 >gi|296166244|ref|ZP_06848683.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898428|gb|EFG77995.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 108 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ E C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV++I + + Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGERMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 61 PGLE--LWLKINSEYATQ 76 E + + N+++ + Sbjct: 61 LPAEYSQYTQFNADFFAE 78 >gi|257067244|ref|YP_003153499.1| ferredoxin [Brachybacterium faecium DSM 4810] gi|256558062|gb|ACU83909.1| ferredoxin [Brachybacterium faecium DSM 4810] Length = 109 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 54/114 (47%), Gaps = 10/114 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ C+ K CV+ CPVDC YEG L I PDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 T + N E+ S AAKM GV K P N Sbjct: 61 TPDQWAEYYNANVEFFDDL-------GSPGGAAKM-GVIDKDHPLVEALPPQPN 106 >gi|183984247|ref|YP_001852538.1| ferredoxin FdxC [Mycobacterium marinum M] gi|183177573|gb|ACC42683.1| ferredoxin FdxC [Mycobacterium marinum M] Length = 108 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + +IN+++ + S AAK+ + + P G+ Sbjct: 61 VPEQWSQYTQINADFFAEL-------GSPGGAAKVGMTENDPQVVKDLPPQGE 106 >gi|296169415|ref|ZP_06851037.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895917|gb|EFG75610.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 108 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ + S AAK+ + + P G+ Sbjct: 61 VPEQWSQYTQINADFFVEL-------GSPGGAAKVGMTENDPQVVKDLPPQGEG 107 >gi|239738513|gb|ACS13712.1| PtmO9 [Streptomyces platensis] Length = 111 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + K N E+ + P A G+ + + P Sbjct: 61 TPEEWKDYYKANVEFFDEL--------GSPGGAARLGMIDRDHPVVAAQP 102 >gi|269795884|ref|YP_003315339.1| ferredoxin [Sanguibacter keddieii DSM 10542] gi|269098069|gb|ACZ22505.1| ferredoxin [Sanguibacter keddieii DSM 10542] Length = 105 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ S AAKM G K P Sbjct: 61 VPDEWSEYYKANVEFFDDL-------GSPGGAAKM-GEIDKDHAVILALP 102 >gi|3334183|sp|Q45560|FER_BACSC RecName: Full=Ferredoxin 7Fe; AltName: Full=Seven-iron ferredoxin gi|474962|dbj|BAA06187.1| ferredoxin [Bacillus schlegelii] Length = 78 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI + Sbjct: 1 MAYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDF 60 Query: 60 -EPGLELWLKINSEYATQ 76 + +++ N ++ + Sbjct: 61 VPEEWKSYIQKNRDFFKK 78 >gi|331698393|ref|YP_004334632.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326953082|gb|AEA26779.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 114 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ C+ CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MAYVIGLPCVDVLDRACVDECPVDCIYEGERALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ-WPNITTKKESLPSAAK 92 L+ + N+ + + P S AAK Sbjct: 61 LPESLQEYQADNARFFAEPLPGRDAPLGSPGGAAK 95 >gi|283780772|ref|YP_003371527.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283439225|gb|ADB17667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 90 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT+VV + C CKHTDCV VCP DCF+EG+ L I PD CIDC C ECPV+AI D Sbjct: 1 MTHVVCKACFGCKHTDCVVVCPCDCFHEGDQMLYIDPDACIDCCACSSECPVEAIFIDDA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESL 87 ++++N+E TQ P+IT KK+ L Sbjct: 61 VPADQLAFIQLNAEMVTQTPSITQKKKPL 89 >gi|326778460|ref|ZP_08237725.1| Ferredoxin--NADP(+) reductase [Streptomyces cf. griseus XylebKG-1] gi|326658793|gb|EGE43639.1| Ferredoxin--NADP(+) reductase [Streptomyces cf. griseus XylebKG-1] Length = 554 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYAT 75 DAI P G + IN+ Y Sbjct: 59 DAIFPVDALSAGQREYADINAAYYE 83 >gi|297153736|gb|ADI03448.1| ferredoxin [Streptomyces bingchenggensis BCW-1] Length = 127 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + CI K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + + Sbjct: 1 MTYVIAQPCIDIKDRACVIECPVDCIYEGNRTLYINPAECVDCHACEPVCPVEAIFYEDD 60 Query: 61 PGLE--LWLKINSEYAT 75 + + IN+EY Sbjct: 61 LPQQWAQYKAINAEYFE 77 >gi|254449213|ref|ZP_05062662.1| ferredoxin, 4Fe-4S [gamma proteobacterium HTCC5015] gi|198261190|gb|EDY85486.1| ferredoxin, 4Fe-4S [gamma proteobacterium HTCC5015] Length = 85 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNI 80 +DCF+EG NFL I PD CIDC +C P CP +AI PD E G + +N+E + WP + Sbjct: 1 MDCFHEGPNFLVIDPDACIDCSLCVPACPAEAIYPDDELPEGQAHFTALNAELSKLWPVL 60 Query: 81 TTKKESLPSAAKMDGVKQKYEKY 103 K LP A DG K Sbjct: 61 DEPKAPLPDADDWDGEPDKLSHL 83 >gi|134100924|ref|YP_001106585.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] gi|291003463|ref|ZP_06561436.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] gi|133913547|emb|CAM03660.1| ferredoxin--NADP+ reductase [Saccharopolyspora erythraea NRRL 2338] Length = 508 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M Y +T+ C C CV+VCPV+C + + L I P CIDCG C CPV Sbjct: 1 MAYAITQTC--CNDASCVKVCPVNCIHPTPDEPDFGTAEMLHIDPATCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEYAT 75 +AI P + L+ + ++N+ Y Sbjct: 59 EAIFPVEELTGPLKPYAEVNAAYYA 83 >gi|116671359|ref|YP_832292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrobacter sp. FB24] gi|116611468|gb|ABK04192.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Arthrobacter sp. FB24] Length = 108 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + K N E+ + Sbjct: 61 TPDEWADYYKANVEFFDE 78 >gi|297202177|ref|ZP_06919574.1| ferredoxin [Streptomyces sviceus ATCC 29083] gi|197713616|gb|EDY57650.1| ferredoxin [Streptomyces sviceus ATCC 29083] Length = 105 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPDEWKDYYKANVEFFDE 78 >gi|116669636|ref|YP_830569.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrobacter sp. FB24] gi|116609745|gb|ABK02469.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Arthrobacter sp. FB24] Length = 106 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C++ CPVDC YEGE L IHP EC+DCG C+P CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIDECPVDCIYEGERSLYIHPSECVDCGACDPVCPVEAIYYSDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 +++ N E+ + Sbjct: 61 VPDEWADYIRANVEFFEE 78 >gi|239942291|ref|ZP_04694228.1| putative ferredoxin reductase [Streptomyces roseosporus NRRL 15998] gi|239988757|ref|ZP_04709421.1| putative ferredoxin reductase [Streptomyces roseosporus NRRL 11379] gi|291445751|ref|ZP_06585141.1| ferredoxin-NADP+ reductase [Streptomyces roseosporus NRRL 15998] gi|291348698|gb|EFE75602.1| ferredoxin-NADP+ reductase [Streptomyces roseosporus NRRL 15998] Length = 556 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 19/105 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 DAI P G + IN+ Y +E L ++DG Sbjct: 59 DAIFPVDSLSAGQREYADINAAYYEG-------EEPLSVGDEVDG 96 >gi|182437825|ref|YP_001825544.1| putative ferredoxin reductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466341|dbj|BAG20861.1| putative ferredoxin reductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 554 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRACIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYAT 75 DAI P G + IN+ Y Sbjct: 59 DAIFPVDALSAGQREYADINAAYYE 83 >gi|54023376|ref|YP_117618.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] gi|54014884|dbj|BAD56254.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152] Length = 529 Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YVVT++C C CV CPV+C + + L + P C+DCG C CPV Sbjct: 1 MPYVVTQSC--CSDASCVYACPVNCIHPTPDEPDFLTAEMLYVDPQACVDCGACATACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQ---WPNITTKKESL 87 DAI + +++IN+++ Q P + + Sbjct: 59 DAITSSKKLTAEQLPFIEINADFYRQERPRPLLARPVPAP 98 >gi|308177963|ref|YP_003917369.1| 4Fe-4S ferredoxin domain-containing protein [Arthrobacter arilaitensis Re117] gi|307745426|emb|CBT76398.1| 4Fe-4S ferredoxin domain-containing protein [Arthrobacter arilaitensis Re117] Length = 107 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ + C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAQPCVDVKDKACVEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N ++ + S AAK+ G S P Sbjct: 61 VPDEWADYYKANVDFFDEL-------GSPGGAAKI-GNTGTDHPLISALP 102 >gi|323359534|ref|YP_004225930.1| ferredoxin [Microbacterium testaceum StLB037] gi|323275905|dbj|BAJ76050.1| ferredoxin [Microbacterium testaceum StLB037] Length = 106 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ S AAK+ GV K + P Sbjct: 61 LPEEWSDYYKANVEFFDD-------IGSPGGAAKV-GVIAKDHPVITALP 102 >gi|296393263|ref|YP_003658147.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180410|gb|ADG97316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Segniliparus rotundus DSM 44985] Length = 108 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C+E CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVMDKACIEECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N+E+ + Sbjct: 61 VPDEWASFTTANAEFFDE 78 >gi|320450822|ref|YP_004202918.1| ferredoxin-1 [Thermus scotoductus SA-01] gi|320150991|gb|ADW22369.1| ferredoxin-1 [Thermus scotoductus SA-01] Length = 90 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P D Sbjct: 5 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIFPEED 64 Query: 59 TEPGLELWLKINSEYATQWPNITT 82 +++ N ++A PN+ T Sbjct: 65 VPEPWREYIEKNRQWARTLPNVHT 88 >gi|302553940|ref|ZP_07306282.1| ferredoxin [Streptomyces viridochromogenes DSM 40736] gi|302471558|gb|EFL34651.1| ferredoxin [Streptomyces viridochromogenes DSM 40736] Length = 134 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 TYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI DT Sbjct: 31 TYVIAQPCVDVKDKACIEECPVDCIYEGSRSLYIHPDECVDCGACEPVCPVEAIFYEDDT 90 Query: 60 EPGLELWLKINSEYATQ 76 + + K N E+ + Sbjct: 91 PEEWKDYYKANVEFFDE 107 >gi|254456143|ref|ZP_05069572.1| ferredoxin [Candidatus Pelagibacter sp. HTCC7211] gi|207083145|gb|EDZ60571.1| ferredoxin [Candidatus Pelagibacter sp. HTCC7211] Length = 77 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 46/76 (60%), Positives = 53/76 (69%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAA 91 L I PDECIDCGVCEPECPVDAI DTEPG E WL+IN++Y+ WPNI+ KK+ Sbjct: 1 MLVIKPDECIDCGVCEPECPVDAITADTEPGSEKWLEINTKYSEIWPNISEKKDPPTDHE 60 Query: 92 KMDGVKQKYEKYFSPN 107 K + KYEKYF N Sbjct: 61 KFKDEQNKYEKYFKEN 76 >gi|256832039|ref|YP_003160766.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685570|gb|ACV08463.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Jonesia denitrificans DSM 20603] Length = 105 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAKPCVDVKDKACIEECPVDCIYEGNRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + N E+ S AAKM G K P Sbjct: 61 VPEEWSEFYQANVEFFDDL-------GSPGGAAKM-GQIDKDHAIVEALP 102 >gi|227548437|ref|ZP_03978486.1| ferredoxin [Corynebacterium lipophiloflavum DSM 44291] gi|227079481|gb|EEI17444.1| ferredoxin [Corynebacterium lipophiloflavum DSM 44291] Length = 110 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTY++ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 4 MTYIIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 63 Query: 59 TEPGLELWLKINSEYAT 75 T + +N + Sbjct: 64 TPEEWADYYDVNVAFFD 80 >gi|300785297|ref|YP_003765588.1| ferredoxin--NADP+ reductase [Amycolatopsis mediterranei U32] gi|299794811|gb|ADJ45186.1| ferredoxin--NADP+ reductase [Amycolatopsis mediterranei U32] Length = 489 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + + L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CTDATCVSVCPVNCIHPTPDEPDFGTTDLLYIDPVTCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEYATQWPNITTKKESL 87 DAI P D L + +IN+EY + + Sbjct: 59 DAIFPAGDLTGPLRAYEQINAEYYAGRDVLAEVPVAP 95 >gi|307332364|ref|ZP_07611435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|297157503|gb|ADI07215.1| ferredoxin [Streptomyces bingchenggensis BCW-1] gi|306881977|gb|EFN13092.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 108 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDLKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + + K N E+ + Sbjct: 61 TPEEWKDYYKANVEFFDE 78 >gi|260904087|ref|ZP_05912409.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 107 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTY++ + C+ K CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MTYIIAQPCVDLKDKACVDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T + K N E+ + Sbjct: 61 TPEEWSEYYKANVEFFDE 78 >gi|296140639|ref|YP_003647882.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] gi|296028773|gb|ADG79543.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 510 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 12/100 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C C CPV+C + + L + P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDAACTFACPVNCIHPTPDEPGFATAEMLYVDPTTCVDCGACVTACPV 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 DAI P +++++IN A P ++ P A Sbjct: 59 DAIGPAHRLPEEHKVYIEINRSLAAADPANSSLGGPNPQA 98 >gi|297195797|ref|ZP_06913195.1| ferredoxin-NADP+ reductase [Streptomyces pristinaespiralis ATCC 25486] gi|297152954|gb|EFH32068.1| ferredoxin-NADP+ reductase [Streptomyces pristinaespiralis ATCC 25486] Length = 452 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCVAVCPVNCIHPTPEERAFGSTEMLYIDPRSCIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYAT 75 DAI P + + IN+ Y Sbjct: 59 DAIFPVDSLSGSQQEYAAINAAYFE 83 >gi|326330916|ref|ZP_08197216.1| ferredoxin [Nocardioidaceae bacterium Broad-1] gi|325951274|gb|EGD43314.1| ferredoxin [Nocardioidaceae bacterium Broad-1] Length = 107 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K CV+ CPVDC YEG+ L IHPDEC+DCG CEP CP +AI D Sbjct: 1 MTYVIAQPCVDVKDKACVDECPVDCIYEGKRMLYIHPDECVDCGACEPVCPPEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 T + + N ++ S AA+M G K + + P Sbjct: 61 TPEEWKEYYDANVKFFDDL-------GSPGGAARM-GEIDKDHPFVAALP 102 >gi|320531785|ref|ZP_08032710.1| putative ferredoxin [Actinomyces sp. oral taxon 171 str. F0337] gi|325067472|ref|ZP_08126145.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Actinomyces oris K20] gi|329944142|ref|ZP_08292401.1| ferredoxin [Actinomyces sp. oral taxon 170 str. F0386] gi|320135997|gb|EFW28020.1| putative ferredoxin [Actinomyces sp. oral taxon 171 str. F0337] gi|328530872|gb|EGF57728.1| ferredoxin [Actinomyces sp. oral taxon 170 str. F0386] Length = 116 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 8/110 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E + + N ++ K P A+ G + + P Sbjct: 61 VPEEWEDYTRANIDFFEL------KGLGSPGGAQRTGALDYDDPMIAALP 104 >gi|158312725|ref|YP_001505233.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|158108130|gb|ABW10327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 107 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 61 VPDQWKTFTDTNASFFEE 78 >gi|296395410|ref|YP_003660294.1| monooxygenase FAD-binding protein [Segniliparus rotundus DSM 44985] gi|296182557|gb|ADG99463.1| monooxygenase FAD-binding protein [Segniliparus rotundus DSM 44985] Length = 556 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 12/86 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CSDGSCVFACPVNCIHPTPDEPGFLTAETLHIDPAACVDCGACVHACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYATQ 76 DAI PD++ +L+IN+ + + Sbjct: 59 DAIAPDSKLTAEQLPFLEINASFFPK 84 >gi|121610433|ref|YP_998240.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121555073|gb|ABM59222.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 113 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M YV+T CI K CV+ CPVDC Y G L IHPDECIDCGVCEP CP AI D Sbjct: 1 MAYVITTGCIDVKDGACVQCCPVDCIYTGGRTLYIHPDECIDCGVCEPACPTQAIYEDHR 60 Query: 59 TEPGLELWLKINSEYA 74 L +L IN E+ Sbjct: 61 LPAPLRPFLAINREFF 76 >gi|154507672|ref|ZP_02043314.1| hypothetical protein ACTODO_00153 [Actinomyces odontolyticus ATCC 17982] gi|293189345|ref|ZP_06608068.1| ferredoxin [Actinomyces odontolyticus F0309] gi|153797306|gb|EDN79726.1| hypothetical protein ACTODO_00153 [Actinomyces odontolyticus ATCC 17982] gi|292821808|gb|EFF80744.1| ferredoxin [Actinomyces odontolyticus F0309] Length = 113 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEG L IHP+EC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGARSLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 +L+ N ++ P A+ GV+ + + P Sbjct: 61 LPSEWSDYLRANVDFFNDL--------GSPGGAQKTGVQDFDDPMIAALP 102 >gi|317125728|ref|YP_004099840.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Intrasporangium calvum DSM 43043] gi|315589816|gb|ADU49113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Intrasporangium calvum DSM 43043] Length = 108 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGIRTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + N E+ S AAKM +++ + + P Sbjct: 61 VPEQWADYYNANVEFFDDL-------GSPGGAAKMGQIQKDHPLILALPPQA 105 >gi|255326955|ref|ZP_05368031.1| ferredoxin [Rothia mucilaginosa ATCC 25296] gi|283457664|ref|YP_003362249.1| ferredoxin [Rothia mucilaginosa DY-18] gi|255296172|gb|EET75513.1| ferredoxin [Rothia mucilaginosa ATCC 25296] gi|283133664|dbj|BAI64429.1| ferredoxin [Rothia mucilaginosa DY-18] Length = 106 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CVE CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACVEECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 ++ N+++ S AAK+ G K + + P Sbjct: 61 VPEEWSEYVSANADFFDDL-------GSPGGAAKL-GPTGKDVPFIAALP 102 >gi|219848770|ref|YP_002463203.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543029|gb|ACL24767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 78 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+TE CI K CV VCPVDC YEG++ I+PDECIDCG CEPECPV+AI D Sbjct: 1 MPYVITEPCIGTKDASCVAVCPVDCIYEGDDQYYINPDECIDCGACEPECPVEAIFADDA 60 Query: 60 -EPGLELWLKINSEYA 74 + +++ N ++ Sbjct: 61 VPEQWKSYIEKNRKFF 76 >gi|297571981|ref|YP_003697755.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcanobacterium haemolyticum DSM 20595] gi|296932328|gb|ADH93136.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 107 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K CV+ CPVDC YEGE L IHPDEC+DCG CEP CP +AI + Sbjct: 1 MTYVIALPCVDVKDRACVDECPVDCIYEGERTLYIHPDECVDCGACEPVCPTEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + N E+ S A K+ + K + P G N Sbjct: 61 LPEEWSEYHRANVEFFDDL-------GSPGGATKLGPIA-KDHPLIAELPQGIN 106 >gi|88855520|ref|ZP_01130184.1| ferredoxin [marine actinobacterium PHSC20C1] gi|88815427|gb|EAR25285.1| ferredoxin [marine actinobacterium PHSC20C1] Length = 110 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ + C+ K C++ CPVDC YEG L IHPDEC+DCG C+P CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDKACIDACPVDCIYEGGRSLYIHPDECVDCGACDPVCPVEAIYYVDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 + + N ++ ++ Sbjct: 61 VPDKWGEYTQANVDFFSE 78 >gi|21225392|ref|NP_631171.1| ferredoxin [Streptomyces coelicolor A3(2)] gi|9885208|emb|CAC04216.1| ferredoxin [Streptomyces coelicolor A3(2)] Length = 129 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + + Sbjct: 1 MTYVIAQPCVDIKDRACVTECPVDCIYEGARTLYINPAECVDCHACEPVCPVEAIFHEDD 60 Query: 61 PG--LELWLKINSEYATQ 76 +L +N+EY + Sbjct: 61 LPRHWAHYLAVNAEYFDE 78 >gi|269955770|ref|YP_003325559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304451|gb|ACZ30001.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 105 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + N E+ S AAK+ G+ +K P Sbjct: 61 VPDQWKDYYGANVEFFDDL-------GSPGGAAKL-GLIEKDHPLVEALP 102 >gi|256783588|ref|ZP_05522019.1| ferredoxin [Streptomyces lividans TK24] gi|289767469|ref|ZP_06526847.1| ferredoxin [Streptomyces lividans TK24] gi|289697668|gb|EFD65097.1| ferredoxin [Streptomyces lividans TK24] Length = 129 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ K CV CPVDC YEG L I+P EC+DC CEP CPV+AI + + Sbjct: 1 MTYVIAQPCVDIKDRACVTECPVDCIYEGARTLYINPAECVDCHACEPVCPVEAIFHEDD 60 Query: 61 PG--LELWLKINSEYATQ 76 +L +N+EY + Sbjct: 61 LPRHWAHYLAVNAEYFDE 78 >gi|296170063|ref|ZP_06851666.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895273|gb|EFG74983.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 113 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 9/113 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TY + E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 7 TYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDV 66 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + +IN+++ T+ S AAK+ + + P G+ Sbjct: 67 PDQWSQYTQINADFFTEL-------GSPGGAAKVGLTENDPQVVKDLPPQGEG 112 >gi|331694874|ref|YP_004331113.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326949563|gb|AEA23260.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 108 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C+E CPVDC YEG + IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDLLDKACIEECPVDCIYEGGRMMYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + K N+E+ + S A+K+ V + + P + Sbjct: 61 VPEQWGAYQKANAEFFDEL-------GSPGGASKVGKVAKDAGPALTLPPQSHD 107 >gi|297562832|ref|YP_003681806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847280|gb|ADH69300.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 106 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ C++ CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACIDECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N ++ P A G + + P Sbjct: 61 LPEQWSDFYKANVDFFDDL--------GSPGGASKVGKIDRDHPLVAKLP 102 >gi|159039669|ref|YP_001538922.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Salinispora arenicola CNS-205] gi|157918504|gb|ABV99931.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Salinispora arenicola CNS-205] Length = 108 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + + N E+ P A G +K + + P Sbjct: 61 VPEQWKDYTAANYEFFEDL--------GSPGGASKIGKVEKDATFVAAQPPRGEA 107 >gi|295396223|ref|ZP_06806404.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294970930|gb|EFG46824.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 131 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TY++ + C+ K CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 28 TYIIAQPCVDLKDKACVDECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAIYYEDDV 87 Query: 60 EPGLELWLKINSEYATQ 76 + K N E+ + Sbjct: 88 PEQWAEYYKANVEFFDE 104 >gi|302524318|ref|ZP_07276660.1| ferredoxin [Streptomyces sp. AA4] gi|302433213|gb|EFL05029.1| ferredoxin [Streptomyces sp. AA4] Length = 106 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + K N ++ + Sbjct: 61 VPDNWSDYTKANVDFFNE 78 >gi|240168739|ref|ZP_04747398.1| FdxC_1 [Mycobacterium kansasii ATCC 12478] Length = 108 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + Sbjct: 1 MAYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + +IN+++ + Sbjct: 61 LPGEWNEYQQINADFFAE 78 >gi|86742537|ref|YP_482937.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86569399|gb|ABD13208.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 61 VPDQWKGYTDTNANFFEE 78 >gi|317506365|ref|ZP_07964176.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255328|gb|EFV14587.1| 4Fe-4S binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 112 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 3/110 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VV E C+ C+E CPVDC Y G + I+PD CIDCG CEP CPV+AI D Sbjct: 1 MAFVVAEPCVDVLDRSCLEECPVDCMYTGNRMVYINPDLCIDCGACEPVCPVEAIYFEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 G + + N+E+ P + + + GV Y + P Sbjct: 61 VPEGWSAFRQANAEFFKDIPGLPEPGSYSGNGTAL-GVIDHDAPYVAALP 109 >gi|41410450|emb|CAE51194.1| putative ferredoxin [Thermus thermophilus] Length = 87 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+ L IHPDECIDCG C P CPV+AI P D Sbjct: 1 MPHVICEPCIGVKDRSCQEVCPVECIYDAGEQLYIHPDECIDCGACVPACPVNAIYPEED 60 Query: 59 TEPGLELWLKINSEYATQWPNI 80 ++++ N +A PN+ Sbjct: 61 VPEQWRIYIEKNRTWAQTLPNV 82 >gi|254774707|ref|ZP_05216223.1| ferredoxin FdxA_1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 117 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSE-YATQWPNITTKKESLPSAAK 92 L+ + N+ ++ S AAK Sbjct: 61 LPEELQPYQADNAAFFSETLQGRDEPLGSPGGAAK 95 >gi|227494787|ref|ZP_03925103.1| possible ferredoxin [Actinomyces coleocanis DSM 15436] gi|226831239|gb|EEH63622.1| possible ferredoxin [Actinomyces coleocanis DSM 15436] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEG+ L IHP+EC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGQRSLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + N ++ K+ P A+ GV + ++ + P Sbjct: 61 LPEEWSDYYRANVDFF--------KEIGSPGGAQRTGVLEHDDEMIAALP 102 >gi|120012|sp|P00215|FER_MYCSM RecName: Full=Ferredoxin Length = 106 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 9/113 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDV 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + N+++ + S A+K+ + P G++ Sbjct: 61 PDQWSSYAQANADFFAEL-------GSPGGASKVGQTDNDPQAIKDLPPQGED 106 >gi|148273357|ref|YP_001222918.1| hypothetical protein CMM_2173 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831287|emb|CAN02243.1| fdxB [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 106 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N E+ + Sbjct: 61 LPEKWSDYYTANVEFFAE 78 >gi|238563896|ref|ZP_04610789.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] gi|238519725|gb|EEP83193.1| ferredoxin-1 [Burkholderia mallei GB8 horse 4] Length = 76 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLKINSEYA 74 + + +N+E A Sbjct: 61 VPGDQQHFTALNAELA 76 >gi|111225470|ref|YP_716264.1| ferredoxin [Frankia alni ACN14a] gi|111153002|emb|CAJ64749.1| Ferredoxin [Frankia alni ACN14a] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 61 VPDQWKGYTDTNANFFEE 78 >gi|19554145|ref|NP_602147.1| ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|62391799|ref|YP_227201.1| ferredoxin [Corynebacterium glutamicum ATCC 13032] gi|21325732|dbj|BAC00353.1| Ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|41327141|emb|CAF20985.1| FERREDOXIN [Corynebacterium glutamicum ATCC 13032] Length = 107 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELW--LKINSEYAT 75 E W N+ + Sbjct: 61 VPHEWWDYTGANAAFFD 77 >gi|170782550|ref|YP_001710883.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] gi|169157119|emb|CAQ02298.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] Length = 106 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N E+ + Sbjct: 61 LPEKWSDYYTANVEFFAE 78 >gi|50955230|ref|YP_062518.1| ferredoxin [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951712|gb|AAT89413.1| ferredoxin [Leifsonia xyli subsp. xyli str. CTCB07] Length = 106 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + K N E+ S AAK+ GV K + P Sbjct: 61 LPEEWADYYKANVEFFDD-------IGSPGGAAKV-GVIAKDHPIIAALP 102 >gi|254822186|ref|ZP_05227187.1| ferredoxin FdxA_1 [Mycobacterium intracellulare ATCC 13950] Length = 117 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ + C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MAYVIGKPCVDVMDRACVEECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSE-YATQWPNITTKKESLPSAAK 92 L+ + N+ ++ S AAK Sbjct: 61 LPEELQPYQADNAAFFSETLEGRDGPLGSPGGAAK 95 >gi|229819624|ref|YP_002881150.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beutenbergia cavernae DSM 12333] gi|229565537|gb|ACQ79388.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Beutenbergia cavernae DSM 12333] Length = 105 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 9/99 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDIKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 + K N E+ + S AAKM + Sbjct: 61 VPEQWAEYYKANVEFFDEL-------GSPGGAAKMGMIP 92 >gi|15807321|ref|NP_296051.1| ferredoxin [Deinococcus radiodurans R1] gi|6460141|gb|AAF11876.1|AE002064_7 ferredoxin [Deinococcus radiodurans R1] Length = 123 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C YEG IHPDECIDCG C P CPV AI P D Sbjct: 46 MPHVITSPCIGVKDQACTEVCPVECIYEGGEQFFIHPDECIDCGACVPACPVSAIFPEED 105 Query: 59 TEPGLELWLKINSEYA 74 G + ++ NS + Sbjct: 106 VPDGEQDFIVKNSAHF 121 >gi|225022906|ref|ZP_03712098.1| hypothetical protein CORMATOL_02952 [Corynebacterium matruchotii ATCC 33806] gi|305682158|ref|ZP_07404962.1| ferredoxin [Corynebacterium matruchotii ATCC 14266] gi|224944129|gb|EEG25338.1| hypothetical protein CORMATOL_02952 [Corynebacterium matruchotii ATCC 33806] gi|305658631|gb|EFM48134.1| ferredoxin [Corynebacterium matruchotii ATCC 14266] Length = 105 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVMDRACVEECPVDCIYEGQRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 ++ N+ + Sbjct: 61 VPDEWIDYIDANAAFFD 77 >gi|148271844|ref|YP_001221405.1| hypothetical protein CMM_0665 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829774|emb|CAN00693.1| fdxA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 108 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N E+ + Sbjct: 61 LPEKWSDYYTANVEFFAE 78 >gi|297626788|ref|YP_003688551.1| Ferredoxin [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922553|emb|CBL57126.1| Ferredoxin [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 106 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ K CVE CPVDC YEGE L IHP+EC+DCG CEP CP +AI + + Sbjct: 1 MTYVIALPCVDVKDKACVEECPVDCIYEGERTLYIHPEECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLE--LWLKINSEYATQ 76 E W +N+ + ++ Sbjct: 61 LPDEYKEWYDVNANFFSE 78 >gi|312194598|ref|YP_004014659.1| ferredoxin [Frankia sp. EuI1c] gi|311225934|gb|ADP78789.1| ferredoxin [Frankia sp. EuI1c] Length = 107 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 61 VPEQWKPYTDTNASFFEE 78 >gi|256374918|ref|YP_003098578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Actinosynnema mirum DSM 43827] gi|255919221|gb|ACU34732.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Actinosynnema mirum DSM 43827] Length = 108 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAQPCVDVLDKACIEECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 + K N ++ Sbjct: 61 VPDEWSAYTKANVDFFD 77 >gi|269219106|ref|ZP_06162960.1| ferredoxin [Actinomyces sp. oral taxon 848 str. F0332] gi|269211253|gb|EEZ77593.1| ferredoxin [Actinomyces sp. oral taxon 848 str. F0332] Length = 106 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 10/113 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ C+ CV+ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIALPCVDVMDRACVDECPVDCIYEGERTLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 ++ +N+E+ P A+ G Y + P Sbjct: 61 LPEEWSVFESVNAEFFD--------DIGSPGGAQRLGPTGSDHPYVAGLPPQG 105 >gi|319950850|ref|ZP_08024734.1| 7Fe ferredoxin [Dietzia cinnamea P4] gi|319435505|gb|EFV90741.1| 7Fe ferredoxin [Dietzia cinnamea P4] Length = 107 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 54/96 (56%), Gaps = 5/96 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + E C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAEPCVDVMDKSCVEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 E W + N+ A + + S AAK+ V Sbjct: 61 VPDE-WTEYNAANADFFVEL----GSPGGAAKVGKV 91 >gi|118618156|ref|YP_906488.1| ferredoxin FdxC_1 [Mycobacterium ulcerans Agy99] gi|183983410|ref|YP_001851701.1| ferredoxin FdxC_1 [Mycobacterium marinum M] gi|118570266|gb|ABL05017.1| ferredoxin FdxC_1 [Mycobacterium ulcerans Agy99] gi|183176736|gb|ACC41846.1| ferredoxin FdxC_1 [Mycobacterium marinum M] Length = 108 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV++I + + Sbjct: 1 MTYVIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVESIYYEDD 60 Query: 61 PGLEL--WLKINSEYATQ 76 E + +IN ++ ++ Sbjct: 61 LPAEYSGYTQINVDFFSE 78 >gi|300782955|ref|YP_003763246.1| ferredoxin [Amycolatopsis mediterranei U32] gi|269784343|emb|CBH51373.1| ferredoxin [Amycolatopsis balhimycina] gi|299792469|gb|ADJ42844.1| ferredoxin [Amycolatopsis mediterranei U32] Length = 106 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + K N ++ + Sbjct: 61 VPDNWSDYTKANVDFFDE 78 >gi|258654428|ref|YP_003203584.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258557653|gb|ACV80595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 108 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVLDRACVEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + N ++ S A+K V + + P G++ Sbjct: 61 VPAEWADYTRANVDFFDDL-------GSPGGASKTGKVAKDDPMVAALPPMGED 107 >gi|296119440|ref|ZP_06837998.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] gi|295967323|gb|EFG80590.1| ferredoxin [Corynebacterium ammoniagenes DSM 20306] Length = 107 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E WL+ N A + ++ + + Sbjct: 61 VPDE-WLEYNDANAAFFDDLGSPGGA 85 >gi|226228428|ref|YP_002762534.1| ferredoxin [Gemmatimonas aurantiaca T-27] gi|226091619|dbj|BAH40064.1| ferredoxin [Gemmatimonas aurantiaca T-27] Length = 87 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 43/77 (55%), Positives = 50/77 (64%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M YV+TE CI K CV+VCPVDC YEGE+ L I+PDECIDCG CEPECPV AI P D Sbjct: 1 MPYVITEACISVKDRSCVDVCPVDCIYEGEDQLYINPDECIDCGACEPECPVTAIFPEED 60 Query: 59 TEPGLELWLKINSEYAT 75 L ++ N + Sbjct: 61 VPTQLRSFIAKNKDVFE 77 >gi|320012396|gb|ADW07246.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Streptomyces flavogriseus ATCC 33331] Length = 556 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCVSVCPVNCIHPTPEEPDFGRTEMLYIDPRSCIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYAT 75 +A+ P + IN+EY Sbjct: 59 EAVFPVDSLPAAQAEYGPINAEYFA 83 >gi|302869764|ref|YP_003838401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315503754|ref|YP_004082641.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora sp. L5] gi|330469998|ref|YP_004407741.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Verrucosispora maris AB-18-032] gi|302572623|gb|ADL48825.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315410373|gb|ADU08490.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Micromonospora sp. L5] gi|328812969|gb|AEB47141.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Verrucosispora maris AB-18-032] Length = 108 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + N E+ P A G +K + + P Sbjct: 61 VPEQWKDYTGANYEFFEDL--------GSPGGASKIGKVEKDATFVAAQP 102 >gi|120029|sp|P13279|FER_STRGR RecName: Full=Ferredoxin Length = 105 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 TYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI DT Sbjct: 1 TYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFYEDDT 60 Query: 60 EPGLELWLKINSEYAT 75 + + K N E+ Sbjct: 61 PEEWKDYYKANVEFFD 76 >gi|297564678|ref|YP_003683650.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849127|gb|ADH62142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 79 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+TE CI K CVEVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 59 TEPGLELWLKINSEYA 74 + ++ N + + Sbjct: 61 VPAEFQSYIAKNRKLS 76 >gi|145220987|ref|YP_001131665.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145213473|gb|ABP42877.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium gilvum PYR-GCK] Length = 142 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 26 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 85 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNPGG 110 E +L N+ + T ++ + E L P A G + P Sbjct: 86 LPDEELAFLDDNAAFFTT--TLSGRDEPLGDPGGAAKLGRVGADTPLVAALPAS 137 >gi|169628420|ref|YP_001702069.1| ferredoxin FdxC [Mycobacterium abscessus ATCC 19977] gi|169240387|emb|CAM61415.1| Probable ferredoxin FdxC [Mycobacterium abscessus] Length = 123 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 17 TYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDDV 76 Query: 62 GLEL--WLKINSEYA 74 + +++ N+++ Sbjct: 77 PDQWTGYIQSNADFF 91 >gi|238060947|ref|ZP_04605656.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] gi|237882758|gb|EEP71586.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] Length = 108 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 + + N E+ P A G +K + + P Sbjct: 61 VPEQWKDYTGANYEFFEDL--------GSPGGASKIGKVEKDATFVAGQP 102 >gi|302527244|ref|ZP_07279586.1| ferredoxin-NADP+ reductase [Streptomyces sp. AA4] gi|302436139|gb|EFL07955.1| ferredoxin-NADP+ reductase [Streptomyces sp. AA4] Length = 500 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + + L + P CIDCG C CPV Sbjct: 1 MAFAITQTC--CNDATCVSVCPVNCIHPTPDEPDFGTTEMLYVDPASCIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKINSEYATQWPNITTKKES 86 DAI P ++++ IN+++ P + Sbjct: 59 DAIFPVDLLTDSMKVYAGINADFFADRPAVAANPAP 94 >gi|145596271|ref|YP_001160568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Salinispora tropica CNB-440] gi|145305608|gb|ABP56190.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Salinispora tropica CNB-440] Length = 108 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 + + N E+ Sbjct: 61 VPEQWKDYTAANYEFFE 77 >gi|308234735|ref|ZP_07665472.1| putative ferredoxin 1 [Gardnerella vaginalis ATCC 14018] gi|311115179|ref|YP_003986400.1| ferredoxin [Gardnerella vaginalis ATCC 14019] gi|310946673|gb|ADP39377.1| ferredoxin [Gardnerella vaginalis ATCC 14019] Length = 106 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 2/98 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 E + EY + ++ +E+ PS D V Sbjct: 61 VPEEWEWYKDAAIEYFNKLGDLGGAQEAGPSGWDEDRV 98 >gi|226366514|ref|YP_002784297.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226245004|dbj|BAH55352.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 107 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ C+E CPVDC YEG + IHPDEC+DCG CEP CPV+AI D + Sbjct: 1 MPYVIAEPCVDVLDKACIEECPVDCIYEGGRMMYIHPDECVDCGACEPVCPVEAIFFDDD 60 Query: 61 PGLEL--WLKINSEYATQ 76 + ++ N+E+ + Sbjct: 61 LPDQWSGYVSSNAEFFDE 78 >gi|291302949|ref|YP_003514227.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572169|gb|ADD45134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Stackebrandtia nassauensis DSM 44728] Length = 106 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 10/112 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDLLDKACIEECPVDCIYEGNRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + N E+ + P A G +K + + P Sbjct: 61 VPEEWSDYTGANYEFFEEL--------GSPGGASKVGKIEKDATFVASRPAK 104 >gi|148654468|ref|YP_001274673.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus sp. RS-1] gi|156740275|ref|YP_001430404.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|148566578|gb|ABQ88723.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Roseiflexus sp. RS-1] gi|156231603|gb|ABU56386.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Roseiflexus castenholzii DSM 13941] Length = 78 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M Y++ E CI K CV VCPVDC YEGE+ I+P+ECIDCG CEPECPV+AI D Sbjct: 1 MAYIIAEPCIGVKDASCVAVCPVDCIYEGEDQYYINPEECIDCGACEPECPVEAIFADDS 60 Query: 60 -EPGLELWLKINSEYA 74 +++ N + Sbjct: 61 VPEQWHSYIEKNRAFF 76 >gi|157830220|pdb|1BC6|A Chain A, 7-Fe Ferredoxin From Bacillus Schlegelii, Nmr, 20 Structures Length = 77 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI + Sbjct: 1 AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFV 60 Query: 60 EPGLELWLKINSEYATQ 76 + +++ N ++ + Sbjct: 61 PEEWKSYIQKNRDFFKK 77 >gi|163847117|ref|YP_001635161.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524953|ref|YP_002569424.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668406|gb|ABY34772.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448832|gb|ACM53098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 78 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M Y++ E CI K CV VCPVDC YEG++ I+PDECIDCG CEPECPV+AI D Sbjct: 1 MPYIIAEPCIGTKDASCVAVCPVDCIYEGDDQYYINPDECIDCGACEPECPVEAIFADDS 60 Query: 60 -EPGLELWLKINSEYAT 75 + +++ N ++ Sbjct: 61 VPEQWKSYIEKNRKFFE 77 >gi|289640678|ref|ZP_06472850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia symbiont of Datisca glomerata] gi|289509567|gb|EFD30494.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia symbiont of Datisca glomerata] Length = 107 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDKACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 61 VPDQWKGFADSNALFFEE 78 >gi|319441049|ref|ZP_07990205.1| hypothetical protein CvarD4_04702 [Corynebacterium variabile DSM 44702] Length = 107 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 E ++ N+ + Sbjct: 61 LPDEWEDYIDFNTAFFD 77 >gi|297564743|ref|YP_003683715.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849192|gb|ADH62207.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 86 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K C EVCPV+C Y+G + L IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVIAEPCIGVKDRSCQEVCPVECIYDGGDQLYIHPDECIDCGACVPACPVSAIYPQED 60 Query: 59 TEPGLELWLKINSEYAT 75 +++ N + Sbjct: 61 LPAEWYSYIEKNRRLSA 77 >gi|282862944|ref|ZP_06272004.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282561926|gb|EFB67468.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 548 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C C+ VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CSDATCIAVCPVNCIHPTPEERDFGSTEMLHIDPKSCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKINSEYAT 75 DAI P L + +IN+ Y Sbjct: 59 DAIFPVESLTGALREYEQINAAYYE 83 >gi|258593114|emb|CBE69425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein (modular protein) [NC10 bacterium 'Dutch sediment'] Length = 113 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M YVV + CI K CV+VCPV+CFYEGE L IHP+ECIDC CEPECPV AI Sbjct: 1 MAYVVADPCIGTKDHACVDVCPVECFYEGEELLFIHPEECIDCAACEPECPVAAIFEASQ 60 Query: 59 TEPGLELWLKINSE 72 + ++++N++ Sbjct: 61 VPEQWQHFIQMNAD 74 >gi|288920898|ref|ZP_06415194.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288347730|gb|EFC82011.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 107 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ K C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDVKDRACIEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 +++ N+ + + Sbjct: 61 VPEQWKVYADNNATFFEE 78 >gi|269925717|ref|YP_003322340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789377|gb|ACZ41518.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 81 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 50/79 (63%), Gaps = 4/79 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+TE CI K CVEVCPVDC Y + IHPDECIDCG CEPECPV AI P+ Sbjct: 1 MPYVITEPCIGVKDASCVEVCPVDCIYTDDEAPMYYIHPDECIDCGACEPECPVSAIYPE 60 Query: 59 T--EPGLELWLKINSEYAT 75 + +++IN++Y Sbjct: 61 DSVPEQWQHYIQINADYFK 79 >gi|260577611|ref|ZP_05845549.1| ferredoxin [Corynebacterium jeikeium ATCC 43734] gi|258604264|gb|EEW17503.1| ferredoxin [Corynebacterium jeikeium ATCC 43734] Length = 105 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 E + N+ + Sbjct: 61 VPDEWEEYNDANAAFFD 77 >gi|328949904|ref|YP_004367239.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328450228|gb|AEB11129.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 79 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+TE CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITEPCIGVKDQSCTEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 59 TEPGLELWLKINSEYA 74 +++ N + A Sbjct: 61 VPEQWVSFIEKNRKLA 76 >gi|226304299|ref|YP_002764257.1| ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] gi|226183414|dbj|BAH31518.1| putative ferredoxin--NADP(+) reductase [Rhodococcus erythropolis PR4] Length = 574 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV VCP +C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDAACVVVCPANCIHPTPDEPDYARTEILYIDPRSCVDCGACIQACPV 58 Query: 53 DAIKPDTE--PGLELWLKINSEYAT 75 DAI P E P + ++N+ Y Sbjct: 59 DAIVPHDELTPQTIRYAELNALYFA 83 >gi|25027716|ref|NP_737770.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259506882|ref|ZP_05749782.1| ferredoxin [Corynebacterium efficiens YS-314] gi|23492998|dbj|BAC17970.1| putative ferredoxin [Corynebacterium efficiens YS-314] gi|259165514|gb|EEW50068.1| ferredoxin [Corynebacterium efficiens YS-314] Length = 105 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E W+ N A + ++ + + Sbjct: 61 VPDE-WIDYNEANAAFFDDLGSPGGA 85 >gi|297242981|ref|ZP_06926919.1| ferredoxin [Gardnerella vaginalis AMD] gi|296889192|gb|EFH27926.1| ferredoxin [Gardnerella vaginalis AMD] Length = 110 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 G E + +Y + ++ ++ A+ D Sbjct: 61 LPEGWEWYRDAAVDYFDKLGDLGGATDA--GASGWD 94 >gi|121599359|ref|YP_993807.1| ferredoxin [Burkholderia mallei SAVP1] gi|226197927|ref|ZP_03793501.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] gi|121228169|gb|ABM50687.1| ferredoxin [Burkholderia mallei SAVP1] gi|225930115|gb|EEH26128.1| putative ferredoxin [Burkholderia pseudomallei Pakistan 9] Length = 85 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYATQWPNI 80 +DCF EG NFLAI PDECIDC VC ECP +AI D + + +N+E A WP+I Sbjct: 1 MDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEEDVPGDQQHFTALNAELAKDWPSI 60 Query: 81 TTKKESLPSAAKMDGVKQKYEKY 103 T K + A + V++K Sbjct: 61 TKTKPAPADADEWKDVQEKLHLL 83 >gi|283782746|ref|YP_003373500.1| putative ferredoxin 1 [Gardnerella vaginalis 409-05] gi|283442204|gb|ADB14670.1| putative ferredoxin 1 [Gardnerella vaginalis 409-05] Length = 110 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 G E + +Y + ++ ++ A+ D Sbjct: 61 LPDGWEWYRDAAVDYFDKLGDLGGATDA--GASGWD 94 >gi|325002600|ref|ZP_08123712.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Pseudonocardia sp. P1] Length = 108 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 9/114 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAEPCVDLLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKN 112 + K N ++ + S A+K+ V E S P + Sbjct: 61 VPDQWAAYTKANVDFFDEL-------GSPGGASKVGKVDMDVEPAKSLPPQEHD 107 >gi|28493542|ref|NP_787703.1| ferredoxin [Tropheryma whipplei str. Twist] gi|28572347|ref|NP_789127.1| ferredoxin [Tropheryma whipplei TW08/27] gi|28410478|emb|CAD66864.1| ferredoxin [Tropheryma whipplei TW08/27] gi|28476584|gb|AAO44672.1| ferredoxin [Tropheryma whipplei str. Twist] Length = 108 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 10/115 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ K C++ CPVDC YEG L I+PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYVIAFPCVDLKDRACIDECPVDCIYEGGRSLYINPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 + + N E+ + S AAK+ V + P ++ Sbjct: 61 LPEEWGEYYRANVEFFDE-------IGSPGGAAKLGPV-DFDHPIIAQLPKSSDS 107 >gi|298346081|ref|YP_003718768.1| putative ferredoxin [Mobiluncus curtisii ATCC 43063] gi|304390160|ref|ZP_07372114.1| ferredoxin [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654663|ref|ZP_07907569.1| ferredoxin [Mobiluncus curtisii ATCC 51333] gi|315657420|ref|ZP_07910302.1| ferredoxin [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236142|gb|ADI67274.1| possible ferredoxin [Mobiluncus curtisii ATCC 43063] gi|304326642|gb|EFL93886.1| ferredoxin [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491127|gb|EFU80746.1| ferredoxin [Mobiluncus curtisii ATCC 51333] gi|315491892|gb|EFU81501.1| ferredoxin [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 107 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 8/113 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L I+P EC+DCG CEP CP AI + Sbjct: 1 MTYVIAQPCVDVKDKACVDECPVDCIYEGERTLYINPLECVDCGACEPVCPPQAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 +L+ ++ + N P A + G K + + P Sbjct: 61 LPEPWTDFLRAGRDFFADFDN------PTPGGASVVGKVDKDDPMIAALPPQG 107 >gi|227497862|ref|ZP_03928046.1| possible ferredoxin [Actinomyces urogenitalis DSM 15434] gi|226832711|gb|EEH65094.1| possible ferredoxin [Actinomyces urogenitalis DSM 15434] Length = 117 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEGE L I+ DEC+DCG CEP CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGERSLYINADECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQW----PNITTKKESLP 88 + + N ++ + P K +LP Sbjct: 61 VPEEWSDYTRANIDFFSLKDLGSPGGAQKTGALP 94 >gi|68536481|ref|YP_251186.1| hypothetical protein jk1395 [Corynebacterium jeikeium K411] gi|68264080|emb|CAI37568.1| fdxA [Corynebacterium jeikeium K411] Length = 105 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 E + N+ + Sbjct: 61 VPDEWEEYNDANAAFFD 77 >gi|111021988|ref|YP_704960.1| ferredoxin [Rhodococcus jostii RHA1] gi|226364495|ref|YP_002782277.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|110821518|gb|ABG96802.1| ferredoxin [Rhodococcus jostii RHA1] gi|226242984|dbj|BAH53332.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 108 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 9/98 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 + + K N+++ S AAK+ V Sbjct: 61 VPDQWVEYTKANADFFDDL-------GSPGGAAKLGKV 91 >gi|38233568|ref|NP_939335.1| ferredoxin [Corynebacterium diphtheriae NCTC 13129] gi|38199828|emb|CAE49491.1| ferredoxin [Corynebacterium diphtheriae] Length = 105 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E W+ N A + ++ + + Sbjct: 61 VPDE-WIDYNDANAAFFDSLGSPGGA 85 >gi|226307668|ref|YP_002767628.1| 7Fe ferredoxin [Rhodococcus erythropolis PR4] gi|229493921|ref|ZP_04387693.1| ferredoxin [Rhodococcus erythropolis SK121] gi|226186785|dbj|BAH34889.1| 7Fe ferredoxin [Rhodococcus erythropolis PR4] gi|229319198|gb|EEN85047.1| ferredoxin [Rhodococcus erythropolis SK121] Length = 107 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 9/98 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 ++ N ++ S AAK+ V Sbjct: 61 VPDQWNAYISTNVDFFDDL-------GSPGGAAKLGKV 91 >gi|326381449|ref|ZP_08203143.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199696|gb|EGD56876.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 108 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ CVE CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVLDRACVEECPVDCIYEGGRMLYIQPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E ++ N ++ + Sbjct: 61 VPDEWEPYVSANVDFFEE 78 >gi|298253085|ref|ZP_06976877.1| ferredoxin [Gardnerella vaginalis 5-1] gi|297532480|gb|EFH71366.1| ferredoxin [Gardnerella vaginalis 5-1] Length = 110 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CPV+AI + Sbjct: 1 MPYVIAEPCVDVKDKACVDECPVDCIYEGDRTLYINPNECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 E + +Y + ++ ++ A+ D Sbjct: 61 LPEDWEWYRDAAVDYFDKLGDLGGATDA--GASGWD 94 >gi|157830233|pdb|1BD6|A Chain A, 7-Fe Ferredoxin From Bacillus Schlegelii, Nmr, Minimized Average Structure Length = 77 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--E 60 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI + Sbjct: 2 YVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVP 61 Query: 61 PGLELWLKINSEYATQ 76 + +++ N ++ + Sbjct: 62 EEWKSYIQKNRDFFKK 77 >gi|328887041|emb|CCA60280.1| Ferredoxin or Ferredoxin--NADP(+) reductase,actinobacterial (eukaryote) type [Streptomyces venezuelae ATCC 10712] Length = 552 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEEPDFGTTEMLYIDPKSCIDCGACADACPV 58 Query: 53 DAIKPDTEPG--LELWLKINSEYAT 75 DAI P L + IN+ + Sbjct: 59 DAIFPADRLTGRLREYEAINAAHYA 83 >gi|298248993|ref|ZP_06972797.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|298250987|ref|ZP_06974791.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297546997|gb|EFH80864.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297548991|gb|EFH82858.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 86 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 10/85 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 MTYV+T+ C+ K CV+VCPVDC + E L I+PDECIDCG CEP CPV Sbjct: 1 MTYVITQPCVGVKDASCVDVCPVDCIHPTQSEAGFESSEQLYINPDECIDCGACEPVCPV 60 Query: 53 DAIKPD--TEPGLELWLKINSEYAT 75 AI + ++KIN+++ Sbjct: 61 TAIFEESAVPEEWNQYIKINADFFK 85 >gi|312138850|ref|YP_004006186.1| ferredoxin [Rhodococcus equi 103S] gi|325676447|ref|ZP_08156125.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|311888189|emb|CBH47501.1| putative ferredoxin [Rhodococcus equi 103S] gi|325552625|gb|EGD22309.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 107 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 9/98 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAEPCVDVMDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGV 96 + ++ N ++ S AAK+ V Sbjct: 61 VPDQWNGYVAANVDFFDDL-------GSPGGAAKLGKV 91 >gi|24217168|ref|NP_714651.1| ferredoxin [Leptospira interrogans serovar Lai str. 56601] gi|45655667|ref|YP_003476.1| ferredoxin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24202210|gb|AAN51666.1| hypothetical protein LB_107 [Leptospira interrogans serovar Lai str. 56601] gi|45602638|gb|AAS72113.1| ferredoxin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 99 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE C CK+T C VCPV+ F EG + L I P CIDC C PECPV+AI PD E Sbjct: 1 MAYVVTEPCRNCKYTYCAAVCPVEAFREGTDCLYIEPSVCIDCNKCRPECPVEAIYPDYE 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESL 87 W+++N++ A +P I K L Sbjct: 61 VPFVWRDWIEVNAQKAKCYPTILDVKIPL 89 >gi|183601928|ref|ZP_02963297.1| ferredoxin [Bifidobacterium animalis subsp. lactis HN019] gi|219682842|ref|YP_002469225.1| ferredoxin [Bifidobacterium animalis subsp. lactis AD011] gi|241190418|ref|YP_002967812.1| ferredoxin [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195824|ref|YP_002969379.1| ferredoxin [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218813|gb|EDT89455.1| ferredoxin [Bifidobacterium animalis subsp. lactis HN019] gi|219620492|gb|ACL28649.1| ferredoxin [Bifidobacterium animalis subsp. lactis AD011] gi|240248810|gb|ACS45750.1| ferredoxin [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250378|gb|ACS47317.1| ferredoxin [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178141|gb|ADC85387.1| Ferredoxin [Bifidobacterium animalis subsp. lactis BB-12] gi|295793405|gb|ADG32940.1| ferredoxin [Bifidobacterium animalis subsp. lactis V9] Length = 107 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ + C+ K CV+ CPVDC YEG+ L I+P+EC+DCG CEP CP +AI + Sbjct: 1 MAYVIAQPCVDVKDKACVDECPVDCIYEGKRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 P E + E+ + ++ + + P V Sbjct: 61 LPPEWEWYKDAAVEFFAEVGDLGGAQAAGPIGKDPQRVAD 100 >gi|46205236|ref|ZP_00209759.1| COG1146: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 92 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 52/64 (81%), Positives = 56/64 (87%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +NCI CK+ DCVEVCPVDCFYEGEN L IHPDECIDCGVCEPECP +AIKPDTE LE W Sbjct: 1 DNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTEGNLESW 60 Query: 67 LKIN 70 LK+N Sbjct: 61 LKLN 64 >gi|311740712|ref|ZP_07714539.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] gi|311304232|gb|EFQ80308.1| ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] Length = 107 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDIMDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E WL N A + ++ + + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGSPGGA 85 >gi|19552328|ref|NP_600330.1| ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|62389992|ref|YP_225394.1| ferredoxin [Corynebacterium glutamicum ATCC 13032] gi|145295244|ref|YP_001138065.1| hypothetical protein cgR_1185 [Corynebacterium glutamicum R] gi|21323869|dbj|BAB98495.1| Ferredoxin 3 [Corynebacterium glutamicum ATCC 13032] gi|41325328|emb|CAF19808.1| FERREDOXIN [Corynebacterium glutamicum ATCC 13032] gi|140845164|dbj|BAF54163.1| hypothetical protein [Corynebacterium glutamicum R] Length = 105 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E WL N A + ++ + + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGSPGGA 85 >gi|320449419|ref|YP_004201515.1| ferredoxin-1 [Thermus scotoductus SA-01] gi|320149588|gb|ADW20966.1| ferredoxin-1 [Thermus scotoductus SA-01] Length = 79 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P D Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 + +++ N + A Sbjct: 61 VPEQWKSYIEKNRKLA 76 >gi|54026725|ref|YP_120967.1| putative ferredoxin [Nocardia farcinica IFM 10152] gi|54018233|dbj|BAD59603.1| putative ferredoxin [Nocardia farcinica IFM 10152] Length = 106 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M Y++ E C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI D Sbjct: 1 MPYIIAEPCVDVKDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 59 TEPGLELWLKINSEYATQ 76 T ++ N ++ + Sbjct: 61 TPDQWSGYVNANVDFFDE 78 >gi|227832808|ref|YP_002834515.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255324435|ref|ZP_05365552.1| ferredoxin [Corynebacterium tuberculostearicum SK141] gi|262182703|ref|ZP_06042124.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|227453824|gb|ACP32577.1| Ferredoxin [Corynebacterium aurimucosum ATCC 700975] gi|255298341|gb|EET77641.1| ferredoxin [Corynebacterium tuberculostearicum SK141] Length = 107 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRGCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E WL N A + ++ + + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGSPGGA 85 >gi|291294431|ref|YP_003505829.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus ruber DSM 1279] gi|290469390|gb|ADD26809.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus ruber DSM 1279] Length = 79 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K CVEVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVIVEPCIGTKDKSCVEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 59 TEPGLELWLKINSEYA 74 + ++ N + A Sbjct: 61 VPEQWQDYIAKNRKLA 76 >gi|269839181|ref|YP_003323873.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269790911|gb|ACZ43051.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 83 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 4/79 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+T CI K CVEVCPVDC Y ++ I+PDECIDCG CEPECPV AI P+ Sbjct: 1 MPYVITAPCIGVKDASCVEVCPVDCIYTDDDAPQYYINPDECIDCGACEPECPVSAIYPE 60 Query: 59 T--EPGLELWLKINSEYAT 75 + +++IN+EY Sbjct: 61 DSVPEQWQDFIRINAEYFQ 79 >gi|227487879|ref|ZP_03918195.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51867] gi|227542520|ref|ZP_03972569.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51866] gi|227092206|gb|EEI27518.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51867] gi|227181718|gb|EEI62690.1| possible ferredoxin [Corynebacterium glucuronolyticum ATCC 51866] Length = 107 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVKDKACVEECPVDCIYEGARSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 + + N+ + Sbjct: 61 VPDEWIDYNEANAAFFE 77 >gi|300933568|ref|ZP_07148824.1| Ferredoxin [Corynebacterium resistens DSM 45100] Length = 107 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 5/93 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 E W + N+ A + ++ S AAKM Sbjct: 61 IPDE-WEEYNAANAAFFDDL----GSPGGAAKM 88 >gi|295696289|ref|YP_003589527.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus tusciae DSM 2912] gi|295411891|gb|ADG06383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus tusciae DSM 2912] Length = 78 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +V+T CI K +CVEVCPVD +EGE+ I PD CIDCG CEP CPV AI + Sbjct: 1 MAFVITSPCIDEKAAECVEVCPVDAIHEGEDQYYIDPDTCIDCGACEPVCPVSAIYQEDF 60 Query: 60 -EPGLELWLKINSEYATQ 76 + +++ N ++ + Sbjct: 61 VPDDQKEFIQKNRDFFKK 78 >gi|218288758|ref|ZP_03493021.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241116|gb|EED08292.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 80 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MTYV+T CI K DCVEVCPVD ++G I P+ CIDCG CEP CPV AI + Sbjct: 2 MTYVITSPCIGEKAADCVEVCPVDAIHDGGATYLIDPERCIDCGACEPVCPVSAIFHEAS 61 Query: 59 TEPGLELWLKINSEYAT 75 W++IN + Sbjct: 62 VPDDERHWIEINRAFFQ 78 >gi|213964508|ref|ZP_03392708.1| ferredoxin [Corynebacterium amycolatum SK46] gi|213952701|gb|EEB64083.1| ferredoxin [Corynebacterium amycolatum SK46] Length = 107 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 ++ N ++ + Sbjct: 61 VPDEWVEFIDANVDWFDE 78 >gi|218294618|ref|ZP_03495472.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] gi|218244526|gb|EED11050.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] Length = 79 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P D Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 + +++ N + A Sbjct: 61 VPEQWKSYIEKNRKLA 76 >gi|111022909|ref|YP_705881.1| ferredoxin [Rhodococcus jostii RHA1] gi|226365417|ref|YP_002783200.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|110822439|gb|ABG97723.1| possible ferredoxin [Rhodococcus jostii RHA1] gi|226243907|dbj|BAH54255.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 107 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 9/98 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y + E C+ C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MPYTIAEPCVDVLDKACIEECPVDCIYEGGRMLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGV 96 + ++ N ++ S AAK+ V Sbjct: 61 VPDQWNGYIAANVDFFDDL-------GSPGGAAKLGKV 91 >gi|300858189|ref|YP_003783172.1| ferredoxin [Corynebacterium pseudotuberculosis FRC41] gi|300685643|gb|ADK28565.1| Ferredoxin [Corynebacterium pseudotuberculosis FRC41] gi|302205911|gb|ADL10253.1| ferredoxin [Corynebacterium pseudotuberculosis C231] gi|302330467|gb|ADL20661.1| ferredoxin [Corynebacterium pseudotuberculosis 1002] gi|308276146|gb|ADO26045.1| ferredoxin [Corynebacterium pseudotuberculosis I19] Length = 105 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E WL N A + ++ + + Sbjct: 61 VPDE-WLDYNDANAAFFDDLGSPGGA 85 >gi|46200111|ref|YP_005778.1| ferredoxin [Thermus thermophilus HB27] gi|55980146|ref|YP_143443.1| ferredoxin [Thermus thermophilus HB8] gi|62288089|sp|P03942|FER_THET8 RecName: Full=Ferredoxin gi|46197739|gb|AAS82151.1| ferredoxin [Thermus thermophilus HB27] gi|55771559|dbj|BAD70000.1| ferredoxin [Thermus thermophilus HB8] Length = 79 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P D Sbjct: 1 MPHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIYPEED 60 Query: 59 TEPGLELWLKINSEYA 74 + +++ N + A Sbjct: 61 VPEQWKSYIEKNRKLA 76 >gi|15609144|ref|NP_216523.1| ferredoxin FDXA [Mycobacterium tuberculosis H37Rv] gi|15841489|ref|NP_336526.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31793187|ref|NP_855680.1| ferredoxin FDXA [Mycobacterium bovis AF2122/97] gi|121637891|ref|YP_978114.1| putative ferredoxin fdxA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661821|ref|YP_001283344.1| ferredoxin FdxA [Mycobacterium tuberculosis H37Ra] gi|148823222|ref|YP_001287976.1| ferredoxin fdxA [Mycobacterium tuberculosis F11] gi|167970464|ref|ZP_02552741.1| ferredoxin fdxA [Mycobacterium tuberculosis H37Ra] gi|215404186|ref|ZP_03416367.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|215411702|ref|ZP_03420498.1| ferredoxin fdxA [Mycobacterium tuberculosis 94_M4241A] gi|215427368|ref|ZP_03425287.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|215430929|ref|ZP_03428848.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|215446220|ref|ZP_03432972.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|218753724|ref|ZP_03532520.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|219557969|ref|ZP_03537045.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|224990385|ref|YP_002645072.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253798941|ref|YP_003031942.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 1435] gi|254232177|ref|ZP_04925504.1| ferredoxin fdxA [Mycobacterium tuberculosis C] gi|254364826|ref|ZP_04980872.1| ferredoxin fdxA [Mycobacterium tuberculosis str. Haarlem] gi|254551030|ref|ZP_05141477.1| ferredoxin fdxA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186982|ref|ZP_05764456.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|260201110|ref|ZP_05768601.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|260205290|ref|ZP_05772781.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289443498|ref|ZP_06433242.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|289447624|ref|ZP_06437368.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|289554213|ref|ZP_06443423.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 605] gi|289570107|ref|ZP_06450334.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|289574683|ref|ZP_06454910.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289746045|ref|ZP_06505423.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|289750589|ref|ZP_06509967.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|289754113|ref|ZP_06513491.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|289758123|ref|ZP_06517501.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|289762161|ref|ZP_06521539.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|294996943|ref|ZP_06802634.1| ferredoxin fdxA [Mycobacterium tuberculosis 210] gi|297634582|ref|ZP_06952362.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 4207] gi|297731570|ref|ZP_06960688.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN R506] gi|298525509|ref|ZP_07012918.1| ferredoxin [Mycobacterium tuberculosis 94_M4241A] gi|306776244|ref|ZP_07414581.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu001] gi|306780027|ref|ZP_07418364.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu002] gi|306784775|ref|ZP_07423097.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu003] gi|306789133|ref|ZP_07427455.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu004] gi|306793467|ref|ZP_07431769.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu005] gi|306797851|ref|ZP_07436153.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu006] gi|306803731|ref|ZP_07440399.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu008] gi|306808305|ref|ZP_07444973.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu007] gi|306968129|ref|ZP_07480790.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu009] gi|306972354|ref|ZP_07485015.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu010] gi|307080063|ref|ZP_07489233.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu011] gi|307084638|ref|ZP_07493751.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu012] gi|313658903|ref|ZP_07815783.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN V2475] gi|54037088|sp|P64123|FER_MYCBO RecName: Full=Ferredoxin gi|54040765|sp|P64122|FER_MYCTU RecName: Full=Ferredoxin gi|1403446|emb|CAA98408.1| PROBABLE FERREDOXIN FDXA [Mycobacterium tuberculosis H37Rv] gi|13881731|gb|AAK46340.1| ferredoxin [Mycobacterium tuberculosis CDC1551] gi|31618779|emb|CAD96883.1| PROBABLE FERREDOXIN FDXA [Mycobacterium bovis AF2122/97] gi|121493538|emb|CAL72012.1| Probable ferredoxin fdxA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601236|gb|EAY60246.1| ferredoxin fdxA [Mycobacterium tuberculosis C] gi|134150340|gb|EBA42385.1| ferredoxin fdxA [Mycobacterium tuberculosis str. Haarlem] gi|148505973|gb|ABQ73782.1| ferredoxin FdxA [Mycobacterium tuberculosis H37Ra] gi|148721749|gb|ABR06374.1| ferredoxin fdxA [Mycobacterium tuberculosis F11] gi|224773498|dbj|BAH26304.1| putative ferredoxin [Mycobacterium bovis BCG str. Tokyo 172] gi|253320444|gb|ACT25047.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 1435] gi|289416417|gb|EFD13657.1| ferredoxin fdxA [Mycobacterium tuberculosis T46] gi|289420582|gb|EFD17783.1| ferredoxin fdxA [Mycobacterium tuberculosis CPHL_A] gi|289438845|gb|EFD21338.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 605] gi|289539114|gb|EFD43692.1| ferredoxin fdxA [Mycobacterium tuberculosis K85] gi|289543861|gb|EFD47509.1| ferredoxin fdxA [Mycobacterium tuberculosis T17] gi|289686573|gb|EFD54061.1| ferredoxin fdxA [Mycobacterium tuberculosis 02_1987] gi|289691176|gb|EFD58605.1| ferredoxin fdxA [Mycobacterium tuberculosis T92] gi|289694700|gb|EFD62129.1| ferredoxin fdxA [Mycobacterium tuberculosis EAS054] gi|289709667|gb|EFD73683.1| ferredoxin fdxA [Mycobacterium tuberculosis GM 1503] gi|289713687|gb|EFD77699.1| ferredoxin fdxA [Mycobacterium tuberculosis T85] gi|298495303|gb|EFI30597.1| ferredoxin [Mycobacterium tuberculosis 94_M4241A] gi|308215355|gb|EFO74754.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu001] gi|308327065|gb|EFP15916.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu002] gi|308330506|gb|EFP19357.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu003] gi|308334341|gb|EFP23192.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu004] gi|308338142|gb|EFP26993.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu005] gi|308341834|gb|EFP30685.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu006] gi|308345322|gb|EFP34173.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu007] gi|308349624|gb|EFP38475.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu008] gi|308354253|gb|EFP43104.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu009] gi|308358230|gb|EFP47081.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu010] gi|308362161|gb|EFP51012.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu011] gi|308365815|gb|EFP54666.1| ferredoxin fdxA [Mycobacterium tuberculosis SUMu012] gi|323719499|gb|EGB28626.1| ferredoxin fdxA [Mycobacterium tuberculosis CDC1551A] gi|326903619|gb|EGE50552.1| ferredoxin fdxA [Mycobacterium tuberculosis W-148] gi|328458696|gb|AEB04119.1| ferredoxin fdxA [Mycobacterium tuberculosis KZN 4207] Length = 114 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MTYV+ C+ CV+ CPVDC YEG L I+PDEC+DCG C+P C V+AI D Sbjct: 1 MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGD 60 Query: 59 TEPGLELWLKINSEYA-TQWPNITTKKESLPSAA 91 L N+ + P S AA Sbjct: 61 LPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAA 94 >gi|312141637|ref|YP_004008973.1| ferredoxin [Rhodococcus equi 103S] gi|325673105|ref|ZP_08152799.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|311890976|emb|CBH50295.1| ferredoxin [Rhodococcus equi 103S] gi|325556358|gb|EGD26026.1| ferredoxin [Rhodococcus equi ATCC 33707] Length = 106 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 49/94 (52%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ E CI C+E CPVDC YEGE L I+P+ECIDCG CE CPV+AI D + Sbjct: 1 MAFVIGEACIDYMDRSCMEECPVDCIYEGERKLYINPNECIDCGACELACPVEAITVDRK 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 E + P + AAK+D Sbjct: 61 ADPEFKEDAKRFFLEILPTRAEPVGNPGGAAKID 94 >gi|239981284|ref|ZP_04703808.1| putative ferredoxin reductase [Streptomyces albus J1074] gi|291453142|ref|ZP_06592532.1| ferredoxin-NADP+ reductase [Streptomyces albus J1074] gi|291356091|gb|EFE82993.1| ferredoxin-NADP+ reductase [Streptomyces albus J1074] Length = 535 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 12/80 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTY +T+ C C CV VCPV+C + L I P CIDCG C CPV Sbjct: 1 MTYAITQTC--CNDATCVAVCPVNCIHPTPEERAFGSTEMLHIDPRSCIDCGACADACPV 58 Query: 53 DAIKPDT--EPGLELWLKIN 70 DAI P +P + +N Sbjct: 59 DAIFPVDRLKPAHREYAALN 78 >gi|227503767|ref|ZP_03933816.1| ferredoxin [Corynebacterium striatum ATCC 6940] gi|227199591|gb|EEI79639.1| ferredoxin [Corynebacterium striatum ATCC 6940] Length = 107 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E W+ N A + ++ + + Sbjct: 61 VPDE-WIDYNDANAAFFDDLGSPGGA 85 >gi|116329640|ref|YP_799359.1| hypothetical protein LBL_4106 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332526|ref|YP_802243.1| hypothetical protein LBJ_4090 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122533|gb|ABJ80426.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116127393|gb|ABJ77485.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 99 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 43/89 (48%), Positives = 49/89 (55%), Gaps = 2/89 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVTE C CK+T C VCPV+ F EG + L I P CIDC C PECPV+AI PD E Sbjct: 1 MAYVVTEPCRNCKYTYCAAVCPVEAFREGADCLYIEPTVCIDCNKCRPECPVEAIYPDYE 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESL 87 W+ N A +P I K L Sbjct: 61 VPSIWRDWVAENVHKAKHFPVIIDVKVPL 89 >gi|227874543|ref|ZP_03992706.1| possible ferredoxin [Mobiluncus mulieris ATCC 35243] gi|269977657|ref|ZP_06184624.1| ferredoxin [Mobiluncus mulieris 28-1] gi|306817830|ref|ZP_07451569.1| ferredoxin [Mobiluncus mulieris ATCC 35239] gi|307701395|ref|ZP_07638415.1| ferredoxin [Mobiluncus mulieris FB024-16] gi|227844752|gb|EEJ54898.1| possible ferredoxin [Mobiluncus mulieris ATCC 35243] gi|269934260|gb|EEZ90827.1| ferredoxin [Mobiluncus mulieris 28-1] gi|304649309|gb|EFM46595.1| ferredoxin [Mobiluncus mulieris ATCC 35239] gi|307613410|gb|EFN92659.1| ferredoxin [Mobiluncus mulieris FB024-16] Length = 106 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ + C+ K CV+ CPVDC YEG L I+P EC+DCG CE CP +AI + Sbjct: 1 MTYVIAQPCVDVKDRACVDECPVDCIYEGARTLYINPLECVDCGACEAVCPTEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 E +L+ N ++ + A+ V K + + P Sbjct: 61 LPAEWEDYLRANRDFFDD-------IGTPGGASSYGPV-DKDDPMIAALP 102 >gi|296393262|ref|YP_003658146.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Segniliparus rotundus DSM 44985] gi|296180409|gb|ADG97315.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Segniliparus rotundus DSM 44985] Length = 112 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VV E C+ CVE CPVDC Y G+ + I+PD CIDCG CE CPV+AI D Sbjct: 1 MAFVVAEPCVDVIDRSCVEECPVDCMYLGKRMVYINPDLCIDCGACESVCPVEAIYNEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 + + N+++ + + +A+++ G + Y + P Sbjct: 61 LPDEWSAFKEANAQFFEGVEGLPEPGSCVGNASEL-GELGRDAPYVAALPA 110 >gi|300781508|ref|ZP_07091362.1| ferredoxin [Corynebacterium genitalium ATCC 33030] gi|300533215|gb|EFK54276.1| ferredoxin [Corynebacterium genitalium ATCC 33030] Length = 107 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDLLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N + + Sbjct: 61 LPEEWNDYYDANVAFFDE 78 >gi|207724517|ref|YP_002254914.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum MolK2] gi|207739155|ref|YP_002257548.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum IPO1609] gi|206589739|emb|CAQ36700.1| ferredoxin protein 3fe-4s [Ralstonia solanacearum MolK2] gi|206592528|emb|CAQ59434.1| probable ferredoxin protein 3fe-4s [Ralstonia solanacearum IPO1609] Length = 96 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 5/95 (5%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLELWLKINSEYATQ--WP 78 +DCF+ G NFL I PD CIDC +C PECPV AI D ++ +N++ + + WP Sbjct: 1 MDCFHAGPNFLVIDPDACIDCSICAPECPVGAIYAEADVPADQREFIALNAQLSRRPDWP 60 Query: 79 NITTKKESLPSAAKMDGVKQKY-EKYFSPNPGGKN 112 +T + L A+ VK K +P PG + Sbjct: 61 RLTQVQPPLADHARWAQVKDKRSTLLIAPEPGTQT 95 >gi|108805583|ref|YP_645520.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108766826|gb|ABG05708.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 79 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+TE CI K CVEVCPVDC Y+G I+P+ECIDCG CEPECPV+AI P+ E Sbjct: 1 MTYVITEPCIGTKDQSCVEVCPVDCIYDGGEHFMINPEECIDCGACEPECPVEAIYPEDE 60 Query: 61 --PGLELWLKINSEYA 74 ++ ++ E+ Sbjct: 61 VPEDMQQYITKAQEFF 76 >gi|294811298|ref|ZP_06769941.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|326439851|ref|ZP_08214585.1| ferredoxin [Streptomyces clavuligerus ATCC 27064] gi|294323897|gb|EFG05540.1| Ferredoxin [Streptomyces clavuligerus ATCC 27064] Length = 108 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 43/65 (66%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+AI + E Sbjct: 1 MAYVIAQPCVDVKDRACIEECPVDCIYEGPRKLYIHPDECVDCGACEPVCPVEAIFYEDE 60 Query: 61 PGLEL 65 +E Sbjct: 61 VPVEW 65 >gi|311900686|dbj|BAJ33094.1| putative 7Fe ferredoxin [Kitasatospora setae KM-6054] Length = 104 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYVV C+ K C E CPVD YEG L IHPDECIDCG CE CPV+AI + Sbjct: 1 MTYVVALPCVDVKDRACTEECPVDGIYEGPRMLYIHPDECIDCGACEVVCPVEAIHYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 L + N+E+ + Sbjct: 61 LPAELRPFAAANAEFCAE 78 >gi|262203210|ref|YP_003274418.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086557|gb|ACY22525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 108 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ E C+ CVE CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAEPCVDVMDKACVEECPVDCIYEGGRALYIQPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E ++ N+++ + Sbjct: 61 VPDEWEPYVSANADFFDE 78 >gi|297623880|ref|YP_003705314.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Truepera radiovictrix DSM 17093] gi|297165060|gb|ADI14771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Truepera radiovictrix DSM 17093] Length = 78 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +++TE CI K CV+VCPV+C YE E+ L IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHIITEPCIGVKDKSCVDVCPVECIYEAEDQLYIHPDECIDCGACVPACPVSAIYPEED 60 Query: 59 TEPGLELWLKINSEYA 74 +++ N + A Sbjct: 61 VPSEWASYIQKNYDLA 76 >gi|311742320|ref|ZP_07716129.1| ferredoxin--NADP(+) reductase C-terminal domain protein [Aeromicrobium marinum DSM 15272] gi|311313948|gb|EFQ83856.1| ferredoxin--NADP(+) reductase C-terminal domain protein [Aeromicrobium marinum DSM 15272] Length = 559 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 12/83 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +VVT +C C C CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVVTRSC--CADASCTFACPVNCIHPTPDEPDFGTAEMLYIDPVSCVDCGACVRACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEY 73 AI P T+ G +L+IN+ + Sbjct: 59 GAIVPHTKLGEHELPFLEINAAF 81 >gi|172040342|ref|YP_001800056.1| hypothetical protein cur_0662 [Corynebacterium urealyticum DSM 7109] gi|171851646|emb|CAQ04622.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 105 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + + C+ CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+A+ + Sbjct: 1 MTYTIAQPCVDVLDRSCVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAVFYEDD 60 Query: 60 -EPGLELWLKINSEYAT 75 E + N+ + Sbjct: 61 IPEEWEEYNDANAAFFD 77 >gi|86743147|ref|YP_483547.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86570009|gb|ABD13818.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 111 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 MT+VV CI K T CVE CPVDC YEG L I+PDECIDCG C CPVDAIK Sbjct: 1 MTFVVLSPCIDVKDTACVEECPVDCIYEGSRKLYINPDECIDCGACASVCPVDAIKSTRI 60 Query: 59 TEPGLELWLKINSEYAT-QWPNITTKKESLPSAAK 92 ++ + + T P + A K Sbjct: 61 VPASEAEFIADEARFFTDILPGRDAPIGNPGGAGK 95 >gi|94984884|ref|YP_604248.1| 4Fe-4S ferredoxin, iron-sulfur binding [Deinococcus geothermalis DSM 11300] gi|94555165|gb|ABF45079.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Deinococcus geothermalis DSM 11300] Length = 78 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 G E ++ N + Sbjct: 61 VPAGEEEFIFKNRAFF 76 >gi|151568126|pdb|2V2K|A Chain A, The Crystal Structure Of Fdxa, A 7fe Ferredoxin From Mycobacterium Smegmatis gi|151568127|pdb|2V2K|B Chain B, The Crystal Structure Of Fdxa, A 7fe Ferredoxin From Mycobacterium Smegmatis Length = 105 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 9/112 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 TYV+ E C+ K C+E CPVDC YEG L IHPDEC+D G CEP CPV+AI + Sbjct: 1 TYVIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDXGACEPVCPVEAIYYEDDV 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + + N+++ + S A+K+ + P G+ Sbjct: 61 PDQWSSYAQANADFFAEL-------GSPGGASKVGQTDNDPQAIKDLPPQGE 105 >gi|116255229|ref|YP_771062.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] gi|115259877|emb|CAK02971.1| putative ferredoxin [Rhizobium leguminosarum bv. viciae 3841] Length = 108 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T+ CI K DC CPVDC YEG IHP ECI+CG+C CPVDAI D E Sbjct: 1 MAYVITDPCIDVKDGDCTVACPVDCIYEGGRMFYIHPGECINCGLCLSVCPVDAISWDEE 60 Query: 61 PGLE--LWLKINSEYA 74 + +N ++ Sbjct: 61 IPQSRVQFKAVNQDFF 76 >gi|331697480|ref|YP_004333719.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952169|gb|AEA25866.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 114 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPD 58 MTY++ E C+ CV+VCPVDC Y+G L I+P ECI+CG CEPECPVDAI + + Sbjct: 1 MTYIIAEPCVDLMDRSCVDVCPVDCIYQGGRKLYINPGECIECGACEPECPVDAIVLEQE 60 Query: 59 TEPGLELWLKINSEYA-TQWPNITTKKESLPSAAKMDGV 96 L N+ + P A V Sbjct: 61 LTDEERPHLADNAAFFYETLPGRDAPLGEPGGAGAFGPV 99 >gi|237785229|ref|YP_002905934.1| Ferredoxin [Corynebacterium kroppenstedtii DSM 44385] gi|237758141|gb|ACR17391.1| Ferredoxin [Corynebacterium kroppenstedtii DSM 44385] Length = 105 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y + E C+ K CVE CPVDC YEG L IHPDEC+DCG CEP CPV+AI + + Sbjct: 1 MAYTIAEPCVDVKDKACVEECPVDCIYEGVRSLYIHPDECVDCGACEPVCPVEAIFYEDD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES 86 E W+ N A + ++ + + Sbjct: 61 VPDE-WIDYNDANAAFFDDLGSPGGA 85 >gi|6729719|pdb|1BQX|A Chain A, Artificial Fe8s8 Ferredoxin: The D13c Variant Of Bacillus Schlegelii Fe7s8 Ferredoxin gi|6729750|pdb|1BWE|A Chain A, Artificial Fe8s8 Ferredoxin: The D13c Variant Of Bacillus Schlegelii Fe7s8 Ferredoxin Length = 77 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-- 59 YV+TE CI K CVEVCPVDC +EGE+ I PD CIDCG CE CPV AI + Sbjct: 1 AYVITEPCIGTKCASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFV 60 Query: 60 EPGLELWLKINSEYATQ 76 + +++ N ++ + Sbjct: 61 PEEWKSYIQKNRDFFKK 77 >gi|260905761|ref|ZP_05914083.1| N-succinyldiaminopimelate aminotransferase [Brevibacterium linens BL2] Length = 108 Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY++ + C+ K C++ CPVDC YEG L IHP+EC+DCG CEP CPV+AI + Sbjct: 1 MTYIIAQPCVDLKDRACIDECPVDCIYEGSRSLYIHPEECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 E + N ++ Sbjct: 61 VPDEWEAYYSANVDFFDT 78 >gi|159896706|ref|YP_001542953.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889745|gb|ABX02825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 77 Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ E C+ K + CV+VCPVDC YEGE+ I+PDECIDCG CEPECPV AI Sbjct: 1 MAYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDS 60 Query: 60 -EPGLELWLKINSEYA 74 + + N ++ Sbjct: 61 VPEQWASYTQKNVDFF 76 >gi|290960677|ref|YP_003491859.1| ferredoxin [Streptomyces scabiei 87.22] gi|260650203|emb|CBG73319.1| ferredoxin [Streptomyces scabiei 87.22] Length = 103 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYV+ + C+ K C++ CPVDC YEG L I PDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIAQPCVDVKDRACIDECPVDCIYEGPRKLYIQPDECVDCGACEPVCPVEAIFFEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 + ++E + + P A Sbjct: 61 VPAEWSGYRSADAEVFAGLGSPGGASAAGPLAED 94 >gi|317122344|ref|YP_004102347.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter marianensis DSM 12885] gi|315592324|gb|ADU51620.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter marianensis DSM 12885] Length = 78 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K C EVCPVDC YEGE+ L I+PDECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGVKDKSCQEVCPVDCIYEGEDQLYINPDECIGCSACAAVCPVEAIYDEDE 60 Query: 61 --PGLELWLKINSEYATQ 76 + +++ N ++ Q Sbjct: 61 VPEQWKHYIEKNRKFFEQ 78 >gi|320335830|ref|YP_004172541.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757119|gb|ADV68876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 78 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFYIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 +++ N + Sbjct: 61 VPGDQVPFIEKNRAHF 76 >gi|315442042|ref|YP_004074921.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315260345|gb|ADT97086.1| ferredoxin [Mycobacterium sp. Spyr1] Length = 117 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query: 61 PGLEL--WLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNPGG 110 E +L N+ + T ++ + E L P A G + P Sbjct: 61 LPDEELAFLDDNAAFFTT--TLSGRDEPLGDPGGAAKLGRVGADTPLVAALPAS 112 >gi|289756971|ref|ZP_06516349.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] gi|289712535|gb|EFD76547.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] Length = 179 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M +V+T++C C CV CPV+C + + L I P C+DCG C CPV Sbjct: 1 MPHVITQSC--CNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPNI-----TTKKESLPSAAK 92 AI P+T E +++IN+ Y + P T+K + AA+ Sbjct: 59 SAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAE 105 >gi|29828838|ref|NP_823472.1| ferredoxin [Streptomyces avermitilis MA-4680] gi|29605943|dbj|BAC70007.1| putative ferredoxin [Streptomyces avermitilis MA-4680] Length = 108 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYV+ C+ K CV CPVDC YEG L I PDEC+DCG CEP CPV+AI D Sbjct: 1 MTYVIALPCVDVKDRSCVGECPVDCIYEGRRALYIQPDECVDCGACEPVCPVEAIYFEDD 60 Query: 59 TEPGLELWLKINSEYAT 75 N+++ Sbjct: 61 VPAEWGDHRGSNADFFD 77 >gi|331699698|ref|YP_004335937.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954387|gb|AEA28084.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 112 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+YV+ +C+ CV+ CPVDC Y G ++P ECIDCG CEP CPV+AI P+++ Sbjct: 1 MSYVIGASCVDVTDRACVDECPVDCIYVGGRMAYVNPTECIDCGACEPVCPVEAIVPESD 60 Query: 61 --PGLELWLKINSEYA-TQWPNITTKKESLPSAAKMDGV 96 + ++ N+ + P + A ++ V Sbjct: 61 VAESEQDFIAANAAFFLEVLPGRDEPLGNPGGAGQVGEV 99 >gi|298242651|ref|ZP_06966458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297555705|gb|EFH89569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 87 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ CI + CV+VCPVDC + E L I+PDECIDCG CEP CPV Sbjct: 1 MAYVITQPCIGVRDASCVDVCPVDCIHPSSNEPGYEEAEQLFINPDECIDCGACEPACPV 60 Query: 53 DAIKPD--TEPGLELWLKINSEYA 74 AI + + ++KIN+E+ Sbjct: 61 TAIFEESAVPDEWKSYIKINAEFF 84 >gi|320012828|gb|ADW07678.1| ferredoxin [Streptomyces flavogriseus ATCC 33331] Length = 107 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 43/64 (67%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ + C+ K C+E CPVDC YEG L IHPDEC+DCG CEP CPV+A+ + + Sbjct: 1 MTYVIAQPCVDIKDKACIEECPVDCIYEGPRKLYIHPDECVDCGACEPVCPVEAVFYEDD 60 Query: 61 PGLE 64 E Sbjct: 61 LPAE 64 >gi|108799685|ref|YP_639882.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119868795|ref|YP_938747.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. KMS] gi|126435329|ref|YP_001071020.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium sp. JLS] gi|108770104|gb|ABG08826.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] gi|119694884|gb|ABL91957.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] gi|126235129|gb|ABN98529.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 114 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTYV+ C+ CV CPVDC YEG+ + I+PDEC+DCG C C +DAI +T Sbjct: 1 MTYVIGSACVDVVDKSCVPECPVDCIYEGDRVMYINPDECVDCGACRVICKMDAIFYETD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLP 88 + L N+ + T+ + + L Sbjct: 61 LPEDQQRHLADNAAFFTE--VLPGRDAPLG 88 >gi|324997878|ref|ZP_08118990.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia sp. P1] Length = 104 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 2/94 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M YVVTE CI + C+E CPVDC Y G+ + IHPDEC+DCG C P CP +AI + Sbjct: 1 MAYVVTEACIDVQDRACMEECPVDCIYPGDRMMYIHPDECVDCGKCMPACPSEAIHWEYK 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 +++ N+ + +++ P Sbjct: 61 VPAEQAAFVEANAVFVRSHGLTGGGEDADPVGED 94 >gi|170782509|ref|YP_001710842.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] gi|169157078|emb|CAQ02253.1| ferredoxin [Clavibacter michiganensis subsp. sepedonicus] Length = 108 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT V+ C+ K C++ CPVDC YEGE L IHPDEC+DCG CEP CPV+AI + Sbjct: 1 MTCVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD 60 Query: 60 -EPGLELWLKINSEYATQ 76 + N E+ + Sbjct: 61 LPEKWSDYYTANVEFFAE 78 >gi|183982996|ref|YP_001851287.1| ferredoxin FdxA_2 [Mycobacterium marinum M] gi|183176322|gb|ACC41432.1| ferredoxin FdxA_2 [Mycobacterium marinum M] Length = 114 Score = 99.8 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MTYV+ C+ C + CPVDC YEG + I+PDEC+DCG C+ C V AI D Sbjct: 1 MTYVIGRECVDVAEKSCTQECPVDCIYEGARTMYINPDECVDCGACKTTCRVGAIYWEED 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNPGGK 111 L N+ + + + + L P A G + P Sbjct: 61 LPDEQRHHLADNAAFFRE--ILPGRDAPLGSPGGADTVGRIGVDTPLIAAMPPSG 113 >gi|94986311|ref|YP_605675.1| 4Fe-4S ferredoxin, iron-sulfur binding [Deinococcus geothermalis DSM 11300] gi|94556592|gb|ABF46506.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Deinococcus geothermalis DSM 11300] Length = 78 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 G E + N + Sbjct: 61 VPAGEEEFTLKNRAFF 76 >gi|168700895|ref|ZP_02733172.1| ferredoxin [Gemmata obscuriglobus UQM 2246] Length = 92 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +VVT C+ C++TDCV VCP++CFY E L I PD+CIDCG C PECPV+AI D Sbjct: 1 MAHVVTAPCVGCRYTDCVVVCPMECFYGDERQLYIDPDDCIDCGACAPECPVEAIFLDGD 60 Query: 59 TEPGLELWLKINSEYATQWPNITTK 83 ++ +N++ + + Sbjct: 61 VPAKWSDFVPLNADRVKALKPLGAR 85 >gi|296138878|ref|YP_003646121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] gi|296027012|gb|ADG77782.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Tsukamurella paurometabola DSM 20162] Length = 108 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 10/110 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MTY + E C+ C+E CPVDC YEG L I PDEC+DCG CEP CPV+AI + Sbjct: 1 MTYTIAEPCVDVLDKACIEECPVDCIYEGNRMLYIQPDECVDCGACEPVCPVEAIFYEDD 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 ++ N ++ + P A G + P Sbjct: 61 VPDEWSEYVTANIDFFNE--------VGSPGGAAKTGKIDYDHPFIKALP 102 >gi|315226089|ref|ZP_07867877.1| ferredoxin [Parascardovia denticolens DSM 10105] gi|315120221|gb|EFT83353.1| ferredoxin [Parascardovia denticolens DSM 10105] Length = 119 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K CV+ CPVDC YE L I+P+EC+DCG CEP CP +AI + + Sbjct: 12 MAYVIAEPCVDVKDKACVDECPVDCIYEAPRTLYINPNECVDCGACEPVCPTEAIFYEDD 71 Query: 61 -PGLELWLKINSE 72 P +W K +E Sbjct: 72 LPDEWVWYKDAAE 84 >gi|119960623|ref|YP_946862.1| ferredoxin [Arthrobacter aurescens TC1] gi|119947482|gb|ABM06393.1| ferredoxin [Arthrobacter aurescens TC1] Length = 106 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M+YV+ + C+ K C++ CPVDC YEG+ L IHP EC+DCG C+P CPV+AI D Sbjct: 1 MSYVIAQPCVDVKDRACIQECPVDCIYEGDRSLYIHPSECVDCGACDPVCPVEAIYYADD 60 Query: 59 TEPGLELWLKINSEYATQ 76 ++ + E+ + Sbjct: 61 VPDEWADYVMASVEFFEE 78 >gi|218288541|ref|ZP_03492818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|258511869|ref|YP_003185303.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241198|gb|EED08373.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius LAA1] gi|257478595|gb|ACV58914.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 79 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M +V+T CI K DCVE CPVD +EG + I PD CIDC CEP CPV+AI + Sbjct: 1 MPFVITSPCIGEKAADCVETCPVDAIHEGPDQYYIDPDLCIDCAACEPVCPVNAIYQEEF 60 Query: 59 TEPGLELWLKINSEYAT 75 + +++ N + Sbjct: 61 VPEDEKEFIEKNRNFFR 77 >gi|120401325|ref|YP_951154.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954143|gb|ABM11148.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium vanbaalenii PYR-1] Length = 117 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MTYV+ C+ CV+ CP DC YEG+ + I+P+EC+DCG C C VDAI +T+ Sbjct: 1 MTYVIGSACVDIVDKSCVQECPADCIYEGDRAMYINPNECVDCGACRIACRVDAIYYETD 60 Query: 61 PGLE--LWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNP 108 E +L+ N+ + T + + L P A G + P Sbjct: 61 LPDEEMEFLEDNAAFFT--MTLAGRDAPLGDPGGAAKVGRVGADTPLVAALP 110 >gi|17942775|pdb|1H98|A Chain A, New Insights Into Thermostability Of Bacterial Ferredoxins: High Resolution Crystal Structure Of The Seven-Iron Ferredoxin From Thermus Thermophilus Length = 78 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DT 59 +V+ E CI K CVEVCPV+C Y+G + IHP+ECIDCG C P CPV+AI P D Sbjct: 1 PHVICEPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECIDCGACVPACPVNAIYPEEDV 60 Query: 60 EPGLELWLKINSEYA 74 + +++ N + A Sbjct: 61 PEQWKSYIEKNRKLA 75 >gi|218507913|ref|ZP_03505791.1| ferredoxin III protein [Rhizobium etli Brasil 5] Length = 59 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 52/59 (88%), Positives = 55/59 (93%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 MTYVVT+NCI CK+TDCVEVCPVDCFYEGENFL IHPDECIDCGVCEPE P +AIKPDT Sbjct: 1 MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENFLVIHPDECIDCGVCEPESPAEAIKPDT 59 >gi|325284128|ref|YP_004256669.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] gi|324315937|gb|ADY27052.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] Length = 78 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T CI K C EVCPV+C Y+G + IHPDECIDCG C P CPV+AI P D Sbjct: 1 MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFLIHPDECIDCGACVPACPVNAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 ++ N+ + Sbjct: 61 VPADETPFIAKNAAFF 76 >gi|111024041|ref|YP_707013.1| ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] gi|110823571|gb|ABG98855.1| probable ferredoxin--NADP(+) reductase [Rhodococcus jostii RHA1] Length = 467 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 12/95 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 MT+VV +C CK CV VCP +C + L I P CIDC C CP Sbjct: 1 MTHVVLGHC--CKDASCVRVCPQNCIHPAPGEAGFESAETLFIDPRSCIDCTACVEACPA 58 Query: 53 DAIKPDTEP--GLELWLKINSEYATQWPNITTKKE 85 AIKP+ + N+EY Q P + + Sbjct: 59 SAIKPEWTLTITERPYAARNAEYFEQTPAKSRPRA 93 >gi|313902860|ref|ZP_07836256.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter subterraneus DSM 13965] gi|313466795|gb|EFR62313.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermaerobacter subterraneus DSM 13965] Length = 78 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K C EVCPVDC YEG++ L I+P+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGVKDKSCQEVCPVDCIYEGDDQLYINPEECIGCSACAAVCPVEAIYDEDE 60 Query: 61 --PGLELWLKINSEYATQ 76 + +++ N ++ Q Sbjct: 61 VPEQWKSYIEKNRKFFEQ 78 >gi|221633402|ref|YP_002522627.1| hypothetical protein trd_1422 [Thermomicrobium roseum DSM 5159] gi|221155410|gb|ACM04537.1| conserved domain protein [Thermomicrobium roseum DSM 5159] Length = 83 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 37/80 (46%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 MTYV+ E CI K CVEVCPVDC I+PDECIDCGVC CPV+AI + Sbjct: 1 MTYVIAEPCIGVKDASCVEVCPVDCIKSDPEAEQYFINPDECIDCGVCAEVCPVEAIYFE 60 Query: 59 T--EPGLELWLKINSEYATQ 76 +L+ N EY + Sbjct: 61 DDLPEQWRHYLQKNREYFQK 80 >gi|229818391|ref|ZP_04448672.1| hypothetical protein BIFANG_03696 [Bifidobacterium angulatum DSM 20098] gi|229784261|gb|EEP20375.1| hypothetical protein BIFANG_03696 [Bifidobacterium angulatum DSM 20098] Length = 111 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 7 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 66 Query: 61 -PGLELWLKINS 71 P W K + Sbjct: 67 LPDEWAWYKDAA 78 >gi|158318597|ref|YP_001511105.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|4325127|gb|AAD17275.1| ferredoxin I [Frankia sp. EuIK1] gi|158114002|gb|ABW16199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 113 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 6/114 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVVT CI K T C++ CPVD YEG+ L I+P+EC +CG C CP+ AI D E Sbjct: 1 MPYVVTSPCIDVKDTACLDECPVDAIYEGDRKLYINPNECTECGACASACPIGAIMLDLE 60 Query: 61 PG--LELWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNPGG 110 ++K E+ T+ + + E L P AK G + + + Sbjct: 61 VPKAERPFVKSEKEFFTK--VLPGRDEPLGDPGGAKTVGKIKADTPFVAEYEAS 112 >gi|269836661|ref|YP_003318889.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785924|gb|ACZ38067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 80 Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 MTYV+ E CI K CVEVCPVDC + + I PDECIDCGVC CPV+AI + Sbjct: 1 MTYVIAEPCIGVKDASCVEVCPVDCIHSDDEAEQYYIDPDECIDCGVCAEVCPVEAIFFE 60 Query: 59 T--EPGLELWLKINSEYATQ 76 +L+IN EY + Sbjct: 61 DDLPEQWADFLRINREYFQK 80 >gi|226349641|ref|YP_002776755.1| 7Fe ferredoxin [Rhodococcus opacus B4] gi|226245556|dbj|BAH55903.1| 7Fe ferredoxin [Rhodococcus opacus B4] Length = 104 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ E C+ C+E CPVDC YEG L IH +ECIDCG CEP CPV AI+P Sbjct: 1 MAFVIGEPCVDVMDKSCIEECPVDCIYEGGRMLYIHQNECIDCGACEPVCPVSAIRPAQK 60 Query: 59 TEPGLELWLKINSE 72 + + + + + E Sbjct: 61 VDEQWQPFQESSRE 74 >gi|294790482|ref|ZP_06755640.1| ferredoxin [Scardovia inopinata F0304] gi|294458379|gb|EFG26732.1| ferredoxin [Scardovia inopinata F0304] Length = 111 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K CVE CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MAYVIAEPCVDVKDKACVEECPVDCIYEGPRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 -PGLELWLKINS 71 P W K + Sbjct: 61 LPDDWAWYKDAA 72 >gi|312138771|ref|YP_004006107.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|311888110|emb|CBH47422.1| putative ferredoxin domain oxidoreductase [Rhodococcus equi 103S] Length = 470 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 M +V+ +C CK CV VCP +C + L I PD CIDC C CP Sbjct: 1 MAHVILGHC--CKDASCVRVCPQNCIHPAPGEDGFASTETLYIDPDSCIDCTACVDACPA 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESL 87 A+K + P + N E+ Q P T + L Sbjct: 59 SAVKSEHALTPAELPYAARNREFFAQAPAATRTRSRL 95 >gi|310288040|ref|YP_003939299.1| Ferredoxin [Bifidobacterium bifidum S17] gi|309251977|gb|ADO53725.1| Ferredoxin [Bifidobacterium bifidum S17] Length = 107 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 -PGLELWLKINS 71 P W K + Sbjct: 61 LPDEWAWYKDAA 72 >gi|224283694|ref|ZP_03647016.1| Ferredoxin [Bifidobacterium bifidum NCIMB 41171] gi|311064916|ref|YP_003971642.1| ferredoxin [Bifidobacterium bifidum PRL2010] gi|313140850|ref|ZP_07803043.1| ferredoxin [Bifidobacterium bifidum NCIMB 41171] gi|310867236|gb|ADP36605.1| FdxC Ferredoxin [Bifidobacterium bifidum PRL2010] gi|313133360|gb|EFR50977.1| ferredoxin [Bifidobacterium bifidum NCIMB 41171] Length = 107 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 -PGLELWLKINS 71 P W K + Sbjct: 61 LPDEWAWYKDAA 72 >gi|229488683|ref|ZP_04382549.1| NADPH-ferredoxin reductase fpra [Rhodococcus erythropolis SK121] gi|229324187|gb|EEN89942.1| NADPH-ferredoxin reductase fpra [Rhodococcus erythropolis SK121] Length = 543 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEY 73 +C+ P + + L I PD CIDCG C ECPV+AI PD E +L++N+ Y Sbjct: 5 NCIHPTPDEAPFATTEMLYIDPDTCIDCGACVDECPVEAIFPDNELDEDDAPYLQMNASY 64 Query: 74 ATQWP 78 + P Sbjct: 65 FEKHP 69 >gi|255744608|ref|ZP_05418559.1| ferredoxin [Vibrio cholera CIRS 101] gi|261212100|ref|ZP_05926386.1| ferredoxin [Vibrio sp. RC341] gi|262161260|ref|ZP_06030371.1| ferredoxin [Vibrio cholerae INDRE 91/1] gi|262192462|ref|ZP_06050613.1| ferredoxin [Vibrio cholerae CT 5369-93] gi|255737639|gb|EET93033.1| ferredoxin [Vibrio cholera CIRS 101] gi|260838708|gb|EEX65359.1| ferredoxin [Vibrio sp. RC341] gi|262029010|gb|EEY47663.1| ferredoxin [Vibrio cholerae INDRE 91/1] gi|262031621|gb|EEY50208.1| ferredoxin [Vibrio cholerae CT 5369-93] Length = 75 Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C PEC AI + E +++++N+E A WPN+T K ++ A Sbjct: 1 MVINPIECIDCGLCVPECTAQAIFQEDELVGDQRIFIELNAELAEHWPNLTEVKPAMEDA 60 Query: 91 AKMDGVKQKYEKY 103 AK DGV K + Sbjct: 61 AKWDGVPNKLDML 73 >gi|324997613|ref|ZP_08118725.1| ferredoxin--NADP+ reductase [Pseudonocardia sp. P1] Length = 498 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 12/89 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV CPV+C + + L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CTDASCVAACPVNCIHPTPDEPDYTTTDMLYIDPRACIDCGACADACPV 58 Query: 53 DAIKPDTEPGLEL--WLKINSEYATQWPN 79 DA+ P L + +N+ Y P Sbjct: 59 DAVFPVERLSASLAGYADVNAAYYDGKPV 87 >gi|325676533|ref|ZP_08156211.1| ferredoxin--NADP(+) reductase [Rhodococcus equi ATCC 33707] gi|325552711|gb|EGD22395.1| ferredoxin--NADP(+) reductase [Rhodococcus equi ATCC 33707] Length = 470 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 12/97 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 M +V+ +C CK CV VCP +C + L I PD CIDC C CP Sbjct: 1 MAHVILGHC--CKDASCVRVCPQNCIHPAPGEDGFASTETLYIDPDSCIDCTACVDACPA 58 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKESL 87 A+K + P + N E+ Q P T + L Sbjct: 59 SAVKSEHALTPAELPYAARNREFFAQAPAATRTRSRL 95 >gi|291457166|ref|ZP_06596556.1| ferredoxin [Bifidobacterium breve DSM 20213] gi|291381001|gb|EFE88519.1| ferredoxin [Bifidobacterium breve DSM 20213] Length = 106 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|288918987|ref|ZP_06413329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288349633|gb|EFC83868.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 113 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M YVVT CI K C++ CPVD YEG L I+P+EC +CG C CP+ AI D Sbjct: 1 MPYVVTSPCIDVKDGACLDECPVDAIYEGARKLYINPNECTECGACASACPIGAIMLDLE 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSP 106 ++K + E+ ++ + + E L P AK G + + Sbjct: 61 VPKPERPFVKTDKEFFSK--ALPGRDEPLGDPGGAKAAGKIGVDTPFVAE 108 >gi|23466115|ref|NP_696718.1| ferredoxin [Bifidobacterium longum NCC2705] gi|189440546|ref|YP_001955627.1| Ferredoxin [Bifidobacterium longum DJO10A] gi|227546453|ref|ZP_03976502.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239620993|ref|ZP_04664024.1| ferredoxin [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454888|ref|YP_003662032.1| 4Fe-4S ferredoxin, iron-sulfur-binding domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|312133853|ref|YP_004001192.1| ferredoxin [Bifidobacterium longum subsp. longum BBMN68] gi|317483015|ref|ZP_07942017.1| 4Fe-4S binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322689945|ref|YP_004209679.1| ferredoxin [Bifidobacterium longum subsp. infantis 157F] gi|322691886|ref|YP_004221456.1| ferredoxin [Bifidobacterium longum subsp. longum JCM 1217] gi|23326849|gb|AAN25354.1| ferredoxin [Bifidobacterium longum NCC2705] gi|189428981|gb|ACD99129.1| Ferredoxin [Bifidobacterium longum DJO10A] gi|227213110|gb|EEI80989.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516094|gb|EEQ55961.1| ferredoxin [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296184320|gb|ADH01202.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. longum JDM301] gi|311773144|gb|ADQ02632.1| Ferredoxin [Bifidobacterium longum subsp. longum BBMN68] gi|316915516|gb|EFV36936.1| 4Fe-4S binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320456742|dbj|BAJ67364.1| ferredoxin [Bifidobacterium longum subsp. longum JCM 1217] gi|320461281|dbj|BAJ71901.1| ferredoxin [Bifidobacterium longum subsp. infantis 157F] Length = 106 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|213693103|ref|YP_002323689.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524564|gb|ACJ53311.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459280|dbj|BAJ69901.1| ferredoxin [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 106 Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|171741293|ref|ZP_02917100.1| hypothetical protein BIFDEN_00369 [Bifidobacterium dentium ATCC 27678] gi|283455347|ref|YP_003359911.1| fdxC Ferredoxin [Bifidobacterium dentium Bd1] gi|306823586|ref|ZP_07456961.1| ferredoxin [Bifidobacterium dentium ATCC 27679] gi|309803019|ref|ZP_07697120.1| ferredoxin [Bifidobacterium dentium JCVIHMP022] gi|171276907|gb|EDT44568.1| hypothetical protein BIFDEN_00369 [Bifidobacterium dentium ATCC 27678] gi|283101981|gb|ADB09087.1| fdxC Ferredoxin [Bifidobacterium dentium Bd1] gi|304553293|gb|EFM41205.1| ferredoxin [Bifidobacterium dentium ATCC 27679] gi|308220486|gb|EFO76797.1| ferredoxin [Bifidobacterium dentium JCVIHMP022] Length = 106 Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|154486719|ref|ZP_02028126.1| hypothetical protein BIFADO_00543 [Bifidobacterium adolescentis L2-32] gi|154084582|gb|EDN83627.1| hypothetical protein BIFADO_00543 [Bifidobacterium adolescentis L2-32] Length = 106 Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|294786512|ref|ZP_06751766.1| ferredoxin [Parascardovia denticolens F0305] gi|294485345|gb|EFG32979.1| ferredoxin [Parascardovia denticolens F0305] Length = 108 Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K CV+ CPVDC YE L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MAYVIAEPCVDVKDKACVDECPVDCIYEAPRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 -PGLELWLKINSE 72 P +W K +E Sbjct: 61 LPDEWVWYKDAAE 73 >gi|119025314|ref|YP_909159.1| ferredoxin [Bifidobacterium adolescentis ATCC 15703] gi|212716645|ref|ZP_03324773.1| hypothetical protein BIFCAT_01575 [Bifidobacterium catenulatum DSM 16992] gi|225351077|ref|ZP_03742100.1| hypothetical protein BIFPSEUDO_02660 [Bifidobacterium pseudocatenulatum DSM 20438] gi|118764898|dbj|BAF39077.1| ferredoxin [Bifidobacterium adolescentis ATCC 15703] gi|212660349|gb|EEB20924.1| hypothetical protein BIFCAT_01575 [Bifidobacterium catenulatum DSM 16992] gi|225158533|gb|EEG71775.1| hypothetical protein BIFPSEUDO_02660 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 106 Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YVV + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPDEW 65 >gi|261338294|ref|ZP_05966178.1| ferredoxin [Bifidobacterium gallicum DSM 20093] gi|270276957|gb|EFA22811.1| ferredoxin [Bifidobacterium gallicum DSM 20093] Length = 107 Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ + C+ K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + Sbjct: 1 MAYVIAQPCVDVKDKACVDECPVDCIYEGVRTLYINPNECVDCGACEPVCPTEAIFYEDD 60 Query: 61 PGLEL 65 E Sbjct: 61 LPEEW 65 >gi|269837836|ref|YP_003320064.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787099|gb|ACZ39242.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 80 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 MTYV+ + CI K CVEVCPVDC + + I+PDECIDCGVC CPV+AI + Sbjct: 1 MTYVIAQPCIGLKDASCVEVCPVDCIHSDDEAEQYFINPDECIDCGVCAEVCPVEAIFFE 60 Query: 59 T--EPGLELWLKINSEYATQ 76 +L+IN EY + Sbjct: 61 DDLPEQWADFLRINREYFQK 80 >gi|146337764|ref|YP_001202812.1| ferredoxin II (fragment) [Bradyrhizobium sp. ORS278] gi|146190570|emb|CAL74572.1| ferredoxin II (fragment) [Bradyrhizobium sp. ORS278] Length = 68 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 41/68 (60%), Positives = 48/68 (70%) Query: 45 VCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 +CEPECP DAIKPDTEPGLE WL +N+EYA WPNIT KK+ A + DG K+EKYF Sbjct: 1 MCEPECPADAIKPDTEPGLEKWLGVNAEYAKSWPNITQKKDPPGDAKEHDGEDGKFEKYF 60 Query: 105 SPNPGGKN 112 S G + Sbjct: 61 SSKAGAGD 68 >gi|118592808|ref|ZP_01550197.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stappia aggregata IAM 12614] gi|118434578|gb|EAV41230.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Stappia aggregata IAM 12614] Length = 115 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++ CI K C CPVDC YEGE IHP+ECI+CG+CE CPVDAI+ D E Sbjct: 1 MALIIKSECIDVKDGICTTSCPVDCIYEGERMFYIHPEECIECGMCESICPVDAIRYDDE 60 Query: 61 --PGLELWLKINSEYAT 75 +++IN + Sbjct: 61 VTGADRAFVEINKDVFQ 77 >gi|111220922|ref|YP_711716.1| ferredoxin [Frankia alni ACN14a] gi|111148454|emb|CAJ60125.1| Ferredoxin (partial match) [Frankia alni ACN14a] Length = 140 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T C+ CV+ CPVDC YEG L IHP+ECIDCG C CPVDAI + + Sbjct: 1 MVYVITAACLDVTDRSCVDECPVDCVYEGRRKLYIHPEECIDCGACARVCPVDAIVWERD 60 Query: 61 PGLELWLKINSEYATQWPNITTKKES---LPSAAKMDGVKQKYEKYFSPNPGGKN 112 + + +A + ++ + + A + V + + P + Sbjct: 61 LDGDGHAHLGDAHAFFYRPLSGRPKPIGAPGGAGMLGPVGVDTDLVTAARPAVGD 115 >gi|226357256|ref|YP_002786996.1| ferredoxin [Deinococcus deserti VCD115] gi|226319246|gb|ACO47242.1| putative ferredoxin [Deinococcus deserti VCD115] Length = 78 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+ CI K C EVCPV+C Y+ IHPDECIDCG C P CPV AI P D Sbjct: 1 MPHVIVSPCIGTKDQACTEVCPVECIYDAGEMFLIHPDECIDCGACVPACPVSAIFPEED 60 Query: 59 TEPGLELWLKINSEYA 74 G E ++ N E+ Sbjct: 61 VPAGEESFIARNREHF 76 >gi|168703585|ref|ZP_02735862.1| ferredoxin [Gemmata obscuriglobus UQM 2246] Length = 103 Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 8/94 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M +VVT NC CK+TDC VCPV+CFY+ E L I P++CIDC C PECPV+AI P+ Sbjct: 1 MPHVVTSNCNDCKYTDCCVVCPVECFYQDETMLYIDPEDCIDCEACVPECPVEAIYSEPN 60 Query: 59 TEPGLELWLKINSEYATQWP------NITTKKES 86 ++++N+E A+ +IT K + Sbjct: 61 VPSQWSSFIQLNAERASALKSAGGDAHITEKAPA 94 >gi|117164510|emb|CAJ88056.1| putative ferredoxin reductase [Streptomyces ambofaciens ATCC 23877] Length = 510 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C L I P CIDCG C CPV Sbjct: 1 MAFAITQTC--CSDATCVSVCPVNCIRPTPEEQAFGSTEMLHIDPKTCIDCGACADACPV 58 Query: 53 DAIKP--DTEPGLELWLKIN 70 DAI P G + +N Sbjct: 59 DAIFPVESLTAGQREYADMN 78 >gi|313902219|ref|ZP_07835626.1| ferredoxin [Thermaerobacter subterraneus DSM 13965] gi|313467499|gb|EFR63006.1| ferredoxin [Thermaerobacter subterraneus DSM 13965] Length = 82 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E CI K CVEVCPVDC YEGE+ IHP+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCIGTKDQSCVEVCPVDCIYEGEDQFFIHPEECIGCSACAAVCPVEAIYDEDE 60 Query: 61 --PGLELWLKINSEYATQ 76 E + + ++ + Sbjct: 61 VPEQWEHYKEKARKFFEE 78 >gi|307323385|ref|ZP_07602595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306890874|gb|EFN21850.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 106 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 42/90 (46%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ +C+ C+E CPVDC YEGE L I+P ECIDCG CE CP AI D + Sbjct: 1 MAYVIGASCVDIMDRSCMEECPVDCIYEGERKLYINPVECIDCGACEVACPEQAITVDRK 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSA 90 E + P + A Sbjct: 61 ADPEHRADNRRFFEEVLPGRDAPLGTPGGA 90 >gi|296120281|ref|YP_003628059.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296012621|gb|ADG65860.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 84 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 MT VVTE C CK C+ VCP DCF+E + I+P+ECIDC C ECPV AI + Sbjct: 1 MTMVVTEPCRGCKDKACLVVCPCDCFHEDAEMVYINPEECIDCDACVSECPVSAIFHEDN 60 Query: 60 -EPGLELWLKINSEYATQWP 78 + ++++N++ + P Sbjct: 61 VPAQWQHFVELNAQRSRVCP 80 >gi|111226128|ref|YP_716922.1| ferredoxin [Frankia alni ACN14a] gi|111153660|emb|CAJ65420.1| Ferredoxin [Frankia alni ACN14a] Length = 111 Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 4/91 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 MT+VVT CI K T C+ CPVDC YEG L I+P+ECIDCG CE CPVDAI Sbjct: 1 MTFVVTSACIDVKDTACLGECPVDCIYEGVRKLYINPNECIDCGACESACPVDAIMSVRL 60 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPS 89 ++ + + T + + + Sbjct: 61 VPRAEAEFVVDEARFFTT--ILPGRDAPVGD 89 >gi|163745320|ref|ZP_02152680.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161382138|gb|EDQ06547.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 115 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++T CI K C CPVDC YEGE IHP ECI+CG+CE CPVDAI+ D E Sbjct: 1 MPLIITSACIDVKDGICTTSCPVDCIYEGERMFYIHPTECIECGMCESICPVDAIRYDDE 60 Query: 61 P--GLELWLKINSEYA 74 +++IN+E Sbjct: 61 ATGAEAKFVRINAEAF 76 >gi|15865463|emb|CAC81334.1| putative ferredoxin [Pseudomonas sp. KIE171] Length = 112 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPDT 59 M YV+++ CI + CV+VCPVDC YE E L I PDEC +CG CE CPV AI D Sbjct: 1 MPYVISDPCIKSRDQACVDVCPVDCIYEAEGRLWIQPDECTECGACESVCPVTAICYVDA 60 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 E + + + T P S A K+ +K + + Sbjct: 61 ESDDQDLREAREFFDTVLPGCDGPIGSPRGAQKVGRIKSDHPRVL 105 >gi|119977|sp|P03941|FER_ALIAC RecName: Full=Ferredoxin Length = 78 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--T 59 +V+T CI K DCVE CPVD +EG + I PD CIDC CEP CPV+AI + Sbjct: 1 PFVITSPCIGEKAADCVETCPVDAIHEGPDQYYIDPDLCIDCAACEPVCPVNAIYQEEFV 60 Query: 60 EPGLELWLKINSEYAT 75 + +++ N + Sbjct: 61 PEDEKEFIEKNRNFFR 76 >gi|254184178|ref|ZP_04890768.1| putative ferredoxin [Burkholderia pseudomallei 1655] gi|184214709|gb|EDU11752.1| putative ferredoxin [Burkholderia pseudomallei 1655] Length = 70 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 43/70 (61%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT+VVTE CI CK+TDCV+VCPVDCF EG NFLAI PDECIDC VC ECP +AI D Sbjct: 1 MTHVVTEACIKCKYTDCVDVCPVDCFREGPNFLAIDPDECIDCAVCVAECPTNAIYAEED 60 Query: 59 TEPGLELWLK 68 + + Sbjct: 61 VPGDQQHFTA 70 >gi|284033073|ref|YP_003383004.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Kribbella flavida DSM 17836] gi|283812366|gb|ADB34205.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kribbella flavida DSM 17836] Length = 499 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPV 52 MTYV+ +C C CV CP++C + + L I P CIDCG C CPV Sbjct: 1 MTYVIAGDC--CADARCVSACPMNCIHPSPGEPGFGTTDGLFIDPRTCIDCGACAEVCPV 58 Query: 53 DAIKPDTEPGLELWLKINSEYATQWPNITTKKE---SLPSAAKMDG 95 DA +P + + + +N+ Y + P + P + G Sbjct: 59 DAAQP-ADKAAPIDVALNAAYFAERPAVDALDLDAWEPPRFDRWTG 103 >gi|307610629|emb|CBX00217.1| hypothetical protein LPW_19621 [Legionella pneumophila 130b] Length = 78 Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 IHPDECIDC +CEPECPV+AI + + + + ++N+E + WPNIT KK++ A Sbjct: 2 IHPDECIDCALCEPECPVNAIVSEDDLTEEQQQFKELNAELSKTWPNITAKKDAPSDAKD 61 Query: 93 MDGVKQKYE 101 + VK K + Sbjct: 62 WEEVKDKLQ 70 >gi|111223262|ref|YP_714056.1| ferredoxin [Frankia alni ACN14a] gi|111150794|emb|CAJ62498.1| Ferredoxin [Frankia alni ACN14a] Length = 115 Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 45/89 (50%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T CI K C+E CP DC YEG+ + I+PDEC +CG C CPV A D Sbjct: 5 MPYVITAACIDVKDGSCLEGCPADCIYEGDRKMYINPDECTECGACAVSCPVGAALSDDR 64 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPS 89 + I+SE A + + E L Sbjct: 65 VKAKDKEFIDSEAAFFTDILPGRDEPLGE 93 >gi|148359470|ref|YP_001250677.1| ferredoxin I [Legionella pneumophila str. Corby] gi|148281243|gb|ABQ55331.1| ferredoxin I [Legionella pneumophila str. Corby] Length = 78 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 IHPDECIDC +CEPECPV+AI + + + + ++N+E + WPNIT KK++ A Sbjct: 2 IHPDECIDCALCEPECPVNAIVSEDDLTDEQQQFKELNAELSKTWPNITAKKDAPSDAKD 61 Query: 93 MDGVKQKYE 101 + VK K + Sbjct: 62 WEEVKDKLQ 70 >gi|313679357|ref|YP_004057096.1| ferredoxin [Oceanithermus profundus DSM 14977] gi|313152072|gb|ADR35923.1| ferredoxin [Oceanithermus profundus DSM 14977] Length = 82 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAIKP 57 M +++ E C+ K CVEVCPV+C YE + L IHP+ECIDCG C P CPV AI P Sbjct: 1 MAHIICEPCVGVKDKACVEVCPVECIYEAPAEYDMLYIHPEECIDCGACVPACPVSAIFP 60 Query: 58 --DTEPGLELWLKINSEYA 74 D + ++ +N + A Sbjct: 61 EEDVPEQWKSYIDLNYKLA 79 >gi|317122522|ref|YP_004102525.1| ferredoxin [Thermaerobacter marianensis DSM 12885] gi|315592502|gb|ADU51798.1| ferredoxin [Thermaerobacter marianensis DSM 12885] Length = 82 Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ E C+ K CVEVCPVDC YEGE+ IHP+ECI C C CPV+AI + E Sbjct: 1 MIYVICEPCVGTKDQSCVEVCPVDCIYEGEDQFFIHPEECIGCSACAAVCPVEAIYDEDE 60 Query: 61 --PGLELWLKINSEYATQ 76 E + + ++ + Sbjct: 61 VPEQWEHYKEKARKFFEE 78 >gi|302547666|ref|ZP_07300008.1| ferredoxin [Streptomyces hygroscopicus ATCC 53653] gi|302465284|gb|EFL28377.1| ferredoxin [Streptomyces himastatinicus ATCC 53653] Length = 108 Score = 94.4 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 40/90 (44%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+ C+ C+E CPVDC YEG L I+P ECIDCG CE CP AI D Sbjct: 1 MAYVIGPACVDIMDRSCMEECPVDCIYEGMRKLYINPVECIDCGACETACPEQAIAVDRL 60 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSA 90 E + P T + A Sbjct: 61 AKPEHREDNRRFFTEPLPGRTEPLGTPGGA 90 >gi|86741719|ref|YP_482119.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] gi|86568581|gb|ABD12390.1| 4Fe-4S ferredoxin, iron-sulfur binding [Frankia sp. CcI3] Length = 111 Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +V+T CI K C+E CP DC YEG+ + I+PDEC +CG C CPV A D Sbjct: 1 MPFVITAACIDVKDGSCLEGCPADCIYEGDRKMYINPDECTECGACAVSCPVGAAISDDR 60 Query: 60 -EPGLELWLKINS-EYATQWPNITTKKESLPSAAKMDGVK 97 + +++ + ++ P A K+ +K Sbjct: 61 VPAKDKEFIESEALFFSAVLPGRDAPLGEPGGATKLGKIK 100 >gi|108804037|ref|YP_643974.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765280|gb|ABG04162.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 87 Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+TE CI K+T CV VCPVDC Y+ + I+P+ECIDC +C P+CPV+AI P Sbjct: 1 MAYVITEACIGTKNTACVAVCPVDCIYDAGDQYVINPEECIDCSMCMPQCPVEAIYPGDQ 60 Query: 60 -EPGLELWLKINSEY 73 L + K ++ Sbjct: 61 VPDDLRHYAKKAADL 75 >gi|325121599|gb|ADY81122.1| 7-Fe ferredoxin [Acinetobacter calcoaceticus PHEA-2] Length = 74 Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 I+PDECIDC +CEPECP +AI + E G E+++++N+E + +WPNIT + + Sbjct: 2 INPDECIDCALCEPECPANAIFSEDELPEGQEVFIELNAELSQKWPNITQIGDQPADREE 61 Query: 93 MDGVKQKYE 101 +G K + Sbjct: 62 WNGKPDKLQ 70 >gi|326384264|ref|ZP_08205946.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197129|gb|EGD54321.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 546 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEY 73 +C+ P + + L I P+ CIDCG C ECPV AI PD E +L+IN++Y Sbjct: 7 NCIHPTPDEPDFLTAEMLYIDPETCIDCGACIDECPVSAIYPDDQLPEKEEPFLQINADY 66 Query: 74 ATQWPN----ITTKKES-LPS 89 + K LP Sbjct: 67 YKDHDVEGGLVRHPKAPKLPD 87 >gi|254823188|ref|ZP_05228189.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium intracellulare ATCC 13950] Length = 498 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG--LELWLKINSE 72 +C+ P + + L I P C+DCG C CPV AI PDT +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDTRLDTNQLPFVEINAS 60 Query: 73 YATQWPNITTKKESLPSAAKMDGV 96 + + P E LP +K+ V Sbjct: 61 FYPKRPE----GEKLPPTSKLAPV 80 >gi|126641295|ref|YP_001084279.1| 7-Fe ferredoxin [Acinetobacter baumannii ATCC 17978] gi|213156378|ref|YP_002318798.1| ferredoxin-1 [Acinetobacter baumannii AB0057] gi|215483972|ref|YP_002326197.1| Ferredoxin 1 [Acinetobacter baumannii AB307-0294] gi|213055538|gb|ACJ40440.1| ferredoxin-1 [Acinetobacter baumannii AB0057] gi|213987413|gb|ACJ57712.1| Ferredoxin 1 [Acinetobacter baumannii AB307-0294] gi|322507872|gb|ADX03326.1| fdxA [Acinetobacter baumannii 1656-2] gi|323517469|gb|ADX91850.1| ferredoxin [Acinetobacter baumannii TCDC-AB0715] Length = 74 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 I+PDECIDC +CEPECP +AI + E G E+++++N+E + +WPNIT E + Sbjct: 2 INPDECIDCALCEPECPANAIFSEDELPEGQEVFIELNAELSQKWPNITQIGEQPADREE 61 Query: 93 MDGVKQKYE 101 +G K + Sbjct: 62 WNGKPDKLQ 70 >gi|269784345|emb|CBH51374.1| ferredoxin [Amycolatopsis balhimycina] Length = 137 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M YV+ C+ K CV CP DC YEG L IHPDEC++CG CE CPV A+ + Sbjct: 1 MAYVIGLPCVDVKDRACVAECPTDCIYEGARSLYIHPDECMECGACEVVCPVGAVHYEEA 60 Query: 60 -EPGLELWLKINSEYATQWPNITTKKESL--PSAAKMDGVKQKYEKYFSPNP 108 L N + T+ + + L P A G + P Sbjct: 61 LPAALREHAPDNGRFFTE--VLPGRDAPLGSPGGAAAVGPLDADTTMIAALP 110 >gi|254818988|ref|ZP_05223989.1| putative ferredoxin FdxA [Mycobacterium intracellulare ATCC 13950] Length = 106 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKIN 70 CV+ CPVDC YEG L IHPDEC+DCG CEP CPV+AI + L+ L N Sbjct: 1 MDRACVDECPVDCIYEGGRALYIHPDECVDCGACEPVCPVEAIYYEDDLPEDLQPHLADN 60 Query: 71 SE-YATQWPNITTKKESLPSAAK 92 + +A P S AAK Sbjct: 61 AAFFAETLPGRDEPLGSPGGAAK 83 >gi|332973090|gb|EGK11025.1| ferredoxin [Desmospora sp. 8437] Length = 77 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 M +V+T C K +CVEVCPVDC + E I PD CI+CG CEP CPV+AI + Sbjct: 1 MAFVITSACKDEKAAECVEVCPVDCIHGDEVMYYIDPDTCIECGACEPVCPVEAIYEEDM 60 Query: 60 -EPGLELWLKINSEYAT 75 + +++IN+ + Sbjct: 61 VPEEEKEYIQINANFFK 77 >gi|108804033|ref|YP_643970.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765276|gb|ABG04158.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 79 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+TE CI K CVEV PVDC + I+P+ECIDCG CEPEC V+AI P+ E Sbjct: 1 MPYVITEPCIGTKDQSCVEVYPVDCICDAGEQFMINPEECIDCGACEPECTVEAIYPEDE 60 Query: 61 --PGLELWLKINSEYA 74 ++ ++ E+ Sbjct: 61 VPEDMQQYITKAQEFF 76 >gi|326383750|ref|ZP_08205435.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197514|gb|EGD54703.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 506 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG--LELWLKINSE 72 +C+ P + + + L I P+ CIDCG C CPVDAI P +++++IN+ Sbjct: 1 MNCIHPTPEERGFGTSDILHIDPEACIDCGACADACPVDAIFPADRLSARDQIFVEINAG 60 Query: 73 YATQWPNITT 82 Y P+I++ Sbjct: 61 YYRDHPDISS 70 >gi|332285866|ref|YP_004417777.1| ferredoxin [Pusillimonas sp. T7-7] gi|330429819|gb|AEC21153.1| ferredoxin [Pusillimonas sp. T7-7] Length = 86 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQ--WPNITT 82 EG NFL I+PDECIDC +C ECP+ AI D E ++ +N + + W I+ Sbjct: 1 MEGPNFLVINPDECIDCSICVAECPLGAIVSDHEVADEQRHFIDLNRQLSQHPAWKRISR 60 Query: 83 KKESLPSAAKMDGVKQKY 100 K L VK K Sbjct: 61 AKAPLSDHEHWATVKDKL 78 >gi|89056240|ref|YP_511691.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88865789|gb|ABD56666.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 116 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V+ C+ K C CPVDC YEGE IHP ECI+CG+CE CPVDAI+ D E Sbjct: 1 MALVILSACVDVKDGICTTSCPVDCIYEGERMFYIHPTECIECGMCESICPVDAIRYDDE 60 Query: 61 --PGLELWLKINSEYAT 75 + + +N+ Sbjct: 61 VPAEEQPFADLNTSVFQ 77 >gi|32476854|ref|NP_869848.1| ferredoxin [Rhodopirellula baltica SH 1] gi|32447402|emb|CAD78991.1| ferredoxin [Rhodopirellula baltica SH 1] Length = 84 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT VVT+ CI CK C+ VCP DCF+E E + I+PD+C+DC C PECP +AI D Sbjct: 1 MTMVVTQPCIGCKDKACLTVCPADCFHEDEQMVYINPDDCVDCEACIPECPTEAIFGEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITT 82 + ++ +N+ A P + Sbjct: 61 VPEQWKDFIALNAINADACPPASE 84 >gi|284042634|ref|YP_003392974.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283946855|gb|ADB49599.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 86 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 MTYV+ E CI K C EVCPVDC + ++ L I P+ECIDC C CPV Sbjct: 1 MTYVIAEPCIGEKDHSCTEVCPVDCIHPTQDEPGFAEATMLYIDPEECIDCDACVEACPV 60 Query: 53 DAIKPDT--EPGLELWLKINSEYATQ 76 DAI P+ + + N+ Y Q Sbjct: 61 DAIFPEDLLPAQWAEYAERNAAYFKQ 86 >gi|312200512|ref|YP_004020573.1| ferredoxin [Frankia sp. EuI1c] gi|311231848|gb|ADP84703.1| ferredoxin [Frankia sp. EuI1c] Length = 117 Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-- 58 M YV+ C+ CVE CP+DC Y G L IHP+ECIDCG C CPVDAI D Sbjct: 1 MAYVIGAACVDIMDQSCVEDCPIDCIYTGARKLYIHPEECIDCGACARSCPVDAISWDRD 60 Query: 59 ---TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 +P + + + P AA + V Sbjct: 61 LDPADPDIAHIQDAAAFFYQPLPGQPAPLREPGGAAGLGPV 101 >gi|308371790|ref|ZP_07667247.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu004] gi|308335377|gb|EFP24228.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu004] Length = 555 Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSE 72 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINAS 60 Query: 73 YATQWPNI-----TTKKESLPSAAK 92 Y + P T+K + AA+ Sbjct: 61 YYPKRPAGVKLAPTSKLAPVTPAAE 85 >gi|308231662|ref|ZP_07663905.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu001] gi|308370526|ref|ZP_07666957.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu003] gi|308374124|ref|ZP_07667719.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu006] gi|308375281|ref|ZP_07667984.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu007] gi|308376537|ref|ZP_07668296.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu008] gi|308377537|ref|ZP_07668536.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu009] gi|308378749|ref|ZP_07668818.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu010] gi|308379895|ref|ZP_07669070.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu011] gi|308397494|ref|ZP_07492520.2| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu012] gi|308216365|gb|EFO75764.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu001] gi|308331656|gb|EFP20507.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu003] gi|308342918|gb|EFP31769.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu006] gi|308346746|gb|EFP35597.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu007] gi|308350660|gb|EFP39511.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu008] gi|308355320|gb|EFP44171.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu009] gi|308359259|gb|EFP48110.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu010] gi|308363169|gb|EFP52020.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu011] gi|308366823|gb|EFP55674.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis SUMu012] Length = 555 Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSE 72 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINAS 60 Query: 73 YATQWPNI-----TTKKESLPSAAK 92 Y + P T+K + AA+ Sbjct: 61 YYPKRPAGVKLAPTSKLAPVTPAAE 85 >gi|331698058|ref|YP_004334297.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326952747|gb|AEA26444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 113 Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 31/58 (53%), Positives = 37/58 (63%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 MTYVVT+ C+ C+E CPVDC YEG+ + I+P ECIDCG CE CP A D Sbjct: 1 MTYVVTDACVDVLDRSCLEECPVDCIYEGDRKMYINPVECIDCGACEQACPTAAAVAD 58 >gi|118463699|ref|YP_880273.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium 104] gi|118164986|gb|ABK65883.1| probable ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium 104] Length = 546 Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSE 72 +C+ P + + L I P C+DCG C CPV AI PD + +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDNRLDDKQLPFVEINAS 60 Query: 73 YATQWPNITTKKESLPSAAKMDGV 96 + + P + LP +K+ V Sbjct: 61 FYPKRP----AGQKLPPTSKLAPV 80 >gi|254773900|ref|ZP_05215416.1| ferredoxin/ferredoxin--NADP reductase [Mycobacterium avium subsp. avium ATCC 25291] Length = 546 Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSE 72 +C+ P + + L I P C+DCG C CPV AI PD + +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPAACVDCGACVSACPVGAIAPDNRLDDKQLPFVEINAS 60 Query: 73 YATQWPNITTKKESLPSAAKMDGV 96 + + P + LP +K+ V Sbjct: 61 FYPKRP----AGQKLPPTSKLAPV 80 >gi|260772955|ref|ZP_05881871.1| ferredoxin [Vibrio metschnikovii CIP 69.14] gi|260612094|gb|EEX37297.1| ferredoxin [Vibrio metschnikovii CIP 69.14] Length = 75 Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C PEC AI + E +L++++N+E A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVPECDAQAIFQEDELPDDQKLFIELNAELAEIWPTQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 GKWNGVPNKL 70 >gi|229541517|ref|ZP_04430577.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus coagulans 36D1] gi|229325937|gb|EEN91612.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus coagulans 36D1] Length = 82 Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 31/57 (54%), Positives = 39/57 (68%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M +V+T+ CI K +CV+VCPVDC EGE+ I PD CIDCG C+ CPV+AI Sbjct: 5 MAFVITQPCIGEKAAECVDVCPVDCIAEGEDQYFIDPDICIDCGACQAVCPVEAIYH 61 >gi|312141555|ref|YP_004008891.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|325677227|ref|ZP_08156893.1| ferredoxin-NADP(+) reductase [Rhodococcus equi ATCC 33707] gi|311890894|emb|CBH50213.1| ferredoxin domain oxidoreductase [Rhodococcus equi 103S] gi|325551924|gb|EGD21620.1| ferredoxin-NADP(+) reductase [Rhodococcus equi ATCC 33707] Length = 546 Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 10/71 (14%) Query: 18 VEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WL 67 ++VCPV+C + + L I P CIDCG C ECPVDAI + E + Sbjct: 1 MDVCPVNCIHPTPDEPEFATTEMLYIDPQTCIDCGACVDECPVDAIFGENELSEAHSMYP 60 Query: 68 KINSEYATQWP 78 +IN+ Y + P Sbjct: 61 EINAAYFEKHP 71 >gi|94969826|ref|YP_591874.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94551876|gb|ABF41800.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 86 Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + ++ L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDAEAHANEPMLYIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + + + N++Y Sbjct: 61 SAIFALDDLPEKWKEYAEKNAKYF 84 >gi|327537530|gb|EGF24249.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopirellula baltica WH47] Length = 84 Score = 90.2 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 MT VVT+ CI CK C+ VCP DCF+E E + I+PD+C+DC C PECP +AI D Sbjct: 1 MTMVVTQPCIGCKDKACLTVCPADCFHEDEQMVYINPDDCVDCEACIPECPTEAIFGEDD 60 Query: 59 TEPGLELWLKINSEYATQWPNITT 82 + ++ +N+ A P Sbjct: 61 VPEQWKDFIALNAIKADACPPACE 84 >gi|114776699|ref|ZP_01451742.1| Ferredoxin [Mariprofundus ferrooxydans PV-1] gi|114552785|gb|EAU55216.1| Ferredoxin [Mariprofundus ferrooxydans PV-1] Length = 114 Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 60/113 (53%), Gaps = 14/113 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-------EGENFLAIHPDECIDCGVCEPECPVD 53 M +VVT+ C C T CV VCPVDCFY E N L I P+ECIDC VCEPECP + Sbjct: 1 MAFVVTQLCKDCVDTACVAVCPVDCFYQPKDISAETPNMLYISPEECIDCAVCEPECPWE 60 Query: 54 AIKP--DTEPGLELWLKINSEYATQWPNITT----KKESLPSAAKMDGVKQKY 100 AI P D E + +N E + ++ K + PSA ++ K KY Sbjct: 61 AIYPEEDVPDVFEDDIALN-ELSDTERDLFELAEVKDHTPPSADEVAANKAKY 112 >gi|213970229|ref|ZP_03398360.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|213925110|gb|EEB58674.1| ferredoxin [Pseudomonas syringae pv. tomato T1] Length = 89 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PD 58 M YVV + C+ CK T CV+VCPVD F + + L I PD CI+CGVCEPECPVDAI + Sbjct: 1 MPYVVGKECLSCKSTICVDVCPVDAFRDADYQLVICPDTCIECGVCEPECPVDAIINPEE 60 Query: 59 TEPGLELWLKINSEYATQWPNI 80 + +NSE + P I Sbjct: 61 YPGENHDVIVLNSELSKTSPVI 82 >gi|31044101|dbj|BAA33533.3| ferredoxin [Streptomyces griseus] Length = 57 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 34/57 (59%), Positives = 41/57 (71%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 MTYV+ + C+ K C+E CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI Sbjct: 1 MTYVIAQPCVDVKDKACIEECPVDCIYEGQRSLYIHPDECVDCGACEPVCPVEAIFY 57 >gi|56964420|ref|YP_176151.1| ferredoxin [Bacillus clausii KSM-K16] gi|56910663|dbj|BAD65190.1| ferredoxin [Bacillus clausii KSM-K16] Length = 79 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ CI K +CV+VCPVDC EGE+ I+PD CIDCG C+ CPVDAI + E Sbjct: 1 MAFVILSPCIGEKAGECVDVCPVDCIEEGEDQYFINPDICIDCGACQGVCPVDAIVEEYE 60 Query: 61 --PGLELWLKINSEYA 74 P + +LK E+ Sbjct: 61 MAPEDQKFLKKAEEFF 76 >gi|23100035|ref|NP_693501.1| ferredoxin [Oceanobacillus iheyensis HTE831] gi|22778266|dbj|BAC14536.1| ferredoxin [Oceanobacillus iheyensis HTE831] Length = 79 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+ + C K +CV VCPVDC EG I PD CIDCG C+ CPV AI+ + + Sbjct: 1 MAFVILDPCRGEKAGECVSVCPVDCIEEGVKQFYIDPDICIDCGACKAVCPVSAIEEEYD 60 Query: 61 --PGLELWLKINSEYAT 75 P E +L+ E+ Sbjct: 61 LTPNQEKYLEEAEEFFA 77 >gi|261252043|ref|ZP_05944617.1| ferredoxin [Vibrio orientalis CIP 102891] gi|260938916|gb|EEX94904.1| ferredoxin [Vibrio orientalis CIP 102891] Length = 75 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C EC AI + E L++++N+E A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVDECDAHAIFQEDEVPDDQTLFIELNAELAELWPVQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 EKWNGVPDKL 70 >gi|320335406|ref|YP_004172117.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319756695|gb|ADV68452.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 78 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T+ C + C EVCP DC ++ I P+ECIDCG C CPV AI + + Sbjct: 1 MAYVITDRCAGVRDGACREVCPKDCIHDAGAQFVIDPEECIDCGACVVACPVGAIAHEDD 60 Query: 61 --PGLELWLKINSEYA 74 ++ ++N + Sbjct: 61 LVGAEGVFAQVNRAFF 76 >gi|229008434|ref|ZP_04165889.1| Ferredoxin [Bacillus mycoides Rock1-4] gi|228752827|gb|EEM02400.1| Ferredoxin [Bacillus mycoides Rock1-4] Length = 78 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+T CI K DCV+VCPV+C G + I+P CIDCG CE CPV+AI + E Sbjct: 1 MAFVITSPCISEKAADCVDVCPVNCIELGSDQYFINPALCIDCGACETACPVEAIYYEDE 60 Query: 61 --PGLELWLKINSEYA 74 +++ + +Y Sbjct: 61 LLDEDQIFFEKAKKYF 76 >gi|169827413|ref|YP_001697571.1| ferredoxin [Lysinibacillus sphaericus C3-41] gi|168991901|gb|ACA39441.1| Ferredoxin 7Fe (Seven-iron ferredoxin) [Lysinibacillus sphaericus C3-41] Length = 78 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 38/64 (59%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+TE C K C++VCPV+C + I+PD CIDCG CE CPV+AI + E Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVNTDTQYVINPDICIDCGACELVCPVEAIFFEDE 60 Query: 61 PGLE 64 E Sbjct: 61 LPAE 64 >gi|126650009|ref|ZP_01722242.1| ferredoxin [3Fe-4S](4Fe-4S) [Bacillus sp. B14905] gi|126593181|gb|EAZ87143.1| ferredoxin [3Fe-4S](4Fe-4S) [Bacillus sp. B14905] Length = 78 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 38/64 (59%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+TE C K C++VCPV+C + I+PD CIDCG CE CPV+AI + E Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVNTDTQYVINPDICIDCGACELVCPVEAIFFEDE 60 Query: 61 PGLE 64 E Sbjct: 61 LPAE 64 >gi|284043842|ref|YP_003394182.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283948063|gb|ADB50807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 89 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ ++CI K CVEVCPVDC + N L I+P+ECIDC C +CPV Sbjct: 1 MAYVINQSCIGTKDASCVEVCPVDCIHPTPNEPGFDETDQLYINPEECIDCDACFEQCPV 60 Query: 53 DAIKPDT--EPGLELWLKINSEYATQ 76 +AI PD ++ N+ + Q Sbjct: 61 NAITPDDLVPEKWPDAVERNAAFFQQ 86 >gi|225872601|ref|YP_002754056.1| iron-sulfur cluster-binding protein [Acidobacterium capsulatum ATCC 51196] gi|225791610|gb|ACO31700.1| iron-sulfur cluster-binding protein [Acidobacterium capsulatum ATCC 51196] Length = 86 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDEGTYGDAEQLYIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + + N+E+ Sbjct: 61 SAIFAIDDLPEKWQNFATKNAEHF 84 >gi|298251068|ref|ZP_06974872.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297549072|gb|EFH82939.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 86 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 M YV+T+ I K CVEVC VDC + E L+I+PDECI+CG E CPV Sbjct: 1 MPYVITQLYIGSKDACCVEVCLVDCIHPTPDEEEFETTEHLSINPDECIECGAUEAACPV 60 Query: 53 DAIKPD--TEPGLELWLKINSEYATQ 76 AI + ++ IN+ + + Sbjct: 61 TAIFEEPLVPQEWRQYIAINANFFKR 86 >gi|299536448|ref|ZP_07049760.1| ferredoxin 7Fe [Lysinibacillus fusiformis ZC1] gi|298727932|gb|EFI68495.1| ferredoxin 7Fe [Lysinibacillus fusiformis ZC1] Length = 78 Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 37/64 (57%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +V+TE C K C++VCPV+C + I PD CIDCG CE CPV+AI + + Sbjct: 1 MAFVITELCRDEKAAVCLDVCPVNCIVMTDTQYVIDPDLCIDCGACELVCPVEAIYFEDD 60 Query: 61 PGLE 64 E Sbjct: 61 LPSE 64 >gi|260778119|ref|ZP_05887012.1| ferredoxin [Vibrio coralliilyticus ATCC BAA-450] gi|260606132|gb|EEX32417.1| ferredoxin [Vibrio coralliilyticus ATCC BAA-450] Length = 75 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I+P ECIDCG+C EC +AI + E L++++N++ A WP T K ++ A Sbjct: 1 MVINPIECIDCGLCVDECDANAIFQEDEVPADQTLYVELNAQLAELWPVQTEVKPAMDEA 60 Query: 91 AKMDGVKQKY 100 K +GV K Sbjct: 61 EKWNGVPDKL 70 >gi|23099185|ref|NP_692651.1| ferredoxin [3Fe-4S][4Fe-4S] [Oceanobacillus iheyensis HTE831] gi|22777413|dbj|BAC13686.1| ferredoxin [3Fe-4S][4Fe-4S] [Oceanobacillus iheyensis HTE831] Length = 79 Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 M +V+T C K +CVEVCPVDC EG++ I PD CIDCG CE CPV+AI + Sbjct: 1 MAFVITSPCKTEKAGECVEVCPVDCIEEGKDMFYIEPDICIDCGACEAVCPVEAIYMEDE 60 Query: 59 TEPGLELWLKINSEYAT 75 ++ +N + Sbjct: 61 VPEEENEYISLNRLFFE 77 >gi|158318907|ref|YP_001511415.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Frankia sp. EAN1pec] gi|158114312|gb|ABW16509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EAN1pec] Length = 112 Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 4/105 (3%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKP 57 M +V+T CI K C+ CP DC YEG + I+PDEC +CG C CPV A I Sbjct: 1 MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDE 60 Query: 58 DTEPGLELWLKINS-EYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + ++K ++ P AA++ + E Sbjct: 61 MVPDEEQDFIKSEELFFSEVLPGRDEPLGEPGGAAEVGKINADSE 105 >gi|116620169|ref|YP_822325.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223331|gb|ABJ82040.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 86 Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDEPAYADAELLYIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + N+ Y Sbjct: 61 SAIFALDDLPEKWSDFTAKNAAYY 84 >gi|227501607|ref|ZP_03931656.1| ferredoxin [Corynebacterium accolens ATCC 49725] gi|306835772|ref|ZP_07468773.1| ferredoxin [Corynebacterium accolens ATCC 49726] gi|227077632|gb|EEI15595.1| ferredoxin [Corynebacterium accolens ATCC 49725] gi|304568346|gb|EFM43910.1| ferredoxin [Corynebacterium accolens ATCC 49726] Length = 95 Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 CVE CPVDC YEG+ L IHPDEC+DCG CEP CPV+AI + + E W+ N Sbjct: 1 MDRGCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDDVPDE-WIDYNDA 59 Query: 73 YATQWPNITTKKES 86 A + ++ + + Sbjct: 60 NAAFFDDLGSPGGA 73 >gi|284047254|ref|YP_003397594.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] gi|283951475|gb|ADB54219.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Conexibacter woesei DSM 14684] Length = 87 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K CVEVCPVDC + + L I P+ECIDC C CPV Sbjct: 1 MAYVIAEPCIGAKDNSCVEVCPVDCIHPTPDEPDYDRVEMLYIDPEECIDCDACVEACPV 60 Query: 53 DAIKPDT--EPGLELWLKINSEYAT 75 DA + + +IN+ Y Sbjct: 61 DACFAEDQLPDEWSKYAEINANYYA 85 >gi|297564742|ref|YP_003683714.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Meiothermus silvanus DSM 9946] gi|296849191|gb|ADH62206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Meiothermus silvanus DSM 9946] Length = 83 Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKP- 57 M YV+ E CI K C VCP + + L I PD CI G+C CPV AI P Sbjct: 1 MAYVIAEPCIGHKDLSCTVVCPTEAIGGRPSDPQLYIDPDLCIHYGLCASVCPVGAIFPQ 60 Query: 58 -DTEPGLELWLKINSEYATQW 77 D + + N +Y +W Sbjct: 61 EDLPEAWAAYAEGNRDYFRRW 81 >gi|299139029|ref|ZP_07032206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidobacterium sp. MP5ACTX8] gi|298599183|gb|EFI55344.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidobacterium sp. MP5ACTX8] Length = 86 Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T CV+ CPVDC + ++ L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACVDACPVDCIHPKKDETGHGEAEQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + + N+ + Sbjct: 61 SAIYAGDDLPDKWVSFQEKNATHF 84 >gi|162453825|ref|YP_001616192.1| ferredoxin/ferredoxin--NADP reductase [Sorangium cellulosum 'So ce 56'] gi|161164407|emb|CAN95712.1| Probable ferredoxin/ferredoxin--NADP reductase [Sorangium cellulosum 'So ce 56'] Length = 107 Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 21/96 (21%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY------------EGENF-------LAIHPDECI 41 M YV+ E C+ T CV VCPVDC + EGE L I P+ CI Sbjct: 1 MAYVIAEPCVATCDTACVPVCPVDCIHGPLAADEISRIPEGERKTRLAGLQLYIDPESCI 60 Query: 42 DCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 CG CE ECPV AI + E + + +IN+ + Sbjct: 61 CCGACENECPVGAIFDEDELPAEWQRYREINARFFD 96 >gi|322436219|ref|YP_004218431.1| iron-sulfur cluster-binding protein [Acidobacterium sp. MP5ACTX9] gi|321163946|gb|ADW69651.1| iron-sulfur cluster-binding protein [Acidobacterium sp. MP5ACTX9] Length = 86 Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K + CV+ CPVDC + ++ L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDSACVDACPVDCIHPKKDENGYSDATQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + N+ + Sbjct: 61 SAIYAGDDLPEKWAEYQDKNAAHF 84 >gi|297170989|gb|ADI22004.1| ferredoxin [uncultured myxobacterium HF0200_01L06] Length = 117 Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPV 52 MT+V+T C CVEVCPVDC + N L I P+ECI+CGVCEPECP Sbjct: 1 MTWVITSLCRDKVDMSCVEVCPVDCIVQYTGDDTDKFPNQLYIDPEECINCGVCEPECPW 60 Query: 53 DAIKPD--TEPGLELWLKINSEYATQWPNITTKKES---LPSAAKMDGVKQK 99 +AI D E +N++ ++ PSA ++ K+K Sbjct: 61 EAIFEDEQVPDVFEADTALNADIVEVRDQFEVPEKPDMDPPSADEVKANKEK 112 >gi|56964940|ref|YP_176671.1| ferredoxin [Bacillus clausii KSM-K16] gi|56911183|dbj|BAD65710.1| ferredoxin [Bacillus clausii KSM-K16] Length = 79 Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M++V+ CI K +C EVCPVDC EG++ I+PD CIDCG C+ CPVDAI + E Sbjct: 1 MSFVILSPCIGEKAGECAEVCPVDCIEEGDDQYFINPDICIDCGACQGVCPVDAIVEEYE 60 Query: 61 --PGLELWLKINSEYA 74 E +LK + Sbjct: 61 MSKEDEPFLKKAEAFF 76 >gi|215445027|ref|ZP_03431779.1| NADPH:adrenodoxin oxidoreductase fprB [Mycobacterium tuberculosis T85] Length = 159 Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL--WLKINSE 72 +C+ P + + L I P C+DCG C CPV AI P+T E +++IN+ Sbjct: 1 MNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINAS 60 Query: 73 YATQWPNI-----TTKKESLPSAAK 92 Y + P T+K + AA+ Sbjct: 61 YYPKRPAGVKLAPTSKLAPVTPAAE 85 >gi|149925530|ref|ZP_01913794.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149825647|gb|EDM84855.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 80 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPSAAK 92 I+P+ CIDCGVC PECP AI + + +++IN+ A QWP I + KE L A Sbjct: 2 INPEGCIDCGVCIPECPASAIFEEDNVPADQQEFIEINARLAQQWPVIDSAKEPLADADA 61 Query: 93 MDGVKQKYE 101 V K + Sbjct: 62 WVDVTNKKQ 70 >gi|320161502|ref|YP_004174726.1| putative ferredoxin [Anaerolinea thermophila UNI-1] gi|319995355|dbj|BAJ64126.1| putative ferredoxin [Anaerolinea thermophila UNI-1] Length = 136 Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAI 55 MT+V+T C+ + C VCPV+C G+ + I PD CIDCG C PECP +AI Sbjct: 1 MTHVITSLCL--RDGGCATVCPVECIVPGQPVDEWPWYYIDPDTCIDCGACVPECPWEAI 58 Query: 56 KPDTEPGLE 64 P+ E + Sbjct: 59 FPEDEVPSQ 67 >gi|261407735|ref|YP_003243976.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Paenibacillus sp. Y412MC10] gi|261284198|gb|ACX66169.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus sp. Y412MC10] Length = 78 Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTE 60 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI D Sbjct: 2 YVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAIFYFEDLP 61 Query: 61 PGLELWLKINSEYAT 75 + + EY Sbjct: 62 EDQKHYFDKAVEYYK 76 >gi|73670190|ref|YP_306205.1| hypothetical protein Mbar_A2721 [Methanosarcina barkeri str. Fusaro] gi|72397352|gb|AAZ71625.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 369 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +VV E CI C C+++CPV Y I P+ CI CG C CPV AI D E Sbjct: 189 PHVVEEKCIGC--QKCIKICPVGAPYLLGEVSMIDPNICISCGQCMEVCPVGAITIDWEH 246 Query: 62 GLELWLKINSEYA 74 + +L+ +EYA Sbjct: 247 DIPNFLECLTEYA 259 >gi|282883119|ref|ZP_06291718.1| Fe-hydrogenase large subunit family protein [Peptoniphilus lacrimalis 315-B] gi|281296931|gb|EFA89428.1| Fe-hydrogenase large subunit family protein [Peptoniphilus lacrimalis 315-B] Length = 505 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 31/60 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT NC C C+ VCPV+ G++ I D+CI CG C CP +AI P Sbjct: 112 SYFVTNNCRKCIAHPCINVCPVNAISMGKDSTIIDKDKCIRCGRCHEACPYNAIVMYDRP 171 >gi|320106410|ref|YP_004182000.1| iron-sulfur cluster-binding protein [Terriglobus saanensis SP1PR4] gi|319924931|gb|ADV82006.1| iron-sulfur cluster-binding protein [Terriglobus saanensis SP1PR4] Length = 86 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 42/84 (50%), Gaps = 10/84 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE--GEN------FLAIHPDECIDCGVCEPECPV 52 M YV+ E CI K T C + CPVDC + GE+ L I P ECIDCG C P CPV Sbjct: 1 MAYVIAEPCIGTKDTACADACPVDCIHPKKGEDGNEEAVQLFIDPVECIDCGACVPVCPV 60 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 AI D + + N+ + Sbjct: 61 SAIYAADDLPDKWAEFQEKNAAHF 84 >gi|288919073|ref|ZP_06413413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] gi|288349513|gb|EFC83750.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Frankia sp. EUN1f] Length = 113 Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 4/109 (3%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD- 58 M +V+T CI K C++ CP DC Y G + I+PDEC +CG C CPV A D Sbjct: 1 MPFVITSACIDVKDGACLDGGCPADCIYTGGRKMYINPDECTECGACALRCPVGAAMLDE 60 Query: 59 -TEPGLELWLKINS-EYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 + +++ ++ P P A G ++ + Sbjct: 61 MVPEEEQEFIRSEELFFSETLPGRDEPIGDDPGGAAKVGKIDADSEFVA 109 >gi|169628027|ref|YP_001701676.1| putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium abscessus ATCC 19977] gi|169239994|emb|CAM61022.1| Putative ferredoxin/ferredoxin--NADP reductase [Mycobacterium abscessus] Length = 539 Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSE 72 +C+ P + + L I C+DCG C CPVDAIKPD+ + +L+INSE Sbjct: 1 MNCIHPTPDEPDFLKAEMLHIDASACVDCGACVAACPVDAIKPDSTLKEEQLPFLRINSE 60 Query: 73 YATQ 76 + + Sbjct: 61 FYPR 64 >gi|300814458|ref|ZP_07094720.1| 4Fe-4S binding domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511428|gb|EFK38666.1| 4Fe-4S binding domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 505 Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 31/60 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT NC C C+ VCPV+ G++ I ++CI CG C CP +AI P Sbjct: 112 SYFVTNNCRKCIAHPCINVCPVNAISMGKDSTIIDKEKCIRCGRCHEACPYNAIVMYDRP 171 >gi|289675307|ref|ZP_06496197.1| ferredoxin I [Pseudomonas syringae pv. syringae FF5] Length = 48 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 40/48 (83%), Positives = 44/48 (91%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP 48 MT+VVT+NCI CK+TDCVEVCPVDCFYEG NFL IHPDECIDC +CEP Sbjct: 1 MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEP 48 >gi|329925765|ref|ZP_08280551.1| ferredoxin [Paenibacillus sp. HGF5] gi|328939645|gb|EGG35990.1| ferredoxin [Paenibacillus sp. HGF5] Length = 78 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTE 60 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI D Sbjct: 2 YVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAIYYFEDLP 61 Query: 61 PGLELWLKINSEYAT 75 + + EY Sbjct: 62 EDEKHYFDKAVEYYK 76 >gi|315647852|ref|ZP_07900953.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus vortex V453] gi|315276498|gb|EFU39841.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paenibacillus vortex V453] Length = 78 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTE 60 YV+ CI K +CV+VCPVDC EG++ I D CI CG CE CPV AI D Sbjct: 2 YVIGSACIEEKAGECVDVCPVDCIEEGDDQFYIDTDICISCGACEAACPVAAIFYFEDLP 61 Query: 61 PGLELWLKINSEYAT 75 + + EY Sbjct: 62 EEEKHYFDKAVEYYK 76 >gi|87312333|ref|ZP_01094428.1| ferredoxin [Blastopirellula marina DSM 3645] gi|87284955|gb|EAQ76894.1| ferredoxin [Blastopirellula marina DSM 3645] Length = 71 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNI 80 ++CFYEG+ L IHP+ECIDC C PECPV+AI + + ++++N+E A Q I Sbjct: 1 MECFYEGDKILYIHPEECIDCEACVPECPVEAIFHEDNVPEEWQGFIELNAEMAPQCEVI 60 Query: 81 TTKKESLPS 89 T KKE L Sbjct: 61 TEKKEPLVD 69 >gi|23336655|ref|ZP_00121861.1| COG1146: Ferredoxin [Bifidobacterium longum DJO10A] Length = 97 Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE-PGLELWLK 68 + K CV+ CPVDC YEG L I+P+EC+DCG CEP CP +AI + + P W K Sbjct: 1 MDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDDLPDEWAWYK 60 Query: 69 INS 71 + Sbjct: 61 DAA 63 >gi|313889048|ref|ZP_07822706.1| 4Fe-4S binding domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844921|gb|EFR32324.1| 4Fe-4S binding domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 501 Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y T+NC C C+ VCPV+ G++ I D+C+ CG C CP AI Sbjct: 112 AYYTTDNCRKCLAHPCINVCPVNAISMGKDRTIIDKDKCVRCGRCHDACPYSAI 165 >gi|306820054|ref|ZP_07453702.1| hydrogenase subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551832|gb|EFM39775.1| hydrogenase subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 503 Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 32/60 (53%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TY VT NC C C++VCPV+ G+ I ++CI CG C+ CP +AI P Sbjct: 114 TYRVTNNCRKCLAHPCIQVCPVNAISMGQYSTIIDEEKCIRCGRCKDNCPYNAIVFFDRP 173 >gi|323483907|ref|ZP_08089282.1| hypothetical protein HMPREF9474_01031 [Clostridium symbiosum WAL-14163] gi|323693503|ref|ZP_08107710.1| ferredoxin hydrogenase [Clostridium symbiosum WAL-14673] gi|323402745|gb|EGA95068.1| hypothetical protein HMPREF9474_01031 [Clostridium symbiosum WAL-14163] gi|323502460|gb|EGB18315.1| ferredoxin hydrogenase [Clostridium symbiosum WAL-14673] Length = 484 Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C CP G N I PD+C +CG C CP +AI P Sbjct: 94 SYTVTDNCRKCMGKACQSSCPFGAITMGNNKAFIDPDKCRECGKCATACPYNAIAHLERP 153 >gi|288869832|ref|ZP_06111989.2| Fe-hydrogenase large subunit family protein [Clostridium hathewayi DSM 13479] gi|288869437|gb|EFD01736.1| Fe-hydrogenase large subunit family protein [Clostridium hathewayi DSM 13479] Length = 491 Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I PD+C +CG C CP +AI T P Sbjct: 102 YVVTDNCQKCMGKACQNSCNFGAISMGHDRAYIDPDKCKECGKCSQACPYNAIADLTRP 160 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 Y+ + C C C + CPVD E+ + I +CI CG C Sbjct: 132 AYIDPDKCKECGKCSQACPYNAIADLTRPCKKSCPVDAITMDEDGIVVIDESKCIQCGAC 191 Query: 47 EPECPVDAI 55 CP AI Sbjct: 192 IHSCPFGAI 200 >gi|255602894|ref|XP_002537944.1| Ferredoxin 7Fe, putative [Ricinus communis] gi|223514472|gb|EEF24439.1| Ferredoxin 7Fe, putative [Ricinus communis] Length = 87 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 12/84 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+ CI CVE+CPV+C G N + I+PD CIDCG C CPV Sbjct: 1 MAYVIAAPCIA--DYSCVEICPVNCISPGPNEEEFDDAEQMYINPDVCIDCGACRDVCPV 58 Query: 53 DAIKPD--TEPGLELWLKINSEYA 74 AI + + + IN E+ Sbjct: 59 LAIYEEGCLPEKWKHYAGINKEFF 82 >gi|93006115|ref|YP_580552.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92393793|gb|ABE75068.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 67 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/60 (56%), Positives = 46/60 (76%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +++ +NCI CK+TDCV VC VD F+EG NFLAI P+ CIDC +C+PEC +AI P ++P Sbjct: 6 AFIIGDNCIKCKYTDCVAVCLVDAFFEGLNFLAIDPNSCIDCSLCDPECSANAITPVSKP 65 >gi|312144189|ref|YP_003995635.1| NADH dehydrogenase (quinone) [Halanaerobium sp. 'sapolanicus'] gi|311904840|gb|ADQ15281.1| NADH dehydrogenase (quinone) [Halanaerobium sp. 'sapolanicus'] Length = 600 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 TYV+T E+CI C C +VCPVD E + I D CI CG CEP CPVDAI Sbjct: 544 TYVITTEDCIGCG--KCAKVCPVDAISGEIKGIFEIDEDICIACGACEPVCPVDAI 597 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 CP + + I ++CI CG C CPVDAI + + E+ I Sbjct: 533 CPAGACQDLLSTYVITTEDCIGCGKCAKVCPVDAISGEIKGIFEIDEDI 581 >gi|302387727|ref|YP_003823549.1| Ferredoxin hydrogenase [Clostridium saccharolyticum WM1] gi|302198355|gb|ADL05926.1| Ferredoxin hydrogenase [Clostridium saccharolyticum WM1] Length = 483 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC LC C C + G + I PD+C +CG C CP +AI T P Sbjct: 94 YVVTDNCQLCMGKACQSSCNFNAISMGRDRAYIDPDKCKECGKCSQACPYNAIADLTRP 152 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 Y+ + C C C + CPVD EN + I +CI CG C Sbjct: 124 AYIDPDKCKECGKCSQACPYNAIADLTRPCKKSCPVDAITMDENGIVVIDESKCIQCGAC 183 Query: 47 EPECPVDAI 55 CP AI Sbjct: 184 IHGCPFGAI 192 >gi|260892247|ref|YP_003238344.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] gi|260864388|gb|ACX51494.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] Length = 629 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 YV+ E+C+ C C + CP E I PD C CG C CPV AI + G Sbjct: 561 YVIGEDCVQCGW--CRDTCPHGAILEKREGFYIEPDLCQRCGACLGVCPVGAIYLEAAGG 618 Query: 63 LELWLK 68 + W K Sbjct: 619 EKPWSK 624 >gi|150389480|ref|YP_001319529.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949342|gb|ABR47870.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 370 Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ CI C CVE CPVD + + I P+ CI CG C CP AI+ + Sbjct: 191 VMENLCIGC--QMCVENCPVDAIHMEDKKAVIDPEVCIGCGECITVCPKRAIEVQWKTDA 248 Query: 64 ELWLKINSEYA 74 ++++ +EYA Sbjct: 249 NIFVEKMAEYA 259 >gi|291165831|gb|EFE27878.1| Fe-hydrogenase large subunit family protein [Filifactor alocis ATCC 35896] Length = 498 Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT C C C++VCPV GE I ++CI CG C+ CP +AI P E Sbjct: 116 VTSTCRQCMAHPCIQVCPVGAITMGETQTHIDKEKCIKCGKCKEACPYNAIIQYDRPCAE 175 >gi|21228665|ref|NP_634587.1| ferredoxin [Methanosarcina mazei Go1] gi|20907167|gb|AAM32259.1| Ferredoxin [Methanosarcina mazei Go1] Length = 369 Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +VV E CI C +CVE+CPV + I+P CI CG C CP +AI + E Sbjct: 189 PHVVEEKCIGCG--NCVEICPVGAASLEGDVSRINPGVCISCGQCMEVCPENAIDLNWEQ 246 Query: 62 GLELWLKINSEYA 74 + +L+ +EYA Sbjct: 247 DIPEFLECMTEYA 259 >gi|148553514|ref|YP_001261096.1| cyclic nucleotide-binding protein [Sphingomonas wittichii RW1] gi|148498704|gb|ABQ66958.1| cyclic nucleotide-binding protein [Sphingomonas wittichii RW1] Length = 801 Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C C+H C+ CP + G++ D CI CG C+ CP I+ + EP + Sbjct: 662 VPTSCRHCEHPHCMADCPPTAIHRGQDGEVYIDDTCIGCGNCQRNCPYGVIRMEKEPPQK 721 Query: 65 L 65 Sbjct: 722 P 722 >gi|294146722|ref|YP_003559388.1| iron-sulfur protein [Sphingobium japonicum UT26S] gi|292677139|dbj|BAI98656.1| iron-sulfur protein [Sphingobium japonicum UT26S] Length = 837 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 23/109 (21%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT----E 60 V +C C+H C+ CP + + G + + CI CG C+ CP I+ D+ + Sbjct: 698 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFIDETCIGCGNCQRNCPYGVIRMDSVPPKK 757 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPG 109 PGL W+ + + P G K +Y + PG Sbjct: 758 PGLLSWMFLGA-------------GPGP------GEPSKKWRYKNAEPG 787 Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 11/28 (39%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPEC 50 + E + L I C+ C CE C Sbjct: 648 DNGIGEATDVLLIDEHLCVGCDNCEKAC 675 >gi|307265233|ref|ZP_07546791.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919677|gb|EFN49893.1| Ferredoxin hydrogenase [Thermoanaerobacter wiegelii Rt8.B1] Length = 513 Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + I D+CI+CG C+ CP +AI P Sbjct: 100 YRVTEACRGCLAHKCIEVCPRGAISIRDKRAHIDYDKCIECGRCKDVCPYNAISDTLRP 158 >gi|302562520|ref|ZP_07314862.1| ferredoxin-NADP reductase [Streptomyces griseoflavus Tu4000] gi|302480138|gb|EFL43231.1| ferredoxin-NADP reductase [Streptomyces griseoflavus Tu4000] Length = 519 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M + +T+ C C CV VCPV+C + L I P CIDCG C CP Sbjct: 1 MAFAITQTC--CNDATCVSVCPVNCIHPTPEERAFGSTEMLHIDPRSCIDCGACADACPA 58 Query: 53 DAIKPDTE--PGLELWLKINSEYAT 75 DAI P G ++ +IN+ Y Sbjct: 59 DAILPVDRLSEGQRVYERINAAYFE 83 >gi|160894561|ref|ZP_02075337.1| hypothetical protein CLOL250_02113 [Clostridium sp. L2-50] gi|156863872|gb|EDO57303.1| hypothetical protein CLOL250_02113 [Clostridium sp. L2-50] Length = 483 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGKACQAACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLVRP 152 >gi|229828064|ref|ZP_04454133.1| hypothetical protein GCWU000342_00113 [Shuttleworthia satelles DSM 14600] gi|229792658|gb|EEP28772.1| hypothetical protein GCWU000342_00113 [Shuttleworthia satelles DSM 14600] Length = 490 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TY VT+NC C C+ C EG+ + I P +C +CG C CP +AI T P Sbjct: 95 TYTVTDNCRFCLGKACINSCKFGAISEGDLRMHIDPAKCKECGQCAKNCPYEAIVHLTRP 154 >gi|297544478|ref|YP_003676780.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842253|gb|ADH60769.1| Ferredoxin hydrogenase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 506 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + I D+CI+CG C+ CP +AI P Sbjct: 100 YRVTEACRGCLAHKCIEVCPRGAISIRDKRAHIDYDKCIECGRCKDVCPYNAISDTLRP 158 >gi|310828126|ref|YP_003960483.1| hypothetical protein ELI_2538 [Eubacterium limosum KIST612] gi|308739860|gb|ADO37520.1| hypothetical protein ELI_2538 [Eubacterium limosum KIST612] Length = 506 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+NC C CV VCPV+ Y + I ++C+ CG C CP +AI P Sbjct: 113 AFMVTDNCRGCLAHPCVSVCPVNAVYMKDGKSHIDKEKCVRCGRCREACPYEAIVKYDRP 172 >gi|240171952|ref|ZP_04750611.1| putative NADPH:adrenodoxin oxidoreductase [Mycobacterium kansasii ATCC 12478] Length = 527 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPS 89 L I P C+DCG C CPV AI PD+ E +++IN+ Y + P LP Sbjct: 1 MLYIDPVACVDCGACVSACPVGAIAPDSRLESRQLPFVEINASYYPKRP----ADAKLPP 56 Query: 90 AAKMDGV 96 +K+ V Sbjct: 57 TSKLAPV 63 >gi|20092258|ref|NP_618333.1| hypothetical protein MA3446 [Methanosarcina acetivorans C2A] gi|19917495|gb|AAM06813.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 360 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +VV CI C CVE+CPV + I P CI CG C CP AI + E Sbjct: 180 PHVVEAKCIGCG--RCVEICPVGAASLEGDVSRIDPGICISCGQCMEVCPEGAIDINWEE 237 Query: 62 GLELWLKINSEYA 74 + +L+ +EYA Sbjct: 238 DIPEFLECLTEYA 250 >gi|28212003|ref|NP_782947.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] gi|28204446|gb|AAO36884.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] Length = 494 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVTE C C C+EVCP I+ + C +CG+CE CP +AI P Sbjct: 104 YVVTEACRGCLQHKCMEVCPAGSINRAAGKAYINHETCKECGLCESACPYNAIAEVMRP 162 >gi|302391064|ref|YP_003826884.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] gi|302203141|gb|ADL11819.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] Length = 600 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 6/56 (10%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 YV+ E+CI C T CV+VCPVD EGE I DECI+CG C ECPVDAI Sbjct: 545 YVIDEEDCIGC--TSCVDVCPVDAI-EGEKKEAHVIDTDECINCGSCVDECPVDAI 597 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 20/45 (44%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E CP E I ++CI C C CPVDAI+ + + Sbjct: 531 ETCPAGNCQELVAGYVIDEEDCIGCTSCVDVCPVDAIEGEKKEAH 575 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEG 29 +V+ T+ CI C CV+ CPVD + Sbjct: 574 AHVIDTDECINCG--SCVDECPVDAISQA 600 >gi|160947614|ref|ZP_02094781.1| hypothetical protein PEPMIC_01549 [Parvimonas micra ATCC 33270] gi|158446748|gb|EDP23743.1| hypothetical protein PEPMIC_01549 [Parvimonas micra ATCC 33270] Length = 531 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + +T+ C+ C T C + CPVDC + L I P +CI CG CE CPV+AI Sbjct: 477 FFITDKCVGC--TKCAKACPVDCITGVQKELHVIDPSKCIKCGSCEAACPVNAI 528 >gi|87198326|ref|YP_495583.1| cyclic nucleotide-binding domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|87134007|gb|ABD24749.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Novosphingobium aromaticivorans DSM 12444] Length = 858 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C C+H C+ CP + + G + D CI CG C+ CP I+ D P + Sbjct: 712 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFINDTCIGCGNCQRNCPYGVIRMDKVPPKK 771 Query: 65 L 65 Sbjct: 772 P 772 >gi|295094467|emb|CBK83558.1| Iron only hydrogenase large subunit, C-terminal domain [Coprococcus sp. ART55/1] Length = 484 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C + C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGRACQQACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLMRP 152 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 15 TDCVEVCPVDCFYEGENFL---AIHPDECIDCGVCEPECPVDAI 55 C++ CPV EN I D+CIDCG C +CP AI Sbjct: 151 RPCIKSCPVGAISVAENGTGIAVIDKDKCIDCGSCIHKCPFGAI 194 >gi|163814709|ref|ZP_02206098.1| hypothetical protein COPEUT_00860 [Coprococcus eutactus ATCC 27759] gi|158450344|gb|EDP27339.1| hypothetical protein COPEUT_00860 [Coprococcus eutactus ATCC 27759] Length = 484 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C + C G + I P +C +CG C CP +AI P Sbjct: 94 YVVTDNCQKCMGRACQQACRFGAISMGRDKSYIDPSKCKECGQCAKACPYNAIADLMRP 152 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 15 TDCVEVCPVDCFYEGENFL---AIHPDECIDCGVCEPECPVDAI 55 C++ CPV EN I D+CIDCG C +CP AI Sbjct: 151 RPCIKSCPVGAISVAENGTGIAVIDKDKCIDCGSCIHKCPFGAI 194 >gi|20807413|ref|NP_622584.1| ferredoxin 3 [Thermoanaerobacter tengcongensis MB4] gi|20515935|gb|AAM24188.1| Ferredoxin 3 [Thermoanaerobacter tengcongensis MB4] Length = 74 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + +TE CI C C CPVD YEG+ I P++CIDCG CE CP AIK + Sbjct: 20 AHYITEECISCG--ACAAECPVDAIYEGDGKYEIDPEKCIDCGACEAVCPTGAIKAE 74 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 18/34 (52%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + EG N +ECI CG C ECPVDAI Sbjct: 13 YKEGRNVAHYITEECISCGACAAECPVDAIYEGD 46 >gi|149176958|ref|ZP_01855567.1| ferredoxin [Planctomyces maris DSM 8797] gi|148844213|gb|EDL58567.1| ferredoxin [Planctomyces maris DSM 8797] Length = 61 Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNITTKKESLPS 89 + I+PDECIDC C PECPV+AI + + + +IN++ + + P IT KKE L Sbjct: 1 MVYINPDECIDCEACVPECPVEAIFHEDNVPEKWQEYTQINADKSQELPVITEKKEPLAD 60 >gi|225405722|ref|ZP_03760911.1| hypothetical protein CLOSTASPAR_04943 [Clostridium asparagiforme DSM 15981] gi|225042746|gb|EEG52992.1| hypothetical protein CLOSTASPAR_04943 [Clostridium asparagiforme DSM 15981] Length = 484 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+NC C C C G + I P +C CG C CP +AI P Sbjct: 93 AYVVTDNCQKCMGKACQNSCNFGAISMGRDRAYIDPAKCKSCGKCSQACPYNAIAHLERP 152 >gi|313898382|ref|ZP_07831919.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] gi|312956764|gb|EFR38395.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] Length = 504 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T VVT+ C C C EVCP D I ++CI CG C CP AI P Sbjct: 113 TVVVTDTCQGCLAHPCKEVCPKDAISMVNGKSYIDQEKCIKCGRCMDVCPYGAINKLERP 172 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C++VCP + E I D+C+ CG Sbjct: 144 SYIDQEKCIKCG--RCMDVCPYGAINKLERPCARSCGMDAITSDELGRAEIDYDKCVSCG 201 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 202 MCLVNCPFGAI 212 >gi|309775984|ref|ZP_07670976.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916266|gb|EFP62014.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 504 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T VVT+ C C C EVCP D I ++CI CG C CP AI P Sbjct: 113 TVVVTDTCQGCLAHPCKEVCPKDAISMVNGKSYIDQEKCIKCGRCMDVCPYGAINKLERP 172 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C++VCP + E I D+C+ CG Sbjct: 144 SYIDQEKCIKCG--RCMDVCPYGAINKLERPCARSCGMDAITSDELGRAEIDYDKCVSCG 201 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 202 MCLVNCPFGAI 212 >gi|304317899|ref|YP_003853044.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779401|gb|ADL69960.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 372 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +NC C C++ CP D + I PD+CI CG C C DAIKP ++ Sbjct: 191 VGKNCTAC--QTCIKNCPEDAITLVDGKAYIDPDKCIGCGECITMCQYDAIKPQWGTDMD 248 Query: 65 LWLKINSEYA 74 +++ +EYA Sbjct: 249 EFVERMTEYA 258 >gi|307297192|ref|ZP_07577004.1| cyclic nucleotide-binding protein [Sphingobium chlorophenolicum L-1] gi|306877363|gb|EFN08595.1| cyclic nucleotide-binding protein [Sphingobium chlorophenolicum L-1] Length = 841 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C C+H C+ CP + + G + + CI CG C+ CP I+ D+ P + Sbjct: 702 VPTSCRHCEHPHCMADCPPNAIHRGPDGEVFIDETCIGCGNCQRNCPYGVIRMDSVPPKK 761 Query: 65 L 65 Sbjct: 762 P 762 Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 11/28 (39%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPEC 50 + E + L I C+ C CE C Sbjct: 652 DNGIGEATDVLLIDEHLCVGCDNCEKAC 679 >gi|254490549|ref|ZP_05103735.1| hypothetical protein MDMS009_881 [Methylophaga thiooxidans DMS010] gi|224464293|gb|EEF80556.1| hypothetical protein MDMS009_881 [Methylophaga thiooxydans DMS010] Length = 63 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 45 VCEPECPVDAIKPDTEPGLEL--WLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 +CEPECP +AI + + E +L+IN E + WP I+ KK+ LP A + DG K Sbjct: 1 MCEPECPAEAIFSEDDLPDEQMEFLQINEELSQVWPVISEKKDPLPDAEEWDGKSDK 57 >gi|167630654|ref|YP_001681153.1| ferredoxin (4fe-4s) domain, putative iron-only hydrogenase [Heliobacterium modesticaldum Ice1] gi|167593394|gb|ABZ85142.1| ferredoxin (4fe-4s) domain, putative iron-only hydrogenase [Heliobacterium modesticaldum Ice1] Length = 484 Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+E CPV + I+ ++CI+CG C CP AI P Sbjct: 93 FTVTEACRGCIAHPCMEACPVGAISQINRRAIINQEKCIECGRCRQACPYGAITDTQRP 151 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 15/66 (22%) Query: 7 ENCILCK--------------HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C++ CPV E+ LA I +CI+CG C CP Sbjct: 128 EKCIECGRCRQACPYGAITDTQRPCIKACPVKAISYSEDKLATIDQKKCINCGQCAYRCP 187 Query: 52 VDAIKP 57 AI Sbjct: 188 FGAISD 193 >gi|154498692|ref|ZP_02037070.1| hypothetical protein BACCAP_02683 [Bacteroides capillosus ATCC 29799] gi|150272431|gb|EDM99625.1| hypothetical protein BACCAP_02683 [Bacteroides capillosus ATCC 29799] Length = 73 Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +C+ C C CPV +G+ I D CIDCG C CPV AI Sbjct: 18 MAYVIGNDCVSCG--SCEGACPVSAISQGDEHYVIDADTCIDCGTCAETCPVGAI 70 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + ++C+ CG CE CPV AI E Sbjct: 18 MAYVIGNDCVSCGSCEGACPVSAISQGDEH 47 >gi|309389842|gb|ADO77722.1| Ferredoxin hydrogenase [Halanaerobium praevalens DSM 2228] Length = 471 Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+VT+ C C CV CPVD +N I +CI+CG C C +AI + P Sbjct: 111 YIVTDACRNCVAHKCVNACPVDAIVIIQNKAYIDQHKCIECGKCAKTCSYNAILENQRP 169 >gi|253996419|ref|YP_003048483.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8] gi|253983098|gb|ACT47956.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8] Length = 824 Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP---DTEP 61 V +C C+H C++ CP D + + D CI CG C+ CP D I+ +P Sbjct: 688 VPTSCRHCEHPHCMKDCPPDAIHRAPHGEVYIDDSCIGCGNCQQNCPYDVIQMAVIQDQP 747 Query: 62 GLELW 66 LW Sbjct: 748 EQSLW 752 >gi|309390025|gb|ADO77905.1| Ferredoxin hydrogenase [Halanaerobium praevalens DSM 2228] Length = 501 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + VT NC C C VCPVD E I ++CI+CG C+ CP +AI Sbjct: 115 AHFVTNNCRKCLAHPCSIVCPVDAITIEEKAAVIDQEKCINCGKCKKACPYEAI 168 >gi|167770016|ref|ZP_02442069.1| hypothetical protein ANACOL_01358 [Anaerotruncus colihominis DSM 17241] gi|167667850|gb|EDS11980.1| hypothetical protein ANACOL_01358 [Anaerotruncus colihominis DSM 17241] Length = 70 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ + C+ C C + CPV EG+ I P CI+CG C +CP +AIKP+ Sbjct: 15 MAYVIGDACVSCG--ACKDTCPVGAISEGDGKYEIDPSACIECGACAADCPSEAIKPE 70 >gi|239628141|ref|ZP_04671172.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518287|gb|EEQ58153.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 483 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y+VT+NC C C C G I P +C +CG C CP +AI P Sbjct: 93 SYIVTDNCRKCMGKACQNSCNFGAISMGRERAYIDPAKCKECGKCSQACPYNAIAHLERP 152 >gi|315925580|ref|ZP_07921790.1| Fe-hydrogenase large subunit family protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621121|gb|EFV01092.1| Fe-hydrogenase large subunit family protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 493 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT+NC C C+ C + GE I ++C +CG+C CP +AI P Sbjct: 92 SYVVTDNCQNCLGKACLSACRFGAIHPGEKRSRIDANKCRECGMCATACPYNAIAHLVRP 151 >gi|225175870|ref|ZP_03729863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168794|gb|EEG77595.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 57 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 MT+V+ E CI C C CPVD EG++ I P+ CIDCG C CPVDAI ++ Sbjct: 1 MTHVINEECISCG--SCEPECPVDAITEGDDKYVIDPETCIDCGACAEVCPVDAIHEES 57 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 18/29 (62%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +ECI CG CEPECPVDAI + Sbjct: 1 MTHVINEECISCGSCEPECPVDAITEGDD 29 >gi|187932652|ref|YP_001884615.1| iron-dependent hydrogenase [Clostridium botulinum B str. Eklund 17B] gi|187720805|gb|ACD22026.1| iron-dependent hydrogenase [Clostridium botulinum B str. Eklund 17B] Length = 494 Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C VC E I PD+C +CG+C+ CP DAI D P Sbjct: 106 VTDACRNCIAHKCQSVCNFGAITYVEGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 >gi|293401032|ref|ZP_06645177.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306058|gb|EFE47302.1| Fe-hydrogenase large subunit family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 504 Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 25/58 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VVT+ C C C EVCP D I D+CI CG C CP AI P Sbjct: 115 VVTDTCQGCLAHPCKEVCPKDAISIINGKSVIDQDKCIKCGRCMDVCPYGAINKLERP 172 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 + CI C C++VCP + E I ++C+ CG+C Sbjct: 149 DKCIKCG--RCMDVCPYGAINKLERPCARSCGMDAIKSDEFGRAEIDHEKCVSCGMCLVN 206 Query: 50 CPVDAI 55 CP AI Sbjct: 207 CPFGAI 212 >gi|291519873|emb|CBK75094.1| Iron only hydrogenase large subunit, C-terminal domain [Butyrivibrio fibrisolvens 16/4] Length = 492 Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C+ C GE + I P +C +CG+C ECP AI P Sbjct: 95 SYSVTDNCRFCLGKACLNSCKFGAITPGERRMHIDPTKCKECGMCAKECPYQAIVHLERP 154 >gi|169333814|ref|ZP_02861007.1| hypothetical protein ANASTE_00200 [Anaerofustis stercorihominis DSM 17244] gi|169259379|gb|EDS73345.1| hypothetical protein ANASTE_00200 [Anaerofustis stercorihominis DSM 17244] Length = 505 Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 29/60 (48%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T VT NC C C EVCPVD Y I+ D+C+ CG C CP +AI P Sbjct: 110 TVFVTNNCRGCYAHPCSEVCPVDAVYFENGKSVINKDKCVRCGRCVEACPYNAIVKFDRP 169 >gi|291535976|emb|CBL09088.1| Iron only hydrogenase large subunit, C-terminal domain [Roseburia intestinalis M50/1] Length = 482 Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|238917328|ref|YP_002930845.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750] gi|238872688|gb|ACR72398.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750] Length = 489 Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+VT+NC C C + C + I PD+C +CG+C CP +AI P Sbjct: 97 YIVTDNCRKCMMKACQQACKFGAVSMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRP 155 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 15/74 (20%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 Y+ + C C C ++CP + EN + I ++CI CG C Sbjct: 127 AYIDPDKCKECGMCAKACPYNAIADLIRPCKKICPANAITMDENGICEIDENKCIQCGQC 186 Query: 47 EPECPVDAIKPDTE 60 CP AI T+ Sbjct: 187 IHACPFGAIGSKTD 200 >gi|29347824|ref|NP_811327.1| ferredoxin [Bacteroides thetaiotaomicron VPI-5482] gi|29339726|gb|AAO77521.1| ferredoxin [Bacteroides thetaiotaomicron VPI-5482] Length = 76 Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV+ EG + +I+PD C DCG C CP +AI P Sbjct: 21 MAYVISDDCIACG--TCIDECPVEAISEG-DIYSINPDVCTDCGTCADVCPSEAIHP 74 >gi|251780311|ref|ZP_04823231.1| iron-dependent hydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084626|gb|EES50516.1| iron-dependent hydrogenase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 494 Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C VC + I PD+C +CG+C+ CP DAI D P Sbjct: 106 VTDACRNCIAHKCQSVCNFGAITYVDGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-----------------ENFLAIHPDECIDCG 44 Y+ + C C C + CP D E + I ++C++CG Sbjct: 134 AYIDPDKCKECG--MCKKACPYDAIAEDMRPCKRSCPTGALDINSDKRAMIKQEKCVNCG 191 Query: 45 VCEPECPVDAIKP 57 C CP A++ Sbjct: 192 ACMAACPFGALED 204 >gi|188587767|ref|YP_001919801.1| iron-dependent hydrogenase [Clostridium botulinum E3 str. Alaska E43] gi|188498048|gb|ACD51184.1| iron-dependent hydrogenase [Clostridium botulinum E3 str. Alaska E43] Length = 494 Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C VC + I PD+C +CG+C+ CP DAI D P Sbjct: 106 VTDACRNCIAHKCQSVCNFGAITYVDGKAYIDPDKCKECGMCKKACPYDAIAEDMRP 162 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG-----------------ENFLAIHPDECIDCG 44 Y+ + C C C + CP D E + I ++C++CG Sbjct: 134 AYIDPDKCKECG--MCKKACPYDAIAEDMRPCKRSCPTGALDINSDKRAMIKQEKCVNCG 191 Query: 45 VCEPECPVDAIKP 57 C CP A++ Sbjct: 192 ACMAACPFGALED 204 >gi|160933096|ref|ZP_02080485.1| hypothetical protein CLOLEP_01939 [Clostridium leptum DSM 753] gi|156868170|gb|EDO61542.1| hypothetical protein CLOLEP_01939 [Clostridium leptum DSM 753] Length = 546 Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT NC C CV CP + I P +C +CG C CP +AI P Sbjct: 160 FTVTANCQRCMAKKCVAACPFGAITVTGSGAYIDPAKCKECGRCAAACPYNAISDTMRP 218 >gi|309389874|gb|ADO77754.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Halanaerobium praevalens DSM 2228] Length = 601 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 4/55 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++ E CI C + C +VCPVD E +N I PD CI CG CEPECPVDAI Sbjct: 546 YIIDEEACIGC--SKCSKVCPVDAISGEIKNPFKIDPDVCIACGACEPECPVDAI 598 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 21 CPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP C ++ I + CI C C CPVDAI + + + Sbjct: 533 CPAGVCDELTSDYYIIDEEACIGCSKCSKVCPVDAISGEIKNPFK 577 >gi|153812810|ref|ZP_01965478.1| hypothetical protein RUMOBE_03217 [Ruminococcus obeum ATCC 29174] gi|149831170|gb|EDM86259.1| hypothetical protein RUMOBE_03217 [Ruminococcus obeum ATCC 29174] Length = 501 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+V+ C C C++ CP + I D+CI CG C+ CP DAI + P Sbjct: 115 YIVSNMCRGCVAHPCMQACPKGAISMKDGKSYIDQDKCIKCGKCKAACPYDAISHNIRP 173 >gi|291538469|emb|CBL11580.1| Iron only hydrogenase large subunit, C-terminal domain [Roseburia intestinalis XB6B4] Length = 482 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|149920538|ref|ZP_01909005.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] gi|149818582|gb|EDM78028.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] Length = 573 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 T+ VT C C + CV +CPV Y+ ++ + D CI C C CP DAI D + Sbjct: 51 TFQVT-RCNHCANPPCVRICPVTAMYQRDDGIVEFDKDACIGCKACMQACPYDAIHIDPD 109 Query: 61 PG 62 G Sbjct: 110 TG 111 >gi|302670217|ref|YP_003830177.1| iron-only hydrogenase [Butyrivibrio proteoclasticus B316] gi|302394690|gb|ADL33595.1| iron-only hydrogenase [Butyrivibrio proteoclasticus B316] Length = 490 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+NC C C+ C G+ + I P +C +CG C CP AI P Sbjct: 95 AYSVTDNCRFCMGKACLNSCAFGAISPGDTHMHIDPAKCKECGKCAAACPYSAIVHLERP 154 >gi|167037823|ref|YP_001665401.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040723|ref|YP_001663708.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X514] gi|256752156|ref|ZP_05493022.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914762|ref|ZP_07132078.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307724004|ref|YP_003903755.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter sp. X513] gi|320116240|ref|YP_004186399.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854963|gb|ABY93372.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter sp. X514] gi|166856657|gb|ABY95065.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748970|gb|EEU62008.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889697|gb|EFK84843.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307581065|gb|ADN54464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X513] gi|319929331|gb|ADV80016.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 56 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP AIK + Sbjct: 1 MAHYITDECISCG--ACTAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAIKAE 56 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 14/22 (63%), Positives = 14/22 (63%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 DECI CG C ECPVDAI Sbjct: 7 DECISCGACTAECPVDAIHEGD 28 >gi|188585464|ref|YP_001917009.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350151|gb|ACB84421.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 482 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV+TE C C CV CPV ++ I +CI+CG C+ CP +AI P Sbjct: 89 YVITEACRGCLANHCVSYCPVGAIEFVQHKAKIDGQKCIECGKCKDACPYNAIVDVMRP 147 >gi|14250934|emb|CAC39230.1| HymB protein [Eubacterium acidaminophilum] Length = 597 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C VCPV + I D+CI CG C CPV+AI Sbjct: 543 YFITDKCIGC--TKCARVCPVTAISGKVKEKHVIDTDKCIKCGACMDACPVNAI 594 >gi|307266903|ref|ZP_07548422.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|326389885|ref|ZP_08211449.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|306918060|gb|EFN48315.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|325994153|gb|EGD52581.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 56 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP AIK + Sbjct: 1 MAHYITDECISCG--ACAAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAIKAE 56 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 14/22 (63%), Positives = 14/22 (63%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 DECI CG C ECPVDAI Sbjct: 7 DECISCGACAAECPVDAIHEGD 28 >gi|317497525|ref|ZP_07955844.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895208|gb|EFV17371.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 495 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V E C C C+EVCP + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGEQCQGCMAHPCMEVCPKKAISFKDGYSYIDQEKCIKCGQCKKVCPYGAIYERKRP 171 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C +VCP YE + A I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CKKVCPYGAIYERKRPCANACGVGAIETDYAGRAKINPDKCVSCG 200 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 201 MCMVNCPFGAI 211 >gi|304317218|ref|YP_003852363.1| ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778720|gb|ADL69279.1| Ferredoxin hydrogenase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 504 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP + I D+CI+CG C+ CP +AI + P Sbjct: 100 YRVTEACRGCITHRCTEVCPKGAISIIDRKSHIDYDKCIECGRCKEACPYNAISDNLRP 158 >gi|149176045|ref|ZP_01854662.1| ferredoxin [Planctomyces maris DSM 8797] gi|148845199|gb|EDL59545.1| ferredoxin [Planctomyces maris DSM 8797] Length = 59 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWPNITTKKESL 87 L I P+ECIDC C ECPV+AI + +++IN+E A + P IT +K L Sbjct: 1 MLYIDPEECIDCDACRTECPVNAIFYEDDVPDQWREYIQINAEMAAKTPPITERKAPL 58 >gi|167766696|ref|ZP_02438749.1| hypothetical protein CLOSS21_01202 [Clostridium sp. SS2/1] gi|167711633|gb|EDS22212.1| hypothetical protein CLOSS21_01202 [Clostridium sp. SS2/1] gi|291558362|emb|CBL37162.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 495 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V E C C C+EVCP + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGEQCQGCMAHPCMEVCPKKAISFKDGYSYIDQEKCIKCGQCKKVCPYGAIYERKRP 171 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ E CI C C +VCP YE + A I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CKKVCPYGAIYERKRPCANACGVGAIETDYAGRAKINPDKCVSCG 200 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 201 MCMVNCPFGAI 211 >gi|167758102|ref|ZP_02430229.1| hypothetical protein CLOSCI_00440 [Clostridium scindens ATCC 35704] gi|167663999|gb|EDS08129.1| hypothetical protein CLOSCI_00440 [Clostridium scindens ATCC 35704] Length = 503 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 28/62 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y V+ C C C+EVCP D I D+CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCIEVCPKDAISMVGGKSYIDQDKCIKCGKCKSVCPYDAISKKERPC 176 Query: 63 LE 64 + Sbjct: 177 QK 178 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF---------------YEGENF--LAIHPDECIDCG 44 +Y+ + CI C C VCP D E +N I+ D+C+ CG Sbjct: 147 SYIDQDKCIKCG--KCKSVCPYDAISKKERPCQKACGVGAIESDNMGRAHINNDKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVSCPFGAISD 217 >gi|167629699|ref|YP_001680198.1| ferridoxin/ hydrogenase, putative [Heliobacterium modesticaldum Ice1] gi|167592439|gb|ABZ84187.1| ferridoxin/ hydrogenase, putative [Heliobacterium modesticaldum Ice1] Length = 493 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 26/53 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + VT C C C+E CPVD + I+ +CI+CG C CP AI Sbjct: 110 FTVTGACRGCITHRCIEACPVDAIAQINRLAYINQQKCIECGRCHQVCPYGAI 162 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 15/72 (20%) Query: 1 MTYVVTENCILCK--------------HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGV 45 + Y+ + CI C C++ CPV GE+ +A I P++C+ CG Sbjct: 139 LAYINQQKCIECGRCHQVCPYGAITDMQRPCIKACPVKAIQYGEDKIARIDPNKCVSCGH 198 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 199 CAVSCPFGAISD 210 >gi|295110160|emb|CBL24113.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus obeum A2-162] Length = 501 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+V+ C C C++ CP + I D+CI CG C+ CP DAI + P Sbjct: 115 YIVSNMCRGCVAHPCMQACPKGAISMKDGKSYIDQDKCIKCGKCKASCPYDAISHNVRP 173 >gi|218780897|ref|YP_002432215.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762281|gb|ACL04747.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 363 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%) Query: 3 YVV---TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YVV E CI C CVE CP+D F EGE+ +++ P CI CG+C CP +A+ + Sbjct: 272 YVVQFNEEECINCG--TCVERCPMDAFTEGEDVISVDPGRCIGCGLCTTTCPTEALSLEI 329 Query: 60 EPGLE 64 +P + Sbjct: 330 QPEEK 334 >gi|85710648|ref|ZP_01041712.1| putative oxidoreductase, Fe-S subunit [Erythrobacter sp. NAP1] gi|85687826|gb|EAQ27831.1| putative oxidoreductase, Fe-S subunit [Erythrobacter sp. NAP1] Length = 808 Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V +C C+H C+ CP + G + I+ + CI CG C+ CP I+ D P Sbjct: 669 VPTSCRHCEHPHCMADCPPNAIQRGPDGEVSINAETCIGCGNCKSNCPYGVIRMDPVPPK 728 Query: 64 EL 65 + Sbjct: 729 KP 730 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDA 54 E + L I CI C CE C DA Sbjct: 622 IGEATDALLIDEKLCIGCDNCERAC-ADA 649 >gi|240145814|ref|ZP_04744415.1| periplasmic [Fe] hydrogenase 1 [Roseburia intestinalis L1-82] gi|257202092|gb|EEV00377.1| periplasmic [Fe] hydrogenase 1 [Roseburia intestinalis L1-82] Length = 348 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C CV C G + I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACVNACKFGAIEPGRDRSHIDPSKCKECGRCAQACPYNAIAHLKRP 151 >gi|304439876|ref|ZP_07399770.1| periplasmic hydrogenase 1 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371615|gb|EFM25227.1| periplasmic hydrogenase 1 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 501 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C VCPV+ G++ I D+C+ CG C+ CP AI P Sbjct: 115 VTDNCRRCMAHPCTNVCPVNAVKIGKHRAEIDHDKCVKCGRCKDTCPYHAIVDFDRP 171 >gi|118467237|ref|YP_884190.1| NADPH-ferredoxin reductase fpra [Mycobacterium avium 104] gi|118168524|gb|ABK69421.1| NADPH-ferredoxin reductase fpra [Mycobacterium avium 104] Length = 511 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWP 78 L I P C+DCG C CPVDAI+ + E + IN+ Y P Sbjct: 11 MLYIDPQACVDCGACVEVCPVDAIRHEDELTDEQARFKDINAAYFAAQP 59 >gi|257784216|ref|YP_003179433.1| Ferredoxin hydrogenase [Atopobium parvulum DSM 20469] gi|257472723|gb|ACV50842.1| Ferredoxin hydrogenase [Atopobium parvulum DSM 20469] Length = 531 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C E+CP + + I ++CI CG+C CP AI P Sbjct: 123 YRVTNACQGCLAHPCREICPKEAISFVDKKAYIDQEKCIQCGMCFKVCPYQAIHHHVRP 181 >gi|317497055|ref|ZP_07955382.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895600|gb|EFV17755.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 481 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT NC C DC++ C G I P +C +CG+C CP +AI + P Sbjct: 92 SYVVTNNCQNCLGKDCIKACRFGAIEPGHTRSRIDPQKCKECGMCAKACPYNAIAHVSRP 151 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C + CPVD E + I ++CI CG C +CP AI Sbjct: 150 RPCKDSCPVDAISYDEYGVSVIDEEKCIRCGQCAAKCPFGAI 191 >gi|167767746|ref|ZP_02439799.1| hypothetical protein CLOSS21_02281 [Clostridium sp. SS2/1] gi|167710485|gb|EDS21064.1| hypothetical protein CLOSS21_02281 [Clostridium sp. SS2/1] gi|291558899|emb|CBL37699.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 481 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +YVVT NC C DC++ C G I P +C +CG+C CP +AI + P Sbjct: 92 SYVVTNNCQNCLGKDCIKACRFGAIEPGHTRSRIDPQKCKECGMCAKACPYNAIAHVSRP 151 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C + CPVD E + I ++CI CG C +CP AI Sbjct: 150 RPCKDSCPVDAISYDEYGVSVIDEEKCIRCGQCAAKCPFGAI 191 >gi|149927499|ref|ZP_01915753.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Limnobacter sp. MED105] gi|149823772|gb|EDM82998.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Limnobacter sp. MED105] Length = 820 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C C+ C++ CP D E + D CI CG C CP +AI+ +P Sbjct: 693 SCRHCEQPHCMKDCPPDAIRRNEKGEVMIADTCIGCGNCAKNCPYNAIELRVKPPPRK 750 >gi|219847452|ref|YP_002461885.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541711|gb|ACL23449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 559 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 + VT C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 53 FQVT-RCNHCANPPCVRICPVTAMYQRTDGIVEFDPKVCIGCKACMQACPYDAIYIDPE 110 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 23/61 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPVDA 54 CI CK C++ CP D I P+ +C C CE CP A Sbjct: 90 CIGCK--ACMQACPYDAI-------YIDPETHNAAKCHFCAHRIDQGLKPACEIVCPEQA 140 Query: 55 I 55 I Sbjct: 141 I 141 >gi|150391799|ref|YP_001321848.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149951661|gb|ABR50189.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 596 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 5/55 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 YV+T++C C T CV+ CPVD + GE I+ D CI CG C +CP AI Sbjct: 542 YVITDDCKGC--TLCVKACPVDAIH-GERKAVHLINTDTCIKCGACVDKCPFKAI 593 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEP 61 + D+C C +C CPVDAI + + Sbjct: 542 YVITDDCKGCTLCVKACPVDAIHGERKA 569 >gi|299143936|ref|ZP_07037016.1| Fe-hydrogenase large subunit family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518421|gb|EFI42160.1| Fe-hydrogenase large subunit family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 498 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 29/60 (48%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 TY VT+NC C C VCPV+ N I +CI CG C+ CP +AI P Sbjct: 112 TYYVTDNCRKCMAHPCTNVCPVNAVTIERNRAHIDTTKCIKCGRCKETCPYNAIVMYDRP 171 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 25/74 (33%), Gaps = 15/74 (20%) Query: 2 TYVVTENCILCK--------------HTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVC 46 ++ T CI C C C V+ E I DEC+ CG C Sbjct: 143 AHIDTTKCIKCGRCKETCPYNAIVMYDRPCAAACGVNAIGSDEYGRAEIDHDECVACGRC 202 Query: 47 EPECPVDAIKPDTE 60 CP AI T+ Sbjct: 203 IASCPFGAIADKTQ 216 >gi|126178175|ref|YP_001046140.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125860969|gb|ABN56158.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoculleus marisnigri JR1] Length = 367 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV E C C C VCP + ++P+ C+ CG C CP AI+ D Sbjct: 187 PYVEIERCGGCG--KCTTVCPQAAMTLADGRAVLNPEHCVGCGDCMRACPEGAIEFDWTT 244 Query: 62 GLELWLKINSEYA 74 + +++ EYA Sbjct: 245 EIRPFIERLCEYA 257 >gi|160940737|ref|ZP_02088079.1| hypothetical protein CLOBOL_05631 [Clostridium bolteae ATCC BAA-613] gi|158436257|gb|EDP14024.1| hypothetical protein CLOBOL_05631 [Clostridium bolteae ATCC BAA-613] Length = 505 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y+VT+NC C C C G I P +C +CG C CP +AI P Sbjct: 115 SYIVTDNCRKCMGKACQNSCNFGAISMGRERAYIEPGKCKECGKCSQACPYNAIAHLERP 174 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C ++CPVD E + I +CI CG C CP AI Sbjct: 173 RPCKKICPVDAITYDEYGICVIDEKKCIQCGACIHSCPFGAI 214 >gi|297538314|ref|YP_003674083.1| cyclic nucleotide-binding protein [Methylotenera sp. 301] gi|297257661|gb|ADI29506.1| cyclic nucleotide-binding protein [Methylotenera sp. 301] Length = 833 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP---DTEP 61 V +C C+H C++ CP D + + D CI CG C+ CP D I+ +P Sbjct: 693 VPTSCRHCEHPHCMKDCPPDAIHRAPHGEVYIDDSCIGCGNCQQNCPYDVIQMAVIQDQP 752 Query: 62 GLELW 66 +W Sbjct: 753 ERSIW 757 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 28 EGENFLAIHPDECIDCGVCEPEC 50 E + L I C+ C CE C Sbjct: 648 EATDVLLIDESLCVRCNYCEDAC 670 >gi|156742145|ref|YP_001432274.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] gi|156233473|gb|ABU58256.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] Length = 565 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 + VT C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 53 FQVT-RCNHCANPPCVRICPVTAMYQRADGIVEFDPKACIGCKACLQACPYDAIYIDPE 110 >gi|309776276|ref|ZP_07671265.1| periplasmic [Fe] hydrogenase 1 [Erysipelotrichaceae bacterium 3_1_53] gi|308915956|gb|EFP61707.1| periplasmic [Fe] hydrogenase 1 [Erysipelotrichaceae bacterium 3_1_53] Length = 482 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + GE+ I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGEDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 15 TDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C++ CPVD GE+ LA I +CI+CG C+ +CP AI+ Sbjct: 155 RPCMKSCPVDAIRMGEDGLAKIDEAKCINCGACQAKCPFGAIED 198 >gi|225016098|ref|ZP_03705331.1| hypothetical protein CLOSTMETH_00042 [Clostridium methylpentosum DSM 5476] gi|224951095|gb|EEG32304.1| hypothetical protein CLOSTMETH_00042 [Clostridium methylpentosum DSM 5476] Length = 490 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C++ CP + I +C +CG C CP +AI P Sbjct: 102 TVTQNCRGCLAKKCIKACPFGAISTSDGHAVIDKKKCRECGKCVAACPYNAIVDIERP 159 >gi|313897910|ref|ZP_07831451.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] gi|312957445|gb|EFR39072.1| 4Fe-4S binding domain protein [Clostridium sp. HGF2] Length = 482 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + GE+ I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGEDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 15 TDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C++ CPVD GE+ LA I +CI+CG C+ +CP AI+ Sbjct: 155 RPCMKSCPVDAIRMGEDGLAKIDEAKCINCGACQVKCPFGAIED 198 >gi|148655927|ref|YP_001276132.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseiflexus sp. RS-1] gi|148568037|gb|ABQ90182.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Roseiflexus sp. RS-1] Length = 565 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 52 YFQVTRCNHCANPPCVRICPVTAMYQRSDGIVEFDPRVCIGCKACLQACPYDAIYIDPE 110 >gi|118444967|ref|YP_878935.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] gi|118135423|gb|ABK62467.1| Fe-hydrogenase large subunit family protein [Clostridium novyi NT] Length = 494 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCPV + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPVKAITKINGRAYINQDVCRECGMCKQVCPYNAISEVMRP 161 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 16/72 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVD--CFYEGENFLAIHPDECIDCGV 45 Y+ + C C C +VCP + C + I+ +ECI CG Sbjct: 133 AYINQDVCRECGMCKQVCPYNAISEVMRPCKKVCPTEAICISPQDRRAEINDEECISCGA 192 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 193 CMKACPFGAISD 204 >gi|220932451|ref|YP_002509359.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] gi|219993761|gb|ACL70364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] Length = 57 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ CI+C C CPVD +G+N I PD CIDCG C CPV+AI + Sbjct: 1 MAHVISDECIMCG--ACEPECPVDAISQGDNKYEIDPDTCIDCGACAEVCPVEAISEE 56 >gi|289675306|ref|ZP_06496196.1| ferredoxin [Pseudomonas syringae pv. syringae FF5] Length = 58 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 51 PVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 P AI + E G+E ++++N+E A WPNIT KK+++P AA+ DG K + Sbjct: 2 PAVAIYSEDEIPAGMENFIELNAELAEVWPNITEKKDAMPDAAEWDGKTGKIAEL 56 >gi|171463322|ref|YP_001797435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192860|gb|ACB43821.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 252 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + ++ Sbjct: 86 VSVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSFACPFGAPQFLSKGAF 145 >gi|167748877|ref|ZP_02421004.1| hypothetical protein ANACAC_03651 [Anaerostipes caccae DSM 14662] gi|317470283|ref|ZP_07929677.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167651847|gb|EDR95976.1| hypothetical protein ANACAC_03651 [Anaerostipes caccae DSM 14662] gi|316902256|gb|EFV24176.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 495 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V C C C+EVCP + + + I ++CI CG C+ CP AI P Sbjct: 112 AFIVGGECQGCMAHPCMEVCPKNAISFVDGYSYIDQEKCIKCGQCQKVCPYSAIHERKRP 171 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C +VCP +E + I+PD+C+ CG Sbjct: 143 SYIDQEKCIKCGQ--CQKVCPYSAIHERKRPCEVACGVGAIETDYAGRATINPDKCVSCG 200 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 201 MCMVNCPFGAI 211 >gi|92118594|ref|YP_578323.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801488|gb|ABE63863.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 198 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C VCPV+CFY E+ + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTEDGVVLHSKDLCIGCGYCFYACPFGAP-------- 102 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+++ + + T P A DG K++YEKY Sbjct: 103 -QYPKVSNFGSRGKMDKCTFCAGGPEA---DGSKEEYEKY 138 >gi|319779236|ref|YP_004130149.1| Electron transport complex protein RnfB [Taylorella equigenitalis MCE9] gi|317109260|gb|ADU92006.1| Electron transport complex protein RnfB [Taylorella equigenitalis MCE9] Length = 201 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y++ E+CI C T C++VCPVD ++ + PD C C +C CPVD I+ Sbjct: 82 AYILEEHCIGC--TKCIQVCPVDSIIGANKWMHTVIPDFCTGCELCVLACPVDCIQ--MN 137 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 P L LW + ++ A + K+ + D + E FS Sbjct: 138 PSLALWTEDDAAIARTRFHARNKRLEDDKILEQDRLNSLSENQFS 182 >gi|302336154|ref|YP_003801361.1| Ferredoxin hydrogenase [Olsenella uli DSM 7084] gi|301319994|gb|ADK68481.1| Ferredoxin hydrogenase [Olsenella uli DSM 7084] Length = 539 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C E+CP + I D C+ CG+CE CP AI P Sbjct: 127 YTVTDQCQGCLAHPCREICPKQAISFVDKRAHIDQDLCVQCGMCERTCPYHAIHHHVRP 185 >gi|302393028|ref|YP_003828848.1| NADH dehydrogenase (quinone) [Acetohalobium arabaticum DSM 5501] gi|302205105|gb|ADL13783.1| NADH dehydrogenase (quinone) [Acetohalobium arabaticum DSM 5501] Length = 598 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +T++C C T CV+ CP D E + I DECI CG C CP DAI + Sbjct: 544 YKITDDCEGC--TKCVDECPADAISGEAKEQHTIDVDECIKCGACVDVCPFDAIVKE 598 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGL 63 D+C C C ECP DAI + + Sbjct: 548 DDCEGCTKCVDECPADAISGEAKEQH 573 >gi|154483117|ref|ZP_02025565.1| hypothetical protein EUBVEN_00818 [Eubacterium ventriosum ATCC 27560] gi|149735925|gb|EDM51811.1| hypothetical protein EUBVEN_00818 [Eubacterium ventriosum ATCC 27560] Length = 504 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +T C C C+EVCP D + I D+CI CG C CP +A+ P Sbjct: 114 FITNACQGCLEHPCIEVCPKDAIKMVKGRSVIDQDKCIKCGKCASACPYNAVVKQERP 171 >gi|94311692|ref|YP_584902.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93355544|gb|ABF09633.1| formate dehydrogenase iron-sulfur subunit [Cupriavidus metallidurans CH34] Length = 226 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + +E Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSEGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ T P A +G + ++EKY Sbjct: 112 GVRGKMDK---------CTFCNGGPEA---NGSEAEFEKY 139 >gi|289578084|ref|YP_003476711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|297544357|ref|YP_003676659.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527797|gb|ADD02149.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|296842132|gb|ADH60648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 56 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPVD +EG+ I PD CIDCG CE CP A+K + Sbjct: 1 MAHYITDECISCG--ACAAECPVDAIHEGDGKYEIDPDTCIDCGACEAVCPTGAVKAE 56 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/22 (63%), Positives = 14/22 (63%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 DECI CG C ECPVDAI Sbjct: 7 DECISCGACAAECPVDAIHEGD 28 >gi|218135337|ref|ZP_03464141.1| hypothetical protein BACPEC_03242 [Bacteroides pectinophilus ATCC 43243] gi|217990722|gb|EEC56733.1| hypothetical protein BACPEC_03242 [Bacteroides pectinophilus ATCC 43243] Length = 56 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M ++++++C+ C CV CPV+ EG+ + I D CIDCG CE CPV A + + Sbjct: 1 MAHIISDDCVSCG--ACVAECPVNAISEGDGKMVIDADTCIDCGACEGVCPVGAPQAE 56 >gi|288574064|ref|ZP_06392421.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569805|gb|EFC91362.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 354 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C+ C C CPV I D CI CG C CP AI D + Sbjct: 189 VDDEKCVGCG--RCFRNCPVKAISMTGGKAVIDKDVCIGCGECLTVCPASAISLDWRTDV 246 Query: 64 ELWLKINSEYA 74 + + +EYA Sbjct: 247 VQFHRRMAEYA 257 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 +++ ++C+ CG C CPV AI Sbjct: 187 MSVDDEKCVGCGRCFRNCPVKAI 209 >gi|293401574|ref|ZP_06645717.1| hypothetical protein gi|291305212|gb|EFE46458.1| [Fe] hydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 482 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C C+ C D + G + I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACLSACKFDAIHMGNDHAFIDYDKCKECGACKNACPFNAIVETQRP 156 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKP 57 C++ CPVD GE+ L I ++CI+CG C+ +CP AI+ Sbjct: 155 RPCMKSCPVDAISMGESGLAEIDEEKCINCGACQAKCPFGAIED 198 >gi|116624720|ref|YP_826876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227882|gb|ABJ86591.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 83 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPV 52 M YV+T+ C K CV+ CPVDC + ++ L + PD+CIDCG C P CP Sbjct: 1 MAYVITDTCT--KDELCVQACPVDCIHPKQDEAGFAEAPQLYVKPDDCIDCGACVPVCPT 58 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 ++I + + IN+ + Sbjct: 59 NSIFVLDELPEEYAKFADINAAHY 82 >gi|239628874|ref|ZP_04671905.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239519020|gb|EEQ58886.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 55 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ ++C+ C C CPV EG+ I D CIDCG C CP AI+ Sbjct: 1 MAYVINDSCVSCG--SCAGECPVGAISEGDGKYVIDADTCIDCGTCAATCPTGAIE 54 >gi|163848741|ref|YP_001636785.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526688|ref|YP_002571159.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670030|gb|ABY36396.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450567|gb|ACM54833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 559 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 + VT C C + CV +CPV Y+ + + P CI C C CP DAI D E Sbjct: 53 FQVT-RCNHCANPPCVRICPVTAMYQRTDGIVEFDPKVCIGCKACLQACPYDAIYIDPE 110 >gi|302878833|ref|YP_003847397.1| cyclic nucleotide-binding protein [Gallionella capsiferriformans ES-2] gi|302581622|gb|ADL55633.1| cyclic nucleotide-binding protein [Gallionella capsiferriformans ES-2] Length = 796 Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C C+H C++ CP D + N D CI CG C+ CP I+ + + Sbjct: 672 VPTSCRHCEHPHCMKDCPPDAIHRSINGEVFISDNCIGCGNCQTNCPYGVIQMAVKQDYQ 731 Query: 65 L 65 Sbjct: 732 K 732 Score = 40.9 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 26/97 (26%), Gaps = 34/97 (35%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-----------FLAIHP--------------- 37 +++NCI C +C CP L I P Sbjct: 702 FISDNCIGCG--NCQTNCPYGVIQMAVKQDYQKRSIWQVMLGISPSQAKPAASDALPKVA 759 Query: 38 ---DEC---IDCGVCEPECPVDAIKPDTEPGLELWLK 68 D C I VC CP A + ++K Sbjct: 760 VKCDMCKDIIGGPVCVRACPTGAAFRVSPENFMEYVK 796 >gi|296184817|ref|ZP_06853228.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|296050599|gb|EFG90022.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 495 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C+EVCP + I+ + C +CG+C CP AI P Sbjct: 104 YTVTDACRGCIQHKCMEVCPANAITRVAGSAYINQELCKECGMCRKSCPYGAIAEVMRP 162 >gi|255502232|gb|ACU11597.1| HfsD [Thermoanaerobacterium saccharolyticum] Length = 495 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP I D+CI+CG C+ CP +AI + P Sbjct: 91 YRVTEACRGCITHRCTEVCPKGAITIINKKANIDYDKCIECGRCKDACPYNAISDNLRP 149 >gi|253680886|ref|ZP_04861689.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum D str. 1873] gi|253562735|gb|EES92181.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum D str. 1873] Length = 494 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCP + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPAKAINKINGRAYINQDACRECGMCKQVCPYNAISEVMRP 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 16/72 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVD--CFYEGENFLAIHPDECIDCGV 45 Y+ + C C C CP C + I +ECI CG Sbjct: 133 AYINQDACRECGMCKQVCPYNAISEVMRPCKTACPTGAICISPEDRRAIIKDEECISCGA 192 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 193 CMKACPFGAISD 204 >gi|323704227|ref|ZP_08115806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536293|gb|EGB26065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 56 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +++T+ CI C C CPVD +EG + D CIDCG CEP CP AIK + Sbjct: 1 MAHIITDECISCG--ACAAECPVDAIHEGTGKYEVDADTCIDCGACEPVCPTGAIKAE 56 >gi|299135397|ref|ZP_07028587.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298589805|gb|EFI50010.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 198 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 ISMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAP-------- 102 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+ + + + T P A DG K++YEKY Sbjct: 103 -QYPKLGNFGSRGKMDKCTFCAGGPEA---DGSKEEYEKY 138 >gi|160915963|ref|ZP_02078171.1| hypothetical protein EUBDOL_01988 [Eubacterium dolichum DSM 3991] gi|158432439|gb|EDP10728.1| hypothetical protein EUBDOL_01988 [Eubacterium dolichum DSM 3991] Length = 482 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+NC C CV C D + G I D+C +CG C+ CP +AI P Sbjct: 100 VTDNCRKCMAKACVASCKFDAIHIGNERAYIDYDKCKECGACKNACPFNAIVETPRP 156 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 Y+ + C C C CPVD GEN L I ++CI+CG C Sbjct: 128 AYIDYDKCKECGACKNACPFNAIVETPRPCKLSCPVDAITIGENKLAYIDEEKCINCGAC 187 Query: 47 EPECPVDAIKP 57 + +CP AI+ Sbjct: 188 QAKCPFGAIED 198 >gi|332286205|ref|YP_004418116.1| ferrodoxin, 4Fe-4S [Pusillimonas sp. T7-7] gi|330430158|gb|AEC21492.1| ferrodoxin, 4Fe-4S [Pusillimonas sp. T7-7] Length = 74 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSA 90 + I P C++C C CPV AI PD E + +N + + +P + LP A Sbjct: 1 MVIDPAVCVNCTTCVIVCPVGAIVPDYELQADQHSFKALNRDLSKVYPRASGPVPPLPDA 60 Query: 91 AKMDGVKQKYEKYF 104 + K K Sbjct: 61 DEHAFETNKRSKLL 74 >gi|85859636|ref|YP_461838.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85722727|gb|ABC77670.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 59 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M YV+T++C+ C C +VCP EGE+ I P C DCG C +CP +AI P E Sbjct: 1 MAYVITDDCVACG--SCQDVCPAGAISEGEDKYVIDPAVCTDCGTCAEQCPAEAIVPGEE 58 >gi|323704847|ref|ZP_08116424.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535773|gb|EGB25547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 372 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V + C C C++ CP D + I P++CI CG C C DAI P ++ Sbjct: 191 VGKKCTAC--QTCIKNCPEDAISLVDGKAYIDPEKCIGCGECITMCQYDAINPQWGTDMD 248 Query: 65 LWLKINSEYA 74 +++ +EYA Sbjct: 249 EFVERMTEYA 258 >gi|225374841|ref|ZP_03752062.1| hypothetical protein ROSEINA2194_00464 [Roseburia inulinivorans DSM 16841] gi|225213302|gb|EEG95656.1| hypothetical protein ROSEINA2194_00464 [Roseburia inulinivorans DSM 16841] Length = 468 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEPGRLRSHIDPQKCKECGKCAQACPYNAIAHLKRP 151 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C CPV+ E + I +CI CG C CP AI Sbjct: 150 RPCKFSCPVNAITYDEYGISVIDEKKCIRCGKCIHSCPFGAI 191 >gi|160937728|ref|ZP_02085088.1| hypothetical protein CLOBOL_02621 [Clostridium bolteae ATCC BAA-613] gi|158439373|gb|EDP17125.1| hypothetical protein CLOBOL_02621 [Clostridium bolteae ATCC BAA-613] Length = 56 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+++ C+ C C CPV EG++ I D CIDCG C CP AI Sbjct: 1 MAYVISDACVSCG--SCAAECPVSAISEGDSQYVIDADTCIDCGTCAATCPTGAI 53 >gi|291527156|emb|CBK92742.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale M104/1] Length = 485 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEAGRLRSHIDPQKCKECGRCAQACPYNAIAHLKRP 151 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C CPV+ E + I +CI CG C CP AI Sbjct: 150 RPCKFSCPVNAITYNEYGISVIDESKCIRCGKCIHSCPFGAI 191 >gi|238924739|ref|YP_002938255.1| ferredoxin hydrogenase [Eubacterium rectale ATCC 33656] gi|238876414|gb|ACR76121.1| ferredoxin hydrogenase [Eubacterium rectale ATCC 33656] gi|291526109|emb|CBK91696.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale DSM 17629] Length = 485 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I P +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEAGRLRSHIDPQKCKECGRCAQACPYNAIAHLKRP 151 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C CPV+ E + I +CI CG C CP AI Sbjct: 150 RPCKFSCPVNAITYNEYGISVIDESKCIRCGKCIHSCPFGAI 191 >gi|225386321|ref|ZP_03756085.1| hypothetical protein CLOSTASPAR_00064 [Clostridium asparagiforme DSM 15981] gi|225047600|gb|EEG57846.1| hypothetical protein CLOSTASPAR_00064 [Clostridium asparagiforme DSM 15981] Length = 56 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++C+ C C CPV EG++ I D CIDCG C CP AI Sbjct: 1 MAYVINDSCVSCG--SCAAECPVGAISEGDSQYVIDADTCIDCGTCAGTCPTGAI 53 >gi|304439744|ref|ZP_07399642.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371731|gb|EFM25339.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 79 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +++T+ CI C C CPV+C EG I D+CIDCG C CP A +P+ Sbjct: 24 MAHIITDACIACG--ACQPECPVNCISEGA-IYEIDQDQCIDCGACSSVCPTGAAQPE 78 Score = 40.1 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 16/30 (53%), Positives = 18/30 (60%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 FY G I D CI CG C+PECPV+ I Sbjct: 18 FYGGAIMAHIITDACIACGACQPECPVNCI 47 >gi|237736591|ref|ZP_04567072.1| hydrogenase [Fusobacterium mortiferum ATCC 9817] gi|229420453|gb|EEO35500.1| hydrogenase [Fusobacterium mortiferum ATCC 9817] Length = 642 Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C +G+ I D C CG C CPV AI Sbjct: 217 FRITEKCIGC--TACARVCPVKCI-DGKLKEKHTIDTDRCTHCGQCVAACPVGAIFEGD 272 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFL 33 T+ C C CV CPV +EG++ L Sbjct: 250 TDRCTHCGQ--CVAACPVGAIFEGDHTL 275 >gi|296452544|ref|ZP_06894241.1| ferredoxin [Clostridium difficile NAP08] gi|296881044|ref|ZP_06904987.1| ferredoxin [Clostridium difficile NAP07] gi|296258649|gb|EFH05547.1| ferredoxin [Clostridium difficile NAP08] gi|296427910|gb|EFH13814.1| ferredoxin [Clostridium difficile NAP07] Length = 70 Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 15 MAYKITDACISCG--ACEAECPVSCISAGDDAYVIDASSCIDCGSCAGACPVDAPQPE 70 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 D CI CG CE ECPV I + Sbjct: 14 KMAYKITDACISCGACEAECPVSCISAGDDA 44 >gi|323706136|ref|ZP_08117705.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534580|gb|EGB24362.1| Ferredoxin hydrogenase [Thermoanaerobacterium xylanolyticum LX-11] Length = 504 Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C EVCP I D+CI+CG C+ CP +AI + P Sbjct: 100 YRVTEACRGCITHRCTEVCPKGAITIINKKANIDYDKCIECGRCKDACPYNAISDNLRP 158 >gi|150015217|ref|YP_001307471.1| ferredoxin hydrogenase [Clostridium beijerinckii NCIMB 8052] gi|149901682|gb|ABR32515.1| Ferredoxin hydrogenase [Clostridium beijerinckii NCIMB 8052] Length = 496 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C C + I PD+C +CG+C+ CP DA+ D P Sbjct: 104 FQVTDACRNCIAHKCQSACNFGAITYVDGRAYIDPDKCKECGMCKKACPYDAVAEDMRP 162 >gi|255525714|ref|ZP_05392646.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] gi|255510616|gb|EET86924.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] Length = 458 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C+EVCP + I+ + C +CG+C CP AI P Sbjct: 67 YTVTDACRGCIQHKCMEVCPANAITRVAGSAYINQELCKECGMCRKSCPYGAIAEVMRP 125 >gi|218133263|ref|ZP_03462067.1| hypothetical protein BACPEC_01128 [Bacteroides pectinophilus ATCC 43243] gi|217992136|gb|EEC58140.1| hypothetical protein BACPEC_01128 [Bacteroides pectinophilus ATCC 43243] Length = 483 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+NC LC C + C G + I P +C +CG C CP +AI P Sbjct: 95 YTVTDNCRLCMMKACKQACKFGAVSMGRDRAYIDPQKCRECGQCAKACPYNAIADLIRP 153 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 Y+ + C C C++ CPV E ++ I +CI+CG C Sbjct: 125 AYIDPQKCRECGQCAKACPYNAIADLIRPCMKTCPVGAIEMDEYGVSKIDESKCIECGKC 184 Query: 47 EPECPVDAI 55 CP AI Sbjct: 185 IHSCPFGAI 193 >gi|188585512|ref|YP_001917057.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350199|gb|ACB84469.1| hydrogenase large subunit domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 507 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+E CP D I+ ++CI+CG C+ CP +AI P Sbjct: 110 FTVTEACRGCVAHYCMESCPKDAISFINRQAYINQEKCIECGKCKNMCPFNAISDVMRP 168 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCG 44 Y+ E CI C C +CP + + G+ ++I D+C+ CG Sbjct: 140 AYINQEKCIECG--KCKNMCPFNAISDVMRPCRSACTVDAVKVDGDRRISIDQDKCVSCG 197 Query: 45 VCEPECPVDAI 55 C CP AI Sbjct: 198 ACIEACPFGAI 208 >gi|158634532|gb|ABW76118.1| Fe-hydrogenase 3 [Trimastix pyriformis] Length = 445 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C+ CP + I PD C+ CG C+ CP AI Sbjct: 115 AYFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGACQKVCPYHAI 168 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 15/61 (24%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 + C+ C C E CPV +G I ++CI CG C+ CP Sbjct: 151 DLCVRCGACQKVCPYHAIVKLAVPCEEACPVGAIAKGPSGHAEIDWEKCIHCGQCQLHCP 210 Query: 52 V 52 Sbjct: 211 F 211 >gi|73540389|ref|YP_294909.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117802|gb|AAZ60065.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 237 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSTGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K + +G + ++EKY Sbjct: 112 GVRGKMD------------KCTFCAGGPEKNGSEAEFEKY 139 >gi|331084747|ref|ZP_08333835.1| hypothetical protein HMPREF0987_00138 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410841|gb|EGG90263.1| hypothetical protein HMPREF0987_00138 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 504 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I +CI CG C+ CP DAI P Sbjct: 118 YEVSNMCKGCLAHPCAEVCPKDAISMVNGHSYIDQSKCIKCGKCKSACPYDAIAKKERP 176 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ CI C C CP D + E A I ++C+ CG Sbjct: 148 SYIDQSKCIKCG--KCKSACPYDAIAKKERPCARACGVNAIVSDKVGRAKIDNEKCVSCG 205 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 206 MCMVSCPFGAISD 218 >gi|325661658|ref|ZP_08150282.1| hypothetical protein HMPREF0490_01016 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472185|gb|EGC75399.1| hypothetical protein HMPREF0490_01016 [Lachnospiraceae bacterium 4_1_37FAA] Length = 504 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP D I +CI CG C+ CP DAI P Sbjct: 118 YEVSNMCKGCLAHPCAEVCPKDAISMVNGHSYIDQSKCIKCGKCKSACPYDAIAKKERP 176 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +Y+ CI C C CP D + E A I ++C+ CG Sbjct: 148 SYIDQSKCIKCG--KCKSACPYDAIAKKERPCARACGVNAIVSDKVGRAKIDNEKCVSCG 205 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 206 MCMVSCPFGAISD 218 >gi|110802368|ref|YP_699704.1| ferredoxin (fdxA) [Clostridium perfringens SM101] gi|110682869|gb|ABG86239.1| putative ferredoxin [Clostridium perfringens SM101] Length = 69 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + + C+ C C CPVD +G+ I D CIDCG C CPV A + Sbjct: 14 MAYKILDTCVSCG--ACAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGAPVQE 69 >gi|258514612|ref|YP_003190834.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778317|gb|ACV62211.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 368 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + CI C C EVCP E I D+CI CG C CPV A D + L Sbjct: 190 VDEDKCIGCGG--CSEVCPEQAITMSEMKANIDLDKCIGCGECLTVCPVKANGIDWQTDL 247 Query: 64 ELWLKINSEY 73 E +L+ +EY Sbjct: 248 EAFLERMAEY 257 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + + D+CI CG C CP AI Sbjct: 187 KIVVDEDKCIGCGGCSEVCPEQAI 210 >gi|302669638|ref|YP_003829598.1| ferredoxin [Butyrivibrio proteoclasticus B316] gi|302394111|gb|ADL33016.1| ferredoxin [Butyrivibrio proteoclasticus B316] Length = 56 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+++ CI C C CPV +G+ I + CIDCG C +CPV AI Sbjct: 1 MAYVISDGCISCG--SCAAQCPVSAISQGDTQYVIDANTCIDCGSCAAQCPVSAI 53 >gi|124266363|ref|YP_001020367.1| formate dehydrogenase iron-sulfur subunit [Methylibium petroleiphilum PM1] gi|124259138|gb|ABM94132.1| formate dehydrogenase iron-sulfur subunit [Methylibium petroleiphilum PM1] Length = 210 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + T Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSYACPFGAPQFPTNGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L K++ T P A +G + ++EKY Sbjct: 111 GLRGKMDK---------CTFCAGGPEA---NGSEAEFEKY 138 >gi|193213841|ref|YP_001995040.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087318|gb|ACF12593.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 547 Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C C + CV +CPV Y+ E+ + + CI C C CP +AI D + Sbjct: 51 YFQVTRCNHCANPPCVRICPVTAMYQREDGIVEFDKNVCIGCKACTQACPYNAIHVDPDS 110 Query: 62 G 62 G Sbjct: 111 G 111 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 7/18 (38%) Query: 33 LAIHPDECIDCGVCEPEC 50 I +CI C C C Sbjct: 5 FVIDNRKCIGCHACSTAC 22 >gi|331270381|ref|YP_004396873.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum BKT015925] gi|329126931|gb|AEB76876.1| Fe-hydrogenase large subunit family protein [Clostridium botulinum BKT015925] Length = 494 Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +TE C C C+EVCP + I+ D C +CG+C+ CP +AI P Sbjct: 103 YTITEACRGCVQHKCMEVCPAKAITKINGRAYINQDVCRECGMCKQVCPYNAISEVMRP 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 16/72 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVD--CFYEGENFLAIHPDECIDCGV 45 Y+ + C C C CP C + I +ECI CG Sbjct: 133 AYINQDVCRECGMCKQVCPYNAISEVMRPCKTACPTGAICISPEDRRAVIKDEECISCGA 192 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 193 CMKACPFGAISD 204 >gi|241663767|ref|YP_002982127.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|240865794|gb|ACS63455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 222 Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K + +G ++++EKY Sbjct: 112 GVRGKMD------------KCTFCAGGPEKNGSEEEFEKY 139 >gi|187929657|ref|YP_001900144.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|309781575|ref|ZP_07676310.1| formate dehydrogenase [Ralstonia sp. 5_7_47FAA] gi|187726547|gb|ACD27712.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|308919680|gb|EFP65342.1| formate dehydrogenase [Ralstonia sp. 5_7_47FAA] Length = 222 Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K + +G ++++EKY Sbjct: 112 GVRGKMD------------KCTFCAGGPEKNGSEEEFEKY 139 >gi|227873643|ref|ZP_03991880.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oribacterium sinus F0268] gi|227840514|gb|EEJ50907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oribacterium sinus F0268] Length = 56 Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +VV++ C+ C C VCPV+ EG + PD CIDCG CE CP AI + Sbjct: 1 MAHVVSDECVSCG--ACAAVCPVEAISEGPTKYVVDPDTCIDCGACEEPCPTGAIAAE 56 >gi|313903955|ref|ZP_07837335.1| hydrogenase large subunit domain protein [Eubacterium cellulosolvens 6] gi|313471104|gb|EFR66426.1| hydrogenase large subunit domain protein [Eubacterium cellulosolvens 6] Length = 513 Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C C D G + I P +C +CG C CP +AI P Sbjct: 95 SYSVTDNCRKCMGQACKNACKFDAISIGNHRSHIDPTKCRECGKCAQACPYNAIVHLERP 154 >gi|152981586|ref|YP_001353659.1| formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit) [Janthinobacterium sp. Marseille] gi|151281663|gb|ABR90073.1| formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit) [Janthinobacterium sp. Marseille] Length = 209 Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEEGVVLHDKDICIGCGYCSYACPFGAPQFPSNGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L K++ K + +G K ++EKY Sbjct: 112 GLRGKMD------------KCTFCAGGPEENGSKAEFEKY 139 >gi|331083579|ref|ZP_08332690.1| ferredoxin [Lachnospiraceae bacterium 6_1_63FAA] gi|330403790|gb|EGG83342.1| ferredoxin [Lachnospiraceae bacterium 6_1_63FAA] Length = 56 Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T+ C+ C C CPV+ EG++ I D C+DCG C CP +AI Sbjct: 1 MAYVITDECVSCG--TCAGECPVEAISEGDDKYVIDADTCVDCGTCAGVCPTEAI 53 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + DEC+ CG C ECPV+AI + Sbjct: 1 MAYVITDECVSCGTCAGECPVEAISEGDD 29 >gi|167761785|ref|ZP_02433912.1| hypothetical protein BACSTE_00125 [Bacteroides stercoris ATCC 43183] gi|167700291|gb|EDS16870.1| hypothetical protein BACSTE_00125 [Bacteroides stercoris ATCC 43183] Length = 70 Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I P+ C +CG C CP +AI P Sbjct: 15 MAYVISDDCIACG--TCIDECPVGAISEG-DIYSIDPETCTECGTCADVCPSEAIHP 68 >gi|18977101|ref|NP_578458.1| mulitcopper oxidase domain-containing protein [Pyrococcus furiosus DSM 3638] gi|18892744|gb|AAL80853.1| multi domain protein containing corrinoid/iron-sulfur region [Pyrococcus furiosus DSM 3638] Length = 388 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%) Query: 6 TENCILCKHTDCVEVCPVDCF-YEGENFLAIHP--DECIDCGVCEPECPVDAIKPDTEPG 62 E C C CV+VCP C+ +GEN + P D+C+ CG C +CP +A++ + G Sbjct: 303 GERCTGCGV--CVDVCPRACYEVDGENHTVMMPRADKCVQCGACIVQCPFEALRFEAPDG 360 >gi|295697039|ref|YP_003590277.1| Polysulphide reductase NrfD [Bacillus tusciae DSM 2912] gi|295412641|gb|ADG07133.1| Polysulphide reductase NrfD [Bacillus tusciae DSM 2912] Length = 519 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + +T C C+ CV +CPV ++ + + + CI C C CP DAI Sbjct: 65 FQIT-RCNQCEDPPCVAICPVSAMFQRPDGIVDFDREVCIGCKACMAACPYDAIY 118 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 29/77 (37%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPV 52 E CI CK C+ CP D IHPD +C C C CPV Sbjct: 100 EVCIGCK--ACMAACPYDAI-------YIHPDIHSAEKCNFCAHRIDQGLEPACVAVCPV 150 Query: 53 DAIK------PDTEPGL 63 +AI P++E Sbjct: 151 EAIVVGDLNDPESEVSQ 167 >gi|329913103|ref|ZP_08275888.1| Formate dehydrogenase-O, iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] gi|327545421|gb|EGF30633.1| Formate dehydrogenase-O, iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] Length = 208 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C C+ VCPVDCFY + + +H D CI CG C CP A + + L Sbjct: 55 ACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCAYACPFGAPQFPSNGVFGLR 114 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 K++ K + DG K+++EKY Sbjct: 115 GKMD------------KCTFCAGGPEEDGSKEEFEKY 139 >gi|291561240|emb|CBL40039.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 490 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +VVT+NC C C C G + I P C +CG C CP +AI P Sbjct: 94 FVVTDNCQKCMGKACQNACNFGAISIGRDRAHIDPSVCKECGRCAQSCPYNAIAELIRP 152 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%) Query: 15 TDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 C CPVD I +CI CG C CP AI Sbjct: 151 RPCRRACPVDAITMDPETGICQIDEKKCIQCGACVRSCPFGAI 193 >gi|210615774|ref|ZP_03290755.1| hypothetical protein CLONEX_02973 [Clostridium nexile DSM 1787] gi|210150110|gb|EEA81119.1| hypothetical protein CLONEX_02973 [Clostridium nexile DSM 1787] Length = 502 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V++ C C C EVCPV + I ++CI CG C+ CP DAI P Sbjct: 116 YEVSDMCKGCVAHPCREVCPVGAISMKKGRSYIDQEKCIKCGKCKSVCPYDAISKKERP 174 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D + E I D+C+ CG Sbjct: 146 SYIDQEKCIKCG--KCKSVCPYDAISKKERPCAKACGVNAIGSDKMGRAHIDNDKCVSCG 203 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 204 MCMVSCPFGAISD 216 >gi|134094637|ref|YP_001099712.1| formate dehydrogenase iron-sulfur subunit FdnH [Herminiimonas arsenicoxydans] gi|133738540|emb|CAL61585.1| formate dehydrogenase iron-sulfur subunit [Herminiimonas arsenicoxydans] Length = 209 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSYACPFGAPQFPSNGAF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 L K++ K + +G K ++EKY Sbjct: 112 GLRGKMD------------KCTFCAGGPEENGSKAEFEKY 139 >gi|266619566|ref|ZP_06112501.1| conserved domain protein [Clostridium hathewayi DSM 13479] gi|288868851|gb|EFD01150.1| conserved domain protein [Clostridium hathewayi DSM 13479] Length = 56 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C CPV EGE I D CI CG C CPV AI + Sbjct: 1 MAYVISDACVSCG--TCEGECPVSAISEGEGQYVIDADTCISCGTCAGACPVGAISEE 56 >gi|167770334|ref|ZP_02442387.1| hypothetical protein ANACOL_01677 [Anaerotruncus colihominis DSM 17241] gi|167667656|gb|EDS11786.1| hypothetical protein ANACOL_01677 [Anaerotruncus colihominis DSM 17241] Length = 513 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C EVCP D I ++CI CG C CP AI P Sbjct: 124 YRVTDCCQGCLAHPCKEVCPRDAVSIVHGKSVIDQEKCIKCGRCAEVCPYGAILKLERP 182 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 19/68 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 E CI C C EVCP + E I D+C+ CG+C Sbjct: 159 EKCIKCG--RCAEVCPYGAILKLERPCASACGMDAISSDEHGRAVIDYDKCVSCGMCIVN 216 Query: 50 CPVDAIKP 57 CP AI Sbjct: 217 CPFGAISD 224 >gi|220931057|ref|YP_002507965.1| hydrogenase large subunit domain protein [Halothermothrix orenii H 168] gi|219992367|gb|ACL68970.1| hydrogenase large subunit domain protein [Halothermothrix orenii H 168] Length = 491 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VVT C C CV CP N + ++C++CG+C CP AI P Sbjct: 115 VVTNACRNCVAHHCVNSCPRGAITIVNNQAYVIREKCVECGLCVKACPYGAILEVERP 172 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 19/76 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 YV+ E C+ C CV+ CP E E I + CI+CG Sbjct: 144 AYVIREKCVECGL--CVKACPYGAILEVERPCTSACSLDAVVPGEKSTAEIDDNNCIECG 201 Query: 45 VCEPECPVDAIKPDTE 60 C CP AI +E Sbjct: 202 SCIEACPFGAISYKSE 217 >gi|188587472|ref|YP_001919017.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352159|gb|ACB86429.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 56 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +TE CI C C CP + EGE I D CIDCG C CPVDAI + Sbjct: 1 MAYKITEECIKCG--ACEPECPTEAISEGEEMYVIDADNCIDCGACADVCPVDAIIQE 56 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 16/29 (55%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +ECI CG CEPECP +AI E Sbjct: 1 MAYKITEECIKCGACEPECPTEAISEGEE 29 >gi|188584741|ref|YP_001916286.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349428|gb|ACB83698.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 597 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ +NCI C T CV+VCPVD E + I PD+CI CG C +C +AI Sbjct: 544 IIADNCIGC--TACVKVCPVDAISGEKKQAHEIDPDKCIGCGECYEKCKFEAI 594 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP I D CI C C CPVDAI + + E Sbjct: 531 CPAG-ICADLVKYKIIADNCIGCTACVKVCPVDAISGEKKQAHE 573 >gi|291458640|ref|ZP_06598030.1| conserved domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419173|gb|EFE92892.1| conserved domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 56 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV EGE+ + D CIDCG CE CP AI + Sbjct: 1 MAHVISDECVSCG--ACASACPVQAISEGESKYVVDADSCIDCGACEEVCPTGAITAE 56 >gi|322371908|ref|ZP_08046450.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Haladaptatus paucihalophilus DX253] gi|320548330|gb|EFW90002.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Haladaptatus paucihalophilus DX253] Length = 594 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C +VCPV +E E+ + P+ CI C C CP DA+ D E Sbjct: 61 CNHCDDSPCTDVCPVTALWEREDGIVDFDPERCIGCKACMQGCPYDALYIDPE 113 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 23/63 (36%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----EC------IDCG---VCEPECPV 52 E CI CK C++ CP D L I P+ +C +D G C CP Sbjct: 91 ERCIGCK--ACMQGCPYDA-------LYIDPETSTAAKCNYCSHRVDTGREPACVTVCPE 141 Query: 53 DAI 55 DAI Sbjct: 142 DAI 144 >gi|158634528|gb|ABW76116.1| Fe-hydrogenase 1 [Trimastix pyriformis] Length = 439 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C+ CP + I PD C+ CG C+ CP AI Sbjct: 115 AYFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGACQKVCPYHAI 168 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 15/61 (24%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 + C+ C C E CPV +G I ++CI CG C+ CP Sbjct: 151 DLCVRCGACQKVCPYHAIVKLAVPCEEACPVGAIAKGPSGHAEIDWEKCIHCGQCQLHCP 210 Query: 52 V 52 Sbjct: 211 F 211 >gi|260437208|ref|ZP_05791024.1| hydrogenase subunit [Butyrivibrio crossotus DSM 2876] gi|292810521|gb|EFF69726.1| hydrogenase subunit [Butyrivibrio crossotus DSM 2876] Length = 481 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC C C+ C GE+ I +C +CG+C CP +AI P Sbjct: 92 SYTVTDNCQNCPGKACINACKFGAISTGEHHSKIDGSKCKECGMCAKACPYNAIAHLKRP 151 >gi|194290506|ref|YP_002006413.1| formate dehydrogenase iron-sulfur subunit [Cupriavidus taiwanensis LMG 19424] gi|193224341|emb|CAQ70352.1| FORMATE DEHYDROGENASE, IRON-SULFUR SUBUNIT [Cupriavidus taiwanensis LMG 19424] Length = 232 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSTGTF 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K + +G + ++EKY Sbjct: 112 GVRGKMD------------KCTFCAGGPEKNGSEAEFEKY 139 >gi|212696805|ref|ZP_03304933.1| hypothetical protein ANHYDRO_01367 [Anaerococcus hydrogenalis DSM 7454] gi|212676095|gb|EEB35702.1| hypothetical protein ANHYDRO_01367 [Anaerococcus hydrogenalis DSM 7454] Length = 502 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT C C CV VCP + I D+CI CG C CP +AI P E Sbjct: 115 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVQACPYNAISHTKRPCAE 174 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-----------------NFLAIHPDECIDCGVCEPE 49 + CI C CV+ CP + + N I D+C+ CG C Sbjct: 148 DKCIKCG--KCVQACPYNAISHTKRPCAEACGVKAIKSDKLNRAEIDDDKCVACGRCITA 205 Query: 50 CPVDAIKPDTE 60 CP AI TE Sbjct: 206 CPFGAISDKTE 216 >gi|325847091|ref|ZP_08169917.1| 4Fe-4S binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481063|gb|EGC84108.1| 4Fe-4S binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 502 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT C C CV VCP + I D+CI CG C CP +AI P E Sbjct: 115 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVQACPYNAISHTKRPCAE 174 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-----------------NFLAIHPDECIDCGVCEPE 49 + CI C CV+ CP + + N I D+C+ CG C Sbjct: 148 DKCIKCG--KCVQACPYNAISHTKRPCAEACGVKAIKSDKLNRAEIDDDKCVACGRCITA 205 Query: 50 CPVDAIKPDTE 60 CP AI TE Sbjct: 206 CPFGAISDKTE 216 >gi|167630565|ref|YP_001681064.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] gi|167593305|gb|ABZ85053.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] Length = 60 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 MT+++ ++C+ C C CP + EG + I D+CIDCG C CPV A +P+ + Sbjct: 1 MTHIINDDCVNCG--ACAPECPTNAISEGPDKYIIDADKCIDCGACADVCPVGAPRPEGD 58 Query: 61 P 61 Sbjct: 59 Q 59 >gi|299066029|emb|CBJ37210.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CMR15] Length = 228 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 108 >gi|83746723|ref|ZP_00943772.1| Formate dehydrogenase (cytochrome b) iron-sulfur subunit [Ralstonia solanacearum UW551] gi|207721373|ref|YP_002251814.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum MolK2] gi|207742649|ref|YP_002259041.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] gi|83726676|gb|EAP73805.1| Formate dehydrogenase (cytochrome b) iron-sulfur subunit [Ralstonia solanacearum UW551] gi|206586532|emb|CAQ17119.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum MolK2] gi|206594043|emb|CAQ60970.1| formate dehydrogenase (iron-sulfur subunit) protein [Ralstonia solanacearum IPO1609] Length = 228 Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 108 >gi|145589578|ref|YP_001156175.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047984|gb|ABP34611.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 218 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C+ VCPVDCFY + + +H D CI CG C CP A + +T+ Sbjct: 52 VSVACMHCTDAPCMAVCPVDCFYRTDEGVVLHDKDICIGCGYCSLACPFGAPQFETKGAF 111 Query: 64 ELWLKIN 70 K++ Sbjct: 112 GTRSKMD 118 >gi|17547091|ref|NP_520493.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum GMI1000] gi|17429392|emb|CAD16079.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 231 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 108 >gi|319794274|ref|YP_004155914.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315596737|gb|ADU37803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 206 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV CFY + + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVQCFYRTDEGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 A + T P A +G + ++EKY Sbjct: 111 G---------ARGKMDKCTFCAGGPEA---NGSEAEFEKY 138 >gi|166030704|ref|ZP_02233533.1| hypothetical protein DORFOR_00378 [Dorea formicigenerans ATCC 27755] gi|166029496|gb|EDR48253.1| hypothetical protein DORFOR_00378 [Dorea formicigenerans ATCC 27755] Length = 56 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+ ++CI C C CPV EG+ I+ D CIDCG C +CPV AI Sbjct: 1 MAHVIGDDCISCG--SCEAECPVSAISEGDGKYEINADACIDCGACAAQCPVGAI 53 >gi|326791937|ref|YP_004309758.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium lentocellum DSM 5427] gi|326542701|gb|ADZ84560.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium lentocellum DSM 5427] Length = 57 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y++ E+CI C C CPV C EG++ I+ DECI+CG C CPV A P+ Sbjct: 1 MAYIINEDCISCG--ACAAECPVSCISEGDSIYVINADECIECGACAGVCPVGAPNPE 56 >gi|302391756|ref|YP_003827576.1| anaerobic carbon-monoxide dehydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] gi|302203833|gb|ADL12511.1| anaerobic carbon-monoxide dehydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] Length = 613 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++C C T CV+ CP D E + I D+CI CG C CP DAI Sbjct: 559 YQITDDCQGC--TKCVDECPGDAISGEAKEQHTIDEDDCIKCGSCINVCPFDAI 610 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGL 63 D+C C C ECP DAI + + Sbjct: 563 DDCQGCTKCVDECPGDAISGEAKEQH 588 >gi|297616864|ref|YP_003702023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297144701|gb|ADI01458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 58 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y +T+ CI C CV+ CPV EG++ I P+ C +CG C CPV+A +P E Sbjct: 1 MAYYITDECISCGV--CVDECPVGAISEGDDKYVIDPELCTECGACAEICPVEAPQPAEE 58 >gi|294632939|ref|ZP_06711498.1| ferredoxin-NADP reductase [Streptomyces sp. e14] gi|292830720|gb|EFF89070.1| ferredoxin-NADP reductase [Streptomyces sp. e14] Length = 514 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE--PGLELWLKINSEYAT 75 L I P CIDCG C CPVDAI P + ++N+ Y Sbjct: 1 MLYIDPKSCIDCGACADACPVDAISPADRLTGAQARYAEVNAAYYA 46 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN 31 M Y+ ++CI C C + CPVD + Sbjct: 1 MLYIDPKSCIDCG--ACADACPVDAISPADR 29 >gi|256544643|ref|ZP_05472015.1| periplasmic [Fe] hydrogenase 1 [Anaerococcus vaginalis ATCC 51170] gi|256399532|gb|EEU13137.1| periplasmic [Fe] hydrogenase 1 [Anaerococcus vaginalis ATCC 51170] Length = 489 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT C C CV VCP + I D+CI CG C CP +AI P E Sbjct: 102 VTNTCRACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVEACPYNAIAHTKRPCAE 161 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 19/71 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 + CI C CVE CP + + I D+C+ CG C Sbjct: 135 DKCIKCG--KCVEACPYNAIAHTKRPCAESCGVKAIKSDKLGRAEIDDDKCVACGRCITA 192 Query: 50 CPVDAIKPDTE 60 CP AI TE Sbjct: 193 CPFGAISDKTE 203 >gi|300690757|ref|YP_003751752.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum PSI07] gi|299077817|emb|CBJ50455.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum PSI07] Length = 228 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 108 >gi|241765326|ref|ZP_04763303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] gi|241364964|gb|EER59889.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax delafieldii 2AN] Length = 206 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ T P A +G + ++EKY Sbjct: 111 GVRGKMDK---------CTFCAGGPEA---NGSQAEFEKY 138 >gi|158634530|gb|ABW76117.1| Fe-hydrogenase 2 [Trimastix pyriformis] Length = 292 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 26/63 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C+ CP + I PD C+ CG C+ CP AI T P Sbjct: 115 AYFVTNACQGCVARPCMSTCPKKAISRVDGQAKIDPDLCVRCGSCQKVCPYHAIVKLTVP 174 Query: 62 GLE 64 E Sbjct: 175 CEE 177 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 15/64 (23%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 + C+ C C E CPV +G N I ++CI CG C+ +CP Sbjct: 151 DLCVRCGSCQKVCPYHAIVKLTVPCEEACPVGAIAKGANGHAEIDFNKCIHCGQCQVKCP 210 Query: 52 VDAI 55 ++ Sbjct: 211 FGSV 214 >gi|291280537|ref|YP_003497372.1| 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] gi|290755239|dbj|BAI81616.1| 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] Length = 56 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+T+ C C C + CPV EG+ I PD C DCG C CPVDAI+ Sbjct: 1 MAHVITDECTNCG--ACEDECPVGAISEGDGKRVIDPDTCTDCGACAEVCPVDAIE 54 >gi|226324119|ref|ZP_03799637.1| hypothetical protein COPCOM_01897 [Coprococcus comes ATCC 27758] gi|225207668|gb|EEG90022.1| hypothetical protein COPCOM_01897 [Coprococcus comes ATCC 27758] Length = 482 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VTENC C C+ C G I +C +CG C CP +AI P Sbjct: 92 SYTVTENCQNCLGKACINACKFGAIEPGHYRSHIDASKCKECGQCAKACPYNAIAHLKRP 151 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C CPVD E+ ++I ++CI CG C CP AI Sbjct: 150 RPCKFSCPVDAITYDEHGISIIDKNKCIRCGKCIHSCPFGAI 191 >gi|253579276|ref|ZP_04856546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849374|gb|EES77334.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 505 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +TE C C CVEVCP + I D CI CG C CP +AI P Sbjct: 115 ITEGCQGCLEHPCVEVCPKKAVHMEGGRSHIDEDACIKCGKCLEACPYNAIIKQERP 171 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ + CI C C+E CP + + E I D+C+ CG Sbjct: 143 SHIDEDACIKCG--KCLEACPYNAIIKQERPCSKACGMNAIGSDEYGRAEIDQDKCVSCG 200 Query: 45 VCEPECPVDAI 55 C CP AI Sbjct: 201 QCLVSCPFSAI 211 >gi|311697010|gb|ADP99883.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [marine bacterium HP15] Length = 160 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 14 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQF 67 >gi|27380587|ref|NP_772116.1| formate dehydrogenase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] gi|27353752|dbj|BAC50741.1| formate dehydrogenase iron-sulfur subunit [Bradyrhizobium japonicum USDA 110] Length = 198 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADGVVLHSKDLCIGCGYCFYACPFGAP-------- 102 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K+ + + + T P A DG K++YEKY Sbjct: 103 -QYPKVGNFGSRGKMDKCTYCAGGPEA---DGSKEEYEKY 138 >gi|256751333|ref|ZP_05492212.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749715|gb|EEU62740.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 372 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|164687083|ref|ZP_02211111.1| hypothetical protein CLOBAR_00709 [Clostridium bartlettii DSM 16795] gi|164603968|gb|EDQ97433.1| hypothetical protein CLOBAR_00709 [Clostridium bartlettii DSM 16795] Length = 67 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C + CP D G++ +I+ DEC+DCG C CP DAI + Sbjct: 12 MAYKITDECIACG--SCADECPNDAITAGDDKYSINADECLDCGSCADACPNDAIVEE 67 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 DECI CG C ECP DAI + Sbjct: 12 MAYKITDECIACGSCADECPNDAITAGDD 40 >gi|257466098|ref|ZP_05630409.1| hydrogenase, Fe-only [Fusobacterium gonidiaformans ATCC 25563] gi|315917255|ref|ZP_07913495.1| hydrogenase [Fusobacterium gonidiaformans ATCC 25563] gi|313691130|gb|EFS27965.1| hydrogenase [Fusobacterium gonidiaformans ATCC 25563] Length = 652 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + C CG C CPV AI Sbjct: 219 FKITEKCIGC--TACARVCPVQCITGAPKKRHFLDTSRCTHCGQCVSACPVGAIFEGD 274 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ L + D Sbjct: 252 TSRCTHCGQ--CVSACPVGAIFEGDHTLKLLKD 282 >gi|323701729|ref|ZP_08113400.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] gi|323533265|gb|EGB23133.1| Ferredoxin hydrogenase [Desulfotomaculum nigrificans DSM 574] Length = 467 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+ C C C CP +N I CI+CG C CP AI T P Sbjct: 93 YVVTDACQNCVAHPCRNSCPKKAISVIQNRAFIDHTVCIECGKCAKACPYHAIIEITRP 151 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 19/64 (29%) Query: 9 CILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCGVCEPECP 51 CI C C + CP E I D C+ CG+C CP Sbjct: 130 CIECG--KCAKACPYHAIIEITRPCERACALKAVKIDDSRKAVIDSDRCVSCGMCVTVCP 187 Query: 52 VDAI 55 AI Sbjct: 188 FGAI 191 >gi|300703376|ref|YP_003744978.1| formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] gi|299071039|emb|CBJ42348.1| Formate dehydrogenase iron-sulfur subunit [Ralstonia solanacearum CFBP2957] Length = 228 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + ++ Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 108 >gi|257452106|ref|ZP_05617405.1| hydrogenase, Fe-only [Fusobacterium sp. 3_1_5R] gi|317058652|ref|ZP_07923137.1| hydrogenase [Fusobacterium sp. 3_1_5R] gi|313684328|gb|EFS21163.1| hydrogenase [Fusobacterium sp. 3_1_5R] Length = 652 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + C CG C CPV AI Sbjct: 219 FKITEKCIGC--TACARVCPVQCITGAPKKRHFLDTSRCTHCGQCVSACPVGAIFEGD 274 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ L + D Sbjct: 252 TSRCTHCGQ--CVSACPVGAIFEGDHTLKLLKD 282 >gi|167756634|ref|ZP_02428761.1| hypothetical protein CLORAM_02171 [Clostridium ramosum DSM 1402] gi|237733922|ref|ZP_04564403.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167702809|gb|EDS17388.1| hypothetical protein CLORAM_02171 [Clostridium ramosum DSM 1402] gi|229383003|gb|EEO33094.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 507 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 27/51 (52%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ C C C+EVCP + + I D+CI CG+C+ CP DAI Sbjct: 115 VSSGCQACLAHPCIEVCPKNAISFKDGKAYIDQDKCIKCGLCKTNCPYDAI 165 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF---------------YEGENF--LAIHPDECIDCG 44 Y+ + CI C C CP D E + + I+ D+C+ CG Sbjct: 143 AYIDQDKCIKCGL--CKTNCPYDAILKRERPCAKACGMDAIETDEYGNAHINYDKCVSCG 200 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 201 MCLVSCPFGAI 211 >gi|167038788|ref|YP_001661773.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter sp. X514] gi|300913627|ref|ZP_07130944.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307723358|ref|YP_003903109.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter sp. X513] gi|166853028|gb|ABY91437.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter sp. X514] gi|300890312|gb|EFK85457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X561] gi|307580419|gb|ADN53818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter sp. X513] Length = 372 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|167038468|ref|YP_001666046.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116862|ref|YP_004187021.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857302|gb|ABY95710.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929953|gb|ADV80638.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 372 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ + I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNSSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|113868891|ref|YP_727380.1| formate dehydrogenase iron-sulfur subunit [Ralstonia eutropha H16] gi|113527667|emb|CAJ94012.1| formate dehydrogenase iron-sulfur subunit [Ralstonia eutropha H16] Length = 225 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 ++ C+ C C+ VCPVDCFY E+ + +H D CI CG C CP A + + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYRTEDGVVLHDKDVCIGCGYCSYACPFGAPQFPS 107 >gi|326389280|ref|ZP_08210848.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325994643|gb|EGD53067.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 372 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|83311771|ref|YP_422035.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82946612|dbj|BAE51476.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 211 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + + Sbjct: 54 ACMHCSDAPCMAVCPVDCFYQTGDGIVLHNKDLCIGCGYCFYACPFGAPQYPSTGNFGGR 113 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 K++ T P A +KY Sbjct: 114 GKMDK---------CTFCAGGPEADHSKAELEKY 138 >gi|289577411|ref|YP_003476038.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] gi|289527124|gb|ADD01476.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter italicus Ab9] Length = 372 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|167747433|ref|ZP_02419560.1| hypothetical protein ANACAC_02153 [Anaerostipes caccae DSM 14662] gi|317471162|ref|ZP_07930533.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|167652795|gb|EDR96924.1| hypothetical protein ANACAC_02153 [Anaerostipes caccae DSM 14662] gi|316901377|gb|EFV23320.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 56 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ CI C C CP EG+ I D C+DCG C CP AI + Sbjct: 1 MAYVISDACISCG--ACEGTCPAGAISEGDGQYVIDADTCLDCGACADGCPTGAISQE 56 >gi|237654364|ref|YP_002890678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237625611|gb|ACR02301.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 212 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY+ E+ + +H D+CI CG C CP A + P Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYKTEDGVVLHDKDKCIGCGYCFYACPFGAPQFPNGPA- 109 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + A + T P + G +YEKY Sbjct: 110 -------AFGARGKMDKCTFCAGGP---EETGSAAEYEKY 139 >gi|153853057|ref|ZP_01994466.1| hypothetical protein DORLON_00451 [Dorea longicatena DSM 13814] gi|149753843|gb|EDM63774.1| hypothetical protein DORLON_00451 [Dorea longicatena DSM 13814] Length = 503 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+EVCP I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCMEVCPKGAISMVNGKSYIDQEKCIKCGKCKSVCPYDAISKKERP 175 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D + E ++PD+C+ CG Sbjct: 147 SYIDQEKCIKCG--KCKSVCPYDAISKKERPCAKACGVNAIENDKVGRAYVNPDKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVNCPFGAISD 217 >gi|297543698|ref|YP_003676000.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841473|gb|ADH59989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 372 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|89902029|ref|YP_524500.1| 4Fe-4S ferredoxin [Rhodoferax ferrireducens T118] gi|89346766|gb|ABD70969.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodoferax ferrireducens T118] Length = 210 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCAYACPFGAPQFPSQGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K + +G + ++EKY Sbjct: 111 GVRGKMD------------KCTFCAGGPETNGSQAEFEKY 138 >gi|254512467|ref|ZP_05124534.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium KLH11] gi|221536178|gb|EEE39166.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium KLH11] Length = 169 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 23 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQY 76 >gi|33601105|ref|NP_888665.1| formate dehydrogenase iron-sulfur subunit [Bordetella bronchiseptica RB50] gi|33575540|emb|CAE32618.1| formate dehydrogenase iron-sulfur subunit [Bordetella bronchiseptica RB50] Length = 209 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + +E Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQFPSEGAF 110 Query: 64 ELWLKIN 70 + K++ Sbjct: 111 GVRGKMD 117 >gi|33596552|ref|NP_884195.1| formate dehydrogenase iron-sulfur subunit [Bordetella parapertussis 12822] gi|33566321|emb|CAE37234.1| formate dehydrogenase iron-sulfur subunit [Bordetella parapertussis] Length = 209 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + +E Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQFPSEGAF 110 Query: 64 ELWLKIN 70 + K++ Sbjct: 111 GVRGKMD 117 >gi|323485418|ref|ZP_08090766.1| hypothetical protein HMPREF9474_02517 [Clostridium symbiosum WAL-14163] gi|323694183|ref|ZP_08108360.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium symbiosum WAL-14673] gi|323401281|gb|EGA93631.1| hypothetical protein HMPREF9474_02517 [Clostridium symbiosum WAL-14163] gi|323501760|gb|EGB17645.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium symbiosum WAL-14673] Length = 56 Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+T++C+ C C CPV +G+ I + CIDCG C CP AI+ + Sbjct: 1 MAYVITDSCVSCG--ACAGDCPVGAISQGDGKYEIDANTCIDCGSCAGSCPTGAIEQE 56 >gi|134299648|ref|YP_001113144.1| hydrogenase large subunit [Desulfotomaculum reducens MI-1] gi|134052348|gb|ABO50319.1| hydrogenase large subunit domain protein [Desulfotomaculum reducens MI-1] Length = 462 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVVT+ C C C CP +N I + C++CG C CP +AI T P Sbjct: 93 YVVTDACQNCVAHPCRNSCPKKAISVIQNRAFIDQNSCVECGKCANACPYNAIIEVTRP 151 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCG 44 ++ +C+ C C CP + E I + C CG Sbjct: 123 AFIDQNSCVECG--KCANACPYNAIIEVTRPCERACALKAIKVDDSRKAVIDHELCASCG 180 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 181 LCVTVCPFGAI 191 >gi|289422669|ref|ZP_06424509.1| hydrogenase large subunit domain protein [Peptostreptococcus anaerobius 653-L] gi|289156848|gb|EFD05473.1| hydrogenase large subunit domain protein [Peptostreptococcus anaerobius 653-L] Length = 515 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + T C C CVEVCP + I ++CI CG C+ CP AI P Sbjct: 116 FFTTNTCRGCLARPCVEVCPKNAISMVNGKSFIDQEKCIKCGRCKSSCPYGAIAKLERP 174 >gi|332654222|ref|ZP_08419966.1| Fe-hydrogenase large subunit family protein [Ruminococcaceae bacterium D16] gi|332517308|gb|EGJ46913.1| Fe-hydrogenase large subunit family protein [Ruminococcaceae bacterium D16] Length = 505 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 VT C C C+EVCP D + I +CI CG C CP AI P E Sbjct: 116 VTNMCQGCLAHPCMEVCPKDAISLVQGKSFIDQTKCIKCGKCADACPYGAILKLERPCAE 175 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 19/66 (28%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCGVCEPECP 51 CI C C + CP + E A I D+C+ CG+C CP Sbjct: 151 CIKCG--KCADACPYGAILKLERPCAEACGMDAIGSDELGRAKIDYDKCVSCGMCLVNCP 208 Query: 52 VDAIKP 57 AI Sbjct: 209 FGAISD 214 >gi|218781349|ref|YP_002432667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762733|gb|ACL05199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 369 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C C C +VCPV + I CI CG C CP AI PD + Sbjct: 190 VNKEKCTGCG--SCEDVCPVGAAKLEDEISIIDAKVCIGCGECMTVCPEKAINPDWATDI 247 Query: 64 ELWLKINSEYA 74 +++ +EYA Sbjct: 248 GAFMERMTEYA 258 >gi|154502471|ref|ZP_02039531.1| hypothetical protein RUMGNA_00284 [Ruminococcus gnavus ATCC 29149] gi|153796867|gb|EDN79287.1| hypothetical protein RUMGNA_00284 [Ruminococcus gnavus ATCC 29149] Length = 506 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP I ++CI CG C+ CP DAI P Sbjct: 119 YEVSNMCKGCLAHPCSEVCPKGAISMVNGKSYIDQEKCIKCGKCKAVCPYDAIAKKERP 177 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 25/99 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D + E I ++C+ CG Sbjct: 149 SYIDQEKCIKCG--KCKAVCPYDAIAKKERPCKNACGVGAIVSDKYGRAYIDTEKCVSCG 206 Query: 45 VCEPECPVDA------IKPDTEPGLELWLKINSEYATQW 77 +C CP A I T E +I +E A + Sbjct: 207 MCMVSCPFGAISDKSQIFQLTRALQEEGSEIIAEIAPAF 245 >gi|227871720|ref|ZP_03990129.1| ferredoxin hydrogenase [Oribacterium sinus F0268] gi|227842429|gb|EEJ52650.1| ferredoxin hydrogenase [Oribacterium sinus F0268] Length = 488 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +Y VT+NC LC C C + I P +C +CG+C CP AI T P Sbjct: 95 SYSVTDNCRLCLGKACQNSCHFGAITMTDQRAHIDPMKCKECGMCATACPYSAIAQLTRP 154 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C + CPV+ EN L I + CI CG C CP AI Sbjct: 153 RPCKKPCPVNAITYDENGLCVIDDNRCIRCGQCVHSCPFGAI 194 >gi|239817031|ref|YP_002945941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239803608|gb|ACS20675.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 207 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV CFY E + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVQCFYRTEEGVVLHDKDVCIGCGYCSYACPFGAPQFPSQGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ T P A +G + ++EKY Sbjct: 111 GVRGKMDK---------CTFCAGGPEA---NGSEAEFEKY 138 >gi|163794797|ref|ZP_02188767.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159180070|gb|EDP64595.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 197 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFYE + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYESNEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|145218852|ref|YP_001129561.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205016|gb|ABP36059.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeovibrioides DSM 265] Length = 522 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C C+ CV++CPV+ ++ ++ + CI C C CP +A+ D E Sbjct: 51 YFTVLRCNHCEEPPCVDICPVEALHKRDDGIVDFDSRRCIGCKACAQACPYNAVYIDPES 110 Query: 62 G 62 G Sbjct: 111 G 111 >gi|317502269|ref|ZP_07960441.1| 4Fe-4S ferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|331089012|ref|ZP_08337919.1| ferredoxin [Lachnospiraceae bacterium 3_1_46FAA] gi|316896330|gb|EFV18429.1| 4Fe-4S ferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|330406464|gb|EGG85977.1| ferredoxin [Lachnospiraceae bacterium 3_1_46FAA] Length = 56 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV EG+ I D C+DCG CE CP AI + Sbjct: 1 MAHVISDECVSCG--SCEAECPVGAISEGDGKYEIDADACVDCGACEAACPTGAISAE 56 >gi|125974593|ref|YP_001038503.1| 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium thermocellum ATCC 27405] gi|125714818|gb|ABN53310.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium thermocellum ATCC 27405] Length = 60 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T+ CI C C CPV C G++ I D CI+CG C CPVDA + Sbjct: 5 MAYFITDACISCG--ACESECPVSCISPGDSVYVIDADACIECGACANVCPVDAPQQ 59 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 13/28 (46%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D CI CG CE ECPV I P Sbjct: 5 MAYFITDACISCGACESECPVSCISPGD 32 >gi|288575184|ref|ZP_06393540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568466|gb|EFC90024.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 288 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C+ C C CPV I D CI CG C CP AI D + Sbjct: 148 VDDEKCVGCG--RCFRNCPVKAISMTGGKAVIDKDVCIGCGECLTVCPASAISLDWRTDV 205 Query: 64 ELWLKINSEYA 74 + + +EYA Sbjct: 206 VQFHRRMAEYA 216 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 +++ ++C+ CG C CPV AI Sbjct: 146 MSVDDEKCVGCGRCFRNCPVKAI 168 >gi|259416768|ref|ZP_05740688.1| formate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] gi|259348207|gb|EEW59984.1| formate dehydrogenase iron-sulfur subunit [Silicibacter sp. TrichCH4B] Length = 197 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|153814717|ref|ZP_01967385.1| hypothetical protein RUMTOR_00932 [Ruminococcus torques ATCC 27756] gi|145847748|gb|EDK24666.1| hypothetical protein RUMTOR_00932 [Ruminococcus torques ATCC 27756] Length = 503 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 27/62 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y V+ C C C EVCP D I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNICKGCLAHPCQEVCPKDAISMVNGRSYIDQEKCIKCGKCKSVCPYDAIAKKERPC 176 Query: 63 LE 64 + Sbjct: 177 QK 178 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D + E I ++C+ CG Sbjct: 147 SYIDQEKCIKCG--KCKSVCPYDAIAKKERPCQKACGVNAIKSDKMGRAYIDNEKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVSCPFGAISD 217 >gi|99080243|ref|YP_612397.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036523|gb|ABF63135.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 197 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|317500246|ref|ZP_07958476.1| Fe-hydrogenase large subunit family protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331087521|ref|ZP_08336454.1| hypothetical protein HMPREF1025_00037 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898372|gb|EFV20413.1| Fe-hydrogenase large subunit family protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330404066|gb|EGG83615.1| hypothetical protein HMPREF1025_00037 [Lachnospiraceae bacterium 3_1_46FAA] Length = 503 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 27/62 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y V+ C C C EVCP D I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNICKGCLAHPCQEVCPKDAISMVNGRSYIDQEKCIKCGKCKSVCPYDAIAKKERPC 176 Query: 63 LE 64 + Sbjct: 177 QK 178 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D + E I ++C+ CG Sbjct: 147 SYIDQEKCIKCG--KCKSVCPYDAIAKKERPCQKACGVNAIKSDKMGRAYIDNEKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVSCPFGAISD 217 >gi|331091265|ref|ZP_08340106.1| hypothetical protein HMPREF9477_00749 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404712|gb|EGG84251.1| hypothetical protein HMPREF9477_00749 [Lachnospiraceae bacterium 2_1_46FAA] Length = 502 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 27/62 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y V+ C C C EVCPV + I +CI CG C+ CP DAI P Sbjct: 116 YEVSNMCKGCVAHPCKEVCPVGAISMKDGHSFIDQTKCIKCGKCKANCPYDAIAKKERPC 175 Query: 63 LE 64 + Sbjct: 176 QK 177 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 19/66 (28%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPECP 51 CI C C CP D + E I D+C+ CG+C CP Sbjct: 153 CIKCG--KCKANCPYDAIAKKERPCQKSCGVNAIVSDKYGRAKIDNDKCVSCGMCMVSCP 210 Query: 52 VDAIKP 57 AI Sbjct: 211 FGAISD 216 >gi|171060397|ref|YP_001792746.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170777842|gb|ACB35981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 214 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPVDCFY ++ + +H D CI CG C CP A + + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYRTDDGVVLHDKDICIGCGYCSYACPFGAPQFPSNGAF 110 Query: 64 ELWLKIN 70 L K++ Sbjct: 111 GLRGKMD 117 >gi|121535575|ref|ZP_01667382.1| hydrogenase large subunit domain protein [Thermosinus carboxydivorans Nor1] gi|121305815|gb|EAX46750.1| hydrogenase large subunit domain protein [Thermosinus carboxydivorans Nor1] Length = 499 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C+ CP +N I + C++CG+C+ CP AI + P Sbjct: 106 FIVTDACRNCVAHHCINSCPKKAIAVVQNRAFIDKNRCVECGLCKRSCPYGAIIEVSRP 164 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCG 44 ++ C+ C C CP E + I+ D+C+ CG Sbjct: 136 AFIDKNRCVECGL--CKRSCPYGAIIEVSRPCERACDLKAVVAGADRRAVINYDKCVQCG 193 Query: 45 VCEPECPVDAI 55 C+ CP AI Sbjct: 194 ACKIACPFGAI 204 >gi|310827887|ref|YP_003960244.1| hypothetical protein ELI_2298 [Eubacterium limosum KIST612] gi|308739621|gb|ADO37281.1| conserved domain protein [Eubacterium limosum KIST612] Length = 56 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y+++ CI C CV CPV+ +G++ I+ DEC+DCGVCE CP AI + Sbjct: 1 MAYIISGECIACGG--CVTECPVEAISKGDDRYIINADECVDCGVCEETCPTGAIISE 56 >gi|90426047|ref|YP_534417.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] gi|90108061|gb|ABD90098.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] Length = 205 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 2 TYVVTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 TY +T C C+ C VCPVD + + ++ CI C +C CP AI P Sbjct: 42 TYEITAPVQCRHCEDAPCARVCPVDAIKLTDGQVVLNEQTCIGCKMCAIACPFGAITP 99 >gi|323968658|gb|EGB64063.1| DMSO reductase anchor subunit protein [Escherichia coli M863] gi|327252703|gb|EGE64357.1| dimethylsulfoxide reductase, chain B [Escherichia coli STEC_7v] Length = 489 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|307243639|ref|ZP_07525782.1| 4Fe-4S binding domain protein [Peptostreptococcus stomatis DSM 17678] gi|306493008|gb|EFM65018.1| 4Fe-4S binding domain protein [Peptostreptococcus stomatis DSM 17678] Length = 516 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y T+ C C CVEVCP I D CI CG C+ CP DAI P Sbjct: 116 YKTTDICRGCLARPCVEVCPKKAVSMVNGKSFIDQDLCIKCGRCKAVCPYDAIAKLERP 174 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ + CI C C VCP D + E +I D+C+ CG Sbjct: 146 SFIDQDLCIKCG--RCKAVCPYDAIAKLERPCARACGMDAIESDKYGRASIDYDKCVSCG 203 Query: 45 VCEPECPVDAI 55 VC CP AI Sbjct: 204 VCISSCPFGAI 214 >gi|328955718|ref|YP_004373051.1| hydrogenase large subunit domain protein [Coriobacterium glomerans PW2] gi|328456042|gb|AEB07236.1| hydrogenase large subunit domain protein [Coriobacterium glomerans PW2] Length = 517 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y VT C C C E+CP + I D CI+CG C CP AI P Sbjct: 121 YEVTNMCQGCLAHPCREICPTGAVTFVDKKAHIDKDACINCGRCASICPYTAIAHRERPC 180 Query: 63 LELWLKINSEYATQW 77 +N+ + +W Sbjct: 181 AAACG-MNAIASDEW 194 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 ++ + CI C C +CP E I D C+ CG Sbjct: 151 AHIDKDACINCG--RCASICPYTAIAHRERPCAAACGMNAIASDEWGRAEIDYDRCVSCG 208 Query: 45 VCEPECPVDAI 55 C CP AI Sbjct: 209 QCLVNCPFGAI 219 >gi|257463022|ref|ZP_05627425.1| hydrogenase, Fe-only [Fusobacterium sp. D12] Length = 652 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + C CG C CPV AI Sbjct: 219 FKITEKCIGC--TACARVCPVKCIAGAPKKRHFLDTSRCTHCGQCVSACPVGAIFEGD 274 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ L + D Sbjct: 252 TSRCTHCGQ--CVSACPVGAIFEGDHTLKLLKD 282 >gi|229825982|ref|ZP_04452051.1| hypothetical protein GCWU000182_01346 [Abiotrophia defectiva ATCC 49176] gi|229789724|gb|EEP25838.1| hypothetical protein GCWU000182_01346 [Abiotrophia defectiva ATCC 49176] Length = 56 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ + CI C C VCPV+C EG + C+DCG CE CP AI + Sbjct: 1 MAHVINDECISCG--ACASVCPVECISEGSVHYEVDASACVDCGACEESCPTGAIFQE 56 >gi|227501325|ref|ZP_03931374.1| hydrogenase large subunit domain protein [Anaerococcus tetradius ATCC 35098] gi|227216558|gb|EEI81964.1| hydrogenase large subunit domain protein [Anaerococcus tetradius ATCC 35098] Length = 508 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 25/61 (40%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VT+ C C CV VCP + I D+CI CG C CP AI P Sbjct: 114 TVTDQCHACIGHPCVNVCPKNAVSYSAKGAYIDQDKCIKCGKCVDACPYHAINHQKRPCA 173 Query: 64 E 64 E Sbjct: 174 E 174 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 19/76 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 Y+ + CI C CV+ CP + A I+ D+C+ CG Sbjct: 143 AYIDQDKCIKCG--KCVDACPYHAINHQKRPCAESCGVKAISSDDLGRADINEDKCVACG 200 Query: 45 VCEPECPVDAIKPDTE 60 C CP AI +E Sbjct: 201 RCIISCPFGAISDKSE 216 >gi|163858981|ref|YP_001633279.1| formate dehydrogenase, iron-sulfur subunit [Bordetella petrii DSM 12804] gi|163262709|emb|CAP45012.1| Formate dehydrogenase, iron-sulfur subunit [Bordetella petrii] Length = 209 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQFPSQ 107 >gi|300856866|ref|YP_003781850.1| putative iron-dependent hydrogenase [Clostridium ljungdahlii DSM 13528] gi|300436981|gb|ADK16748.1| putative iron-dependent hydrogenase [Clostridium ljungdahlii DSM 13528] Length = 495 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VTE C C C+EVCP + + I+ D C +CG+C+ CP +AI P Sbjct: 104 YRVTEACRGCIQHKCMEVCPAKAISKVDGRAHINQDICKECGMCKKVCPYNAIAEVMRP 162 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDC 43 ++ + C C C +VCP + E I ++CI+C Sbjct: 134 AHINQDICKECG--MCKKVCPYNAIAEVMRPCKKSCPTGALEINSKNRMAMIEKEKCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP A+ Sbjct: 192 GACMAACPFGAVSD 205 >gi|291526378|emb|CBK91965.1| 4Fe-4S binding domain [Eubacterium rectale DSM 17629] gi|291526823|emb|CBK92409.1| 4Fe-4S binding domain [Eubacterium rectale M104/1] Length = 56 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++C+ C C CPV G++ I D C+DCG C CP AI Sbjct: 1 MAYVISDSCVSCG--TCAGECPVGAISAGDSQYVIDADSCLDCGTCAGVCPTGAI 53 >gi|103485838|ref|YP_615399.1| cyclic nucleotide-binding protein [Sphingopyxis alaskensis RB2256] gi|98975915|gb|ABF52066.1| cyclic nucleotide-binding protein [Sphingopyxis alaskensis RB2256] Length = 811 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C C+H C+ CP + + G + CI CG C CP I+ + P + Sbjct: 673 VPTSCRHCEHPHCMADCPPNVIHRGPDGEVFMEPGCIGCGNCMRNCPYGVIRMEAAPPPK 732 Query: 65 L 65 Sbjct: 733 P 733 >gi|56696671|ref|YP_167032.1| formate dehydrogenase, iron-sulfur subunit, putative [Ruegeria pomeroyi DSS-3] gi|56678408|gb|AAV95074.1| formate dehydrogenase, iron-sulfur subunit, putative [Ruegeria pomeroyi DSS-3] Length = 197 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|78189918|ref|YP_380256.1| Fe-S-cluster-containing hydrogenase components 1-like [Chlorobium chlorochromatii CaD3] gi|78172117|gb|ABB29213.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chlorobium chlorochromatii CaD3] Length = 517 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C CV++CPV+ ++ E+ + CI C C CP A+ D E Sbjct: 51 YFTVLRCNHCAEPPCVDICPVEALHKREDGIVDFDKRRCIGCKACAQACPYGALYIDPE 109 >gi|291533213|emb|CBL06326.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Megamonas hypermegale ART12/1] Length = 55 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +T++CI C C CPV EGEN I D C++CG C+ CP AI+ Sbjct: 1 MAYKITDDCISCG--ACAGTCPVGAISEGENHYEIDADMCVECGACQAGCPAGAIE 54 >gi|169335612|ref|ZP_02862805.1| hypothetical protein ANASTE_02032 [Anaerofustis stercorihominis DSM 17244] gi|169258350|gb|EDS72316.1| hypothetical protein ANASTE_02032 [Anaerofustis stercorihominis DSM 17244] Length = 56 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+T+ CI C C CPV EG+ I CIDCG C CP A +P+ Sbjct: 1 MAHVITDECISCG--ACAGECPVGAISEGDGKYEIDAATCIDCGACAGACPTGAAQPE 56 >gi|317050998|ref|YP_004112114.1| hypothetical protein Selin_0818 [Desulfurispirillum indicum S5] gi|316946082|gb|ADU65558.1| hypothetical protein Selin_0818 [Desulfurispirillum indicum S5] Length = 56 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+++ C+ C C CPV +G+ I D CIDCG CE CP AI Sbjct: 1 MAYVISDACVNCG--ACEPECPVSAISQGDAIYVIDADTCIDCGACESVCPSGAI 53 >gi|160881872|ref|YP_001560840.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium phytofermentans ISDg] gi|160430538|gb|ABX44101.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium phytofermentans ISDg] Length = 55 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV+ + CI C C CPV EG + I D C+DCG C CP AI+ Sbjct: 1 MAYVINDGCISCG--ACASECPVGAISEGASHYEIDADACLDCGACASTCPTGAIE 54 >gi|294495829|ref|YP_003542322.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] gi|292666828|gb|ADE36677.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] Length = 369 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 6 TENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E C C CVEVCP D +N I D+CI CG C CPV+AI + E + Sbjct: 193 AEICNGC--ATCVEVCPCDAMEINNDNISTIDDDKCIGCGECMTVCPVEAIGFNYE-NIP 249 Query: 65 LWLKINSEYA 74 ++++ +EYA Sbjct: 250 DFMEMMTEYA 259 >gi|121535881|ref|ZP_01667679.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305546|gb|EAX46490.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 368 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C C VCP + + +I D+CI CG C CPV A+ D L ++L+ Sbjct: 195 CIGC--AKCAAVCPENAITVSDKKASIAVDKCIGCGECLTVCPVKAVGMDWATDLAVFLE 252 Query: 69 INSEYATQWPNITTKK 84 +EYA + K+ Sbjct: 253 RMTEYAYGFAKAHEKR 268 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + + +CI C C CP +AI Sbjct: 187 KIMVDQAKCIGCAKCAAVCPENAI 210 >gi|83855227|ref|ZP_00948757.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. NAS-14.1] gi|83941749|ref|ZP_00954211.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. EE-36] gi|83843070|gb|EAP82237.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. NAS-14.1] gi|83847569|gb|EAP85444.1| formate dehydrogenase, iron-sulfur subunit, putative [Sulfitobacter sp. EE-36] Length = 197 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ ++ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDDGIVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|312143185|ref|YP_003994631.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium sp. 'sapolanicus'] gi|311903836|gb|ADQ14277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium sp. 'sapolanicus'] Length = 56 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+ ++CILC C CPVDC EG+ I DECIDC C CPVDAI Sbjct: 1 MAHVINDDCILCG--ACAPECPVDCISEGDTKYEIDADECIDCAACVSVCPVDAI 53 >gi|169351005|ref|ZP_02867943.1| hypothetical protein CLOSPI_01782 [Clostridium spiroforme DSM 1552] gi|169292067|gb|EDS74200.1| hypothetical protein CLOSPI_01782 [Clostridium spiroforme DSM 1552] Length = 507 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+E+CP + I D+CI CG+C+ CP DAI P Sbjct: 113 YEVSNGCQACLAHPCIEICPKNAISFKNGKAYIDQDKCIKCGLCKNNCPYDAILKKERP 171 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 Y+ + CI C C CP D + E I+ D+C+ CG Sbjct: 143 AYIDQDKCIKCGL--CKNNCPYDAILKKERPCAKACGMNAIESDEYGNAHINYDKCVSCG 200 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 201 MCLVSCPFGAI 211 >gi|291522007|emb|CBK80300.1| 4Fe-4S binding domain [Coprococcus catus GD/7] Length = 56 Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C CPV EG+ I + C+DCG C CP +AI + Sbjct: 1 MAYVISDACVSCG--TCAGECPVGAISEGDGKYVIDANACLDCGSCAGACPTEAISQE 56 >gi|325280763|ref|YP_004253305.1| ferredoxin [Odoribacter splanchnicus DSM 20712] gi|324312572|gb|ADY33125.1| ferredoxin [Odoribacter splanchnicus DSM 20712] Length = 56 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C CPV G + I P+ C DCG C CPV+AIK Sbjct: 1 MAYVISDDCISCG--TCEGECPVGAISMGADHYEIDPNACTDCGTCAGVCPVEAIKQ 55 >gi|114763304|ref|ZP_01442728.1| formate dehydrogenase, iron-sulfur subunit, putative [Pelagibaca bermudensis HTCC2601] gi|114544102|gb|EAU47112.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. HTCC2601] Length = 197 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|118591771|ref|ZP_01549167.1| formate dehydrogenase, iron-sulfur subunit, putative [Stappia aggregata IAM 12614] gi|118435764|gb|EAV42409.1| formate dehydrogenase, iron-sulfur subunit, putative [Stappia aggregata IAM 12614] Length = 197 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTEEGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|317133838|ref|YP_004089749.1| hydrogenase large subunit domain protein [Ruminococcus albus 7] gi|315450300|gb|ADU23863.1| hydrogenase large subunit domain protein [Ruminococcus albus 7] Length = 478 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C +VCP N + I +CI+CG C CP AI P Sbjct: 94 YEVTDSCRGCLAHRCEDVCPRGAISFDHNHVAHIDKSKCIECGRCSKVCPYSAITNRVRP 153 Query: 62 GL 63 Sbjct: 154 CQ 155 >gi|254485944|ref|ZP_05099149.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseobacter sp. GAI101] gi|214042813|gb|EEB83451.1| 4Fe-4S ferredoxin, iron-sulfur binding [Roseobacter sp. GAI101] Length = 197 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ ++ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDDGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|218961482|ref|YP_001741257.1| putative [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha (hymC-like) [Candidatus Cloacamonas acidaminovorans] gi|167730139|emb|CAO81051.1| putative [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit alpha (hymC-like) [Candidatus Cloacamonas acidaminovorans] Length = 435 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++ +NC C T CV VCP + ++ I P C+DCG C C AI P ++P Sbjct: 12 ILADNCTGC--TACVRVCPTEAIRVRDHKANIDPYRCVDCGNCVNVCRFHAIIPLSDP 67 Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D C C C CP +AI+ Sbjct: 10 LQILADNCTGCTACVRVCPTEAIR 33 >gi|154150339|ref|YP_001403957.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998891|gb|ABS55314.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 368 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C C EVCP I D CI C C CPV AI+ D E + L+ + Sbjct: 195 CTGCG--KCTEVCPKSAITLRNKKSVIDKDLCIGCFECMTVCPVHAIEVDWETEIPLFTE 252 Query: 69 INSEYA 74 EYA Sbjct: 253 RMVEYA 258 >gi|304316617|ref|YP_003851762.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778119|gb|ADL68678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 56 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +++T+ CI C C CPV+ +EG + D CIDCG CE CP A+K + Sbjct: 1 MAHIITDECISCG--ACAAECPVEAIHEGTGKYEVDADTCIDCGACEAVCPTGAVKAE 56 >gi|257066859|ref|YP_003153115.1| hydrogenase large subunit domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798739|gb|ACV29394.1| hydrogenase large subunit domain protein [Anaerococcus prevotii DSM 20548] Length = 508 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 25/61 (40%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VT+ C C CV VCP + I D+CI CG C CP AI P Sbjct: 114 TVTDQCHACIGHPCVNVCPKNAVTYTAKGAIIDQDKCIKCGKCVAACPYQAINHQKRPCA 173 Query: 64 E 64 E Sbjct: 174 E 174 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 19/71 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--------------GENFL---AIHPDECIDCGVCEPE 49 + CI C CV CP G + L I D+C+ CG C Sbjct: 148 DKCIKCG--KCVAACPYQAINHQKRPCAESCGVKAIGSDELGRAKIDEDKCVACGRCIIT 205 Query: 50 CPVDAIKPDTE 60 CP AI +E Sbjct: 206 CPFGAISDKSE 216 >gi|298375682|ref|ZP_06985639.1| ferredoxin 2 [Bacteroides sp. 3_1_19] gi|298268182|gb|EFI09838.1| ferredoxin 2 [Bacteroides sp. 3_1_19] Length = 459 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGC--THCMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D CI C C ECP AI+ Sbjct: 10 LKIDNDRCIGCTHCMKECPTGAIR 33 >gi|121603744|ref|YP_981073.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120592713|gb|ABM36152.1| formate dehydrogenase beta subunit [Polaromonas naphthalenivorans CJ2] Length = 206 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + + Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDICIGCGYCSYACPFGAPQFPSTGSF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K +++G + ++EKY Sbjct: 111 GVRGKMD------------KCTFCAGGPEVNGSQAEFEKY 138 >gi|149375897|ref|ZP_01893664.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] gi|149359777|gb|EDM48234.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Marinobacter algicola DG893] Length = 202 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E+ + +H D CI CG C CP A + Sbjct: 56 ISVACMHCSDAPCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQF 109 >gi|121595757|ref|YP_987653.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222111960|ref|YP_002554224.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120607837|gb|ABM43577.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221731404|gb|ACM34224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 206 Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPV+CFY E + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTEEGVVLHDKDVCIGCGYCSYACPFGAPQFPSQ 107 >gi|225570648|ref|ZP_03779671.1| hypothetical protein CLOHYLEM_06748 [Clostridium hylemonae DSM 15053] gi|225160566|gb|EEG73185.1| hypothetical protein CLOHYLEM_06748 [Clostridium hylemonae DSM 15053] Length = 274 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 29/62 (46%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y V+ C C C+EVCP D + I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNMCKGCLAHPCMEVCPKDAVSMVKGRSYIDQEKCIKCGKCKSVCPYDAISRKERPC 176 Query: 63 LE 64 + Sbjct: 177 QK 178 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +Y+ E CI C C VCP D E I+ ++C+ CG Sbjct: 147 SYIDQEKCIKCG--KCKSVCPYDAISRKERPCQKACGVGAIESDNCGRARINNEKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVSCPFGAISD 217 >gi|23014297|ref|ZP_00054120.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 196 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + + Sbjct: 54 ACMHCSDAPCMAVCPVDCFYQTSDGIVLHNKDLCIGCGYCFYACPFGAPQYPSTGNFGGR 113 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 K++ T P A +KY Sbjct: 114 GKMDK---------CTFCAGGPEADNSKAELEKY 138 >gi|126727364|ref|ZP_01743199.1| formate dehydrogenase, iron-sulfur subunit, putative [Rhodobacterales bacterium HTCC2150] gi|126703359|gb|EBA02457.1| formate dehydrogenase, iron-sulfur subunit, putative [Rhodobacterales bacterium HTCC2150] Length = 197 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQSEEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|91786840|ref|YP_547792.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91696065|gb|ABE42894.1| formate dehydrogenase beta subunit [Polaromonas sp. JS666] Length = 205 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV+CFY + + +H D CI CG C CP A + + Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHDKDVCIGCGYCSYACPFGAPQFPSSGTF 110 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + K++ K +++G + ++EKY Sbjct: 111 GVRGKMD------------KCTFCAGGPEVNGSQAEFEKY 138 >gi|325264637|ref|ZP_08131367.1| conserved domain protein [Clostridium sp. D5] gi|324030299|gb|EGB91584.1| conserved domain protein [Clostridium sp. D5] Length = 56 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + + C+ C C CPV EG+ I D C+DCG CE CP AI+ + Sbjct: 1 MAHFINDECVSCG--SCEGECPVGAIAEGDGKYVIDADACVDCGACEGACPTGAIQAE 56 >gi|255013558|ref|ZP_05285684.1| ferredoxin 2 [Bacteroides sp. 2_1_7] Length = 459 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGC--THCMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D CI C C ECP AI+ Sbjct: 10 LKIDNDRCIGCTHCMKECPTGAIR 33 >gi|256840003|ref|ZP_05545512.1| ferredoxin 2 [Parabacteroides sp. D13] gi|256738933|gb|EEU52258.1| ferredoxin 2 [Parabacteroides sp. D13] Length = 459 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGC--THCMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D CI C C ECP AI+ Sbjct: 10 LKIDNDRCIGCTHCMKECPTGAIR 33 >gi|150007737|ref|YP_001302480.1| ferredoxin 2 [Parabacteroides distasonis ATCC 8503] gi|301310227|ref|ZP_07216166.1| ferredoxin 2 [Bacteroides sp. 20_3] gi|149936161|gb|ABR42858.1| ferredoxin 2 [Parabacteroides distasonis ATCC 8503] gi|300831801|gb|EFK62432.1| ferredoxin 2 [Bacteroides sp. 20_3] Length = 459 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGC--THCMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D CI C C ECP AI+ Sbjct: 10 LKIDNDRCIGCTHCMKECPTGAIR 33 >gi|262381755|ref|ZP_06074893.1| ferredoxin 2 [Bacteroides sp. 2_1_33B] gi|262296932|gb|EEY84862.1| ferredoxin 2 [Bacteroides sp. 2_1_33B] Length = 459 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T C++ CP + IH D C+DCG C CP +AI + + ++ Sbjct: 15 DRCIGC--THCMKECPTGAIRIRDGKALIHKDWCVDCGECLKSCPTEAIYVEQDDFQRIF 72 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D CI C C ECP AI+ Sbjct: 10 LKIDNDRCIGCTHCMKECPTGAIR 33 >gi|94968068|ref|YP_590116.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94550118|gb|ABF40042.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 84 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 12/84 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPV 52 M +V+ + C K C++ CP + + E + L I+P+EC+DCG C CP Sbjct: 1 MAHVIVDTC--EKDMLCIDSCPSNAIHPLKEETEWEAASQLYINPEECMDCGACISTCPT 58 Query: 53 DAIK--PDTEPGLELWLKINSEYA 74 ++I + ++ N+ Y Sbjct: 59 NSIYLAEEVPADKAEFVAKNAAYY 82 >gi|325288816|ref|YP_004264997.1| ferridoxin [Syntrophobotulus glycolicus DSM 8271] gi|324964217|gb|ADY54996.1| ferridoxin [Syntrophobotulus glycolicus DSM 8271] Length = 56 Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T++CI C CV+ CP + EG++ I D C DCGVC C +AI Sbjct: 1 MAYVITDDCISCG--ACVDECPANAISEGDSKYVIDADSCADCGVCVDACAANAI 53 >gi|160934887|ref|ZP_02082273.1| hypothetical protein CLOLEP_03762 [Clostridium leptum DSM 753] gi|156866340|gb|EDO59712.1| hypothetical protein CLOLEP_03762 [Clostridium leptum DSM 753] Length = 56 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +++ CI C C CPV+ EG+ I D CIDCG C CPV A + + Sbjct: 1 MAYKISDECISCG--ACEAGCPVNAISEGDGKYVIDADTCIDCGACADACPVGAPQAE 56 >gi|157963947|ref|YP_001503981.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848947|gb|ABV89446.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 195 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 10/88 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY E+ + +H + CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKETCIGCGYCFYACPFGAP-------- 104 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAA 91 + + N+ + + T P Sbjct: 105 -QFPQKNAFGSRGKMDKCTFCAGGPEPD 131 >gi|78043298|ref|YP_360068.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995413|gb|ABB14312.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 893 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 4 VVTENCILCKHTDCVEVCP--VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ E C C CV VCP V G+N I P C CG+C ECP AI + P Sbjct: 820 VIEEKCAACL--TCVRVCPYSVPVVINGKNVAYIDPISCQGCGICASECPNKAIVQNNRP 877 Query: 62 GLELWLKI 69 + +I Sbjct: 878 HHGVLAEI 885 >gi|317060630|ref|ZP_07925115.1| hydrogenase [Fusobacterium sp. D12] gi|313686306|gb|EFS23141.1| hydrogenase [Fusobacterium sp. D12] Length = 599 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + C CG C CPV AI Sbjct: 166 FKITEKCIGC--TACARVCPVKCIAGAPKKRHFLDTSRCTHCGQCVSACPVGAIFEGD 221 Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ L + D Sbjct: 199 TSRCTHCGQ--CVSACPVGAIFEGDHTLKLLKD 229 >gi|302392756|ref|YP_003828576.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302204833|gb|ADL13511.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 55 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + + C+ C CVE CPVD EG++ I DEC++CG C CPV+AI+ Sbjct: 1 MAYTINDECVDCG--TCVEECPVDAIIEGDDHFEIDEDECVECGNCLDACPVEAIEE 55 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 16/30 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 DEC+DCG C ECPVDAI + Sbjct: 1 MAYTINDECVDCGTCVEECPVDAIIEGDDH 30 >gi|187934556|ref|YP_001884438.1| hypothetical protein CLL_A0202 [Clostridium botulinum B str. Eklund 17B] gi|188590020|ref|YP_001919636.1| hypothetical protein CLH_0200 [Clostridium botulinum E3 str. Alaska E43] gi|251778001|ref|ZP_04820921.1| ferredoxin, 4Fe-4S [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|187722709|gb|ACD23930.1| ferredoxin, 4Fe-4S [Clostridium botulinum B str. Eklund 17B] gi|188500301|gb|ACD53437.1| ferredoxin, 4Fe-4S [Clostridium botulinum E3 str. Alaska E43] gi|243082316|gb|EES48206.1| ferredoxin, 4Fe-4S [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 56 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ ++C+ C C CPVD +G+ + I D CIDCG C CPV A + Sbjct: 1 MAFVINDSCVSCG--ACAGECPVDAISQGDAYYVIDADTCIDCGNCANVCPVGAPVQE 56 >gi|167768244|ref|ZP_02440297.1| hypothetical protein CLOSS21_02800 [Clostridium sp. SS2/1] gi|317497791|ref|ZP_07956103.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167709768|gb|EDS20347.1| hypothetical protein CLOSS21_02800 [Clostridium sp. SS2/1] gi|291560258|emb|CBL39058.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [butyrate-producing bacterium SSC/2] gi|316894904|gb|EFV17074.1| 4Fe-4S binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 56 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ CI C C CP EG+ I D C++CG C CP AI + Sbjct: 1 MAYVISDACISCG--ACEGTCPAGAISEGDGQYVIDADTCMECGACADGCPAGAISQE 56 >gi|310659593|ref|YP_003937314.1| ferredoxin [Clostridium sticklandii DSM 519] gi|322510027|sp|P80168|FER_CLOSD RecName: Full=Ferredoxin gi|308826371|emb|CBH22409.1| Ferredoxin [Clostridium sticklandii] Length = 56 Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV+ G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYVINDSCISCG--ACEPECPVNAITAGDDKYVIDAATCIDCGACAGVCPVDAPQPE 56 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 17/29 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + D CI CG CEPECPV+AI + Sbjct: 1 MAYVINDSCISCGACEPECPVNAITAGDD 29 >gi|319764052|ref|YP_004127989.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|330823673|ref|YP_004386976.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] gi|317118613|gb|ADV01102.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alicycliphilus denitrificans BC] gi|329309045|gb|AEB83460.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alicycliphilus denitrificans K601] Length = 206 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C+ VCPV+CFY E + +H D CI CG C CP A + + Sbjct: 51 ISVACMHCSDAPCMAVCPVNCFYRTEEGIVLHDKDVCIGCGYCSYACPFGAPQFPAQ 107 >gi|228471147|ref|ZP_04055966.1| conserved domain protein [Porphyromonas uenonis 60-3] gi|228307087|gb|EEK16161.1| conserved domain protein [Porphyromonas uenonis 60-3] Length = 54 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M +V+T++C+ C C++ CPV EG + +I D CIDCG C CP AI+ Sbjct: 1 MAHVITDSCVACG--TCIDECPVGAISEG-DIYSIDADTCIDCGACAAACPSGAIE 53 >gi|147918998|ref|YP_687275.1| 2(4Fe-4S) ferredoxin-domain-containing protein [uncultured methanogenic archaeon RC-I] gi|110622671|emb|CAJ37949.1| 2(4Fe-4S) ferredoxin-domain protein [uncultured methanogenic archaeon RC-I] Length = 370 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C C VCP + ++ + + CI CG C CPV +I + E + +++ Sbjct: 196 CVGCG--RCAAVCPRIAVHMEQDIAVVDDEVCIGCGECMTVCPVGSISFNWEKDIVPFME 253 Query: 69 INSEYA 74 + +EYA Sbjct: 254 MMTEYA 259 >gi|169830611|ref|YP_001716593.1| hydrogenase large subunit [Candidatus Desulforudis audaxviator MP104C] gi|169637455|gb|ACA58961.1| hydrogenase large subunit domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 485 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C CP +N I D C++CG+C CP AI + P Sbjct: 94 YFVTDACQNCVAHSCRNSCPKKAISVLQNRAYIDNDSCVECGICAKNCPYYAIVEISRP 152 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 Y+ ++C+ C C + CP E I D+C+ CG Sbjct: 124 AYIDNDSCVECG--ICAKNCPYYAIVEISRPCERSCDMGAIKVDECRRAVIDLDKCVSCG 181 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 182 MCVAVCPFGAI 192 >gi|119717157|ref|YP_924122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nocardioides sp. JS614] gi|119537818|gb|ABL82435.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 505 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV++CP ++ E+ + + CI C C CP DAI D E Sbjct: 57 CNHCTDAPCVKICPTQALFKREDGIVDFDNERCIGCKSCMQACPYDAIYIDAE 109 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 23/63 (36%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPV 52 E CI CK C++ CP D I + +C C C CP Sbjct: 87 ERCIGCK--SCMQACPYDAI-------YIDAETHTAAKCNMCAHRVDEGLEPACVVVCPT 137 Query: 53 DAI 55 +I Sbjct: 138 HSI 140 >gi|194332908|ref|YP_002014768.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194310726|gb|ACF45121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Prosthecochloris aestuarii DSM 271] Length = 515 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C+ CV +CPV+ + E+ + CI C C CP A+ D E Sbjct: 51 YFTVLRCNHCEDPPCVNICPVEALQKREDGIVDFDKRRCIGCKACGQACPYGALYIDPE 109 >gi|160878251|ref|YP_001557219.1| ferredoxin hydrogenase [Clostridium phytofermentans ISDg] gi|160426917|gb|ABX40480.1| Ferredoxin hydrogenase [Clostridium phytofermentans ISDg] Length = 484 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+NC C C + C + I P +C +CG+C CP +AI P Sbjct: 95 FLVTDNCQKCMGKRCQKACNFQAISMSHDRAHIDPAKCKECGMCASACPYNAIADLKRP 153 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 15 TDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 C + CPVD EN + I ++CI+CG C CP AI Sbjct: 152 RPCKKSCPVDAISMDENNIVVIDEEKCINCGQCINNCPFGAISD 195 >gi|325295518|ref|YP_004282032.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065966|gb|ADY73973.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 215 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 30/52 (57%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C VCPV G+N++ ++ ++CIDC +C CP AI+P+ + Sbjct: 59 CRQCDDAPCANVCPVGALRFGKNYIEVYEEKCIDCKMCVMVCPFGAIRPEEK 110 >gi|317125936|ref|YP_004100048.1| polysulphide reductase NrfD [Intrasporangium calvum DSM 43043] gi|315590024|gb|ADU49321.1| Polysulphide reductase NrfD [Intrasporangium calvum DSM 43043] Length = 508 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C CV++CP ++ ++ + D CI C C CP DAI D Sbjct: 57 CNHCTDAPCVKICPTQALFKRDDGIVDFDGDRCIGCKSCMQACPYDAIYID 107 >gi|254459827|ref|ZP_05073243.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2083] gi|206676416|gb|EDZ40903.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 648 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 +C++VCP ++I P C CG C CP AI D P ++ ++N Sbjct: 278 NCLDVCPTGAITPAGEHVSIDPMICAGCGSCSAVCPSGAISSDAPPVDAIFSRLN 332 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP AI KP Sbjct: 495 VDTDACTLCL--SCVSLCPSGALGDNSDLPQLRFQEDACLQCGLCSNICPEKAITLKPQV 552 Query: 60 EPGLELWLK--INSE 72 + + + +N E Sbjct: 553 DLTDNAFNQRVLNEE 567 >gi|300853352|ref|YP_003778336.1| ferredoxin [Clostridium ljungdahlii DSM 13528] gi|300433467|gb|ADK13234.1| ferredoxin [Clostridium ljungdahlii DSM 13528] Length = 57 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y +TE+C+ C C CP D +G++ I P++CI+CG C CPV A ++ Sbjct: 1 MAYKITEDCVSCG--SCASECPADAISQGDSQFVIDPEKCIECGNCANVCPVGAPVEES 57 >gi|239618161|ref|YP_002941483.1| Ferredoxin hydrogenase [Kosmotoga olearia TBF 19.5.1] gi|239506992|gb|ACR80479.1| Ferredoxin hydrogenase [Kosmotoga olearia TBF 19.5.1] Length = 478 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +Y +T+ C C C+ CP + + I ++C+ CG+C CP AI Sbjct: 117 SYHITDMCRNCSAKYCINSCPRNAIPIVDGKPKIDSEKCVGCGLCAKNCPYGAI 170 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 15/73 (20%) Query: 6 TENCILCK--------------HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPEC 50 +E C+ C CV C V Y EN I ++C+ CG C C Sbjct: 152 SEKCVGCGLCAKNCPYGAIIKIQRPCVSACAVGATYSDENGFVLIDDEKCVQCGECAVAC 211 Query: 51 PVDAIKPDTEPGL 63 P AI + G Sbjct: 212 PFGAIVESSSIGQ 224 >gi|210620595|ref|ZP_03292143.1| hypothetical protein CLOHIR_00086 [Clostridium hiranonis DSM 13275] gi|210155309|gb|EEA86315.1| hypothetical protein CLOHIR_00086 [Clostridium hiranonis DSM 13275] Length = 211 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ CI C C+EVCP +C E + N + I+ C+ CG C CPV+AI Sbjct: 154 YFVTDKCINCG--RCIEVCPQNCIVEDQKNWNQVKINHLNCLSCGNCVEVCPVEAI 207 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELW--LKIN 70 D+CI+CG C CP + I D + W +KIN Sbjct: 158 DKCINCGRCIEVCPQNCIVED----QKNWNQVKIN 188 >gi|84514365|ref|ZP_01001729.1| formate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis SKA53] gi|84511416|gb|EAQ07869.1| formate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis SKA53] Length = 198 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCASVCPVDCFYTTDDAVVLHNKDTCIGCGYCSYACPFGAPQY 104 >gi|325479615|gb|EGC82707.1| 4Fe-4S binding domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 509 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 26/61 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VT+ C C CV VCP + I D+CI CG C CP +AI P Sbjct: 114 TVTDQCHACIGHPCVNVCPKNAVTYTAKGAIIDQDKCIKCGKCVSACPYNAINHQKRPCA 173 Query: 64 E 64 E Sbjct: 174 E 174 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCGVCEPE 49 + CI C CV CP + + A I+ D+C+ CG C Sbjct: 148 DKCIKCG--KCVSACPYNAINHQKRPCAESCGVKAISSDELGRADINEDKCVACGRCIIT 205 Query: 50 CPVDAIKPDTE 60 CP AI +E Sbjct: 206 CPFGAISDKSE 216 >gi|320104680|ref|YP_004180271.1| cyclic nucleotide-binding protein [Isosphaera pallida ATCC 43644] gi|319751962|gb|ADV63722.1| cyclic nucleotide-binding protein [Isosphaera pallida ATCC 43644] Length = 790 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP-DTE 60 ++V +C C C+ CPVD L I D CI CG C CP I + E Sbjct: 647 FLVASSCRSCLDPTCLPACPVDAINRNGKSLEIRIKDHCIGCGKCAENCPYGNINMVELE 706 Query: 61 PGLEL 65 P Sbjct: 707 PPRRK 711 >gi|153854059|ref|ZP_01995392.1| hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] gi|149753441|gb|EDM63372.1| hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] Length = 56 Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+ + C+ C C CPV +G + I D C+DCG C +CPV AI Sbjct: 1 MAHVIGDECVSCG--SCEAECPVGAIAQGADHYEIDADACVDCGACAAQCPVGAI 53 >gi|210613377|ref|ZP_03289697.1| hypothetical protein CLONEX_01904 [Clostridium nexile DSM 1787] gi|210151219|gb|EEA82227.1| hypothetical protein CLONEX_01904 [Clostridium nexile DSM 1787] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCG--ACEAECPVGAISQGADHYEIDKDACVDCGACAAQCPTGAISAE 56 >gi|182420065|ref|ZP_02951299.1| conserved domain protein [Clostridium butyricum 5521] gi|237666800|ref|ZP_04526785.1| conserved domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376102|gb|EDT73689.1| conserved domain protein [Clostridium butyricum 5521] gi|237657999|gb|EEP55554.1| ferredoxin, 4Fe-4S [Clostridium butyricum E4 str. BoNT E BL5262] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A + Sbjct: 1 MAFVINDSCVSCG--ACAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGAPVQE 56 >gi|260430249|ref|ZP_05784223.1| formate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] gi|260418721|gb|EEX11977.1| formate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45] Length = 197 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTDEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|325663172|ref|ZP_08151622.1| hypothetical protein HMPREF0490_02363 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086762|ref|ZP_08335839.1| hypothetical protein HMPREF0987_02142 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470626|gb|EGC73856.1| hypothetical protein HMPREF0490_02363 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409928|gb|EGG89363.1| hypothetical protein HMPREF0987_02142 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I+ D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCG--ACEAECPVGAISQGADHYEINADACVDCGACAAQCPTGAISAE 56 >gi|291548248|emb|CBL21356.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus sp. SR1/5] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C CP + +G+ I D C+DCG C CPV AI + Sbjct: 1 MAYVISDECVSCG--TCEGECPNEAISQGDEHYVIDADACVDCGTCAEACPVGAISAE 56 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + DEC+ CG CE ECP +AI E Sbjct: 1 MAYVISDECVSCGTCEGECPNEAISQGDEH 30 >gi|146295776|ref|YP_001179547.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409352|gb|ABP66356.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 57 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C GE I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCG--ACESECPVQCISPGEGKYVINEEECISCGACANVCPVDAPKP 55 >gi|167760379|ref|ZP_02432506.1| hypothetical protein CLOSCI_02753 [Clostridium scindens ATCC 35704] gi|167662052|gb|EDS06182.1| hypothetical protein CLOSCI_02753 [Clostridium scindens ATCC 35704] Length = 382 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV ENCI C +C+ VC D + I D+C+ CG C CP DA+ P + Sbjct: 204 PYVEVENCIGCG--NCIRVCAHDAPKITDRKAFIDHDKCVGCGRCIGVCPKDAVCPPNDE 261 Query: 62 GLELWLKINSEYA 74 ++ K +EY+ Sbjct: 262 SNDILNKKIAEYS 274 >gi|168702048|ref|ZP_02734325.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Gemmata obscuriglobus UQM 2246] Length = 917 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 ++V +C C+ C+E CPVD + G + + + CI CG+CE CP AI Sbjct: 796 FLVATSCRSCQKPYCMEGCPVDAIHRRGAHLEVVIENHCIGCGLCERNCPYGAIH 850 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 24/85 (28%), Gaps = 12/85 (14%) Query: 7 ENCILCKHT--DCVEVCPVDCFYEGENFL----------AIHPDECIDCGVCEPECPVDA 54 + CI+C C EV P + C+ CG C CP A Sbjct: 302 DRCIVCDRCVRACSEVKPFKVIGHTGKGYGTRISFDLDSVMRDSTCVQCGECMNSCPTGA 361 Query: 55 IKPDTEPGLELWLKINSEYATQWPN 79 + W + E PN Sbjct: 362 LSLRRRVRPRAWGDDSPEQVPVNPN 386 >gi|15893595|ref|NP_346944.1| ferredoxin [Clostridium acetobutylicum ATCC 824] gi|15023146|gb|AAK78284.1|AE007545_1 Ferredoxin [Clostridium acetobutylicum ATCC 824] gi|325507715|gb|ADZ19351.1| Ferredoxin [Clostridium acetobutylicum EA 2018] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ C+ C C CPV +G+ I D CI+CG C CPV A + Sbjct: 1 MAYKITDACVSCG--SCASECPVSAISQGDTQFVIDADTCIECGNCANVCPVGAPVQE 56 >gi|306820590|ref|ZP_07454220.1| ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551371|gb|EFM39332.1| ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 56 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ +NCI C C CPV +G+ I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIHDNCISCG--ACEPECPVGAISQGDTQYIIDASACIDCGACASVCPVDAPQPE 56 >gi|221194389|ref|ZP_03567446.1| hydrogenase large subunit domain protein [Atopobium rimae ATCC 49626] gi|221185293|gb|EEE17683.1| hydrogenase large subunit domain protein [Atopobium rimae ATCC 49626] Length = 532 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + V+ C C C E+CP + I ++CI CG+CE CP AI P Sbjct: 123 FRVSNACQGCLAHPCREICPKGAISFVDKKAFIDQEKCIKCGMCEKVCPYHAILHHLRPC 182 Query: 63 LE 64 E Sbjct: 183 AE 184 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 20/86 (23%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDE----------CIDCG 44 ++ E CI C C +VCP E AI DE C+ CG Sbjct: 153 AFIDQEKCIKCG--MCEKVCPYHAILHHLRPCAEACGMHAIGSDEHGRADIDYEKCVSCG 210 Query: 45 VCEPECPVDAIKPDTEPGLELWLKIN 70 C CP AI D ++ IN Sbjct: 211 QCLVNCPFGAI-ADKSQIFQVITAIN 235 >gi|307266103|ref|ZP_07547648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918885|gb|EFN49114.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 372 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +V + C C C+ CPV+ I P CI CG C C IKP + Sbjct: 190 IVGKGCTAC--QMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFVERMTEYA 258 >gi|300857164|ref|YP_003782148.1| putative electron transfer flavoprotein subunit alpha [Clostridium ljungdahlii DSM 13528] gi|300437279|gb|ADK17046.1| predicted electron transfer flavoprotein alpha subunit [Clostridium ljungdahlii DSM 13528] Length = 429 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++T++CI C+ C+ +CP D GE L ++C +CG C CPV A Sbjct: 1 MAVIITDSCIGCE--SCIPICPFDALGINGEGKLVASKEKCTECGKCVSVCPVSA 53 >gi|187250889|ref|YP_001875371.1| Fe-hydrogenase large subunit family protein [Elusimicrobium minutum Pei191] gi|186971049|gb|ACC98034.1| Fe-hydrogenase large subunit family protein [Elusimicrobium minutum Pei191] Length = 478 Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y+VTE C C C+ CP + I P +C +CG C+ CP AI Sbjct: 113 YMVTEVCQGCVARQCIYDCPFNAISMQNGRAYIEPAKCKNCGKCKSACPYGAI------- 165 Query: 63 LELWLKINSEYATQWPNITTKKE 85 LK+N P KK+ Sbjct: 166 ----LKLNVPCEEACPVNAIKKD 184 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 12/60 (20%) Query: 8 NCILCKHT-----------DCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 NC CK C E CPV+ + + I CI CG C CP AI Sbjct: 152 NCGKCKSACPYGAILKLNVPCEEACPVNAIKKDQKGRAIIDHSMCISCGRCMKVCPFGAI 211 >gi|92114039|ref|YP_573967.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91797129|gb|ABE59268.1| formate dehydrogenase beta subunit [Chromohalobacter salexigens DSM 3043] Length = 216 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY+ ++ + +H D CI CG C CP A + E Sbjct: 51 ISVACMHCDDAPCMAVCPTDCFYKTDDGIVLHDKDICIGCGYCLYACPFGAPQFPKEEAF 110 Query: 64 ELWLKIN 70 K++ Sbjct: 111 GERGKMD 117 >gi|319779238|ref|YP_004130151.1| Ferredoxin [Taylorella equigenitalis MCE9] gi|317109262|gb|ADU92008.1| Ferredoxin [Taylorella equigenitalis MCE9] Length = 62 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 47 EPECPVDAIK--PDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYF 104 PECP +AI D + +++IN+E + I+ + LP A + +G K E Sbjct: 1 MPECPANAIFAEEDLPKDQQQFIQINAELTPLFEPISRSIDPLPDADEWNGKPNKLEYLI 60 Query: 105 SP 106 P Sbjct: 61 KP 62 >gi|226323506|ref|ZP_03799024.1| hypothetical protein COPCOM_01281 [Coprococcus comes ATCC 27758] gi|225208190|gb|EEG90544.1| hypothetical protein COPCOM_01281 [Coprococcus comes ATCC 27758] Length = 56 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV G + + I C+DCG CE CP AI + Sbjct: 1 MAHVISDECVSCG--ACESECPVGAISMGADHMQIDASACVDCGACESACPTGAISAE 56 >gi|119094142|gb|ABL60972.1| anaerobic dehydrogenase iron-sulfur subunit [uncultured marine bacterium HF10_19P19] Length = 197 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCTAVCPVDCFYQTDQGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|119899770|ref|YP_934983.1| formate dehydrogenase iron-sulfur subunit [Azoarcus sp. BH72] gi|119672183|emb|CAL96097.1| probable formate dehydrogenase iron-sulfur subunit [Azoarcus sp. BH72] Length = 202 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY+ E + +H D CI CG C CP A + P Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYKAEGGVVLHDKDLCIGCGYCFFACPFGAPQFPNGPA- 109 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + A + T P + G K+++EKY Sbjct: 110 -------AFGARGKMDKCTFCAGGP---EETGSKEEFEKY 139 >gi|150015010|ref|YP_001307264.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149901475|gb|ABR32308.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 56 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A + Sbjct: 1 MAFVINDSCVSCG--ACAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGAPNQE 56 >gi|302340131|ref|YP_003805337.1| Fe-S cluster domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637316|gb|ADK82743.1| Fe-S cluster domain protein [Spirochaeta smaragdinae DSM 11293] Length = 447 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +V CI C T C+ CP + + P+ C+DCG C CPVDAI + + Sbjct: 12 IVEAKCIGC--THCMLTCPTEAIRVFGGKAHVDPNRCVDCGNCMSVCPVDAIVIEQDDFD 69 Query: 64 ELWL 67 +++ Sbjct: 70 QIYT 73 >gi|212705024|ref|ZP_03313152.1| hypothetical protein DESPIG_03092 [Desulfovibrio piger ATCC 29098] gi|212671576|gb|EEB32059.1| hypothetical protein DESPIG_03092 [Desulfovibrio piger ATCC 29098] Length = 480 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ C C C+ C I P++C +CG+C CP AI Sbjct: 116 YYVTDACQGCVARSCIGSCRFGAISFSRGRSTIDPEKCRNCGMCMDACPYHAI 168 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 12/65 (18%) Query: 8 NCILCKHT-----------DCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 NC +C C CPV ++G I ++C CG C CP A+ Sbjct: 155 NCGMCMDACPYHAIVRLNVPCEAACPVRAIHKGNKGRAEIDFEKCTSCGRCMRACPFGAV 214 Query: 56 KPDTE 60 +E Sbjct: 215 MERSE 219 >gi|302384752|ref|YP_003820574.1| ferredoxin [Clostridium saccharolyticum WM1] gi|302195380|gb|ADL02951.1| ferredoxin [Clostridium saccharolyticum WM1] Length = 56 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+++ C+ C C CPV +G++ I D CIDCG CE CP AI Sbjct: 1 MARVISDACVSCG--SCEAECPVSAISQGDSQFVIDADTCIDCGACEGVCPTGAI 53 >gi|126176322|ref|YP_001052471.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|153002606|ref|YP_001368287.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160877327|ref|YP_001556643.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|304412797|ref|ZP_07394399.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307461|ref|ZP_07587196.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|125999527|gb|ABN63602.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] gi|151367224|gb|ABS10224.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160862849|gb|ABX51383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|304348877|gb|EFM13293.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910249|gb|EFN40682.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|315269532|gb|ADT96385.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 198 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|114567614|ref|YP_754768.1| ferredoxin [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338549|gb|ABI69397.1| ferredoxin [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 58 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M+Y++T+ CI C CV+ CPV+ EGE+ I P+ C +CG C CPV+A P + Sbjct: 1 MSYIITDECISCG--ICVDECPVEAISEGEDKFEIDPELCTECGSCADVCPVEAPIPADD 58 >gi|315187269|gb|EFU21025.1| ferredoxin [Spirochaeta thermophila DSM 6578] Length = 56 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+T++C+ C C+ CPV+ EG N I PD+C DCG C CP +AI P Sbjct: 1 MAYVITDDCVACG--TCLPECPVEAISEG-NPYVIDPDKCTDCGSCAEVCPAEAIHP 54 >gi|110680099|ref|YP_683106.1| formate dehydrogenase Fe-S subunit [Roseobacter denitrificans OCh 114] gi|163731481|ref|ZP_02138928.1| formate dehydrogenase Fe-S subunit [Roseobacter litoralis Och 149] gi|109456215|gb|ABG32420.1| formate dehydrogenase Fe-S subunit [Roseobacter denitrificans OCh 114] gi|161394935|gb|EDQ19257.1| formate dehydrogenase Fe-S subunit [Roseobacter litoralis Och 149] Length = 198 Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 52 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQF 105 >gi|312128363|ref|YP_003993237.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|312134414|ref|YP_004001752.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774465|gb|ADQ03952.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311778382|gb|ADQ07868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor hydrothermalis 108] Length = 57 Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCG--ACESECPVQCISPGDGKYVINEEECISCGACANVCPVDAPKP 55 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D+CI CG CE ECPV I P Sbjct: 1 MAYYITDDCISCGACESECPVQCISPGD 28 >gi|310658522|ref|YP_003936243.1| iron-sulfur protein [Clostridium sticklandii DSM 519] gi|308825300|emb|CBH21338.1| putative iron-sulfur protein [Clostridium sticklandii] Length = 418 Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 7/68 (10%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +NCI CK CV VCPV CF + ++ + ++ + C+ CGVC+ C ++AI+ ++ Sbjct: 288 DNCISCK--KCVSVCPVGCFEIKVFNDKDKVVLNSELCLGCGVCQRVCSINAIEM-SKRD 344 Query: 63 LELWLKIN 70 ++++ +N Sbjct: 345 VKIFTPVN 352 >gi|126732914|ref|ZP_01748704.1| formate dehydrogenase, iron-sulfur subunit, putative [Sagittula stellata E-37] gi|126706620|gb|EBA05695.1| formate dehydrogenase, iron-sulfur subunit, putative [Sagittula stellata E-37] Length = 197 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|89092832|ref|ZP_01165784.1| formate dehydrogenase, iron-sulfur subunit [Oceanospirillum sp. MED92] gi|89082857|gb|EAR62077.1| formate dehydrogenase, iron-sulfur subunit [Oceanospirillum sp. MED92] Length = 201 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY+ ++ + +H D CI CG C CP A + ++ Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYQTDDGIVLHNKDLCIGCGYCLYACPFGAPQFPSDAAF 110 Query: 64 ELWLKIN 70 K++ Sbjct: 111 GERGKMD 117 >gi|254474808|ref|ZP_05088194.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214029051|gb|EEB69886.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 197 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|255282942|ref|ZP_05347497.1| conserved domain protein [Bryantella formatexigens DSM 14469] gi|255266481|gb|EET59686.1| conserved domain protein [Bryantella formatexigens DSM 14469] Length = 56 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+++ C+ C C + CP EG+ I D C++CG CE ECP AI + Sbjct: 1 MAYVISDECVSCG--TCADACPAGAISEGDGKYVIDADACLECGTCESECPTGAISAE 56 >gi|329898162|ref|ZP_08272360.1| Ferredoxin [gamma proteobacterium IMCC3088] gi|328920884|gb|EGG28320.1| Ferredoxin [gamma proteobacterium IMCC3088] Length = 56 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 52 VDAIKPDTE--PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 +DAI + E ++L++N+E A WPNI+ KE+ A + G K + Sbjct: 1 MDAIFSEDELPEDQAVFLELNAELAEVWPNISEMKEAPADAEEWTGKPNKLQ 52 >gi|291548594|emb|CBL24856.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus torques L2-14] Length = 56 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+++ C+ C C CPV EG+ I D C+DCG CE CP AI Sbjct: 1 MAHVISDECVSCG--TCEGECPVGAISEGDGKYEIDADACVDCGACEAACPTGAI 53 >gi|114561246|ref|YP_748759.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332539|gb|ABI69921.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 198 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|222528526|ref|YP_002572408.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|312623185|ref|YP_004024798.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|222455373|gb|ACM59635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor bescii DSM 6725] gi|312203652|gb|ADQ46979.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 57 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCG--ACESECPVSCISPGDGKYVINEEECISCGACANVCPVDAPKP 55 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D+CI CG CE ECPV I P Sbjct: 1 MAYYITDDCISCGACESECPVSCISPGD 28 >gi|163736978|ref|ZP_02144396.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis BS107] gi|163740599|ref|ZP_02147993.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis 2.10] gi|161386457|gb|EDQ10832.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis 2.10] gi|161389582|gb|EDQ13933.1| formate dehydrogenase, iron-sulfur subunit, putative [Phaeobacter gallaeciensis BS107] Length = 197 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|283796651|ref|ZP_06345804.1| conserved domain protein [Clostridium sp. M62/1] gi|291076074|gb|EFE13438.1| conserved domain protein [Clostridium sp. M62/1] gi|295092473|emb|CBK78580.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Clostridium cf. saccharolyticum K10] gi|295115344|emb|CBL36191.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [butyrate-producing bacterium SM4/1] Length = 56 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+T+ C+ C C CPV EG+ I CIDCG C CP AI+ Sbjct: 1 MAYVITDTCVSCG--ACAGGCPVGAISEGDGKYEIDAAACIDCGACAGTCPTGAIEE 55 >gi|167622047|ref|YP_001672341.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352069|gb|ABZ74682.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 195 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 11/97 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY + + +H + CI CG C CP A Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDEGIVLHNKETCIGCGYCLYACPFGAP-------- 104 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + + N+ + + T P A ++K Sbjct: 105 -QFPQKNAFGSRGKMDKCTFCAGGP-APDFSEEERKL 139 >gi|85704202|ref|ZP_01035305.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. 217] gi|149201547|ref|ZP_01878521.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|85671522|gb|EAQ26380.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius sp. 217] gi|149144595|gb|EDM32624.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 198 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGIVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|312793989|ref|YP_004026912.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877607|ref|ZP_07737565.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795617|gb|EFR11988.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|312181129|gb|ADQ41299.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 57 Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ +ECI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCG--ACESECPVQCISAGDGKYVINEEECISCGACANVCPVDAPKP 55 >gi|225028182|ref|ZP_03717374.1| hypothetical protein EUBHAL_02454 [Eubacterium hallii DSM 3353] gi|224954494|gb|EEG35703.1| hypothetical protein EUBHAL_02454 [Eubacterium hallii DSM 3353] Length = 56 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV++++CI C C CP EG+ I D C+DCG C CP AI + Sbjct: 1 MAYVISDDCISCG--TCEGECPAGAISEGDGKYEIDADTCMDCGSCAGACPAGAISQE 56 >gi|313205341|ref|YP_004043998.1| ferredoxin [Paludibacter propionicigenes WB4] gi|312444657|gb|ADQ81013.1| ferredoxin [Paludibacter propionicigenes WB4] Length = 56 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++E+CI C C+ CPV+ EG + I D C DCG C CP +AI P Sbjct: 1 MAYVISEDCIACG--SCISECPVEAISEG-DIYVIDADVCTDCGTCADVCPSEAISP 54 >gi|159043060|ref|YP_001531854.1| formate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae DFL 12] gi|157910820|gb|ABV92253.1| formate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae DFL 12] Length = 198 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTDDAVVLHSKDTCIGCGYCFYACPFGAPQY 104 >gi|262402832|ref|ZP_06079393.1| ferredoxin [Vibrio sp. RC586] gi|262351614|gb|EEZ00747.1| ferredoxin [Vibrio sp. RC586] Length = 46 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WPN+T K ++ AAK DGV K Sbjct: 3 DQRIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKLNML 44 >gi|262165101|ref|ZP_06032838.1| ferredoxin [Vibrio mimicus VM223] gi|262172136|ref|ZP_06039814.1| ferredoxin [Vibrio mimicus MB-451] gi|261893212|gb|EEY39198.1| ferredoxin [Vibrio mimicus MB-451] gi|262024817|gb|EEY43485.1| ferredoxin [Vibrio mimicus VM223] Length = 46 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%) Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 +++++N+E A WPN+T K ++ AAK DGV K + Sbjct: 3 DQRIFIELNAELAEHWPNLTEVKPAMEDAAKWDGVPNKLDML 44 >gi|256371808|ref|YP_003109632.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008392|gb|ACU53959.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 512 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 ++ VT C C + CV CP Y+ + + + CI C C CP DAI + E Sbjct: 61 SFQVT-RCNQCTNPPCVAACPTGAMYQRPDGIVDFNKAICIGCKACMAACPYDAIFINPE 119 Query: 61 P 61 Sbjct: 120 D 120 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 23/61 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPVDA 54 CI CK C+ CP D + I+P+ +C C C CP +A Sbjct: 99 CIGCK--ACMAACPYDAIF-------INPEDHSAEKCNFCAHRLDIGLEPACVVVCPTEA 149 Query: 55 I 55 I Sbjct: 150 I 150 >gi|164686811|ref|ZP_02210839.1| hypothetical protein CLOBAR_00407 [Clostridium bartlettii DSM 16795] gi|164604201|gb|EDQ97666.1| hypothetical protein CLOBAR_00407 [Clostridium bartlettii DSM 16795] Length = 646 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +TE CI C C VCPVDC E + I + C CG C CPVDAI Sbjct: 220 TITEKCIGCG--ICQRVCPVDCIAGEKKEQRRIDYNRCTHCGRCLSACPVDAI 270 Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 ++CI CG+C+ CPVD I + + + + N Sbjct: 223 EKCIGCGICQRVCPVDCIAGEKKE--QRRIDYNR 254 >gi|149915678|ref|ZP_01904204.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. AzwK-3b] gi|149810570|gb|EDM70413.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. AzwK-3b] Length = 197 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|90418456|ref|ZP_01226368.1| formate dehydrogenase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] gi|90338128|gb|EAS51779.1| formate dehydrogenase, iron-sulfur subunit [Aurantimonas manganoxydans SI85-9A1] Length = 198 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|119990|sp|P00195|FER_CLOPA RecName: Full=Ferredoxin gi|144806|gb|AAA83524.1| ferredoxin [Clostridium pasteurianum] gi|208373|gb|AAA73179.1| ferredoxin [synthetic construct] Length = 56 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + ++C+ C C CPV+ +G++ I D CIDCG C CPV A + Sbjct: 1 MAYKIADSCVSCG--ACASECPVNAISQGDSIFVIDADTCIDCGNCANVCPVGAPVQE 56 >gi|113972048|ref|YP_735841.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|114049278|ref|YP_739828.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|117922349|ref|YP_871541.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|113886732|gb|ABI40784.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] gi|113890720|gb|ABI44771.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] gi|117614681|gb|ABK50135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 198 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|310779216|ref|YP_003967549.1| hydrogenase large subunit domain protein [Ilyobacter polytropus DSM 2926] gi|309748539|gb|ADO83201.1| hydrogenase large subunit domain protein [Ilyobacter polytropus DSM 2926] Length = 480 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y T+ C C +C VCP D + I P++CI CG+C C AI P Sbjct: 119 YYATDLCRNCIAHNCTNVCPRDAIVFDDGRAKIIPEKCIGCGLCAKSCDYYAIVKLERP 177 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 15/72 (20%) Query: 4 VVTENCILCK--------------HTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEP 48 ++ E CI C C C ++ + EN A I+ D+C+ CG C Sbjct: 151 IIPEKCIGCGLCAKSCDYYAIVKLERPCERACTLNAITKDENGAADINKDKCVACGACHV 210 Query: 49 ECPVDAIKPDTE 60 CP AI+ T+ Sbjct: 211 ACPFGAIESPTQ 222 >gi|260437855|ref|ZP_05791671.1| conserved domain protein [Butyrivibrio crossotus DSM 2876] gi|292809880|gb|EFF69085.1| conserved domain protein [Butyrivibrio crossotus DSM 2876] Length = 56 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++C+ C C CP G++ I D C+ CG CE CPV AI Sbjct: 1 MAYVISDSCVSCG--SCAGGCPAGAISLGDSHYEIDADTCLSCGACESACPVGAI 53 >gi|288957573|ref|YP_003447914.1| formate dehydrogenase iron-sulfur subunit [Azospirillum sp. B510] gi|288909881|dbj|BAI71370.1| formate dehydrogenase iron-sulfur subunit [Azospirillum sp. B510] Length = 225 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCPVDCFY+ + +H D CI CG C CP A + Sbjct: 50 TISVACMHCSDAPCKAVCPVDCFYQTAEGVVLHNKDLCIGCGYCFYACPFGAPQY 104 >gi|51894235|ref|YP_076926.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51857924|dbj|BAD42082.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 291 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C CV CP D G+ L ++ D CI CG CE CP D I D Sbjct: 91 SCMHCTDAGCVTACPTDALQYGDYGLVTLNQDACIGCGYCEAACPFDCIHVD 142 >gi|296137382|ref|YP_003644624.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|294341676|emb|CAZ90095.1| formate dehydrogenase iron-sulfur subunit [Thiomonas sp. 3As] gi|295797504|gb|ADG32294.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 210 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCPV CFY + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVSCFYRTPEGVVLHDKDVCIGCGYCSYACPFGAPQFPANGEF 110 Query: 64 ELWLKIN 70 L K++ Sbjct: 111 GLRGKMD 117 >gi|126739787|ref|ZP_01755478.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. SK209-2-6] gi|126719019|gb|EBA15730.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. SK209-2-6] Length = 197 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|256004045|ref|ZP_05429030.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 2360] gi|281419118|ref|ZP_06250135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum JW20] gi|255991968|gb|EEU02065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 2360] gi|281407267|gb|EFB37528.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum JW20] gi|316941711|gb|ADU75745.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium thermocellum DSM 1313] Length = 56 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T+ CI C C CPV C G++ I D CI+CG C CPVDA + Sbjct: 1 MAYFITDACISCG--ACESECPVSCISPGDSVYVIDADACIECGACANVCPVDAPQQ 55 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 13/28 (46%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D CI CG CE ECPV I P Sbjct: 1 MAYFITDACISCGACESECPVSCISPGD 28 >gi|260434033|ref|ZP_05788004.1| formate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417861|gb|EEX11120.1| formate dehydrogenase iron-sulfur subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 197 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|253581030|ref|ZP_04858291.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847693|gb|EES75662.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 57 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+++ C+ C C CP + +G+ I D C+DCG C CP +AI P Sbjct: 1 MAYVISDECVSCG--TCESECPAEAISQGDEHYVIDADACLDCGTCADACPTEAIHP 55 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + DEC+ CG CE ECP +AI E Sbjct: 1 MAYVISDECVSCGTCESECPAEAISQGDEH 30 >gi|239625212|ref|ZP_04668243.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519442|gb|EEQ59308.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 507 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VVT+ C C CVEVCP D I D CI CG C C +AI P Sbjct: 116 VVTDGCQGCLAHPCVEVCPKDAVSIDRSNGRSHIDQDRCIRCGRCADVCSYNAIIIQERP 175 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 +++ + CI C C C +DC + EN A I D+C+ CG+C Sbjct: 147 SHIDQDRCIRCGRCADVCSYNAIIIQERPCAAACGMDCIHSDENGKADIDYDKCVSCGMC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|78222251|ref|YP_383998.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] gi|78193506|gb|ABB31273.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] Length = 74 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V++++C C CV+ CPV+ + I D CIDCG C CP AI Sbjct: 20 AHVISDDCTNCG--SCVDSCPVNAIAPAGDKHKIDGDTCIDCGACVDTCPTSAI 71 >gi|302871132|ref|YP_003839768.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor obsidiansis OB47] gi|302573991|gb|ADL41782.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldicellulosiruptor obsidiansis OB47] Length = 57 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T++CI C C CPV C G+ I+ ++CI CG C CPVDA KP Sbjct: 1 MAYYITDDCISCG--ACESECPVQCISPGDGKYVINEEQCISCGACANVCPVDAPKP 55 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D+CI CG CE ECPV I P Sbjct: 1 MAYYITDDCISCGACESECPVQCISPGD 28 >gi|24375987|ref|NP_720030.1| formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] gi|24350986|gb|AAN57474.1|AE015883_5 formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] Length = 198 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|120600656|ref|YP_965230.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146291443|ref|YP_001181867.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120560749|gb|ABM26676.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145563133|gb|ABP74068.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] gi|319428326|gb|ADV56400.1| formate dehydrogenase, FeS subunit, FdhB [Shewanella putrefaciens 200] Length = 198 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTDDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|253581620|ref|ZP_04858845.1| hydrogenase [Fusobacterium varium ATCC 27725] gi|251836690|gb|EES65225.1| hydrogenase [Fusobacterium varium ATCC 27725] Length = 644 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + + C CG C CPV AI Sbjct: 217 FRITEKCIGC--TACARVCPVKCISGKIKERHILDTSRCTHCGQCVAACPVGAIFEGD 272 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ + + D Sbjct: 250 TSRCTHCGQ--CVAACPVGAIFEGDHTMKLLKD 280 >gi|219852666|ref|YP_002467098.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219546925|gb|ACL17375.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 368 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VV + CI C C+ VCP E I D CI C C CP AI D E Sbjct: 188 PMVVRDLCIGC--QTCLPVCPQQAIGMDEGAALISKDRCIGCFECMTVCPERAIDVDWET 245 Query: 62 GLELWLKINSEYAT 75 + + + EYA Sbjct: 246 DIPTFTERMVEYAA 259 >gi|197302881|ref|ZP_03167933.1| hypothetical protein RUMLAC_01610 [Ruminococcus lactaris ATCC 29176] gi|197298118|gb|EDY32666.1| hypothetical protein RUMLAC_01610 [Ruminococcus lactaris ATCC 29176] Length = 56 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+++ C+ C C CPV EGE+ + D CIDCG CE CPV AI Sbjct: 1 MARVISDECVKCG--TCEAECPVSAISEGEDTYVVDADSCIDCGACEAACPVGAI 53 >gi|51246231|ref|YP_066115.1| hydrogenase [Desulfotalea psychrophila LSv54] gi|50877268|emb|CAG37108.1| related to hydrogenase [Desulfotalea psychrophila LSv54] Length = 483 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT C C C++ CP D + I + CI+CG C CP AI Sbjct: 113 YEVTNACQGCLAQACIQSCPKDAITMVQGKSHIDSNLCINCGKCLKVCPYHAI 165 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE-----------------NFLAIHPDECIDCG 44 +++ + CI C C++VCP + I D CI CG Sbjct: 143 SHIDSNLCINCG--KCLKVCPYHAIVQIPIPCEVACPIGAISKDVSGRQVIDYDLCIFCG 200 Query: 45 VCEPECPVDAI 55 C +CP A+ Sbjct: 201 KCMAQCPFAAV 211 >gi|317133605|ref|YP_004092919.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] gi|315471584|gb|ADU28188.1| hydrogenase large subunit domain protein [Ethanoligenens harbinense YUAN-3] Length = 482 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C CP ++ I P++C +CG C CP AI P Sbjct: 90 FSVTDACRGCIAHKCHAACPFGAISYEKHRAVIDPEKCRECGRCMKACPYHAIIERQRP 148 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 11/51 (21%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC--GVCEPECPVDAIKPD 58 + + C + CPV F D C C C CP AI + Sbjct: 75 VSVIDSAC-DECPVQRFSVT--------DACRGCIAHKCHAACPFGAISYE 116 >gi|289450529|ref|YP_003475312.1| ferredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185076|gb|ADC91501.1| ferredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 56 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +++ CI C C CP G+ I+P+ CIDCG CE CPV AI + Sbjct: 1 MAYKISDMCISCG--TCEMECPTSSISAGDTQYIINPETCIDCGACEGACPVGAISAE 56 >gi|260888301|ref|ZP_05899564.1| conserved domain protein [Selenomonas sputigena ATCC 35185] gi|330838372|ref|YP_004412952.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] gi|260861837|gb|EEX76337.1| conserved domain protein [Selenomonas sputigena ATCC 35185] gi|329746136|gb|AEB99492.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Selenomonas sputigena ATCC 35185] Length = 56 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y ++E CI C C CPV+ EGE+ I ++CI+CG C CPV AI Sbjct: 1 MAYKISEECISCG--SCAGTCPVEAISEGESQYVIDEEKCIECGACAEGCPVSAI 53 >gi|325972119|ref|YP_004248310.1| Fe-S cluster domain protein [Spirochaeta sp. Buddy] gi|324027357|gb|ADY14116.1| Fe-S cluster domain protein [Spirochaeta sp. Buddy] Length = 445 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD--AIKPDTE 60 Y+V C C T C++ CP + I D CI+CG C CP + AI+ D+ Sbjct: 11 YIVESACKGC--THCMKRCPTQAIRIAKGKARIDNDLCIECGQCMAVCPNNAIAIEQDSL 68 Query: 61 PGLELWL 67 LE + Sbjct: 69 SQLEAFT 75 >gi|254450340|ref|ZP_05063777.1| formate dehydrogenase Fe-S subunit [Octadecabacter antarcticus 238] gi|198264746|gb|EDY89016.1| formate dehydrogenase Fe-S subunit [Octadecabacter antarcticus 238] Length = 197 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPTDCFYQTADGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|90418569|ref|ZP_01226481.1| formate dehydrogenase, iron-sulfur binding subunit [Aurantimonas manganoxydans SI85-9A1] gi|90338241|gb|EAS51892.1| formate dehydrogenase, iron-sulfur binding subunit [Aurantimonas manganoxydans SI85-9A1] Length = 198 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 10/99 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C VCPVDCF+ E+ + +H D CI CG C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFFTTEDGVVLHSKDLCIGCGYCFYACPFGAP-------- 102 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 + ++ + + + T P A + KY K Sbjct: 103 -QYPRVGNFGSRGKMDKCTYCAGGPEADSSEAEYAKYGK 140 >gi|225574426|ref|ZP_03783036.1| hypothetical protein RUMHYD_02495 [Blautia hydrogenotrophica DSM 10507] gi|225038354|gb|EEG48600.1| hypothetical protein RUMHYD_02495 [Blautia hydrogenotrophica DSM 10507] Length = 57 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+T+ C+ C C CP + +GE+ I D C+DCG C CP +AI Sbjct: 1 MAYVITDECVSCG--TCEAECPSEAISQGEDKYVIDADACVDCGTCADACPTEAI 53 >gi|302343580|ref|YP_003808109.1| FAD dependent oxidoreductase [Desulfarculus baarsii DSM 2075] gi|301640193|gb|ADK85515.1| FAD dependent oxidoreductase [Desulfarculus baarsii DSM 2075] Length = 1011 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 4 VVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VV E C C CV CP+ F + + I P++C+ CG+C ECP AI+ Sbjct: 939 VVGEMCAACLV--CVRACPIGVPFINADGYSQIDPEKCLGCGICAAECPAKAIQLQGYDD 996 Query: 63 LELWLKINS 71 ++ + ++ Sbjct: 997 DQIMGQTDA 1005 >gi|237737513|ref|ZP_04567994.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium mortiferum ATCC 9817] gi|229419393|gb|EEO34440.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium mortiferum ATCC 9817] Length = 592 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 TYV+T+ C C T C VC V EG I P++C+ CG C C AI Sbjct: 537 TYVITDACRGC--TACTRVCAVKAI-EGNIKEKHFIDPEKCVRCGACISACRFGAI 589 >gi|257053166|ref|YP_003130999.1| NADH dehydrogenase (quinone) [Halorhabdus utahensis DSM 12940] gi|256691929|gb|ACV12266.1| NADH dehydrogenase (quinone) [Halorhabdus utahensis DSM 12940] Length = 634 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 2 TY-VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY ++ E+CI C CV+ CP+D E I P C+ CG C CPVD I+ Sbjct: 577 TYKIIAEDCIGC--QQCVDACPIDAISGEPGEVHEIDPAACVGCGQCVDPCPVDTIE 631 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 19 EVCPV-DCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPD 58 E CP DC I ++CI C C CP+DAI + Sbjct: 560 EECPAGDCELGSGEHAGTYKIIAEDCIGCQQCVDACPIDAISGE 603 >gi|291546307|emb|CBL19415.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus sp. SR1/5] Length = 340 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 24/59 (40%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+ CP I D+CI CG C+ CP DAI P Sbjct: 115 YEVSNMCRGCVAHPCLLTCPKGAISMVNGKSFIDQDKCIHCGRCKAVCPYDAIAHKERP 173 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ + CI C C VCP D E +I+ D+C+ CG Sbjct: 145 SFIDQDKCIHCG--RCKAVCPYDAIAHKERPCERACGVKAIESDEQGRASINQDKCVSCG 202 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 203 MCMVSCPFGAISD 215 >gi|149926436|ref|ZP_01914697.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] gi|149824799|gb|EDM84013.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Limnobacter sp. MED105] Length = 200 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCPV+CFY+ + + +H D CI CG C CP A + E Sbjct: 51 ISVACMHCSDAPCQAVCPVNCFYKTDEGVVLHDKDLCIGCGYCFYACPFGAPQFPQEGAF 110 Query: 64 ELWLKIN 70 K++ Sbjct: 111 GQRGKMD 117 >gi|323484489|ref|ZP_08089855.1| hypothetical protein HMPREF9474_01606 [Clostridium symbiosum WAL-14163] gi|323692550|ref|ZP_08106783.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] gi|323402267|gb|EGA94599.1| hypothetical protein HMPREF9474_01606 [Clostridium symbiosum WAL-14163] gi|323503416|gb|EGB19245.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] Length = 439 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 14/72 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE------------GENFLAIHPDECIDCGVCEPECP 51 V E CI C C +VCPV G + D C+ CGVC CP Sbjct: 290 VNMETCIGCG--KCAKVCPVLAIRMEEENPSGEGEKTGRRKAVVDKDICLGCGVCVRNCP 347 Query: 52 VDAIKPDTEPGL 63 V AI+ + P Sbjct: 348 VSAIRLEKRPVQ 359 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 P+ +++ + CI CG C CPV AI+ + E Sbjct: 277 PMQPVATTNYIPSVNMETCIGCGKCAKVCPVLAIRMEEE 315 >gi|257469186|ref|ZP_05633280.1| hydrogenase, Fe-only [Fusobacterium ulcerans ATCC 49185] gi|317063434|ref|ZP_07927919.1| hydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313689110|gb|EFS25945.1| hydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 644 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + +TE CI C T C VCPV C + + C CG C CPV AI Sbjct: 217 FRITEKCIGC--TACARVCPVKCISGKIKERHILDTSRCTHCGQCVAACPVGAIFEGD 272 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD 38 T C C CV CPV +EG++ + + D Sbjct: 250 TSRCTHCGQ--CVAACPVGAIFEGDHTMKLLKD 280 >gi|218283672|ref|ZP_03489633.1| hypothetical protein EUBIFOR_02227 [Eubacterium biforme DSM 3989] gi|218215661|gb|EEC89199.1| hypothetical protein EUBIFOR_02227 [Eubacterium biforme DSM 3989] Length = 505 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 24/58 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C EVCP D + I ++CI CG C CP AI P Sbjct: 116 FVTNACQGCLSHQCTEVCPKDAIHIVNGKSCIDQEKCIKCGRCMDACPYHAITKLERP 173 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----------------EGENFLAIHPDECIDCGVCEPE 49 E CI C C++ CP + + I D+C+ CG+C Sbjct: 150 EKCIKCG--RCMDACPYHAITKLERPCAASCGMDAIKSDADGKAEIDYDKCVSCGMCLVN 207 Query: 50 CPVDAI 55 CP AI Sbjct: 208 CPFGAI 213 >gi|150016647|ref|YP_001308901.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] gi|149903112|gb|ABR33945.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052] Length = 644 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I + C CG C CPVDAI Sbjct: 217 TITKKCIGCG--ACKRACPVDCINGELKKKHEIDYNRCTHCGACVSACPVDAI 267 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 +CI CG C+ CPVD I + + E + N Sbjct: 221 KCIGCGACKRACPVDCINGELKKKHE--IDYNR 251 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL 33 C C CV CPVD G+N + Sbjct: 252 CTHCG--ACVSACPVDAISAGDNTM 274 >gi|145591183|ref|YP_001153185.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282951|gb|ABP50533.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 284 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 NC+ C C CPV GE + I+ DECI CG CE CP D K Sbjct: 94 NCLHCVAAPCARACPVGAIKVTGEGAVVINRDECIGCGYCETACPYDVPK 143 Score = 37.4 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 14/56 (25%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVD 53 + CI C + C CP D G + +C C C CP + Sbjct: 125 DECIGCGY--CETACPYDVPKRGSDGRYY---KCTFCVDRIQNGKLPACVEVCPTN 175 >gi|94266820|ref|ZP_01290483.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93452521|gb|EAT03113.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 345 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 11/100 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP--VDAIKPDTEP 61 +T +CI C CV VCP + E I ++CI CG CE CP VDA++ + Sbjct: 104 FITADCIKCG--KCVHVCPTEAISEDNR---IAREKCIGCGNCEAICPPKVDAVRYEHNE 158 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSA---AKMDGVKQ 98 + + A NI A + V Sbjct: 159 KALDKI-LPQCLAAGAENIELHAAVPGDARILEEWRAVSD 197 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 23 VDCFYEGENFL---AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 V G++ + I D CI CG C CP +AI D E + Sbjct: 90 VSVGMPGDHHVRKAFITAD-CIKCGKCVHVCPTEAISEDNRIAREKCI 136 >gi|258649091|ref|ZP_05736560.1| conserved domain protein [Prevotella tannerae ATCC 51259] gi|260850732|gb|EEX70601.1| conserved domain protein [Prevotella tannerae ATCC 51259] Length = 56 Score = 65.9 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++C+ C C+ CP + EGE +I+PD C+DCG C CP AI P Sbjct: 1 MAYVISDDCVACG--TCIGECPTESISEGE-KYSINPDSCVDCGACADACPTGAIAP 54 >gi|108804450|ref|YP_644387.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765693|gb|ABG04575.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Rubrobacter xylanophilus DSM 9941] Length = 531 Score = 65.9 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ CVE CPV Y E+ + + D CI C C CP DA+ D E Sbjct: 58 CNHCEDAPCVEACPVTALYVREDGIVDFNWDRCIGCKACTQACPYDALYIDPE 110 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 25/84 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPV 52 + CI CK C + CP D L I P+ +C C C CP Sbjct: 88 DRCIGCK--ACTQACPYDA-------LYIDPESHTAAKCNYCAHRVDMGLEPACVNVCPE 138 Query: 53 DAIKPDTEPGLELWLKINSEYATQ 76 AI +I+ A + Sbjct: 139 QAIISGDMDDPAS--EISRLLARE 160 >gi|331269074|ref|YP_004395566.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925] gi|329125624|gb|AEB75569.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925] Length = 441 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 16/109 (14%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + +T+ CI C T C +VCPV C + I ++C+ CG C CP+ A+ P Sbjct: 25 FQITDKCIGC--TKCAKVCPVSCISGKIKEKHVIDTEKCVKCGQCISACPMGAL-----P 77 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 + ++ NI KK L A ++ +YF PG Sbjct: 78 TI--------DFTLNLKNILNKKNKLIIAQVAPSIRATLGEYFGLEPGT 118 >gi|95930556|ref|ZP_01313291.1| thiamine pyrophosphate enzyme-like TPP-binding [Desulfuromonas acetoxidans DSM 684] gi|95133391|gb|EAT15055.1| thiamine pyrophosphate enzyme-like TPP-binding [Desulfuromonas acetoxidans DSM 684] Length = 615 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 5 VTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T +CI C CVE CP E + D CI CG C P CPV AIK Sbjct: 552 ITSDCIGC--RRCVEAFECPALSMDEATTMAVLDQDRCIGCGTCIPVCPVHAIK 603 >gi|114706723|ref|ZP_01439623.1| formate dehydrogenase, iron-sulfur subunit, putative [Fulvimarina pelagi HTCC2506] gi|114537671|gb|EAU40795.1| formate dehydrogenase, iron-sulfur subunit, putative [Fulvimarina pelagi HTCC2506] Length = 195 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 48 ISVACMHCSDAPCMAVCPVDCFYQTADGVVLHSKDLCIGCGYCFYACPFGAPQYPE 103 >gi|126734222|ref|ZP_01749969.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126717088|gb|EBA13952.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 197 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCMAVCPVDCFYQTSDGVVLHSKDLCIGCGYCFYACPFGAPQF 104 >gi|297587236|ref|ZP_06945881.1| NADH dehydrogenase (quinone) [Finegoldia magna ATCC 53516] gi|297575217|gb|EFH93936.1| NADH dehydrogenase (quinone) [Finegoldia magna ATCC 53516] Length = 626 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C E + I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCIEGEVKKQHVIDKSQCIKCGNCETVCPVHAV 623 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D+CI C C CPV I+ + + Sbjct: 576 DKCIGCTKCAKNCPVSCIEGEVK 598 >gi|153808350|ref|ZP_01961018.1| hypothetical protein BACCAC_02644 [Bacteroides caccae ATCC 43185] gi|160885009|ref|ZP_02066012.1| hypothetical protein BACOVA_03006 [Bacteroides ovatus ATCC 8483] gi|237712761|ref|ZP_04543242.1| ferredoxin [Bacteroides sp. D1] gi|237718010|ref|ZP_04548491.1| ferredoxin [Bacteroides sp. 2_2_4] gi|253572210|ref|ZP_04849614.1| ferredoxin [Bacteroides sp. 1_1_6] gi|255693219|ref|ZP_05416894.1| conserved domain protein [Bacteroides finegoldii DSM 17565] gi|260174361|ref|ZP_05760773.1| ferredoxin [Bacteroides sp. D2] gi|262409750|ref|ZP_06086288.1| ferredoxin [Bacteroides sp. 2_1_22] gi|294645353|ref|ZP_06723064.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|298387976|ref|ZP_06997524.1| hypothetical protein HMPREF9007_04780 [Bacteroides sp. 1_1_14] gi|298483140|ref|ZP_07001320.1| hypothetical protein HMPREF0106_03607 [Bacteroides sp. D22] gi|299147705|ref|ZP_07040768.1| conserved domain protein [Bacteroides sp. 3_1_23] gi|315922629|ref|ZP_07918869.1| ferredoxin [Bacteroides sp. D2] gi|149129253|gb|EDM20469.1| hypothetical protein BACCAC_02644 [Bacteroides caccae ATCC 43185] gi|156109359|gb|EDO11104.1| hypothetical protein BACOVA_03006 [Bacteroides ovatus ATCC 8483] gi|229447173|gb|EEO52964.1| ferredoxin [Bacteroides sp. D1] gi|229452651|gb|EEO58442.1| ferredoxin [Bacteroides sp. 2_2_4] gi|251838390|gb|EES66477.1| ferredoxin [Bacteroides sp. 1_1_6] gi|260621028|gb|EEX43899.1| conserved domain protein [Bacteroides finegoldii DSM 17565] gi|262352403|gb|EEZ01505.1| ferredoxin [Bacteroides sp. 2_1_22] gi|292639291|gb|EFF57598.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|295084619|emb|CBK66142.1| 4Fe-4S binding domain. [Bacteroides xylanisolvens XB1A] gi|298259242|gb|EFI02118.1| hypothetical protein HMPREF9007_04780 [Bacteroides sp. 1_1_14] gi|298270657|gb|EFI12238.1| hypothetical protein HMPREF0106_03607 [Bacteroides sp. D22] gi|298513888|gb|EFI37774.1| conserved domain protein [Bacteroides sp. 3_1_23] gi|313696504|gb|EFS33339.1| ferredoxin [Bacteroides sp. D2] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV+ EG + +I+PD C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVEAISEG-DIYSINPDVCTDCGTCADVCPSEAIHP 54 >gi|212637704|ref|YP_002314229.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212559188|gb|ACJ31642.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 195 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|118580644|ref|YP_901894.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503354|gb|ABK99836.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pelobacter propionicus DSM 2379] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + ++CI C C + CPV+ E + I D CIDCG C CPV+AI Sbjct: 1 MAHSINDDCINCG--ACDDSCPVNAISEQDGKRVIDADTCIDCGACVDTCPVNAI 53 >gi|86140241|ref|ZP_01058802.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. MED193] gi|85823044|gb|EAQ43258.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseobacter sp. MED193] Length = 197 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 C+ C C+ VCPVDCFY+ + + +H D CI CG C CP A + Sbjct: 54 ACMHCSDAPCMAVCPVDCFYQTADGVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|332829008|gb|EGK01676.1| hypothetical protein HMPREF9455_02031 [Dysgonomonas gadei ATCC BAA-286] Length = 55 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG + I PD C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACG--TCIDECPVNAISEG-DIYKIDPDTCTDCGTCADACPTEAIHP 54 >gi|291545260|emb|CBL18369.1| 4Fe-4S binding domain [Ruminococcus sp. 18P13] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++CI+C C CPV G++ I D CI+CG C CPV A Sbjct: 1 MAYVISDDCIMCG--ACESECPVSAISAGDSKYVIDADTCIECGACAGVCPVSAP 53 >gi|291550262|emb|CBL26524.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus torques L2-14] Length = 434 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP I D+CI CG C+ CP DAI P Sbjct: 48 YEVSNVCKGCLAHPCQEVCPRGAISMVNGKSFIDQDKCIKCGKCKSVCPYDAIAKKERP 106 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ + CI C C VCP D + E I D+C+ CG Sbjct: 78 SFIDQDKCIKCG--KCKSVCPYDAIAKKERPCKKACGVNAITSDKLGRAYIDADKCVSCG 135 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 136 MCMVSCPFGAISD 148 >gi|222054905|ref|YP_002537267.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] gi|221564194|gb|ACM20166.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] Length = 442 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ CI C C CPVD E I+PD+CI C C CP AI+ Sbjct: 16 ACVLEGKCIACGAR-CQSSCPVDAIEMNEAGEPVINPDKCIGCVKCVKVCPAQAIEMFFT 74 Query: 61 PGLEL 65 P + Sbjct: 75 PEEQK 79 >gi|332654077|ref|ZP_08419821.1| conserved domain protein [Ruminococcaceae bacterium D16] gi|332517163|gb|EGJ46768.1| conserved domain protein [Ruminococcaceae bacterium D16] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+++ CI C C + CPV +G + I+ C+DCG C CP+ AI Sbjct: 1 MAYVISDACISCG--SCADACPVGAIAQGADHYEINAGACLDCGSCADSCPMSAI 53 >gi|325679199|ref|ZP_08158790.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324109128|gb|EGC03353.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 478 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C +VCP N + I +C++CG C CP AI P Sbjct: 94 YEVTDSCRGCLAHRCEDVCPRGAISFDHNHVAHIDKSKCVECGRCSKVCPYSAITNRVRP 153 Query: 62 GL 63 Sbjct: 154 CQ 155 >gi|313904957|ref|ZP_07838328.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] gi|313470214|gb|EFR65545.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V++++C+ C C CPV +G+ I D C+DCG CE CP AI Sbjct: 1 MARVISDDCVSCG--TCEGECPVGAISQGDGKFVIDADSCVDCGACEAACPTGAI 53 >gi|255014270|ref|ZP_05286396.1| ferredoxin [Bacteroides sp. 2_1_7] gi|256841512|ref|ZP_05547019.1| ferredoxin [Parabacteroides sp. D13] gi|262383318|ref|ZP_06076454.1| ferredoxin [Bacteroides sp. 2_1_33B] gi|298376261|ref|ZP_06986217.1| hypothetical protein HMPREF0104_02443 [Bacteroides sp. 3_1_19] gi|301309369|ref|ZP_07215311.1| conserved domain protein [Bacteroides sp. 20_3] gi|256737355|gb|EEU50682.1| ferredoxin [Parabacteroides sp. D13] gi|262294216|gb|EEY82148.1| ferredoxin [Bacteroides sp. 2_1_33B] gi|298267298|gb|EFI08955.1| hypothetical protein HMPREF0104_02443 [Bacteroides sp. 3_1_19] gi|300832458|gb|EFK63086.1| conserved domain protein [Bacteroides sp. 20_3] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I+P+ C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DKYSINPEMCTDCGTCADACPTEAIHP 54 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + D+CI CG C ECPV AI + Sbjct: 1 MAYVISDDCIACGTCIDECPVGAISEGDK 29 >gi|198276095|ref|ZP_03208626.1| hypothetical protein BACPLE_02282 [Bacteroides plebeius DSM 17135] gi|224026834|ref|ZP_03645200.1| hypothetical protein BACCOPRO_03591 [Bacteroides coprophilus DSM 18228] gi|198270907|gb|EDY95177.1| hypothetical protein BACPLE_02282 [Bacteroides plebeius DSM 17135] gi|224020070|gb|EEF78068.1| hypothetical protein BACCOPRO_03591 [Bacteroides coprophilus DSM 18228] Length = 55 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV EG + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DKYSINPDACTECGTCADVCPSEAIH 53 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + D+CI CG C ECPV AI + Sbjct: 1 MAYVISDDCIACGTCIDECPVGAISEGDK 29 >gi|227485286|ref|ZP_03915602.1| hydrogenase large subunit domain protein [Anaerococcus lactolyticus ATCC 51172] gi|227236746|gb|EEI86761.1| hydrogenase large subunit domain protein [Anaerococcus lactolyticus ATCC 51172] Length = 508 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 26/61 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VT+ C C CV VCP + I D+CI CG C CP +AI P Sbjct: 114 TVTDQCHACIGHPCVNVCPKNAVSYSSKGAKIDQDKCIKCGKCVEACPYNAINHQKRPCA 173 Query: 64 E 64 E Sbjct: 174 E 174 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 19/68 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 + CI C CVE CP + + +I ++C+ CG C Sbjct: 148 DKCIKCG--KCVEACPYNAINHQKRPCAESCGVKAIKSDELGRASIDENKCVACGRCIIT 205 Query: 50 CPVDAIKP 57 CP AI Sbjct: 206 CPFGAISD 213 >gi|210620552|ref|ZP_03292100.1| hypothetical protein CLOHIR_00043 [Clostridium hiranonis DSM 13275] gi|210155266|gb|EEA86272.1| hypothetical protein CLOHIR_00043 [Clostridium hiranonis DSM 13275] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ C+ C C CPV EG++ I D C++CG C CPV A + + Sbjct: 1 MAYKITDACVSCG--ACAAECPVGAISEGDSIYVIDADACVECGACAEACPVGAPQAE 56 >gi|189424812|ref|YP_001951989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189421071|gb|ACD95469.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 55 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + +T++C C C + CPV+ E + I D CIDCG C CPV+AI Sbjct: 1 MAHTITDDCTNC--AACEDSCPVNAISEQGSKRVIDADTCIDCGACVDTCPVNAIH 54 >gi|291563047|emb|CBL41863.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 513 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP D I PD+CI CG C C AI P Sbjct: 123 VTDGCQGCLAHPCVEVCPKDAVSLDRTNGRSRIDPDKCIKCGQCANVCAYHAIIIQERP 181 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 15/64 (23%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 + CI C C C +D + EN A I+ D+C+ CG C CP Sbjct: 158 DKCIKCGQCANVCAYHAIIIQERPCAAACGMDAIHSDENGKADINYDKCVSCGQCLVNCP 217 Query: 52 VDAI 55 AI Sbjct: 218 FGAI 221 >gi|160880195|ref|YP_001559163.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg] gi|160428861|gb|ABX42424.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg] Length = 644 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 + +NCI C C +VCPVDC + I C CG C CPV+AI Sbjct: 219 TIMDNCIGCD--KCTKVCPVDCIVGDFKEQHYIDYTRCTHCGACLSTCPVNAI 269 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 D CI C C CPVD I D + + ++ Sbjct: 222 DNCIGCDKCTKVCPVDCIVGDFKE--QHYID 250 >gi|238917868|ref|YP_002931385.1| hypothetical protein EUBELI_01949 [Eubacterium eligens ATCC 27750] gi|238873228|gb|ACR72938.1| Hypothetical protein EUBELI_01949 [Eubacterium eligens ATCC 27750] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++CI C C CPV+ EG I+ D C+DCG C CPV A P Sbjct: 1 MAYVINDDCISCG--ACAAGCPVEAISEGAAHYEINADVCVDCGACAGTCPVGAPNP 55 >gi|306821643|ref|ZP_07455241.1| NADH dehydrogenase (quinone) [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550388|gb|EFM38381.1| NADH dehydrogenase (quinone) [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 527 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +TE CI C T C VCPV C + I +CI CG C CPV AI+ Sbjct: 473 YYITEKCIGC--TKCANVCPVKCIDGSIKKRHVITAQQCIKCGQCYEACPVHAIE 525 >gi|18311429|ref|NP_563363.1| ferredoxin [Clostridium perfringens str. 13] gi|110800097|ref|YP_697135.1| putative ferredoxin [Clostridium perfringens ATCC 13124] gi|168206841|ref|ZP_02632846.1| putative ferredoxin [Clostridium perfringens E str. JGS1987] gi|168211231|ref|ZP_02636856.1| putative ferredoxin [Clostridium perfringens B str. ATCC 3626] gi|168214736|ref|ZP_02640361.1| putative ferredoxin [Clostridium perfringens CPE str. F4969] gi|168217940|ref|ZP_02643565.1| putative ferredoxin [Clostridium perfringens NCTC 8239] gi|169344118|ref|ZP_02865101.1| putative ferredoxin [Clostridium perfringens C str. JGS1495] gi|182626000|ref|ZP_02953763.1| putative ferredoxin [Clostridium perfringens D str. JGS1721] gi|20141076|sp|P22846|FER_CLOPE RecName: Full=Ferredoxin gi|18146113|dbj|BAB82153.1| ferredoxin [Clostridium perfringens str. 13] gi|110674744|gb|ABG83731.1| putative ferredoxin [Clostridium perfringens ATCC 13124] gi|169297729|gb|EDS79828.1| putative ferredoxin [Clostridium perfringens C str. JGS1495] gi|170661735|gb|EDT14418.1| putative ferredoxin [Clostridium perfringens E str. JGS1987] gi|170710749|gb|EDT22931.1| putative ferredoxin [Clostridium perfringens B str. ATCC 3626] gi|170713813|gb|EDT25995.1| putative ferredoxin [Clostridium perfringens CPE str. F4969] gi|177908707|gb|EDT71218.1| putative ferredoxin [Clostridium perfringens D str. JGS1721] gi|182380036|gb|EDT77515.1| putative ferredoxin [Clostridium perfringens NCTC 8239] Length = 56 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + + C+ C C CPVD +G+ I D CIDCG C CPV A + Sbjct: 1 MAYKILDTCVSCG--ACAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGAPVQE 56 >gi|302390415|ref|YP_003826236.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosediminibacter oceani DSM 16646] gi|302201043|gb|ADL08613.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosediminibacter oceani DSM 16646] Length = 372 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V +NC C C++ CP + + I P++C+ CG C C IKP + Sbjct: 190 FVDKNCRKCL--SCIKNCPEEAISLVDGAAYIDPEKCVGCGECISMCYFGVIKPQWKTDN 247 Query: 64 ELWLKINSEYA 74 +++ +E+A Sbjct: 248 REFIERMTEHA 258 >gi|53711888|ref|YP_097880.1| ferredoxin [Bacteroides fragilis YCH46] gi|52214753|dbj|BAD47346.1| ferredoxin [Bacteroides fragilis YCH46] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++E+CI C C++ CPV EG + +I P++C DCG C CP +AI P Sbjct: 1 MAYVISEDCIACG--TCIDECPVGAISEG-DIYSIDPEQCTDCGTCADVCPSEAIHP 54 >gi|302339761|ref|YP_003804967.1| hydrogenase large subunit domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636946|gb|ADK82373.1| hydrogenase large subunit domain protein [Spirochaeta smaragdinae DSM 11293] Length = 504 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 25/61 (40%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +VT+ C C C VCP + E I D+CI C C CP AI P Sbjct: 126 IVTDKCQSCMAHPCSIVCPRNAITFPEGKAHIDQDKCIKCMKCVQVCPYSAITRMVRPCA 185 Query: 64 E 64 E Sbjct: 186 E 186 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 19/82 (23%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-----------------EGENFLAIHPDECIDCG 44 ++ + CI C CV+VCP + E F I C+ CG Sbjct: 155 AHIDQDKCIKC--MKCVQVCPYSAITRMVRPCAEACGVGAIDSDEEGFARIDQKVCVSCG 212 Query: 45 VCEPECPVDAIKPDTEPGLELW 66 +C CP AI +E + Sbjct: 213 LCTVSCPFGAISDKSEIVQVTF 234 >gi|262066053|ref|ZP_06025665.1| putative 4Fe-4S binding domain protein [Fusobacterium periodonticum ATCC 33693] gi|291380303|gb|EFE87821.1| putative 4Fe-4S binding domain protein [Fusobacterium periodonticum ATCC 33693] Length = 206 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C CVEVCP +C I + C+ CG C CPV A++ Sbjct: 153 YFITDKCIGCN--KCVEVCPQNCIITDSVPYVIEQNHCLHCGNCFTVCPVGAVE 204 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEP 61 D+CI C C CP + I D+ P Sbjct: 153 YFITDKCIGCNKCVEVCPQNCIITDSVP 180 >gi|269119251|ref|YP_003307428.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] gi|268613129|gb|ACZ07497.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] Length = 614 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 YV+ + CI C T C VCPV C EG+ I D+CI CG C +C AI Sbjct: 560 YVINDKCIGC--TACARVCPVSCI-EGKVKEKHVIEQDKCIKCGACYDKCKFSAI 611 Score = 40.1 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIK 56 I+ D+CI C C CPV I+ Sbjct: 559 KYVIN-DKCIGCTACARVCPVSCIE 582 >gi|163749866|ref|ZP_02157111.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] gi|161330380|gb|EDQ01359.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] Length = 196 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCP DCFY E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCQAVCPADCFYRTEDGIVLHNKDTCIGCGYCLYACPFGAPQF 106 >gi|331092302|ref|ZP_08341130.1| hypothetical protein HMPREF9477_01773 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401734|gb|EGG81313.1| hypothetical protein HMPREF9477_01773 [Lachnospiraceae bacterium 2_1_46FAA] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+++ C+ C C CPV +G + I D C+DCG C +CP AI + Sbjct: 1 MAHVISDECVSCG--ACEAECPVGAISQGADHYEISADACVDCGACAAQCPTGAISAE 56 >gi|291525181|emb|CBK90768.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale DSM 17629] Length = 507 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C+EVCP D I ++CI CG C C +AI P Sbjct: 117 VTDGCQGCLAHPCMEVCPKDAISLDRTTGKSVIDQEKCIKCGRCASVCSYNAIIVQERP 175 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 15/64 (23%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C + C +D EN A I D+C+ CG C CP Sbjct: 152 EKCIKCGRCASVCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCP 211 Query: 52 VDAI 55 AI Sbjct: 212 FGAI 215 >gi|292491700|ref|YP_003527139.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291580295|gb|ADE14752.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 195 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCPVDCFY ++ + +H D CI CG C CP A + Sbjct: 51 ISVACMHCTDAPCAAVCPVDCFYTTDDGIVLHDKDLCIGCGYCFYACPFGAPQY 104 >gi|212690928|ref|ZP_03299056.1| hypothetical protein BACDOR_00416 [Bacteroides dorei DSM 17855] gi|237712588|ref|ZP_04543069.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|237726898|ref|ZP_04557379.1| ferredoxin [Bacteroides sp. D4] gi|254882246|ref|ZP_05254956.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|265752267|ref|ZP_06088060.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|294776421|ref|ZP_06741899.1| ferredoxin [Bacteroides vulgatus PC510] gi|319643192|ref|ZP_07997820.1| ferredoxin [Bacteroides sp. 3_1_40A] gi|212666160|gb|EEB26732.1| hypothetical protein BACDOR_00416 [Bacteroides dorei DSM 17855] gi|229435424|gb|EEO45501.1| ferredoxin [Bacteroides dorei 5_1_36/D4] gi|229453909|gb|EEO59630.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|254835039|gb|EET15348.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|263237059|gb|EEZ22529.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|294449747|gb|EFG18269.1| ferredoxin [Bacteroides vulgatus PC510] gi|317385096|gb|EFV66047.1| ferredoxin [Bacteroides sp. 3_1_40A] Length = 55 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M YV++++CI C C++ CPV+ EG + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACG--TCIDECPVEAISEG-DKYSINPDLCTECGTCADACPSEAIH 53 Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + D+CI CG C ECPV+AI + Sbjct: 1 MAYVISDDCIACGTCIDECPVEAISEGDK 29 >gi|317056017|ref|YP_004104484.1| ferredoxin [Ruminococcus albus 7] gi|315448286|gb|ADU21850.1| ferredoxin [Ruminococcus albus 7] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++++CI C C CPV EG+ I C+DCG C CPV A + + Sbjct: 1 MAYKISDDCIGCG--ACAAECPVGAISEGDGKYVIDASACLDCGACAGTCPVGAPQAE 56 >gi|255009761|ref|ZP_05281887.1| ferredoxin [Bacteroides fragilis 3_1_12] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I P++C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DIYSIDPEQCTDCGTCADVCPSEAIHP 54 >gi|268680689|ref|YP_003305120.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618720|gb|ACZ13085.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 210 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 ++ C+ C C +VCPVDCFY E+ + +H ++CI CG C CP A + + Sbjct: 56 ISIACMHCSDAPCSQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGAPQFPKD 112 >gi|325300099|ref|YP_004260016.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324319652|gb|ADY37543.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] Length = 55 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DKYSINPDMCTECGTCADVCPSEAIHQ 54 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + D+CI CG C ECPV AI + Sbjct: 1 MAYVISDDCIACGTCIDECPVGAISEGDK 29 >gi|254491904|ref|ZP_05105083.1| 4Fe-4S binding domain protein [Methylophaga thiooxidans DMS010] gi|224463382|gb|EEF79652.1| 4Fe-4S binding domain protein [Methylophaga thiooxydans DMS010] Length = 194 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 10/97 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCPVDCFY ++ + +H D CI CG C CP A + E Sbjct: 51 ISVACMHCTDAPCQAVCPVDCFYTTDDGVVLHDKDICIGCGYCFYACPFGAPQYPQEG-- 108 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + A + T P KY Sbjct: 109 -------AFGARGKMDKCTFCAGGPEEDNSQEELDKY 138 >gi|160942972|ref|ZP_02090210.1| hypothetical protein FAEPRAM212_00449 [Faecalibacterium prausnitzii M21/2] gi|158445666|gb|EDP22669.1| hypothetical protein FAEPRAM212_00449 [Faecalibacterium prausnitzii M21/2] Length = 538 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 142 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQDKCIKCGRCVTVCPYNAIVKTERP 198 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDE----------CIDCGVCEPE 49 + CI C CV VCP + + E AIH DE C+ CG C Sbjct: 175 DKCIKCG--RCVTVCPYNAIVKTERPCAAACGMGAIHSDELGRAEIDYSKCVSCGQCLVN 232 Query: 50 CPVDAI 55 CP AI Sbjct: 233 CPFGAI 238 >gi|189345592|ref|YP_001942121.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] gi|189339739|gb|ACD89142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 517 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C CV++CPV+ + + + CI C C CP +A+ D + Sbjct: 51 YFTVLRCNHCAEPPCVDICPVEALQKRPDGIVDFDSRRCIGCKACAQACPYNALYIDPD 109 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 23/68 (33%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPVDA 54 CI CK C + CP + L I PD +C C C CP A Sbjct: 89 CIGCK--ACAQACPYNA-------LYIDPDTHTSAKCNYCAHRKEVGLQPACVAICPQQA 139 Query: 55 IKPDTEPG 62 I Sbjct: 140 IVSGDLDD 147 Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 7/19 (36%) Query: 32 FLAIHPDECIDCGVCEPEC 50 I +CI C C C Sbjct: 4 GFVIDARKCIGCHACTVAC 22 >gi|154494844|ref|ZP_02033849.1| hypothetical protein PARMER_03888 [Parabacteroides merdae ATCC 43184] gi|218262678|ref|ZP_03477036.1| hypothetical protein PRABACTJOHN_02715 [Parabacteroides johnsonii DSM 18315] gi|154085394|gb|EDN84439.1| hypothetical protein PARMER_03888 [Parabacteroides merdae ATCC 43184] gi|218223229|gb|EEC95879.1| hypothetical protein PRABACTJOHN_02715 [Parabacteroides johnsonii DSM 18315] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I P+ C DCG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DKYSIDPEMCTDCGTCADACPTEAIHP 54 >gi|172040506|ref|YP_001800220.1| dimethyl sulfoxide reductase chain B [Corynebacterium urealyticum DSM 7109] gi|171851810|emb|CAQ04786.1| dimethyl sulfoxide reductase chain B [Corynebacterium urealyticum DSM 7109] Length = 213 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 TY + +C C+ C +VCP ++GE+ + + PD+CI C CE CP A + + E Sbjct: 68 TYYTSISCNHCEDPICAKVCPTTAMHKGEDGIVTVDPDKCIGCRYCEWACPYSAPQFNPE 127 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 + ++ + A + + EKY Sbjct: 128 TKQMSKCDLCADLRAEGEEPACVTACPSRALDWGPIDELREKY 170 >gi|114049282|ref|YP_739832.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|117922353|ref|YP_871545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|113890724|gb|ABI44775.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] gi|117614685|gb|ABK50139.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 189 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTEDGIVLHNKDACIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|317478673|ref|ZP_07937828.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316905184|gb|EFV26983.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 56 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + I P+ C +CG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DIYHIDPETCTECGTCADVCPSEAIHP 54 >gi|118445132|ref|YP_879222.1| ferredoxin [Clostridium novyi NT] gi|253680812|ref|ZP_04861615.1| ferredoxin [Clostridium botulinum D str. 1873] gi|331270643|ref|YP_004397135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Clostridium botulinum BKT015925] gi|118135588|gb|ABK62632.1| ferredoxin [Clostridium novyi NT] gi|253562661|gb|EES92107.1| ferredoxin [Clostridium botulinum D str. 1873] gi|329127193|gb|AEB77138.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium botulinum BKT015925] Length = 57 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M + + ++C+ C C CPV +G++ I + CIDCG C CPV AI + Sbjct: 1 MAFKIGDSCVSCG--SCASECPVGAISQGDSQFEIDANSCIDCGNCANVCPVGAIAAEE 57 >gi|153002610|ref|YP_001368291.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160877331|ref|YP_001556647.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|217971437|ref|YP_002356188.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|304412793|ref|ZP_07394395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307457|ref|ZP_07587192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|151367228|gb|ABS10228.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160862853|gb|ABX51387.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|217496572|gb|ACK44765.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] gi|304348873|gb|EFM13289.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910245|gb|EFN40678.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|315269536|gb|ADT96389.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 189 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|313114957|ref|ZP_07800452.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622717|gb|EFQ06177.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 516 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSIIDQDKCIKCGRCVGVCPYNAIVKTERP 177 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDE----------CIDCGVCEPE 49 + CI C CV VCP + + E AIH DE C+ CG C Sbjct: 154 DKCIKCG--RCVGVCPYNAIVKTERPCAAACGMGAIHSDELGRAEIDYSKCVSCGQCLVN 211 Query: 50 CPVDAI 55 CP AI Sbjct: 212 CPFGAI 217 >gi|229829818|ref|ZP_04455887.1| hypothetical protein GCWU000342_01916 [Shuttleworthia satelles DSM 14600] gi|229791807|gb|EEP27921.1| hypothetical protein GCWU000342_01916 [Shuttleworthia satelles DSM 14600] Length = 219 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C C VCP +C I + C+ CG C CPV A++ Sbjct: 166 YFITDACIGCG--SCAAVCPQNCIVTDSIPYIIEQEHCLHCGNCLTACPVGAVE 217 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEP 61 D CI CG C CP + I D+ P Sbjct: 166 YFITDACIGCGSCAAVCPQNCIVTDSIP 193 >gi|149194120|ref|ZP_01871218.1| formate dehydrogenase, iron-sulfur chain [Caminibacter mediatlanticus TB-2] gi|149136073|gb|EDM24551.1| formate dehydrogenase, iron-sulfur chain [Caminibacter mediatlanticus TB-2] Length = 197 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 + V+ C+ C C +VCPVDCFY E+ + +H D+CI CG C CP A + + Sbjct: 53 FSVSVACMHCTDAPCEQVCPVDCFYIREDGIVLHDKDKCIGCGYCLYACPFGAPQFPKDG 112 Query: 62 GL 63 Sbjct: 113 AF 114 >gi|114320443|ref|YP_742126.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226837|gb|ABI56636.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 196 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPVDCFY ++ + +H D CI CG C CP A + Sbjct: 51 VSVACMHCTDAPCAAVCPVDCFYTTDDGVVLHDKDLCIGCGYCFYACPFGAPQF 104 >gi|327401132|ref|YP_004341971.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316640|gb|AEA47256.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 184 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + C+ C C++VCP+D Y+ + + ++ D+CI CG C CP A + + Sbjct: 51 IPMPCMHCSDPACLKVCPMDAIYKRPDGIVLVNKDKCIGCGYCSYACPFGAPQFE 105 >gi|120600660|ref|YP_965234.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146291439|ref|YP_001181863.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120560753|gb|ABM26680.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145563129|gb|ABP74064.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] gi|319428330|gb|ADV56404.1| formate dehydrogenase, FeS subunit, FdhB [Shewanella putrefaciens 200] Length = 189 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|255654255|ref|ZP_05399664.1| ferredoxin [Clostridium difficile QCD-23m63] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYKITDACISCG--ACEAECPVSCISAGDDAYVIDASSCIDCGSCAGACPVDAPQPE 56 >gi|255279826|ref|ZP_05344381.1| Fe-hydrogenase large subunit family protein [Bryantella formatexigens DSM 14469] gi|255269599|gb|EET62804.1| Fe-hydrogenase large subunit family protein [Bryantella formatexigens DSM 14469] Length = 507 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP I D+CI CG C C AI P Sbjct: 116 FVTDGCRGCLAHPCVEVCPKGAVTLERTNGRSVIDQDKCIKCGRCADVCSYHAIIVQERP 175 >gi|15679814|ref|NP_276932.1| hypothetical protein MTH1826 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622960|gb|AAB86292.1| unknown (contains ferredoxin domain) [Methanothermobacter thermautotrophicus str. Delta H] Length = 367 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+T +C LC CVE CPV+ E+ + I DECI C C CP + + E + Sbjct: 189 VITGDCNLCGV--CVEDCPVEAITLTEDGVKIEYDECIACMNCMDSCPNEVYDLNWEDDV 246 Query: 64 ELWLKINSEYA 74 +++ EY+ Sbjct: 247 PAFIERMMEYS 257 >gi|220927620|ref|YP_002504529.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium cellulolyticum H10] gi|219997948|gb|ACL74549.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium cellulolyticum H10] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + + CI C C CPV C G++ I D CIDCG C CPVDA + Sbjct: 1 MAYSINDACISCG--ACESECPVSCITAGDSIYVIDEDTCIDCGACANVCPVDAPQQ 55 >gi|332883619|gb|EGK03900.1| hypothetical protein HMPREF9456_01441 [Dysgonomonas mossii DSM 22836] Length = 55 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG + I PD C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACG--TCIDECPVNAISEG-DIYKIDPDACTDCGTCADACPTEAIHP 54 >gi|224371439|ref|YP_002605603.1| putative ferredoxin [Desulfobacterium autotrophicum HRM2] gi|223694156|gb|ACN17439.1| putative ferredoxin [Desulfobacterium autotrophicum HRM2] Length = 122 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++ E C C C++ C V+ E+ I DECI CGVC CP +A++ D E Sbjct: 1 MPWINKELCTGC--QTCIDECSVEAISMEEDIAFIDEDECIRCGVCHDVCPENAVRHDGE 58 >gi|212634995|ref|YP_002311520.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212556479|gb|ACJ28933.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 230 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 +YV T C C CV+VCP Y+ + L + D+CI C C CP I + + Sbjct: 47 SYVPT-MCNHCSDAACVKVCPTGAMYKDKRGLTLQDNDKCIGCRKCMRACPYGVISYNKQ 105 Query: 61 PGLELWLKINS--EYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGG 110 W + E AT P + KK V K Y +P G Sbjct: 106 KPHRKWQDDQALLEGATASPYMLLKK-----------VDNKVVPYLNPERGD 146 >gi|313672580|ref|YP_004050691.1| 4fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] gi|312939336|gb|ADR18528.1| 4Fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + +T+ C C C + CPV E + I D C DCG C CPVDAI+ Sbjct: 1 MAHFITDACTNCG--ACEDECPVGAISEADGKRVIDADTCTDCGACAEVCPVDAIE 54 >gi|212696952|ref|ZP_03305080.1| hypothetical protein ANHYDRO_01515 [Anaerococcus hydrogenalis DSM 7454] gi|212676040|gb|EEB35647.1| hypothetical protein ANHYDRO_01515 [Anaerococcus hydrogenalis DSM 7454] Length = 526 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y++ E CI C C +CPV E N I D+CI CG C CP++AI Sbjct: 470 LSYLIGEKCIGCG--KCKMLCPVGAISGEKRNRHEIDHDKCIKCGQCMENCPIEAI 523 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + ++CI CG C+ CPV AI + E Sbjct: 472 YLIGEKCIGCGKCKMLCPVGAISGEKRNRHE 502 >gi|182419411|ref|ZP_02950663.1| iron-dependent hydrogenase [Clostridium butyricum 5521] gi|237666562|ref|ZP_04526547.1| ferredoxin hydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376742|gb|EDT74314.1| iron-dependent hydrogenase [Clostridium butyricum 5521] gi|237657761|gb|EEP55316.1| ferredoxin hydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 495 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 24/57 (42%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C VC I +C +CG+C+ CP DAI D P Sbjct: 106 VTDACRNCIAHKCQSVCNFGAISYVNGRAHIDTTKCKECGMCKKACPYDAIAQDMRP 162 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDC 43 ++ T C C C + CP D + I +CI+C Sbjct: 134 AHIDTTKCKECG--MCKKACPYDAIAQDMRPCKRACPTGAINFNKYDLSTEITESKCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI+ Sbjct: 192 GACMASCPFGAIED 205 >gi|95931411|ref|ZP_01314119.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] gi|95132529|gb|EAT14220.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] Length = 165 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ CI C CV+VCP + EG + ++ CI C VC+ ECPV+AI+ TE Sbjct: 58 SQMCINC--QTCVDVCPTNAIVEGNDTCVVNATLCIGCQVCDAECPVEAIEEGTE 110 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 V CI C C CPV+ EG +A ++ DEC+ CG C ECP +AI Sbjct: 85 VNATLCIGC--QVCDAECPVEAIEEGTEIIAPTVYTDECVACGACTNECPTNAI 136 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 V T+ C+ C C CP + GE + I + C C C CPV Sbjct: 116 VYTDECVACG--ACTNECPTNAISVGE-YAVITINACSGCRKCVDSCPVQ 162 >gi|167622051|ref|YP_001672345.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352073|gb|ABZ74686.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQF 106 >gi|310658217|ref|YP_003935938.1| [fe] hydrogenase, electron-transfer subunit [Clostridium sticklandii DSM 519] gi|308824995|emb|CBH21033.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium sticklandii] Length = 625 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y++ E CI C T C +VCPV C + I ++CI CG C CPV+AI Sbjct: 570 YMINEEKCIGC--TKCAKVCPVSCISGKVKEKHVIDQNQCIKCGACFDACPVNAI 622 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CP + I+ ++CI C C CPV I Sbjct: 557 KICPAGA-CQSLLKYMINEEKCIGCTKCAKVCPVSCI 592 >gi|291165527|gb|EFE27577.1| ferredoxin [Filifactor alocis ATCC 35896] gi|320120475|gb|ADW16160.1| hypothetical protein HMPREF0389_01715 [Filifactor alocis ATCC 35896] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++++CI C C CPV +G+ I CIDCG C CPV A K + Sbjct: 1 MAYKISDSCIGCG--ACEGECPVGAISQGDTQYIIDASACIDCGACAGVCPVGAPKAE 56 >gi|319938422|ref|ZP_08012816.1| Fe-hydrogenase large subunit family protein [Coprobacillus sp. 29_1] gi|319806338|gb|EFW03005.1| Fe-hydrogenase large subunit family protein [Coprobacillus sp. 29_1] Length = 502 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C C C EVCP I ++CI CG+C CP AI Sbjct: 114 VTDACQGCLAHPCKEVCPKGAIDIINGRSIIDQEKCIKCGLCIKNCPYGAI 164 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 19/68 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 E CI C C++ CP + E I D+C+ CG+C Sbjct: 147 EKCIKCGL--CIKNCPYGAIMKMERPCAKACGMDAIQTDEHGHADIDYDKCVSCGMCLVN 204 Query: 50 CPVDAIKP 57 CP AI Sbjct: 205 CPFGAISD 212 >gi|126176326|ref|YP_001052475.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999531|gb|ABN63606.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 187 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY ++ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYRTDDGIVLHNKDACIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|326383779|ref|ZP_08205464.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197543|gb|EGD54732.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 460 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE--LWLKINSEYATQWPNITTKKESLPS 89 L I P C+DCG C CPV AI P E + +N+ +P + P Sbjct: 1 MLYIDPSTCVDCGACVSACPVGAIVPGHRLSDEAARFADVNA---GHYPGVEQSDTRFPV 57 Query: 90 AAKM 93 + Sbjct: 58 RTEW 61 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 2/31 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN 31 M Y+ C+ C CV CPV G Sbjct: 1 MLYIDPSTCVDCG--ACVSACPVGAIVPGHR 29 >gi|295103488|emb|CBL01032.1| Iron only hydrogenase large subunit, C-terminal domain [Faecalibacterium prausnitzii SL3/3] Length = 517 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I D+CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQDKCIKCGRCVTVCPYNAIVKTERP 177 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDE----------CIDCGVCEPE 49 + CI C CV VCP + + E AIH DE C+ CG C Sbjct: 154 DKCIKCG--RCVTVCPYNAIVKTERPCAAACGMGAIHSDELGRAEIDYSKCVSCGQCLVN 211 Query: 50 CPVDAI 55 CP AI Sbjct: 212 CPFGAI 217 >gi|157963943|ref|YP_001503977.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848943|gb|ABV89442.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 189 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQF 106 >gi|325845863|ref|ZP_08169061.1| protein HymB [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481769|gb|EGC84801.1| protein HymB [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 526 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y++ E CI C C +CPV E N I D+CI CG C CP++AI Sbjct: 470 LSYLIGEKCIGCG--KCKMLCPVGAISGEKRNRHEIDHDKCIKCGQCMENCPIEAI 523 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + ++CI CG C+ CPV AI + E Sbjct: 472 YLIGEKCIGCGKCKMLCPVGAISGEKRNRHE 502 >gi|262276170|ref|ZP_06053979.1| formate dehydrogenase-O iron-sulfur subunit [Grimontia hollisae CIP 101886] gi|262219978|gb|EEY71294.1| formate dehydrogenase-O iron-sulfur subunit [Grimontia hollisae CIP 101886] Length = 201 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTEDGIVLHNKDTCIGCGYCLFACPFGAPQF 106 >gi|163731475|ref|ZP_02138922.1| iron-sulfur cluster-binding protein, putative [Roseobacter litoralis Och 149] gi|161394929|gb|EDQ19251.1| iron-sulfur cluster-binding protein, putative [Roseobacter litoralis Och 149] Length = 678 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP AI D P ++ ++ Sbjct: 307 TKCLDVCPTGAITSAGDHVAIDPLICAGCGACSALCPSGAITYDAPPVGSVFSRL 361 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP AI Sbjct: 525 VDTDACTLCL--SCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAI 576 >gi|170729130|ref|YP_001763156.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814477|gb|ACA89061.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 196 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP DCFY ++ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCQAVCPADCFYRTDDGIVLHNKDTCIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|218132108|ref|ZP_03460912.1| hypothetical protein BACEGG_03736 [Bacteroides eggerthii DSM 20697] gi|317477110|ref|ZP_07936351.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|319900101|ref|YP_004159829.1| ferredoxin [Bacteroides helcogenes P 36-108] gi|329956776|ref|ZP_08297345.1| ferredoxin [Bacteroides clarus YIT 12056] gi|329964134|ref|ZP_08301300.1| ferredoxin [Bacteroides fluxus YIT 12057] gi|217985758|gb|EEC52099.1| hypothetical protein BACEGG_03736 [Bacteroides eggerthii DSM 20697] gi|316906653|gb|EFV28366.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|319415132|gb|ADV42243.1| ferredoxin [Bacteroides helcogenes P 36-108] gi|328523815|gb|EGF50902.1| ferredoxin [Bacteroides clarus YIT 12056] gi|328525654|gb|EGF52683.1| ferredoxin [Bacteroides fluxus YIT 12057] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV++++CI C C++ CPV EG + +I P+ C +CG C CP +AI P Sbjct: 1 MAYVISDDCIACG--TCIDECPVGAISEG-DIYSIDPETCTECGTCADVCPSEAIHP 54 >gi|302873024|ref|YP_003841657.1| hypothetical protein Clocel_0104 [Clostridium cellulovorans 743B] gi|307688817|ref|ZP_07631263.1| ferredoxin, 4Fe-4S [Clostridium cellulovorans 743B] gi|302575881|gb|ADL49893.1| hypothetical protein Clocel_0104 [Clostridium cellulovorans 743B] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++CI C C CPV +G+ I+ CIDCG C CPV A Sbjct: 1 MAYVINDSCISCG--ACASECPVSAINQGDAQYEINDSSCIDCGNCANVCPVGAP 53 >gi|298372543|ref|ZP_06982533.1| ferredoxin, 4Fe-4S [Bacteroidetes oral taxon 274 str. F0058] gi|298275447|gb|EFI16998.1| ferredoxin, 4Fe-4S [Bacteroidetes oral taxon 274 str. F0058] Length = 55 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+T++C+ C C+ CPV EG + I P C CG C CP +AI P+ Sbjct: 1 MAYVITDDCVACG--TCIGECPVGAISEG-DIYVIDPTACTSCGTCAEVCPSEAIHPE 55 >gi|167622055|ref|YP_001672349.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352077|gb|ABZ74690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQFPKQGAF 112 >gi|20806703|ref|NP_621874.1| uncharacterized Fe-S center protein [Thermoanaerobacter tengcongensis MB4] gi|20515157|gb|AAM23478.1| uncharacterized Fe-S center protein [Thermoanaerobacter tengcongensis MB4] Length = 372 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV I CI CG C C IKP + Sbjct: 190 VVGKGCTAC--QMCIRNCPVGAISLVNGSAYIDHSICIGCGECVSMCQYGVIKPQWGTDM 247 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 248 DAFIERMTEYA 258 >gi|302379538|ref|ZP_07268023.1| protein HymB [Finegoldia magna ACS-171-V-Col3] gi|303234547|ref|ZP_07321184.1| protein HymB [Finegoldia magna BVS033A4] gi|302312445|gb|EFK94441.1| protein HymB [Finegoldia magna ACS-171-V-Col3] gi|302494381|gb|EFL54150.1| protein HymB [Finegoldia magna BVS033A4] Length = 626 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C + I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCIEGAVKKQHVIDKSQCIKCGNCETVCPVHAV 623 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 38 DECIDCGVCEPECPVDAIK 56 D+CI C C CPV I+ Sbjct: 576 DKCIGCTKCAKNCPVSCIE 594 >gi|149201541|ref|ZP_01878515.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|149144589|gb|EDM32618.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 651 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C+++CP + ++I P C CG C CP AI D P + +I Sbjct: 282 CLDICPTGAISPDGDHVSIDPMICAGCGACAARCPSGAITYDAPPPDMTFRRI 334 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 V TE+C LC CV +CP + E+ L D C+ CG+C CP AI + Sbjct: 498 VNTESCTLCL--SCVSLCPSGALMDNEDKPQLRFQEDACLQCGICATICPEKAITLE 552 >gi|260778688|ref|ZP_05887580.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260604852|gb|EEX31147.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 202 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|294338873|emb|CAZ87210.1| BoxA (Benzoyl-CoA oxygenase component A) [Thiomonas sp. 3As] Length = 424 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 8/102 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C CPV N + D+C C C P CP AI + + Sbjct: 17 EICIRCN--TCEATCPVGAITHDANNYVVDADKCNFCMACVPPCPTGAIDNWRDVPRDQA 74 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNP 108 +++++ W + + +G + P Sbjct: 75 YPLDAQF--GWDVLPEPLDP----QDWEGADAEAPAQVDAMP 110 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 14/24 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPV AI D Sbjct: 14 IDPEICIRCNTCEATCPVGAITHD 37 >gi|291530322|emb|CBK95907.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium siraeum 70/3] gi|291557135|emb|CBL34252.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium siraeum V10Sc8a] Length = 56 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++++CI C C CPV+ EG+ I D C+ CG C CPV A + Sbjct: 1 MAYKISDDCISCG--ACAAQCPVEAISEGDGKYVIDADTCVSCGACAGVCPVGAPAEE 56 >gi|169824852|ref|YP_001692463.1| NADP-reducing hydrogenase [Finegoldia magna ATCC 29328] gi|167831657|dbj|BAG08573.1| NADP-reducing hydrogenase [Finegoldia magna ATCC 29328] Length = 626 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T+ CI C T C + CPV C + I +CI CG CE CPV A+ Sbjct: 570 LSYEITDKCIGC--TKCAKNCPVSCIEGAVKKQHVIDKSQCIKCGNCETVCPVHAV 623 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 38 DECIDCGVCEPECPVDAIK 56 D+CI C C CPV I+ Sbjct: 576 DKCIGCTKCAKNCPVSCIE 594 >gi|327400634|ref|YP_004341473.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316142|gb|AEA46758.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 243 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V + C C++ CV VCPV Y ++ + + ++CI CG C CP A E Sbjct: 109 YFVPKLCNQCENAPCVAVCPVGATYMTDDGVVLVDYEKCIGCGYCVSACPYGARYLYPED 168 Query: 62 GLELWL 67 G ++ Sbjct: 169 GESEYM 174 >gi|163749870|ref|ZP_02157115.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] gi|161330384|gb|EDQ01363.1| formate dehydrogenase, iron-sulfur subunit [Shewanella benthica KT99] Length = 186 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY+ E+ L +H D CI CG C CP A + + Sbjct: 50 ISVACMHCTDAPCMAVCPANCFYQTEDGLTLHNKDTCIGCGYCLYACPFGAPQFPKKGAF 109 >gi|149908806|ref|ZP_01897466.1| putative formate dehydrogenase, iron-sulfur subunit [Moritella sp. PE36] gi|149808080|gb|EDM68021.1| putative formate dehydrogenase, iron-sulfur subunit [Moritella sp. PE36] Length = 205 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFERTEDGIVLHDKDLCIGCGYCLFACPFGAPQFPKQDAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|330835620|ref|YP_004410348.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567759|gb|AEB95864.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 405 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C C + C+ CP + + +N + I+ ++CI CG C+ CP +A+ + + Sbjct: 58 SCNHCDNPVCLSSCPANAITKDKNGIVKINSEKCIGCGYCQWACPYEALHFSKDGTMSKC 117 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 P + Y +P Sbjct: 118 HLCFDRLGKGLPYCVEACPTGALTFGWLKEPDGNVSYLAP 157 Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 13/57 (22%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC----G----VCEPECPVDA 54 +E CI C + C CP + + ++ +C C G C CP A Sbjct: 88 SEKCIGCGY--CQWACPYEALHFSKDGTM---SKCHLCFDRLGKGLPYCVEACPTGA 139 >gi|327310274|ref|YP_004337171.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Thermoproteus uzoniensis 768-20] gi|326946753|gb|AEA11859.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Thermoproteus uzoniensis 768-20] Length = 595 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVV + C C C V + + I P C C +C CP DAIKP Sbjct: 526 YVVADKCRSCG--ICYNVLKCYAIAKLPDGKAWIDPSLCSGCSMCAQVCPYDAIKPTEPE 583 Query: 62 GLELWLKI 69 + WL++ Sbjct: 584 KVGKWLEL 591 >gi|282882984|ref|ZP_06291588.1| ferredoxin [Peptoniphilus lacrimalis 315-B] gi|300813228|ref|ZP_07093596.1| ferredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297191|gb|EFA89683.1| ferredoxin [Peptoniphilus lacrimalis 315-B] gi|300512681|gb|EFK39813.1| ferredoxin [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 56 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y +T+ CI C C CPVDC +G + I+PD+CIDCG C CPV A P+ Sbjct: 1 MAYKITDACIACG--ACQAECPVDCISDG-DIYQINPDQCIDCGSCAGVCPVGAPVPED 56 >gi|313205384|ref|YP_004044041.1| 4fe-4S ferredoxin iroN-sulfur binding domain protein [Paludibacter propionicigenes WB4] gi|312444700|gb|ADQ81056.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Paludibacter propionicigenes WB4] Length = 321 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 9/78 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA------ 54 Y + + C C + CV VCPVD ++ ++ + I + CI C C CP A Sbjct: 139 AYYMPKPCQHCDNPPCVAVCPVDATFKRQDGIVLIDNERCIGCRFCIAACPYSARIFNWA 198 Query: 55 --IKPDTEPGLELWLKIN 70 IK + G +++N Sbjct: 199 EPIKSLEDEGQPYNVELN 216 >gi|225017215|ref|ZP_03706407.1| hypothetical protein CLOSTMETH_01141 [Clostridium methylpentosum DSM 5476] gi|224949990|gb|EEG31199.1| hypothetical protein CLOSTMETH_01141 [Clostridium methylpentosum DSM 5476] Length = 57 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y++ ++CI C C CPV+ EG+ I D CI+CG C CPV+A P+ Sbjct: 1 MAYIINDDCISCG--ACEAECPVNAITEGDGKYCIDKDTCIECGACAGVCPVNAPNPE 56 >gi|150377582|ref|YP_001314177.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150032129|gb|ABR64244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 198 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPVDCFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTADAVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|262402193|ref|ZP_06078754.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC586] gi|262350975|gb|EEZ00108.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC586] Length = 202 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|218961763|ref|YP_001741538.1| putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules) [Candidatus Cloacamonas acidaminovorans] gi|167730420|emb|CAO81332.1| putative electron transfer flavoprotein alpha-subunit (etfA and 4Fe-4S ferredoxin modules) [Candidatus Cloacamonas acidaminovorans] Length = 398 Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V+ E C+ C C+ C D E I D+C+ CG C CP DAI Sbjct: 3 MIEVLIEKCVGCG--ACLRACAYDAIKIEEKLAIIDSDKCVLCGACVSACPFDAI 55 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++C+ CG C C DAIK + + Sbjct: 9 EKCVGCGACLRACAYDAIKIEEK 31 >gi|158321273|ref|YP_001513780.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] gi|158141472|gb|ABW19784.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] Length = 631 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 + +TE CI C T C CPV C + I + CI CG C CPV A+ Sbjct: 577 FYITEKCIGC--TKCARNCPVSCISGKVKERHVIDTEACIKCGNCMAVCPVGAV 628 >gi|85704196|ref|ZP_01035299.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85671516|gb|EAQ26374.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 653 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C+++CP + ++I P C CG C CP AI D P + +I Sbjct: 282 CLDICPTGAITPDGDHVSIDPMICAGCGACAARCPSGAITYDAPPPDMTFRRI 334 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 V T+ C LC CV +CP + E+ L D C+ CG+C CP AI + Sbjct: 500 VNTDACTLCL--SCVSLCPSGALMDNEDKPQLRFQEDACLQCGICATICPEKAITLE 554 >gi|126697745|ref|YP_001086642.1| ferredoxin [Clostridium difficile 630] gi|254973833|ref|ZP_05270305.1| ferredoxin [Clostridium difficile QCD-66c26] gi|255091219|ref|ZP_05320697.1| ferredoxin [Clostridium difficile CIP 107932] gi|255099336|ref|ZP_05328313.1| ferredoxin [Clostridium difficile QCD-63q42] gi|255305170|ref|ZP_05349342.1| ferredoxin [Clostridium difficile ATCC 43255] gi|255312877|ref|ZP_05354460.1| ferredoxin [Clostridium difficile QCD-76w55] gi|255515636|ref|ZP_05383312.1| ferredoxin [Clostridium difficile QCD-97b34] gi|255648730|ref|ZP_05395632.1| ferredoxin [Clostridium difficile QCD-37x79] gi|260681952|ref|YP_003213237.1| ferredoxin [Clostridium difficile CD196] gi|260685550|ref|YP_003216683.1| ferredoxin [Clostridium difficile R20291] gi|306518850|ref|ZP_07405197.1| ferredoxin [Clostridium difficile QCD-32g58] gi|115249182|emb|CAJ66994.1| Ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) [Clostridium difficile] gi|260208115|emb|CBA60382.1| ferredoxin [Clostridium difficile CD196] gi|260211566|emb|CBE01761.1| ferredoxin [Clostridium difficile R20291] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV C G++ I CIDCG C CPVDA +P+ Sbjct: 1 MAYKITDACISCG--ACEAECPVSCISAGDDAYVIDAGSCIDCGSCAGACPVDAPQPE 56 >gi|255659932|ref|ZP_05405341.1| conserved domain protein [Mitsuokella multacida DSM 20544] gi|260847803|gb|EEX67810.1| conserved domain protein [Mitsuokella multacida DSM 20544] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y + ++CI C C CPV+ EG I D+C++CG C CPV AI+ Sbjct: 1 MAYKINDDCISCG--SCAATCPVEAISEGAEHYEIDADKCVECGACAAGCPVSAIE 54 >gi|153810606|ref|ZP_01963274.1| hypothetical protein RUMOBE_00987 [Ruminococcus obeum ATCC 29174] gi|149833785|gb|EDM88866.1| hypothetical protein RUMOBE_00987 [Ruminococcus obeum ATCC 29174] gi|295108222|emb|CBL22175.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus obeum A2-162] Length = 57 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+++ C+ C C CP + EG I D C+DCG C CP +AI P Sbjct: 1 MAYVISDECVSCG--TCAAECPAEAISEGAEHFEIDADACLDCGTCADACPTEAIHP 55 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 15/30 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + DEC+ CG C ECP +AI E Sbjct: 1 MAYVISDECVSCGTCAAECPAEAISEGAEH 30 >gi|269102696|ref|ZP_06155393.1| formate dehydrogenase-O iron-sulfur subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268162594|gb|EEZ41090.1| formate dehydrogenase-O iron-sulfur subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 207 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + P Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSQTEDGIVQHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 + + + Sbjct: 110 QAFAE 114 >gi|217971441|ref|YP_002356192.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|217496576|gb|ACK44769.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] Length = 198 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP DCFY + + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYRTVDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|323499043|ref|ZP_08104023.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sinaloensis DSM 21326] gi|323315878|gb|EGA68909.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sinaloensis DSM 21326] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|309388856|gb|ADO76736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halanaerobium praevalens DSM 2228] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V++++CILC C CPV+C EG+ I D+CIDC C CPVDAI Sbjct: 1 MAHVISDDCILCG--ACAPECPVECISEGDTQYEIAADDCIDCAACVSVCPVDAI 53 >gi|218709475|ref|YP_002417096.1| formate dehydrogenase iron-sulfur subunit [Vibrio splendidus LGP32] gi|218322494|emb|CAV18651.1| Formate dehydrogenase iron-sulfur subunit [Vibrio splendidus LGP32] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|148378067|ref|YP_001252608.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 3502] gi|153934228|ref|YP_001382466.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 19397] gi|153936953|ref|YP_001386018.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. Hall] gi|153941409|ref|YP_001389424.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. Langeland] gi|168181164|ref|ZP_02615828.1| ferredoxin, 4Fe-4S [Clostridium botulinum NCTC 2916] gi|168185099|ref|ZP_02619763.1| ferredoxin, 4Fe-4S [Clostridium botulinum Bf] gi|170755610|ref|YP_001779687.1| ferredoxin, 4Fe-4S [Clostridium botulinum B1 str. Okra] gi|170758331|ref|YP_001785390.1| ferredoxin, 4Fe-4S [Clostridium botulinum A3 str. Loch Maree] gi|187777348|ref|ZP_02993821.1| hypothetical protein CLOSPO_00900 [Clostridium sporogenes ATCC 15579] gi|226947285|ref|YP_002802376.1| ferredoxin, 4Fe-4S [Clostridium botulinum A2 str. Kyoto] gi|237793373|ref|YP_002860925.1| ferredoxin, 4Fe-4S [Clostridium botulinum Ba4 str. 657] gi|148287551|emb|CAL81615.1| ferredoxin [Clostridium botulinum A str. ATCC 3502] gi|152930272|gb|ABS35772.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. ATCC 19397] gi|152932867|gb|ABS38366.1| ferredoxin, 4Fe-4S [Clostridium botulinum A str. Hall] gi|152937305|gb|ABS42803.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. Langeland] gi|169120822|gb|ACA44658.1| ferredoxin, 4Fe-4S [Clostridium botulinum B1 str. Okra] gi|169405320|gb|ACA53731.1| ferredoxin, 4Fe-4S [Clostridium botulinum A3 str. Loch Maree] gi|182667994|gb|EDT79973.1| ferredoxin, 4Fe-4S [Clostridium botulinum NCTC 2916] gi|182671843|gb|EDT83804.1| ferredoxin, 4Fe-4S [Clostridium botulinum Bf] gi|187774276|gb|EDU38078.1| hypothetical protein CLOSPO_00900 [Clostridium sporogenes ATCC 15579] gi|226844082|gb|ACO86748.1| ferredoxin, 4Fe-4S [Clostridium botulinum A2 str. Kyoto] gi|229261182|gb|ACQ52215.1| ferredoxin, 4Fe-4S [Clostridium botulinum Ba4 str. 657] gi|295317534|gb|ADF97911.1| ferredoxin, 4Fe-4S [Clostridium botulinum F str. 230613] gi|322804331|emb|CBZ01881.1| ferredoxin [Clostridium botulinum H04402 065] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ C+ C C CPV+ +G++ I D CIDCG C CPV A D Sbjct: 1 MAYKITDACVSCG--ACAAECPVNAISQGDSIFDIDADTCIDCGNCANVCPVGAPVQD 56 >gi|119776744|ref|YP_929484.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119769244|gb|ABM01815.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] Length = 198 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP +CFY+ ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPANCFYKTDDGIVLHNKDTCIGCGYCFYACPFGAPQF 106 >gi|89074879|ref|ZP_01161329.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium sp. SKA34] gi|90578566|ref|ZP_01234376.1| putative formate dehydrogenase, iron-sulfur subunit [Vibrio angustum S14] gi|89049276|gb|EAR54839.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium sp. SKA34] gi|90439399|gb|EAS64580.1| putative formate dehydrogenase, iron-sulfur subunit [Vibrio angustum S14] Length = 205 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + P Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSQTEDGIVQHDKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFAE 114 >gi|113972052|ref|YP_735845.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886736|gb|ABI40788.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 189 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHNKDACIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|167770142|ref|ZP_02442195.1| hypothetical protein ANACOL_01485 [Anaerotruncus colihominis DSM 17241] gi|167667464|gb|EDS11594.1| hypothetical protein ANACOL_01485 [Anaerotruncus colihominis DSM 17241] Length = 479 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V C C C CP + I ++C++CG C CP AI T P Sbjct: 95 YHVGSACRGCIAHRCEHACPTGAISVHDGKAHIDQEKCVECGRCATACPYSAIMKYTRP 153 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCG 44 ++ E C+ C C CP + +N I D+CI CG Sbjct: 125 AHIDQEKCVECG--RCATACPYSAIMKYTRPCENACKIKAISMHRDNSAKIDNDKCIACG 182 Query: 45 VCEPECPVDAI 55 C +CP AI Sbjct: 183 ACVYQCPFGAI 193 >gi|148976175|ref|ZP_01812918.1| formate dehydrogenase, iron-sulfur subunit [Vibrionales bacterium SWAT-3] gi|145964570|gb|EDK29824.1| formate dehydrogenase, iron-sulfur subunit [Vibrionales bacterium SWAT-3] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|84385483|ref|ZP_00988514.1| formate dehydrogenase, iron-sulfur subunit [Vibrio splendidus 12B01] gi|86145998|ref|ZP_01064325.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. MED222] gi|84379463|gb|EAP96315.1| formate dehydrogenase, iron-sulfur subunit [Vibrio splendidus 12B01] gi|85836203|gb|EAQ54334.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. MED222] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|24375991|ref|NP_720034.1| formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] gi|24350990|gb|AAN57478.1|AE015883_9 formate dehydrogenase, iron-sulfur subunit [Shewanella oneidensis MR-1] Length = 189 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQF 106 >gi|261252991|ref|ZP_05945564.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio orientalis CIP 102891] gi|260936382|gb|EEX92371.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio orientalis CIP 102891] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|28898288|ref|NP_797893.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|153837744|ref|ZP_01990411.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ3810] gi|260361862|ref|ZP_05774871.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|260878625|ref|ZP_05890980.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|260896157|ref|ZP_05904653.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|260899667|ref|ZP_05908062.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|28806505|dbj|BAC59777.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748849|gb|EDM59684.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ3810] gi|308086168|gb|EFO35863.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus Peru-466] gi|308091052|gb|EFO40747.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AN-5034] gi|308109456|gb|EFO46996.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus AQ4037] gi|308111412|gb|EFO48952.1| formate dehydrogenase iron-sulfur subunit [Vibrio parahaemolyticus K5030] gi|328473703|gb|EGF44538.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 10329] Length = 202 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|34541097|ref|NP_905576.1| ferredoxin, 4Fe-4S [Porphyromonas gingivalis W83] gi|188994759|ref|YP_001929011.1| ferredoxin 4Fe-4S [Porphyromonas gingivalis ATCC 33277] gi|34397412|gb|AAQ66475.1| ferredoxin, 4Fe-4S [Porphyromonas gingivalis W83] gi|188594439|dbj|BAG33414.1| ferredoxin 4Fe-4S [Porphyromonas gingivalis ATCC 33277] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG I D CIDCG C CP +AI P Sbjct: 1 MAYVINDSCVACG--SCIDECPVSAISEGS-IYKIDADTCIDCGTCAAACPSEAIHP 54 >gi|315452565|ref|YP_004072835.1| putative formate dehydrogenase subunit B [Helicobacter felis ATCC 49179] gi|315131617|emb|CBY82245.1| putative formate dehydrogenase subunit B [Helicobacter felis ATCC 49179] Length = 212 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C C C +VCPVDCFY E+ + +H + CI CG C CP A + + Sbjct: 64 ISIACQHCTDAPCAQVCPVDCFYIREDGIVLHNKETCIGCGYCLYACPFGAPQFPRDGAF 123 >gi|268610306|ref|ZP_06144033.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y+++++CI C C CPV EG+ I D C++CG C CPV A + Sbjct: 1 MAYIISDDCISCG--ACAGECPVSAISEGDGKYQIDADACVECGACAGVCPVGAPNAE 56 >gi|189464155|ref|ZP_03012940.1| hypothetical protein BACINT_00491 [Bacteroides intestinalis DSM 17393] gi|189437945|gb|EDV06930.1| hypothetical protein BACINT_00491 [Bacteroides intestinalis DSM 17393] Length = 56 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG + +I P+ C DCG C CP +AI P Sbjct: 1 MAYVINDSCVACG--TCIDECPVGAISEG-DIYSIDPETCTDCGTCADVCPSEAIHP 54 >gi|157831039|pdb|1FCA|A Chain A, Structure Of The Ferredoxin From Clostridium Acidurici: Model At 1.8 Angstroms Resolution Length = 55 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E CI C C CPVD +G + I D CIDCG C CPVDA Sbjct: 1 AYVINEACISCG--ACEPECPVDAISQGGSRYVIDADTCIDCGACAGVCPVDAP 52 >gi|78185918|ref|YP_373961.1| Fe-S-cluster-containing hydrogenase components 1-like [Chlorobium luteolum DSM 273] gi|78165820|gb|ABB22918.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Chlorobium luteolum DSM 273] Length = 523 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C+ CV++CPV+ ++ + + CI C C CP +++ D E Sbjct: 51 YFTVLRCNHCEEPPCVDICPVEALHKRPDGIVDFDSRRCIGCKACAQACPYNSVYIDPE 109 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 7/19 (36%) Query: 32 FLAIHPDECIDCGVCEPEC 50 I +CI C C C Sbjct: 4 GFVIDARKCIGCHACSVAC 22 >gi|254508923|ref|ZP_05121031.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 16] gi|219548162|gb|EED25179.1| formate dehydrogenase, iron-sulfur subunit [Vibrio parahaemolyticus 16] Length = 199 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 50 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 106 Query: 64 ELWLK 68 E + + Sbjct: 107 EAFGE 111 >gi|187934487|ref|YP_001886193.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] gi|187722640|gb|ACD23861.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum B str. Eklund 17B] Length = 646 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 219 TITKKCIGCG--SCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 +CI CG C+ CPVD I D E + + N Sbjct: 223 KCIGCGSCKRACPVDCI--DGELKKQHNIDYN 252 Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL 33 C C C+ CPVD G N + Sbjct: 254 CTHCG--ACISACPVDAITAGNNTI 276 >gi|110634791|ref|YP_674999.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110285775|gb|ABG63834.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 198 Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPVDCFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVDCFYTTADAVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|317489682|ref|ZP_07948186.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911276|gb|EFV32881.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 237 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + C+ C++ CV VCPV Y GE+ + I D CI C C CP A Sbjct: 81 IPRPCMQCENPACVSVCPVSATYRGEDGIVVIDADRCIGCKYCIAACPYGA 131 >gi|326202931|ref|ZP_08192798.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium papyrosolvens DSM 2782] gi|325987008|gb|EGD47837.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium papyrosolvens DSM 2782] Length = 56 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +++ CI C C CPV C G++ I D CI+CG C CPVDA + Sbjct: 1 MAYSISDACISCG--ACESECPVSCITAGDSVYVIDEDTCIECGACANVCPVDAPQQ 55 >gi|91223723|ref|ZP_01258987.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 12G01] gi|254229547|ref|ZP_04922960.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. Ex25] gi|262394264|ref|YP_003286118.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. Ex25] gi|91191215|gb|EAS77480.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 12G01] gi|151937920|gb|EDN56765.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. Ex25] gi|262337858|gb|ACY51653.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. Ex25] Length = 202 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFGE 114 >gi|262165716|ref|ZP_06033453.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus VM223] gi|262171469|ref|ZP_06039147.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus MB-451] gi|261892545|gb|EEY38531.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus MB-451] gi|262025432|gb|EEY44100.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio mimicus VM223] Length = 202 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|297618232|ref|YP_003703391.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297146069|gb|ADI02826.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 58 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M+YV+T+ C+ C CV+ CPV E E+ I P+ C +CG C CP A K Sbjct: 1 MSYVITDECVACGV--CVDECPVGAITEHEDKYIIDPELCTECGSCVDACPTGAPK 54 >gi|260588646|ref|ZP_05854559.1| Fe-hydrogenase large subunit family protein [Blautia hansenii DSM 20583] gi|331082003|ref|ZP_08331131.1| hypothetical protein HMPREF0992_00055 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541121|gb|EEX21690.1| Fe-hydrogenase large subunit family protein [Blautia hansenii DSM 20583] gi|330405598|gb|EGG85128.1| hypothetical protein HMPREF0992_00055 [Lachnospiraceae bacterium 6_1_63FAA] Length = 501 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C E+CP + I ++CI CG C+ CP DAI P Sbjct: 115 YEVSNMCRGCVAHPCKEICPKGAISIIKGKSVIDQEKCIKCGKCKSVCPYDAIAKKERP 173 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 19/68 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCGVCEPE 49 E CI C C VCP D + E I+ ++C+ CG+C Sbjct: 150 EKCIKCG--KCKSVCPYDAIAKKERPCARACGVNAIESDEMGRATINNEKCVSCGMCMVS 207 Query: 50 CPVDAIKP 57 CP AI Sbjct: 208 CPFGAISD 215 >gi|153832374|ref|ZP_01985041.1| formate dehydrogenase iron-sulfur subunit [Vibrio harveyi HY01] gi|156974561|ref|YP_001445468.1| hypothetical protein VIBHAR_02279 [Vibrio harveyi ATCC BAA-1116] gi|269963064|ref|ZP_06177400.1| formate dehydrogenase, iron-sulfur subunit [Vibrio harveyi 1DA3] gi|148871403|gb|EDL70266.1| formate dehydrogenase iron-sulfur subunit [Vibrio harveyi HY01] gi|156526155|gb|ABU71241.1| hypothetical protein VIBHAR_02279 [Vibrio harveyi ATCC BAA-1116] gi|269832196|gb|EEZ86319.1| formate dehydrogenase, iron-sulfur subunit [Vibrio harveyi 1DA3] Length = 202 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|88603039|ref|YP_503217.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88188501|gb|ABD41498.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 369 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C + CV CP D + G+ C C C CP AI E + +L+ Sbjct: 197 CVGCGY--CVTQCPFDAIHMGKKATV-DKSVCYGCSACLQVCPEQAILFHWERDVPRFLE 253 Query: 69 INSEYA 74 +EYA Sbjct: 254 RMAEYA 259 Score = 40.5 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 I+ C+ CG C +CP DAI Sbjct: 191 EINESRCVGCGYCVTQCPFDAIH 213 >gi|119996|sp|P00200|FER_CLOTS RecName: Full=Ferredoxin Length = 55 Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +++T+ CI C C CPV+ +EG + D CIDCG CE CP A+K + Sbjct: 1 AHIITDECISCG--ACAAECPVEAIHEGTGKYEVDADTCIDCGACEAVCPTGAVKAE 55 >gi|291288299|ref|YP_003505115.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885459|gb|ADD69159.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 55 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + ++C C C + CPV EG++ I D C DCG C CPVDAI Sbjct: 1 MAYTINDSCTNCGV--CEDECPVGAISEGDDVRVIDADTCTDCGACAEVCPVDAI 53 >gi|326424045|ref|NP_761415.2| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus CMCP6] gi|319999422|gb|AAO10942.2| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus CMCP6] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|323344712|ref|ZP_08084936.1| ferredoxin [Prevotella oralis ATCC 33269] gi|323093982|gb|EFZ36559.1| ferredoxin [Prevotella oralis ATCC 33269] Length = 55 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++CI C C++ CPV EG N I+PD C +CG C CP +AI Sbjct: 1 MAYVISDDCIACG--SCIDECPVGAISEG-NKYNINPDMCTECGTCADVCPNEAI 52 >gi|150391791|ref|YP_001321840.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149951653|gb|ABR50181.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 598 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 VV+E C C C + CPVDC +G+ I ++CI CG C CP AI Sbjct: 544 VVSELCKKCG--ICAKKCPVDCISGVKGKEVYLIDQEKCIKCGACLEACPFKAI 595 >gi|153005941|ref|YP_001380266.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029514|gb|ABS27282.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 263 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++ V + C CK T CV+VCPV Y ++ L + D CI CG C CP Sbjct: 129 SFFVPKMCNHCKETPCVQVCPVGASYRTQDGLVLVDGDRCIGCGYCVQACPYG 181 >gi|78355772|ref|YP_387221.1| hydrogenase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218177|gb|ABB37526.1| hydrogenase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 483 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T C C CV+ CP D + I PD+C+ CG C CP AI Sbjct: 115 TSACRGCLAEACVQHCPKDAVRIVDGKSRIDPDKCVQCGKCMNVCPYHAI 164 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 21/64 (32%), Gaps = 15/64 (23%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 + C+ C C E CP + E I D CI CG C CP Sbjct: 147 DKCVQCGKCMNVCPYHAIVQIPIPCEESCPTGAISKDECGKQVIDYDRCIFCGKCMAACP 206 Query: 52 VDAI 55 A+ Sbjct: 207 FAAV 210 >gi|313157397|gb|EFR56820.1| ferredoxin [Alistipes sp. HGB5] Length = 55 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T++C+ C C+ CPV+ G + I P+ CIDCG C CP +AI P+ Sbjct: 1 MAYKITDSCVACG--TCIGECPVEAISAG-DIYVIDPNTCIDCGTCAGVCPSEAIIPE 55 >gi|170749608|ref|YP_001755868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656130|gb|ACB25185.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 198 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGCGYCFYACPFGAPQY 104 >gi|37679883|ref|NP_934492.1| formate dehydrogenase, iron-sulfur subunit [Vibrio vulnificus YJ016] gi|320156342|ref|YP_004188721.1| formate dehydrogenase-O, iron-sulfur subunit [Vibrio vulnificus MO6-24/O] gi|37198628|dbj|BAC94463.1| formate dehydrogenase, iron-sulfur subunit [Vibrio vulnificus YJ016] gi|319931654|gb|ADV86518.1| formate dehydrogenase-O, iron-sulfur subunit / Putative formate dehydrogenase iron-sulfur subunit [Vibrio vulnificus MO6-24/O] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|229529447|ref|ZP_04418837.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae 12129(1)] gi|229333221|gb|EEN98707.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae 12129(1)] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|163849840|ref|YP_001637883.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|188579726|ref|YP_001923171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|218528470|ref|YP_002419286.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240137064|ref|YP_002961533.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens AM1] gi|254559072|ref|YP_003066167.1| formate dehydrogenase iron-sulfur subunit beta [Methylobacterium extorquens DM4] gi|27902653|gb|AAO24617.1| formate dehydrogenase beta subunit [Methylobacterium extorquens] gi|163661445|gb|ABY28812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] gi|179343224|gb|ACB78636.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|218520773|gb|ACK81358.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|240007030|gb|ACS38256.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens AM1] gi|254266350|emb|CAX22114.1| Formate dehydrogenase iron-sulfur (beta) subunit [Methylobacterium extorquens DM4] Length = 198 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGCGYCFYACPFGAPQY 104 >gi|119776740|ref|YP_929480.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] gi|119769240|gb|ABM01811.1| formate dehydrogenase, iron-sulfur subunit [Shewanella amazonensis SB2B] Length = 189 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY+ E + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCSDAPCMAVCPANCFYKTEEGIVLHDKDTCIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|319790198|ref|YP_004151831.1| molybdopterin dinucleotide-binding region protein [Thermovibrio ammonificans HB-1] gi|317114700|gb|ADU97190.1| molybdopterin dinucleotide-binding region protein [Thermovibrio ammonificans HB-1] Length = 1172 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV CP + G + I +C C C P CP +AI D Sbjct: 90 CKQCFEHPCVSACPFNAISVGRGGVVVIDDSKCTGCEKCVPACPFNAIVMD 140 >gi|242239680|ref|YP_002987861.1| dimethylsulfoxide reductase, chain B [Dickeya dadantii Ech703] gi|242131737|gb|ACS86039.1| dimethylsulfoxide reductase, chain B [Dickeya dadantii Ech703] Length = 205 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP + +G+NF+ + CI C CE CP A + D Sbjct: 60 AYYLSVSCNHCSDPACTKVCPTGAMHKQGDNFVVVDESICIGCRYCEMACPYGAPQFDAA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|157963939|ref|YP_001503973.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848939|gb|ABV89438.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 189 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCDDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQFPKQGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GARGKMD 119 >gi|260772826|ref|ZP_05881742.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio metschnikovii CIP 69.14] gi|260611965|gb|EEX37168.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio metschnikovii CIP 69.14] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVKTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQSAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|170741277|ref|YP_001769932.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195551|gb|ACA17498.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 198 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|126727358|ref|ZP_01743193.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] gi|126703353|gb|EBA02451.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] Length = 650 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C+ VCP +AI P C CG C CP AI D P ++ ++ Sbjct: 280 NCLNVCPTGAIVSAGEHVAIDPMICAGCGACSAVCPSGAISYDAPPVETVFQRL 333 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 E+C LC CV +CP + + L D C+ CG+C CP +AI Sbjct: 500 ESCTLCL--SCVSLCPSGALADNPDMPQLRFQEDACLQCGLCSNICPENAI 548 >gi|325265417|ref|ZP_08132141.1| Fe-hydrogenase large subunit family protein [Clostridium sp. D5] gi|324029418|gb|EGB90709.1| Fe-hydrogenase large subunit family protein [Clostridium sp. D5] Length = 503 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C EVCP I ++CI CG C+ CP DAI P Sbjct: 117 YEVSNICKGCLAHPCQEVCPKGAISFVNGKSFIDQEKCIKCGKCKSVCPYDAIAKKERP 175 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ E CI C C VCP D + E I P++C+ CG Sbjct: 147 SFIDQEKCIKCG--KCKSVCPYDAIAKKERPCKNACGVSAIGSDKYGRAFIDPEKCVSCG 204 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 205 MCMVSCPFGAISD 217 >gi|269968574|ref|ZP_06182576.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 40B] gi|269826785|gb|EEZ81117.1| formate dehydrogenase, iron-sulfur subunit [Vibrio alginolyticus 40B] Length = 199 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 50 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 106 Query: 64 ELWLK 68 E + + Sbjct: 107 EAFGE 111 >gi|153956381|ref|YP_001397146.1| ferredoxin [Clostridium kluyveri DSM 555] gi|146349239|gb|EDK35775.1| Ferredoxin [Clostridium kluyveri DSM 555] Length = 57 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T+ C+ C C CPV+C +G+ I CIDCG C CPV A Sbjct: 1 MAYKITDACMNCG--ACASECPVECISQGDTQFLIDDGTCIDCGSCASVCPVGA 52 >gi|111027053|ref|YP_709031.1| polysulphide reductase [Rhodococcus jostii RHA1] gi|110825592|gb|ABH00873.1| probable polysulphide reductase [Rhodococcus jostii RHA1] Length = 509 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 C C CV++CP ++ ++ + + CI C C CP DA+ D Sbjct: 60 CNHCTDAPCVKICPTQALFKRDDGIVDFDNERCIGCKSCMQACPYDALYIDD 111 >gi|258622879|ref|ZP_05717895.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM573] gi|258625040|ref|ZP_05719961.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM603] gi|258582673|gb|EEW07501.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM603] gi|258584818|gb|EEW09551.1| formate dehydrogenase, iron-sulfur subunit [Vibrio mimicus VM573] Length = 199 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 50 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 109 Query: 64 ELWLKIN 70 K++ Sbjct: 110 GERGKMD 116 >gi|220925126|ref|YP_002500428.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949733|gb|ACL60125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 198 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C VCPV+CFY + + +H D CI CG C CP A + Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAPQY 104 >gi|163800919|ref|ZP_02194819.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. AND4] gi|159175268|gb|EDP60065.1| formate dehydrogenase, iron-sulfur subunit [Vibrio sp. AND4] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + P Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 + + + Sbjct: 110 QAFGE 114 >gi|254286426|ref|ZP_04961384.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae AM-19226] gi|150423593|gb|EDN15536.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae AM-19226] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|15641521|ref|NP_231153.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587191|ref|ZP_01676965.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 2740-80] gi|121726940|ref|ZP_01680141.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V52] gi|147675071|ref|YP_001217065.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|153214795|ref|ZP_01949624.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 1587] gi|153801187|ref|ZP_01955773.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-3] gi|153818524|ref|ZP_01971191.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae NCTC 8457] gi|153822821|ref|ZP_01975488.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae B33] gi|153824883|ref|ZP_01977550.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-2] gi|153829769|ref|ZP_01982436.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 623-39] gi|227081670|ref|YP_002810221.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae M66-2] gi|229508540|ref|ZP_04398043.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae BX 330286] gi|229511389|ref|ZP_04400868.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae B33] gi|229514918|ref|ZP_04404378.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TMA 21] gi|229518528|ref|ZP_04407971.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC9] gi|229520548|ref|ZP_04409972.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TM 11079-80] gi|229523595|ref|ZP_04413000.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae bv. albensis VL426] gi|229607945|ref|YP_002878593.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254226566|ref|ZP_04920148.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V51] gi|254848633|ref|ZP_05237983.1| formate dehydrogenase [Vibrio cholerae MO10] gi|255745047|ref|ZP_05418997.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholera CIRS 101] gi|261211641|ref|ZP_05925928.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC341] gi|262161666|ref|ZP_06030684.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae INDRE 91/1] gi|262169544|ref|ZP_06037235.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC27] gi|262190850|ref|ZP_06049070.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae CT 5369-93] gi|297579081|ref|ZP_06941009.1| formate dehydrogenase [Vibrio cholerae RC385] gi|9656016|gb|AAF94667.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548534|gb|EAX58588.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 2740-80] gi|121630702|gb|EAX63089.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V52] gi|124115137|gb|EAY33957.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 1587] gi|124123307|gb|EAY42050.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-3] gi|125620902|gb|EAZ49254.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae V51] gi|126510927|gb|EAZ73521.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae NCTC 8457] gi|126519680|gb|EAZ76903.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae B33] gi|146316954|gb|ABQ21493.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|148874748|gb|EDL72883.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae 623-39] gi|149741601|gb|EDM55631.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae MZO-2] gi|227009558|gb|ACP05770.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae M66-2] gi|227013426|gb|ACP09636.1| formate dehydrogenase, iron-sulfur subunit [Vibrio cholerae O395] gi|229337176|gb|EEO02193.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae bv. albensis VL426] gi|229342372|gb|EEO07366.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TM 11079-80] gi|229343217|gb|EEO08192.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC9] gi|229347623|gb|EEO12582.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae TMA 21] gi|229351354|gb|EEO16295.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae B33] gi|229354494|gb|EEO19417.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae BX 330286] gi|229370600|gb|ACQ61023.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae MJ-1236] gi|254844338|gb|EET22752.1| formate dehydrogenase [Vibrio cholerae MO10] gi|255737518|gb|EET92913.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholera CIRS 101] gi|260838991|gb|EEX65623.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio sp. RC341] gi|262021778|gb|EEY40488.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae RC27] gi|262028398|gb|EEY47053.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae INDRE 91/1] gi|262033269|gb|EEY51787.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio cholerae CT 5369-93] gi|297536675|gb|EFH75508.1| formate dehydrogenase [Vibrio cholerae RC385] Length = 202 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|291279714|ref|YP_003496549.1| formate dehydrogenase subunit beta [Deferribacter desulfuricans SSM1] gi|290754416|dbj|BAI80793.1| formate dehydrogenase, beta subunit [Deferribacter desulfuricans SSM1] Length = 195 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCPVD Y+ E+ + ++ D CI CG C CP A + Sbjct: 51 ISVACMHCSDAPCIAVCPVDALYQREDGIVLVNKDVCIGCGYCFFACPFGAPQF 104 >gi|238923605|ref|YP_002937121.1| Fe-hydrogenase large subunit family protein [Eubacterium rectale ATCC 33656] gi|238875280|gb|ACR74987.1| Fe-hydrogenase large subunit family protein [Eubacterium rectale ATCC 33656] Length = 530 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C+EVCP D I ++CI CG C C +AI P Sbjct: 140 VTDGCQGCLAHPCMEVCPKDAVSLDRTTGKSVIDQEKCIKCGRCASVCSYNAIIVQERP 198 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 15/64 (23%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C + C +D EN A I D+C+ CG C CP Sbjct: 175 EKCIKCGRCASVCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCP 234 Query: 52 VDAI 55 AI Sbjct: 235 FGAI 238 >gi|257066578|ref|YP_003152834.1| NADH dehydrogenase (quinone) [Anaerococcus prevotii DSM 20548] gi|256798458|gb|ACV29113.1| NADH dehydrogenase (quinone) [Anaerococcus prevotii DSM 20548] Length = 526 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y + E+CI C C +CP + E I+ D+CI CG C+ CP++AI Sbjct: 472 YTIGEDCIGCG--KCKRLCPNEAIAGEARKKHEINQDKCIKCGQCKDNCPINAI 523 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 ++CI CG C+ CP +AI + E Sbjct: 476 EDCIGCGKCKRLCPNEAIAGEARKKHE 502 >gi|220931476|ref|YP_002508384.1| NADH dehydrogenase (ubiquinone) 51 kDa subunit [Halothermothrix orenii H 168] gi|219992786|gb|ACL69389.1| NADH dehydrogenase (ubiquinone) 51 kDa subunit [Halothermothrix orenii H 168] Length = 594 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C C C +VCPVD + E I D+CI CG C +CP +A++ Sbjct: 541 IIAEECRNCGL--CAKVCPVDAITKEEEAHVIDLDKCIKCGSCLDKCPFNAVQ 591 Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CP I +EC +CG+C CPVDAI + E Sbjct: 528 CPAGS-CRNLTRYKIIAEECRNCGLCAKVCPVDAITKEEEA 567 >gi|219670089|ref|YP_002460524.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540349|gb|ACL22088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 56 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ CI C C CPV G++ I D C DCG C CP A P Sbjct: 1 MAYVINSECISCG--ACEAECPVGAISAGDDLYVIDADTCTDCGSCAGVCPTGAPNP 55 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 15/29 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ECI CG CE ECPV AI + Sbjct: 1 MAYVINSECISCGACEAECPVGAISAGDD 29 >gi|330828778|ref|YP_004391730.1| formate dehydrogenase iron-sulfur subunit [Aeromonas veronii B565] gi|328803914|gb|AEB49113.1| Formate dehydrogenase iron-sulfur subunit [Aeromonas veronii B565] Length = 219 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYHTDDGIVLHNKDLCIGCGYCLFACPFGAPQFPKTAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GDRGKMD 119 >gi|257065141|ref|YP_003144813.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] gi|256792794|gb|ACV23464.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] Length = 209 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY V+ C C CVE CPV +E + P+ CI CG C CP A + DT Sbjct: 60 TYYVSSACNHCATPACVEACPVGTMTKHEDTGLVYNDPETCIGCGSCVNACPYGAPQVDT 119 Query: 60 E 60 E Sbjct: 120 E 120 >gi|221636035|ref|YP_002523911.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomicrobium roseum DSM 5159] gi|221157849|gb|ACM06967.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermomicrobium roseum DSM 5159] Length = 510 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C CV +CP + + + D CI C C CP DA+ D Sbjct: 58 CNHCDDAPCVTICPTKALFRRPDGIVDFDADRCIGCKSCMQACPYDALYID 108 >gi|212637700|ref|YP_002314225.1| formate dehydrogenase, iron-sulfur subunit [Shewanella piezotolerans WP3] gi|212559184|gb|ACJ31638.1| Formate dehydrogenase, iron-sulfur subunit [Shewanella piezotolerans WP3] Length = 189 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C+ VCP +CFY+ E+ + +H D CI CG C CP A + Sbjct: 53 ISIACMHCSDAPCMAVCPANCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQF 106 >gi|257439152|ref|ZP_05614907.1| Fe-hydrogenase large subunit family protein [Faecalibacterium prausnitzii A2-165] gi|257198403|gb|EEU96687.1| Fe-hydrogenase large subunit family protein [Faecalibacterium prausnitzii A2-165] Length = 528 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I ++CI CG C CP +AI P Sbjct: 132 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQEKCIKCGRCATVCPYNAIVKTERP 188 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 21/107 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDE----------CIDCGVCEPE 49 E CI C C VCP + + E AIH DE C+ CG C Sbjct: 165 EKCIKCG--RCATVCPYNAIVKTERPCAAACGMGAIHSDELGRAEIDYSKCVSCGQCLVN 222 Query: 50 CPVDAIKPDTEPGL--ELWLKINSEYATQWPNITTKKESLPSAAKMD 94 CP AI + + + + + YA P + SL SA K+ Sbjct: 223 CPFGAIADKGQIYQLIQGFNRGDRIYALVAPAFVNQFPSLASAGKLK 269 >gi|315651987|ref|ZP_07904989.1| ferredoxin [Eubacterium saburreum DSM 3986] gi|315485816|gb|EFU76196.1| ferredoxin [Eubacterium saburreum DSM 3986] Length = 55 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV +G+ I D CIDCG C CP +AI Sbjct: 1 MAYTITDKCVSCG--TCEGECPVSAISQGDTQYNIDADACIDCGTCASVCPTEAI 53 >gi|163841886|ref|YP_001626291.1| ferredoxin--NADP reductase [Renibacterium salmoninarum ATCC 33209] gi|162955362|gb|ABY24877.1| ferredoxin--NADP reductase [Renibacterium salmoninarum ATCC 33209] Length = 472 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKP---DTEPGLELWLKINSEYATQWPNITTKKESLP 88 L I P CID G C CPVDAI P + + KIN++Y + + P Sbjct: 1 MLYIDPKSCIDFGACVDACPVDAIFPIESLLAGPKKAYPKINADYFDAKADPAENVDPAP 60 Query: 89 SAAKMD 94 + + Sbjct: 61 NFHTWN 66 >gi|119988|sp|P00198|FER_CLOAC RecName: Full=Ferredoxin gi|157831050|pdb|1FDN|A Chain A, Refined Crystal Structure Of The 2[4fe-4s] Ferredoxin From Clostridium Acidurici At 1.84 Angstroms Resolution gi|157834957|pdb|2FDN|A Chain A, 2[4fe-4s] Ferredoxin From Clostridium Acidi-Urici Length = 55 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E CI C C CPV+ G++ I D CIDCG C CPVDA Sbjct: 1 AYVINEACISCG--ACEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDAP 52 Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 + + CI CG CEPECPV+AI + Sbjct: 2 YVINEACISCGACEPECPVNAISSGDD 28 >gi|308051293|ref|YP_003914859.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307633483|gb|ADN77785.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 193 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 10/88 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + + + H D+CI CG C CP A Sbjct: 54 ISVACMHCSDAPCMAVCPADCFEQTADGIIRHSKDKCIGCGYCLYACPFGAP-------- 105 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAA 91 + K + A + T P A Sbjct: 106 -QFPKQTAFGARGKMDKCTFCAGGPDAE 132 >gi|325474291|gb|EGC77479.1| ferredoxin [Treponema denticola F0402] Length = 58 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ C C C CPV+ E I D CI CG C CPV+AI + Sbjct: 3 MAYKISNECTNC--AACESECPVNAISEAGGKHVIDADTCISCGACAGVCPVEAISEE 58 >gi|168180426|ref|ZP_02615090.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum NCTC 2916] gi|226949092|ref|YP_002804183.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A2 str. Kyoto] gi|182668703|gb|EDT80681.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum NCTC 2916] gi|226842684|gb|ACO85350.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A2 str. Kyoto] Length = 631 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|251779851|ref|ZP_04822771.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084166|gb|EES50056.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 646 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 219 TITKKCIGCG--SCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 +CI CG C+ CPVD I D E + + N Sbjct: 223 KCIGCGSCKRACPVDCI--DGELKKQHNIDYN 252 Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL 33 C C C+ CPVD G N + Sbjct: 254 CTHCG--ACISACPVDAITAGNNII 276 >gi|297584891|ref|YP_003700671.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297143348|gb|ADI00106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 230 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C H CV CPV Y+ E+ L +H D CI C C CP I + + + W Sbjct: 60 CNHCDHAPCVMACPVTAMYKDEDGLTLHDADRCIGCKACMTACPYGVISFNKKDPHQYWN 119 Query: 68 KINS 71 + N+ Sbjct: 120 ENNA 123 >gi|168184520|ref|ZP_02619184.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Bf] gi|237795252|ref|YP_002862804.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum Ba4 str. 657] gi|182672370|gb|EDT84331.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Bf] gi|229262705|gb|ACQ53738.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum Ba4 str. 657] Length = 631 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|157377546|ref|YP_001476146.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319920|gb|ABV39018.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 189 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 10/97 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAP-------- 104 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + K + + + T P D +QKY Sbjct: 105 -QFPKKGAFGSRGKMDKCTFCAGGPEENHSDAERQKY 140 >gi|127510999|ref|YP_001092196.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636294|gb|ABO21937.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 189 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 10/97 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAP-------- 104 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 + K + + + T P D +QKY Sbjct: 105 -QFPKKGAFGSRGKMDKCTFCAGGPEENHSDAERQKY 140 >gi|83950408|ref|ZP_00959141.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83838307|gb|EAP77603.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 672 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 7/66 (10%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV TE C + T C+++CP + + I P C CG C CP AI Sbjct: 284 YVRTEPLLCAHSRAEQTGCTRCLDLCPTGAITPDGDHVTIDPMVCAGCGACSAACPSGAI 343 Query: 56 KPDTEP 61 D P Sbjct: 344 SYDAPP 349 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V T+ C LC CV +CP + + L D C+ CG+C CP DAI + Sbjct: 520 VDTDACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANICPEDAITYEPRL 577 Query: 62 GL 63 L Sbjct: 578 DL 579 Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 14/51 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---------FLAIHPDE---CIDCGV 45 + C+ C C +CP D ++ +E CIDCG Sbjct: 554 DACLQCGL--CANICPEDAITYEPRLDLTDAALSQTVLNEEEPFACIDCGA 602 >gi|331002353|ref|ZP_08325871.1| ferredoxin [Lachnospiraceae oral taxon 107 str. F0167] gi|330410169|gb|EGG89603.1| ferredoxin [Lachnospiraceae oral taxon 107 str. F0167] Length = 55 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV +G+ I D CIDCG C CP DAI Sbjct: 1 MAYTITDKCVSCG--TCEGECPVSAISQGDTQFNIDADACIDCGTCASVCPTDAI 53 >gi|188589939|ref|YP_001920992.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43] gi|188500220|gb|ACD53356.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43] Length = 646 Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C CPVDC E + I ++C CG C CPVDAI Sbjct: 219 TITKKCIGCG--SCKRACPVDCIDGELKKQHNIDYNKCTHCGACISACPVDAI 269 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 +CI CG C+ CPVD I D E + + N Sbjct: 223 KCIGCGSCKRACPVDCI--DGELKKQHNIDYN 252 Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL 33 C C C+ CPVD G N + Sbjct: 254 CTHCG--ACISACPVDAITAGNNII 276 >gi|224536879|ref|ZP_03677418.1| hypothetical protein BACCELL_01755 [Bacteroides cellulosilyticus DSM 14838] gi|224521503|gb|EEF90608.1| hypothetical protein BACCELL_01755 [Bacteroides cellulosilyticus DSM 14838] Length = 56 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ ++C+ C C++ CPV EG + AI P+ C DCG C CP +AI P Sbjct: 1 MAYVINDSCVACG--TCIDECPVGAISEG-DIYAIDPETCTDCGTCADVCPSEAIHP 54 >gi|170729126|ref|YP_001763152.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814473|gb|ACA89057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 189 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAPQFPKKGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GSRGKMD 119 >gi|330445947|ref|ZP_08309599.1| formate dehydrogenase iron-sulfur subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490138|dbj|GAA04096.1| formate dehydrogenase iron-sulfur subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 205 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + H D CI CG C CP A + P Sbjct: 53 ISVACMHCSDAPCMAVCPADCFSHTEDGIVQHNKDLCIGCGYCLFACPFGAPQF---PKQ 109 Query: 64 ELWLK 68 E + + Sbjct: 110 EAFAE 114 >gi|303241043|ref|ZP_07327553.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetivibrio cellulolyticus CD2] gi|302591468|gb|EFL61206.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetivibrio cellulolyticus CD2] Length = 56 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +TE CI C C CPV C G++ I CI+CG C CPVDA K Sbjct: 1 MAYFITEACISCG--ACEPECPVSCISAGDSSYVIDESACIECGACANVCPVDAPKQ 55 >gi|288931637|ref|YP_003435697.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893885|gb|ADC65422.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 235 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y V + C+ C+ CV+VCPV+ + ++ I D CI C C CP A E Sbjct: 103 AYFVPKLCMHCEKPPCVKVCPVNATWLTDDGFVLIDEDHCIGCKYCIQACPYGARYFHEE 162 >gi|153941131|ref|YP_001391108.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum F str. Langeland] gi|152937027|gb|ABS42525.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum F str. Langeland] gi|295319154|gb|ADF99531.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum F str. 230613] Length = 631 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|225572042|ref|ZP_03780906.1| hypothetical protein RUMHYD_00336 [Blautia hydrogenotrophica DSM 10507] gi|225040477|gb|EEG50723.1| hypothetical protein RUMHYD_00336 [Blautia hydrogenotrophica DSM 10507] Length = 501 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ C C C+ +CP + + I +CI CG C+ CP DAI T P Sbjct: 115 YEVSNICKGCVAHPCMLICPKGAISMVDGYSHIDQTKCIKCGKCKSVCPYDAISHKTRP 173 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-----------------FLAIHPDECIDCG 44 +++ CI C C VCP D I D+C+ CG Sbjct: 145 SHIDQTKCIKCG--KCKSVCPYDAISHKTRPCERACGVNAITSDQQGRATILNDKCVSCG 202 Query: 45 VCEPECPVDAIKP 57 +C CP AI Sbjct: 203 MCMVSCPFGAISD 215 >gi|224371231|ref|YP_002605395.1| ferredoxin (iron-sulfur cluster-binding protein) [Desulfobacterium autotrophicum HRM2] gi|223693948|gb|ACN17231.1| ferredoxin (iron-sulfur cluster-binding protein) [Desulfobacterium autotrophicum HRM2] Length = 384 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C CV+ CPV ++ I+P+ CI CG C CP ++ + ++L+ Sbjct: 196 CIGCG--ACVDNCPVKAITLEDDKATINPEVCIGCGECIIRCPTGSVNIRWNQTIPVFLE 253 Query: 69 INSEYATQWPNITTKKE 85 EY I+ K++ Sbjct: 254 KMMEYTKG--VISGKED 268 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 39 ECIDCGVCEPECPVDAIKPDTE 60 CI CG C CPV AI + + Sbjct: 195 TCIGCGACVDNCPVKAITLEDD 216 >gi|255527286|ref|ZP_05394166.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296188356|ref|ZP_06856748.1| ferredoxin [Clostridium carboxidivorans P7] gi|255509024|gb|EET85384.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296047482|gb|EFG86924.1| ferredoxin [Clostridium carboxidivorans P7] Length = 56 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + ++C+ C C CPV+ +G++ I CIDCG C CPV A + Sbjct: 1 MAYKIEDSCVSCG--TCASECPVNAISQGDSIFVIDESTCIDCGNCANVCPVGAPVQE 56 >gi|291515570|emb|CBK64780.1| 4Fe-4S binding domain [Alistipes shahii WAL 8301] Length = 55 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T++C+ C C+ CPV+ G + I D+CIDCG C CP +AI + Sbjct: 1 MAYKITDSCVACG--SCIGECPVEAISAG-DIYVIDADKCIDCGTCAGVCPSEAIVSE 55 >gi|121535200|ref|ZP_01667015.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306191|gb|EAX47118.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 356 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+T+NC C C++ CP + E + I ++CI CG C C DA+K D Sbjct: 191 VLTDNCRFC--QKCLKWCPQEAIIEKDGKAYIMTEKCIGCGECLAVCRFDAVKYD 243 >gi|170759324|ref|YP_001787173.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A3 str. Loch Maree] gi|169406313|gb|ACA54724.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A3 str. Loch Maree] Length = 631 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|152979186|ref|YP_001344815.1| dimethylsulfoxide reductase chain B [Actinobacillus succinogenes 130Z] gi|150840909|gb|ABR74880.1| Dimethylsulfoxide reductase chain B [Actinobacillus succinogenes 130Z] Length = 205 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C CV+VCP ++ E I + + CI C C CP DA + D + Sbjct: 60 AYYMSVSCNHCDDPACVKVCPTGAMHKNEEGFVIVNEETCIGCRYCHMACPYDAPQFDAK 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|99080237|ref|YP_612391.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99036517|gb|ABF63129.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 652 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++ CP + +AI P C CG C CP AI D P L+L+I Sbjct: 277 RQTGCTRCLDACPTGAITPNGDSVAIDPMICAGCGACASLCPSGAITYDAPPTESLFLRI 336 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + E+ L D C+ CG+C CP DAI Sbjct: 499 VDTDACTLCL--SCVSLCPSGALGDNEDLPQLRFQEDACLQCGLCANACPEDAI 550 >gi|298528233|ref|ZP_07015637.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511885|gb|EFI35787.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 643 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V+++C +C +CV VCP + GE I +C CG+C +CP AI EP E Sbjct: 474 VSQDCAVCL--NCVLVCPYNVPRPGEEKAVIDMSQCQACGICAGQCPAAAIDLGLEPRTE 531 Query: 65 L 65 L Sbjct: 532 L 532 >gi|253702471|ref|YP_003023660.1| Fis family transcriptional regulator [Geobacter sp. M21] gi|251777321|gb|ACT19902.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. M21] Length = 759 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T++C C CV CPV +++ I P+ CI CG C CP A Sbjct: 6 TITDHCRKC--YSCVRSCPVKAIKVEKSYTEIIPERCIGCGNCMSHCPQHA 54 >gi|149191930|ref|ZP_01870162.1| formate dehydrogenase, iron-sulfur subunit [Vibrio shilonii AK1] gi|148834235|gb|EDL51240.1| formate dehydrogenase, iron-sulfur subunit [Vibrio shilonii AK1] Length = 202 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|310642487|ref|YP_003947245.1| glutamate synthase family, small subunit, putative [Paenibacillus polymyxa SC2] gi|309247437|gb|ADO57004.1| Glutamate synthase family, small subunit, putative [Paenibacillus polymyxa SC2] Length = 209 Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TYV + C C++ C CPV + + + I D CI C C CP AI+ Sbjct: 79 TYVPVQ-CRHCENAPCAHACPVQAIRQEDGVVMIDEDRCIGCTSCVLACPFGAIE 132 >gi|127510995|ref|YP_001092192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636290|gb|ABO21933.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 196 Score = 63.6 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCP +CFY+ E+ L +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAPQF 106 >gi|312878987|ref|ZP_07738787.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] gi|310782278|gb|EFQ22676.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] Length = 597 Score = 63.6 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C VCPV+ E + I ++C+ CG C CPV AI Sbjct: 549 CIGC--TKCARVCPVNAITGEIKKPHVIDAEKCVKCGACAEACPVKAI 594 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C CV + I P +CI C C CPV+AI + + Sbjct: 530 KCPAGACVALT----------SFVIDPAKCIGCTKCARVCPVNAITGEIKKPH 572 >gi|257467682|ref|ZP_05631778.1| putative [Fe] hydrogenase, electron-transfer subunit [Fusobacterium ulcerans ATCC 49185] gi|317061976|ref|ZP_07926461.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium ulcerans ATCC 49185] gi|313687652|gb|EFS24487.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium ulcerans ATCC 49185] Length = 594 Score = 63.6 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 TY +T+ CI C T C VCP+D I + CI CG C C AI Sbjct: 539 TYSITDKCIGC--TACARVCPIDAITGTVKHRHEIDNEICIKCGACYETCKFGAI 591 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 17/32 (53%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 D+CI C C CP+DAI + E+ +I Sbjct: 544 DKCIGCTACARVCPIDAITGTVKHRHEIDNEI 575 >gi|295100394|emb|CBK97939.1| Iron only hydrogenase large subunit, C-terminal domain [Faecalibacterium prausnitzii L2-6] Length = 517 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V++ C C C+EVCP I ++CI CG C CP +AI P Sbjct: 121 VSDLCQGCLAHPCMEVCPKKAITWESGRSTIDQEKCIKCGRCVGVCPYNAIVKTERP 177 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDE----------CIDCGVCEPE 49 E CI C CV VCP + + E AIH DE C+ CG C Sbjct: 154 EKCIKCG--RCVGVCPYNAIVKTERPCAAACGMGAIHSDELGRAEIDYSKCVSCGQCLVN 211 Query: 50 CPVDAI 55 CP AI Sbjct: 212 CPFGAI 217 >gi|117619514|ref|YP_857564.1| formate dehydrogenase iron-sulfur subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560921|gb|ABK37869.1| formate dehydrogenase iron-sulfur subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 207 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCFY ++ + +H D CI CG C CP A + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFYHTDDGIVLHNKDLCIGCGYCLFACPFGAPQFPKTAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GDRGKMD 119 >gi|291528206|emb|CBK93792.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium rectale M104/1] Length = 507 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C+EVCP D I ++CI CG C C +AI P Sbjct: 117 VTDGCQGCLAHPCMEVCPKDAVSLDRTTGKSVIDQEKCIKCGRCASVCSYNAIIVQERP 175 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 15/64 (23%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C + C +D EN A I D+C+ CG C CP Sbjct: 152 EKCIKCGRCASVCSYNAIIVQERPCAKACGMDAISSDENGKANIDYDKCVSCGQCLVNCP 211 Query: 52 VDAI 55 AI Sbjct: 212 FGAI 215 >gi|187779551|ref|ZP_02996024.1| hypothetical protein CLOSPO_03147 [Clostridium sporogenes ATCC 15579] gi|187773176|gb|EDU36978.1| hypothetical protein CLOSPO_03147 [Clostridium sporogenes ATCC 15579] Length = 631 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|332880702|ref|ZP_08448375.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681336|gb|EGJ54260.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 480 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y VT C C C CP D + + E I ++CI CG C CP AI Sbjct: 115 YEVTNLCRGCAARPCYNNCPKDAIHYDSEGKAYIDHEKCISCGRCHQVCPYHAIVY 170 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 Y+ E CI C C E CPV + E + I P++CI CG C Sbjct: 146 AYIDHEKCISCGRCHQVCPYHAIVYIPVPCEEACPVKAISKDEYGVEHIDPEKCIYCGKC 205 Query: 47 EPECPVDAIKP 57 CP AI Sbjct: 206 LNACPFGAIFD 216 >gi|255654361|ref|ZP_05399770.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-23m63] gi|296452648|ref|ZP_06894341.1| iron-sulfur cluster-binding protein [Clostridium difficile NAP08] gi|296880940|ref|ZP_06904887.1| iron-sulfur cluster-binding protein [Clostridium difficile NAP07] gi|296258529|gb|EFH05431.1| iron-sulfur cluster-binding protein [Clostridium difficile NAP08] gi|296428053|gb|EFH13953.1| iron-sulfur cluster-binding protein [Clostridium difficile NAP07] Length = 357 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C CV CP + I D C CG C CP A+ E +++++ Sbjct: 197 CIGCG--KCVNSCPTKAISIVDKKAVIDSDVCYGCGECPTVCPTRAVTIQWESDSDVFVE 254 Query: 69 INSEYA 74 +EYA Sbjct: 255 KMAEYA 260 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 + +CI CG C CP AI Sbjct: 191 VVKEKKCIGCGKCVNSCPTKAI 212 >gi|182415488|ref|YP_001820554.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Opitutus terrae PB90-1] gi|177842702|gb|ACB76954.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Opitutus terrae PB90-1] Length = 665 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y+ E C CK C+ +CP E + +I+ C CG C CP +I + Sbjct: 592 AYIAAEECSGCK--SCIGLCPYTAITFDETKQVASINAALCKGCGTCVAACPSGSIHQNL 649 Query: 60 EPGLELWLKI 69 +++ +I Sbjct: 650 FEDQQVFSEI 659 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 3/50 (6%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 + N I +EC C C CP AI D + IN+ Sbjct: 585 IEQEPNTAYIAAEECSGCKSCIGLCPYTAITFD---ETKQVASINAALCK 631 >gi|304382205|ref|ZP_07364713.1| ferredoxin [Prevotella marshii DSM 16973] gi|304336670|gb|EFM02898.1| ferredoxin [Prevotella marshii DSM 16973] Length = 55 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +C+ C C++ CPV EGE +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGNDCVACG--TCIDECPVSAISEGE-IYSINPDACTECGACAAVCPSEAI 52 >gi|310778492|ref|YP_003966825.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] gi|309747815|gb|ADO82477.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] Length = 598 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +T+ CI C T C +VCP + + I+ D CI CG C C +AIK Sbjct: 544 FTITDKCIGC--TACAKVCPTEAILGRVKEKHYIYQDRCIKCGACYNACRFNAIK 596 >gi|310828304|ref|YP_003960661.1| hypothetical protein ELI_2717 [Eubacterium limosum KIST612] gi|308740038|gb|ADO37698.1| hypothetical protein ELI_2717 [Eubacterium limosum KIST612] Length = 375 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V+ + C CK C ++C ++ I D+C+ CG C CP DAI P Sbjct: 190 PHVIEKKCRDCKV--CKDICAMNAISY-PEKAVIDHDKCVGCGRCIGICPFDAI---ATP 243 Query: 62 GLELWLKINSEYAT 75 E + +N + A Sbjct: 244 NDESFDVLNKKMAE 257 >gi|330996166|ref|ZP_08320056.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] gi|329573670|gb|EGG55261.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] Length = 480 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y VT C C C CP D + + E I ++CI CG C CP AI Sbjct: 115 YEVTNLCRGCAARPCYNNCPKDAIHYDSEGKAYIDHEKCISCGRCHQVCPYHAIVY 170 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 Y+ E CI C C E CPV + E + I P++CI CG C Sbjct: 146 AYIDHEKCISCGRCHQVCPYHAIVYIPVPCEEACPVKAISKDEYGVEHIDPEKCIYCGKC 205 Query: 47 EPECPVDAIKP 57 CP AI Sbjct: 206 LNACPFGAIFD 216 >gi|330997493|ref|ZP_08321342.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] gi|329570524|gb|EGG52248.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] Length = 54 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++C+ C C++ CPV EGE I+ D C +CG C CP AI Sbjct: 1 MAYVIGDDCVACG--TCIDECPVGAISEGE-KYVINADACTECGTCADVCPSGAI 52 >gi|313887884|ref|ZP_07821563.1| ferredoxin [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846050|gb|EFR33432.1| ferredoxin [Peptoniphilus harei ACS-146-V-Sch2b] Length = 56 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M YV+ ++CI C C CPV C EG + +I +CIDCG C CPV A P+ Sbjct: 1 MAYVINDSCIACG--ACQPECPVGCISEG-DIYSIDESQCIDCGSCAAVCPVGAPNPED 56 >gi|260768419|ref|ZP_05877353.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio furnissii CIP 102972] gi|260616449|gb|EEX41634.1| formate dehydrogenase-O iron-sulfur subunit [Vibrio furnissii CIP 102972] gi|315180130|gb|ADT87044.1| formate dehydrogenase, iron-sulfur subunit [Vibrio furnissii NCTC 11218] Length = 202 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQSAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|315651089|ref|ZP_07904123.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315486679|gb|EFU77027.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 207 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++CI C CVEVCP DC + I C+ CG C C V A+ Sbjct: 154 YFITDDCIGCG--RCVEVCPQDCINQENIPYVIENKHCLHCGNCLTVCSVGAV 204 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEP 61 D+CI CG C CP D I + P Sbjct: 154 YFITDDCIGCGRCVEVCPQDCINQENIP 181 >gi|160893574|ref|ZP_02074358.1| hypothetical protein CLOL250_01128 [Clostridium sp. L2-50] gi|163814830|ref|ZP_02206218.1| hypothetical protein COPEUT_00980 [Coprococcus eutactus ATCC 27759] gi|156864559|gb|EDO57990.1| hypothetical protein CLOL250_01128 [Clostridium sp. L2-50] gi|158449769|gb|EDP26764.1| hypothetical protein COPEUT_00980 [Coprococcus eutactus ATCC 27759] Length = 56 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ ++CI C C CPV + I +CI CG C CPV I + Sbjct: 1 MAFVIGDSCIGCG--SCAGSCPVGAISDNGGVFVIDGSQCISCGACAGSCPVGTISEE 56 >gi|148379808|ref|YP_001254349.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 3502] gi|153931627|ref|YP_001384106.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 19397] gi|153936195|ref|YP_001387646.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum A str. Hall] gi|148289292|emb|CAL83388.1| putative electron-transferring subunit of iron-only hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152927671|gb|ABS33171.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A str. ATCC 19397] gi|152932109|gb|ABS37608.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum A str. Hall] Length = 631 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|160935281|ref|ZP_02082663.1| hypothetical protein CLOBOL_00176 [Clostridium bolteae ATCC BAA-613] gi|158441639|gb|EDP19339.1| hypothetical protein CLOBOL_00176 [Clostridium bolteae ATCC BAA-613] Length = 507 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C EVCP D I+ D+CI CG C C AI P Sbjct: 116 FVTDGCQGCLAHPCEEVCPKDAIKLDRTNGRSHINDDKCIKCGRCADVCSYKAIIIQERP 175 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 +++ + CI C C C +D EN A I D+C+ CG+C Sbjct: 147 SHINDDKCIKCGRCADVCSYKAIIIQERPCAAACGMDAISTDENGKADIDYDKCVSCGMC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|301061526|ref|ZP_07202288.1| anaerobic dimethyl sulfoxide reductase chain B family protein [delta proteobacterium NaphS2] gi|300444334|gb|EFK08337.1| anaerobic dimethyl sulfoxide reductase chain B family protein [delta proteobacterium NaphS2] Length = 149 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C C EVCP + Y+ ++ + + PD+CI CG C ECP AI D E G Sbjct: 59 CRHCDDPPCAEVCPEEIIYKRDDGIVVLDPDKCIGCGSCIDECPYGAIVFDHENG 113 >gi|170754983|ref|YP_001781396.1| putative [Fe] hydrogenase, electron-transfer subunit [Clostridium botulinum B1 str. Okra] gi|169120195|gb|ACA44031.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum B1 str. Okra] Length = 631 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSACPVGAI 628 >gi|114763310|ref|ZP_01442734.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114544108|gb|EAU47118.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 638 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV TE C + T C+++CP + +++ P C CG C CP AI Sbjct: 251 YVRTEPLLCAHSRAGQVGCTSCLDLCPTGAISPDGDHVSVDPMICAGCGACSSACPSGAI 310 Query: 56 KPDTEPGLELW 66 D P + Sbjct: 311 SYDAPPVDLTF 321 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 V + C LC CV +CP + + L D C+ CG+C CP DAI + Sbjct: 487 VDQDACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAIAYE 541 >gi|54309047|ref|YP_130067.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum SS9] gi|46913479|emb|CAG20265.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum SS9] Length = 205 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + E Sbjct: 53 ISVACMHCSDAPCMAVCPADCFEQTEDGIVRHDKDLCIGCGYCLFACPFGAPQFPKEDAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|110802004|ref|YP_699826.1| [Fe] hydrogenase [Clostridium perfringens SM101] gi|110682505|gb|ABG85875.1| [Fe] hydrogenase [Clostridium perfringens SM101] Length = 490 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C + I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFEAINFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|90413855|ref|ZP_01221842.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum 3TCK] gi|90325166|gb|EAS41669.1| putative formate dehydrogenase, iron-sulfur subunit [Photobacterium profundum 3TCK] Length = 205 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + E+ + H D CI CG C CP A + E Sbjct: 53 ISVACMHCSDAPCMAVCPADCFEQTEDGIVRHDKDLCIGCGYCLFACPFGAPQFPKEDAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|298498401|ref|ZP_07008208.1| formate dehydrogenase [Vibrio cholerae MAK 757] gi|297542734|gb|EFH78784.1| formate dehydrogenase [Vibrio cholerae MAK 757] Length = 202 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTEDGIVLHNKDLCIGCGYCLFACPFGAPQIPKQAAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|223041221|ref|ZP_03611471.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] gi|222877513|gb|EEF12644.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] Length = 213 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C+ C+ C VCPVDCFY + + +H D CI CG C CP A + +E Sbjct: 61 ACMHCEDAPCSLVCPVDCFYIRADGVVLHDKDICIGCGYCLYACPFGAPQFPSE 114 >gi|187251160|ref|YP_001875642.1| hydrogenase large subunit domain-containing protein [Elusimicrobium minutum Pei191] gi|186971320|gb|ACC98305.1| Hydrogenase large subunit domain protein [Elusimicrobium minutum Pei191] Length = 482 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C C +VCP + ++ E I +C++CG+C CP AI P Sbjct: 91 YEVTAACRGCIAHRCEQVCPKNAISFDHEQKAHIDKTKCVECGLCAKVCPFSAILSYKRP 150 Query: 62 GLELWLKINS 71 + +N+ Sbjct: 151 CEKACKVVNA 160 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 20/72 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF------YEGENFLA------------IHPDECIDC 43 ++ C+ C C +VCP E + I +C+ C Sbjct: 122 AHIDKTKCVECGL--CAKVCPFSAILSYKRPCEKACKVVNAISMNSTKEAKIDDKKCVSC 179 Query: 44 GVCEPECPVDAI 55 G C +CP AI Sbjct: 180 GACINQCPFGAI 191 >gi|119989|sp|P00196|FER_CLOBU RecName: Full=Ferredoxin Length = 55 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+ ++C+ C C CPV +G+ I D CIDCG C CPV A + Sbjct: 1 AFVINDSCVSCG--ACAGECPVSAITQGDTQFVIDADTCIDCGNCANVCPVGAPNQE 55 >gi|325972699|ref|YP_004248890.1| hydrogenase large subunit domain protein [Spirochaeta sp. Buddy] gi|324027937|gb|ADY14696.1| hydrogenase large subunit domain protein [Spirochaeta sp. Buddy] Length = 486 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++++ C C C+ CP DC I CI CG C+ CP A+ Sbjct: 113 YLISDACRGCFARPCLANCPKDCITFSGGQAHIDESRCIRCGKCKEVCPFHAV 165 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFY-EGENFLAIHPDECIDCGVC 46 ++ CI C C E CPV+ E ++ I CI CG C Sbjct: 143 AHIDESRCIRCGKCKEVCPFHAVVHIPVPCEEACPVNAVKKNAEGYVEIDYKLCISCGRC 202 Query: 47 EPECPVDAI 55 CP AI Sbjct: 203 AMSCPFGAI 211 >gi|296272270|ref|YP_003654901.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096445|gb|ADG92395.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 186 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C C C VCPV G++ + +H + CI C +C CP AI+P+ E Sbjct: 51 TVPNICRQCDDAPCANVCPVGALEFGKDSILVHEELCIGCKMCTLVCPFGAIRPEAE 107 >gi|320535768|ref|ZP_08035850.1| ferredoxin [Treponema phagedenis F0421] gi|320147378|gb|EFW38912.1| ferredoxin [Treponema phagedenis F0421] Length = 56 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++E CI C C CPV+ E + I CI CG C CP AI + Sbjct: 1 MAYKISEECINCG--ACKSECPVNAISEQTDMHVIDAGLCISCGACAEVCPAQAISEE 56 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +ECI+CG C+ ECPV+AI T+ Sbjct: 1 MAYKISEECINCGACKSECPVNAISEQTD 29 >gi|254517630|ref|ZP_05129686.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] gi|226911379|gb|EEH96580.1| ferredoxin hydrogenase [Clostridium sp. 7_2_43FAA] Length = 496 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT++C C C E C I+ + C +CG+C+ CP DAI P Sbjct: 105 YSVTDSCRNCLAHKCHEACNFGAITYVAGRAYINQELCKECGMCKKACPYDAIAEVMRP 163 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 16/72 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDC--FYEGENFLAIHPDECIDCGV 45 Y+ E C C C VCP + + I + C++CG Sbjct: 135 AYINQELCKECGMCKKACPYDAIAEVMRPCKRVCPTGALDINQDDRRAMIKEETCVNCGS 194 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 195 CMSACPFGAISD 206 >gi|283853706|ref|ZP_06370936.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283570916|gb|EFC18946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 378 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + CI C +CV VCPV + AI CI CG C CP A+ D + Sbjct: 199 VDAKKCIGCG--ECVAVCPVGAATMADRKAAIDKSSCIGCGECLTVCPKKAMSIDWHTEI 256 Query: 64 ELWLKINSEYA 74 +++ EYA Sbjct: 257 VPFMERMVEYA 267 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDA 54 A+ +CI CG C CPV A Sbjct: 197 FAVDAKKCIGCGECVAVCPVGA 218 >gi|238750629|ref|ZP_04612129.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] gi|238711277|gb|EEQ03495.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] Length = 205 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D E Sbjct: 60 AYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|301064440|ref|ZP_07204859.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441450|gb|EFK05796.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 235 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V TE CI C+ C+E C ++ ++ I+ D CI CG+C CP DA+ + P Sbjct: 139 ARVDTETCIGCE--TCLERCQMEALRMEDDHAVINRDRCIGCGLCVSTCPSDALHMERRP 196 Query: 62 GL 63 G Sbjct: 197 GE 198 >gi|237752044|ref|ZP_04582524.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter winghamensis ATCC BAA-430] gi|229376611|gb|EEO26702.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter winghamensis ATCC BAA-430] Length = 209 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 63 VSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGAPQFPKNGVF 122 Query: 64 ELWLKIN 70 E ++ Sbjct: 123 ESRGAMD 129 >gi|163740593|ref|ZP_02147987.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386451|gb|EDQ10826.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] Length = 629 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV TE C + T C+++CP + ++I P C CG C CP AI Sbjct: 240 YVRTEPLLCAHSRAGQTGCTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 299 Query: 56 KPDTEPGLELWLKI 69 D P L +I Sbjct: 300 TYDAPPTDALMRRI 313 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V ++NC LC CV +CP + + L D C+ CG+C CP DAI ++ Sbjct: 476 VSSDNCTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITYESRL 533 Query: 62 GL 63 L Sbjct: 534 NL 535 >gi|254517435|ref|ZP_05129491.1| ferredoxin [Clostridium sp. 7_2_43FAA] gi|226911184|gb|EEH96385.1| ferredoxin [Clostridium sp. 7_2_43FAA] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + ++C+ C C CPV+ +G+ I D CIDCG C CPV A Sbjct: 1 MAFKIEDSCVNCG--ACAAECPVNAISQGDTQFVIDEDTCIDCGNCANVCPVGAP 53 >gi|149915672|ref|ZP_01904198.1| iron-sulfur cluster-binding protein, putative [Roseobacter sp. AzwK-3b] gi|149810564|gb|EDM70407.1| iron-sulfur cluster-binding protein, putative [Roseobacter sp. AzwK-3b] Length = 632 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + C ++C+++CP + I P C CG C CP AI D + +I Sbjct: 257 VGC--SNCLDICPTGAIIPAGEHVTIDPMICAGCGACAARCPSGAITYDAPSPDTTFRRI 314 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 V T+ C LC CV +CP E + L D C+ CG+C CP DAI + Sbjct: 479 VDTDACTLCL--SCVSLCPSGALLENPDKPQLRFQEDACLQCGLCANVCPEDAITYE 533 >gi|302339374|ref|YP_003804580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636559|gb|ADK81986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T++C C C CPV+ E ++ I PD+C CG C CPV+AI D Sbjct: 1 MAYKITDDCTNCG--ACEAECPVEAISEKDDHRWIDPDQCTSCGTCAEVCPVEAILAD 56 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 D+C +CG CE ECPV+AI + Sbjct: 1 MAYKITDDCTNCGACEAECPVEAISEKDDHRW 32 >gi|149921106|ref|ZP_01909564.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Plesiocystis pacifica SIR-1] gi|149817993|gb|EDM77452.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Plesiocystis pacifica SIR-1] Length = 820 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 12/91 (13%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG---L 63 +C CK+ C+ CP I + C CG C CP + I+ Sbjct: 366 SCQHCKNPSCMLDCPTGAVGRDPEGEVFIREELCTGCGACAKACPWENIRMAPRGPSSAQ 425 Query: 64 ELWLKINSEYATQ--------WPNITTKKES 86 + W + E A + +P + TK +S Sbjct: 426 QRWGEPLREAAERKGMDLLAMFPEVATKCDS 456 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 29/104 (27%), Gaps = 35/104 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-----------------------NFLAIHPD---EC 40 E C C C + CP + + LA+ P+ +C Sbjct: 397 ELCTGCG--ACAKACPWENIRMAPRGPSSAQQRWGEPLREAAERKGMDLLAMFPEVATKC 454 Query: 41 IDCGV-----CEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 C C CP +AI + ++ + P+ Sbjct: 455 DSCRAYEAPACVQSCPTEAIVRLEPE--RDFGEVAAFLGVDAPD 496 >gi|296533719|ref|ZP_06896269.1| formate dehydrogenase [Roseomonas cervicalis ATCC 49957] gi|296265941|gb|EFH12016.1| formate dehydrogenase [Roseomonas cervicalis ATCC 49957] Length = 198 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C VCPV CFY + + +H D CI CG C CP A + Sbjct: 51 ISMACMHCTDAPCAAVCPVSCFYTTADAIVLHDKDLCIGCGYCFYACPFGAPQY 104 >gi|322419467|ref|YP_004198690.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320125854|gb|ADW13414.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M +++++ CI C C + CPV+ E + I D CIDCG C CPV AI P Sbjct: 1 MAHIISDECINCG--ACDDSCPVNAISEAGSKRTIAADTCIDCGACVDTCPVSAIAP 55 >gi|164687084|ref|ZP_02211112.1| hypothetical protein CLOBAR_00710 [Clostridium bartlettii DSM 16795] gi|164603969|gb|EDQ97434.1| hypothetical protein CLOBAR_00710 [Clostridium bartlettii DSM 16795] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y++ + CI C C CPV+C G++ I D CI+CG C CPV+A + Sbjct: 1 MAYIIGDACISCG--ACESECPVECISAGDDKYVIDADSCIECGSCADVCPVEAPCAE 56 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 15/29 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I D CI CG CE ECPV+ I + Sbjct: 1 MAYIIGDACISCGACESECPVECISAGDD 29 >gi|219856694|ref|YP_002473816.1| hypothetical protein CKR_3351 [Clostridium kluyveri NBRC 12016] gi|219570418|dbj|BAH08402.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 57 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CPV+C +G+ I CIDCG C CPV A Sbjct: 1 MAYKITDACMNCG--ACASECPVECISQGDTQFLIDDGTCIDCGSCASVCPVGAP 53 >gi|197286794|ref|YP_002152666.1| anaerobic reductase component B [Proteus mirabilis HI4320] gi|227355015|ref|ZP_03839426.1| anaerobic reductase component B [Proteus mirabilis ATCC 29906] gi|194684281|emb|CAR45833.1| putative anaerobic reductase component B [Proteus mirabilis HI4320] gi|227164802|gb|EEI49649.1| anaerobic reductase component B [Proteus mirabilis ATCC 29906] Length = 213 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+ CP + EG+ + + D+C+ CG C CP A + D Sbjct: 71 AYTLSISCNHCDDPICVKNCPTTAMHKREGDGIVMVDTDKCVGCGACAWSCPYGAPQMDP 130 Query: 60 EPGL 63 E Sbjct: 131 ETKQ 134 >gi|333029771|ref|ZP_08457832.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides coprosuis DSM 18011] gi|332740368|gb|EGJ70850.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides coprosuis DSM 18011] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M YV+ E+CI C C++ CPV+ EG + +I D C DCG C CP +AI P Sbjct: 1 MAYVINEDCIACG--TCIDECPVEAISEG-DIYSIDADICTDCGTCADVCPSEAIHP 54 >gi|294788766|ref|ZP_06754007.1| electron transport complex, RnfABCDGE type, B subunit [Simonsiella muelleri ATCC 29453] gi|294483248|gb|EFG30934.1| electron transport complex, RnfABCDGE type, B subunit [Simonsiella muelleri ATCC 29453] Length = 287 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ CI C T C+ CPVD F+ + DEC CG+C CPVD I D Sbjct: 81 LAYIDESVCIGC--TACIRACPVDAIMGASKFMHTVLTDECTGCGLCVAPCPVDCI--DL 136 Query: 60 EPGLELWLKINSEYATQ 76 + +L N A+Q Sbjct: 137 IDVKDEFLPRNHYLASQ 153 >gi|253583178|ref|ZP_04860376.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium varium ATCC 27725] gi|251833750|gb|EES62313.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium varium ATCC 27725] Length = 594 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 TY +T+ CI C T C VCP+D I+ + CI CG C C AI Sbjct: 539 TYSITDKCIGC--TACARVCPIDAITGTVKHRHEINNEICIKCGACYETCKFGAI 591 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI C C CP+DAI ++ +IN+E Sbjct: 544 DKCIGCTACARVCPIDAI----TGTVKHRHEINNE 574 >gi|288925659|ref|ZP_06419591.1| conserved hypothetical protein [Prevotella buccae D17] gi|315606445|ref|ZP_07881460.1| ferredoxin [Prevotella buccae ATCC 33574] gi|288337597|gb|EFC75951.1| conserved hypothetical protein [Prevotella buccae D17] gi|315251851|gb|EFU31825.1| ferredoxin [Prevotella buccae ATCC 33574] Length = 55 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CPV EG + +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPVGAISEG-DIYSINPDACTECGTCADVCPNEAI 52 >gi|254503333|ref|ZP_05115484.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222439404|gb|EEE46083.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 652 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V + C + C+++CP + + I P C CG+C CP A+ D Sbjct: 267 VNEDLCAHSRAQKTGCNRCLDLCPTGAITPAGDHITIDPMVCAGCGMCSAACPSGAVSYD 326 Query: 59 TEPGLELWLKINSEYATQW 77 ++ +I AT W Sbjct: 327 APTPQHVFKRI-ETLATTW 344 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 + C LC CV +CP E + L D C+ CG+C CP A Sbjct: 504 DACTLCL--SCVSLCPSGALKENPDQPQLRFQEDACLQCGICTNICPESA 551 >gi|327400615|ref|YP_004341454.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316123|gb|AEA46739.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 184 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + C+ C C++VCP+D Y+ + + ++ D CI CG C CP A + + Sbjct: 51 IPMPCMHCSDPACLKVCPMDAIYKRSDGIVLVNKDNCIGCGYCSYACPFGAPQFE 105 >gi|224373329|ref|YP_002607701.1| formate dehydrogenase subunit B [Nautilia profundicola AmH] gi|223588850|gb|ACM92586.1| formate dehydrogenase subunit B [Nautilia profundicola AmH] Length = 198 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C +VCPVDCFY E+ + +H D+CI CG C CP A + + Sbjct: 58 ACMHCTDAPCAQVCPVDCFYIREDGIVLHDKDKCIGCGYCLYACPFGAPQFPRDGAF 114 >gi|157830634|pdb|1CLF|A Chain A, Clostridium Pasteurianum Ferredoxin Length = 55 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + ++C+ C C CPV+ +G++ I D CIDCG C CPV A + Sbjct: 1 AYKIADSCVSCG--ACASECPVNAISQGDSIFVIDADTCIDCGNCANVCPVGAPVQE 55 >gi|330836748|ref|YP_004411389.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748651|gb|AEC02007.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta coccoides DSM 17374] Length = 55 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + +T+ CI C C CPV+ EG + I D CIDCG C CP AI + Sbjct: 1 MAHKITDACIACG--TCQPECPVNAISEG-DIYVIDADACIDCGACASACPTSAIIAE 55 >gi|110680105|ref|YP_683112.1| iron-sulfur cluster-binding protein, putative [Roseobacter denitrificans OCh 114] gi|109456221|gb|ABG32426.1| iron-sulfur cluster-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 651 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C++VCP +AI P C CG C CP AI D P ++ ++ Sbjct: 282 CLDVCPTGAITSAGEHVAIDPLICAGCGACSALCPSGAITYDAPPVGSVFSRL 334 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP AI KP Sbjct: 498 VDTDACTLCL--SCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAITLKPQL 555 Query: 60 EPGLELWLK 68 + + + Sbjct: 556 DLTDAAFTQ 564 >gi|322806085|emb|CBZ03652.1| NAD-reducing hydrogenase subunit HoxF [Clostridium botulinum H04402 065] Length = 631 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C CPV C + I+ ++CI CG C CPV AI Sbjct: 577 YEITDKCIGC--TKCARGCPVSCIIGKVKEKHFINQEKCIKCGNCYSVCPVGAI 628 >gi|238786898|ref|ZP_04630699.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] gi|238725266|gb|EEQ16905.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] Length = 205 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D E Sbjct: 60 AYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|300728400|ref|ZP_07061762.1| conserved domain protein [Prevotella bryantii B14] gi|299774319|gb|EFI70949.1| conserved domain protein [Prevotella bryantii B14] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++CI C C++ CPV EGE +I PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACG--TCIDECPVGAISEGE-KYSIDPDACTECGTCASVCPNEAI 52 >gi|15922102|ref|NP_377771.1| anaerobic dimethyl sulfoxide reductase [Sulfolobus tokodaii str. 7] gi|15622890|dbj|BAB66880.1| 391aa long hypothetical anaerobic dimethyl sulfoxide reductase [Sulfolobus tokodaii str. 7] Length = 391 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C++ C++VCP + ++ + + I+ +ECI CG C+ CP + K + E Sbjct: 47 ISIACNHCENPLCMKVCPANAIHKDDMGIVYINGNECIGCGYCQWACPYEEPKFNHE 103 >gi|126734228|ref|ZP_01749975.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] gi|126717094|gb|EBA13958.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseobacter sp. CCS2] Length = 643 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 7/66 (10%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV T C + T+C+++CP + ++I P C CG C CP AI Sbjct: 257 YVQTAPLLCAHSRAGQTGCTNCLDLCPTGAISPEGDHVSIDPMICAGCGACSAGCPSGAI 316 Query: 56 KPDTEP 61 D P Sbjct: 317 SYDAPP 322 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T++C LC CV +CP + + L D C+ CG+C CP DAI Sbjct: 491 VNTDSCTLCL--SCVSLCPSGALGDNPDKPQLRFQEDACLQCGLCVQICPEDAI 542 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 14/50 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDE---CIDCG 44 + C+ C CV++CP D N ++ +E C++CG Sbjct: 525 DACLQCGL--CVQICPEDAITLAPRLDLTDAALNQTVLNEEEPFACVECG 572 >gi|323492673|ref|ZP_08097817.1| formate dehydrogenase, iron-sulfur subunit [Vibrio brasiliensis LMG 20546] gi|323313048|gb|EGA66168.1| formate dehydrogenase, iron-sulfur subunit [Vibrio brasiliensis LMG 20546] Length = 202 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP DCF E+ + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCKAVCPADCFEHTEDGIVLHNKDLCIGCGYCLFACPFGAPQFPKQASF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|188585874|ref|YP_001917419.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350561|gb|ACB84831.1| NADH dehydrogenase (quinone) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 604 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 + +T++CI C C + CPV + + I +EC+ CG+C C DAI Sbjct: 530 AFSITDDCIGCGV--CKKSCPVGAISGDKKEIHIIDQEECVKCGMCVSACKFDAIH 583 Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 D+CI CGVC+ CPV AI D + Sbjct: 535 DDCIGCGVCKKSCPVGAISGDKKE 558 >gi|42527242|ref|NP_972340.1| ferredoxin, 2(4Fe-4S) [Treponema denticola ATCC 35405] gi|41817666|gb|AAS12251.1| ferredoxin, 2(4Fe-4S) [Treponema denticola ATCC 35405] Length = 56 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ C C C CPV+ E I D CI CG C CPV+AI + Sbjct: 1 MAYKISNECTNC--AACESECPVNAISEAGGKHVIDADTCISCGACAGVCPVEAISEE 56 >gi|239908207|ref|YP_002954948.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239798073|dbj|BAH77062.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 375 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C +CV VCPV I CI CG C CP A+ D + +++ Sbjct: 202 CIGC--AECVAVCPVGAATMQGKKAVIDKATCIGCGECLTVCPKKAMSIDWRTEIVPFME 259 Query: 69 INSEYA 74 EYA Sbjct: 260 RMVEYA 265 Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDA 54 + P +CI C C CPV A Sbjct: 195 FVVEPKKCIGCAECVAVCPVGA 216 >gi|294674586|ref|YP_003575202.1| ferredoxin [Prevotella ruminicola 23] gi|294473796|gb|ADE83185.1| putative ferredoxin [Prevotella ruminicola 23] Length = 55 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++CI C C CPV+ EGE +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACG--TCQGECPVEAISEGE-KYSINPDLCTECGTCASVCPSEAI 52 >gi|119355969|ref|YP_910613.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119353318|gb|ABL64189.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeobacteroides DSM 266] Length = 517 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y C C CV +CPV+ + E+ + CI C C CP +A+ D E Sbjct: 51 YFTVLRCNHCAEPPCVAICPVEALQKREDGIVDFDGRRCIGCKACAQACPYNALYIDPE 109 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 22/74 (29%), Gaps = 23/74 (31%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCG---------VCEPECPVDA 54 CI CK C + CP + L I P+ +C C C CP A Sbjct: 89 CIGCK--ACAQACPYNA-------LYIDPETHTSAKCNYCAHRKEVGLQPACVAICPQQA 139 Query: 55 IKPDTEPGLELWLK 68 I + Sbjct: 140 IVSGDLDDPSSKIA 153 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 8/22 (36%) Query: 32 FLAIHPDECIDCGVCEPECPVD 53 I +CI C C C + Sbjct: 4 GFVIDARKCIGCHACTVACKSE 25 >gi|332973049|gb|EGK10986.1| iron-sulfur cluster-binding protein [Kingella kingae ATCC 23330] Length = 285 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I +P E +L Sbjct: 79 CIGC--TACIRACPVDAIMGASKLMHTVLADECTGCGLCVAPCPVDCIY--LQPTKETYL 134 Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 74 IDEAVCIGCTACIRACPVDAI 94 >gi|257790220|ref|YP_003180826.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830340|ref|ZP_08163797.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|257474117|gb|ACV54437.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487807|gb|EGC90245.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 215 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + C+ C++ CV VCPV Y G++ + I D CI C C CP A Sbjct: 59 IPRPCMQCENPACVSVCPVSATYRGDDGIVVIDADRCIGCKYCIAACPYGA 109 >gi|291520273|emb|CBK75494.1| 4Fe-4S binding domain [Butyrivibrio fibrisolvens 16/4] Length = 56 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++C+ C C CPV +G++ I C++CG C CP AI Sbjct: 1 MAYVISDSCVSCG--TCEPECPVGAISQGDSQFQIDETACVECGTCAGVCPTGAI 53 >gi|253580083|ref|ZP_04857350.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848602|gb|EES76565.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 303 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E C CK + CPV + L I P+ECI CG C+ +CP A+ P+ + G ++ Sbjct: 180 SEKCRGCKKCQIEKSCPVHVPKLVDGKLYIDPEECIHCGRCKGKCPFGAV-PEYQNGYKI 238 Query: 66 WL 67 ++ Sbjct: 239 YI 240 >gi|126459018|ref|YP_001055296.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126248739|gb|ABO07830.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 275 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 NC+ C C CP + I+ D CI CG CE CP + K Sbjct: 91 NCLHCVDAPCARACPAGAIVTTPEGAVVINKDLCIGCGYCENACPFNVPK 140 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 8/53 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECID------CGVCEPECPVD 53 + CI C + C CP + +G++ C+D C CP Sbjct: 122 DLCIGCGY--CENACPFNVPKKGQDGKYYKCTFCVDRIQNGRAPACVEVCPTG 172 >gi|295111871|emb|CBL28621.1| Uncharacterized conserved protein [Synergistetes bacterium SGP1] Length = 203 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + ENCI C C VCP D G F AI C+ CG C CPV AI+ Sbjct: 151 YHIMENCIGCG--TCQAVCPQDAISSGTPF-AIDESHCLQCGNCAENCPVKAIE 201 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI CG C+ CP DAI T Sbjct: 155 ENCIGCGTCQAVCPQDAISSGTP 177 >gi|187776781|ref|ZP_02993254.1| hypothetical protein CLOSPO_00297 [Clostridium sporogenes ATCC 15579] gi|187775440|gb|EDU39242.1| hypothetical protein CLOSPO_00297 [Clostridium sporogenes ATCC 15579] Length = 497 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FTVTEACRGCIQHKCMEVCSAKALARINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKRVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMGACPFGAISD 205 >gi|168187953|ref|ZP_02622588.1| conserved domain protein [Clostridium botulinum C str. Eklund] gi|169294213|gb|EDS76346.1| conserved domain protein [Clostridium botulinum C str. Eklund] Length = 57 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + ++C+ C C CPV +G++ I CIDCG C CPV AI Sbjct: 1 MAFKIGDSCVSCG--SCASECPVGAISQGDSQFDIDASACIDCGNCANVCPVGAI 53 >gi|158321482|ref|YP_001513989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141681|gb|ABW19993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 56 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++E+CI C C CPV G+ I D CI+CG C CPVDA KP+ Sbjct: 1 MAYKISEDCISCG--ACEPECPVSVISAGDTQYVIDADGCIECGACANVCPVDAPKPE 56 >gi|51246839|ref|YP_066723.1| formate dehydrogenase, iron-sulfur chain [Desulfotalea psychrophila LSv54] gi|50877876|emb|CAG37716.1| probable formate dehydrogenase, iron-sulfur chain [Desulfotalea psychrophila LSv54] Length = 188 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C +VCPVDCFY E+ + +H ++CI CG C CP A + + Sbjct: 59 ACMHCADAPCQKVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGAPQFPRDGAF 115 >gi|18313624|ref|NP_560291.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|18161171|gb|AAL64473.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] Length = 232 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C+ T C VCP Y+ + I D CI CG C CP + Sbjct: 64 FISSLCYHCEDTPCQRVCPTGATYKTPEGVVLIDKDLCIGCGYCIIACPYGSRYRPEPHE 123 Query: 63 LEL 65 Sbjct: 124 WHE 126 >gi|261403277|ref|YP_003247501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370270|gb|ACX73019.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 164 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C C EVCPV + ++ ++ D CI CG+C CP AI + + Sbjct: 44 CQHCASAPCKEVCPVSAIEHKDGYVYLNEDICIGCGLCALACPFGAISMEDKA 96 >gi|163736984|ref|ZP_02144402.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] gi|161389588|gb|EDQ13939.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Phaeobacter gallaeciensis BS107] Length = 649 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV TE C + T C+++CP + ++I P C CG C CP AI Sbjct: 260 YVRTEPLLCAHSRAGQTGCTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 319 Query: 56 KPDTEPGLELWLKI 69 D P L +I Sbjct: 320 TYDAPPTDALMRRI 333 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 V ++NC LC CV +CP + + L D C+ CG+C CP DAI + Sbjct: 496 VSSDNCTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITYE 550 >gi|291542068|emb|CBL15178.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Ruminococcus bromii L2-63] Length = 56 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y ++++CI+C C + CP D EG+ I+ D C+DCG C CPV A + Sbjct: 1 MAYTISDDCIMCG--ACADNCPCDAISEGDGKYEINADACVDCGSCAEVCPVGAPQE 55 >gi|255527959|ref|ZP_05394800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296188409|ref|ZP_06856800.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255508353|gb|EET84752.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296047030|gb|EFG86473.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 368 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + C+ C C +VCP ++ D+CI CG C C AI D + Sbjct: 190 VQNDKCVGCGQ--CAKVCPEQAITIENRKASVSHDKCIGCGECMTVCKPKAIGMDWSSEM 247 Query: 64 ELWLKINSEYA 74 +++ +EYA Sbjct: 248 NPFIERLTEYA 258 >gi|197118659|ref|YP_002139086.1| ferredoxin-like protein [Geobacter bemidjiensis Bem] gi|253700567|ref|YP_003021756.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|197088019|gb|ACH39290.1| ferredoxin-related protein [Geobacter bemidjiensis Bem] gi|251775417|gb|ACT17998.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 55 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + +++ CI C C + CPV+ E + I D CIDCG C CPV AI Sbjct: 1 MAHTISDECINCG--ACDDSCPVNAISEAGDKRTIAADTCIDCGACVDTCPVSAI 53 >gi|157377550|ref|YP_001476150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319924|gb|ABV39022.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 196 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C C VCP +CFY+ E+ L +H D CI CG C CP A + Sbjct: 56 ACMHCTDAPCQAVCPANCFYKTEDGLTLHNKDTCIGCGYCLYACPFGAP---------QF 106 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKY 100 K + + + T P D +QKY Sbjct: 107 PKKGAFGSRGKMDKCTFCAGGPEETHSDAERQKY 140 >gi|261878703|ref|ZP_06005130.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270334710|gb|EFA45496.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 56 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ E+C+ C C++ CPV EG + +I PDEC +CG C CP +AI Sbjct: 1 MAYVINEDCVACG--TCIDECPVSAISEG-DIYSIDPDECTECGSCAAVCPQEAI 52 >gi|313679989|ref|YP_004057728.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Oceanithermus profundus DSM 14977] gi|313152704|gb|ADR36555.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Oceanithermus profundus DSM 14977] Length = 257 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++C+ C CVE CP E + + D CI C C CP DAI D E G Sbjct: 75 DSCMHCSSAACVEACPTGAVGYREGGVVTVDQDWCIGCRNCVQACPYDAIHYDEEKG 131 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 16/65 (24%) Query: 4 VVT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECP 51 VVT + CI C +CV+ CP D + E + D+C C C CP Sbjct: 101 VVTVDQDWCIGC--RNCVQACPYDAIHYDEEKGVV--DKCTLCYDRVSNGLEPACVKACP 156 Query: 52 VDAIK 56 A+ Sbjct: 157 TGALH 161 >gi|34556486|ref|NP_906301.1| putative formate dehydrogenase iron-sulfur subunit [Wolinella succinogenes DSM 1740] gi|34557139|ref|NP_906954.1| formate dehydrogenase subunit [Wolinella succinogenes DSM 1740] gi|34557519|ref|NP_907334.1| putative formate dehydrogenase iron-sulfur subunit [Wolinella succinogenes DSM 1740] gi|119888|sp|P27273|FDHB_WOLSU RecName: Full=Formate dehydrogenase iron-sulfur subunit gi|48508|emb|CAA37990.1| formate dehydrogenase [Wolinella succinogenes] gi|34482200|emb|CAE09201.1| PUTATIVE FORMATE DEHYDROGENASE IRON-SULFUR SUBUNIT [Wolinella succinogenes] gi|34482855|emb|CAE09854.1| FORMATE DEHYDROGENASE SUBUNIT [Wolinella succinogenes] gi|34483236|emb|CAE10234.1| PUTATIVE FORMATE DEHYDROGENASE IRON-SULFUR SUBUNIT [Wolinella succinogenes] Length = 200 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 C+ C C +VCPVDCFY + + +H ++CI CG C CP A + Sbjct: 58 ACMHCSDAPCAQVCPVDCFYVRADGIVLHDKEKCIGCGYCLYACPFGAPQF 108 >gi|307130319|ref|YP_003882335.1| hydrogenase 4, 4Fe-4S subunit [Dickeya dadantii 3937] gi|306527848|gb|ADM97778.1| hydrogenase 4, 4Fe-4S subunit [Dickeya dadantii 3937] Length = 208 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ +N + + + CI C +C CP AI P Sbjct: 51 CRHCEDAPCARVCPVNAIRHQDNAVLLDENTCIGCKLCAIACPFGAITP 99 >gi|110800553|ref|YP_697264.1| [Fe] hydrogenase [Clostridium perfringens ATCC 13124] gi|110675200|gb|ABG84187.1| [Fe] hydrogenase [Clostridium perfringens ATCC 13124] Length = 490 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|150018616|ref|YP_001310870.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905081|gb|ABR35914.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 184 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V C C++ C +VCP++ +N + I + CI C C CP AI+ T+ Sbjct: 54 FTVPVQCRHCENAPCAKVCPINAIKNEDNAIIIDEEICIGCKACAVACPFGAIEMGTK 111 >gi|322832975|ref|YP_004213002.1| glutamate synthase, small subunit [Rahnella sp. Y9602] gi|321168176|gb|ADW73875.1| glutamate synthase, small subunit [Rahnella sp. Y9602] Length = 659 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 3 YVVTEN-------CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+ +N C C+ C++VCP + F + + + + CI C C CP AI Sbjct: 42 HVIRQNDRHSAVLCRQCEDAPCLQVCPTNAFVRRNDSIQLLEERCIGCKTCAVACPFGAI 101 >gi|220904268|ref|YP_002479580.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868567|gb|ACL48902.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 366 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++CI C CV CP ++ + CI C C CP AI D +E + Sbjct: 193 DDCIGC--AKCVHSCPQQALSMRDHKSHVETARCIGCFECMTVCPAKAIVIDWATEMEPF 250 Query: 67 LKINSEYA 74 ++ +EYA Sbjct: 251 MERMTEYA 258 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 32 FLAIHPDECIDCGVCEPECPVDA 54 ++I+ D+CI C C CP A Sbjct: 187 HVSINKDDCIGCAKCVHSCPQQA 209 >gi|254457148|ref|ZP_05070576.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207085940|gb|EDZ63224.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 202 Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 M + ++ C+ C C +VCPVDCFY E+ + +H + CI C C CP A + Sbjct: 53 MEFSLSVACMHCTDAPCEQVCPVDCFYIREDGIVLHNKEVCIGCAYCLYACPFGAPQFPK 112 Query: 60 EPGL 63 + Sbjct: 113 DGAF 116 >gi|269122058|ref|YP_003310235.1| hydrogenase large subunit domain protein [Sebaldella termitidis ATCC 33386] gi|268615936|gb|ACZ10304.1| hydrogenase large subunit domain protein [Sebaldella termitidis ATCC 33386] Length = 488 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+NC C C++ C + I C CG C CP AI P Sbjct: 98 FTVTDNCQNCLTKKCIKSCAFGAISATKKGAYIDKQLCKKCGKCVASCPYHAIVDIERP 156 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVC 46 Y+ + C C C + CPVD EN I +CI+CG+C Sbjct: 128 AYIDKQLCKKCGKCVASCPYHAIVDIERPCKKSCPVDAIEIDENDIAIIDSTKCINCGLC 187 Query: 47 EPECPVDAIKP 57 CP AI Sbjct: 188 INNCPFGAISD 198 >gi|168205840|ref|ZP_02631845.1| [Fe] hydrogenase [Clostridium perfringens E str. JGS1987] gi|170662681|gb|EDT15364.1| [Fe] hydrogenase [Clostridium perfringens E str. JGS1987] Length = 490 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|39997802|ref|NP_953753.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|39984694|gb|AAR36080.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|298506743|gb|ADI85466.1| ferredoxin-related protein [Geobacter sulfurreducens KN400] Length = 56 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M++ ++++C C CV+ CPV+ + I D CIDCG C CPV AI Sbjct: 1 MSHAISDDCTNCG--ACVDSCPVNAIAPAGDKHKIDADTCIDCGACVDTCPVSAI 53 >gi|295092507|emb|CBK78614.1| Iron only hydrogenase large subunit, C-terminal domain [Clostridium cf. saccharolyticum K10] Length = 507 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP I D+CI CG C+ C +AI P Sbjct: 117 VTDGCQGCLAHPCVEVCPKGAVTLDRTNGRSYIDQDKCIKCGKCKEVCGYNAIIIQERP 175 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 +Y+ + CI C C C +D + N A I D+C+ CG C Sbjct: 147 SYIDQDKCIKCGKCKEVCGYNAIIIQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|45359065|ref|NP_988622.1| hypothetical protein MMP1502 [Methanococcus maripaludis S2] gi|45047940|emb|CAF31058.1| conserved archaeal protein, pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] Length = 138 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C+ VCP D + + + +HP++C+ C +C CPV AI+ D Sbjct: 35 CMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQID 84 >gi|169343278|ref|ZP_02864288.1| [Fe] hydrogenase [Clostridium perfringens C str. JGS1495] gi|169298576|gb|EDS80657.1| [Fe] hydrogenase [Clostridium perfringens C str. JGS1495] Length = 490 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|309792281|ref|ZP_07686753.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6] gi|308225822|gb|EFO79578.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6] Length = 476 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 7/87 (8%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + + C C +CVE CP F E + + C CG C P CP + T+ Sbjct: 354 ILDACRQCTVGPECVEACPEHAFERTEEGVLLITQRCTGCGACIPACPYQVVSSITQEHF 413 Query: 64 ELWLKINSEYATQWPNITTKKESLPSA 90 E E + W + + + PSA Sbjct: 414 EP------EALSLWKRLLRRFQPQPSA 434 >gi|295094175|emb|CBK83266.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Coprococcus sp. ART55/1] Length = 56 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V+ ++CI C C CPV + I +CI CG C CPV I + Sbjct: 1 MAFVIGDSCIGCG--SCAGACPVGAISDNGGVFVIDGSQCISCGACAGSCPVGTIAEE 56 >gi|258515754|ref|YP_003191976.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779459|gb|ACV63353.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 369 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + CI C C VCP N I PD CI CG C CP AI+ D E Sbjct: 190 VNQDKCIGC--AQCSTVCPEKASTLNDNNKAEISPDSCIGCGECLTTCPEKAIEMDWETE 247 Query: 63 LELWLKINSEYA 74 + L+ +EYA Sbjct: 248 IPALLERMTEYA 259 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 32 FLAIHPDECIDCGVCEPECPVDA 54 + ++ D+CI C C CP A Sbjct: 187 KMIVNQDKCIGCAQCSTVCPEKA 209 >gi|254475789|ref|ZP_05089175.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] gi|214030032|gb|EEB70867.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. R11] Length = 649 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 7/74 (9%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV +E C + T C++VCP + ++I P C CG C CP AI Sbjct: 260 YVRSEPLLCAHSRAGQTGCTRCLDVCPTGAISPDGDHVSIDPMICAGCGSCASLCPSGAI 319 Query: 56 KPDTEPGLELWLKI 69 D P +I Sbjct: 320 TYDAPPTDAQMRRI 333 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 V ++ C LC CV +CP + + L D C+ CG+C CP +AI + Sbjct: 496 VASDKCTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPENAISYE 550 >gi|296110006|ref|YP_003616955.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434820|gb|ADG13991.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 166 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C EVCPV+ Y ++++ + ++CI CG+C CP AI + + Sbjct: 44 CQHCRSAPCKEVCPVEAIYFKDSYVYLDLEKCIGCGLCALACPFGAITMEDKA 96 >gi|283796610|ref|ZP_06345763.1| Fe-hydrogenase large subunit family protein [Clostridium sp. M62/1] gi|291076031|gb|EFE13395.1| Fe-hydrogenase large subunit family protein [Clostridium sp. M62/1] Length = 507 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP I D+CI CG C+ C +AI P Sbjct: 117 VTDGCQGCLAHPCVEVCPKGAVTLDRTNGRSYIDQDKCIKCGKCKEVCGYNAIIVQERP 175 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 +Y+ + CI C C C +D + N A I D+C+ CG C Sbjct: 147 SYIDQDKCIKCGKCKEVCGYNAIIVQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|258516935|ref|YP_003193157.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] gi|257780640|gb|ACV64534.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Desulfotomaculum acetoxidans DSM 771] Length = 677 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + CI C C + CPVD GE I P++CI CG C +CP D I + Sbjct: 570 VLEDQCIACG--ICAKACPVDAIS-GERKKPPYKIDPEKCIRCGACMEKCPKDVIIRGSI 626 Query: 61 PGLE 64 PG + Sbjct: 627 PGFK 630 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CP + ++L + D+CI CG+C CPVDAI + + Sbjct: 557 CPAGVCKDLLHYLVL-EDQCIACGICAKACPVDAISGERKKP 597 >gi|319425621|gb|ADV53695.1| respiratory arsenate reductase, FeS subunit, ArrB [Shewanella putrefaciens 200] Length = 234 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 TY+ T C C CV+VCP ++ + L + + DECI C C CP I +T Sbjct: 51 TYIPT-LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISFNTA 109 Query: 61 PGLELW 66 W Sbjct: 110 TPHRRW 115 >gi|18311557|ref|NP_563491.1| [Fe] hydrogenase [Clostridium perfringens str. 13] gi|168213503|ref|ZP_02639128.1| [Fe] hydrogenase [Clostridium perfringens CPE str. F4969] gi|168217341|ref|ZP_02642966.1| [Fe] hydrogenase [Clostridium perfringens NCTC 8239] gi|18146241|dbj|BAB82281.1| probable hydrogenase [Clostridium perfringens str. 13] gi|170715055|gb|EDT27237.1| [Fe] hydrogenase [Clostridium perfringens CPE str. F4969] gi|182380626|gb|EDT78105.1| [Fe] hydrogenase [Clostridium perfringens NCTC 8239] Length = 490 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|120599742|ref|YP_964316.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120559835|gb|ABM25762.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 234 Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 TY+ T C C CV+VCP ++ + L + + DECI C C CP I +T Sbjct: 51 TYIPT-LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISFNTA 109 Query: 61 PGLELW 66 W Sbjct: 110 TPHRRW 115 >gi|330508939|ref|YP_004385367.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta concilii GP-6] gi|328929747|gb|AEB69549.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta concilii GP-6] Length = 811 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV + CI CK CV+VCP ++ + C CG C CPVDAIK Sbjct: 572 AYVDPDLCIKCKL--CVDVCPQKAISV-KSPAYVDEAACKGCGSCAAACPVDAIKMRLFS 628 Query: 62 GLELWLKINS--EYATQWPNI 80 ++ +I + E ++P I Sbjct: 629 DEQILAQIRAATEVKKEFPLI 649 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENFLA-------------IHPDECIDCG 44 YV C C + +C +VCPV+ E G+ + P CI CG Sbjct: 237 YVDPVLCKGCIN-ECADVCPVEVPNEYDFGIGKRKAIYVPYPQAVPLSACVDPKACIGCG 295 Query: 45 VCEPECPVDAIKPD 58 C CP A+K D Sbjct: 296 RCVESCPTQAVKLD 309 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 13/32 (40%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + PD CI C +C CP AI + Sbjct: 569 PTSAYVDPDLCIKCKLCVDVCPQKAISVKSPA 600 >gi|295115323|emb|CBL36170.1| Iron only hydrogenase large subunit, C-terminal domain [butyrate-producing bacterium SM4/1] Length = 507 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP I D+CI CG C+ C +AI P Sbjct: 117 VTDGCQGCLAHPCVEVCPKGAVTLDRTNGRSYIDQDKCIKCGKCKEVCGYNAIIVQERP 175 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVC 46 +Y+ + CI C C C +D + N A I D+C+ CG C Sbjct: 147 SYIDQDKCIKCGKCKEVCGYNAIIVQERPCAAACGMDAIHSDVNGKADIDYDKCVSCGQC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|182624288|ref|ZP_02952073.1| [Fe] hydrogenase [Clostridium perfringens D str. JGS1721] gi|177910506|gb|EDT72879.1| [Fe] hydrogenase [Clostridium perfringens D str. JGS1721] Length = 490 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 20/67 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAI 55 +CP AI Sbjct: 193 DCPFGAI 199 >gi|224418325|ref|ZP_03656331.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter canadensis MIT 98-5491] gi|253827646|ref|ZP_04870531.1| formate dehydrogenase subunit B [Helicobacter canadensis MIT 98-5491] gi|313141855|ref|ZP_07804048.1| formate dehydrogenase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] gi|253511052|gb|EES89711.1| formate dehydrogenase subunit B [Helicobacter canadensis MIT 98-5491] gi|313130886|gb|EFR48503.1| formate dehydrogenase iron-sulfur subunit [Helicobacter canadensis MIT 98-5491] Length = 209 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 63 VSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGAPQFPKNGVF 122 Query: 64 ELWLKIN 70 E ++ Sbjct: 123 ESRGAMD 129 >gi|293607054|ref|ZP_06689397.1| benzoyl-CoA oxygenase [Achromobacter piechaudii ATCC 43553] gi|292814544|gb|EFF73682.1| benzoyl-CoA oxygenase [Achromobacter piechaudii ATCC 43553] Length = 416 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CPVD N + PD C C C P CP +I Sbjct: 18 EICIRCN--TCEETCPVDAITHDSNNYVVDPDICNGCMACVPPCPTGSI 64 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 16/26 (61%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D+ Sbjct: 15 IDPEICIRCNTCEETCPVDAITHDSN 40 >gi|242241404|ref|YP_002989585.1| oxidoreductase Fe-S binding subunit [Dickeya dadantii Ech703] gi|242133461|gb|ACS87763.1| glutamate synthase, small subunit [Dickeya dadantii Ech703] Length = 671 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C VCP + + ++CI C C CP AI +T+ G Sbjct: 56 CRHCEDAPCASVCPTQALVRKNESIQLIQEKCIGCKTCVLACPFGAISVETQQG 109 >gi|229826121|ref|ZP_04452190.1| hypothetical protein GCWU000182_01486 [Abiotrophia defectiva ATCC 49176] gi|229789694|gb|EEP25808.1| hypothetical protein GCWU000182_01486 [Abiotrophia defectiva ATCC 49176] Length = 507 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C CVEVCP C I D CI CG C CP A+ P Sbjct: 116 FVTDGCQGCLAHPCVEVCPKTCVSLDRTNGRSKIDQDVCIKCGKCAEVCPYHAVIIQERP 175 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 19/66 (28%) Query: 7 ENCILCKHTDCVEVCP----------------VDCFY-EGENFLAIHPDECIDCGVCEPE 49 + CI C C EVCP +D + + I ++C+ CG C Sbjct: 152 DVCIKCG--KCAEVCPYHAVIIQERPCAAACGMDAIHSDVHGKADIDYEKCVSCGQCLVN 209 Query: 50 CPVDAI 55 CP AI Sbjct: 210 CPFGAI 215 >gi|168209817|ref|ZP_02635442.1| [Fe] hydrogenase [Clostridium perfringens B str. ATCC 3626] gi|170712096|gb|EDT24278.1| [Fe] hydrogenase [Clostridium perfringens B str. ATCC 3626] Length = 490 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++VT+ C C C + C I ++C +CG C+ CP +AI P Sbjct: 100 FIVTDACRGCLAKKCRDSCNFGAISFDNRKCKIDYEKCKECGKCKEVCPYNAIAEVKRP 158 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 20/69 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN------------------FLAIHPDECIDCGVCEP 48 E C C C EVCP + E + I +CI CG C Sbjct: 135 EKCKECG--KCKEVCPYNAIAEVKRPCMRACIPKALSYDVDSKKAVIDDSKCIQCGACVV 192 Query: 49 ECPVDAIKP 57 +CP AI Sbjct: 193 DCPFGAIMD 201 >gi|121534272|ref|ZP_01666096.1| electron transfer flavoprotein, alpha subunit [Thermosinus carboxydivorans Nor1] gi|121307042|gb|EAX47960.1| electron transfer flavoprotein, alpha subunit [Thermosinus carboxydivorans Nor1] Length = 399 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V+ + C+ C CV CP E +N I + C CG C CPV AI + E Sbjct: 5 VIKDQCVSCG--ACVSTCPFGAIIMESDNKAFIT-EACTACGACIDACPVGAIIREEEE 60 >gi|327484141|gb|AEA78548.1| Formate dehydrogenase-O, iron-sulfur subunit [Vibrio cholerae LMA3894-4] Length = 202 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF + + +H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFVHTADGIVLHNKDLCIGCGYCLFACPFGAPQFPKQTAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 GERGKMD 119 >gi|51245620|ref|YP_065504.1| formate dehydrogenase, beta subunit (iron-sulfur subunit) [Desulfotalea psychrophila LSv54] gi|50876657|emb|CAG36497.1| probable formate dehydrogenase, beta subunit (iron-sulfur subunit) [Desulfotalea psychrophila LSv54] Length = 197 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 ++ +C+ C C+ VCPVD Y+ ++ + + +CI CG C CP A + Sbjct: 51 ISISCMHCADAPCIAVCPVDAIYQRDDGIVLADKKKCIGCGYCFMACPFGAPQF 104 >gi|255526810|ref|ZP_05393709.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296186424|ref|ZP_06854827.1| protein HymB [Clostridium carboxidivorans P7] gi|255509489|gb|EET85830.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296048871|gb|EFG88302.1| protein HymB [Clostridium carboxidivorans P7] Length = 631 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C T C+ CPV+C + I +CI CG C CPVDAI Sbjct: 577 YEITDKCIGC--TKCLRNCPVNCINGKVKQVHTIDQSKCIKCGACCSGCPVDAI 628 >gi|296109958|ref|YP_003616907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434772|gb|ADG13943.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 151 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C+LC C EVCP +C ++GE + I+ ++C+ CG C CP AIK Sbjct: 16 YVIKDRCVLCNL--CKEVCPANCIFDGEESVEINKEKCMFCGRCVKVCPTKAIK 67 >gi|271501139|ref|YP_003334164.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270344694|gb|ACZ77459.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 208 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C +VCPV+ +N + + + CI C +C CP AI P Sbjct: 51 CRHCEDAPCAKVCPVNAITHQDNAVLLDENTCIGCKLCAIACPFGAITP 99 >gi|77920137|ref|YP_357952.1| putative ferredoxin [Pelobacter carbinolicus DSM 2380] gi|77546220|gb|ABA89782.1| putative ferredoxin [Pelobacter carbinolicus DSM 2380] Length = 59 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + +TE+CI C C + CP+ E + I D C DCG C CPVDAIK D Sbjct: 4 LAHTITEDCINCG--ACDDSCPLGAIEEKGDARVIDADACTDCGACVDSCPVDAIKAD 59 >gi|325969146|ref|YP_004245338.1| indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Vulcanisaeta moutnovskia 768-28] gi|323708349|gb|ADY01836.1| indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Vulcanisaeta moutnovskia 768-28] Length = 616 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--TE 60 YV + C C + CP E I P+ C+ C VC CP DAIKP+ + Sbjct: 549 YVNPDACKACGICYNLIACPAIVPLE-NRKAWIDPNMCVGCSVCAQVCPYDAIKPEGNVK 607 Query: 61 PGLELWLKI 69 L W ++ Sbjct: 608 DWLRKWAEM 616 >gi|148657272|ref|YP_001277477.1| cyclic nucleotide-binding protein [Roseiflexus sp. RS-1] gi|148569382|gb|ABQ91527.1| cyclic nucleotide-binding protein [Roseiflexus sp. RS-1] Length = 482 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + + C C+ +CVE CP D E+ D C CG C P CP A+ Sbjct: 357 IADACRQCRVGAECVEACPEDAIVWNESGALFITDACNGCGACVPACPYHAV 408 >gi|126697867|ref|YP_001086764.1| putative iron-sulfur-binding protein [Clostridium difficile 630] gi|254973963|ref|ZP_05270435.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-66c26] gi|255091349|ref|ZP_05320827.1| putative iron-sulfur-binding protein [Clostridium difficile CIP 107932] gi|255099467|ref|ZP_05328444.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-63q42] gi|255305324|ref|ZP_05349496.1| putative iron-sulfur-binding protein [Clostridium difficile ATCC 43255] gi|255313007|ref|ZP_05354590.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-76w55] gi|255515766|ref|ZP_05383442.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-97b34] gi|255648859|ref|ZP_05395761.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-37x79] gi|260682075|ref|YP_003213360.1| putative iron-sulfur-binding protein [Clostridium difficile CD196] gi|260685673|ref|YP_003216806.1| putative iron-sulfur-binding protein [Clostridium difficile R20291] gi|306518976|ref|ZP_07405323.1| putative iron-sulfur-binding protein [Clostridium difficile QCD-32g58] gi|115249304|emb|CAJ67117.1| putative iron-sulfur-binding protein [Clostridium difficile] gi|260208238|emb|CBA60619.1| putative iron-sulfur-binding protein [Clostridium difficile CD196] gi|260211689|emb|CBE01977.1| putative iron-sulfur-binding protein [Clostridium difficile R20291] Length = 357 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C CV CP + I D C CG C CP A+ E +++++ Sbjct: 197 CVGCG--KCVNSCPTKAISIVDKKAVIDSDVCYGCGECPTVCPTRAVTIQWESDSDVFVE 254 Query: 69 INSEYA 74 +EYA Sbjct: 255 KMAEYA 260 Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 + +C+ CG C CP AI Sbjct: 191 VVKEKKCVGCGKCVNSCPTKAI 212 >gi|308051289|ref|YP_003914855.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] gi|307633479|gb|ADN77781.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEP 61 ++ C+ C C++VCPV+ F + E+ + +H E CI CG C CP A + + Sbjct: 53 ISVACMHCADAPCMKVCPVNVFSKTEDGIVLHDKERCIGCGYCLYACPFGAPQFPKKA 110 >gi|296272504|ref|YP_003655135.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096678|gb|ADG92628.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 198 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C +VCP DCFY + + +H D CI CG C CP A + + Sbjct: 59 ISMACMHCADAPCQQVCPTDCFYIRTDGIVLHNKDICIGCGYCLFACPFGAPQFPKDGAF 118 >gi|212550384|ref|YP_002308701.1| ferredoxin [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548622|dbj|BAG83290.1| ferredoxin [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 55 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+TE+CI C C++ CPV+ EG + +I + C +CG C CP +AI Sbjct: 1 MAYVITEDCIACG--TCIDECPVEAISEG-DIYSIDANNCTECGSCASVCPSEAI 52 >gi|242309248|ref|ZP_04808403.1| fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter pullorum MIT 98-5489] gi|239524289|gb|EEQ64155.1| fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter pullorum MIT 98-5489] Length = 209 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 63 VSVACMHCADAPCAQVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGAPQFPKNGVF 122 Query: 64 ELWLKIN 70 E ++ Sbjct: 123 ESRGAMD 129 >gi|159905554|ref|YP_001549216.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887047|gb|ABX01984.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 167 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C+EVCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAIY 91 >gi|330829820|ref|YP_004392772.1| hydrogenase 4 Fe-S subunit [Aeromonas veronii B565] gi|328804956|gb|AEB50155.1| Hydrogenase 4 Fe-S subunit [Aeromonas veronii B565] Length = 221 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C++VCPV+ + + + ++ CI C +C CP AI+ Sbjct: 51 CRHCDDAPCIKVCPVEAIRQTGDCVQLNESLCIGCNLCAVACPFGAIQ 98 >gi|307594818|ref|YP_003901135.1| methyl-viologen-reducing hydrogenase subunit delta [Vulcanisaeta distributa DSM 14429] gi|307550019|gb|ADN50084.1| methyl-viologen-reducing hydrogenase delta subunit [Vulcanisaeta distributa DSM 14429] Length = 1226 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C CV+ CP I+P C CG C ECP A+ D + Sbjct: 1018 CVGCLL--CVKACPYGAIKGEPGKPVTINPAACQGCGSCVGECPYGALDMDLLSDDAILA 1075 Query: 68 KINSEYATQ 76 ++ + A + Sbjct: 1076 QVEAALAEE 1084 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 15/68 (22%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---------GENFLAIHPDE---CIDCGVCEPECPVDA 54 E CI CV+ CP+ E G +++ I P + C+ CG+CE CP +A Sbjct: 23 EMCIG--DELCVKRCPMG-ILELTREEVNPRGYHYVRIKPGKEVDCVACGICEKVCPTNA 79 Query: 55 IKPDTEPG 62 I + E Sbjct: 80 IYVEHEEE 87 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 + P +C+ C +C CP AIK + Sbjct: 1013 VDPGKCVGCLLCVKACPYGAIKGE 1036 Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 19/71 (26%), Gaps = 27/71 (38%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDEC------ 40 VT C C C VCPV E AI PD C Sbjct: 207 VTNECTKCGL--CEGVCPVVVPSEYNAGIGLRKAIYLPFPQAEPGIYAIDPDLCLNKPPE 264 Query: 41 -IDCGVCEPEC 50 I C C C Sbjct: 265 NIACNRCVSVC 275 >gi|212690609|ref|ZP_03298737.1| hypothetical protein BACDOR_00095 [Bacteroides dorei DSM 17855] gi|212666855|gb|EEB27427.1| hypothetical protein BACDOR_00095 [Bacteroides dorei DSM 17855] Length = 582 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 212 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 268 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 249 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 308 Query: 52 VDAIKP 57 AI Sbjct: 309 FGAIFE 314 >gi|268679442|ref|YP_003303873.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617473|gb|ACZ11838.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 199 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C +VCPVDCFY E+ + +H ++CI CG C CP A + + Sbjct: 57 ACMHCTDAPCEQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGAPQFPRDGAF 113 >gi|254488903|ref|ZP_05102108.1| iron-sulfur cluster-binding protein [Roseobacter sp. GAI101] gi|214045772|gb|EEB86410.1| iron-sulfur cluster-binding protein [Roseobacter sp. GAI101] Length = 650 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C+++CP +AI P C CG C CP AI D P L+ ++ Sbjct: 281 NCLDLCPTGAITSAGEHVAIDPLICAGCGSCSAVCPSGAITYDAPPVDTLFRRL 334 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP AI KP Sbjct: 497 VDTDACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANICPEQAITLKPQM 554 Query: 60 EPGLELWLKI 69 + ++ Sbjct: 555 NLTDAAFTQV 564 >gi|255322093|ref|ZP_05363240.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] gi|255300791|gb|EET80061.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] Length = 213 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C+ C+ C VCPVDCFY + + +H D CI CG C CP A + E Sbjct: 61 ACMHCEDAPCSLVCPVDCFYIRADGVVLHDKDICIGCGYCLYACPFGAPQFPRE 114 >gi|281422556|ref|ZP_06253555.1| conserved domain protein [Prevotella copri DSM 18205] gi|281403380|gb|EFB34060.1| conserved domain protein [Prevotella copri DSM 18205] Length = 55 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ ++CI C C++ CP EGE +I+PD C +CG C CP +AI Sbjct: 1 MAYVIGDDCIACG--TCIDECPSGAISEGE-KYSINPDLCTECGTCADVCPNEAI 52 >gi|34733215|gb|AAQ81583.1| formate dehydrogenase subunit B [Sulfurospirillum multivorans] Length = 200 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C +VCPVDCFY E+ + +H ++CI CG C CP A + + Sbjct: 57 ACMHCTDAPCEQVCPVDCFYIREDGIVLHDKEKCIGCGYCLYACPFGAPQFPRDGAF 113 >gi|296133064|ref|YP_003640311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031642|gb|ADG82410.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 368 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + CI C T C CP D E I ++CI CG C CP AI + + Sbjct: 190 VDADKCIGC--TKCTHWCPADAITVNEKVARISEEKCIGCGECTVTCPAHAIAINWKTDP 247 Query: 64 ELWLKINSEY 73 + + + EY Sbjct: 248 DDFQEKMVEY 257 >gi|119873478|ref|YP_931485.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674886|gb|ABL89142.1| formate dehydrogenase beta subunit [Pyrobaculum islandicum DSM 4184] Length = 278 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC+ C C CPV + I+ DEC+ CG C+ CP D K + Sbjct: 94 NCMHCVEAPCARACPVGAIKVTPEGAVVINRDECVGCGYCQMACPYDVPKRGDD 147 >gi|288930542|ref|YP_003434602.1| methyl-viologen-reducing hydrogenase subunit delta [Ferroglobus placidus DSM 10642] gi|288892790|gb|ADC64327.1| methyl-viologen-reducing hydrogenase delta subunit [Ferroglobus placidus DSM 10642] Length = 777 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV E CI C C EVC + I P+ C+ CGVC CP DAI Sbjct: 569 AYVNEEKCIGC--RICEEVCNFNAVTFENKKAKIDPNACVMCGVCAASCPADAI 620 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 19/79 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 YV C C DC VCPV+ E + AI + CI C Sbjct: 237 YVDENKCKGCID-DCSSVCPVEVPNEFDYTIGVRKAIYLPIPQSTPLYAAIDWEHCIGCR 295 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C A+ + +P Sbjct: 296 LCEKACEPKAVDFNQKPED 314 >gi|150002944|ref|YP_001297688.1| putative hydrogenase [Bacteroides vulgatus ATCC 8482] gi|149931368|gb|ABR38066.1| putative hydrogenase [Bacteroides vulgatus ATCC 8482] Length = 583 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 212 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 268 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 249 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 308 Query: 52 VDAIKP 57 AI Sbjct: 309 FGAIFE 314 >gi|22124776|ref|NP_668199.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis KIM 10] gi|45440219|ref|NP_991758.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Microtus str. 91001] gi|108808811|ref|YP_652727.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Antiqua] gi|108810934|ref|YP_646701.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|145600291|ref|YP_001164367.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides F] gi|153947293|ref|YP_001402217.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|153997629|ref|ZP_02022729.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CA88-4125] gi|162418201|ref|YP_001605488.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Angola] gi|165925705|ref|ZP_02221537.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936633|ref|ZP_02225200.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166010127|ref|ZP_02231025.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213010|ref|ZP_02239045.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399468|ref|ZP_02304992.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421626|ref|ZP_02313379.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423573|ref|ZP_02315326.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467625|ref|ZP_02332329.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis FV-1] gi|170025608|ref|YP_001722113.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis YPIII] gi|186894170|ref|YP_001871282.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis PB1/+] gi|218930345|ref|YP_002348220.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CO92] gi|229838947|ref|ZP_04459106.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896427|ref|ZP_04511595.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides A] gi|229899514|ref|ZP_04514655.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. India 195] gi|229901149|ref|ZP_04516272.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|270489331|ref|ZP_06206405.1| dimethylsulfoxide reductase, chain B [Yersinia pestis KIM D27] gi|294505035|ref|YP_003569097.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Z176003] gi|5002127|gb|AAD37318.1|AF135170_9 dimethyl sulfoxide reductase subunit B [Yersinia pestis] gi|21957598|gb|AAM84450.1|AE013689_5 anaerobic dimethyl sulfoxide reductase subunit B [Yersinia pestis KIM 10] gi|45435075|gb|AAS60635.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Microtus str. 91001] gi|108774582|gb|ABG17101.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|108780724|gb|ABG14782.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Antiqua] gi|115348956|emb|CAL21915.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CO92] gi|145211987|gb|ABP41394.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides F] gi|149289266|gb|EDM39346.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis CA88-4125] gi|152958788|gb|ABS46249.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|162351016|gb|ABX84964.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis Angola] gi|165915282|gb|EDR33892.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922317|gb|EDR39494.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991034|gb|EDR43335.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205797|gb|EDR50277.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960545|gb|EDR56566.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051972|gb|EDR63380.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057743|gb|EDR67489.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752142|gb|ACA69660.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis YPIII] gi|186697196|gb|ACC87825.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis PB1/+] gi|229681874|gb|EEO77967.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Nepal516] gi|229687006|gb|EEO79081.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. India 195] gi|229695313|gb|EEO85360.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700501|gb|EEO88532.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Pestoides A] gi|262363098|gb|ACY59819.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis D106004] gi|262367026|gb|ACY63583.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis D182038] gi|270337835|gb|EFA48612.1| dimethylsulfoxide reductase, chain B [Yersinia pestis KIM D27] gi|294355494|gb|ADE65835.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis Z176003] gi|320016518|gb|ADW00090.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 205 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D E Sbjct: 60 AYYLSIACNHCSDPACTKVCPSGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|309389388|gb|ADO77268.1| putative iron-sulfur protein [Halanaerobium praevalens DSM 2228] Length = 416 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E+CI C C++ CP+D + N + I D C+ CGVC CP A Sbjct: 290 ESCINCD--KCLDACPIDAITKNNNQIKIDQDICLGCGVCVRSCPTKA 335 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Query: 28 EGENFL-AIHPDECIDCGVCEPECPVDAI 55 E N+L ++ + CI+C C CP+DAI Sbjct: 279 ETTNYLPQLNYESCINCDKCLDACPIDAI 307 >gi|227143|prf||1615261A ferredoxin Length = 55 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + + C+ C C CPVD +G+ I D CIDCG C CPV A + Sbjct: 1 AYKILDTCVSCG--ACAAECPVDAISQGDTQFVIDADTCIDCGNCANVCPVGAPVQE 55 >gi|296132292|ref|YP_003639539.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296030870|gb|ADG81638.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 261 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C+ VC +N + I D CI C C CP AI D E G Sbjct: 73 CMHCTEASCMAVCAAGAISRADNGQVVIDRDTCIGCKNCVVACPFGAIGFDEETG 127 >gi|283786991|ref|YP_003366856.1| oxidoreductase [Citrobacter rodentium ICC168] gi|282950445|emb|CBG90107.1| putative oxidoreductase [Citrobacter rodentium ICC168] Length = 646 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 23/71 (32%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C CV CP N + + CI C C CP AI+ L Sbjct: 56 CRHCNDAPCVASCPTQALIFANNSVQLTEALCIGCKNCVIACPFGAIEMVANDDEAPLLA 115 Query: 69 INSEYATQWPN 79 + Q P+ Sbjct: 116 QKCDLCNQHPS 126 >gi|255067077|ref|ZP_05318932.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sicca ATCC 29256] gi|255048673|gb|EET44137.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sicca ATCC 29256] Length = 282 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C T C+ CPVD F+ + DEC CG+C P CPVD I D P + + Sbjct: 79 ACIGC--TACIRACPVDAIMGASKFMHTVISDECTGCGLCLPPCPVDCI--DMIPSEQEY 134 Query: 67 LKINSEYAT 75 L + Sbjct: 135 LPTARSLSR 143 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 75 IDEAACIGCTACIRACPVDAI 95 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C C+ CPVDC Sbjct: 102 MHTVISDECTGCGL--CLPPCPVDCI 125 >gi|188585177|ref|YP_001916722.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349864|gb|ACB84134.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 284 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y C+ C CV CP D Y+ + L I C++CG C CP +AIK D + Sbjct: 90 YFKKNACLHCNEASCVMACPADAIYKDDLGLTQIDNSICVNCGYCVSACPYNAIKYDRKK 149 Query: 62 G 62 G Sbjct: 150 G 150 >gi|218779004|ref|YP_002430322.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760388|gb|ACL02854.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 403 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC-PVDAI----KPD 58 V + CI C CVE+CP++ ++ I+ CI CG+C P+C AI + Sbjct: 290 VDADKCIGCNQ--CVEICPMEALSLVDDKAVINHTRCIGCGLCVPKCGKAKAISLKERYG 347 Query: 59 TEPGLELWLKINSEYATQWPNITTKKES 86 +P + L +E + I Sbjct: 348 HKPPSKDVLAYAAERIEELKGIQKSLLP 375 >gi|2127911|pir||B64333 formate hydrogenlyase, subunit 2 - Methanococcus jannaschii Length = 168 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C C EVCPV + ++ ++ D CI CG+C CP AI + + Sbjct: 48 CQHCASAPCKEVCPVSAIEHKDGYVYLNEDVCIGCGLCALACPFGAILMEDKA 100 >gi|261364486|ref|ZP_05977369.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria mucosa ATCC 25996] gi|288567418|gb|EFC88978.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria mucosa ATCC 25996] Length = 282 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C T C+ CPVD F+ + DEC CG+C P CPVD I D P + + Sbjct: 79 ACIGC--TACIRACPVDAIMGASKFMHTVISDECTGCGLCLPPCPVDCI--DMIPSEKEY 134 Query: 67 LKINSEYAT 75 L + Sbjct: 135 LPAARSLSR 143 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 75 IDEAACIGCTACIRACPVDAI 95 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C C+ CPVDC Sbjct: 102 MHTVISDECTGCGL--CLPPCPVDCI 125 >gi|257065142|ref|YP_003144814.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792795|gb|ACV23465.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 207 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V+ +C C + C++VCP ++ +N ++ + CI CG C CP +A K D E Sbjct: 62 YYVSTSCQHCGNPACIKVCPTGAMHKEDNGAVLVNTERCIGCGYCHLSCPYNAPKVDREA 121 Query: 62 GL 63 G Sbjct: 122 GH 123 >gi|310658331|ref|YP_003936052.1| iron-sulfur-binding protein [Clostridium sticklandii DSM 519] gi|308825109|emb|CBH21147.1| putative iron-sulfur-binding protein [Clostridium sticklandii] Length = 340 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 19/122 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ + CI C CV+ C V+ E + IH ++C+ C C CPV AI D Sbjct: 185 VIEKKCISCGL--CVKKCDVEAI-EMKEKAFIHSEKCVGCAGCIAVCPVGAIVNDW--SE 239 Query: 64 ELWLKINSEYA------------TQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + + +EYA T NIT + + + MD V + S +P Sbjct: 240 VNFKEKLAEYAYAAQKDKDNVYITYLINITKECDCMGQH--MDEVASDIGVFISKDPVAI 297 Query: 112 NT 113 +T Sbjct: 298 DT 299 >gi|83312388|ref|YP_422652.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82947229|dbj|BAE52093.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 242 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 TYV+ C C CV VCPV F + + + + D C+ C C CP DA Sbjct: 90 TYVLPRLCNHCSDPPCVGVCPVGATFQQKDGAVMVDSDRCVGCAYCVQACPYDA 143 >gi|291523456|emb|CBK81749.1| Iron only hydrogenase large subunit, C-terminal domain [Coprococcus catus GD/7] Length = 487 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 22/57 (38%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT NC +C C+ C I +C +CG C CP +AI P Sbjct: 98 VTNNCQMCMAKKCLGACNFGAIKFEGGHAVIDHKKCKECGKCAEACPYNAIADLMRP 154 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 15 TDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C CPVD E N + I+ ++CI+CG C CP A Sbjct: 153 RPCKRSCPVDAITMDEDNIVVINEEKCINCGQCVINCPFGA 193 >gi|150388648|ref|YP_001318697.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948510|gb|ABR47038.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 56 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + E+CI C C CPVD G++ I D CIDCG C CP DA +P Sbjct: 1 MAYKINESCINCG--ACEPECPVDVITAGDDIYVIEEDGCIDCGACANVCPTDAPQP 55 >gi|259416523|ref|ZP_05740443.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] gi|259347962|gb|EEW59739.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] Length = 667 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++ CP + +AI P C CG C CP AI D P L+L++ Sbjct: 292 RQTGCTRCLDACPTGAITPNGDSVAIDPMICAGCGACASLCPSSAITYDAPPAESLFLRV 351 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 V + C LC CV +CP + + L D C+ CG+C CP DAI + Sbjct: 514 VDQDACTLCL--SCVSLCPPGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAITYE 568 >gi|323484215|ref|ZP_08089584.1| hypothetical protein HMPREF9474_01335 [Clostridium symbiosum WAL-14163] gi|323692097|ref|ZP_08106344.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] gi|323402457|gb|EGA94786.1| hypothetical protein HMPREF9474_01335 [Clostridium symbiosum WAL-14163] gi|323503897|gb|EGB19712.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] Length = 368 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V+T+ CI C C C D E +I PD+C CG C CPVDA+ + Sbjct: 190 PFVLTDKCIGCG--ACKRNCAHDAISIAEKKASIAPDKCAGCGRCIGVCPVDAVANHCDE 247 Query: 62 GLELWLKINSEYA 74 ++ K +EY+ Sbjct: 248 SNDILNKKIAEYS 260 >gi|308051285|ref|YP_003914851.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] gi|307633475|gb|ADN77777.1| formate dehydrogenase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKP 57 ++ C+ C C++VCPV+ F + E+ + +H E CI CG C CP A + Sbjct: 53 ISVACMHCSDAPCMKVCPVNVFSKTEDGIVLHDKERCIGCGYCLYACPFGAPQF 106 >gi|218262081|ref|ZP_03476678.1| hypothetical protein PRABACTJOHN_02350 [Parabacteroides johnsonii DSM 18315] gi|218223610|gb|EEC96260.1| hypothetical protein PRABACTJOHN_02350 [Parabacteroides johnsonii DSM 18315] Length = 458 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C+ C T C+ CP E +I C+DCG C CP +AI + + +++ Sbjct: 15 DRCVGC--THCMTKCPTGAIRIREGKASIRKGWCVDCGECLKACPAEAIYVEQDDFQKIF 72 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D C+ C C +CP AI+ Sbjct: 10 LKIDNDRCVGCTHCMTKCPTGAIR 33 >gi|9651775|gb|AAF91267.1|AF230199_9 pyruvate oxidoreductase cysteine-rich subunit 2 [Methanococcus maripaludis] Length = 138 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C+ VCP D + + + +HP++C+ C +C CPV AI+ D Sbjct: 35 CMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQID 84 >gi|193083887|gb|ACF09566.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote KM3-72-G3] Length = 490 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C +CP + E+ + D CI C C CP DA+ D G Sbjct: 78 CNHCEDAPCTTICPTTALFTREDGIVDFDDDRCIGCKSCMQACPYDALYIDPNKG 132 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 23/70 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCG---------VCEPECPV 52 + CI CK C++ CP D L I P++ C C C CPV Sbjct: 108 DRCIGCK--SCMQACPYDA-------LYIDPNKGTAAKCNYCAHRIEHSYEPSCVVVCPV 158 Query: 53 DAIKPDTEPG 62 +AI Sbjct: 159 EAIISGDLDD 168 >gi|86140247|ref|ZP_01058808.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85823050|gb|EAQ43264.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 657 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C++ CP + ++I P C CG C CP AI D + +I Sbjct: 289 CLDHCPTSAISSAGDHVSIDPMICAGCGACAALCPSGAITYDAPATDAQFRRI 341 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V ++C LC CV +CP + + L + C+ CG+C CP DAI + Sbjct: 504 VDQDSCTLCL--SCVSLCPSGALGDNPDLPQLRFQEEACLQCGICANTCPEDAISFEPRL 561 Query: 62 GLEL 65 L+ Sbjct: 562 NLDP 565 Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 14/51 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---------FLAIHPDE---CIDCGV 45 E C+ C C CP D + +H +E C++CG Sbjct: 538 EACLQCG--ICANTCPEDAISFEPRLNLDPVALSQVVLHEEEPFACVECGA 586 >gi|296272511|ref|YP_003655142.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296096685|gb|ADG92635.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 199 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEP 61 Y ++ C+ C C +VCPVDCFY E+ + +H +CI CG C CP A + + Sbjct: 53 YSLSIACMHCTDAPCEKVCPVDCFYIREDGIVLHDKHKCIGCGYCLYACPFGAPQFPRDG 112 Query: 62 GLELWLKIN 70 +++ Sbjct: 113 AFGTKGEMD 121 >gi|224437316|ref|ZP_03658288.1| putative formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] Length = 211 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 66 ISIACMHCADAPCAKVCPVDCFYIRADGIVLHNKKTCIGCGYCLYACPFGAPQF 119 >gi|134045120|ref|YP_001096606.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662745|gb|ABO34391.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 167 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C+EVCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAIY 91 >gi|15668439|ref|NP_247237.1| carbon monoxide dehydrogenase iron sulfur subunit CooF2 [Methanocaldococcus jannaschii DSM 2661] gi|37078241|sp|Q57713|FER9_METJA RecName: Full=Uncharacterized ferredoxin MJ0265 gi|2826268|gb|AAB98252.1| carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF2) [Methanocaldococcus jannaschii DSM 2661] Length = 166 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C C EVCPV + ++ ++ D CI CG+C CP AI + + Sbjct: 46 CQHCASAPCKEVCPVSAIEHKDGYVYLNEDVCIGCGLCALACPFGAILMEDKA 98 >gi|150402671|ref|YP_001329965.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033701|gb|ABR65814.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 167 Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C+EVCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAIY 91 >gi|157164783|ref|YP_001467446.1| cytoplasmic membrane protein [Campylobacter concisus 13826] gi|112800981|gb|EAT98325.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] Length = 213 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C+ C VCPVDCFY + + +H D CI CG C CP A + + Sbjct: 61 ACMHCEDAPCSLVCPVDCFYIRADGIVLHDKDICIGCGYCLYACPFGAPQFPKDGAF 117 >gi|71279765|ref|YP_268923.1| electron transport complex protein RnfB [Colwellia psychrerythraea 34H] gi|71145505|gb|AAZ25978.1| electron transport complex, RnfABCDGE type, B subunit [Colwellia psychrerythraea 34H] Length = 189 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V+ E+CI C T C++ CPVD + I DEC C +C CPVD I+ Sbjct: 112 AFVIEEDCIGC--TKCIQACPVDAIIGAAKQMHTIIIDECTGCDLCVAPCPVDCIEMREL 169 Query: 61 PG 62 P Sbjct: 170 PD 171 >gi|313672609|ref|YP_004050720.1| tetrathionate reductase beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939365|gb|ADR18557.1| tetrathionate reductase beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 217 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C++ CV+ CPV+ Y+G + L I + CI CG C CP +A D Sbjct: 92 CNHCENPPCVKPCPVNATYKGPDGLVVIDDNVCIGCGKCVKACPYNARFLD 142 >gi|317131978|ref|YP_004091292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ethanoligenens harbinense YUAN-3] gi|315469957|gb|ADU26561.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ethanoligenens harbinense YUAN-3] Length = 368 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V TE C+ C C + C D +I + C+ CG C CP DA++ + Sbjct: 190 PHVHTEKCVGCG--TCRKQCAHDAITLTGGKASIDHNRCVGCGRCIGACPTDAVEAPIDE 247 Query: 62 GLELWLKINSEYAT-QWPNITTK 83 ++ +N + A W + + Sbjct: 248 ANDI---LNCKMAEYTWAVLHGR 267 >gi|224541365|ref|ZP_03681904.1| hypothetical protein CATMIT_00525 [Catenibacterium mitsuokai DSM 15897] gi|224525699|gb|EEF94804.1| hypothetical protein CATMIT_00525 [Catenibacterium mitsuokai DSM 15897] Length = 345 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ CI C C +CP C + I +C+ CG C CPV AI+ Sbjct: 144 YTITDRCIHCG--KCETICPQRCIHN----EVIDVAQCLHCGACLEICPVQAIEF 192 >gi|150399562|ref|YP_001323329.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012265|gb|ABR54717.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 140 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C+ C+ CP D + ++ + ++P++CI C +C CPV AI Sbjct: 31 IPLRCMHCEDAPCIFACPKDAITKIDDKVVLNPEKCIGCALCIEACPVGAI 81 >gi|312879271|ref|ZP_07739071.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] gi|310782562|gb|EFQ22960.1| NADH dehydrogenase (quinone) [Aminomonas paucivorans DSM 12260] Length = 621 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E+C+ C C CPV E ++ P CI CG C CP A+ P + G Sbjct: 561 VTPESCVGCG--ACKRACPVGAISGETRQAHSVDPTACIGCGACLDTCPFGALSPAPKEG 618 >gi|254361807|ref|ZP_04977942.1| tetrathionate reductase subunit B [Mannheimia haemolytica PHL213] gi|261491590|ref|ZP_05988173.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494950|ref|ZP_05991419.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093342|gb|EDN74338.1| tetrathionate reductase subunit B [Mannheimia haemolytica PHL213] gi|261309359|gb|EEY10593.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312716|gb|EEY13836.1| tetrathionate reductase subunit B [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 242 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 V+ C C CV VCPV F + + I+ ++CI CG C CP DA I +T+ Sbjct: 93 VLPRLCNHCDQPPCVPVCPVQATFQRKDGVVVINNEQCIGCGYCVQACPYDARFINEETK 152 Query: 61 PGLE 64 + Sbjct: 153 TADK 156 >gi|307719056|ref|YP_003874588.1| hypothetical protein STHERM_c13750 [Spirochaeta thermophila DSM 6192] gi|306532781|gb|ADN02315.1| hypothetical protein STHERM_c13750 [Spirochaeta thermophila DSM 6192] Length = 595 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY + + CI C C CPV+ E + I D+CI CG C C +AI+ Sbjct: 539 TYTILPDKCIGCGV--CARRCPVNAITGERKQPHVIDQDKCIKCGACYEACKFNAIE 593 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEP----GLELWLKINSEYATQWPNITTKK 84 I PD+CI CGVC CPV+AI + + + +K + Y N K+ Sbjct: 540 YTILPDKCIGCGVCARRCPVNAITGERKQPHVIDQDKCIKCGACYEACKFNAIEKR 595 >gi|317133102|ref|YP_004092416.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ethanoligenens harbinense YUAN-3] gi|315471081|gb|ADU27685.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ethanoligenens harbinense YUAN-3] Length = 56 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + CI C C CPV C EG+ I C+DCG C CPV A K Sbjct: 1 MAYKIGSECISCG--ACASECPVSCISEGDGIYVIDEATCVDCGTCATVCPVAAPKQ 55 >gi|119995|sp|P07508|FER_CLOTM RecName: Full=Ferredoxin gi|225169|prf||1210220A ferredoxin Length = 55 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ CI C C CPV G++ I D CI+CG C CPVDA + Sbjct: 1 AYFITDACISCG--ACESECPVSPISPGDSVYVIDADACIECGACANVCPVDAPQQ 54 >gi|291286072|ref|YP_003502888.1| Electron transfer flavoprotein alpha subunit [Denitrovibrio acetiphilus DSM 12809] gi|290883232|gb|ADD66932.1| Electron transfer flavoprotein alpha subunit [Denitrovibrio acetiphilus DSM 12809] Length = 440 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK-PDTEPGLE 64 + CI C C CPVD +N I+ ++CI C C CP DAI TE + Sbjct: 16 DTCIACGAR-CESACPVDAVTMDDNESPIINEEKCIGCVKCVKVCPADAIFMYFTEEEQK 74 Query: 65 LWLKINSEYAT 75 + ++ A Sbjct: 75 ILAELEKAGAE 85 Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 37 PDECIDCGV-CEPECPVDAIKPDTEPG 62 PD CI CG CE CPVDA+ D Sbjct: 15 PDTCIACGARCESACPVDAVTMDDNES 41 >gi|303243653|ref|ZP_07329994.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485895|gb|EFL48818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 256 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI C CV+ CPV+ E + + I+ CI CG CE CPV AI+ Sbjct: 196 VDNDTCIKCL--SCVDECPVNAIKEIKEGVEINKSSCIFCGRCEKVCPVHAIE 246 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 YV + CI C C E CPVD + I P++C+ C +C CPV+AI+ Sbjct: 42 YVFPKRCIRCGL--CYEECPVDAITKPSIRKPAEIIPEKCVKCEICAKTCPVNAIE 95 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ENCI C C CP + + ++ D C+ C CE CP IK E G Sbjct: 132 ENCIKCGV--CQRYCPTNAIHVVRRKSFDVNLDLCVGCKACENVCPKKVIKVQNELGEIP 189 Query: 66 W 66 + Sbjct: 190 F 190 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 28/79 (35%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--------------------------IHP 37 ++ E C+ C+ C + CPV+ E + I Sbjct: 74 IIPEKCVKCE--ICAKTCPVNAIEVLEGKVYLENEGVIYKLKETEIQHRTVRLVKYDIDL 131 Query: 38 DECIDCGVCEPECPVDAIK 56 + CI CGVC+ CP +AI Sbjct: 132 ENCIKCGVCQRYCPTNAIH 150 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 18/26 (69%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E ++ + P CI CG+C ECPVDAI Sbjct: 38 ERYIYVFPKRCIRCGLCYEECPVDAI 63 >gi|168182073|ref|ZP_02616737.1| [Fe] hydrogenase [Clostridium botulinum Bf] gi|182674775|gb|EDT86736.1| [Fe] hydrogenase [Clostridium botulinum Bf] Length = 497 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|78777018|ref|YP_393333.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] gi|78497558|gb|ABB44098.1| Formate dehydrogenase beta subunit [Sulfurimonas denitrificans DSM 1251] Length = 196 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C +VCPVDCFY + + +H D+CI CG C CP A + + Sbjct: 60 ACMHCTDAPCQQVCPVDCFYIRADGIVLHDKDKCIGCGYCLFACPFGAPQFPQDGAF 116 >gi|67474180|ref|XP_652839.1| Fe-hydrogenase [Entamoeba histolytica HM-1:IMSS] gi|27652439|gb|AAO17820.1| putative long iron-dependent hydrogenase 2 [Entamoeba histolytica] gi|56469743|gb|EAL47464.1| Fe-hydrogenase, putative [Entamoeba histolytica HM-1:IMSS] Length = 504 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT+ C C C CP C GE+ I+ + CI CG C CP AI + P Sbjct: 113 YFVTQACEGCTSRPCSVNCPKKCISFGEDGRAVINQNNCIKCGRCYKFCPYGAIISKSVP 172 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 16/70 (22%) Query: 4 VVTEN-CILC--------------KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCE 47 V+ +N CI C K CV+ CP + + I ++CI+CG C Sbjct: 145 VINQNNCIKCGRCYKFCPYGAIISKSVPCVKACPCGAMLDSPEGVKTIDFEKCINCGGCM 204 Query: 48 PECPVDAIKP 57 CP AI P Sbjct: 205 RACPFGAILP 214 >gi|209694971|ref|YP_002262900.1| formate dehydrogenase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] gi|208008923|emb|CAQ79139.1| formate dehydrogenase iron-sulfur subunit [Aliivibrio salmonicida LFI1238] Length = 202 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C+ VCP DCF E+ + H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCMAVCPADCFEHTEDGIVRHNKDLCIGCGYCLFACPFGAPQFPKQGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|83589316|ref|YP_429325.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572230|gb|ABC18782.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 231 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 VVT C+ C C VCP + + + I +CI C C+ CP DA Sbjct: 53 VVTTQCMHCDDPPCARVCPTGATQKRPDGIVIVDESKCIGCRYCQSACPYDA 104 >gi|116750829|ref|YP_847516.1| cobyrinic acid a,c-diamide synthase [Syntrophobacter fumaroxidans MPOB] gi|116699893|gb|ABK19081.1| Cobyrinic acid a,c-diamide synthase [Syntrophobacter fumaroxidans MPOB] Length = 292 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C C +C D EGE + P C C VC CP +AI+ + Sbjct: 65 GERCTGCGV--CASLCRFDAIREGERGYTVDPIRCEGCKVCVAFCPAEAIRFELRHCGHW 122 Query: 66 WL 67 ++ Sbjct: 123 YV 124 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 35 IHPDECIDCGVCEPECPVDAIKP 57 I + C CGVC C DAI+ Sbjct: 63 IDGERCTGCGVCASLCRFDAIRE 85 >gi|296158465|ref|ZP_06841296.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. Ch1-1] gi|295891409|gb|EFG71196.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. Ch1-1] Length = 413 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C E CPVD +N + D C C C P CP AI K D Sbjct: 18 EICIRCN--TCEETCPVDAITHDDNNYVVKADICNGCMACVPPCPTGAIDNWRTVLKADA 75 Query: 60 EPGLELWL 67 P E + Sbjct: 76 YPIDEQFT 83 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 15 IDPEICIRCNTCEETCPVDAITHDDN 40 >gi|255322980|ref|ZP_05364116.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] gi|255299842|gb|EET79123.1| formate dehydrogenase iron-sulfur subunit [Campylobacter showae RM3277] Length = 186 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 T C C C +VCPVDCFY + + +H ++CI CG C CP A + + Sbjct: 53 TIACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGAPQFPRDGAF 111 >gi|154483804|ref|ZP_02026252.1| hypothetical protein EUBVEN_01508 [Eubacterium ventriosum ATCC 27560] gi|149735295|gb|EDM51181.1| hypothetical protein EUBVEN_01508 [Eubacterium ventriosum ATCC 27560] Length = 56 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ CI C C CPV + I D CI+CG C CP D+I D Sbjct: 1 MAYKITDGCIGCG--ACEGTCPVGAISNDGSVCVIDADTCIECGACAGACPTDSITLD 56 >gi|254451106|ref|ZP_05064543.1| iron-sulfur cluster-binding protein [Octadecabacter antarcticus 238] gi|198265512|gb|EDY89782.1| iron-sulfur cluster-binding protein [Octadecabacter antarcticus 238] Length = 649 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C+ VCP ++I P C CG C CP AI D ++ ++ Sbjct: 281 NCLNVCPTGAILSAGEVVSIDPLICAGCGACSAVCPSGAISYDAPTVDHIFRRL 334 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L C+ CG+C CP AI Sbjct: 496 VDTDACTLCL--ACVSLCPSGALGDNPDLPQLRFQESACLQCGLCANICPEKAI 547 >gi|15899475|ref|NP_344080.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus solfataricus P2] gi|13816091|gb|AAK42870.1| Molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus solfataricus P2] Length = 409 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 62 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 115 >gi|83855221|ref|ZP_00948751.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] gi|83843064|gb|EAP82231.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. NAS-14.1] Length = 650 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C+++CP +AI P C CG C CP AI D P L+ ++ Sbjct: 281 NCLDLCPTGAITSAGEHVAIDPMICAGCGSCSAVCPSGAITYDAPPVDTLFRRL 334 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP +AI KP Sbjct: 497 VDTDACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPENAITLKPQL 554 Query: 60 EPGLELWLKI 69 + + ++ Sbjct: 555 NLTAQAFTQV 564 >gi|271502701|ref|YP_003335727.1| glutamate synthase small subunit [Dickeya dadantii Ech586] gi|270346256|gb|ACZ79021.1| glutamate synthase, small subunit [Dickeya dadantii Ech586] Length = 667 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ + C +VCP ++ + + ++CI C C CP AI + + Sbjct: 56 CRHCEDSPCAKVCPTQALVRKQDGIQLIAEKCIGCKTCVLACPFGAISVENQA 108 >gi|238758248|ref|ZP_04619427.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia aldovae ATCC 35236] gi|238703578|gb|EEP96116.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia aldovae ATCC 35236] Length = 172 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 27 AYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDEA 86 Query: 61 PGL 63 G Sbjct: 87 KGH 89 >gi|83590718|ref|YP_430727.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573632|gb|ABC20184.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 176 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 25/70 (35%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C CPV + N + I+ D CI C C CP +I+ + Sbjct: 60 CRHCEDAPCARACPVGAITQKNNVVLINSDRCIGCKTCAIVCPFGSIELVYREKEHKVVA 119 Query: 69 INSEYATQWP 78 + P Sbjct: 120 HKCDLCEGRP 129 >gi|167750547|ref|ZP_02422674.1| hypothetical protein EUBSIR_01523 [Eubacterium siraeum DSM 15702] gi|167656473|gb|EDS00603.1| hypothetical protein EUBSIR_01523 [Eubacterium siraeum DSM 15702] Length = 495 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 Y VTE C C C +VC + E+ I +C++CG C CP AI Sbjct: 101 YDVTEACRGCIAHRCEDVCRMGAITFDEHQKAHIDKSKCVNCGQCAKVCPYGAI 154 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 22/76 (28%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--------------------FLAIHPDECI 41 ++ C+ C C +VCP E + I D+CI Sbjct: 132 AHIDKSKCVNCGQ--CAKVCPYGAILEFKRPCERACKIGAISRATDTSSAAAHIDNDKCI 189 Query: 42 DCGVCEPECPVDAIKP 57 CG C CP AI Sbjct: 190 SCGACVYTCPFGAISD 205 >gi|288800744|ref|ZP_06406201.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332205|gb|EFC70686.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str. F0039] Length = 55 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++ +C+ C C++ CPV+ EG +I+PD C +CG C CP ++I Sbjct: 1 MAYVISNDCVACG--TCIDECPVEAISEGS-IYSINPDACTECGSCAAVCPTESI 52 >gi|157165264|ref|YP_001466214.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] gi|112801511|gb|EAT98855.1| formate dehydrogenase iron-sulfur subunit [Campylobacter concisus 13826] Length = 186 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 T C C C +VCPVDCFY + + +H ++CI CG C CP A + + Sbjct: 53 TIACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGAPQFPKDGAF 111 >gi|83589885|ref|YP_429894.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572799|gb|ABC19351.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 56 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M++ +TE C+ C C + CP EGE+ I P+ C DCG C CP +AI + Sbjct: 1 MSHRITEECLACGV--CADECPNGAISEGEDKYEIDPELCTDCGTCMEACPNEAIVAE 56 >gi|308069431|ref|YP_003871036.1| Iron-sulfur protein [Paenibacillus polymyxa E681] gi|305858710|gb|ADM70498.1| Iron-sulfur protein [Paenibacillus polymyxa E681] Length = 216 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C++ C CPV + + + I + CI C C CP AI+ Sbjct: 92 CRHCENAPCAHACPVQAIRQEDGVVMIDEERCIGCTSCVLACPFGAIE 139 >gi|237796742|ref|YP_002864294.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] gi|229262438|gb|ACQ53471.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|78222278|ref|YP_384025.1| formate dehydrogenase beta subunit [Geobacter metallireducens GS-15] gi|78193533|gb|ABB31300.1| formate dehydrogenase beta subunit [Geobacter metallireducens GS-15] Length = 277 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F++ I + +CI C C CP K + Sbjct: 82 EMCMHCNDPACASVCPVGAFHKTPEGPVIYNAKKCIGCRFCMVACPFGVPKYE 134 >gi|83941743|ref|ZP_00954205.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] gi|83847563|gb|EAP85438.1| iron-sulfur cluster-binding protein [Sulfitobacter sp. EE-36] Length = 650 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +C+++CP +AI P C CG C CP AI D P L+ ++ Sbjct: 281 NCLDLCPTGAITSAGEHVAIDPMICAGCGSCSAVCPSGAITYDAPPVDTLFRRL 334 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI--KPDT 59 V T+ C LC CV +CP + + L D C+ CG+C CP DAI KP Sbjct: 497 VDTDACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCANVCPEDAITLKPQL 554 Query: 60 EPGLELWLKI 69 + + ++ Sbjct: 555 NLTAQAFTQV 564 >gi|163747832|ref|ZP_02155170.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] gi|161378904|gb|EDQ03335.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Oceanibulbus indolifex HEL-45] Length = 654 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 7/66 (10%) Query: 3 YVVTEN--CILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV TE C + T C+++CP + + + P C CG C CP AI Sbjct: 266 YVRTEPLLCAHSRAGQTGCTACLDLCPTGAIVPDGDHVTVDPMICAGCGACSSACPSGAI 325 Query: 56 KPDTEP 61 D P Sbjct: 326 SYDAPP 331 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 + C LC CV +CP + + L D C+ CG+CE CP DAI Sbjct: 505 DACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCEHICPEDAI 553 >gi|148381245|ref|YP_001255786.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|148290729|emb|CAL84860.1| putative iron-dependent hydrogenase [Clostridium botulinum A str. ATCC 3502] Length = 498 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 105 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 163 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 135 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 192 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 193 GACMAACPFGAISD 206 >gi|299143653|ref|ZP_07036733.1| conserved domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518138|gb|EFI41877.1| conserved domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 56 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y + ++CI C C CPVDC EG + +I+ D+CIDCG C CP A P+ Sbjct: 1 MAYQINDSCIACG--ACKPECPVDCISEG-DIYSINADQCIDCGSCAAVCPTGAPNPED 56 >gi|223040716|ref|ZP_03610984.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] gi|222878000|gb|EEF13113.1| formate dehydrogenase iron-sulfur subunit [Campylobacter rectus RM3267] Length = 186 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 T C C C +VCPVDCFY + + +H ++CI CG C CP A + + Sbjct: 53 TIACQHCTDAPCEQVCPVDCFYIRADGIVLHDKNKCIGCGYCLYACPFGAPQFPRDGAF 111 >gi|170758777|ref|YP_001788618.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] gi|169405766|gb|ACA54177.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 15 TDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKIN 70 C +VCP + I + CI+CG C CP AI + +L + Sbjct: 161 RPCKKVCPTGALEINPEDKRAMIEKENCINCGACMAACPFGAISDKSYIVNIAKLLKEKK 220 Query: 71 SEYATQWPNITTKKESLPSAAKMDGVKQKYEK 102 YA P IT + AK+ VK K Sbjct: 221 KVYAVVAPAITGQFGPQ---AKVGQVKNALTK 249 >gi|168179051|ref|ZP_02613715.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] gi|182670135|gb|EDT82111.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|315186947|gb|EFU20705.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Spirochaeta thermophila DSM 6578] Length = 595 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY + + CI C C CPV+ E + I D+CI CG C C +AI+ Sbjct: 539 TYTILPDKCIGCGV--CARRCPVNAISGERKQPHVIDQDKCIKCGACYEACKFNAIE 593 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEP----GLELWLKINSEYATQWPNITTKK 84 I PD+CI CGVC CPV+AI + + + +K + Y N K+ Sbjct: 540 YTILPDKCIGCGVCARRCPVNAISGERKQPHVIDQDKCIKCGACYEACKFNAIEKR 595 >gi|291530234|emb|CBK95819.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum 70/3] gi|291557046|emb|CBL34163.1| Iron only hydrogenase large subunit, C-terminal domain [Eubacterium siraeum V10Sc8a] Length = 495 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 Y VTE C C C +VC + E+ I +C++CG C CP AI Sbjct: 101 YDVTEACRGCIAHRCEDVCRMGAITFDEHQKAHIDKSKCVNCGQCAKVCPYGAI 154 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 22/76 (28%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--------------------FLAIHPDECI 41 ++ C+ C C +VCP E + I D+CI Sbjct: 132 AHIDKSKCVNCGQ--CAKVCPYGAILEFKRPCERACKIGAISRATDTSSAAAHIDNDKCI 189 Query: 42 DCGVCEPECPVDAIKP 57 CG C CP AI Sbjct: 190 SCGACVYTCPFGAISD 205 >gi|226327317|ref|ZP_03802835.1| hypothetical protein PROPEN_01184 [Proteus penneri ATCC 35198] gi|225204535|gb|EEG86889.1| hypothetical protein PROPEN_01184 [Proteus penneri ATCC 35198] Length = 188 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ +N + ++ CI C +C CP AI P Sbjct: 33 CRHCEDAPCARVCPVNAITHEDNMIFLNESLCIGCKLCGLVCPFGAITP 81 >gi|170756783|ref|YP_001782925.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] gi|169121995|gb|ACA45831.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMASCPFGAISD 205 >gi|51595156|ref|YP_069347.1| anaerobic dimethyl sulfoxide reductase, subunit B [Yersinia pseudotuberculosis IP 32953] gi|51588438|emb|CAH20046.1| anaerobic dimethyl sulfoxide reductase, subunit B [Yersinia pseudotuberculosis IP 32953] Length = 205 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ + F+ ++ D CI C C CP A + D E Sbjct: 60 AYYLSIACNHCSDPACTKVCPSGAMHKRNDGFVVVNEDICIGCRYCHMACPYGAPQYDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|304559052|gb|ADM41716.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Edwardsiella tarda FL6-60] Length = 655 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCP + + + + ++CI C C CP AI+ Sbjct: 33 CRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIE 80 >gi|257460010|ref|ZP_05625114.1| formate dehydrogenase iron-sulfur subunit [Campylobacter gracilis RM3268] gi|257442451|gb|EEV17590.1| formate dehydrogenase iron-sulfur subunit [Campylobacter gracilis RM3268] Length = 185 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C C C +VCPV CFY + + +H D+CI CG C CP A + + Sbjct: 56 ACQHCTDAPCAQVCPVQCFYIRTDGVVLHDKDKCIGCGYCLYACPFGAPQFPRDGAF 112 >gi|153932223|ref|YP_001385620.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|153936790|ref|YP_001389026.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] gi|152928267|gb|ABS33767.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|152932704|gb|ABS38203.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|289578042|ref|YP_003476669.1| NADH dehydrogenase (quinone) [Thermoanaerobacter italicus Ab9] gi|297544313|ref|YP_003676615.1| NADH dehydrogenase (quinone) [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527755|gb|ADD02107.1| NADH dehydrogenase (quinone) [Thermoanaerobacter italicus Ab9] gi|296842088|gb|ADH60604.1| NADH dehydrogenase (quinone) [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 596 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 Y+ + C C C + CPV+ I D+CI CG C +CP AI Sbjct: 542 YIDPDKCKGCG--ICAKNCPVNAISGKPRQPYVIDQDKCIKCGTCIEKCPFGAIY 594 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CPV+AI Sbjct: 530 CPAG-VCQALLRFYIDPDKCKGCGICAKNCPVNAI 563 >gi|222099632|ref|YP_002534200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga neapolitana DSM 4359] gi|221572022|gb|ACM22834.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga neapolitana DSM 4359] Length = 366 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVV E C+ C C + CPV I D+CI CG C C A+ P + Sbjct: 197 PYVVEEKCVACG--TCAKFCPVGAITVT-KVARIDYDKCIGCGQCIAMCSYGAMSPKWDS 253 Query: 62 GLELWLKINSEYAT 75 + K +EYA Sbjct: 254 STDSLSKKMAEYAK 267 >gi|171185513|ref|YP_001794432.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934725|gb|ACB39986.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 279 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC+ C C CPV + I DECI CG C+ CP D K + Sbjct: 94 NCMHCVEAPCARACPVGAIKVSPEGAVVIEKDECIGCGYCQMACPYDVPKRGDD 147 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 14/55 (25%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPV 52 + CI C + C CP D G++ +C C C CP Sbjct: 125 DECIGCGY--CQMACPYDVPKRGDDGKFY---KCTFCVDRIQNGREPACVEVCPT 174 >gi|154496907|ref|ZP_02035603.1| hypothetical protein BACCAP_01200 [Bacteroides capillosus ATCC 29799] gi|150273865|gb|EDN00978.1| hypothetical protein BACCAP_01200 [Bacteroides capillosus ATCC 29799] Length = 507 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VTE C C C EVCP D I D+CI CG C C AI P Sbjct: 117 VTEGCQGCLAHPCEEVCPKDAIKLDRYNGRSHIDQDKCIKCGRCADVCSYKAIIIQERP 175 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFY-EGENFLAIHPDECIDCGVC 46 +++ + CI C C C VD + + I D+C+ CG+C Sbjct: 147 SHIDQDKCIKCGRCADVCSYKAIIIQERPCAVACGVDAIHTDINGKAEIDYDKCVSCGMC 206 Query: 47 EPECPVDAI 55 CP AI Sbjct: 207 LVNCPFGAI 215 >gi|91784376|ref|YP_559582.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] gi|91688330|gb|ABE31530.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] Length = 413 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C E CPVD +N + D C C C P CP AI K D Sbjct: 18 EICIRCN--TCEETCPVDAITHDDNNYVVKADICNGCMACVPPCPTGAIDNWRTVLKADA 75 Query: 60 EPGLELWL 67 P E + Sbjct: 76 YPIDEQFT 83 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 15 IDPEICIRCNTCEETCPVDAITHDDN 40 >gi|310828219|ref|YP_003960576.1| 4Fe-4S ferredoxin [Eubacterium limosum KIST612] gi|308739953|gb|ADO37613.1| 4Fe-4S ferredoxin [Eubacterium limosum KIST612] Length = 262 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V+E+C C +CV VCPV ++ PD CI C C CPV+A K P L Sbjct: 182 VSEDCTQCG--ECVSVCPVAAINP-DDPTETDPDLCIRCCACVRICPVEARKFTAPPFLA 238 Query: 65 --LWLKINSEYATQWPNI 80 +L+ N + P I Sbjct: 239 TVQFLEGNFAGIYKKPEI 256 >gi|153938019|ref|YP_001392647.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|152933915|gb|ABS39413.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|295320632|gb|ADG01010.1| [Fe] hydrogenase [Clostridium botulinum F str. 230613] Length = 497 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|320184796|gb|EFW59587.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri CDC 796-83] Length = 222 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|310778429|ref|YP_003966762.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] gi|309747752|gb|ADO82414.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Ilyobacter polytropus DSM 2926] Length = 595 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y + + CI C T C VCPV+C + I CI CG C C AI Sbjct: 541 YSINDKCIGC--TACARVCPVNCIAGKVKEKHVIDQSVCIKCGACYSTCKFGAI 592 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP +I+ D+CI C C CPV+ I Sbjct: 530 CPAGA-CTDLLQYSIN-DKCIGCTACARVCPVNCI 562 >gi|156742845|ref|YP_001432974.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] gi|156234173|gb|ABU58956.1| cyclic nucleotide-binding protein [Roseiflexus castenholzii DSM 13941] Length = 482 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C C+ +CVE CP D ++ + D C CG C P CP DA+ Sbjct: 357 VANACRQCRVGAECVEACPEDAIVWNDSGALMITDACTGCGECVPACPYDAVH 409 >gi|57169093|ref|ZP_00368220.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter coli RM2228] gi|305432302|ref|ZP_07401465.1| formate dehydrogenase [Campylobacter coli JV20] gi|57019551|gb|EAL56242.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter coli RM2228] gi|304444650|gb|EFM37300.1| formate dehydrogenase [Campylobacter coli JV20] Length = 213 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCAIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|313143772|ref|ZP_07805965.1| formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] gi|313128803|gb|EFR46420.1| formate dehydrogenase iron-sulfur subunit [Helicobacter cinaedi CCUG 18818] Length = 204 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 ++ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 59 ISIACMHCADAPCAKVCPVDCFYIRADGIVLHNKKTCIGCGYCLYACPFGAPQF 112 >gi|167037865|ref|YP_001665443.1| NADH dehydrogenase (quinone) [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116282|ref|YP_004186441.1| NADH dehydrogenase (quinone) [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856699|gb|ABY95107.1| NADH dehydrogenase (quinone) [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929373|gb|ADV80058.1| NADH dehydrogenase (quinone) [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 596 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 Y+ + C C C + CPV+ I D+CI CG C +CP AI Sbjct: 542 YIDPDKCKGCG--ICAKNCPVNAISGKPRQPYVIDQDKCIKCGTCIEKCPFGAIY 594 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CPV+AI Sbjct: 530 CPAG-VCQALLRFYIDPDKCKGCGICAKNCPVNAI 563 >gi|297582883|ref|YP_003698663.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297141340|gb|ADH98097.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 286 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+ C C VCPV Y+ +N + + D CI C C CP A D Sbjct: 131 IARPCMHCDKPPCASVCPVRATYKADNGIVVQDNDRCIGCRYCMVACPYGARSFDFGEEY 190 Query: 64 ELWLKIN 70 E L N Sbjct: 191 EEILDAN 197 >gi|89894374|ref|YP_517861.1| hypothetical protein DSY1628 [Desulfitobacterium hafniense Y51] gi|219668800|ref|YP_002459235.1| electron transfer flavoprotein alpha/beta-subunit [Desulfitobacterium hafniense DCB-2] gi|89333822|dbj|BAE83417.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539060|gb|ACL20799.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfitobacterium hafniense DCB-2] Length = 428 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 16/105 (15%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-------D 53 M ++ CI C CV CP + G++ + + +C +CG C CP Sbjct: 1 MAVIIGPGCISCGL--CVGECPSEALELGDSGVVVDAGKCTECGDCVSVCPSNILSLPEG 58 Query: 54 AIKPDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMDGV 96 A K EP +E + P + K +P GV Sbjct: 59 AGKSAEEPKQTS-----TEPSPAAPGAKVEKKAAPVPGGDVWSGV 98 >gi|163857881|ref|YP_001632179.1| ferredoxin-NADP oxidoreductase [Bordetella petrii DSM 12804] gi|163261609|emb|CAP43911.1| ferredoxin-NADP oxidoreductase [Bordetella petrii] Length = 416 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D N + PD C C C P CP +I Sbjct: 18 EICIRCN--TCEETCPIDAITHDGNNYVVDPDICNGCMACVPPCPTGSI 64 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHD 38 >gi|154492142|ref|ZP_02031768.1| hypothetical protein PARMER_01774 [Parabacteroides merdae ATCC 43184] gi|154087367|gb|EDN86412.1| hypothetical protein PARMER_01774 [Parabacteroides merdae ATCC 43184] Length = 458 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C+ C T C+ CP E +I C+DCG C CP +AI + + +++ Sbjct: 15 DRCVGC--THCMTKCPTGAIRIREGKASIRKGWCVDCGECLKACPTEAIYVEQDDFQKIF 72 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I D C+ C C +CP AI+ Sbjct: 10 LKIDNDRCVGCTHCMTKCPTGAIR 33 >gi|146304360|ref|YP_001191676.1| thiamine pyrophosphate binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702610|gb|ABP95752.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Metallosphaera sedula DSM 5348] Length = 607 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 2 TYVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V + C C T C + CP + I+P +CI CG C P CP +AIK + Sbjct: 539 AVVNYDKCTGC--TICYDYFTCPA-ILKRSDKKAVINPQDCIGCGACVPVCPFNAIKLEG 595 Query: 60 EPGL 63 E + Sbjct: 596 EKPM 599 >gi|86157468|ref|YP_464253.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773979|gb|ABC80816.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 100 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 15/90 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE CI C C CP +G++ I+PD C +C C CPVD Sbjct: 1 MATFITEECINCG--ACEPECPNSAISQGDDIYVINPDLCTECVGFHGEEACAAVCPVDC 58 Query: 55 IKPD---TEPGLELWLKINSEYATQWPNIT 81 PD TE + + ++ AT P+ T Sbjct: 59 CVPDPNRTETEEQNY----AKLATIHPDKT 84 >gi|116623401|ref|YP_825557.1| cyclic nucleotide-binding protein [Candidatus Solibacter usitatus Ellin6076] gi|116226563|gb|ABJ85272.1| cyclic nucleotide-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 755 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++V +C C C+ CPV ++ + D CI CG C +CP I Sbjct: 509 FLVATSCRACMDPLCMTRCPVGSIRRKDSLDIVIEDWCIGCGNCAIDCPYGNI 561 >gi|157737738|ref|YP_001490421.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|157737750|ref|YP_001490434.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|315637769|ref|ZP_07892966.1| formate dehydrogenase [Arcobacter butzleri JV22] gi|157699592|gb|ABV67752.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|157699604|gb|ABV67764.1| formate dehydrogenase, iron-sulfur subunit FdhB [Arcobacter butzleri RM4018] gi|315477939|gb|EFU68675.1| formate dehydrogenase [Arcobacter butzleri JV22] Length = 197 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 C+ C C +VCP DCFY + + +H D+CI CG C CP A + Sbjct: 61 ACMHCADAPCQQVCPTDCFYIRTDGIVLHDKDKCIGCGYCLFACPFGAPQF 111 >gi|197117888|ref|YP_002138315.1| electron transfer flavoprotein subunit alpha [Geobacter bemidjiensis Bem] gi|197087248|gb|ACH38519.1| electron transfer flavoprotein, alpha subunit [Geobacter bemidjiensis Bem] Length = 442 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V+ CI C C CPVD E I +CI C C CP AI+ P Sbjct: 17 VLEGRCIACGAR-CQSACPVDAIQMNEAGEPVIDASKCIGCVKCVKVCPAQAIEMAFTPE 75 Query: 63 LE 64 + Sbjct: 76 EK 77 >gi|119719691|ref|YP_920186.1| thiamine pyrophosphate binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119524811|gb|ABL78183.1| indolepyruvate ferredoxin oxidoreductase, subunit iorA [Thermofilum pendens Hrk 5] Length = 623 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 3 YVVTENCILCKHTDCVE--VCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 YV E C+ C CV+ CP E+ + I P+ C+ CGVC CP AI P Sbjct: 564 YVDQERCVRCG--ICVDKFSCP--AIVREEDGRVVILPEVCVGCGVCATICPAKAIHP 617 >gi|307243643|ref|ZP_07525786.1| ferredoxin [Peptostreptococcus stomatis DSM 17678] gi|306493012|gb|EFM65022.1| ferredoxin [Peptostreptococcus stomatis DSM 17678] Length = 55 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV C EG + I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIKDSCIACG--ACAAECPVSCISEG-DIYTIDASACIDCGSCAGVCPVDAPQPE 55 >gi|51894277|ref|YP_076968.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] gi|51857966|dbj|BAD42124.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] Length = 149 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + E CI C T CV VCP + E + I P CIDC C CPV AI + Sbjct: 1 MPHYIDEKCIGC--TACVSVCPTEAISGERKQLHYIDPKLCIDCDACVRSCPVLAIADE 57 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF------LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +C C CV++CP DC + + + P+ C+ C CE C AI Sbjct: 80 SCSGCDF--CVDICPFDCLELAGDGPFFGTAVLVRPNACVGCKECEEVCAKGAIIVLAPD 137 Query: 62 GL 63 Sbjct: 138 EQ 139 >gi|300245949|gb|ADJ94032.1| putative benzoate-degrading protein BamI [Clostridia bacterium enrichment culture clone BF] Length = 365 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +C C CVEVCPV+ +F + CI CGVC P+CP +A Sbjct: 290 SCTGCG--ACVEVCPVNALTMEGDFPVVDEGWCIGCGVCIPKCPTEA 334 Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 13/37 (35%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 P D C CG C CPV+A+ + Sbjct: 273 PRDVLMATYFMRETDEGSCTGCGACVEVCPVNALTME 309 >gi|226950727|ref|YP_002805818.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] gi|226844550|gb|ACO87216.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] gi|322807610|emb|CBZ05185.1| periplasmic [Fe] hydrogenase [Clostridium botulinum H04402 065] Length = 497 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C+EVC I ++C +CG+C+ CP +AI P Sbjct: 104 FRVTEACRGCIQHRCMEVCSAKAMVRINGKSYIDQNKCRECGLCKKVCPYNAIVEVMRP 162 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 20/74 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDE---------CIDC 43 +Y+ C C C +VCP + E L I+PD+ CI+C Sbjct: 134 SYIDQNKCRECGL--CKKVCPYNAIVEVMRPCKKVCPTGALEINPDDKRAMIEKENCINC 191 Query: 44 GVCEPECPVDAIKP 57 G C CP AI Sbjct: 192 GACMAACPFGAISD 205 >gi|303236983|ref|ZP_07323558.1| ferredoxin [Prevotella disiens FB035-09AN] gi|302482848|gb|EFL45868.1| ferredoxin [Prevotella disiens FB035-09AN] Length = 55 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++ +CI C C++ CPV EG + I D C +CG C CP +AI Sbjct: 1 MAYVISNDCIACG--TCIDECPVGAISEG-DIYNIDADACTECGTCASVCPSEAI 52 >gi|268591053|ref|ZP_06125274.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291313858|gb|EFE54311.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 205 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ +C C+ CV+VCP ++ E+ F+ + CI C C CP A + D+E Sbjct: 60 SYYLSISCNHCEDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQFDSE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|225023979|ref|ZP_03713171.1| hypothetical protein EIKCOROL_00846 [Eikenella corrodens ATCC 23834] gi|224943004|gb|EEG24213.1| hypothetical protein EIKCOROL_00846 [Eikenella corrodens ATCC 23834] Length = 291 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + Y+ CI C T C++ CPVD + + DEC CG+C P CPVD I+ Sbjct: 74 LAYIDETACIGC--TACIKACPVDAILGASKLMHTVLADECTGCGLCLPPCPVDCIRMQP 131 Query: 60 EPGL 63 P Sbjct: 132 VPDA 135 >gi|218264316|ref|ZP_03478173.1| hypothetical protein PRABACTJOHN_03864 [Parabacteroides johnsonii DSM 18315] gi|218222117|gb|EEC94767.1| hypothetical protein PRABACTJOHN_03864 [Parabacteroides johnsonii DSM 18315] Length = 481 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D CI CG C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAEIDHDTCISCGKCHQNCPYHAIVY 169 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C EVCPV + E + I +CI CG C CP Sbjct: 150 DTCISCGKCHQNCPYHAIVYIPIPCEEVCPVKAISKDEYGVEHIDESKCIYCGKCVNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|121534183|ref|ZP_01666008.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307286|gb|EAX48203.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 193 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP YE + F+ I+ CI C VC CP AI Sbjct: 64 CRQCEDAPCAHACPTGAIYEEDRFVKINESNCIGCKVCTMVCPFGAI 110 >gi|15898912|ref|NP_343517.1| pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) [Sulfolobus solfataricus P2] gi|284173031|ref|ZP_06387000.1| pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) protein [Sulfolobus solfataricus 98/2] gi|1707734|emb|CAA69454.1| orf c01004 [Sulfolobus solfataricus P2] gi|13815423|gb|AAK42307.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (porD-like) [Sulfolobus solfataricus P2] gi|261603331|gb|ACX92934.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus solfataricus 98/2] Length = 363 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWVYCPDECFDETPDGYYDIAYDYCVGCGICAEVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + ++Y +W Sbjct: 326 DYRRPYEMWKEDKAKY-KEW 344 >gi|325677740|ref|ZP_08157388.1| ferredoxin [Ruminococcus albus 8] gi|324110563|gb|EGC04731.1| ferredoxin [Ruminococcus albus 8] Length = 56 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + ++CI C C+ CPV E + I C+DCG C CPV A + + Sbjct: 1 MAYKINDDCIGCG--ACMAECPVGAISEADGKCVIDASACLDCGACAGTCPVGAPQAE 56 >gi|11497774|ref|NP_068996.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|2650484|gb|AAB91070.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 180 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV CPV+ Y+ E L I + CI CG C CP A Sbjct: 57 CNHCDNPSCVHACPVNATYKTEEGLVLIDDEICIGCGACIQACPYGA 103 >gi|150388818|ref|YP_001318867.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948680|gb|ABR47208.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 226 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEP 61 ++ C C+ CV CPV+ Y+ +N + +H +E CI C CE CP I + E Sbjct: 54 ISTLCNHCEDAPCVTACPVNPKAMYKQDNGITMHDEETCIGCRACETACPYGVIYYNDEE 113 Query: 62 GLELW 66 W Sbjct: 114 PFGKW 118 >gi|325265960|ref|ZP_08132646.1| electron transport complex protein RnfB [Kingella denitrificans ATCC 33394] gi|324982598|gb|EGC18224.1| electron transport complex protein RnfB [Kingella denitrificans ATCC 33394] Length = 284 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ CI C T C+ CPVD + + DEC CG+C P CPVD I Sbjct: 73 AYIDEAVCIGC--TACIRACPVDAIMGASKLMHTVLADECTGCGLCVPPCPVDCI 125 >gi|145298799|ref|YP_001141640.1| hydrogenase 4 Fe-S subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142851571|gb|ABO89892.1| hydrogenase 4 Fe-S subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 231 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C++VCPV+ + + + ++ CI C +C CP AI+ Sbjct: 51 CRHCDDAPCIKVCPVEAIAQTGDCVQLNESLCIGCNLCAVACPFGAIQ 98 >gi|188587369|ref|YP_001918914.1| Indolepyruvate ferredoxin oxidoreductase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352056|gb|ACB86326.1| Indolepyruvate ferredoxin oxidoreductase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 612 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 YV CI C +CV+ CP E N I PD C+ C VC CPV+AI+ Sbjct: 546 YVNPNVCIGC--RNCVKTNCPPIKMTEYPNQDKLKSFIDPDVCVGCSVCSQVCPVEAIR 602 >gi|222054720|ref|YP_002537082.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221564009|gb|ACM19981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 55 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + +++ CI C C E CPV+ E + I D CIDCG C CPV AI Sbjct: 1 MAHKISDECINCG--ACDESCPVNAISEEGSKRTISADTCIDCGACVDTCPVSAI 53 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 16/21 (76%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 DECI+CG C+ CPV+AI + Sbjct: 7 DECINCGACDESCPVNAISEE 27 >gi|308049780|ref|YP_003913346.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307631970|gb|ADN76272.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 233 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGL 63 + C C + CVEVCP Y+ +N L +H +E CI C C CP I + Sbjct: 53 IPTLCNHCDNAACVEVCPTGAMYKADNGLTLHRNEDCIGCQRCVRACPYQVIGMNRSAPH 112 Query: 64 ELWLKINS 71 W + Sbjct: 113 RHWQDDEA 120 >gi|261601245|gb|ACX90848.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 398 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 51 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|160935395|ref|ZP_02082777.1| hypothetical protein CLOBOL_00290 [Clostridium bolteae ATCC BAA-613] gi|158441753|gb|EDP19453.1| hypothetical protein CLOBOL_00290 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y +T C C +C+ CP C + I + CI CG C CP A+ E G Sbjct: 173 YFITRQCRGCG--NCLSKCPQTCITTAQVPFEIQKEHCIRCGNCLEVCPFGAVVRREEDG 230 >gi|16272978|ref|NP_439205.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae Rd KW20] gi|145632412|ref|ZP_01788147.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 3655] gi|229843915|ref|ZP_04464056.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 6P18H1] gi|260580135|ref|ZP_05847965.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|1169361|sp|P45003|DMSB_HAEIN RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|1574080|gb|AAC22705.1| anaerobic dimethyl sulfoxide reductase, chain B (dmsB) [Haemophilus influenzae Rd KW20] gi|144987319|gb|EDJ93849.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 3655] gi|229812909|gb|EEP48597.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 6P18H1] gi|260093419|gb|EEW77352.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|301169793|emb|CBW29394.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae 10810] Length = 205 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|117920783|ref|YP_869975.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|146294906|ref|YP_001185330.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|33286385|gb|AAQ01673.1| ArrB [Shewanella sp. ANA-3] gi|117613115|gb|ABK48569.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] gi|145566596|gb|ABP77531.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 234 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 TY+ T C C CV+VCP ++ + L + + DECI C C CP I + Sbjct: 51 TYIPT-LCNHCDDAPCVKVCPTGAMHKDKRGLTLQNNDECIGCKKCMNACPYGVISFNAA 109 Query: 61 PGLELW 66 W Sbjct: 110 TPHRRW 115 >gi|330859342|emb|CBX69688.1| formate hydrogenlyase subunit 2 [Yersinia enterocolitica W22703] Length = 257 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ N + + CI C +C CP AI P Sbjct: 95 CRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 143 >gi|297617763|ref|YP_003702922.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145600|gb|ADI02357.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 354 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 8 NCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C C E CPV E+ ++ D CI CG+C +CP +AI E Sbjct: 276 ECIGCG--ICAEERCPVKAIEMIEDIAVLNNDRCIGCGLCVSKCPTNAISLVKRDDYEFP 333 Query: 67 LKINSEYATQ 76 + E + + Sbjct: 334 PETVRELSDR 343 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Query: 35 IHPDECIDCGVCEPE-CPVDAIK 56 I ECI CG+C E CPV AI+ Sbjct: 272 IDAPECIGCGICAEERCPVKAIE 294 >gi|154491696|ref|ZP_02031322.1| hypothetical protein PARMER_01307 [Parabacteroides merdae ATCC 43184] gi|154087937|gb|EDN86982.1| hypothetical protein PARMER_01307 [Parabacteroides merdae ATCC 43184] Length = 481 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D CI CG C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAEIDHDTCISCGKCHQNCPYHAIVY 169 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C EVCPV + E + I +CI CG C CP Sbjct: 150 DTCISCGKCHQNCPYHAIVYIPIPCEEVCPVKAISKDEYGVEHIDESKCIYCGKCVNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|261494021|ref|ZP_05990524.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496220|ref|ZP_05992626.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308172|gb|EEY09469.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310187|gb|EEY11387.1| electron transport complex protein RnfB [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 205 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 +V+ + CI C T C++ CPVD + I PD C C +C CP + I+ Sbjct: 109 AFVIEDLCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNCIEMRPI 166 Query: 60 EPGLELW 66 +P + W Sbjct: 167 KPTTQSW 173 >gi|159905555|ref|YP_001549217.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887048|gb|ABX01985.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 138 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C+ CP D + ++ + I P++CI C +C CPV AI D Sbjct: 35 CMHCEDAPCLNACPEDAIKKIDDKVVIEPEKCIGCALCAEVCPVGAIVID 84 >gi|32265726|ref|NP_859758.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter hepaticus ATCC 51449] gi|32261774|gb|AAP76824.1| Fe-S-cluster-containing formate dehydrogenase component 1 [Helicobacter hepaticus ATCC 51449] Length = 209 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 V+ C+ C C +VCPVDCFY + + +H CI CG C CP A + Sbjct: 63 VSIACMHCADAPCAKVCPVDCFYIRADGIVLHDKKTCIGCGYCLYACPFGAPQF 116 >gi|56477086|ref|YP_158675.1| formate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] gi|56313129|emb|CAI07774.1| Formate dehydrogenase iron-sulfur subunit [Aromatoleum aromaticum EbN1] Length = 201 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C+ VCP + Y E + +H D CI CG C CP A + P Sbjct: 54 ACMHCSDAPCIAVCPTNVIYHTEEGVVLHDKDGCIGCGYCFYACPFGAPQFPNGPAA 110 >gi|268610343|ref|ZP_06144070.1| hypothetical protein RflaF_12691 [Ruminococcus flavefaciens FD-1] Length = 205 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++CI C C+ CP C E + I + C+ CG C CPV A+ Sbjct: 153 YFVTDDCIRCG--SCLSDCPQSCI-ELKEKAVIRQENCLHCGNCAAVCPVGAV 202 >gi|171185318|ref|YP_001794237.1| thiamine pyrophosphate binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934530|gb|ACB39791.1| thiamine pyrophosphate protein domain protein TPP-binding [Thermoproteus neutrophilus V24Sta] Length = 590 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Query: 3 YVVTENCILC----KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V + C+ C C + P G+ I P C CG+C CP AIK + Sbjct: 525 WVDVDKCVGCSLCYGLLRCSAIAP-----RGDRKAYIDPALCTGCGMCAEVCPTGAIKGE 579 Query: 59 TEPGLELWLK 68 E LE+W + Sbjct: 580 RERWLEIWRQ 589 >gi|186476296|ref|YP_001857766.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phymatum STM815] gi|184192755|gb|ACC70720.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phymatum STM815] Length = 416 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D + + PD C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIDAIQHDDTNYVVMPDVCNGCMACVPPCPTGAI 64 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I P+ CI C CE CP+DAI+ D Sbjct: 15 IDPEICIRCNTCEETCPIDAIQHDD 39 >gi|298376335|ref|ZP_06986291.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] gi|298267372|gb|EFI09029.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] Length = 262 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 5 VTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VT+N C C++ CV+VCP + + P++CI C C ECP A DT Sbjct: 188 VTDNDLCTQCEY--CVDVCPTHAISLADEGMYSDPNQCIKCCACVKECPEGARTFDTP 243 >gi|332298379|ref|YP_004440301.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] gi|332181482|gb|AEE17170.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] Length = 56 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ C+ C C CPV E + I C+ CG C CP +AI + Sbjct: 1 MAYKITDACVNCG--SCEGECPVGAISEDGDKRVIDAASCVSCGTCAAACPTEAIVEE 56 >gi|317485201|ref|ZP_07944082.1| dimethylsulfoxide reductase [Bilophila wadsworthia 3_1_6] gi|316923492|gb|EFV44697.1| dimethylsulfoxide reductase [Bilophila wadsworthia 3_1_6] Length = 209 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C++ C E CP ++ EN + + PD C+ C CE CP A + D E Sbjct: 60 AYYVSLSCNHCENPVCAEACPTQAMHKDENGIVSVDPDRCVGCRYCEWNCPYGAPQFDPE 119 >gi|310777828|ref|YP_003966161.1| electron transport complex, RnfABCDGE type, B subunit [Ilyobacter polytropus DSM 2926] gi|309747151|gb|ADO81813.1| electron transport complex, RnfABCDGE type, B subunit [Ilyobacter polytropus DSM 2926] Length = 334 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C CV CPVD N I P++CI CG+C +CP +AI + + Sbjct: 217 ACIGCGV--CVRACPVDAIDLNNNLAKIDPEKCIQCGLCAIKCPTNAITSEVKE 268 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPVD + + I+ D+C+ C C ECP I Sbjct: 145 GYGDCAAVCPVDAITITDKGVAVINEDKCVSCEKCVKECPKRVI 188 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E CI C T C VCPVD E + + ++CI C +C +C AIK Sbjct: 274 IIEEKCIGC--TACARVCPVDAIEGEVKQKHKVIEEKCIGCQLCYEKCKFGAIK 325 >gi|307133273|ref|YP_003885289.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Dickeya dadantii 3937] gi|306530802|gb|ADN00733.1| Pyridine nucleotide-disulfide oxidoreductase family protein [Dickeya dadantii 3937] Length = 664 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ + C +VCP ++ + + ++CI C C CP AI +T+ Sbjct: 56 CRHCEDSPCAKVCPTQALVRKQDGIQLVAEKCIGCKTCVLACPFGAISVETQ 107 >gi|15603620|ref|NP_246694.1| DmsB [Pasteurella multocida subsp. multocida str. Pm70] gi|12722171|gb|AAK03839.1| DmsB [Pasteurella multocida subsp. multocida str. Pm70] Length = 206 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C + CV VCP ++ E+ I + CI C C CP DA + D Sbjct: 61 AYYLSISCNHCDNPACVSVCPTGAMHKTEDGFVIVNEAICIGCRYCHMACPYDAPQYD 118 >gi|145628000|ref|ZP_01783801.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.1-21] gi|145630136|ref|ZP_01785918.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|145634201|ref|ZP_01789912.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittAA] gi|145636509|ref|ZP_01792177.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittHH] gi|145638142|ref|ZP_01793752.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittII] gi|260581897|ref|ZP_05849693.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|319776718|ref|YP_004139206.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3047] gi|319897467|ref|YP_004135664.1| oxidoreductase, fe-s subunit [Haemophilus influenzae F3031] gi|329123894|ref|ZP_08252448.1| anaerobic dimethyl sulfoxide reductase subunit B [Haemophilus aegyptius ATCC 11116] gi|144979775|gb|EDJ89434.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.1-21] gi|144984417|gb|EDJ91840.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|145268645|gb|EDK08638.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittAA] gi|145270334|gb|EDK10269.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittHH] gi|145272471|gb|EDK12378.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittII] gi|260095090|gb|EEW78982.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|309751304|gb|ADO81288.1| Anaerobic dimethyl sulfoxide reductase, subunit B [Haemophilus influenzae R2866] gi|309973477|gb|ADO96678.1| Anaerobic dimethyl sulfoxide reductase, subunit B [Haemophilus influenzae R2846] gi|317432973|emb|CBY81342.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3031] gi|317451309|emb|CBY87547.1| oxidoreductase, Fe-S subunit [Haemophilus influenzae F3047] gi|327468501|gb|EGF13982.1| anaerobic dimethyl sulfoxide reductase subunit B [Haemophilus aegyptius ATCC 11116] Length = 205 Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|254361778|ref|ZP_04977913.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] gi|153093313|gb|EDN74309.1| NADH dehydrogenase (ubiquinone) [Mannheimia haemolytica PHL213] Length = 205 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 +V+ + CI C T C++ CPVD + I PD C C +C CP + I+ Sbjct: 109 AFVIEDLCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNCIEMRPI 166 Query: 60 EPGLELW 66 +P + W Sbjct: 167 KPTTQSW 173 >gi|238021504|ref|ZP_04601930.1| hypothetical protein GCWU000324_01404 [Kingella oralis ATCC 51147] gi|237868484|gb|EEP69490.1| hypothetical protein GCWU000324_01404 [Kingella oralis ATCC 51147] Length = 324 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CPVD + + DEC CG+C CPVD I Sbjct: 79 CIGC--TACIRACPVDAIMGASKQMHTVLADECTGCGLCVAPCPVDCIY 125 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 74 IDEAVCIGCTACIRACPVDAI 94 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE 30 M V+ + C C CV CPVDC Y Sbjct: 101 MHTVLADECTGCGL--CVAPCPVDCIYMRP 128 >gi|118443000|ref|YP_877778.1| hydrogenase (Fe) large chain [Clostridium novyi NT] gi|118133456|gb|ABK60500.1| hydrogenase (Fe) large chain [Clostridium novyi NT] Length = 443 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDA 54 + +TE C+ C T C VCPV C + I +C+ CG C CP+ A Sbjct: 27 FQITEKCVGC--TKCARVCPVSCISGKVKERHVIDTTKCVKCGQCISACPMGA 77 >gi|283833812|ref|ZP_06353553.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291070479|gb|EFE08588.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 205 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|256810831|ref|YP_003128200.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256794031|gb|ACV24700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 164 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C C EVCPV + ++ ++ + CI CG+C CP AI D + Sbjct: 44 CQHCASAPCKEVCPVSAIEHKDGYVYLNEEVCIGCGLCALACPFGAITLDDKA 96 >gi|318604983|emb|CBY26481.1| formate hydrogenlyase subunit 2 [Yersinia enterocolitica subsp. palearctica Y11] Length = 215 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ N + + CI C +C CP AI P Sbjct: 53 CRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 101 >gi|18312508|ref|NP_559175.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|4099070|gb|AAD00534.1| putative molybdopterin oxidoreductase iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|18159970|gb|AAL63357.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] Length = 214 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+ CP Y+ E+ L ++ D CI CG C CP A Sbjct: 81 FVPKQCNHCENAPCVKPCPTGATYKTEDGLVLVNDDLCIGCGACIQACPYGA 132 >gi|224367283|ref|YP_002601446.1| FdhB1 [Desulfobacterium autotrophicum HRM2] gi|223689999|gb|ACN13282.1| FdhB1 [Desulfobacterium autotrophicum HRM2] Length = 205 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C + CPVD + + + I CI C C CP AI+ Sbjct: 78 CRHCEDAPCAQSCPVDAICQVDGVILIDDKRCIGCKSCMMACPFGAIE 125 >gi|145640720|ref|ZP_01796303.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae R3021] gi|148828211|ref|YP_001292964.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittGG] gi|145274646|gb|EDK14509.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 22.4-21] gi|148719453|gb|ABR00581.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae PittGG] Length = 205 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|332161103|ref|YP_004297680.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665333|gb|ADZ41977.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 213 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ N + + CI C +C CP AI P Sbjct: 51 CRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 99 >gi|269122188|ref|YP_003310365.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] gi|268616066|gb|ACZ10434.1| NADH dehydrogenase (quinone) [Sebaldella termitidis ATCC 33386] Length = 614 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 YV+ CI C T C +CP C I ++CI CG C C AI D Sbjct: 560 YVINNKCIGC--TLCARICPESCITGSPKQRHYIDAEKCIKCGSCYEACKFHAINRD 614 >gi|227499381|ref|ZP_03929492.1| NADH dehydrogenase (ubiquinone) [Anaerococcus tetradius ATCC 35098] gi|227218585|gb|EEI83825.1| NADH dehydrogenase (ubiquinone) [Anaerococcus tetradius ATCC 35098] Length = 526 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y + E CI C C +CP E N I+ D+CI CG C+ CP+DAI Sbjct: 472 YDIGEACIGCG--KCKRLCPAQAISGEVRNKHEINQDKCIKCGQCKENCPIDAI 523 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 13/27 (48%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI CG C+ CP AI + E Sbjct: 476 EACIGCGKCKRLCPAQAISGEVRNKHE 502 >gi|167392731|ref|XP_001740273.1| hypothetical protein [Entamoeba dispar SAW760] gi|165895662|gb|EDR23298.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 504 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP C GE+ I+ ++CI CG C CP AI Sbjct: 113 YFVTQSCEGCTSRPCSVNCPKKCISFGEDGRALINQNDCIKCGRCFKFCPYGAI 166 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 15/65 (23%) Query: 8 NCILC--------------KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPV 52 +CI C K CV+ CP + + I ++CI+CG C CP Sbjct: 150 DCIKCGRCFKFCPYGAIIHKSIPCVKACPCGAMLDSPEGVKTIDFEKCINCGGCMRACPF 209 Query: 53 DAIKP 57 I P Sbjct: 210 GTILP 214 >gi|260881286|ref|ZP_05404060.2| putative 4Fe-4S binding domain protein [Mitsuokella multacida DSM 20544] gi|260849026|gb|EEX69033.1| putative 4Fe-4S binding domain protein [Mitsuokella multacida DSM 20544] Length = 206 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 Y V++ C+ C C+ VCP C GEN I C+ CG C CPV AI Sbjct: 150 YQVSKACVGC--RRCLSVCPQACITMGENDCAHIEDSHCLSCGRCAEVCPVQAIH 202 >gi|326791479|ref|YP_004309300.1| NADH dehydrogenase (quinone) [Clostridium lentocellum DSM 5427] gi|326542243|gb|ADZ84102.1| NADH dehydrogenase (quinone) [Clostridium lentocellum DSM 5427] Length = 595 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y +TE C C T C VCPV L I ++CI CG C +C AI + Sbjct: 541 YHITEQCKGC--TACARVCPVGAISGTVKALHTIDQEKCIKCGACMDKCKFAAIVRE 595 >gi|254458516|ref|ZP_05071941.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207084824|gb|EDZ62111.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 202 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 Y ++ C+ C C +VCP DCFY E+ + +H ++CI C C CP A + + Sbjct: 53 YSLSIACMHCTDAPCEQVCPTDCFYIREDGIVLHDKEKCIGCAYCLYACPFGAPQFPLDG 112 Query: 62 GL 63 Sbjct: 113 AF 114 >gi|229846080|ref|ZP_04466192.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 7P49H1] gi|229811084|gb|EEP46801.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 7P49H1] Length = 205 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|197286375|ref|YP_002152247.1| hydrogenase-4 component A [Proteus mirabilis HI4320] gi|227357429|ref|ZP_03841783.1| hydrogenase-4 component A [Proteus mirabilis ATCC 29906] gi|194683862|emb|CAR45000.1| hydrogenase-4 component A [Proteus mirabilis HI4320] gi|227162387|gb|EEI47387.1| hydrogenase-4 component A [Proteus mirabilis ATCC 29906] Length = 206 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ +N + ++ CI C +C CP AI P Sbjct: 51 CRHCEDAPCASVCPVNAITHEDNMIFLNESLCIGCKLCGLVCPFGAITP 99 >gi|77918293|ref|YP_356108.1| ferredoxin [Pelobacter carbinolicus DSM 2380] gi|77544376|gb|ABA87938.1| ferredoxin [Pelobacter carbinolicus DSM 2380] Length = 57 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 T+ +TE+CI C C +VCPVD E + C DCG C+ CPVDAIK D Sbjct: 3 THYITEDCINCG--ACADVCPVDAISEKGELHIVDQPTCTDCGACDEVCPVDAIKWD 57 >gi|288961311|ref|YP_003451650.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288913619|dbj|BAI75106.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 197 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPVD G + + + CI C +C CP AI P Sbjct: 51 CHQCEDAPCARVCPVDAITFGADAILLDEQTCIGCKMCALACPFGAITP 99 >gi|260434027|ref|ZP_05787998.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417855|gb|EEX11114.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 651 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C ++C+++CP + +AI P C CG C CP AI + P Sbjct: 277 VGC--SNCLDICPTGAITPAGDHVAIDPMVCAGCGECAALCPSTAISYEDPP 326 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEP 61 V TE C LC CV +CP + + ++ D C+ CG+C+ CP AI E Sbjct: 498 VDTEACTLCL--SCVSLCPSGALIDNPDLPQLNYQQDACLQCGLCKTICPESAITLVPEL 555 Query: 62 GLEL 65 L Sbjct: 556 DLSD 559 >gi|188587191|ref|YP_001918736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351878|gb|ACB86148.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 275 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y + C+ C C+ VCP Y E+ + D CI C C CP + I D Sbjct: 70 YFSKQGCMHCTDAGCLTVCPTGAIYRTESGTVNVDFDRCIGCNYCAANCPFNVISFD 126 >gi|121534846|ref|ZP_01666666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306641|gb|EAX47563.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 118 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y +T+NC C C+E CP G++ ++ D C CG CE CP AI +T+P Sbjct: 39 YFITKNCKKCD--ACLEHCPEGAVSAGKDGNIVN-DNCTGCGECEAVCPNGAIVRETDP- 94 Query: 63 LELWLKINSEY 73 + IN E Sbjct: 95 ---YRTINREM 102 >gi|68249608|ref|YP_248720.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 86-028NP] gi|68057807|gb|AAX88060.1| anaerobic dimethyl sulfoxide reductase chain B [Haemophilus influenzae 86-028NP] Length = 205 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|157157756|ref|YP_001462877.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|157079786|gb|ABV19494.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] Length = 205 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|307718915|ref|YP_003874447.1| hypothetical protein STHERM_c12330 [Spirochaeta thermophila DSM 6192] gi|306532640|gb|ADN02174.1| hypothetical protein STHERM_c12330 [Spirochaeta thermophila DSM 6192] Length = 527 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VTE C C C CP +I + CI+CG+CE CP AI Sbjct: 158 FMVTEVCQGCVARPCKTGCPRGAISIVRGRASIDYERCINCGLCERVCPFHAI 210 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 15/69 (21%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C EVCPV +GE+ +A I CI CG C CP Sbjct: 193 ERCINCGLCERVCPFHAIVRIPVPCEEVCPVGAIEKGEDGVARIDRGACILCGKCLKACP 252 Query: 52 VDAIKPDTE 60 A + ++ Sbjct: 253 FGAPQEQSD 261 >gi|257457555|ref|ZP_05622722.1| 4Fe-4S binding domain protein [Treponema vincentii ATCC 35580] gi|257444941|gb|EEV20017.1| 4Fe-4S binding domain protein [Treponema vincentii ATCC 35580] Length = 56 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +++ C+ C C CPV E I D CI CG C CP +AI Sbjct: 1 MAYKISDACVNCG--ACEGECPVGAISEANGARVIDADACISCGACAGVCPTEAI 53 >gi|57505242|ref|ZP_00371171.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Campylobacter upsaliensis RM3195] gi|315639207|ref|ZP_07894369.1| formate dehydrogenase, oxidoreductase [Campylobacter upsaliensis JV21] gi|57016378|gb|EAL53163.1| probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein [Campylobacter upsaliensis RM3195] gi|315480533|gb|EFU71175.1| formate dehydrogenase, oxidoreductase [Campylobacter upsaliensis JV21] Length = 213 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKP 57 +C+ C C VCPVDCFY + + +H E CI CG C CP A + Sbjct: 65 SCMHCDDAPCAIVCPVDCFYIRGDGVVLHDKEICIGCGYCLYACPFGAPQF 115 >gi|325971008|ref|YP_004247199.1| hypothetical protein SpiBuddy_1180 [Spirochaeta sp. Buddy] gi|324026246|gb|ADY13005.1| protein of unknown function DUF362 [Spirochaeta sp. Buddy] Length = 372 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + CI C C+++CP + + I P CI C C CP AI D Sbjct: 318 DPCIQC--RKCIDICPANALTMEHKRIIIDPSVCIRCYCCHEVCPASAIAVDE 368 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 13/27 (48%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 PD CI C C CP +A+ + + Sbjct: 314 VFLPDPCIQCRKCIDICPANALTMEHK 340 >gi|261867201|ref|YP_003255123.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412533|gb|ACX81904.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D11S-1] Length = 207 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP + + I + + CI C C CP DA + D E Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMQKNADGFVIVNEEICIGCRYCHMACPYDAPQFDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|302875114|ref|YP_003843747.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|307690260|ref|ZP_07632706.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|302577971|gb|ADL51983.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 630 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C T C CPV C + I ++CI CG C CPV AIK Sbjct: 576 YEITDECIGC--TKCSRACPVRCISGKIKGKHIIDQEKCIKCGTCFEGCPVKAIK 628 >gi|313905672|ref|ZP_07839033.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] gi|313469496|gb|EFR64837.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eubacterium cellulosolvens 6] Length = 206 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+NC C C+ VCP C I + C+ CG C CP A+ Sbjct: 153 YFVTDNCTGCG--SCLSVCPQSCIITTRIPYVIEQEHCLHCGNCLNTCPAGAV 203 >gi|310830102|ref|YP_003962459.1| Ferredoxin [Eubacterium limosum KIST612] gi|308741836|gb|ADO39496.1| Ferredoxin [Eubacterium limosum KIST612] Length = 56 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M Y +T+ CI C C + CPV+ EG I C DCG C +CPV+AI P+ Sbjct: 1 MAYKITDECIACG--SCADQCPVEAISEGS-IYEIDEALCTDCGACADQCPVEAIVPED 56 >gi|117927911|ref|YP_872462.1| putative glutamate synthase (NADPH) small subunit [Acidothermus cellulolyticus 11B] gi|117648374|gb|ABK52476.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidothermus cellulolyticus 11B] Length = 543 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 NC C +C VCP E + AI D C CG+C ECPV AI+ EPG E Sbjct: 484 NCFQCD--NCYAVCPDAAVLKVESGHGYAIDLDYCKGCGLCVAECPVGAIRTVPEPGTE 540 >gi|238919824|ref|YP_002933339.1| glutamate synthase family, small subunit, [Edwardsiella ictaluri 93-146] gi|238869393|gb|ACR69104.1| glutamate synthase family, small subunit, putative [Edwardsiella ictaluri 93-146] Length = 678 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCP + + + + ++CI C C CP AI+ Sbjct: 56 CRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIE 103 >gi|307594911|ref|YP_003901228.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Vulcanisaeta distributa DSM 14429] gi|307550112|gb|ADN50177.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Vulcanisaeta distributa DSM 14429] Length = 616 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--TE 60 YV + C C + CP E I P+ C+ C VC CP +AIKP+ + Sbjct: 549 YVDLDACKACGICYNLIACPAIVPLE-NRKAWIDPNMCVGCSVCAQVCPYNAIKPEGNVK 607 Query: 61 PGLELWLKI 69 L+ W ++ Sbjct: 608 DWLKKWAEM 616 >gi|269139126|ref|YP_003295827.1| putative oxidoreductase Fe-S binding subunit [Edwardsiella tarda EIB202] gi|267984787|gb|ACY84616.1| putative oxidoreductase Fe-S binding subunit [Edwardsiella tarda EIB202] Length = 678 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCP + + + + ++CI C C CP AI+ Sbjct: 56 CRHCEDAPCANVCPNGAIEKYNDSIQVRQEKCIGCKTCVVACPFGAIE 103 >gi|86607899|ref|YP_476661.1| transcriptional regulator PatB [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556441|gb|ABD01398.1| transcriptional regulator PatB [Synechococcus sp. JA-2-3B'a(2-13)] Length = 550 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M Y ++ NCI C CV+ CP + I+P C DC C CP A Sbjct: 1 MAYQISGNCIGCN--ACVDSCPTKAIVVQDGEYWINPLLCNDCEGFFPEPQCVSLCPGSA 58 Query: 55 IKP 57 +P Sbjct: 59 PQP 61 >gi|86606494|ref|YP_475257.1| transcriptional regulator PatB [Synechococcus sp. JA-3-3Ab] gi|86555036|gb|ABC99994.1| transcriptional regulator PatB [Synechococcus sp. JA-3-3Ab] Length = 550 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M Y ++ NCI C CV+ CP + I+P C DC C CP A Sbjct: 1 MAYQISGNCIGCN--ACVDSCPTKAIVVQDGEYWINPLLCNDCEGFFPEPQCVSLCPGSA 58 Query: 55 IKP 57 +P Sbjct: 59 PQP 61 >gi|323978273|gb|EGB73359.1| dimethylsulfoxide reductase [Escherichia coli TW10509] Length = 205 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|331660380|ref|ZP_08361315.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] gi|331052647|gb|EGI24683.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] Length = 205 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|123443013|ref|YP_001006988.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089974|emb|CAL12831.1| hydrogenase-4 component A [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 213 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ N + + CI C +C CP AI P Sbjct: 51 CRHCEDAWCARVCPVNAITLTNNAVELDETTCIGCKLCGIACPFGAITP 99 >gi|90411449|ref|ZP_01219460.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium profundum 3TCK] gi|90327662|gb|EAS44005.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium profundum 3TCK] Length = 204 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ C C C +VCP ++ E+ I D CI C CE CP A + + E Sbjct: 59 SYYLSIACNHCDEPACTKVCPSGAMHKREDGFVIVDEDVCIGCKYCEMACPYGAPQYNEE 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|330834494|ref|YP_004409222.1| putative pyruvate: ferredoxin oxidoreductase, alpha- and delta subunit [Metallosphaera cuprina Ar-4] gi|329566633|gb|AEB94738.1| putative pyruvate: ferredoxin oxidoreductase, alpha- and delta subunit [Metallosphaera cuprina Ar-4] Length = 605 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Query: 2 TYVVTENCILCKHTDCVE--VCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI--K 56 V +E C C T C + CP + EN I+ +ECI CG C P CP AI + Sbjct: 537 AVVDSERCTGC--TICYDHFTCP--AILKLENKKAVINQNECIGCGACVPVCPYKAITLE 592 Query: 57 PDTEPGLEL 65 + G + Sbjct: 593 GEKPEGWDE 601 >gi|315925900|ref|ZP_07922105.1| ferredoxin [Pseudoramibacter alactolyticus ATCC 23263] gi|315620721|gb|EFV00697.1| ferredoxin [Pseudoramibacter alactolyticus ATCC 23263] Length = 56 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +++ CI C C + CP + EG I D CIDCG C +CP+ AI P Sbjct: 1 MAYTISDECISCG--ACADQCPTEAISEGSP-YVIDADACIDCGSCADQCPMGAIAP 54 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 DECI CG C +CP +AI + Sbjct: 1 MAYTISDECISCGACADQCPTEAISEGSP 29 >gi|197120163|ref|YP_002140590.1| iron-sulfur cluster-binding sigma-54-dependent transcriptional regulator, FehydlgC/FeS domain-containing protein [Geobacter bemidjiensis Bem] gi|197089523|gb|ACH40794.1| iron-sulfur cluster-binding sigma-54-dependent transcriptional regulator, FehydlgC and FeS domain-containing protein [Geobacter bemidjiensis Bem] Length = 759 Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T++C C CV CPV +++ I + CI CG C CP A Sbjct: 6 TITDHCRKC--YSCVRSCPVKAIKVEKSYTEIIAERCIGCGNCMSHCPQHA 54 >gi|240948525|ref|ZP_04752898.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus minor NM305] gi|240297033|gb|EER47604.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus minor NM305] Length = 205 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ I + + CI C C CP DA + D + Sbjct: 60 AYYLSISCNHCSDPACTKVCPTGAMHKNEDGFVIVNEEICIGCRYCHMACPYDAPQYDAK 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|238784110|ref|ZP_04628124.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia bercovieri ATCC 43970] gi|238714956|gb|EEQ06954.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia bercovieri ATCC 43970] Length = 204 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 59 AYYLSIACNHCSDPACTKVCPSGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDET 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|315425433|dbj|BAJ47097.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Candidatus Caldiarchaeum subterraneum] Length = 223 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C+ CVEVCPV+ ++ N + + CI CG C CP A Sbjct: 90 FVPKMCNHCEEPSCVEVCPVNATFKAPNGEVLVDDNVCIGCGACIQNCPYGA 141 >gi|48675342|dbj|BAD22818.1| ferredoxin1 [Heliobacillus mobilis] Length = 55 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +++ C+ C CV+ CPV +G + I+ D CIDCG C CP AI Sbjct: 1 MAYKISDACVNCG--SCVDACPVGAIEKGSDIYCIN-DTCIDCGSCVDTCPAGAI 52 >gi|303244235|ref|ZP_07330572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485362|gb|EFL48289.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 170 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C EVCPV+ + + + +CI CG+C CP AI Sbjct: 44 CQHCASAPCKEVCPVEAIENKDGVIYLDESKCIGCGLCAMACPFGAI 90 >gi|167040762|ref|YP_001663747.1| NADH dehydrogenase (quinone) [Thermoanaerobacter sp. X514] gi|256750972|ref|ZP_05491855.1| NADH dehydrogenase (quinone) [Thermoanaerobacter ethanolicus CCSD1] gi|300914800|ref|ZP_07132116.1| NADH dehydrogenase [Thermoanaerobacter sp. X561] gi|307723966|ref|YP_003903717.1| NADH dehydrogenase (quinone) [Thermoanaerobacter sp. X513] gi|166855002|gb|ABY93411.1| NADH dehydrogenase (quinone) [Thermoanaerobacter sp. X514] gi|256750082|gb|EEU63103.1| NADH dehydrogenase (quinone) [Thermoanaerobacter ethanolicus CCSD1] gi|300889735|gb|EFK84881.1| NADH dehydrogenase [Thermoanaerobacter sp. X561] gi|307581027|gb|ADN54426.1| NADH dehydrogenase (quinone) [Thermoanaerobacter sp. X513] Length = 596 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ + C C C + CPV+ + + I D+CI CG C +CP AI Sbjct: 542 YIAPDKCKGCG--ICAKNCPVNAISGKTKEPYVIDQDKCIKCGTCIEKCPFGAIY 594 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CP + I PD+C CG+C CPV+AI T+ Sbjct: 530 CPAG-VCQALLRFYIAPDKCKGCGICAKNCPVNAISGKTKEP 570 >gi|327400962|ref|YP_004341801.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus veneficus SNP6] gi|327316470|gb|AEA47086.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus veneficus SNP6] Length = 753 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV TENCI C C EVC + E I + C CG C CPVDAI Sbjct: 552 AYV-TENCIGC--RLCAEVCRFNAVVIDERSGKAKIDANACAMCGACVAACPVDAIDMGF 608 Query: 60 EPGLELWLKINS 71 ++ +I++ Sbjct: 609 FSEEQITAEIDA 620 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 18/80 (22%) Query: 5 VTENCILCKHTDCVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPEC 50 V ENC C DC VCPVD F + AI + CI C +C C Sbjct: 235 VNENCKGCI-EDCSSVCPVDVFDGVGIRKAVYIPFPQATPLYAAIDWENCIRCELCVKAC 293 Query: 51 PVDAIKPDTEPGLELWLKIN 70 +AI D E + IN Sbjct: 294 KPNAI--DFNQKQEE-IDIN 310 >gi|323702453|ref|ZP_08114117.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfotomaculum nigrificans DSM 574] gi|323532592|gb|EGB22467.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfotomaculum nigrificans DSM 574] Length = 448 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 M V+ C+ C C+ CP + + +N + + D+C++CG C CPV+A Sbjct: 1 MAVNVSPACMGC--QACITTCPYEALFINDNGVCEVIKDKCVECGKCVEVCPVEA 53 >gi|282600017|ref|ZP_05972741.2| hydrogenase-4 component A [Providencia rustigianii DSM 4541] gi|282566781|gb|EFB72316.1| hydrogenase-4 component A [Providencia rustigianii DSM 4541] Length = 187 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP------DTEPG 62 C C C VCPV+ + + ++ CI C +C CP AI P D Sbjct: 33 CRQCDDAPCARVCPVNAITHENDMIVLNESLCIGCKLCGLVCPFGAITPSGSKPVDMPDF 92 Query: 63 LELWL 67 E ++ Sbjct: 93 FEQYV 97 >gi|333006115|gb|EGK25625.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-272] gi|333018950|gb|EGK38243.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-227] Length = 205 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|293391269|ref|ZP_06635603.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951803|gb|EFE01922.1| anaerobic dimethyl sulfoxide reductase chain B [Aggregatibacter actinomycetemcomitans D7S-1] Length = 205 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP + + I + + CI C C CP DA + D E Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMQKNADGFVIVNEEICIGCRYCHMACPYDAPQFDAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|126739780|ref|ZP_01755471.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126719012|gb|EBA15723.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 653 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 C++ CP + + I P C CG C CP AI D P L+L++ Sbjct: 281 CLDHCPTSAISPKGDHVTIDPMICAGCGACASLCPSGAITYDAPPASALFLRV 333 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 TE+C LC C +CP + + L D C+ CG+C CP AIK + Sbjct: 502 TESCTLCL--SCASLCPSGALGDNPDLPQLRFQEDACLQCGICANLCPEQAIKLE 554 >gi|188586058|ref|YP_001917603.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350745|gb|ACB85015.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 70 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + +TE CI C C++ CPVD EGE +I D C +CG C ECP DAI + Sbjct: 17 AFRITEECIACG--SCLDACPVDAIKEGEEIFSITED-CTECGSCVDECPTDAIVEE 70 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 15/23 (65%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 +ECI CG C CPVDAIK E Sbjct: 22 EECIACGSCLDACPVDAIKEGEE 44 >gi|320177371|gb|EFW52372.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella dysenteriae CDC 74-1112] Length = 205 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|288574184|ref|ZP_06392541.1| protein of unknown function DUF362 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569925|gb|EFC91482.1| protein of unknown function DUF362 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 372 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CILC CVE+CP D + L ++CI C C CP +AI+ Sbjct: 312 CILCG--RCVEICPADAITMRDRRLVFDYEKCIRCYCCHEMCPANAIR 357 >gi|152990320|ref|YP_001356042.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] gi|151422181|dbj|BAF69685.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] Length = 214 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C +CPV + EN + I + CI C C CP AI D E Sbjct: 57 CNHCEDAPCERICPVSALHYLENGIVNIDKERCIGCAGCMMACPYGAIYMDPE 109 >gi|225175583|ref|ZP_03729577.1| Electron transfer flavoprotein alpha/beta-subunit [Dethiobacter alkaliphilus AHT 1] gi|225168912|gb|EEG77712.1| Electron transfer flavoprotein alpha/beta-subunit [Dethiobacter alkaliphilus AHT 1] Length = 400 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++ + CI C+ C++ CP E ++ +A+ D+C CG C CP DAI+ + Sbjct: 5 IIVDECIGCE--ACIDACPFPGAVEMKDDVAVLTDKCTGCGACADACPSDAIEVEETE 60 >gi|134045121|ref|YP_001096607.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662746|gb|ABO34392.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 138 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C+ VCP D + ++ + I ++CI C +C CPV AI+ D Sbjct: 35 CMHCEDAPCLNVCPEDAIKKIDDKVVIESEKCIGCALCAEVCPVGAIQID 84 >gi|74312090|ref|YP_310509.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|73855567|gb|AAZ88274.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|323164414|gb|EFZ50217.1| dimethylsulfoxide reductase, chain B [Shigella sonnei 53G] Length = 205 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|282859228|ref|ZP_06268350.1| ferredoxin [Prevotella bivia JCVIHMP010] gi|282588047|gb|EFB93230.1| ferredoxin [Prevotella bivia JCVIHMP010] Length = 55 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CPV+ EG + +I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPVEAISEG-DIYSIDADACTECGTCASVCPNEAI 52 >gi|225175969|ref|ZP_03729961.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168557|gb|EEG77359.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 369 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C +C + C++ CP D E I D+CI CG C CP AIK + Sbjct: 191 VKGEGCKVC--STCLKWCPADAILIMEETAEIDHDKCIGCGECTVVCPTRAIKIQWKSET 248 Query: 64 ELWLKINSEYATQWPNITTK 83 + +EYA W I K Sbjct: 249 VDVQERMAEYA--WGAIKDK 266 >gi|161170223|gb|ABX59194.1| FeS cluster containing hydrogenase components 1 [uncultured marine group II euryarchaeote EF100_57A08] Length = 470 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + D CI C C CP DA+ D G Sbjct: 58 CNHCEDSPCTTICPTTALFTREDGIVDFDDDRCIGCKSCMQACPYDALYIDPNKG 112 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 23/70 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCG---------VCEPECPV 52 + CI CK C++ CP D L I P++ C C C CP Sbjct: 88 DRCIGCK--SCMQACPYDA-------LYIDPNKGTAAKCNYCAHRIEHSYEPACVIVCPT 138 Query: 53 DAIKPDTEPG 62 +AI Sbjct: 139 EAIVSGDLDD 148 >gi|45359066|ref|NP_988623.1| pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] gi|45047941|emb|CAF31059.1| conserved archaeal protein, pyruvate oxidoreductase-associated [Methanococcus maripaludis S2] Length = 167 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C+EVCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCMEVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAIY 91 >gi|309701815|emb|CBJ01127.1| putative anaerobic dimethyl sulfoxide reductase, Fe-S subunit [Escherichia coli ETEC H10407] Length = 205 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|332097983|gb|EGJ02956.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 155-74] Length = 184 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|30063104|ref|NP_837275.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|30041353|gb|AAP17082.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|281601024|gb|ADA74008.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Shigella flexneri 2002017] gi|313649044|gb|EFS13480.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2a str. 2457T] gi|332757173|gb|EGJ87511.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 4343-70] gi|332758411|gb|EGJ88732.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-671] gi|332766983|gb|EGJ97182.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2930-71] gi|333003851|gb|EGK23386.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-218] gi|333005235|gb|EGK24755.1| dimethylsulfoxide reductase, chain B [Shigella flexneri VA-6] gi|333017930|gb|EGK37235.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-304] Length = 205 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|289191965|ref|YP_003457906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938415|gb|ADC69170.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 164 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C C EVCPV + ++ ++ + CI CG+C CP AI + + Sbjct: 44 CQHCASAPCKEVCPVSAIEHKDGYVYLNEEICIGCGLCALACPFGAIIMEDKA 96 >gi|15802003|ref|NP_288024.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|15831549|ref|NP_310322.1| oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|16129547|ref|NP_416106.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|26247834|ref|NP_753874.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli CFT073] gi|82776844|ref|YP_403193.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|89108430|ref|AP_002210.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. W3110] gi|91210799|ref|YP_540785.1| Fe-S subunit oxidoreductase [Escherichia coli UTI89] gi|117623775|ref|YP_852688.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli APEC O1] gi|157161048|ref|YP_001458366.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|168750603|ref|ZP_02775625.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|168757500|ref|ZP_02782507.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|168763713|ref|ZP_02788720.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|168771685|ref|ZP_02796692.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|168775813|ref|ZP_02800820.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|168783406|ref|ZP_02808413.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|168789420|ref|ZP_02814427.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|168800843|ref|ZP_02825850.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|170020058|ref|YP_001725012.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|170081253|ref|YP_001730573.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|191165925|ref|ZP_03027762.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|193064916|ref|ZP_03045992.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|193066892|ref|ZP_03047861.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194426027|ref|ZP_03058583.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194436394|ref|ZP_03068495.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|195938978|ref|ZP_03084360.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EC4024] gi|208810651|ref|ZP_03252527.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208817045|ref|ZP_03258165.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208821725|ref|ZP_03262045.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209399816|ref|YP_002270660.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209918901|ref|YP_002292985.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE11] gi|215486764|ref|YP_002329195.1| oxidoreductase, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|217328606|ref|ZP_03444687.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218554156|ref|YP_002387069.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI1] gi|218558459|ref|YP_002391372.1| oxidoreductase, Fe-S subunit [Escherichia coli S88] gi|218689509|ref|YP_002397721.1| oxidoreductase, Fe-S subunit [Escherichia coli ED1a] gi|218695151|ref|YP_002402818.1| oxidoreductase, Fe-S subunit [Escherichia coli 55989] gi|218699845|ref|YP_002407474.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI39] gi|218705088|ref|YP_002412607.1| oxidoreductase, Fe-S subunit [Escherichia coli UMN026] gi|227886054|ref|ZP_04003859.1| oxidoreductase, Fe-S subunit [Escherichia coli 83972] gi|237705528|ref|ZP_04536009.1| dimethylsulfoxide reductase subunit [Escherichia sp. 3_2_53FAA] gi|238900804|ref|YP_002926600.1| oxidoreductase, Fe-S subunit [Escherichia coli BW2952] gi|253773455|ref|YP_003036286.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161650|ref|YP_003044758.1| oxidoreductase, Fe-S subunit [Escherichia coli B str. REL606] gi|254793206|ref|YP_003078043.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|256018219|ref|ZP_05432084.1| oxidoreductase, Fe-S subunit [Shigella sp. D9] gi|256022751|ref|ZP_05436616.1| oxidoreductase, Fe-S subunit [Escherichia sp. 4_1_40B] gi|260843893|ref|YP_003221671.1| oxidoreductase, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|260855390|ref|YP_003229281.1| oxidoreductase, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|260868080|ref|YP_003234482.1| oxidoreductase, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|261227967|ref|ZP_05942248.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261258299|ref|ZP_05950832.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291282721|ref|YP_003499539.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. CB9615] gi|293405090|ref|ZP_06649082.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1412] gi|293409899|ref|ZP_06653475.1| conserved hypothetical protein [Escherichia coli B354] gi|293414905|ref|ZP_06657548.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli B185] gi|293445963|ref|ZP_06662385.1| dimethyl sulfoxide reductase subunit YnfG [Escherichia coli B088] gi|298380736|ref|ZP_06990335.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1302] gi|301029227|ref|ZP_07192340.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|306813449|ref|ZP_07447639.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli NC101] gi|307138239|ref|ZP_07497595.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli H736] gi|307310841|ref|ZP_07590487.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|309788770|ref|ZP_07683366.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] gi|312966654|ref|ZP_07780874.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|312969603|ref|ZP_07783786.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|331642172|ref|ZP_08343307.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331647075|ref|ZP_08348169.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] gi|331652977|ref|ZP_08353982.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|331663058|ref|ZP_08363968.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331668261|ref|ZP_08369109.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331677447|ref|ZP_08378122.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331683095|ref|ZP_08383696.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332279270|ref|ZP_08391683.1| oxidoreductase [Shigella sp. D9] gi|77416847|sp|P0AAJ2|YNFG_ECOL6 RecName: Full=Probable anaerobic dimethyl sulfoxide reductase chain ynfG; AltName: Full=DMSO reductase iron-sulfur subunit ynfG gi|77416848|sp|P0AAJ1|YNFG_ECOLI RecName: Full=Probable anaerobic dimethyl sulfoxide reductase chain ynfG; AltName: Full=DMSO reductase iron-sulfur subunit ynfG gi|12515564|gb|AAG56576.1|AE005382_10 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|26108237|gb|AAN80439.1|AE016761_14 Probable anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli CFT073] gi|1742612|dbj|BAA15313.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K12 substr. W3110] gi|1787872|gb|AAC74661.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|13361761|dbj|BAB35718.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|81240992|gb|ABB61702.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|91072373|gb|ABE07254.1| Fe-S subunit oxidoreductase [Escherichia coli UTI89] gi|115512899|gb|ABJ00974.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli APEC O1] gi|157066728|gb|ABV05983.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|169754986|gb|ACA77685.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|169889088|gb|ACB02795.1| oxidoreductase, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|187768665|gb|EDU32509.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|188015250|gb|EDU53372.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|188999242|gb|EDU68228.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|189355556|gb|EDU73975.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|189359615|gb|EDU78034.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|189366172|gb|EDU84588.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|189370961|gb|EDU89377.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|189376913|gb|EDU95329.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|190904056|gb|EDV63768.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|192927403|gb|EDV82021.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|192959482|gb|EDV89916.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194416082|gb|EDX32348.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194424426|gb|EDX40412.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|208725167|gb|EDZ74874.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208731388|gb|EDZ80077.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208741848|gb|EDZ89530.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209161216|gb|ACI38649.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209770048|gb|ACI83336.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770050|gb|ACI83337.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770052|gb|ACI83338.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770054|gb|ACI83339.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209770056|gb|ACI83340.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209912160|dbj|BAG77234.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE11] gi|215264836|emb|CAS09221.1| oxidoreductase, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|217317953|gb|EEC26380.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218351883|emb|CAU97608.1| oxidoreductase, Fe-S subunit [Escherichia coli 55989] gi|218360924|emb|CAQ98496.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI1] gi|218365228|emb|CAR02949.1| oxidoreductase, Fe-S subunit [Escherichia coli S88] gi|218369831|emb|CAR17602.1| oxidoreductase, Fe-S subunit [Escherichia coli IAI39] gi|218427073|emb|CAR07952.2| oxidoreductase, Fe-S subunit [Escherichia coli ED1a] gi|218432185|emb|CAR13073.1| oxidoreductase, Fe-S subunit [Escherichia coli UMN026] gi|222033347|emb|CAP76088.1| anaerobic dimethyl sulfoxide reductase chain [Escherichia coli LF82] gi|226900285|gb|EEH86544.1| dimethylsulfoxide reductase subunit [Escherichia sp. 3_2_53FAA] gi|227836983|gb|EEJ47449.1| oxidoreductase, Fe-S subunit [Escherichia coli 83972] gi|238861969|gb|ACR63967.1| oxidoreductase, Fe-S subunit [Escherichia coli BW2952] gi|242377320|emb|CAQ32065.1| oxidoreductase, predicted Fe-S subunit, subunit of putative selenate reductase [Escherichia coli BL21(DE3)] gi|253324499|gb|ACT29101.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973551|gb|ACT39222.1| oxidoreductase, Fe-S subunit [Escherichia coli B str. REL606] gi|253977746|gb|ACT43416.1| oxidoreductase, Fe-S subunit [Escherichia coli BL21(DE3)] gi|254592606|gb|ACT71967.1| oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|257754039|dbj|BAI25541.1| oxidoreductase, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|257759040|dbj|BAI30537.1| oxidoreductase, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|257764436|dbj|BAI35931.1| oxidoreductase, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|260449289|gb|ACX39711.1| dimethylsulfoxide reductase, chain B [Escherichia coli DH1] gi|281178659|dbj|BAI54989.1| putative dimethyl sulfoxide reductase Fe-S subunit [Escherichia coli SE15] gi|290762594|gb|ADD56555.1| Probable anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. CB9615] gi|291322793|gb|EFE62221.1| dimethyl sulfoxide reductase subunit YnfG [Escherichia coli B088] gi|291427298|gb|EFF00325.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1412] gi|291432553|gb|EFF05532.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli B185] gi|291470367|gb|EFF12851.1| conserved hypothetical protein [Escherichia coli B354] gi|294491574|gb|ADE90330.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli IHE3034] gi|298278178|gb|EFI19692.1| anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli FVEC1302] gi|299877863|gb|EFI86074.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|305853194|gb|EFM53634.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli NC101] gi|306909019|gb|EFN39515.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|307553559|gb|ADN46334.1| dimethylsulfoxide reductase, B subunit [Escherichia coli ABU 83972] gi|307626925|gb|ADN71229.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli UM146] gi|308923404|gb|EFP68915.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] gi|310337888|gb|EFQ02977.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|312288764|gb|EFR16664.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|312946189|gb|ADR27016.1| oxidoreductase, Fe-S subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315060895|gb|ADT75222.1| oxidoreductase, Fe-S subunit [Escherichia coli W] gi|315136229|dbj|BAJ43388.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli DH1] gi|315619043|gb|EFU99625.1| dimethylsulfoxide reductase, chain B [Escherichia coli 3431] gi|320188273|gb|EFW62935.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320197771|gb|EFW72379.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli EC4100B] gi|320641943|gb|EFX11307.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H7 str. G5101] gi|320647259|gb|EFX16067.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H- str. 493-89] gi|320652552|gb|EFX20821.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H- str. H 2687] gi|320653073|gb|EFX21267.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658761|gb|EFX26435.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O55:H7 str. USDA 5905] gi|320668612|gb|EFX35417.1| putative anaerobic dimethyl sulfoxide reductase chain ynfG [Escherichia coli O157:H7 str. LSU-61] gi|323152910|gb|EFZ39180.1| dimethylsulfoxide reductase, chain B [Escherichia coli EPECa14] gi|323163340|gb|EFZ49167.1| dimethylsulfoxide reductase, chain B [Escherichia coli E128010] gi|323169880|gb|EFZ55536.1| dimethylsulfoxide reductase, chain B [Escherichia coli LT-68] gi|323180903|gb|EFZ66441.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1180] gi|323185873|gb|EFZ71230.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1357] gi|323187212|gb|EFZ72526.1| dimethylsulfoxide reductase, chain B [Escherichia coli RN587/1] gi|323378536|gb|ADX50804.1| dimethylsulfoxide reductase, chain B [Escherichia coli KO11] gi|323937383|gb|EGB33661.1| dimethylsulfoxide reductase [Escherichia coli E1520] gi|323940336|gb|EGB36528.1| dimethylsulfoxide reductase [Escherichia coli E482] gi|323947977|gb|EGB43971.1| dimethylsulfoxide reductase [Escherichia coli H120] gi|323952573|gb|EGB48445.1| dimethylsulfoxide reductase [Escherichia coli H252] gi|323956753|gb|EGB52488.1| dimethylsulfoxide reductase [Escherichia coli H263] gi|323962219|gb|EGB57811.1| dimethylsulfoxide reductase [Escherichia coli H489] gi|323973778|gb|EGB68952.1| dimethylsulfoxide reductase [Escherichia coli TA007] gi|324119343|gb|EGC13230.1| dimethylsulfoxide reductase [Escherichia coli E1167] gi|326341954|gb|EGD65735.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] gi|326343504|gb|EGD67266.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|330911395|gb|EGH39905.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli AA86] gi|331038970|gb|EGI11190.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331043858|gb|EGI15994.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] gi|331049075|gb|EGI21147.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|331058857|gb|EGI30834.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331063455|gb|EGI35366.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331073907|gb|EGI45227.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331079310|gb|EGI50507.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332091391|gb|EGI96477.1| dimethylsulfoxide reductase, chain B [Shigella boydii 5216-82] gi|332101622|gb|EGJ04968.1| oxidoreductase [Shigella sp. D9] gi|332343306|gb|AEE56640.1| dimethylsulfoxide reductase, chain B DmsB [Escherichia coli UMNK88] Length = 205 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|319936847|ref|ZP_08011259.1| 4Fe-4S ferredoxin [Coprobacillus sp. 29_1] gi|319808115|gb|EFW04687.1| 4Fe-4S ferredoxin [Coprobacillus sp. 29_1] Length = 366 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VV + CI C C+++C D ++ +I+ D+C+ CG C CP DAIK + Sbjct: 190 VVQDLCIGCGQ--CIKICAHDAPTITDHKASINHDKCVGCGRCIGVCPKDAIKASMDEA 246 >gi|327400970|ref|YP_004341809.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316478|gb|AEA47094.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 127 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C C+ +CPV+ GE + I+ +CI CG C CPV A+K Sbjct: 77 EKCIHCG--ACISICPVEAIELNGEKKVVINASKCIHCGNCVNVCPVKALK 125 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIK 56 E + ++CI CG C CPV+AI+ Sbjct: 69 ERAVEKDEEKCIHCGACISICPVEAIE 95 >gi|254884686|ref|ZP_05257396.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837479|gb|EET17788.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 488 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 117 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 173 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 154 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 213 Query: 52 VDAIKP 57 AI Sbjct: 214 FGAIFE 219 >gi|238018929|ref|ZP_04599355.1| hypothetical protein VEIDISOL_00789 [Veillonella dispar ATCC 17748] gi|313892975|ref|ZP_07826552.1| ferredoxin [Veillonella sp. oral taxon 158 str. F0412] gi|237864413|gb|EEP65703.1| hypothetical protein VEIDISOL_00789 [Veillonella dispar ATCC 17748] gi|313442328|gb|EFR60743.1| ferredoxin [Veillonella sp. oral taxon 158 str. F0412] Length = 54 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV EGE I+ D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCG--SCASVCPVSAISEGETKYEIN-DTCIDCGSCESVCPVSVISAE 54 >gi|237730860|ref|ZP_04561341.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] gi|226906399|gb|EEH92317.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] Length = 205 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|220932266|ref|YP_002509174.1| electron transport complex, RnfABCDGE type, B subunit [Halothermothrix orenii H 168] gi|219993576|gb|ACL70179.1| electron transport complex, RnfABCDGE type, B subunit [Halothermothrix orenii H 168] Length = 331 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C C VCPVD +N I D+CI+CG+C +CP AI+ + Sbjct: 217 CIGCG--ICARVCPVDAITIEDNLAVIDYDKCINCGLCAEKCPTGAIEFE 264 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C C E CP +EG IH D+C+ C C CPVDAI+ + E Sbjct: 244 DKCINCGL--CAEKCPTGAIEFEGRRIEEIHITDKCVGCTRCARACPVDAIEGSLKEKHE 301 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV-DAIK 56 +T+ C+ C T C CPVD + I+P+ C+ CG+C C V AI+ Sbjct: 273 ITDKCVGC--TRCARACPVDAIEGSLKEKHEINPETCVKCGICYDTCKVKGAIE 324 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 DCV VCP D EN L ++ D+C CG C CP I Sbjct: 146 GDCVAVCPFDAIEMNENGLPEVNYDKCTGCGKCVEACPRGII 187 >gi|266619158|ref|ZP_06112093.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium hathewayi DSM 13479] gi|288869304|gb|EFD01603.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium hathewayi DSM 13479] Length = 425 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ C C +VCPV EGEN ++ + C+ CGVC C V AI+ P Sbjct: 293 ERCVGCG--KCAKVCPVLAVSMEEGENGKKKAVVNKEICLGCGVCARNCAVKAIELQRRP 350 Query: 62 GL 63 Sbjct: 351 EQ 352 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 P+ I + C+ CG C CPV A+ + + +N E Sbjct: 277 PMQPVATTNYIPEISLERCVGCGKCAKVCPVLAVSMEEGENGKKKAVVNKE 327 >gi|300869677|ref|YP_003784548.1| Fe-hydrogenase large subunit family protein [Brachyspira pilosicoli 95/1000] gi|300687376|gb|ADK30047.1| Fe-hydrogenase large subunit family protein [Brachyspira pilosicoli 95/1000] Length = 490 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VT+ C C C+ CP + E I +CI+CG+C CP AI Sbjct: 112 FMVTDACQACLARPCMMNCPKNAITILDEKRAYIDSSKCINCGLCLKNCPYHAI 165 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 15/68 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVC 46 Y+ + CI C C E CPV + E I +CI CG C Sbjct: 143 AYIDSSKCINCGLCLKNCPYHAIIYIPVPCEESCPVGAINKNEQGKEVIDYHKCIFCGNC 202 Query: 47 EPECPVDA 54 ECP A Sbjct: 203 MRECPFSA 210 >gi|237709652|ref|ZP_04540133.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456288|gb|EEO62009.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 487 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 117 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 173 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 154 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 213 Query: 52 VDAIKP 57 AI Sbjct: 214 FGAIFE 219 >gi|237725194|ref|ZP_04555675.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754284|ref|ZP_06089473.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229436460|gb|EEO46537.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|263234993|gb|EEZ20548.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 487 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 117 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 173 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 154 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 213 Query: 52 VDAIKP 57 AI Sbjct: 214 FGAIFE 219 >gi|225575176|ref|ZP_03783786.1| hypothetical protein RUMHYD_03265 [Blautia hydrogenotrophica DSM 10507] gi|225037609|gb|EEG47855.1| hypothetical protein RUMHYD_03265 [Blautia hydrogenotrophica DSM 10507] Length = 317 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C CK ++ CPV+ + I PD C +CG C C DA++ + +PG +++ Sbjct: 172 DECNGCKKCSVIDACPVNAVKMVDGVAEIDPDICTNCGRCIGHCHFDALE-EGKPGFKIY 230 Query: 67 L 67 + Sbjct: 231 I 231 >gi|227355510|ref|ZP_03839905.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|227164306|gb|EEI49195.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 205 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+VCP ++ E+ F+ ++ + CI C C CP A + D Sbjct: 60 AYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQFDE 118 >gi|91201718|emb|CAJ74778.1| strongly similar to ferredoxin [Candidatus Kuenenia stuttgartiensis] Length = 56 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + E CI C C CPV+ E + I C DCG C CPVDAI Sbjct: 1 MAHSINEECINC--AACESECPVEAISEAGDVRVIDESTCTDCGNCVSVCPVDAI 53 >gi|302389112|ref|YP_003824933.1| NADH dehydrogenase (quinone) [Thermosediminibacter oceani DSM 16646] gi|302199740|gb|ADL07310.1| NADH dehydrogenase (quinone) [Thermosediminibacter oceani DSM 16646] Length = 625 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C + C VCPV E + I+PD+CI CG C CP A+K Sbjct: 576 CKGC--SKCSRVCPVGAISGEIKKPFTINPDKCIKCGACVEACPFKAVKE 623 Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 12/78 (15%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNI 80 CP + AI C C C CPV AI + + T P+ Sbjct: 558 CPAG-VCQALKRYAIDATVCKGCSKCSRVCPVGAISGEIKKP-----------FTINPDK 605 Query: 81 TTKKESLPSAAKMDGVKQ 98 K + A VK+ Sbjct: 606 CIKCGACVEACPFKAVKE 623 >gi|295111792|emb|CBL28542.1| Uncharacterized Fe-S center protein [Synergistetes bacterium SGP1] Length = 370 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V E CI C CV +C D + I D C+ CG C CPVDA+ PD + Sbjct: 191 PHVEQEKCICCG--RCVRICAHDAPHVTPGRGATIDHDRCVGCGRCIGACPVDAVAPDYD 248 Query: 61 PGLE 64 + Sbjct: 249 EAFD 252 >gi|167748586|ref|ZP_02420713.1| hypothetical protein ANACAC_03359 [Anaerostipes caccae DSM 14662] gi|167651900|gb|EDR96029.1| hypothetical protein ANACAC_03359 [Anaerostipes caccae DSM 14662] Length = 216 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++TE CI C C +VCP C EG+ I + C+ CG+C+ +CP AI+ Sbjct: 162 FLITEACIGCG--TCRDVCPQQCISEGKP-YKIQQEHCLHCGLCKEQCPAGAIQ 212 >gi|253582598|ref|ZP_04859819.1| electron transport complex protein [Fusobacterium varium ATCC 27725] gi|251835468|gb|EES64008.1| electron transport complex protein [Fusobacterium varium ATCC 27725] Length = 333 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + CI C C + CPVD N I P++CI CG+C +CP +AIK + + Sbjct: 215 STACIGCGL--CKKACPVDAITVENNLAKIDPEKCIQCGLCAAKCPTNAIKSEIKE 268 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C+ C T C +VCPV E + I ++CI CG+C +C + AIK Sbjct: 274 IIEEKCVGC--TLCAKVCPVGAVEGELKAKHKIDQEKCIGCGLCFDKCKLKAIK 325 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 H DC VCPV+ + + ++ D+CI CG+C+ CP I Sbjct: 145 GHGDCERVCPVNAIKVNDKGIAEVNEDKCISCGLCQKACPKKVI 188 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E CI C C CP + + I ++C+ C +C CPV A++ + + Sbjct: 245 EKCIQCGL--CAAKCPTNAIKSEIKEVKKAEIIEEKCVGCTLCAKVCPVGAVEGELKAKH 302 Query: 64 E 64 + Sbjct: 303 K 303 >gi|150402670|ref|YP_001329964.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033700|gb|ABR65813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 138 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C+ CP D + ++ + I P++CI C +C CPV AI+ D Sbjct: 35 CMHCEDAPCLNACPEDAIKKIDDKVIIEPEKCIGCALCAEVCPVGAIQID 84 >gi|257470438|ref|ZP_05634529.1| electron transport complex, RnfABCDGE type, B subunit [Fusobacterium ulcerans ATCC 49185] gi|317064646|ref|ZP_07929131.1| electron transport complex protein [Fusobacterium ulcerans ATCC 49185] gi|313690322|gb|EFS27157.1| electron transport complex protein [Fusobacterium ulcerans ATCC 49185] Length = 333 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + CI C C + CPVD N I P++CI CG+C +CP +AIK + + Sbjct: 215 STACIGCGL--CKKACPVDAITVENNLAKIDPEKCIQCGLCAAKCPTNAIKSEIKE 268 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C+ C T C +VCPV E + I ++CI CG+C +C + AIK Sbjct: 274 IIEEKCVGC--TLCAKVCPVGAVEGELKAKHKIDQEKCIGCGLCFDKCKLKAIK 325 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 H DC VCPV+ + + + D+CI CG+C+ CP I Sbjct: 145 GHGDCERVCPVNAIKVNDKGIAEVDEDKCISCGLCQKACPKKVI 188 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E CI C C CP + + I ++C+ C +C CPV A++ + + Sbjct: 245 EKCIQCGL--CAAKCPTNAIKSEIKEIKKAEIIEEKCVGCTLCAKVCPVGAVEGELKAKH 302 Query: 64 E 64 + Sbjct: 303 K 303 >gi|258515175|ref|YP_003191397.1| Electron transfer flavoprotein alpha/beta- subunit [Desulfotomaculum acetoxidans DSM 771] gi|257778880|gb|ACV62774.1| Electron transfer flavoprotein alpha/beta- subunit [Desulfotomaculum acetoxidans DSM 771] Length = 441 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 MT V+ CI C C+ CP Y +N L I CI+CG C CPV AI Sbjct: 1 MTVNVSNTCIGC--QACISACPHGALYIDDNGLCKVI-AKNCIECGGCIGVCPVGAI 54 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C C CP A+ D Sbjct: 7 NTCIGCQACISACPHGALYIDDN 29 >gi|229585998|ref|YP_002844500.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|228021048|gb|ACP56455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] Length = 398 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 51 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|281356040|ref|ZP_06242533.1| Ferredoxin hydrogenase [Victivallis vadensis ATCC BAA-548] gi|281317409|gb|EFB01430.1| Ferredoxin hydrogenase [Victivallis vadensis ATCC BAA-548] Length = 463 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ +C+ C CV VCP I +CI+CG C CP AI Sbjct: 111 VSNSCVGCFARPCVGVCPKQAIQVINQRSTIDRTKCINCGKCMTVCPYHAI 161 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 15/62 (24%) Query: 9 CILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 CI C C + CPV +GE+ I CI CG C CP Sbjct: 146 CINCGKCMTVCPYHAIIRNPLPCEDACPVGAIGKGEDGRVRIDFKNCIYCGKCFRACPFS 205 Query: 54 AI 55 AI Sbjct: 206 AI 207 >gi|150399563|ref|YP_001323330.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012266|gb|ABR54718.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 166 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C EVCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCSEVCPVSAIESKDGVIYLDKETCIGCGLCAMACPFGAIY 91 >gi|238791355|ref|ZP_04634994.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia intermedia ATCC 29909] gi|238729488|gb|EEQ21003.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia intermedia ATCC 29909] Length = 205 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 60 AYYLSIACNHCSDPACTKVCPSGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDEA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|317470852|ref|ZP_07930233.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316901679|gb|EFV23612.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 216 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +++TE CI C C +VCP C EG+ I + C+ CG+C+ +CP AI+ Sbjct: 162 FLITEACIGCG--TCRDVCPQQCISEGKP-YKIQQEHCLHCGLCKEQCPAGAIQ 212 >gi|311280101|ref|YP_003942332.1| glutamate synthase, small subunit [Enterobacter cloacae SCF1] gi|308749296|gb|ADO49048.1| glutamate synthase, small subunit [Enterobacter cloacae SCF1] Length = 646 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C CV CP +N + ++ CI C C CP AI+ Sbjct: 56 CRHCNDAPCVASCPTHALRFDDNSVQLNQTLCIGCKNCAIACPFGAIE 103 >gi|292494297|ref|YP_003533440.1| molybdopterin oxidoreductase [Haloferax volcanii DS2] gi|291369264|gb|ADE01494.1| molybdopterin oxidoreductase [Haloferax volcanii DS2] Length = 273 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 M+Y T C C + CV+VCPV+ Y E+ + I D+CI C C CP +A + Sbjct: 64 MSYQPT-ACQHCDNAPCVKVCPVNATYTREDGIVEIDYDKCIGCRYCMAACPYNARVFNW 122 Query: 60 EPGL 63 + Sbjct: 123 DEPQ 126 >gi|302875429|ref|YP_003844062.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] gi|302578286|gb|ADL52298.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 613 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 Y +T++C C T C+ VC VD I D+CI CG C C DAI Sbjct: 559 YYITDDCKGC--TKCMNVCAVDAINGQVRSRHIIDADKCIRCGACRKICSFDAI 610 >gi|227826744|ref|YP_002828523.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.14.25] gi|229583908|ref|YP_002842409.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.27] gi|238618839|ref|YP_002913664.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.4] gi|227458539|gb|ACP37225.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.14.25] gi|228018957|gb|ACP54364.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.27] gi|238379908|gb|ACR40996.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus M.16.4] Length = 363 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + N +W Sbjct: 326 DYRRPYEMWKE-NKAKYKEW 344 >gi|227829378|ref|YP_002831157.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus L.S.2.15] gi|229578177|ref|YP_002836575.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.G.57.14] gi|284996746|ref|YP_003418513.1| hypothetical protein LD85_0352 [Sulfolobus islandicus L.D.8.5] gi|227455825|gb|ACP34512.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus L.S.2.15] gi|228008891|gb|ACP44653.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.G.57.14] gi|284444641|gb|ADB86143.1| hypothetical protein LD85_0352 [Sulfolobus islandicus L.D.8.5] Length = 363 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + N +W Sbjct: 326 DYRRPYEMWKE-NKAKYKEW 344 >gi|187924671|ref|YP_001896313.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phytofirmans PsJN] gi|187715865|gb|ACD17089.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia phytofirmans PsJN] Length = 413 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 19/97 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C E CPVD +N + + C C C P CP AI K D Sbjct: 18 EICIRCN--TCEETCPVDAITHDDNNYVVKAEICNGCMACVPPCPTGAIDNWRTVLKADA 75 Query: 60 EPGLELWLKINSEYATQWPNITTKKE-SLPSAAKMDG 95 P E + W + + ++P+A ++ G Sbjct: 76 YPIEEQF---------TWDVLPEQNTMAVPAADELPG 103 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 15 IDPEICIRCNTCEETCPVDAITHDDN 40 >gi|317405896|gb|EFV86178.1| ferredoxin-NADP oxidoreductase [Achromobacter xylosoxidans C54] Length = 415 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C E CP+D N + PD C C C P CP +I L Sbjct: 18 EICIRCN--TCEETCPIDAITHDSNNYVVDPDICNSCMACVPPCPTGSI-----DNWRLV 70 Query: 67 LKINSEYATQ----WPNITTKKESLPSAA 91 L+ ++ Y+ Q W + +++ LP AA Sbjct: 71 LRSDA-YSVQDQLGWDELP-REQPLPEAA 97 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D+ Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDSN 40 >gi|289423315|ref|ZP_06425123.1| conserved domain protein [Peptostreptococcus anaerobius 653-L] gi|289156246|gb|EFD04903.1| conserved domain protein [Peptostreptococcus anaerobius 653-L] Length = 55 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M YV+ ++CI C C CPV C +G + +I CIDCG C CPVDA +P+ Sbjct: 1 MAYVIKDSCIACG--ACAAECPVSCISDG-DIYSIDASACIDCGSCAGVCPVDAPQPE 55 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 12/28 (42%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 + D CI CG C ECPV I Sbjct: 1 MAYVIKDSCIACGACAAECPVSCISDGD 28 >gi|283953866|ref|ZP_06371396.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 414] gi|283794645|gb|EFC33384.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 414] Length = 213 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|227828791|ref|YP_002830571.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|238620983|ref|YP_002915809.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|227460587|gb|ACP39273.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|238382053|gb|ACR43141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] Length = 398 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 51 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|229583141|ref|YP_002841540.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.N.15.51] gi|228013857|gb|ACP49618.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus Y.N.15.51] Length = 363 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + N +W Sbjct: 326 DYRRPYEMWKE-NKAKYKEW 344 >gi|51893221|ref|YP_075912.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] gi|51856910|dbj|BAD41068.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] Length = 256 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V C+ C C VCPV Y+GE+ + I D CI C C CP A Sbjct: 101 VPRPCMQCDSPPCAGVCPVGATYKGESGIVVIDDDRCIGCRYCIAACPYGA 151 >gi|294776604|ref|ZP_06742073.1| 4Fe-4S binding domain protein [Bacteroides vulgatus PC510] gi|319642355|ref|ZP_07997010.1| hydrogenase [Bacteroides sp. 3_1_40A] gi|294449519|gb|EFG18050.1| 4Fe-4S binding domain protein [Bacteroides vulgatus PC510] gi|317386015|gb|EFV66939.1| hydrogenase [Bacteroides sp. 3_1_40A] Length = 481 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T+ C C C CP + I D CI CG+C CP AI Sbjct: 110 YEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVY 166 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I ++CI CG C CP Sbjct: 147 DTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACP 206 Query: 52 VDAIKP 57 AI Sbjct: 207 FGAIFE 212 >gi|291532617|emb|CBL05730.1| Uncharacterized Fe-S center protein [Megamonas hypermegale ART12/1] Length = 375 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V T+ C+ C C +C + I PD+C+ CG C C DAIKP Sbjct: 193 VDTDKCVGCG--ACSRICAHGAPIITDRKCYIDPDKCLGCGRCIGACHFDAIKP 244 >gi|134299396|ref|YP_001112892.1| electron transfer flavoprotein subunit beta [Desulfotomaculum reducens MI-1] gi|134052096|gb|ABO50067.1| electron transfer flavoprotein beta-subunit [Desulfotomaculum reducens MI-1] Length = 439 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 M V+ C+ C C+ CP + F + P++C+DCG C CPV+A Sbjct: 1 MAVKVSSACMGC--QACITSCPHEALFMNDAGVCQVIPEKCVDCGECVEVCPVEA 53 >gi|333006700|gb|EGK26199.1| dimethylsulfoxide reductase, chain B [Shigella flexneri VA-6] Length = 205 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCHYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|255011300|ref|ZP_05283426.1| putative hydrogenase [Bacteroides fragilis 3_1_12] gi|313149111|ref|ZP_07811304.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137878|gb|EFR55238.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 489 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y +T C C C CP D +N A I D CI CG C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + EN + I ++CI CG C CP Sbjct: 150 DACISCGKCHQSCPYHAIVFIPVPCEEACPVKAISKDENGIEHIDENKCIYCGKCLNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|242238729|ref|YP_002986910.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] gi|242130786|gb|ACS85088.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] Length = 208 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C +VCPV+ ++ + + + C+ C +C CP AI P Sbjct: 51 CRHCEDAPCAKVCPVNAIRHEDHAVMLDENACVGCKLCAIACPFGAITP 99 >gi|154148560|ref|YP_001406021.1| formate dehydrogenase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] gi|153804569|gb|ABS51576.1| formate dehydrogenase iron-sulfur subunit [Campylobacter hominis ATCC BAA-381] Length = 187 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 Y T C C C +VCPV CFY + + +H +CI CG C CP A + + Sbjct: 50 YSSTLACQHCTDAPCAQVCPVKCFYIRADGIVLHDKKKCIGCGYCLYACPFGAPQFPRDG 109 Query: 62 GLELWLKIN 70 + +++ Sbjct: 110 AFGIKGEMD 118 >gi|158520473|ref|YP_001528343.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509299|gb|ABW66266.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 361 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + C C+ C ++CP++ ++ + CI CGVC CP DA+ + Sbjct: 293 ARVDADTCTGCE--ACADICPMEAIEMKDDIAHVSDSRCIGCGVCAYHCPADALALERTG 350 Query: 62 GLELWL 67 E+++ Sbjct: 351 QREVFV 356 >gi|325970932|ref|YP_004247123.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] gi|324026170|gb|ADY12929.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] Length = 55 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C CP EG + I D CIDCG C CP AI Sbjct: 1 MAYKITDACVACG--TCQPECPTGAISEG-DIYVIDADACIDCGTCADVCPTAAI 52 >gi|294635459|ref|ZP_06713947.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] gi|291091192|gb|EFE23753.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] Length = 218 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + C C C++VCP + EN + ++P +CI CG C CP A D Sbjct: 88 QACQHCDQAPCIDVCPTGASWRDENGIVRVNPADCIGCGYCVSACPYQARYLD 140 >gi|323476480|gb|ADX81718.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus HVE10/4] Length = 363 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + N +W Sbjct: 326 DYRRPYEMWKE-NKAKYKEW 344 >gi|206889463|ref|YP_002248730.1| nitrate-inducible formate dehydrogenase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741401|gb|ACI20458.1| nitrate-inducible formate dehydrogenase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 243 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 V++ C+ C CV++CPV + + + ++CI C C+ CP D + D Sbjct: 69 FVSQRCMHCGEPACVQICPVGALMKDKETGIVYYDKNKCIACHACKSACPFDVPRYDD 126 >gi|121533839|ref|ZP_01665666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307830|gb|EAX48745.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 55 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M Y +TE C+ C C CPV EG I +EC++CG C CPV AIK Sbjct: 1 MAYKITEECVACG--SCAATCPVGAIKEGNPTYVIT-EECVECGACAAVCPVGAIK 53 >gi|153950968|ref|YP_001398811.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. doylei 269.97] gi|152938414|gb|ABS43155.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 213 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|9651774|gb|AAF91266.1|AF230199_8 pyruvate oxidoreductase cysteine-rich subunit 1 [Methanococcus maripaludis] Length = 167 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C + C++VCPV + + + + CI CG+C CP AI Sbjct: 44 CQHCTSSPCMDVCPVSAIESKDGVIYLDKESCIGCGLCAMACPFGAIY 91 >gi|323473828|gb|ADX84434.1| pyruvate ferredoxin, flavodoxin oxidoreductase, delta subunit [Sulfolobus islandicus REY15A] Length = 363 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF E + I D C+ CG+C CPV +++ Sbjct: 268 DTCIKCKL--CWIYCPDECFDETPDGYYDIAYDYCVGCGICADVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + N +W Sbjct: 326 DYRRPYEMWKE-NKAKYKEW 344 >gi|332758139|gb|EGJ88464.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2747-71] Length = 205 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLAISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|290967991|ref|ZP_06559540.1| ferredoxin [Megasphaera genomosp. type_1 str. 28L] gi|290781897|gb|EFD94476.1| ferredoxin [Megasphaera genomosp. type_1 str. 28L] Length = 54 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+++ C++C C CP EGE+ I D CIDCG CE CP AI + Sbjct: 2 HVISDECVMCG--SCAATCPTGAIEEGESKYVIT-DSCIDCGACESVCPTGAISAE 54 >gi|262383251|ref|ZP_06076387.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301309306|ref|ZP_07215248.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|262294149|gb|EEY82081.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300832395|gb|EFK63023.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 262 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 5 VTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VT+N C C++ CV+VCP + + P+ CI C C ECP A DT Sbjct: 188 VTDNDLCTQCEY--CVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTFDTP 243 >gi|57238533|ref|YP_179664.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni RM1221] gi|57167337|gb|AAW36116.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni RM1221] gi|315058963|gb|ADT73292.1| Formate dehydrogenase-O, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni S3] Length = 213 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|220932902|ref|YP_002509810.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] gi|219994212|gb|ACL70815.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothermothrix orenii H 168] Length = 370 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 4/79 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C CV+ CP + + I + CI CG C CP DAIK E + Sbjct: 194 EKCEKC--RKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAIKIQWESTSQGV 251 Query: 67 LKINSEYATQWPNITTKKE 85 + E++ + I KK+ Sbjct: 252 QERIVEFS--YGIIKEKKD 268 >gi|325281874|ref|YP_004254416.1| Ferredoxin hydrogenase [Odoribacter splanchnicus DSM 20712] gi|324313683|gb|ADY34236.1| Ferredoxin hydrogenase [Odoribacter splanchnicus DSM 20712] Length = 471 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y VT C C+ CV CP +I ++C+ CG+C+ CP AI Sbjct: 112 YAVTNLCRGCEGRPCVMNCPKAAISFIGGKASISSEDCVSCGLCQKVCPYHAIVY 166 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 15/65 (23%) Query: 6 TENCILCKHT--------------DCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPEC 50 +E+C+ C C +VCPV + E I ++CI CG C C Sbjct: 146 SEDCVSCGLCQKVCPYHAIVYTPVPCEDVCPVKAISKDAEGVEHIDKEKCIYCGKCMQAC 205 Query: 51 PVDAI 55 P AI Sbjct: 206 PYGAI 210 >gi|307729116|ref|YP_003906340.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1003] gi|307583651|gb|ADN57049.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1003] Length = 412 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C E CP+D EN + D C C C P CP AI K D Sbjct: 18 EICIRCN--TCEETCPIDAITHDENNYVVKADVCNGCMACVPPCPTGAIDNWRTVLKADA 75 Query: 60 EPGLELWL 67 P E + Sbjct: 76 YPVEEQFT 83 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDEN 40 >gi|257790423|ref|YP_003181029.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474320|gb|ACV54640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 207 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 ++ ++ +C+ C+ C++VCP + + + ++PD CI C C CP + K ++ Sbjct: 84 SFFISTSCMHCEDPSCMKVCPAGAISKDAHGIVKVNPDVCIGCKYCFQACPYEVPKYNS 142 >gi|238761728|ref|ZP_04622703.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia kristensenii ATCC 33638] gi|238700242|gb|EEP92984.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia kristensenii ATCC 33638] Length = 204 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ ++ D CI C C CP A + D Sbjct: 59 AYYLSIACNHCSDPACTKVCPSGAMHKRDDGFVVVNEDICIGCRYCHMACPYGAPQYDEA 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|227831524|ref|YP_002833304.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|229580472|ref|YP_002838872.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|284999076|ref|YP_003420844.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457972|gb|ACP36659.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|228011188|gb|ACP46950.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|284446972|gb|ADB88474.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|323475826|gb|ADX86432.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] gi|323478601|gb|ADX83839.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 398 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 51 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|224371568|ref|YP_002605732.1| iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] gi|223694285|gb|ACN17568.1| iron-sulfur cluster binding protein [Desulfobacterium autotrophicum HRM2] Length = 375 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C C + CP+D + D CI CG+C CP AI + +P Sbjct: 276 CTGCG--ICKKRCPMDAISIKNKRAVLDLDRCIGCGLCVSTCPEKAIHLERKPEA 328 Score = 37.1 bits (85), Expect = 0.86, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 36 HPDECIDCGVCEPECPVDAI 55 P C CG+C+ CP+DAI Sbjct: 272 DPGLCTGCGICKKRCPMDAI 291 >gi|139437063|ref|ZP_01771223.1| Hypothetical protein COLAER_00198 [Collinsella aerofaciens ATCC 25986] gi|133776710|gb|EBA40530.1| Hypothetical protein COLAER_00198 [Collinsella aerofaciens ATCC 25986] Length = 205 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C EVCPV+ + + + ECI C +C CP AI PD Sbjct: 50 ACHHCEGAPCAEVCPVNAIEHDGDRIHVKEQECIGCRLCAIACPFGAIHPD 100 >gi|188495052|ref|ZP_03002322.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|188490251|gb|EDU65354.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] Length = 205 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYSLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|315231407|ref|YP_004071843.1| indolepyruvate oxidoreductase IorA-like subunit [Thermococcus barophilus MP] gi|315184435|gb|ADT84620.1| indolepyruvate oxidoreductase IorA-like subunit [Thermococcus barophilus MP] Length = 616 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ + C+ CK + CP + N + I P C CG+C CP +AIK +E G Sbjct: 555 VIEDKCVGCKACILLTGCPALVYDPETNKVRIDPLICTGCGICNQLCPFEAIKFPSEIGK 614 Query: 64 EL 65 + Sbjct: 615 KE 616 >gi|296449690|ref|ZP_06891460.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296877993|ref|ZP_06902012.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] gi|296261414|gb|EFH08239.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296431061|gb|EFH16889.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] Length = 509 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C E C I+ + C CG+C+ C DAI P Sbjct: 118 FTVTDICRGCLAHRCKEACKFGAITHVGGMAYINHELCKACGMCKKACQYDAISEVVRP 176 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 18/104 (17%) Query: 1 MTYVVTENCILCK--------------HTDCVEVCPVDC-FYEGENF-LAIHPDECIDCG 44 M Y+ E C C C VCP + ++ EN IH ++C++CG Sbjct: 147 MAYINHELCKACGMCKKACQYDAISEVVRPCKSVCPTNALGFDRENMKAMIHEEKCLNCG 206 Query: 45 VCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P ++ YA P IT + E+ Sbjct: 207 ACMSACPFGAISDKSLIAPVARKLVQKEKMYAVVAPAITGQVEA 250 >gi|218245586|ref|YP_002370957.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 8801] gi|257058632|ref|YP_003136520.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8802] gi|218166064|gb|ACK64801.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8801] gi|256588798|gb|ACU99684.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 8802] Length = 75 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C +EG ++ I + CIDCG+C CPV Sbjct: 1 MPHTIVTETCEGV--ADCVDACPVACIHEGPGKNSKGTDWYWIDFNTCIDCGICLNVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAIIPEERPDLQK 72 >gi|229580878|ref|YP_002839277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|228011594|gb|ACP47355.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] Length = 398 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C++VCP + + E + I D+CI CG C CP +A+K + E Sbjct: 51 ACNHCDNPTCMQVCPANAIEKNEMGIVRIRDDKCIGCGFCTWACPYEALKFNNE 104 >gi|150008416|ref|YP_001303159.1| putative ferredoxin iron-sulfur protein [Parabacteroides distasonis ATCC 8503] gi|255014151|ref|ZP_05286277.1| putative ferredoxin, putative iron-sulfur protein [Bacteroides sp. 2_1_7] gi|149936840|gb|ABR43537.1| putative ferredoxin, putative iron-sulfur protein [Parabacteroides distasonis ATCC 8503] Length = 262 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 5 VTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VT+N C C++ CV+VCP + + P+ CI C C ECP A DT Sbjct: 188 VTDNDLCTQCEY--CVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTFDTP 243 >gi|86149326|ref|ZP_01067557.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152455|ref|ZP_01070660.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596633|ref|ZP_01099870.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613584|ref|YP_001001157.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|148925675|ref|ZP_01809363.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157415732|ref|YP_001482988.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81116] gi|167006050|ref|ZP_02271808.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|205356647|ref|ZP_03223409.1| putative formate dehydrogenase iron sulfur subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|218563110|ref|YP_002344889.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956886|ref|ZP_06374359.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 1336] gi|85840108|gb|EAQ57366.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843340|gb|EAQ60550.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249822|gb|EAQ72781.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88191474|gb|EAQ95446.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112360816|emb|CAL35616.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845685|gb|EDK22776.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157386696|gb|ABV53011.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 81116] gi|205345504|gb|EDZ32145.1| putative formate dehydrogenase iron sulfur subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|283791612|gb|EFC30408.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 1336] gi|284926716|gb|ADC29068.1| putative formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni IA3902] gi|307748373|gb|ADN91643.1| Formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni M1] gi|315927458|gb|EFV06796.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930114|gb|EFV09241.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 305] Length = 213 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|73670092|ref|YP_306107.1| sulfite reductase subunit beta [Methanosarcina barkeri str. Fusaro] gi|72397254|gb|AAZ71527.1| sulfite reductase, beta subunit [Methanosarcina barkeri str. Fusaro] Length = 285 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M +V ENC+ CK C + C V E+ +I ++CI CG C C DA+K + Sbjct: 160 MPKIVEENCVGCKL--CEKACKVGAIKVLEDKASIDTEKCILCGACIAACRKDALKAE 215 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 8/47 (17%) Query: 18 VEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPVDAIK 56 V CP C EN I + C+ C +CE C V AIK Sbjct: 138 VTGCPAACVRPQENDFGIMGTVMPKIVEENCVGCKLCEKACKVGAIK 184 >gi|260888766|ref|ZP_05900029.1| putative 4Fe-4S binding domain protein [Selenomonas sputigena ATCC 35185] gi|330839840|ref|YP_004414420.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Selenomonas sputigena ATCC 35185] gi|260861519|gb|EEX76019.1| putative 4Fe-4S binding domain protein [Selenomonas sputigena ATCC 35185] gi|329747604|gb|AEC00961.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Selenomonas sputigena ATCC 35185] Length = 209 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + +TE+CI C C VCP C EGE I C+ CG+C CPV+AI+ Sbjct: 152 FRITEDCIGCG--TCAAVCPQQCIAEGEP-YKIAAAHCLHCGLCFESCPVEAIERLDSEA 208 Query: 63 L 63 Sbjct: 209 H 209 >gi|254509887|ref|ZP_05121954.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533598|gb|EEE36586.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 631 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 22/46 (47%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +C+++CP + +AI P C CG C CP AI + P Sbjct: 261 NCLDICPTGAITPAGDHVAIDPMICAGCGECSALCPSTAITYEDPP 306 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIK 56 V +C LC CV +CP + + ++ D C+ CG+C CP AI+ Sbjct: 478 VDAGSCTLCL--SCVSLCPSGALIDNPDKPQLNFQQDACLQCGICRTICPEQAIE 530 >gi|120597257|ref|YP_961831.1| glycyl-radical activating family protein [Shewanella sp. W3-18-1] gi|146291318|ref|YP_001181742.1| glycyl-radical activating family protein [Shewanella putrefaciens CN-32] gi|120557350|gb|ABM23277.1| glycyl-radical enzyme activating protein family [Shewanella sp. W3-18-1] gi|145563008|gb|ABP73943.1| glycyl-radical enzyme activating protein family [Shewanella putrefaciens CN-32] Length = 306 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NCI C CV CPV L I + CI CG C CP A Sbjct: 60 NCIHCG--RCVSACPVGAIDASRQGL-IDRNACIHCGACAEVCPAGA 103 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 5/42 (11%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 CI CG C CPV AI + + + N+ Sbjct: 52 PEIFYYD-RNCIHCGRCVSACPVGAI----DASRQGLIDRNA 88 >gi|257066615|ref|YP_003152871.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798495|gb|ACV29150.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaerococcus prevotii DSM 20548] Length = 57 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI + Sbjct: 1 MAYRIDENTCISCG--SCEGECPVGAISQGDAAYEIDADACIDCGSCAAVCPVEAIDQE 57 >gi|330448648|ref|ZP_08312296.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492839|dbj|GAA06793.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 186 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C VCPV + + + ++ C+ C +C CP AI D Sbjct: 33 CRHCEDAPCAAVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFD 82 >gi|256841600|ref|ZP_05547107.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737443|gb|EEU50770.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 262 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 5 VTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VT+N C C++ CV+VCP + + P+ CI C C ECP A DT Sbjct: 188 VTDNDLCTQCEY--CVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTFDTP 243 >gi|197285065|ref|YP_002150937.1| anaerobic dimethyl sulfoxide reductase subunit B [Proteus mirabilis HI4320] gi|194682552|emb|CAR42565.1| putative anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis HI4320] Length = 209 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y +T +C C CV+ CP + G+ + + +C+ CG C CP A + +T Sbjct: 71 AYTLTISCNHCNDPICVKNCPTTAMHKRPGDGIVRVDTSKCVGCGYCSWSCPYGAPQMNT 130 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 E G + + N +A K +K KY Sbjct: 131 ETGQMSKCDFCVDLLAEGKNPICVDTCPLNAIKFGKIKDLRAKY 174 >gi|119992|sp|P00197|FER_CLOSM RecName: Full=Ferredoxin gi|65699|pir||FECLCE ferredoxin 2[4Fe-4S] - Clostridium sp Length = 55 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T+ CI C C CPV+ E + I D+CIDCG C CPVDAI Sbjct: 1 AYKITDGCINCG--ACEPECPVEAISESDAVRVIDADKCIDCGACANTCPVDAI 52 >gi|60683111|ref|YP_213255.1| putative iron hydrogenase [Bacteroides fragilis NCTC 9343] gi|60494545|emb|CAH09344.1| putative iron hydrogenase [Bacteroides fragilis NCTC 9343] Length = 489 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 114 YEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + EN + I +CI CG C CP Sbjct: 150 DACISCGKCHQSCPYHAIVFIPVPCEEACPVKAISKDENGIEHIDESKCIYCGKCLNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|86151949|ref|ZP_01070162.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124937|ref|YP_004066941.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841057|gb|EAQ58306.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018659|gb|ADT66752.1| formate dehydrogenase, iron-sulfur subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 213 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 65 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 118 >gi|315187127|gb|EFU20884.1| hydrogenase large subunit domain protein [Spirochaeta thermophila DSM 6578] Length = 527 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VTE C C C CP +I + CI+CG+CE CP AI Sbjct: 158 FMVTEVCQGCVARPCKTGCPKGAISIVRGRASIDYERCINCGLCERVCPFHAI 210 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 15/69 (21%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C EVCPV +GE+ +A I CI CG C CP Sbjct: 193 ERCINCGLCERVCPFHAIVRIPVPCEEVCPVGAIEKGEDGVARIDRGACILCGKCLKACP 252 Query: 52 VDAIKPDTE 60 A + ++ Sbjct: 253 FGAPQEQSD 261 >gi|218782352|ref|YP_002433670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763736|gb|ACL06202.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 287 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V+ +CI C CVEVCP+ GE I CI CG+C CP DA++ + L+ Sbjct: 217 VSGDCIACG--KCVEVCPMHAIVLGEEKAEIQ-GRCIGCGLCASNCPTDAMELYQKAPLK 273 Query: 65 LWLK 68 +K Sbjct: 274 DDIK 277 >gi|126698470|ref|YP_001087367.1| iron-dependent hydrogenase [Clostridium difficile 630] gi|260682591|ref|YP_003213876.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260686191|ref|YP_003217324.1| iron-dependent hydrogenase [Clostridium difficile R20291] gi|260208754|emb|CBA61609.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260212207|emb|CBE02898.1| iron-dependent hydrogenase [Clostridium difficile R20291] Length = 509 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C E C I+ + C CG+C+ C DAI P Sbjct: 118 FTVTDICRGCLAHRCKEACKFGAITHVGGMAYINHELCKACGMCKKACQYDAISEVVRP 176 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 18/104 (17%) Query: 1 MTYVVTENCILCK--------------HTDCVEVCPVDC-FYEGENF-LAIHPDECIDCG 44 M Y+ E C C C VCP + ++ EN IH D+C++CG Sbjct: 147 MAYINHELCKACGMCKKACQYDAISEVVRPCKSVCPTNALGFDRENMKAMIHEDKCLNCG 206 Query: 45 VCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P ++ YA P IT + E+ Sbjct: 207 ACMSACPFGAISDKSLIAPVARKLVQKEKMYAVVAPAITGQVEA 250 >gi|256830133|ref|YP_003158861.1| glycyl-radical enzyme activating family protein [Desulfomicrobium baculatum DSM 4028] gi|256579309|gb|ACU90445.1| glycyl-radical enzyme activating protein family [Desulfomicrobium baculatum DSM 4028] Length = 306 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V + C+ C +CVE CP G + + + D C CGVC CP A Sbjct: 55 TVPDKCVGCG--ECVEACPQGALSPGPDGMLRNQDACTACGVCAEVCPALA 103 Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 26/108 (24%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 CP+ C L + PD+C+ CG C CP A+ P + L N + Sbjct: 34 CPLSCLWCHNPEGIAAPPGMLTV-PDKCVGCGECVEACPQGALSPGPDGMLR-----NQD 87 Query: 73 YATQWPNITTKKESLPSAAKMDGVK----------QKYEKYFSPNPGG 110 T +L A + G K +K +F+ N GG Sbjct: 88 ACTACGVCAEVCPAL--AHEAVGRKWTVLEVMAEIEKETPFFAGNQGG 133 >gi|254559063|ref|YP_003066158.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] gi|254266341|emb|CAX22105.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens DM4] Length = 665 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP A P L ++ Sbjct: 270 TRCLDVCPTGAISPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPADALMRRL 324 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLCL--SCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELWLK 68 E W + Sbjct: 565 EAWGE 569 >gi|317486663|ref|ZP_07945480.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922046|gb|EFV43315.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 377 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 6/75 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ CI C CV +CP E I + CI C C C AI DT Sbjct: 195 VIYPKCIGCGQ--CVPLCPRSALSLEKAEKGRHAVIDKERCIGCYECVTACKQGAIGVDT 252 Query: 60 EPGLELWLKINSEYA 74 + + +EYA Sbjct: 253 PNEYSDFAERMAEYA 267 >gi|288802958|ref|ZP_06408394.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|302345157|ref|YP_003813510.1| ferredoxin [Prevotella melaninogenica ATCC 25845] gi|288334475|gb|EFC72914.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|302149382|gb|ADK95644.1| ferredoxin [Prevotella melaninogenica ATCC 25845] Length = 55 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CPV+ EG + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPVEAISEG-DIYKIDADACTECGTCASVCPSEAI 52 >gi|269925977|ref|YP_003322600.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789637|gb|ACZ41778.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 270 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVD 53 ++ C C C+E CP E + I PD C CG C P CP Sbjct: 88 SDVCKHCAVAGCLEACPTGAIIRTEFGTVYIQPDICNGCGYCVPACPFG 136 >gi|268591456|ref|ZP_06125677.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291313110|gb|EFE53563.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 212 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+ CP + EG+ + ++ D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPMCVKNCPTTAMHKREGDGIVMVNTDKCVGCGTCAWSCPYGAPQMNP 130 Query: 60 EPGL 63 E Sbjct: 131 ETKQ 134 >gi|218528461|ref|YP_002419277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] gi|218520764|gb|ACK81349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium chloromethanicum CM4] Length = 665 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP A P L ++ Sbjct: 270 TRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPADALMRRL 324 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLCL--SCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELWLK 68 E W + Sbjct: 565 EAWAE 569 >gi|118474652|ref|YP_892674.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. fetus 82-40] gi|261885445|ref|ZP_06009484.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. venerealis str. Azul-94] gi|118413878|gb|ABK82298.1| formate dehydrogenase iron-sulfur subunit [Campylobacter fetus subsp. fetus 82-40] Length = 184 Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLE 64 T C C C +VCPV CFY + + +H ++CI CG C CP A + + Sbjct: 53 TIACQHCTDAPCAQVCPVSCFYIRADGIVLHDKNKCIGCGYCLYACPFGAPQFPRDGAFG 112 Query: 65 LWLKIN 70 + +++ Sbjct: 113 IKGEMD 118 >gi|325833428|ref|ZP_08165877.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] gi|325485352|gb|EGC87821.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] Length = 341 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 V C+ C+ CV+ CP ++ + I ++CI CG+C CP A Sbjct: 179 VPNACVQCEKPACVDACPTGASVRRDDGITVIDYEKCIACGLCLAACPYGA 229 >gi|323141630|ref|ZP_08076512.1| protein HymB [Phascolarctobacterium sp. YIT 12067] gi|322413895|gb|EFY04732.1| protein HymB [Phascolarctobacterium sp. YIT 12067] Length = 596 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 Y +++ C C C CPV I ++CI CG C CP AI Sbjct: 542 YEISDVCRGCGL--CARQCPVQAISGSPKTKHVIDQNKCIKCGACMTACPFKAI 593 >gi|240137055|ref|YP_002961524.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] gi|240007021|gb|ACS38247.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacterium extorquens AM1] Length = 665 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP A P L ++ Sbjct: 270 TRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPADALMRRL 324 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 507 TEDCTLCL--SCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 564 Query: 64 ELWLK 68 E W + Sbjct: 565 EAWGE 569 >gi|170289699|ref|YP_001736515.1| indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170173779|gb|ACB06832.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 649 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V + C C+ CP F + + + I P C CG C CP DAI+P Sbjct: 584 VNKDKCTYCRVCINTFACP--AFVDTGSSVEIDPAICFGCGACVQVCPYDAIEP 635 >gi|90407583|ref|ZP_01215764.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Psychromonas sp. CNPT3] gi|90311286|gb|EAS39390.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Psychromonas sp. CNPT3] Length = 205 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C VCPV+ + I+ CI C +C CP AI Sbjct: 51 CRHCEDAPCATVCPVNAITHVNGSIHINESLCIGCTLCSIACPFGAI 97 >gi|251790292|ref|YP_003005013.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Dickeya zeae Ech1591] gi|247538913|gb|ACT07534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya zeae Ech1591] Length = 208 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C +VCPV+ +N + + + CI C +C CP AI P Sbjct: 51 CRHCEDAPCAKVCPVNTIRHQDNAVLLDENTCIGCKLCAIACPFGAITP 99 >gi|302875371|ref|YP_003844004.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] gi|307688950|ref|ZP_07631396.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] gi|302578228|gb|ADL52240.1| putative iron-sulfur protein [Clostridium cellulovorans 743B] Length = 417 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ + C+ C C + CP+ + A+ + C+ CGVC CP +I Sbjct: 287 VIKDGCVGCG--KCAKACPIGAITMKDKKAAVDEEICLGCGVCVRNCPKKSI 336 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + D C+ CG C CP+ AI + Sbjct: 287 VIKDGCVGCGKCAKACPIGAITMKDKKAA 315 >gi|193084277|gb|ACF09936.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote KM3-130-D10] Length = 483 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + + CI C C CP DA+ D G Sbjct: 71 CNHCEDSPCTTICPTTALFTREDGIVDFDDERCIGCKSCMQACPYDALYIDPNKG 125 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 23/71 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCG---------VCEPECPV 52 E CI CK C++ CP D L I P++ C C C CP Sbjct: 101 ERCIGCK--SCMQACPYDA-------LYIDPNKGTAAKCNYCAHRIEHSYEPSCVIVCPT 151 Query: 53 DAIKPDTEPGL 63 +AI Sbjct: 152 EAIISGDLDDH 162 >gi|303229419|ref|ZP_07316209.1| ferredoxin [Veillonella atypica ACS-134-V-Col7a] gi|303231397|ref|ZP_07318131.1| ferredoxin [Veillonella atypica ACS-049-V-Sch6] gi|302513993|gb|EFL56001.1| ferredoxin [Veillonella atypica ACS-049-V-Sch6] gi|302515955|gb|EFL57907.1| ferredoxin [Veillonella atypica ACS-134-V-Col7a] Length = 54 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV EGE I+ D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCG--SCASVCPVAAISEGETKYEIN-DTCIDCGSCESVCPVSVISAE 54 >gi|53715176|ref|YP_101168.1| putative hydrogenase [Bacteroides fragilis YCH46] gi|253566311|ref|ZP_04843765.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767004|ref|ZP_06094833.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218041|dbj|BAD50634.1| putative hydrogenase [Bacteroides fragilis YCH46] gi|251945415|gb|EES85853.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263253381|gb|EEZ24857.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 489 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 114 YEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + EN + I +CI CG C CP Sbjct: 150 DACISCGKCHQSCPYHAIVFIPVPCEEACPVKAISKDENGIEHIDESKCIYCGKCLNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|332289260|ref|YP_004420112.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] gi|330432156|gb|AEC17215.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] Length = 205 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C++ C +VCP ++ E+ I + + CI C C CP DA + D + Sbjct: 60 AYYLSISCNHCENPACTKVCPTGAMHKNEDGFVIVNEEVCIGCRYCHMACPYDAPQYDAK 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|301164623|emb|CBW24182.1| putative iron hydrogenase [Bacteroides fragilis 638R] Length = 489 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y VT C C C CP D +N A I D CI CG C CP AI Sbjct: 114 YEVTNLCRGCVARSCYMNCPKDAIRFRKNGQAKIDHDACISCGKCHQSCPYHAI 167 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + EN + I +CI CG C CP Sbjct: 150 DACISCGKCHQSCPYHAIVFIPVPCEEACPVKAISKDENGIEHIDESKCIYCGKCLNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|325968156|ref|YP_004244348.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] gi|323707359|gb|ADY00846.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Vulcanisaeta moutnovskia 768-28] Length = 1137 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C C++ CP H P C CG C ECP DAI + + Sbjct: 929 CTKCGL--CIKACPYGAIRGVPGKWIEHIPAACQGCGSCVAECPQDAITLEALSDDAIMA 986 Query: 68 KINSEYATQ 76 +I++ A + Sbjct: 987 QIDAALAEE 995 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 39 ECIDCGVCEPECPVDAIK 56 +C CG+C CP AI+ Sbjct: 928 KCTKCGLCIKACPYGAIR 945 >gi|251791771|ref|YP_003006492.1| putative oxidoreductase Fe-S binding subunit [Dickeya zeae Ech1591] gi|247540392|gb|ACT09013.1| glutamate synthase, small subunit [Dickeya zeae Ech1591] Length = 667 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ + C VCP ++ + + ++CI C C CP AI + + Sbjct: 56 CRHCEDSPCANVCPTQALVRKQDGIQLVAEKCIGCKTCVLACPFGAITVENQA 108 >gi|218782988|ref|YP_002434306.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764372|gb|ACL06838.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 378 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 M V TE C+ C C E C +GE+ +++ D CI CGVC CP +AI Sbjct: 308 MAVVDTEKCVSCG--TCAEKCGTQAMTQGEDGSPSLNKDLCIGCGVCAHFCPENAI 361 >gi|146303090|ref|YP_001190406.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701340|gb|ABP94482.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 404 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 1/100 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C C + C++ CP + E + I ++CI CG C+ CP +A+ + + Sbjct: 58 SCNHCDNPVCMKSCPAVAISKNEMGIVTIDSNKCIGCGYCQWACPYEALHFSKDGTMGKC 117 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 P + Y +P Sbjct: 118 HLCVDRLGKGMPYCVESCPTGALTFGWLDRPDGEVNYLAP 157 >gi|325270555|ref|ZP_08137155.1| ferredoxin [Prevotella multiformis DSM 16608] gi|324987131|gb|EGC19114.1| ferredoxin [Prevotella multiformis DSM 16608] Length = 55 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CPV EG + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPVGAISEG-DIYKIDADACTECGTCASVCPNEAI 52 >gi|255322780|ref|ZP_05363922.1| electron transport protein HydN [Campylobacter showae RM3277] gi|255300122|gb|EET79397.1| electron transport protein HydN [Campylobacter showae RM3277] Length = 248 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP +N + +H + CI C +C CP AI E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFDDNCIELHEEICIGCKLCTIACPYGAISSSAE 104 >gi|217077618|ref|YP_002335336.1| NADP-reducing hydrogenase, subunit c [Thermosipho africanus TCF52B] gi|217037473|gb|ACJ75995.1| NADP-reducing hydrogenase, subunit c [Thermosipho africanus TCF52B] Length = 602 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +YV+ E C+ C T C VCPV+ E + I D C+ CG C C AI T Sbjct: 541 SYVINPEKCVGC--TACARVCPVNAINGEVKKVHEIDQDACVKCGSCIEVCRFGAISKVT 598 Query: 60 EPGL 63 Sbjct: 599 PAVQ 602 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I+P++C+ C C CPV+AI + + E Sbjct: 542 YVINPEKCVGCTACARVCPVNAINGEVKKVHE 573 >gi|1353257|gb|AAB06234.1| dimethyl sulphoxide reductase subunit B [Haemophilus influenzae] Length = 205 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEP 61 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 61 YYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQK 120 Query: 62 GL 63 G Sbjct: 121 GH 122 >gi|299141262|ref|ZP_07034399.1| hypothetical protein HMPREF0665_00832 [Prevotella oris C735] gi|298577222|gb|EFI49091.1| hypothetical protein HMPREF0665_00832 [Prevotella oris C735] Length = 56 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CP EG + +I+P+ C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPAGAISEG-DIYSINPEACTECGTCADVCPNEAI 52 >gi|225572064|ref|ZP_03780928.1| hypothetical protein RUMHYD_00358 [Blautia hydrogenotrophica DSM 10507] gi|225040499|gb|EEG50745.1| hypothetical protein RUMHYD_00358 [Blautia hydrogenotrophica DSM 10507] Length = 584 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y +T+NC C C CPV + + I P+ CI CG CE C DA+K Sbjct: 530 YEITDNCKGCG--ACARKCPVGAISGEKKKVHSIDPNVCIKCGKCEESCKFDAVK 582 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 11/60 (18%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 D C CG C +CPV AI + + + PN+ K + K D VK Sbjct: 534 DNCKGCGACARKCPVGAISGEKKKVHSID-----------PNVCIKCGKCEESCKFDAVK 582 >gi|172039435|ref|YP_001805936.1| ferredoxin [Cyanothece sp. ATCC 51142] gi|171700889|gb|ACB53870.1| ferredoxin [Cyanothece sp. ATCC 51142] Length = 75 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTETCEGV--ADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAIVPEERPDLQK 72 >gi|210620710|ref|ZP_03292196.1| hypothetical protein CLOHIR_00139 [Clostridium hiranonis DSM 13275] gi|210155211|gb|EEA86217.1| hypothetical protein CLOHIR_00139 [Clostridium hiranonis DSM 13275] Length = 501 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 22/59 (37%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C E C I D+C CG C+ C DAI P Sbjct: 107 FTVTDLCRGCLAHRCKESCKFGAISYINGRAYIDQDKCKSCGACKKACQYDAISEMIRP 165 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 16/72 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDC--FYEGENFLAIHPDECIDCGV 45 Y+ + C C C VCP + + IH ++C++CG Sbjct: 137 AYIDQDKCKSCGACKKACQYDAISEMIRPCKSVCPTGALDINKDTSKAIIHEEKCVNCGA 196 Query: 46 CEPECPVDAIKP 57 C CP AI Sbjct: 197 CMSACPFGAISD 208 >gi|124485356|ref|YP_001029972.1| hypothetical protein Mlab_0531 [Methanocorpusculum labreanum Z] gi|124362897|gb|ABN06705.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanocorpusculum labreanum Z] Length = 367 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI+C C+ CP C ++I D CI C +C CP AI D + ++ Sbjct: 192 DKCIVCG--ACMNACPEFCISIAGKAVSIDLDHCIGCLMCMNTCPEHAIDLDWKDDGVVF 249 Query: 67 LKINSEYAT 75 ++ EYA Sbjct: 250 VERMIEYAA 258 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D+CI CG C CP I Sbjct: 189 ILEDKCIVCGACMNACPEFCI 209 >gi|24112977|ref|NP_707487.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|110805564|ref|YP_689084.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] gi|24051935|gb|AAN43194.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|110615112|gb|ABF03779.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] Length = 205 Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|331001648|ref|ZP_08325171.1| hypothetical protein HMPREF0491_00033 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413369|gb|EGG92736.1| hypothetical protein HMPREF0491_00033 [Lachnospiraceae oral taxon 107 str. F0167] Length = 507 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C EVCP + F +I+ ++CI CG C C +AI T P Sbjct: 117 VTDGCQGCLAHPCSEVCPTGAVKIDKESGFSSINQEKCIKCGRCANVCAYNAIIVQTRP 175 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C C +D EN A I D+C+ CG C CP Sbjct: 152 EKCIKCGRCANVCAYNAIIVQTRPCAASCGMDAISSDENGKADIDYDKCVSCGQCLVNCP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAISD 217 >gi|254478137|ref|ZP_05091520.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035999|gb|EEB76690.1| 4Fe-4S binding domain protein [Carboxydibrachium pacificum DSM 12653] Length = 203 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV + C C C+ CPV I CI CG C C IKP + Sbjct: 21 VVGKGCTAC--QMCIRNCPVGAISLVNGSAYIDHSICIGCGECVSMCQYGVIKPQWGTDM 78 Query: 64 ELWLKINSEYA 74 + +++ +EYA Sbjct: 79 DAFIERMTEYA 89 >gi|169334477|ref|ZP_02861670.1| hypothetical protein ANASTE_00880 [Anaerofustis stercorihominis DSM 17244] gi|169259194|gb|EDS73160.1| hypothetical protein ANASTE_00880 [Anaerofustis stercorihominis DSM 17244] Length = 207 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++C LC C++VC + E E I D C++CG C CP A+ Sbjct: 154 YEITDDCFLCG--KCIKVCSFNAIEEAEEKYKITEDNCLECGNCYSVCPAGAV 204 >gi|89074812|ref|ZP_01161266.1| hydrogenase 4 Fe-S subunit [Photobacterium sp. SKA34] gi|89049387|gb|EAR54949.1| hydrogenase 4 Fe-S subunit [Photobacterium sp. SKA34] Length = 204 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C EVCPV + + + ++ C+ C +C CP AI D Sbjct: 51 CRHCEDAPCAEVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFD 100 Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 32 FLAIHPDECIDCGVCEPEC 50 F+ PD+CI CG C C Sbjct: 4 FVVADPDKCIGCGTCMAAC 22 >gi|332298933|ref|YP_004440855.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] gi|332182036|gb|AEE17724.1| Ferredoxin hydrogenase [Treponema brennaborense DSM 12168] Length = 491 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+VT C C C+ C E I P++C++CG+C CP AI Sbjct: 112 YMVTNACQACLARPCMMNCAKKAIAITEGRARIDPEKCVNCGLCMQNCPYHAI 164 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 15/63 (23%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 E C+ C C E CPV + E I +CI CG C ECP Sbjct: 147 EKCVNCGLCMQNCPYHAIIKIPVPCEEACPVGAISKDETGKERIDYHKCIFCGNCMRECP 206 Query: 52 VDA 54 A Sbjct: 207 FGA 209 >gi|283795361|ref|ZP_06344514.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|291077019|gb|EFE14383.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|295091066|emb|CBK77173.1| hypothetical protein [Clostridium cf. saccharolyticum K10] Length = 262 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDT 59 Y +T+ CI C C +VCP CF+ P CI C C CP+ AI P+ Sbjct: 174 YQITDECIGCG--ICQKVCPKGCFHLEGQKSIWEPAGCISCMACIHACPMAAIHLTMPEK 231 Query: 60 EPGLE 64 P Sbjct: 232 NPKAR 236 >gi|193084380|gb|ACF10036.1| 4Fe-4S ferredoxin iron-sulfur binding protein [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 483 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ + C +CP + E+ + + CI C C CP DA+ D G Sbjct: 71 CNHCEDSPCTTICPTTALFTREDGIVDFDDERCIGCKSCMQACPYDALYIDPNKG 125 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 23/70 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCG---------VCEPECPV 52 E CI CK C++ CP D L I P++ C C C CP Sbjct: 101 ERCIGCK--SCMQACPYDA-------LYIDPNKGTAAKCNYCAHRIEHSYEPSCVIVCPT 151 Query: 53 DAIKPDTEPG 62 +AI Sbjct: 152 EAIVSGDLDD 161 >gi|126460205|ref|YP_001056483.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249926|gb|ABO09017.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 215 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+ CP Y+ E+ L ++ D CI CG C CP A Sbjct: 82 FVPKQCNHCENAPCVKPCPTGATYKTEDGLVLVNDDLCIGCGACIQACPYGA 133 >gi|90578228|ref|ZP_01234039.1| hydrogenase 4 Fe-S subunit [Vibrio angustum S14] gi|90441314|gb|EAS66494.1| hydrogenase 4 Fe-S subunit [Vibrio angustum S14] Length = 204 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C VCPV + + + ++ C+ C +C CP AI D Sbjct: 51 CRHCEDAPCAAVCPVQAISKQADRVVLNESLCVGCTLCAVACPFGAIAFD 100 Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 32 FLAIHPDECIDCGVCEPEC 50 F+ PD+CI CG C C Sbjct: 4 FVVPDPDKCIGCGTCMAAC 22 >gi|254974515|ref|ZP_05270987.1| iron-dependent hydrogenase [Clostridium difficile QCD-66c26] gi|255091906|ref|ZP_05321384.1| iron-dependent hydrogenase [Clostridium difficile CIP 107932] gi|255100005|ref|ZP_05328982.1| iron-dependent hydrogenase [Clostridium difficile QCD-63q42] gi|255305892|ref|ZP_05350064.1| iron-dependent hydrogenase [Clostridium difficile ATCC 43255] gi|255313640|ref|ZP_05355223.1| iron-dependent hydrogenase [Clostridium difficile QCD-76w55] gi|255516324|ref|ZP_05384000.1| iron-dependent hydrogenase [Clostridium difficile QCD-97b34] gi|255649423|ref|ZP_05396325.1| iron-dependent hydrogenase [Clostridium difficile QCD-37x79] gi|306519504|ref|ZP_07405851.1| iron-dependent hydrogenase [Clostridium difficile QCD-32g58] gi|328887576|emb|CAJ67726.2| putative iron-dependent hydrogenase [Clostridium difficile] Length = 496 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT+ C C C E C I+ + C CG+C+ C DAI P Sbjct: 105 FTVTDICRGCLAHRCKEACKFGAITHVGGMAYINHELCKACGMCKKACQYDAISEVVRP 163 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 18/104 (17%) Query: 1 MTYVVTENCILCK--------------HTDCVEVCPVDC-FYEGENF-LAIHPDECIDCG 44 M Y+ E C C C VCP + ++ EN IH D+C++CG Sbjct: 134 MAYINHELCKACGMCKKACQYDAISEVVRPCKSVCPTNALGFDRENMKAMIHEDKCLNCG 193 Query: 45 VCEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P ++ YA P IT + E+ Sbjct: 194 ACMSACPFGAISDKSLIAPVARKLVQKEKMYAVVAPAITGQVEA 237 >gi|260430223|ref|ZP_05784197.1| 4Fe-4S ferredoxin, iron-sulfur binding [Citreicella sp. SE45] gi|260418695|gb|EEX11951.1| 4Fe-4S ferredoxin, iron-sulfur binding [Citreicella sp. SE45] Length = 461 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C+++CP + + I P C CG C CP A+ D P Sbjct: 92 TRCLDLCPTGAILPDGDHVTIDPMICAGCGACSAACPSGAVSYDAPP 138 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 V T C LC CV +CP + + L D C+ CG+C CP DAI D Sbjct: 309 VDTGACTLCL--SCVSLCPSGALGDNPDLPQLRFQEDACLQCGICATVCPEDAITLD 363 Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 14/50 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF---------LAIHPDE---CIDCG 44 + C+ C C VCP D F ++ +E CI+CG Sbjct: 343 DACLQCG--ICATVCPEDAITLDPRFNLNESALSQEVLNEEEPFACIECG 390 >gi|59711966|ref|YP_204742.1| formate dehydrogenase N, beta subunit [Vibrio fischeri ES114] gi|197334851|ref|YP_002156159.1| formate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] gi|59480067|gb|AAW85854.1| formate dehydrogenase N, beta subunit [Vibrio fischeri ES114] gi|197316341|gb|ACH65788.1| formate dehydrogenase iron-sulfur subunit [Vibrio fischeri MJ11] Length = 202 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C+ C C VCP DCF E+ + H D CI CG C CP A + + Sbjct: 53 ISVACMHCTDAPCKAVCPADCFEHTEDGIVRHNKDLCIGCGYCLFACPFGAPQFPKQGAF 112 Query: 64 ELWLKIN 70 K++ Sbjct: 113 AERGKMD 119 >gi|308271987|emb|CBX28595.1| hypothetical protein N47_G39190 [uncultured Desulfobacterium sp.] Length = 1029 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V ++ C C CV VCP F + + I P +C CGVC ECP AI+ Sbjct: 954 ARVDSKKCAACL--ICVRVCPFGVPFINADGYSEIDPSKCHGCGVCASECPAKAIQ 1007 >gi|165977109|ref|YP_001652702.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307246598|ref|ZP_07528669.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165877210|gb|ABY70258.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306852470|gb|EFM84704.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 205 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C CV+VCP ++ + I + + CI C C CP DA + Sbjct: 60 AYYMSISCNHCDDPACVKVCPTGAMHKNADGFVIVNEETCIGCRYCSMACPYDAPQY 116 >gi|89897072|ref|YP_520559.1| hypothetical protein DSY4326 [Desulfitobacterium hafniense Y51] gi|89336520|dbj|BAE86115.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 460 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP N I C++CG+C CP AI Sbjct: 93 YSVTDHCQNCVGHFCFTNCPKKAILFINNKAFIDQTRCVECGLCARNCPYHAI 145 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 ++ C+ C C + CP E+ + +I C CG C Sbjct: 123 AFIDQTRCVECGLCARNCPYHAIIEYRRPCEDSCPTKAISVREDRIASIAEAHCTSCGKC 182 Query: 47 EPECPVDAI 55 CP A+ Sbjct: 183 IISCPFGAV 191 >gi|307689027|ref|ZP_07631473.1| NADH dehydrogenase (quinone) [Clostridium cellulovorans 743B] Length = 436 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 Y +T++C C T C+ VC VD I D+CI CG C C DAI Sbjct: 382 YYITDDCKGC--TKCMNVCAVDAINGQVRSRHIIDADKCIRCGACRKICSFDAI 433 >gi|87302718|ref|ZP_01085529.1| ferredoxin [Synechococcus sp. WH 5701] gi|87282601|gb|EAQ74559.1| ferredoxin [Synechococcus sp. WH 5701] Length = 74 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C + G+ F I+ D CIDCG+C CPV Sbjct: 1 MAHSIVTDICEGV--ADCVDACPVACIHPGQGANSKGTSFYWINFDTCIDCGICLQVCPV 58 Query: 53 -DAIKPDTEPGLE 64 AI P+ L+ Sbjct: 59 SGAILPEERADLQ 71 >gi|328952489|ref|YP_004369823.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452813|gb|AEB08642.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 352 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ ++C C C + CP+D EGE + + CI CGVC CP +AI Sbjct: 273 AHIDPDSCQACGV--CRDERCPMDAIEEGEGVYQVIDNRCIGCGVCVITCPGEAI 325 >gi|229588699|ref|YP_002870818.1| putative electron transpor-like protein [Pseudomonas fluorescens SBW25] gi|229360565|emb|CAY47422.1| putative electron transpor-related protein [Pseudomonas fluorescens SBW25] Length = 387 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 Y+ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 74 AYIREAECIGC--TKCIQACPVDAIVGAAKLMHTVII-DECTGCDLCVAPCPVDCIE 127 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 103 MHTVIIDECTGCDL--CVAPCPVDCIEM 128 >gi|224370172|ref|YP_002604336.1| HdrL3 [Desulfobacterium autotrophicum HRM2] gi|223692889|gb|ACN16172.1| HdrL3 [Desulfobacterium autotrophicum HRM2] Length = 1487 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 3/69 (4%) Query: 4 VVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V ENC C CV CP + E I P C CGVC ECP IK + Sbjct: 1415 VDPENCAACL--ICVRSCPYNVPVINAEGVSYIDPALCQGCGVCAAECPAKTIKLNWYED 1472 Query: 63 LELWLKINS 71 +L K+ + Sbjct: 1473 QQLLSKVEA 1481 Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 30 ENFLAIHPDECIDCGVCEPECPVD 53 EN + ++C CG C CPVD Sbjct: 105 ENPRYVDLEKCTSCGDCAKVCPVD 128 >gi|302343816|ref|YP_003808345.1| electron transfer flavoprotein alpha/beta-subunit [Desulfarculus baarsii DSM 2075] gi|301640429|gb|ADK85751.1| Electron transfer flavoprotein alpha/beta-subunit [Desulfarculus baarsii DSM 2075] Length = 405 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M ++ +N C C CV+ CP E + +A+ D C CG C CP AI D Sbjct: 1 MALIIDKNLCTGCG--SCVDACPFGAM-ELHDGVAVAGDGCTLCGACVDACPESAIGLDE 57 Query: 60 EPGLE 64 G + Sbjct: 58 PAGEQ 62 >gi|163849831|ref|YP_001637874.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium extorquens PA1] gi|163661436|gb|ABY28803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium extorquens PA1] Length = 679 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP A P L ++ Sbjct: 284 TRCLDVCPTGAIAPAGDTVAIDPYVCAGCGSCAAVCPTGAANYALPPADALMRRL 338 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I + Sbjct: 521 TEDCTLCL--SCVGACPTHALSDSTDRPLLAFEESLCVQCGLCAATCPEDVISLKPQIDF 578 Query: 64 ELWLK 68 E W + Sbjct: 579 EAWGE 583 >gi|261379385|ref|ZP_05983958.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria subflava NJ9703] gi|284797832|gb|EFC53179.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria subflava NJ9703] Length = 283 Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVAPCPVDCI--DMVPVSQPFL 136 Query: 68 KINSEYAT 75 ++T Sbjct: 137 PSARRFST 144 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 76 IDEAVCIGCTACIRACPVDAI 96 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV CPVDC Sbjct: 103 MHTVISDECTGCGL--CVAPCPVDCI 126 >gi|332088844|gb|EGI93956.1| dimethylsulfoxide reductase, chain B [Shigella boydii 5216-82] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|269105012|ref|ZP_06157708.1| hydrogenase 4 Fe-S subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268161652|gb|EEZ40149.1| hydrogenase 4 Fe-S subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 216 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C VCPV + ++ + ++ C+ C +C CP AI D Sbjct: 65 CRHCEDAPCAAVCPVQAITKQDDRVLLNETLCVGCTLCAVACPFGAIAFD 114 >gi|170768738|ref|ZP_02903191.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|170122286|gb|EDS91217.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|167752846|ref|ZP_02424973.1| hypothetical protein ALIPUT_01107 [Alistipes putredinis DSM 17216] gi|167659915|gb|EDS04045.1| hypothetical protein ALIPUT_01107 [Alistipes putredinis DSM 17216] Length = 56 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ + C+ C C++ CPV+ G + I PD+CIDCG C CP +AIKP+ Sbjct: 1 MAYKISPDLCVACG--TCIDECPVEAISAG-DVYVIDPDKCIDCGTCAGVCPSEAIKPE 56 >gi|149194135|ref|ZP_01871233.1| HYDROGENASE-3 SMALL SUBUNIT [Caminibacter mediatlanticus TB-2] gi|149136088|gb|EDM24566.1| HYDROGENASE-3 SMALL SUBUNIT [Caminibacter mediatlanticus TB-2] Length = 187 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V+ C C C VCPV GE+ + ++ + CI C +C CP AI+P E Sbjct: 48 MYGVMPNQCRQCDDAPCANVCPVGALRFGEDEIELYEEICIGCKLCSIACPFGAIRPAAE 107 Query: 61 P 61 Sbjct: 108 A 108 >gi|257372947|ref|YP_003175721.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] gi|257167671|gb|ACV49363.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halomicrobium mukohataei DSM 12286] Length = 257 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 M+Y T C C++ CV+VCPV+ Y+ E+ + I D+CI C C CP +A + Sbjct: 64 MSYQPT-ACQHCENAPCVKVCPVNATYKREDGIVEIDYDKCIGCRYCMAACPYNARVFNW 122 Query: 60 EPGL 63 + Sbjct: 123 DEPQ 126 >gi|227355469|ref|ZP_03839865.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|227164456|gb|EEI49340.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 209 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y +T +C C CV+ CP + G+ + + +C+ CG C CP A + +T Sbjct: 71 AYTLTISCNHCDDPICVKNCPTTAMHKRPGDGIVRVDTSKCVGCGYCSWSCPYGAPQMNT 130 Query: 60 EPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 E G + + N +A K +K KY Sbjct: 131 ETGQMSKCDFCVDLLAEGKNPICVDTCPLNAIKFGKIKDLRAKY 174 >gi|283787036|ref|YP_003366901.1| anaerobic reductase component [Citrobacter rodentium ICC168] gi|282950490|emb|CBG90155.1| putative anaerobic reductase component [Citrobacter rodentium ICC168] Length = 209 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + ++ D+C+ CG C CP A + DT Sbjct: 71 AYTMSISCNHCADPICTKNCPTTAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMDT 130 Query: 60 EPGL 63 + G Sbjct: 131 QAGQ 134 >gi|332295972|ref|YP_004437895.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179075|gb|AEE14764.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 259 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C CV+VCP ++ EN + ++CI CG C CP Sbjct: 73 CFHCGDPACVKVCPSGALFQAENGIVAFDENKCIACGYCHSACPFG 118 >gi|260655399|ref|ZP_05860887.1| iron-sulfur cluster-binding protein [Jonquetella anthropi E3_33 E1] gi|260629847|gb|EEX48041.1| iron-sulfur cluster-binding protein [Jonquetella anthropi E3_33 E1] Length = 387 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPD- 58 V E CI C C CPV G N I +CI C C CPV AI D Sbjct: 211 VAPEECIACG--RCARNCPVRAISMKNPAGANKAFIDQSKCIGCSECMTHCPVSAISIDW 268 Query: 59 -TEPGLELWLKINSEYA 74 +E + + +EYA Sbjct: 269 GSEEDRSAFGERMAEYA 285 Score = 41.7 bits (97), Expect = 0.039, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 17/31 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L++ P+ECI CG C CPV AI G Sbjct: 209 LSVAPEECIACGRCARNCPVRAISMKNPAGA 239 >gi|74317757|ref|YP_315497.1| putative tetrathionate reductase subunit B [Thiobacillus denitrificans ATCC 25259] gi|74057252|gb|AAZ97692.1| putative tetrathionate reductase subunit B [Thiobacillus denitrificans ATCC 25259] Length = 245 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 TY++ C C++ CV VCPV F + + + D C+ C C CP DA I + Sbjct: 89 TYMLPRLCNHCENPPCVPVCPVGATFKRDDGIVVVDGDRCVGCAYCVQACPYDARFINHE 148 Query: 59 TEPGLE 64 T + Sbjct: 149 TNKADK 154 >gi|309379085|emb|CBX22216.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 279 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRSCPADAIMGAGKFMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRSCPADAI 94 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|157364373|ref|YP_001471140.1| NADH dehydrogenase (quinone) [Thermotoga lettingae TMO] gi|157314977|gb|ABV34076.1| NADH dehydrogenase (quinone) [Thermotoga lettingae TMO] Length = 599 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ C+ C T C VCPV+ E I D CI CG C C AI Sbjct: 542 YVIDSAKCVGC--TACARVCPVNAISGEIRKTHVIDNDICIRCGSCIEVCRFGAI 594 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 I +C+ C C CPV+AI + Sbjct: 542 YVIDSAKCVGCTACARVCPVNAISGE 567 >gi|126460106|ref|YP_001056384.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249827|gb|ABO08918.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 187 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV VCP Y + L I+P CI C C CP +A D E GL Sbjct: 62 CQHCENAPCVTVCPTGASYRDVDGLVKINPALCIGCKYCMVACPYEARWLDEETGL 117 >gi|15789981|ref|NP_279805.1| HmoA [Halobacterium sp. NRC-1] gi|169235702|ref|YP_001688902.1| dimethylsulfoxide reductase subunit B (electron transfer protein) [Halobacterium salinarum R1] gi|10580399|gb|AAG19285.1| molybdopterin oxidoreductase [Halobacterium sp. NRC-1] gi|167726768|emb|CAP13554.1| dimethylsulfoxide reductase subunit B (electron transfer protein) [Halobacterium salinarum R1] Length = 262 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 MTY T C C++ CV+VCPV+ Y ++ + I D+C+ C C CP +A Sbjct: 64 MTYQPT-ACQHCENAPCVKVCPVNATYTRDDGIVEIDYDKCMGCRYCMAACPYNA 117 >gi|255525440|ref|ZP_05392378.1| nitroreductase [Clostridium carboxidivorans P7] gi|296187867|ref|ZP_06856261.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255510907|gb|EET87209.1| nitroreductase [Clostridium carboxidivorans P7] gi|296047824|gb|EFG87264.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 268 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP---- 61 E CI C CV CP+ GEN I+ D C+ CG C CP +AI P Sbjct: 9 EKCIKCG--ACVMECPISILRMGENGPEEIYEDRCMSCGHCVAVCPKEAIDNKKSPLSMQ 66 Query: 62 -GLELWLKINSEYATQW 77 + ++N+E A + Sbjct: 67 VNAKNLTRLNAEEAENF 83 Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 18/32 (56%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++ ++CI CG C ECP+ ++ E++ Sbjct: 6 LNKEKCIKCGACVMECPISILRMGENGPEEIY 37 >gi|212710427|ref|ZP_03318555.1| hypothetical protein PROVALCAL_01489 [Providencia alcalifaciens DSM 30120] gi|212686847|gb|EEB46375.1| hypothetical protein PROVALCAL_01489 [Providencia alcalifaciens DSM 30120] Length = 187 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP------DTEPG 62 C C C VCPV+ + ++ CI C +C CP AI P DT Sbjct: 33 CRQCDDAPCARVCPVNAITHENGMIVLNESLCIGCKLCGLVCPFGAITPSGSKPVDTPDF 92 Query: 63 LELWL 67 E ++ Sbjct: 93 FEQYV 97 >gi|332160309|ref|YP_004296886.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664539|gb|ADZ41183.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859581|emb|CBX69922.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica W22703] Length = 204 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ + D CI C C CP A + D Sbjct: 59 AYYLSIACNHCSDPACTKVCPTGAMHKRDDGFVVVSEDICIGCRYCHMACPYGAPQYDEA 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|331656967|ref|ZP_08357929.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] gi|331055215|gb|EGI27224.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA206] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 TY ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 TYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|15803004|ref|NP_289034.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|291283701|ref|YP_003500519.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. CB9615] gi|12516866|gb|AAG57591.1|AE005478_1 hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13362813|dbj|BAB36766.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|209763668|gb|ACI80146.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763670|gb|ACI80147.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763672|gb|ACI80148.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763674|gb|ACI80149.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|209763676|gb|ACI80150.1| hydrogenase 4 Fe-S subunit [Escherichia coli] gi|290763574|gb|ADD57535.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. CB9615] Length = 218 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ CV+VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCVQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|302348244|ref|YP_003815882.1| putative ATPase RIL [Acidilobus saccharovorans 345-15] gi|302328656|gb|ADL18851.1| putative ATPase RIL [Acidilobus saccharovorans 345-15] Length = 601 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 13/64 (20%) Query: 4 VV-TENCI--LCKHTDCVEVCPV-----DCFYEGENFL----AIHPDECIDCGVCEPECP 51 V+ ++ C C + C+ VCP+ D E + IH D CI CG+C CP Sbjct: 6 VIDSDECKPKRCSYQ-CISVCPINKSKKDVAIEADTKARAKPVIHEDVCIGCGLCVKACP 64 Query: 52 VDAI 55 DAI Sbjct: 65 FDAI 68 >gi|148270023|ref|YP_001244483.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga petrophila RKU-1] gi|147735567|gb|ABQ46907.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermotoga petrophila RKU-1] Length = 357 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVV E C+ C C + CPV I ++CI CG C C A+ P + Sbjct: 188 PYVVEEKCVACG--TCAKFCPVGAITVT-KVAKIDYEKCIGCGQCIAMCSYGAMSPKWDS 244 Query: 62 GLELWLKINSEYAT 75 + K +EYA Sbjct: 245 STDSLSKKMAEYAK 258 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E+ + ++C+ CG C CPV AI Sbjct: 185 ESKPYVVEEKCVACGTCAKFCPVGAI 210 >gi|325968088|ref|YP_004244280.1| Fe-S-cluster-containing hydrogenase components 1 [Vulcanisaeta moutnovskia 768-28] gi|323707291|gb|ADY00778.1| Fe-S-cluster-containing hydrogenase components 1 [Vulcanisaeta moutnovskia 768-28] Length = 263 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C CK+ CV VCP Y + + I+ + CI C CE CP I D Sbjct: 70 TFSVPISCFQCKNPACVTVCPTGAIYKRREDGVVVINYEVCIGCRYCENACPYGNIIFDP 129 Query: 60 EPGLELW--LKINSEYATQWP 78 G+ + I+ Y P Sbjct: 130 VEGVSKKCVMAIDRVYDESLP 150 >gi|227499762|ref|ZP_03929862.1| ferredoxin [Anaerococcus tetradius ATCC 35098] gi|227218148|gb|EEI83414.1| ferredoxin [Anaerococcus tetradius ATCC 35098] Length = 57 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI + Sbjct: 1 MAYRIDENTCISCG--SCEGECPVGAIAQGDAAYEIDADACIDCGSCAAVCPVEAIDQE 57 >gi|261378107|ref|ZP_05982680.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria cinerea ATCC 14685] gi|269145561|gb|EEZ71979.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria cinerea ATCC 14685] Length = 279 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 71 LAWIDESACIGC--TACIRACPTDAIMGASKFMHTVIADECTGCGLCIAPCPVDCIH 125 >gi|307267356|ref|ZP_07548851.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917614|gb|EFN47893.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 154 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C +CV VCP D + I P++C DCG C CPV AI Sbjct: 109 CIGCG--NCVRVCPFDAIELKDGIAYIDPNKCRDCGRCIDICPVGAI 153 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + CI CG C CP DAI+ Sbjct: 104 VDESVCIGCGNCVRVCPFDAIE 125 >gi|282600016|ref|ZP_05972728.2| electron transport protein HydN [Providencia rustigianii DSM 4541] gi|282566768|gb|EFB72303.1| electron transport protein HydN [Providencia rustigianii DSM 4541] Length = 206 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP ++F+ + +CI C C CP ++ + P + Sbjct: 83 CRQCEDAPCANVCPNGAISRKDDFVYVDQAKCIGCKTCVIACPYGTMEVISRPVEQQVTA 142 Query: 69 IN 70 +N Sbjct: 143 LN 144 >gi|197121507|ref|YP_002133458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|220916274|ref|YP_002491578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|196171356|gb|ACG72329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|219954128|gb|ACL64512.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 100 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 15/90 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE CI C C CP +G++ I+PD C +C C CPVD Sbjct: 1 MATFITEECINCG--ACEPECPNSAISQGDDIYVINPDLCTECVGFHGEEACAAVCPVDC 58 Query: 55 IKPD---TEPGLELWLKINSEYATQWPNIT 81 PD TE + + K+ AT P+ T Sbjct: 59 CVPDPNRTETEEQNYGKL----ATIHPDKT 84 >gi|295677023|ref|YP_003605547.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1002] gi|295436866|gb|ADG16036.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1002] Length = 412 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAI 64 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDDN 40 >gi|126732920|ref|ZP_01748710.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126706626|gb|EBA05701.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 649 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C+++CP +++ P C CG C CP AI D P Sbjct: 280 TRCLDLCPTGAITPDGEHVSVDPLICAGCGACSAVCPSGAISYDAPP 326 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V + C LC CV +CP + + L D C+ CG+C CP +AI Sbjct: 498 VDQDACTLCL--SCVSLCPSGALGDNPDRPELRFQEDACLQCGLCANVCPEEAI 549 >gi|219667057|ref|YP_002457492.1| hydrogenase large subunit domain protein [Desulfitobacterium hafniense DCB-2] gi|219537317|gb|ACL19056.1| hydrogenase large subunit domain protein [Desulfitobacterium hafniense DCB-2] Length = 454 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++C C C CP N I C++CG+C CP AI Sbjct: 87 YSVTDHCQNCVGHFCFTNCPKKAILFINNKAFIDQTRCVECGLCARNCPYHAI 139 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 15/69 (21%) Query: 2 TYVVTENCILCKHTD--------------CVEVCPVDCFYEGENFL-AIHPDECIDCGVC 46 ++ C+ C C + CP E+ + +I C CG C Sbjct: 117 AFIDQTRCVECGLCARNCPYHAIIEYRRPCEDSCPTKAISVREDRIASIAEAHCTSCGKC 176 Query: 47 EPECPVDAI 55 CP A+ Sbjct: 177 IISCPFGAV 185 >gi|121534126|ref|ZP_01665951.1| NADH dehydrogenase (quinone) [Thermosinus carboxydivorans Nor1] gi|121307229|gb|EAX48146.1| NADH dehydrogenase (quinone) [Thermosinus carboxydivorans Nor1] Length = 596 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +TE C C C + CPV+ E + +I+ +CI CG C +CP AI Sbjct: 542 YQITELCKGCGL--CKKACPVEAISGEIKGRHSINQAKCIKCGACMAKCPFKAI 593 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + C CG+C+ CPV+AI + + Sbjct: 546 ELCKGCGLCKKACPVEAISGEIK 568 >gi|254520090|ref|ZP_05132146.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913839|gb|EEH99040.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 634 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++CI C T C+ CPV I+ D+CI CG+C CP AI Sbjct: 574 YEVTDSCIGC--TKCLRACPVLAIKGKIREKHIINIDKCIRCGLCYEACPTKAI 625 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 11/19 (57%), Positives = 11/19 (57%) Query: 38 DECIDCGVCEPECPVDAIK 56 D CI C C CPV AIK Sbjct: 578 DSCIGCTKCLRACPVLAIK 596 >gi|117619673|ref|YP_857013.1| hydrogenase-4 component A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561080|gb|ABK38028.1| hydrogenase-4 component A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 221 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C +VCPV+ + + + ++ CI C +C CP AI+ Sbjct: 51 CRHCDDAPCSKVCPVEAIRQTGDCVQLNESLCIGCNLCAVACPFGAIQ 98 >gi|332762950|gb|EGJ93200.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-671] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|223985321|ref|ZP_03635396.1| hypothetical protein HOLDEFILI_02702 [Holdemania filiformis DSM 12042] gi|223962708|gb|EEF67145.1| hypothetical protein HOLDEFILI_02702 [Holdemania filiformis DSM 12042] Length = 202 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +T+NC C C+ C D G + I +C +CG C CP +AI P Sbjct: 105 ITDNCRKCMAKACLASCKFDAISMGLHRAQIDYTKCKECGACARSCPYNAIVVTERP 161 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 I+ C + CPVD EN +A I +CI+CG C+ CP AI+ Sbjct: 155 IVVTERPCSQHCPVDAIRWDENGIAQIDETKCINCGACQAACPFGAIE 202 >gi|164686864|ref|ZP_02210892.1| hypothetical protein CLOBAR_00460 [Clostridium bartlettii DSM 16795] gi|164604254|gb|EDQ97719.1| hypothetical protein CLOBAR_00460 [Clostridium bartlettii DSM 16795] Length = 273 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V E CI C + CV+ CPV +N I+ + C CG C CPV+A+ D Sbjct: 1 MFSVNKEKCIGC--SQCVKDCPVSTISLVDNKAEINNERCFKCGHCIAICPVEAVSTDD 57 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 +++ ++CI C C +CPV I +IN+E Sbjct: 1 MFSVNKEKCIGCSQCVKDCPVSTISLVDNKA-----EINNE 36 >gi|317483797|ref|ZP_07942737.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924900|gb|EFV46046.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 419 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 6 TENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +C C C +VCPV+ + G+ F + P+ CI CGVC C + + Sbjct: 287 GNDCRGCG--KCEKVCPVNAIHMEDGPAGKRFAFVDPERCIGCGVCVRSCAFGQLTLEAR 344 Query: 61 PG 62 P Sbjct: 345 PE 346 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 ++C CG CE CPV+AI + P + + ++ E Sbjct: 288 NDCRGCGKCEKVCPVNAIHMEDGPAGKRFAFVDPE 322 >gi|315651297|ref|ZP_07904325.1| Fe-hydrogenase large subunit family protein [Eubacterium saburreum DSM 3986] gi|315486449|gb|EFU76803.1| Fe-hydrogenase large subunit family protein [Eubacterium saburreum DSM 3986] Length = 507 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C EVCP + F +I+ ++CI CG C C +AI T P Sbjct: 117 VTNGCQGCLAHPCAEVCPTGAVKIDKESGFSSINQEKCIKCGRCANVCAYNAIIIQTRP 175 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C C +D EN A I D+C+ CG C CP Sbjct: 152 EKCIKCGRCANVCAYNAIIIQTRPCAASCGMDAISSDENGKADIDYDKCVSCGQCLVNCP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAISD 217 >gi|288572802|ref|ZP_06391159.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568543|gb|EFC90100.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] Length = 589 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y++ E CI C T C + CPVD E + I CI CG C+ CPV AI + Sbjct: 534 YIIDPEKCIGC--TKCAKNCPVDAISGEIKKPHVIDDSICIRCGKCKVSCPVGAISVE 589 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 13/63 (20%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M ++V C VCP I P++CI C C CPVDAI + + Sbjct: 515 MAHIVDHRCP-------ATVCP------SLIHYIIDPEKCIGCTKCAKNCPVDAISGEIK 561 Query: 61 PGL 63 Sbjct: 562 KPH 564 >gi|254424789|ref|ZP_05038507.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] gi|196192278|gb|EDX87242.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] Length = 74 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M++ +VT C DCV+ CPV C +EG ++ I D CIDCG+C CPV Sbjct: 1 MSHTIVTNVCEGV--ADCVDACPVACIHEGPGKNKKGTDWYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ +P L+ Sbjct: 59 EGAILPEEKPELQK 72 >gi|38704092|ref|NP_311370.2| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|168748463|ref|ZP_02773485.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4113] gi|168756250|ref|ZP_02781257.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4401] gi|168761087|ref|ZP_02786094.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4501] gi|168768570|ref|ZP_02793577.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4486] gi|168773608|ref|ZP_02798615.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4196] gi|168778444|ref|ZP_02803451.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4076] gi|168787824|ref|ZP_02812831.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC869] gi|168798849|ref|ZP_02823856.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC508] gi|195936624|ref|ZP_03082006.1| hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. EC4024] gi|208807942|ref|ZP_03250279.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4206] gi|208813253|ref|ZP_03254582.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4045] gi|208821290|ref|ZP_03261610.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4042] gi|209397372|ref|YP_002271950.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4115] gi|217327252|ref|ZP_03443335.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. TW14588] gi|254794426|ref|YP_003079263.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. TW14359] gi|261223086|ref|ZP_05937367.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259362|ref|ZP_05951895.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. FRIK966] gi|187770591|gb|EDU34435.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4196] gi|188017141|gb|EDU55263.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4113] gi|189003522|gb|EDU72508.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4076] gi|189356587|gb|EDU75006.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4401] gi|189362213|gb|EDU80632.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4486] gi|189368471|gb|EDU86887.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4501] gi|189372351|gb|EDU90767.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC869] gi|189378564|gb|EDU96980.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC508] gi|208727743|gb|EDZ77344.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4206] gi|208734530|gb|EDZ83217.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4045] gi|208741413|gb|EDZ89095.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4042] gi|209158772|gb|ACI36205.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. EC4115] gi|217319619|gb|EEC28044.1| hydrogenase-4 component A [Escherichia coli O157:H7 str. TW14588] gi|254593826|gb|ACT73187.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O157:H7 str. TW14359] gi|320188813|gb|EFW63472.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. EC1212] gi|320640985|gb|EFX10469.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. G5101] gi|320646267|gb|EFX15194.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H- str. 493-89] gi|320651773|gb|EFX20153.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H- str. H 2687] gi|320657158|gb|EFX24967.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662764|gb|EFX30096.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320667804|gb|EFX34715.1| Hydrogenase 4 Fe-S subunit [Escherichia coli O157:H7 str. LSU-61] gi|326340276|gb|EGD64080.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. 1125] gi|326344961|gb|EGD68705.1| Hydrogenase-4 component A [Escherichia coli O157:H7 str. 1044] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ CV+VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCVQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|317490085|ref|ZP_07948574.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833846|ref|ZP_08166196.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] gi|316910790|gb|EFV32410.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485204|gb|EGC87676.1| anaerobic dimethyl sulfoxide reductase chain B [Eggerthella sp. HGA1] Length = 219 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 ++ ++ +C+ C+ C+ VCP + + + ++PD CI C C CP + K ++ Sbjct: 96 SFFISTSCMHCEEPSCMRVCPAGAISKDAHGIVKVNPDVCIGCKYCFQACPYEVPKYNS 154 >gi|315931016|gb|EFV09991.1| formate dehydrogenase iron-sulfur subunit [Campylobacter jejuni subsp. jejuni 327] Length = 200 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C+ C C VCPVDCFY + + +H E CI CG C CP A + + Sbjct: 52 SCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKD 105 >gi|293376713|ref|ZP_06622936.1| protein HymB [Turicibacter sanguinis PC909] gi|325845200|ref|ZP_08168508.1| protein HymB [Turicibacter sp. HGF1] gi|292644670|gb|EFF62757.1| protein HymB [Turicibacter sanguinis PC909] gi|325488796|gb|EGC91197.1| protein HymB [Turicibacter sp. HGF1] Length = 606 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 13/64 (20%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE---------GENFLAIHPDECIDCGVCEPECP-- 51 Y +T+ CI C C + CP C G I+ +CI CG C CP Sbjct: 542 YFITDKCIGCG--MCAKACPASCIKPVGEVVNEKTGRRRHVINKVDCIKCGACMATCPPK 599 Query: 52 VDAI 55 + AI Sbjct: 600 ISAI 603 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 13/24 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAIKP 57 D+CI CG+C CP IKP Sbjct: 542 YFITDKCIGCGMCAKACPASCIKP 565 >gi|225028997|ref|ZP_03718189.1| hypothetical protein EUBHAL_03289 [Eubacterium hallii DSM 3353] gi|224953695|gb|EEG34904.1| hypothetical protein EUBHAL_03289 [Eubacterium hallii DSM 3353] Length = 506 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT+ C C C+EVCP I D CI CG C C +AI P Sbjct: 116 VTDGCQGCLAHPCMEVCPKKAISLDRVTGKSIIDQDACIKCGRCATVCSYNAIIVQERP 174 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHTD--------------CVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 + CI C C + C + EN I D+C+ CG+C CP Sbjct: 151 DACIKCGRCATVCSYNAIIVQERPCAKACGMKAITSDENGKATIDYDKCVSCGMCLVNCP 210 Query: 52 VDAIKP 57 AI Sbjct: 211 FGAISD 216 >gi|313667518|ref|YP_004047802.1| ferredoxin [Neisseria lactamica ST-640] gi|313004980|emb|CBN86408.1| putative ferredoxin [Neisseria lactamica 020-06] Length = 279 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D F+ + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKFMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|315922949|ref|ZP_07919189.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. D2] gi|313696824|gb|EFS33659.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. D2] Length = 403 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 19/101 (18%) Query: 1 MTYVV---TE-NCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECP 51 M++V T+ C C C++VC + Y+G ++ I +C+ CG+CE CP Sbjct: 1 MSFVPRLATDKQCTGC--FACIDVCNKNAINIVEHYDGHRYVEIDKSKCVGCGMCEQICP 58 Query: 52 VDAIKPDTEPGLELWLKINSEYATQW-PNITTKKESLPSAA 91 I + E + S++ W N T +K S A Sbjct: 59 ---IVSNFEYQKSEY----SDFYAAWAKNRTHRKTSASGGA 92 >gi|260592587|ref|ZP_05858045.1| conserved domain protein [Prevotella veroralis F0319] gi|260535357|gb|EEX17974.1| conserved domain protein [Prevotella veroralis F0319] Length = 56 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C++ CPV+ EG + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCIDECPVEAISEG-DIYKIDADACTECGTCASVCPNEAI 52 >gi|119720028|ref|YP_920523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525148|gb|ABL78520.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 187 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y++ C C++ CV VCP Y + L I+PD CI C C CP Sbjct: 55 PYILLVQCQHCENAPCVAVCPTGASYIDRDGLVKINPDLCIGCKYCMTACPYG 107 >gi|140661|sp|P20925|YFRA_PROVU RecName: Full=Frd operon probable iron-sulfur subunit A gi|1333800|emb|CAA29509.1| unnamed protein product [Proteus vulgaris] Length = 157 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +++ + D+CI C C CP ++ + P + Sbjct: 34 CHQCEDAPCANVCPNGAIIHNKDYYYVDQDKCIGCKTCVLACPYGTMEVVSRPVMRKLTA 93 Query: 69 IN 70 +N Sbjct: 94 LN 95 >gi|331646162|ref|ZP_08347265.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] gi|330910677|gb|EGH39187.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli AA86] gi|331044914|gb|EGI17041.1| dimethylsulfoxide reductase, chain B [Escherichia coli M605] Length = 205 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ L + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGLVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|118602832|ref|YP_904047.1| twin-arginine translocation pathway signal [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567771|gb|ABL02576.1| Twin-arginine translocation pathway signal [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 243 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C CK CV+VCP + + E+ + + CI C C CP DA Sbjct: 109 CQHCKEPPCVDVCPTNASMKREDGIVLVDKHLCIGCRYCMMACPYDA 155 >gi|332981894|ref|YP_004463335.1| electron transfer flavoprotein subunit alpha [Mahella australiensis 50-1 BON] gi|332699572|gb|AEE96513.1| Electron transfer flavoprotein alpha subunit [Mahella australiensis 50-1 BON] Length = 397 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ ENC C CV CP + I D C CG C C DAI E G Sbjct: 5 IIEENCTGC--AVCVRACPFGAIKMENDKAVIL-DNCTLCGSCADACKFDAIDFQAERG 60 >gi|317499378|ref|ZP_07957646.1| glycyl-radical enzyme activating protein family [Lachnospiraceae bacterium 5_1_63FAA] gi|316893347|gb|EFV15561.1| glycyl-radical enzyme activating protein family [Lachnospiraceae bacterium 5_1_63FAA] Length = 300 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C C C VCP G++ I P +C C C CP A+ + E Sbjct: 54 EKCAHCG--TCTHVCPNQAISMGDDSYVGIDPSKCAGCLQCVKNCPAKALSYEGEAKD 109 >gi|315925914|ref|ZP_07922119.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315620735|gb|EFV00711.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 222 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + V E CI C +C VCP C I + C+ CG C CPV I+ Sbjct: 148 FFVGEGCIGC--RNCSVVCPQSCIDSSSIPAVIDQNRCLHCGRCAEACPVGVIE 199 >gi|218780182|ref|YP_002431500.1| nitrite and sulphite reductase 4Fe-4S region [Desulfatibacillum alkenivorans AK-01] gi|218761566|gb|ACL04032.1| Putative dissimilatory sulfite reductase [Desulfatibacillum alkenivorans AK-01] Length = 287 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +NC+ C C E CP ++ P C C C CP D I + + G Sbjct: 175 DNCVDCGD--CAESCPDQAIIMKDDRPVYDPHACQGCFNCSQACPADCISLEEKGG 228 >gi|218778023|ref|YP_002429341.1| glycyl-radical enzyme activating protein family [Desulfatibacillum alkenivorans AK-01] gi|218759407|gb|ACL01873.1| Pyruvate formate lyase activating enzyme [Desulfatibacillum alkenivorans AK-01] Length = 317 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 6/75 (8%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE---- 60 + CI C CVEVCP + + + I C CG C ECP A++ E Sbjct: 50 IGSRCIGC--RSCVEVCPHNALELTQEGMQIDRGLCEGCGRCADECPSTAMEMLGEDRTL 107 Query: 61 PGLELWLKINSEYAT 75 L L+ + Y Sbjct: 108 EDLAAELEKDRAYFE 122 >gi|15642809|ref|NP_227850.1| iron-sulfur cluster-binding protein [Thermotoga maritima MSB8] gi|170288707|ref|YP_001738945.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga sp. RQ2] gi|281412096|ref|YP_003346175.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga naphthophila RKU-10] gi|4980519|gb|AAD35128.1|AE001691_2 iron-sulfur cluster-binding protein [Thermotoga maritima MSB8] gi|170176210|gb|ACB09262.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga sp. RQ2] gi|281373199|gb|ADA66761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga naphthophila RKU-10] Length = 357 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YVV E C+ C C + CPV I ++CI CG C C A+ P + Sbjct: 188 PYVVEEKCVACG--TCAKFCPVGAITVT-KVAKIDYEKCIGCGQCIAMCSYGAMSPKWDS 244 Query: 62 GLELWLKINSEYAT 75 + K +EYA Sbjct: 245 STDSLSKKMAEYAK 258 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E+ + ++C+ CG C CPV AI Sbjct: 185 ESKPYVVEEKCVACGTCAKFCPVGAI 210 >gi|325478783|gb|EGC81894.1| ferredoxin [Anaerococcus prevotii ACS-065-V-Col13] Length = 57 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI + Sbjct: 1 MAYRIDENTCISCG--TCEGECPVGAISQGDAAYEIDADACIDCGSCAAVCPVEAIDQE 57 >gi|303243458|ref|ZP_07329800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302486019|gb|EFL48941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 151 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 33/56 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C++ C+ +CPV+ Y EN ++ + CI CG+CE CP+ AI + + + Sbjct: 42 CMQCENAPCMNICPVNAIYLKENIPIVNKERCIGCGMCEIACPIGAIFIEEKVAHK 97 >gi|91772585|ref|YP_565277.1| CoB--CoM heterodisulfide reductase subunit A [Methanococcoides burtonii DSM 6242] gi|91711600|gb|ABE51527.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A with C-terminal mvhD-like electron transfer domain [Methanococcoides burtonii DSM 6242] Length = 786 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 19/83 (22%) Query: 3 YVVTENCILCKHTDCVEVCPVD---CFYEG---------------ENFLAIHPDECIDCG 44 YV+ +NC C +C VCPVD F G I+ D C+ CG Sbjct: 237 YVIIDNCKGCID-ECARVCPVDISNPFDSGLGKTKAINMPIPQAIPQTAFINSDYCVGCG 295 Query: 45 VCEPECPVDAIKPDTEPGLELWL 67 +C+ CP DAI + + + Sbjct: 296 LCKQACPADAIDFNMKAEEFTFT 318 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E CI C C + C + + + C CG C CPVDAI Sbjct: 573 ACVDAEKCIGC--RMCEDTCNFNTIKVIDGKAVVDEISCQTCGSCSASCPVDAIDMPHST 630 Query: 62 GLELWLKINSEY 73 ++ +I + Sbjct: 631 DAQIKAQIRAAL 642 >gi|145756|gb|AAA83844.1| anaerobic dimethyl sulfoxide reductase [Escherichia coli] Length = 207 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|331000171|ref|ZP_08323861.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] gi|329572656|gb|EGG54291.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] Length = 194 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y V C C CV+VCP + E + + I +CI CG C CP A D Sbjct: 61 YYVPVGCNECADPACVKVCPTKAHFKRESDGLVLIDEKKCIGCGACAQACPYGAPVLDE 119 >gi|308049671|ref|YP_003913237.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307631861|gb|ADN76163.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 205 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y V+ C C + CVEVCPV + + + + P CI C C CP DA + D Sbjct: 63 SYYVSIGCNHCDNPVCVEVCPVGSMHKRRSDGLVHVDPAVCIGCEACAFACPYDAPQFDR 122 Query: 60 EPG 62 E G Sbjct: 123 ERG 125 >gi|218779472|ref|YP_002430790.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfatibacillum alkenivorans AK-01] gi|218760856|gb|ACL03322.1| Putative fusion protein, heterodisulfide reductase (HdrA) /F420-non-reducing hydrogenase (MvhD) [Desulfatibacillum alkenivorans AK-01] Length = 814 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+TE+C C C EVCP + ++ C CG C ECP AI + Sbjct: 594 VITEHCKACG--KCAEVCPYNAISVDPKKKIPAVVNTAACAGCGTCGAECPFGAITMNHY 651 Query: 61 PGLELWLKINSEYAT 75 ++ ++++ A Sbjct: 652 TDAQITNQVDTMLAE 666 Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 25/84 (29%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECID-- 42 YVV C C +C +VCPV D F G + I+ +EC+ Sbjct: 252 YVVEGECTACG--ECAKVCPVVRPDEFNLGLSSRKAIYSPFPQAVPSSYVININECLGDN 309 Query: 43 ---CGVCEPECPVDAIKPDTEPGL 63 C C C + I Sbjct: 310 PSVCAKCVQACEKNCINFHMSDEQ 333 >gi|322419390|ref|YP_004198613.1| electron transfer flavoprotein alpha/beta-subunit [Geobacter sp. M18] gi|320125777|gb|ADW13337.1| Electron transfer flavoprotein alpha/beta-subunit [Geobacter sp. M18] Length = 437 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTE 60 V+T CI C C VCPV+ E I ++CI C C CP A++ Sbjct: 14 ARVITGKCIACGAR-CQSVCPVNGVEMSEQGEPIIEAEKCIGCVKCVKVCPAGALEMFYT 72 Query: 61 PGL 63 P Sbjct: 73 PEE 75 >gi|17230406|ref|NP_486954.1| hypothetical protein asl2914 [Nostoc sp. PCC 7120] gi|75907209|ref|YP_321505.1| 4Fe-4S ferredoxin [Anabaena variabilis ATCC 29413] gi|17132008|dbj|BAB74613.1| asl2914 [Nostoc sp. PCC 7120] gi|75700934|gb|ABA20610.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anabaena variabilis ATCC 29413] Length = 74 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTDVCEGV--ADCVDACPVACIHEGPGKNVKGTDWYWIDFSTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EKAIVPEERPDLQK 72 >gi|312959250|ref|ZP_07773768.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens WH6] gi|311286510|gb|EFQ65073.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens WH6] Length = 320 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 74 AYIREAECIGC--TKCIQACPVDAIVGAAKLMHTVISDECTGCDLCVAPCPVDCIE 127 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE 30 M V+++ C C CV CPVDC Sbjct: 103 MHTVISDECTGCDL--CVAPCPVDCIEMRP 130 >gi|282896688|ref|ZP_06304696.1| 4Fe-4S ferredoxin, iron-sulfur binding [Raphidiopsis brookii D9] gi|281198406|gb|EFA73294.1| 4Fe-4S ferredoxin, iron-sulfur binding [Raphidiopsis brookii D9] Length = 75 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTEICQGV--ADCVAACPVACIHEGPGKNIQGTDWYWIDFTTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P P L+ Sbjct: 59 EGAIVPQERPELQK 72 >gi|187733724|ref|YP_001880344.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|187430716|gb|ACD09990.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] Length = 148 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C C CP A + + E Sbjct: 3 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAE 62 Query: 61 PGL 63 G Sbjct: 63 KGH 65 >gi|150006680|ref|YP_001301423.1| putative hydrogenase [Parabacteroides distasonis ATCC 8503] gi|149935104|gb|ABR41801.1| putative hydrogenase [Parabacteroides distasonis ATCC 8503] Length = 478 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I + CI CG C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAEIDHETCISCGKCHQSCPYHAIVY 169 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 E CI C C EVCPV + + + I +CI CG C CP Sbjct: 150 ETCISCGKCHQSCPYHAIVYIPIPCEEVCPVKAISKDKYGVEHIDESKCIYCGKCVNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|153003731|ref|YP_001378056.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027304|gb|ABS25072.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 309 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C+ C+E CP E + + PD C CG C CP I+ E G Sbjct: 126 SDVCKHCERAGCLEACPTGAIVRTEFGSVYVQPDVCNGCGYCVSACPFGVIERREEDG 183 >gi|329936419|ref|ZP_08286184.1| ferredoxin iron-sulfur binding domain protein [Streptomyces griseoaurantiacus M045] gi|329304215|gb|EGG48096.1| ferredoxin iron-sulfur binding domain protein [Streptomyces griseoaurantiacus M045] Length = 337 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP + E + + D C CG C P CP I+ + G Sbjct: 148 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQEDVCNGCGYCVPACPYGVIEQRPDDG 205 >gi|257792589|ref|YP_003183195.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476486|gb|ACV56806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 213 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP C + + + +HPD+CI C C CP A++ TE Sbjct: 58 CHHCAEAPCVDACPTGCLFTDDEHVGVHPDKCIGCRNCVLACPYGAVEIVTE 109 >gi|154249675|ref|YP_001410500.1| NADH dehydrogenase (quinone) [Fervidobacterium nodosum Rt17-B1] gi|154153611|gb|ABS60843.1| NADH dehydrogenase (quinone) [Fervidobacterium nodosum Rt17-B1] Length = 610 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +YV++ E C+ C T C VCP + + + I + C+ CG C C AI T Sbjct: 544 SYVISPEKCVGC--TACARVCPTNAIHGEVRKVHEIDQEACVRCGSCIEVCRFGAISKVT 601 Query: 60 EP 61 Sbjct: 602 PA 603 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I P++C+ C C CP +AI + E Sbjct: 545 YVISPEKCVGCTACARVCPTNAIHGEVRKVHE 576 >gi|260913421|ref|ZP_05919900.1| anaerobic dimethyl sulfoxide reductase [Pasteurella dagmatis ATCC 43325] gi|260632495|gb|EEX50667.1| anaerobic dimethyl sulfoxide reductase [Pasteurella dagmatis ATCC 43325] Length = 205 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV VCP ++ + I + D CI C C CP DA + D Sbjct: 60 SYYMSISCNHCDNPACVTVCPTGAMHKNADGFVIVNEDICIGCRYCHMACPYDAPQYDV 118 >gi|170696011|ref|ZP_02887149.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia graminis C4D1M] gi|170139091|gb|EDT07281.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia graminis C4D1M] Length = 413 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 19/94 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C E CP+D +N + D C C C P CP AI K D Sbjct: 18 EICIRCN--TCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAIDNWRTVLKADA 75 Query: 60 EPGLELWLKINSEYATQWPNITTKKE-SLPSAAK 92 P E + W + + ++P+A + Sbjct: 76 YPIEEQF---------TWDVLPEQNTMAVPAADE 100 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDDN 40 >gi|46198462|ref|YP_004129.1| nrfC protein [Thermus thermophilus HB27] gi|190016225|pdb|2VPW|B Chain B, Polysulfide Reductase With Bound Menaquinone gi|190016228|pdb|2VPW|F Chain F, Polysulfide Reductase With Bound Menaquinone gi|190016231|pdb|2VPX|B Chain B, Polysulfide Reductase With Bound Quinone (Uq1) gi|190016234|pdb|2VPX|F Chain F, Polysulfide Reductase With Bound Quinone (Uq1) gi|190016237|pdb|2VPY|B Chain B, Polysulfide Reductase With Bound Quinone Inhibitor, Pentachlorophenol (Pcp) gi|190016240|pdb|2VPY|F Chain F, Polysulfide Reductase With Bound Quinone Inhibitor, Pentachlorophenol (Pcp) gi|190016243|pdb|2VPZ|B Chain B, Polysulfide Reductase Native Structure gi|190016246|pdb|2VPZ|F Chain F, Polysulfide Reductase Native Structure gi|46196084|gb|AAS80502.1| nrfC protein [Thermus thermophilus HB27] Length = 195 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 E C+ C++ CV VCP Y+ ++ L + P +CI CG C CP DA Sbjct: 56 EQCLHCENPPCVPVCPTGASYQTKDGLVLVDPKKCIACGACIAACPYDA 104 >gi|212696414|ref|ZP_03304542.1| hypothetical protein ANHYDRO_00952 [Anaerococcus hydrogenalis DSM 7454] gi|256545289|ref|ZP_05472653.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170] gi|325849213|ref|ZP_08170664.1| ferredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212676586|gb|EEB36193.1| hypothetical protein ANHYDRO_00952 [Anaerococcus hydrogenalis DSM 7454] gi|256398970|gb|EEU12583.1| conserved domain protein [Anaerococcus vaginalis ATCC 51170] gi|325480213|gb|EGC83280.1| ferredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 58 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + EN CI C C CPV +G+ I D CIDCG C CPV+AI P Sbjct: 1 MAYRIDENTCISCG--SCEGECPVQAIEQGDAAYEIDEDACIDCGSCAAVCPVEAISP 56 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I + CI CG CE ECPV AI+ Sbjct: 5 IDENTCISCGSCEGECPVQAIEQGD 29 >gi|209516646|ref|ZP_03265499.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. H160] gi|209502921|gb|EEA02924.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. H160] Length = 412 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIDAITHDDNNYVVKADVCNGCMACVPPCPTGAI 64 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDDN 40 >gi|91203437|emb|CAJ71090.1| similar to NAD(P) oxidoreductase, FAD-containing subunit [Candidatus Kuenenia stuttgartiensis] Length = 700 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV C+ C CV VCP D F GE I D C CG+C ECP AI+ T Sbjct: 491 AYVDEHLCVGC--ITCVRVCPFDVPEFRNGEITAYIGGD-CQSCGLCIVECPAKAIRFKT 547 Query: 60 EPGLELWLKINSEY 73 ++ + + Sbjct: 548 PLEDSGRERLKALF 561 >gi|148263283|ref|YP_001229989.1| electron transfer flavoprotein, alpha subunit [Geobacter uraniireducens Rf4] gi|146396783|gb|ABQ25416.1| electron transfer flavoprotein, alpha subunit [Geobacter uraniireducens Rf4] Length = 441 Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C C CPVD + I+ +CI C C CP AI+ P Sbjct: 19 IAGKCIACGAR-CQSACPVDAIEMNDAGEPIINESKCIGCVKCVKVCPAQAIEMFFTPEE 77 Query: 64 EL 65 + Sbjct: 78 QK 79 >gi|161870852|ref|YP_001600026.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis 053442] gi|161596405|gb|ABX74065.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis 053442] Length = 279 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ VCP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRVCPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRVCPADAI 94 Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|18977217|ref|NP_578574.1| 2-keto acid:ferredoxin oxidoreductase subunit alpha [Pyrococcus furiosus DSM 3638] gi|18892876|gb|AAL80969.1| 2-keto acid:ferredoxin oxidoreductase subunit alpha [Pyrococcus furiosus DSM 3638] Length = 627 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VV + C CK + CP + + + I P C CGVC CP DAIK +E Sbjct: 570 VVEDRCTGCKACILLTGCPALVYEPEKKKVRIDPLICTGCGVCNQLCPFDAIKFPSE 626 >gi|319638998|ref|ZP_07993756.1| ferredoxin [Neisseria mucosa C102] gi|317399902|gb|EFV80565.1| ferredoxin [Neisseria mucosa C102] Length = 282 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C T C+ CPVD + + DEC CG+C CPVD I D P + + Sbjct: 79 ACIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQPF 134 Query: 67 LKINSEYAT 75 L ++T Sbjct: 135 LPSARRFST 143 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 75 IDESACIGCTACIRACPVDAI 95 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV CPVDC Sbjct: 102 MHTVISDECTGCGL--CVTPCPVDCI 125 >gi|119494011|ref|ZP_01624569.1| 4Fe-4S ferredoxin, iron-sulfur binding [Lyngbya sp. PCC 8106] gi|119452261|gb|EAW33459.1| 4Fe-4S ferredoxin, iron-sulfur binding [Lyngbya sp. PCC 8106] Length = 75 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV CPV C ++G ++ I D CIDCG+C CPV Sbjct: 1 MPHTIVTDVCEGV--ADCVAACPVACIHDGPGKNAKGTDWYWIDFDTCIDCGICLTVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ +PGL+ Sbjct: 59 EGAILPEEQPGLQK 72 >gi|299135388|ref|ZP_07028578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298589796|gb|EFI50001.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 658 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + C C+++CP + +AI D C CG C CP A P L K+ Sbjct: 266 VGC--HRCLDLCPTGAITPNGDHVAIDADICAGCGQCATACPTGAAAYALPPADVLIHKL 323 Query: 70 NSEYAT 75 + A Sbjct: 324 RAMLAA 329 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C LC CV VCP + + L D C+ CG+CE CP I+ + Sbjct: 503 DGCTLCL--SCVSVCPTGALSDDPDRPMLRFAEDACVQCGLCEATCPEKVIELVPQIDFR 560 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKM-DGVKQKYE 101 + + P + + D V K E Sbjct: 561 AATALTRTIKEEEPALCVRCHKPFGVKSTIDRVAAKLE 598 >gi|299149444|ref|ZP_07042501.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_23] gi|298512631|gb|EFI36523.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_23] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|261339676|ref|ZP_05967534.1| dimethylsulfoxide reductase, chain B [Enterobacter cancerogenus ATCC 35316] gi|288318503|gb|EFC57441.1| dimethylsulfoxide reductase, chain B [Enterobacter cancerogenus ATCC 35316] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|261339233|ref|ZP_05967091.1| hypothetical protein ENTCAN_05467 [Enterobacter cancerogenus ATCC 35316] gi|288319088|gb|EFC58026.1| dimethylsulfoxide reductase, chain B [Enterobacter cancerogenus ATCC 35316] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|323526712|ref|YP_004228865.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1001] gi|323383714|gb|ADX55805.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Burkholderia sp. CCGE1001] Length = 414 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIDAITHDDNNYVVRADVCNGCMACVPPCPTGAI 64 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDDN 40 >gi|253571979|ref|ZP_04849384.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838576|gb|EES66662.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGVEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|212710441|ref|ZP_03318569.1| hypothetical protein PROVALCAL_01503 [Providencia alcalifaciens DSM 30120] gi|212686861|gb|EEB46389.1| hypothetical protein PROVALCAL_01503 [Providencia alcalifaciens DSM 30120] Length = 194 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 3 YVVTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C VCP ++F+ + +CI C C CP ++ Sbjct: 63 YTISTAVICRQCEDAPCANVCPNGAISRKDDFVYVDQSKCIGCKTCVIACPYGTMEVIIR 122 Query: 61 PGLELWLKIN 70 P + +N Sbjct: 123 PVAQQTTALN 132 >gi|167768087|ref|ZP_02440140.1| hypothetical protein CLOSS21_02632 [Clostridium sp. SS2/1] gi|167710416|gb|EDS20995.1| hypothetical protein CLOSS21_02632 [Clostridium sp. SS2/1] gi|291561083|emb|CBL39883.1| Pyruvate-formate lyase-activating enzyme [butyrate-producing bacterium SSC/2] Length = 300 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C C C VCP G++ I P +C C C CP A+ + E Sbjct: 54 EKCAHCG--TCTHVCPNQAISMGDDSYVGIDPSKCAGCLQCVKNCPAKALSYEGEAKD 109 >gi|307721543|ref|YP_003892683.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979636|gb|ADN09671.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 212 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C++ C +CPV + EN + I + CI C C CP AI D E Sbjct: 57 CNHCENAPCERICPVSALHYIENGIVNIDKERCIGCAGCVMACPYGAIYIDPE 109 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 24/72 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 E CI C CV CP I P D+C C C CPV Sbjct: 87 ERCIGCAG--CVMACPYGAI-------YIDPETQTADKCTYCAHRIASSMMPACVVACPV 137 Query: 53 DA-IKPDTEPGL 63 +A I D + Sbjct: 138 EANIFGDLDDPA 149 >gi|298387444|ref|ZP_06996996.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 1_1_14] gi|298259651|gb|EFI02523.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 1_1_14] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGVEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|255016559|ref|ZP_05288685.1| putative hydrogenase [Bacteroides sp. 2_1_7] gi|256842203|ref|ZP_05547707.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262384870|ref|ZP_06078002.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298377650|ref|ZP_06987601.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_19] gi|301308948|ref|ZP_07214893.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 20_3] gi|256736087|gb|EEU49417.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262293586|gb|EEY81522.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298265353|gb|EFI07015.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 3_1_19] gi|300832974|gb|EFK63599.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. 20_3] Length = 478 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I + CI CG C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAEIDHETCISCGKCHQSCPYHAIVY 169 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 E CI C C EVCPV + E + I +CI CG C CP Sbjct: 150 ETCISCGKCHQSCPYHAIVYIPIPCEEVCPVKAISKDEYGVEHIDESKCIYCGKCVNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|284920748|emb|CBG33811.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 042] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|256810830|ref|YP_003128199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256794030|gb|ACV24699.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 152 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + ++ + + D+CI CG+C CP AI+ D Sbjct: 47 CMHCDKNPCLYACPENAIERIDDKVVVIKDKCIGCGLCAIACPFGAIRID 96 >gi|257063349|ref|YP_003143021.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256791002|gb|ACV21672.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C CK+ CV+VCP + EN I D+CI C C CP + E G Sbjct: 63 SCQHCKNPACVDVCPTGASHRTENGTVQIDHDKCIGCQFCVMACPYGVRYLNEEEG 118 >gi|154505522|ref|ZP_02042260.1| hypothetical protein RUMGNA_03059 [Ruminococcus gnavus ATCC 29149] gi|153794180|gb|EDN76600.1| hypothetical protein RUMGNA_03059 [Ruminococcus gnavus ATCC 29149] Length = 633 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y+++ E C C + C CPV + I D+CI CG CE C AI + Sbjct: 577 YIISPERCKGC--SKCARNCPVGAISGRIKEPFVIDNDKCIKCGACESSCAFGAIHIEE 633 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 13/45 (28%), Gaps = 5/45 (11%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV I P+ C C C CPV AI Sbjct: 560 HVVDKKCVSHT-----CTALRRYIISPERCKGCSKCARNCPVGAI 599 >gi|145591154|ref|YP_001153156.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282922|gb|ABP50504.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 232 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 V+ C C+ C VCP Y+ + ++ D CI CG C CP + Sbjct: 64 FVSSLCYHCEDAPCQRVCPTGATYKTPEGVVLVNKDLCIGCGYCIIACPYGSRYRPEPHE 123 Query: 63 LEL 65 Sbjct: 124 WHE 126 >gi|320196609|gb|EFW71232.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli WV_060327] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAT 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|225076878|ref|ZP_03720077.1| hypothetical protein NEIFLAOT_01929 [Neisseria flavescens NRL30031/H210] gi|224951764|gb|EEG32973.1| hypothetical protein NEIFLAOT_01929 [Neisseria flavescens NRL30031/H210] Length = 283 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQPFL 136 Query: 68 KINSEYAT 75 ++T Sbjct: 137 PSARRFST 144 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 76 IDEAVCIGCTACIRACPVDAI 96 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV CPVDC Sbjct: 103 MHTVISDECTGCGL--CVTPCPVDCI 126 >gi|89897355|ref|YP_520842.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336803|dbj|BAE86398.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 228 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 YV T C C + CV+ CP Y+ + L +H P++CI C C CP + I +++ Sbjct: 53 YVPT-LCNHCDNAACVKACPTKAMYKDDKGLTLHNPNKCIGCKSCMQACPYEVINYNSKE 111 Query: 62 GLELWLK 68 +W Sbjct: 112 PHGIWRD 118 >gi|330999867|ref|ZP_08323568.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329573552|gb|EGG55154.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 222 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C++ C++VCPV Y G + I +CI C C CP A K + Sbjct: 64 SCMHCENPACMKVCPVKAVYFGPHGEVLIDQKKCIGCKGCLAACPYSAPKFSDPNKQSYF 123 Query: 67 LKI 69 + Sbjct: 124 GDL 126 >gi|323699753|ref|ZP_08111665.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323459685|gb|EGB15550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 242 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C CVE CP + G+ + + D CI CG C CP +A Sbjct: 56 ACMHCDKPSCVEACPTGATYKAGDGSVVVDHDRCIGCGGCVAACPYNA 103 >gi|309776266|ref|ZP_07671256.1| pyruvate formate-lyase-activating enzyme [Erysipelotrichaceae bacterium 3_1_53] gi|308915985|gb|EFP61735.1| pyruvate formate-lyase-activating enzyme [Erysipelotrichaceae bacterium 3_1_53] Length = 308 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +CI C CV +CP E + I P +CI C C CPV A+ + E Sbjct: 54 DCIQC--QSCVNICPKHAISLSEQRIQIDPRQCIGCMQCLSFCPVHALSNEGE 104 >gi|7546410|pdb|1DUR|A Chain A, Replacement For 1fdx 2(4fe4s) Ferredoxin From (Now) Peptostreptococcus Asaccharolyticus Length = 55 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV+ ++CI C C CPV+C EG AI D CIDCG C CPV A P+ Sbjct: 1 AYVINDSCIACG--ACKPECPVNCIQEGS-IYAIDADSCIDCGSCASVCPVGAPNPED 55 >gi|222823395|ref|YP_002574969.1| formate dehydrogenase, beta (iron-sulfur) subunit [Campylobacter lari RM2100] gi|222538617|gb|ACM63718.1| formate dehydrogenase, beta (iron-sulfur) subunit [Campylobacter lari RM2100] Length = 189 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLE 64 T C C C +VCPV CFY + + +H CI CG C CP A + + Sbjct: 53 TLACQHCTDAPCEQVCPVKCFYIRADGIVLHDKKTCIGCGYCLYACPFGAPQFPRDGAFG 112 Query: 65 LWLKIN 70 + +++ Sbjct: 113 IKGEMD 118 >gi|218700587|ref|YP_002408216.1| dimethyl sulfoxide reductase subunit B [Escherichia coli IAI39] gi|218370573|emb|CAR18380.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli IAI39] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|56750734|ref|YP_171435.1| ferredoxin-like protein [Synechococcus elongatus PCC 6301] gi|81299625|ref|YP_399833.1| ferredoxin-like protein [Synechococcus elongatus PCC 7942] gi|56685693|dbj|BAD78915.1| ferredoxin-like protein [Synechococcus elongatus PCC 6301] gi|81168506|gb|ABB56846.1| ferredoxin-like protein [Synechococcus elongatus PCC 7942] Length = 74 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPV 52 M + +VT C DCV+ CPV C EG + I CIDCG+C CPV Sbjct: 1 MAHTIVTNTCEGV--ADCVDACPVACIQEGPGRNQKGTTWYWIDFSTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAILPEERPELQQ 72 >gi|15800758|ref|NP_286772.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 EDL933] gi|15830234|ref|NP_309007.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. Sakai] gi|168752123|ref|ZP_02777145.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|168756986|ref|ZP_02781993.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|168762971|ref|ZP_02787978.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|168769888|ref|ZP_02794895.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|168776254|ref|ZP_02801261.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|168783805|ref|ZP_02808812.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|168787323|ref|ZP_02812330.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|168801423|ref|ZP_02826430.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|195939558|ref|ZP_03084940.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. EC4024] gi|208808514|ref|ZP_03250851.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208815388|ref|ZP_03256567.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208822781|ref|ZP_03263100.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209399354|ref|YP_002269568.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|217325565|ref|ZP_03441649.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|254792095|ref|YP_003076932.1| dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|261227400|ref|ZP_05941681.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. FRIK2000] gi|261256177|ref|ZP_05948710.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. FRIK966] gi|12514060|gb|AAG55382.1|AE005279_2 anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. EDL933] gi|13360439|dbj|BAB34403.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. Sakai] gi|187768357|gb|EDU32201.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4196] gi|188013963|gb|EDU52085.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4113] gi|188998922|gb|EDU67908.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4076] gi|189355906|gb|EDU74325.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4401] gi|189361185|gb|EDU79604.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4486] gi|189366789|gb|EDU85205.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4501] gi|189372640|gb|EDU91056.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC869] gi|189376436|gb|EDU94852.1| dimethylsulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC508] gi|208728315|gb|EDZ77916.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208732036|gb|EDZ80724.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208738266|gb|EDZ85949.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209160754|gb|ACI38187.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209774998|gb|ACI85811.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775000|gb|ACI85812.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775002|gb|ACI85813.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209775006|gb|ACI85815.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|217321786|gb|EEC30210.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli O157:H7 str. TW14588] gi|254591495|gb|ACT70856.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. TW14359] gi|320192618|gb|EFW67259.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320637765|gb|EFX07557.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. G5101] gi|320642889|gb|EFX12090.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H- str. 493-89] gi|320648346|gb|EFX17001.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H- str. H 2687] gi|320664277|gb|EFX31428.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O157:H7 str. LSU-61] gi|326338209|gb|EGD62038.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|326346186|gb|EGD69924.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|16128862|ref|NP_415415.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. MG1655] gi|30062382|ref|NP_836553.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 2457T] gi|74311453|ref|YP_309872.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella sonnei Ss046] gi|89107745|ref|AP_001525.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. W3110] gi|91209998|ref|YP_539984.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli UTI89] gi|110804895|ref|YP_688415.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 5 str. 8401] gi|117623079|ref|YP_851992.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli APEC O1] gi|157158279|ref|YP_001462093.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|157160418|ref|YP_001457736.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|170020703|ref|YP_001725657.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|170080553|ref|YP_001729873.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. DH10B] gi|170769322|ref|ZP_02903775.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|187732026|ref|YP_001880908.1| dimethylsulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|188494050|ref|ZP_03001320.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|191167581|ref|ZP_03029392.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|193064681|ref|ZP_03045760.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|193070738|ref|ZP_03051673.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194428398|ref|ZP_03060939.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194435161|ref|ZP_03067394.1| dimethylsulfoxide reductase, B subunit [Shigella dysenteriae 1012] gi|194438684|ref|ZP_03070771.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|209918144|ref|YP_002292228.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE11] gi|218553481|ref|YP_002386394.1| dimethyl sulfoxide reductase, anaerobic subunit B [Escherichia coli IAI1] gi|218557803|ref|YP_002390716.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli S88] gi|218688738|ref|YP_002396950.1| dimethyl sulfoxide reductase, anaerobic subunit B [Escherichia coli ED1a] gi|218694368|ref|YP_002402035.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli 55989] gi|218704324|ref|YP_002411843.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli UMN026] gi|237707115|ref|ZP_04537596.1| dimethylsulfoxide reductase [Escherichia sp. 3_2_53FAA] gi|238900153|ref|YP_002925949.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BW2952] gi|253774076|ref|YP_003036907.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161009|ref|YP_003044117.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli B str. REL606] gi|256020977|ref|ZP_05434842.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Shigella sp. D9] gi|256023404|ref|ZP_05437269.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia sp. 4_1_40B] gi|260843145|ref|YP_003220923.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O103:H2 str. 12009] gi|260854186|ref|YP_003228077.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O26:H11 str. 11368] gi|260867067|ref|YP_003233469.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O111:H- str. 11128] gi|291281898|ref|YP_003498716.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. CB9615] gi|293409273|ref|ZP_06652849.1| conserved hypothetical protein [Escherichia coli B354] gi|293414177|ref|ZP_06656826.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|293433192|ref|ZP_06661620.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli B088] gi|298379983|ref|ZP_06989588.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli FVEC1302] gi|300817003|ref|ZP_07097222.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 107-1] gi|300823634|ref|ZP_07103761.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 119-7] gi|300901678|ref|ZP_07119736.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 198-1] gi|300902948|ref|ZP_07120892.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 84-1] gi|300921071|ref|ZP_07137455.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 115-1] gi|300926533|ref|ZP_07142322.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 182-1] gi|300929588|ref|ZP_07145051.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 187-1] gi|300937611|ref|ZP_07152420.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 21-1] gi|300949745|ref|ZP_07163722.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 116-1] gi|300954718|ref|ZP_07167153.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 175-1] gi|301022880|ref|ZP_07186713.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 69-1] gi|301024414|ref|ZP_07188099.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|301302498|ref|ZP_07208629.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 124-1] gi|301325782|ref|ZP_07219230.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 78-1] gi|301646340|ref|ZP_07246228.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|306812649|ref|ZP_07446842.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli NC101] gi|307137523|ref|ZP_07496879.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli H736] gi|307311718|ref|ZP_07591358.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|309795296|ref|ZP_07689714.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 145-7] gi|312971022|ref|ZP_07785201.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|331641416|ref|ZP_08342551.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331662310|ref|ZP_08363233.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331667269|ref|ZP_08368134.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331672436|ref|ZP_08373226.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA280] gi|331676681|ref|ZP_08377377.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331682404|ref|ZP_08383023.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332282202|ref|ZP_08394615.1| dimethyl sulfoxide reductase [Shigella sp. D9] gi|2506394|sp|P18776|DMSB_ECOLI RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|1651422|dbj|BAA35627.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K12 substr. W3110] gi|1787122|gb|AAC73981.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. MG1655] gi|30040628|gb|AAP16359.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 2457T] gi|73854930|gb|AAZ87637.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella sonnei Ss046] gi|91071572|gb|ABE06453.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli UTI89] gi|110614443|gb|ABF03110.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 5 str. 8401] gi|115512203|gb|ABJ00278.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli APEC O1] gi|157066098|gb|ABV05353.1| dimethylsulfoxide reductase, B subunit [Escherichia coli HS] gi|157080309|gb|ABV20017.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E24377A] gi|169755631|gb|ACA78330.1| dimethylsulfoxide reductase, chain B [Escherichia coli ATCC 8739] gi|169888388|gb|ACB02095.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli str. K-12 substr. DH10B] gi|170121974|gb|EDS90905.1| dimethylsulfoxide reductase, B subunit [Escherichia albertii TW07627] gi|187429018|gb|ACD08292.1| dimethylsulfoxide reductase, B subunit [Shigella boydii CDC 3083-94] gi|188489249|gb|EDU64352.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli 53638] gi|190902342|gb|EDV62080.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B7A] gi|192927738|gb|EDV82353.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E22] gi|192955931|gb|EDV86399.1| dimethylsulfoxide reductase, B subunit [Escherichia coli E110019] gi|194413613|gb|EDX29894.1| dimethylsulfoxide reductase, B subunit [Escherichia coli B171] gi|194416599|gb|EDX32735.1| dimethylsulfoxide reductase, B subunit [Shigella dysenteriae 1012] gi|194422316|gb|EDX38316.1| dimethylsulfoxide reductase, B subunit [Escherichia coli 101-1] gi|209775004|gb|ACI85814.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli] gi|209911403|dbj|BAG76477.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE11] gi|218351100|emb|CAU96804.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli 55989] gi|218360249|emb|CAQ97799.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli IAI1] gi|218364572|emb|CAR02258.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli S88] gi|218426302|emb|CAR07127.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli ED1a] gi|218431421|emb|CAR12299.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli UMN026] gi|222032629|emb|CAP75368.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli LF82] gi|226898325|gb|EEH84584.1| dimethylsulfoxide reductase [Escherichia sp. 3_2_53FAA] gi|238860773|gb|ACR62771.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BW2952] gi|242376710|emb|CAQ31423.1| dimethyl sulfoxide reductase, chain B, subunit of dimethyl sulfoxide reductase [Escherichia coli BL21(DE3)] gi|253325120|gb|ACT29722.1| dimethylsulfoxide reductase, chain B [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972910|gb|ACT38581.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli B str. REL606] gi|253977124|gb|ACT42794.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli BL21(DE3)] gi|257752835|dbj|BAI24337.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O26:H11 str. 11368] gi|257758292|dbj|BAI29789.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O103:H2 str. 12009] gi|257763423|dbj|BAI34918.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O111:H- str. 11128] gi|260449959|gb|ACX40381.1| dimethylsulfoxide reductase, chain B [Escherichia coli DH1] gi|281178029|dbj|BAI54359.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli SE15] gi|281600223|gb|ADA73207.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri 2002017] gi|290761771|gb|ADD55732.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. CB9615] gi|291324011|gb|EFE63433.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli B088] gi|291434235|gb|EFF07208.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|291469741|gb|EFF12225.1| conserved hypothetical protein [Escherichia coli B354] gi|294491373|gb|ADE90129.1| anaerobic dimethyl sulfoxide reductase, B subunit [Escherichia coli IHE3034] gi|298279681|gb|EFI21189.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli FVEC1302] gi|299880386|gb|EFI88597.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 196-1] gi|300318329|gb|EFJ68113.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 175-1] gi|300354902|gb|EFJ70772.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 198-1] gi|300397342|gb|EFJ80880.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 69-1] gi|300405009|gb|EFJ88547.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 84-1] gi|300411922|gb|EFJ95232.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 115-1] gi|300417450|gb|EFK00761.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 182-1] gi|300450859|gb|EFK14479.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 116-1] gi|300457341|gb|EFK20834.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 21-1] gi|300462476|gb|EFK25969.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 187-1] gi|300523834|gb|EFK44903.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 119-7] gi|300530355|gb|EFK51417.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 107-1] gi|300842337|gb|EFK70097.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 124-1] gi|300847425|gb|EFK75185.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 78-1] gi|301075443|gb|EFK90249.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|305853412|gb|EFM53851.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli NC101] gi|306908273|gb|EFN38772.1| dimethylsulfoxide reductase, chain B [Escherichia coli W] gi|307627675|gb|ADN71979.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli UM146] gi|308120946|gb|EFO58208.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 145-7] gi|309701171|emb|CBJ00471.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli ETEC H10407] gi|310336783|gb|EFQ01950.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1827-70] gi|312945418|gb|ADR26245.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O83:H1 str. NRG 857C] gi|313650193|gb|EFS14605.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2a str. 2457T] gi|315060180|gb|ADT74507.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli W] gi|315135543|dbj|BAJ42702.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli DH1] gi|315257935|gb|EFU37903.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 85-1] gi|315287518|gb|EFU46929.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 110-3] gi|315296137|gb|EFU55446.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 16-3] gi|315619207|gb|EFU99786.1| dimethylsulfoxide reductase, chain B [Escherichia coli 3431] gi|320175336|gb|EFW50442.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella dysenteriae CDC 74-1112] gi|320202290|gb|EFW76861.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli EC4100B] gi|320654184|gb|EFX22252.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659808|gb|EFX27364.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O55:H7 str. USDA 5905] gi|323157219|gb|EFZ43342.1| dimethylsulfoxide reductase, chain B [Escherichia coli EPECa14] gi|323159520|gb|EFZ45500.1| dimethylsulfoxide reductase, chain B [Escherichia coli E128010] gi|323165356|gb|EFZ51143.1| dimethylsulfoxide reductase, chain B [Shigella sonnei 53G] gi|323175008|gb|EFZ60623.1| dimethylsulfoxide reductase, chain B [Escherichia coli LT-68] gi|323175483|gb|EFZ61078.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1180] gi|323185399|gb|EFZ70763.1| dimethylsulfoxide reductase, chain B [Escherichia coli 1357] gi|323379263|gb|ADX51531.1| dimethylsulfoxide reductase, chain B [Escherichia coli KO11] gi|323938001|gb|EGB34263.1| dimethylsulfoxide reductase [Escherichia coli E1520] gi|323942811|gb|EGB38976.1| dimethylsulfoxide reductase [Escherichia coli E482] gi|323947316|gb|EGB43324.1| dimethylsulfoxide reductase [Escherichia coli H120] gi|323953395|gb|EGB49261.1| dimethylsulfoxide reductase [Escherichia coli H252] gi|323958202|gb|EGB53911.1| dimethylsulfoxide reductase [Escherichia coli H263] gi|323962943|gb|EGB58516.1| dimethylsulfoxide reductase [Escherichia coli H489] gi|323967142|gb|EGB62566.1| dimethylsulfoxide reductase [Escherichia coli M863] gi|323973232|gb|EGB68424.1| dimethylsulfoxide reductase [Escherichia coli TA007] gi|323976718|gb|EGB71806.1| dimethylsulfoxide reductase [Escherichia coli TW10509] gi|324009810|gb|EGB79029.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 57-2] gi|324019014|gb|EGB88233.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 117-3] gi|324116108|gb|EGC10032.1| dimethylsulfoxide reductase [Escherichia coli E1167] gi|327253683|gb|EGE65312.1| dimethylsulfoxide reductase, chain B [Escherichia coli STEC_7v] gi|331038214|gb|EGI10434.1| dimethylsulfoxide reductase, chain B [Escherichia coli H736] gi|331060732|gb|EGI32696.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA143] gi|331065625|gb|EGI37518.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA271] gi|331070342|gb|EGI41707.1| dimethylsulfoxide reductase, chain B [Escherichia coli TA280] gi|331075370|gb|EGI46668.1| dimethylsulfoxide reductase, chain B [Escherichia coli H591] gi|331080035|gb|EGI51214.1| dimethylsulfoxide reductase, chain B [Escherichia coli H299] gi|332091030|gb|EGI96120.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 155-74] gi|332104554|gb|EGJ07900.1| dimethyl sulfoxide reductase [Shigella sp. D9] gi|332342337|gb|AEE55671.1| dimethylsulfoxide reductase DmsB [Escherichia coli UMNK88] gi|332759810|gb|EGJ90113.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 4343-70] gi|332760458|gb|EGJ90747.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2747-71] gi|332768073|gb|EGJ98259.1| dimethylsulfoxide reductase, chain B [Shigella flexneri 2930-71] gi|333006981|gb|EGK26476.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-218] gi|333021020|gb|EGK40278.1| dimethylsulfoxide reductase, chain B [Shigella flexneri K-304] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|188579717|ref|YP_001923162.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] gi|179343215|gb|ACB78627.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium populi BJ001] Length = 665 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + +AI P C CG C CP A P L ++ Sbjct: 270 TRCLDVCPTGAIASAGDSVAIDPYICAGCGSCAAVCPTGAANYALPPADALMRRL 324 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE+C LC CV CP + + LA C+ CG+C CP D I Sbjct: 507 TEDCTLCL--SCVGACPTHALTDSADRPLLAFEESLCVQCGLCAATCPEDVIDLTPRIDF 564 Query: 64 ELWLK 68 E W Sbjct: 565 EAWAA 569 >gi|160886568|ref|ZP_02067571.1| hypothetical protein BACOVA_04579 [Bacteroides ovatus ATCC 8483] gi|156108453|gb|EDO10198.1| hypothetical protein BACOVA_04579 [Bacteroides ovatus ATCC 8483] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|120009|sp|P00201|FER_MEGEL RecName: Full=Ferredoxin gi|229468|prf||732190A ferredoxin Length = 54 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+++ C+ C C CP EGE + D CIDCG CE CP AI + Sbjct: 2 HVISDECVKCG--ACASTCPTGAIEEGETKYVVT-DSCIDCGACEAVCPTGAISAE 54 >gi|310657519|ref|YP_003935240.1| thiamine pyrophosphate protein domain-containing protein [Clostridium sticklandii DSM 519] gi|308824297|emb|CBH20335.1| Thiamine pyrophosphate protein domain protein TPP-binding [Clostridium sticklandii] Length = 593 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T+ CI CK C+ CP F + +I PD C+ C VC CPV AI Sbjct: 538 VDTDKCIGCK--ACIRTGCPAISFDKDNKKSSISPDSCVGCEVCLQVCPVKAI 588 >gi|261367343|ref|ZP_05980226.1| Fe-hydrogenase large subunit family protein [Subdoligranulum variabile DSM 15176] gi|282570103|gb|EFB75638.1| Fe-hydrogenase large subunit family protein [Subdoligranulum variabile DSM 15176] Length = 507 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 20/57 (35%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C EVCP I C+ CG C CP AI P Sbjct: 119 VTAMCQGCLAHPCQEVCPKHAISFRNGKSHIDQSLCVKCGRCVNSCPYSAIVKTERP 175 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 19/71 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-----------------IHPDECIDCG 44 +++ C+ C CV CP + E A I D+C+ CG Sbjct: 147 SHIDQSLCVKCG--RCVNSCPYSAIVKTERPCAAACGMGAIHSDQYGRADIDYDKCVSCG 204 Query: 45 VCEPECPVDAI 55 +C CP AI Sbjct: 205 MCLVNCPFGAI 215 >gi|169824821|ref|YP_001692432.1| ferredoxin [Finegoldia magna ATCC 29328] gi|297587204|ref|ZP_06945849.1| ferredoxin [Finegoldia magna ATCC 53516] gi|302379640|ref|ZP_07268125.1| ferredoxin [Finegoldia magna ACS-171-V-Col3] gi|303234546|ref|ZP_07321183.1| ferredoxin [Finegoldia magna BVS033A4] gi|167831626|dbj|BAG08542.1| ferredoxin [Finegoldia magna ATCC 29328] gi|297575185|gb|EFH93904.1| ferredoxin [Finegoldia magna ATCC 53516] gi|302312547|gb|EFK94543.1| ferredoxin [Finegoldia magna ACS-171-V-Col3] gi|302494380|gb|EFL54149.1| ferredoxin [Finegoldia magna BVS033A4] Length = 56 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++++CI C C CPVDC EG + I D CIDCG C CPVDA D Sbjct: 1 MAYKISDDCIACGQ--CKPECPVDCISEG-DIYTIDQDACIDCGSCADVCPVDAPHQD 55 >gi|164688083|ref|ZP_02212111.1| hypothetical protein CLOBAR_01728 [Clostridium bartlettii DSM 16795] gi|164602496|gb|EDQ95961.1| hypothetical protein CLOBAR_01728 [Clostridium bartlettii DSM 16795] Length = 628 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 YV+T++CI C C + CP + E + I +C+ CG C +C AI + Sbjct: 574 YVITDDCIGCGL--CKKNCPAEAINGEKKQKHVIDTTKCLKCGACMEKCKKGAIIKE 628 >gi|160939851|ref|ZP_02087198.1| hypothetical protein CLOBOL_04742 [Clostridium bolteae ATCC BAA-613] gi|158437285|gb|EDP15050.1| hypothetical protein CLOBOL_04742 [Clostridium bolteae ATCC BAA-613] Length = 357 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V T+ CI C C C E +I +C+ CG C CPVDA+ + Sbjct: 179 PFVHTDKCIGCG--ACQRNCAHSAITVLERKASIDTSKCVGCGRCIGACPVDAVDSMCDE 236 Query: 62 GLELWLKINSEYAT 75 ++ +N + A Sbjct: 237 ANDI---LNRKIAE 247 >gi|255690239|ref|ZP_05413914.1| Fe-hydrogenase large subunit family protein [Bacteroides finegoldii DSM 17565] gi|260624258|gb|EEX47129.1| Fe-hydrogenase large subunit family protein [Bacteroides finegoldii DSM 17565] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCLNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|90577567|ref|ZP_01233378.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] gi|90440653|gb|EAS65833.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] Length = 210 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C +VCP + E + + ++ D CI C C CP A + Sbjct: 62 SYYLSISCNHCSDPACTKVCPSGAMHKREEDGLVVVNEDVCIGCKYCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|288929911|ref|ZP_06423753.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] gi|288328730|gb|EFC67319.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str. F0108] Length = 55 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV++++CI C C+ CPV+ EG + I D C +CG C CP +AI Sbjct: 1 MAYVISDDCIACG--TCLPECPVEAISEG-DIYKIDADACTECGTCASVCPSEAI 52 >gi|237723391|ref|ZP_04553872.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447913|gb|EEO53704.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|158520198|ref|YP_001528068.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509024|gb|ABW65991.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 355 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + C C+ CV+ C + ++ L ++PD CI CG+C CP +A+ + + Sbjct: 277 DACTGCE--TCVDRCQTNALAMDDDGLAVLNPDRCIGCGLCVITCPSEALSLQAKSPEQQ 334 Query: 66 W 66 + Sbjct: 335 Y 335 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 7/58 (12%) Query: 9 CILCKHTDCV------EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C V P + ++ + D C C C C +A+ D + Sbjct: 243 CNCCGDCCGVLQAINFHPKPAEAVS-TNHYAVLDRDACTGCETCVDRCQTNALAMDDD 299 >gi|82703818|ref|YP_413384.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosospira multiformis ATCC 25196] gi|82411883|gb|ABB75992.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosospira multiformis ATCC 25196] Length = 259 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CI C T C++VCPVD + + EC C +C CPVD I+ Sbjct: 84 QACIGC--TVCIQVCPVDAIVGAARQMHTVISGECTGCSLCLEPCPVDCIQMVLPKEHSP 141 Query: 66 WLKINSEYA 74 +I ++ A Sbjct: 142 CAEIGAQIA 150 Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C VC CPVDAI Sbjct: 81 IDEQACIGCTVCIQVCPVDAI 101 >gi|308049209|ref|YP_003912775.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307631399|gb|ADN75701.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 182 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 T +C+ C + C+ VCP F ++ L + + C CG+C CP DAI D G Sbjct: 58 THSCMHCGNPACLMVCPAGAFTTRDDGLVVLDRERCTSCGLCVSACPYDAIAVDPRDG 115 >gi|284048866|ref|YP_003399205.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] gi|283953087|gb|ADB47890.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] Length = 504 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y++T+ C C C+ CP + I D CI+CG C+ CP A+ P Sbjct: 105 YMITDVCRRCLTHRCMNGCPKKAISVYQGRAHIDYDMCIECGNCKRACPYGAVVEIARP 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCK--------------HTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVC 46 ++ + CI C C C V + G+N I + C++CG C Sbjct: 135 AHIDYDMCIECGNCKRACPYGAVVEIARPCENACKVHALHTGKNKKAEIDKNICVECGAC 194 Query: 47 EPECPVDAIKP 57 CP AI+ Sbjct: 195 RGACPFGAIEE 205 >gi|241759531|ref|ZP_04757634.1| ferredoxin, 4Fe-4S bacterial type [Neisseria flavescens SK114] gi|241320088|gb|EER56449.1| ferredoxin, 4Fe-4S bacterial type [Neisseria flavescens SK114] Length = 283 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + DEC CG+C CPVD I D P + +L Sbjct: 81 CIGC--TACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPCPVDCI--DMVPVSQSFL 136 Query: 68 KINSEYAT 75 ++T Sbjct: 137 PSARRFST 144 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 76 IDEAICIGCTACIRACPVDAI 96 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV CPVDC Sbjct: 103 MHTVISDECTGCGL--CVTPCPVDCI 126 >gi|153809516|ref|ZP_01962184.1| hypothetical protein BACCAC_03834 [Bacteroides caccae ATCC 43185] gi|149127824|gb|EDM19047.1| hypothetical protein BACCAC_03834 [Bacteroides caccae ATCC 43185] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I + CI CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHETCISCGICHKSCPYHAIVY 169 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 E CI C C E CPV + E+ + I +CI CG C CP Sbjct: 150 ETCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|51891249|ref|YP_073940.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] gi|51854938|dbj|BAD39096.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Symbiobacterium thermophilum IAM 14863] Length = 237 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 VT C+ C C VCP Y+ + I + CI C C CP +A D Sbjct: 53 FVTTQCLHCDDPPCAAVCPTGATYKTADGPVKIDDENCIGCQYCMTACPYEARTYDAAAD 112 >gi|24112270|ref|NP_706780.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 301] gi|33301071|sp|Q83RZ7|DMSB_SHIFL RecName: Full=Anaerobic dimethyl sulfoxide reductase chain B; AltName: Full=DMSO reductase iron-sulfur subunit gi|24051122|gb|AAN42487.1| anaerobic dimethyl sulfoxide reductase subunit B [Shigella flexneri 2a str. 301] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|260173332|ref|ZP_05759744.1| putative hydrogenase [Bacteroides sp. D2] gi|315921605|ref|ZP_07917845.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695480|gb|EFS32315.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|295106606|emb|CBL04149.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 215 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C C VCP ++ + L +CI CG C CP A D Sbjct: 67 AYHLSLACNHCGDPACTRVCPTGAMHKDDRGLVWPDERKCIGCGYCTMACPYHAPFID 124 >gi|293373213|ref|ZP_06619575.1| iron only hydrogenase large subunit, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292631861|gb|EFF50477.1| iron only hydrogenase large subunit, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 489 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|269928392|ref|YP_003320713.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787749|gb|ACZ39891.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 290 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ C C + C+E CP E + + + D C CG C P CP I D Sbjct: 102 SDVCKHCVNAGCMEACPTGAIIRTEFDTVVVQQDVCNGCGYCVPACPFGVIALDL 156 >gi|227825061|ref|ZP_03989893.1| hydrogenase large subunit [Acidaminococcus sp. D21] gi|226905560|gb|EEH91478.1| hydrogenase large subunit [Acidaminococcus sp. D21] Length = 501 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y++T+ C C C+ CP + I D C++CG C+ CP A+ + P Sbjct: 105 YMITDVCRRCLTHRCMNGCPKKAISVYQGRAHIDYDVCVECGNCKRACPYGAVVEISRP 163 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 19/73 (26%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-----------------GENFLAIHPDECIDCG 44 ++ + C+ C +C CP E + I + C++CG Sbjct: 135 AHIDYDVCVECG--NCKRACPYGAVVEISRPCENACKVHALHMGADKKAEIDKNVCVECG 192 Query: 45 VCEPECPVDAIKP 57 C CP AI+ Sbjct: 193 ACRGACPFGAIEE 205 >gi|77919203|ref|YP_357018.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77545286|gb|ABA88848.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Pelobacter carbinolicus DSM 2380] Length = 486 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 VV + C+ C T C +VCPV+C + I CI CG C +C DAI Sbjct: 433 VVDQKCVGC--TLCAKVCPVNCISGKPKEVHVIDQAACIKCGACLDKCKFDAI 483 >gi|303257325|ref|ZP_07343339.1| dimethylsulfoxide reductase, chain B [Burkholderiales bacterium 1_1_47] gi|302860816|gb|EFL83893.1| dimethylsulfoxide reductase, chain B [Burkholderiales bacterium 1_1_47] Length = 201 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y V+ C C CV+VCP + E+ L I +CI CG+C CP A D Sbjct: 61 YYVSLGCNHCSDPACVKVCPTKAHHKRAEDGLVVIDATKCIGCGLCAQACPYYAPVLDE 119 >gi|255067816|ref|ZP_05319671.1| ferredoxin [Neisseria sicca ATCC 29256] gi|255047907|gb|EET43371.1| ferredoxin [Neisseria sicca ATCC 29256] Length = 130 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 48 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 105 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 106 ILIDEEHPETH 116 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/32 (53%), Positives = 19/32 (59%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 G+ DECI+C VCEPECP DAI E Sbjct: 45 GKEMSLFITDECINCDVCEPECPNDAISQGEE 76 >gi|160934322|ref|ZP_02081709.1| hypothetical protein CLOLEP_03193 [Clostridium leptum DSM 753] gi|156866995|gb|EDO60367.1| hypothetical protein CLOLEP_03193 [Clostridium leptum DSM 753] Length = 368 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV+ E C+ C C + C D + I+ C CG C C DAIKP + Sbjct: 190 PYVIQEQCVGC--RVCAKSCAHDAISFTDKKANINHSLCAGCGRCIGVCHRDAIKPADDE 247 Query: 62 GLELWLKINSEYATQWPNITTKKE 85 ++ +N + A + K+ Sbjct: 248 SFDI---LNQKVAEYTKAVVDKRP 268 >gi|29347244|ref|NP_810747.1| putative hydrogenase [Bacteroides thetaiotaomicron VPI-5482] gi|29339143|gb|AAO76941.1| putative hydrogenase [Bacteroides thetaiotaomicron VPI-5482] Length = 482 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 107 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 143 DTCVSCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGVEHIDESKCIYCGKCMNACP 202 Query: 52 VDAIKP 57 AI Sbjct: 203 FGAIFE 208 >gi|317491443|ref|ZP_07949879.1| dimethylsulfoxide reductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920990|gb|EFV42313.1| dimethylsulfoxide reductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ ++ + CI C C CP A + + E Sbjct: 60 AYYLSISCNHCSDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNEE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|160943469|ref|ZP_02090702.1| hypothetical protein FAEPRAM212_00959 [Faecalibacterium prausnitzii M21/2] gi|158445148|gb|EDP22151.1| hypothetical protein FAEPRAM212_00959 [Faecalibacterium prausnitzii M21/2] gi|295103736|emb|CBL01280.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Faecalibacterium prausnitzii SL3/3] Length = 56 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV ++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCG--ACEGACPVGAITIENGAAVVNADSCIDCGACEGACPTGAIAAE 56 >gi|77919233|ref|YP_357048.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77919440|ref|YP_357255.1| NADP-reducing hydrogenase subunit C [Pelobacter carbinolicus DSM 2380] gi|77545316|gb|ABA88878.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] gi|77545523|gb|ABA89085.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] Length = 486 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 VV + C+ C T C +VCPV+C + I CI CG C +C DAI Sbjct: 433 VVDQKCVGC--TLCAKVCPVNCISGKPKEVHVIDQAACIKCGACLDKCKFDAI 483 >gi|170290379|ref|YP_001737195.1| heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] gi|170174459|gb|ACB07512.1| Heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] Length = 648 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V +E C C CVE CP E + P C+ CG+C+ CP AI+ Sbjct: 577 VNSELCTGCG--ACVEECPFSAIVLEEGKAKVLPLACMGCGICQGACPTGAIE 627 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 24/76 (31%), Gaps = 25/76 (32%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECI--- 41 YV + C+ C C E CPV+ E I + C+ Sbjct: 237 YVDQDKCVACG--ICAESCPVEVLNEWYARLGKRKAAYIPFPQSVPRAYVIDRENCLFFR 294 Query: 42 --DCGVCEPECPVDAI 55 C CE CP AI Sbjct: 295 DGSCRKCEEVCPAKAI 310 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ + C CG C ECP AI + Sbjct: 571 TGEKAKVNSELCTGCGACVEECPFSAIVLEE 601 >gi|188585282|ref|YP_001916827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349969|gb|ACB84239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 229 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPD 58 TY+ T C C H CVEVCP D Y+ E+ L +H ECI C CE CP + + Sbjct: 52 TYIPT-LCNHCDHAPCVEVCPTDPKAMYKTEHGLTLHDSKECIGCRQCEDACPYGVVYFN 110 Query: 59 TEPGLELW 66 +E E W Sbjct: 111 SEKAHEFW 118 >gi|224368236|ref|YP_002602399.1| IorA1 [Desulfobacterium autotrophicum HRM2] gi|223690952|gb|ACN14235.1| IorA1 [Desulfobacterium autotrophicum HRM2] Length = 616 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Query: 2 TYVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + VT+ C H DC++ CP EG + I P+ C+ C +C CP +AI P Sbjct: 560 AFTVTDRCKN--HRDCMDSIACPSFFIEEG--RVKIDPNTCVGCALCAQICPENAIVP 613 >gi|126459791|ref|YP_001056069.1| thiamine pyrophosphate binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249512|gb|ABO08603.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Pyrobaculum calidifontis JCM 11548] Length = 593 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V + C+ C C V + I P C+ CGVC CPV AIK + Sbjct: 526 FVDVDKCVSCG--ICYNVLKCSAISKASGGKAYIDPALCVGCGVCAEVCPVGAIKGE--G 581 Query: 62 GLELWLKI 69 WL++ Sbjct: 582 DRAKWLEV 589 >gi|26246921|ref|NP_752961.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli CFT073] gi|110641095|ref|YP_668825.1| anaerobic dimethyl sulfoxide reductase, subunit B [Escherichia coli 536] gi|191172116|ref|ZP_03033660.1| dimethylsulfoxide reductase, B subunit [Escherichia coli F11] gi|227884138|ref|ZP_04001943.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 83972] gi|300978541|ref|ZP_07174294.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 45-1] gi|300983194|ref|ZP_07176473.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 200-1] gi|301047846|ref|ZP_07194896.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 185-1] gi|26107321|gb|AAN79504.1|AE016758_108 Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli CFT073] gi|110342687|gb|ABG68924.1| anaerobic dimethyl sulfoxide reductase, subunit B [Escherichia coli 536] gi|190907643|gb|EDV67238.1| dimethylsulfoxide reductase, B subunit [Escherichia coli F11] gi|227838890|gb|EEJ49356.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli 83972] gi|300300274|gb|EFJ56659.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 185-1] gi|300306958|gb|EFJ61478.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 200-1] gi|300409620|gb|EFJ93158.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 45-1] gi|307552737|gb|ADN45512.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli ABU 83972] gi|315291254|gb|EFU50614.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 153-1] gi|324012985|gb|EGB82204.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 60-1] Length = 205 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAT 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|318604458|emb|CBY25956.1| anaerobic dimethyl sulfoxide reductase chain B [Yersinia enterocolitica subsp. palearctica Y11] Length = 204 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C C +VCP ++ ++ F+ + D CI C C CP A + D Sbjct: 59 AYYLSIACNHCSDPTCTKVCPTGAMHKRDDGFVVVSEDICIGCRYCHMACPYGAPQYDEA 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|331651914|ref|ZP_08352933.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|331050192|gb|EGI22250.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|170680702|ref|YP_001744275.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] gi|170518420|gb|ACB16598.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PG 62 G Sbjct: 120 KG 121 >gi|167629058|ref|YP_001679557.1| NADH dehydrogenase conserved domain protein, nuoe and nuof [Heliobacterium modesticaldum Ice1] gi|167591798|gb|ABZ83546.1| NADH dehydrogenase conserved domain protein, nuoe and nuof [Heliobacterium modesticaldum Ice1] Length = 906 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C C CV +CPV+ + I + CI CG C +CP I + E Sbjct: 853 EKCRRCGL--CVRLCPVEAISGEVRKRPFVIDKNRCIACGACAQKCPAKCIAREEE 906 Score = 40.1 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 21 CPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CP + I ++C CG+C CPV+AI + Sbjct: 834 CPAGVCAALRPKGKFRIDEEKCRRCGLCVRLCPVEAISGEVR 875 >gi|120022|sp|P00194|FER1_RHORU RecName: Full=Ferredoxin-1; AltName: Full=Ferredoxin I; Short=FdI gi|351273|prf||0905209A ferredoxin Length = 55 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + E CI C C CPV+ +G+ ++ D CIDCG C CPV A + Sbjct: 1 AYKIEETCISCG--ACAAECPVNAIEQGDTIFVVNADTCIDCGNCANVCPVGAPVAE 55 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDT 59 + CI CG C ECPV+AI+ Sbjct: 2 YKIEETCISCGACAAECPVNAIEQGD 27 >gi|328948664|ref|YP_004366001.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] gi|328448988|gb|AEB14704.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema succinifaciens DSM 2489] Length = 56 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y ++ +CI C C CP + E + I+ D C+ CG C CPV AI + Sbjct: 1 MAYKISSDCINCG--ACEGECPSEAISEVNDKRQINADNCVSCGSCASVCPVGAISEE 56 >gi|322835428|ref|YP_004215454.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] gi|321170629|gb|ADW76327.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] Length = 206 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C CK C + CP + G+ + ++ D+C+ CG C CP A + +T Sbjct: 71 AYTLSISCNHCKDPVCTKNCPTTAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQLNT 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|298480728|ref|ZP_06998924.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. D22] gi|298273162|gb|EFI14727.1| Fe-hydrogenase large subunit family protein [Bacteroides sp. D22] Length = 489 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|239626612|ref|ZP_04669643.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239516758|gb|EEQ56624.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 367 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV T+ C+ C C + C + +I +C+ CG C CPVDA+ Sbjct: 189 PYVHTDMCVGCG--SCQKNCAHSAITITDRKASIDVKKCVGCGRCIGACPVDAV 240 >gi|20807368|ref|NP_622539.1| ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] gi|254478276|ref|ZP_05091656.1| Putative Fe-S cluster family protein [Carboxydibrachium pacificum DSM 12653] gi|20515886|gb|AAM24143.1| Ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] gi|214035741|gb|EEB76435.1| Putative Fe-S cluster family protein [Carboxydibrachium pacificum DSM 12653] Length = 431 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYV--VT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 MTY VT + C C T+C++ CP + E I + CIDCG C CP A Sbjct: 1 MTYFHSVTLDKDRCRGC--TNCIKRCPTEAIRVREGKARIINERCIDCGECIRVCPYHA 57 >gi|320449774|ref|YP_004201870.1| NrfC protein [Thermus scotoductus SA-01] gi|320149943|gb|ADW21321.1| NrfC protein [Thermus scotoductus SA-01] Length = 195 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 E C+ C+ + CV VCP Y+ + L + P +CI CG C CP DA Sbjct: 56 EQCLHCETSPCVPVCPTGASYQTQEGLVLVDPKKCIACGACIAACPYDA 104 >gi|317488877|ref|ZP_07947407.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832690|ref|ZP_08165453.1| putative electron transport protein HydN [Eggerthella sp. HGA1] gi|316911951|gb|EFV33530.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485829|gb|EGC88290.1| putative electron transport protein HydN [Eggerthella sp. HGA1] Length = 207 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP C + + + +HPD+CI C C CP A++ TE Sbjct: 52 CHHCAEAPCVDACPTGCLFTDDEHVGVHPDKCIGCRNCVLACPYGAVEIVTE 103 >gi|206901010|ref|YP_002251422.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740113|gb|ACI19171.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] Length = 369 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 6/79 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C CV CP + PD CI CG C CP AIK + Sbjct: 195 CIGC--RRCVTHCPTGALEMVNKKSVLTRPDLCIGCGECAVVCPTSAIKILWNESA---I 249 Query: 68 KINSEYATQWPNITTKKES 86 + + A I +KE Sbjct: 250 GLQEKMAEFTYGILKQKEP 268 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 12/21 (57%) Query: 36 HPDECIDCGVCEPECPVDAIK 56 +P+ CI C C CP A++ Sbjct: 191 NPNLCIGCRRCVTHCPTGALE 211 >gi|303258350|ref|ZP_07344353.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302858796|gb|EFL81884.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 213 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C++ C++VCPV Y G + I +CI C C CP A K + Sbjct: 55 SCMHCENPACMKVCPVKAVYFGPHGEVLIDQKKCIGCKGCLAACPYSAPKFSDPNKQSYF 114 Query: 67 LKI 69 + Sbjct: 115 GDL 117 >gi|90410731|ref|ZP_01218746.1| hydrogenase 4 Fe-S subunit [Photobacterium profundum 3TCK] gi|90328362|gb|EAS44660.1| hydrogenase 4 Fe-S subunit [Photobacterium profundum 3TCK] Length = 204 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C +VCPV + + + ++ CI C +C CP AI D Sbjct: 51 CRHCEDAPCAKVCPVQAITKEGDRVLLNETLCIGCTLCAVACPFGAIAFD 100 >gi|46203868|ref|ZP_00050860.2| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 153 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 V+ C+ C C VCPV+CFY + + +H D CI G C CP A Sbjct: 51 VSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDICIGFGYCFYACPFGA 101 >gi|126698471|ref|YP_001087368.1| iron-dependent hydrogenase [Clostridium difficile 630] gi|255100006|ref|ZP_05328983.1| iron-dependent hydrogenase [Clostridium difficile QCD-63q42] gi|255305893|ref|ZP_05350065.1| iron-dependent hydrogenase [Clostridium difficile ATCC 43255] gi|115249908|emb|CAJ67727.1| putative iron-dependent hydrogenase [Clostridium difficile] Length = 498 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C E C I+ D C CG+C+ C DAI P Sbjct: 107 FTVTELCRGCLAHRCKEACKFGAISYINGRAYINHDLCKACGMCKSSCQYDAISEVVRP 165 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 18/103 (17%) Query: 2 TYVVTENCILCK--------------HTDCVEVCPVDC--FYEGENFLAIHPDECIDCGV 45 Y+ + C C C VCP F IH D CI+CG Sbjct: 137 AYINHDLCKACGMCKSSCQYDAISEVVRPCKSVCPTGALDFNRNTMKAMIHEDNCINCGA 196 Query: 46 CEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P + K + YA P IT + +S Sbjct: 197 CMSACPFGAISDKSLIAPVAKKLAKKENMYAIVAPAITGQIDS 239 >gi|254974516|ref|ZP_05270988.1| iron-dependent hydrogenase [Clostridium difficile QCD-66c26] gi|255313641|ref|ZP_05355224.1| iron-dependent hydrogenase [Clostridium difficile QCD-76w55] gi|255516325|ref|ZP_05384001.1| iron-dependent hydrogenase [Clostridium difficile QCD-97b34] gi|255649424|ref|ZP_05396326.1| iron-dependent hydrogenase [Clostridium difficile QCD-37x79] gi|260682592|ref|YP_003213877.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260686192|ref|YP_003217325.1| iron-dependent hydrogenase [Clostridium difficile R20291] gi|306519505|ref|ZP_07405852.1| iron-dependent hydrogenase [Clostridium difficile QCD-32g58] gi|260208755|emb|CBA61611.1| iron-dependent hydrogenase [Clostridium difficile CD196] gi|260212208|emb|CBE02900.1| iron-dependent hydrogenase [Clostridium difficile R20291] Length = 498 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C E C I+ D C CG+C+ C DAI P Sbjct: 107 FTVTELCRGCLAHRCKEACKFGAISYINGRAYINHDLCKACGMCKSSCQYDAISEVVRP 165 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 18/103 (17%) Query: 2 TYVVTENCILCK--------------HTDCVEVCPVDC--FYEGENFLAIHPDECIDCGV 45 Y+ + C C C VCP F IH D CI+CG Sbjct: 137 AYINHDLCKACGMCKSSCQYDAISEVVRPCKSVCPTGALDFNRNTMKAMIHEDNCINCGA 196 Query: 46 CEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P + K + YA P IT + +S Sbjct: 197 CISACPFGAISDKSLIAPVAKKLAKKENMYAIVAPAITGQIDS 239 >gi|56696676|ref|YP_167037.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56678413|gb|AAV95079.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 649 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C ++C+++CP + +AI P C CG C CP AI + Sbjct: 276 RGC--SNCLDICPTGAITSAGDHVAIDPMVCAGCGACAALCPSTAITYEAP 324 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV +CP + + L D C+ CG+C CP AI Sbjct: 496 VNTDACTLCL--SCVSLCPSGALIDNPDLPQLNFQEDACLQCGICRTICPEQAI 547 >gi|269121613|ref|YP_003309790.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] gi|268615491|gb|ACZ09859.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] Length = 57 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + E CI C C VCPV+ E + AI CIDCG CE CPV+AI + Sbjct: 1 MAYSINKETCIACG--ACEGVCPVEAIAEADGKYAIDGATCIDCGACEGVCPVEAISGE 57 >gi|89896497|ref|YP_519984.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89335945|dbj|BAE85540.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 187 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP ++ +N L ++ D CI C C CP DA + DTE Sbjct: 67 CNHCADPACVKNCPTGAMHKDDNGLVSVNQDVCIGCKYCVWTCPYDAPEFDTE 119 >gi|317490354|ref|ZP_07948838.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316910489|gb|EFV32114.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 193 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 V C+ C+ CV+ CP ++ + I ++CI CG+C CP A Sbjct: 31 VPNACVQCEKPACVDACPTGASVRRDDGITVIDYEKCIACGLCLAACPYGA 81 >gi|283833194|ref|ZP_06352935.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291070827|gb|EFE08936.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|260913682|ref|ZP_05920158.1| hydrogenase-4 component A [Pasteurella dagmatis ATCC 43325] gi|260632221|gb|EEX50396.1| hydrogenase-4 component A [Pasteurella dagmatis ATCC 43325] Length = 200 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C C VCPV+ + + + ++ CI C +C CP AI P Sbjct: 51 CHHCDDAPCATVCPVNAIKQVDRTIQLNESLCIGCKLCAIACPFGAITP 99 >gi|157145832|ref|YP_001453151.1| hypothetical protein CKO_01583 [Citrobacter koseri ATCC BAA-895] gi|157083037|gb|ABV12715.1| hypothetical protein CKO_01583 [Citrobacter koseri ATCC BAA-895] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|89072806|ref|ZP_01159363.1| anaerobic dimethyl sulfoxide reductase, subunit B [Photobacterium sp. SKA34] gi|89051328|gb|EAR56783.1| anaerobic dimethyl sulfoxide reductase, subunit B [Photobacterium sp. SKA34] Length = 210 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C +VCP + E + + ++ D CI C C CP A + Sbjct: 62 SYYLSISCNHCSDPACTKVCPSGAMHKREEDGLVVVNEDVCIGCKYCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|215486024|ref|YP_002328455.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O127:H6 str. E2348/69] gi|312969037|ref|ZP_07783244.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] gi|215264096|emb|CAS08439.1| dimethyl sulfoxide reductase, anaerobic, subunit B [Escherichia coli O127:H6 str. E2348/69] gi|312286439|gb|EFR14352.1| dimethylsulfoxide reductase, chain B [Escherichia coli 2362-75] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQFNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|152991176|ref|YP_001356898.1| molybdopterin oxidoreductase, iron sulfur subunit [Nitratiruptor sp. SB155-2] gi|151423037|dbj|BAF70541.1| molybdopterin oxidoreductase, iron sulfur subunit [Nitratiruptor sp. SB155-2] Length = 519 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +C C C++ CP + + + EN + IH DE CI C C CP D E Sbjct: 87 SCNHCIDPACLKGCPTNSYIKIENGIVIHDDEACIGCQYCTWNCPYDVPVFHEE 140 >gi|148263632|ref|YP_001230338.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146397132|gb|ABQ25765.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 431 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 11/64 (17%) Query: 7 ENCILCKHTDCVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C CV CPV D I + C+ CGVC CPV AI+ Sbjct: 290 DRCNGCG--RCVAACPVAVAELITANDPLNPARKKARIDRENCLGCGVCVRSCPVAAIRL 347 Query: 58 DTEP 61 ++ P Sbjct: 348 ESRP 351 >gi|317491979|ref|ZP_07950412.1| glutamate synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920004|gb|EFV41330.1| glutamate synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 687 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C VCP + ++ + + ++CI C C CP A++ T P Sbjct: 56 CRHCEDAPCANVCPNHAIEKRDDSIQVIQEKCIGCKTCVVACPFGAMEVITHPA 109 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 17/68 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--------YEG-ENFLAIHPDECIDCG------VCEP 48 V+ E CI CK CV CP E + + + +C C C Sbjct: 82 VIQEKCIGCK--TCVVACPFGAMEVITHPAPSETQPDGVFANAHKCDLCAGVADEPSCVA 139 Query: 49 ECPVDAIK 56 CP +A+K Sbjct: 140 SCPSNALK 147 >gi|281357693|ref|ZP_06244180.1| nitroreductase [Victivallis vadensis ATCC BAA-548] gi|281315950|gb|EFA99976.1| nitroreductase [Victivallis vadensis ATCC BAA-548] Length = 269 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +E CI C C++ CP GE + D+CI+CG C CP +AI Sbjct: 10 SEACIRCGF--CIDDCPTCVLEMGEAGPQVREDQCIECGHCVSVCPTEAI 57 >gi|237713804|ref|ZP_04544285.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409289|ref|ZP_06085832.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644700|ref|ZP_06722449.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294805939|ref|ZP_06764806.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229446251|gb|EEO52042.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352741|gb|EEZ01838.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639963|gb|EFF58232.1| 4Fe-4S binding domain protein [Bacteroides ovatus SD CC 2a] gi|294446821|gb|EFG15421.1| 4Fe-4S binding domain protein [Bacteroides xylanisolvens SD CC 1b] gi|295085089|emb|CBK66612.1| Iron only hydrogenase large subunit, C-terminal domain [Bacteroides xylanisolvens XB1A] Length = 489 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP D +N I D C+ CG+C CP AI Sbjct: 114 YEITNLCRGCVARSCYMNCPKDAIRFKKNGQAMIDHDTCVSCGICHKSCPYHAIVY 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C+ C C E CPV + E+ + I +CI CG C CP Sbjct: 150 DTCVSCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEHGIEHIDESKCIYCGKCMNACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|188025593|ref|ZP_02959171.2| hypothetical protein PROSTU_00970 [Providencia stuartii ATCC 25827] gi|188022949|gb|EDU60989.1| hypothetical protein PROSTU_00970 [Providencia stuartii ATCC 25827] Length = 208 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C +VCP ++ E+ F+ + + CI C C CP A + D Sbjct: 63 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEEVCIGCRYCSMACPYGAPQFDE 121 >gi|313681768|ref|YP_004059506.1| 4fe-4S ferredoxin, iron-sulfur binding protein [Sulfuricurvum kujiense DSM 16994] gi|313154628|gb|ADR33306.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Sulfuricurvum kujiense DSM 16994] Length = 211 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C + C +CPV + EN + I + CI C C CP AI D Sbjct: 57 CNHCANAPCERICPVSALHYIENGIVNIDKERCIGCAGCVMACPYGAIYID 107 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 24/72 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 E CI C CV CP I P D+C C C CPV Sbjct: 87 ERCIGCAG--CVMACPYGAI-------YIDPQTQTADKCTYCAHRVASAMMPSCVVACPV 137 Query: 53 DA-IKPDTEPGL 63 +A I D + + Sbjct: 138 EANIFGDLDDPM 149 >gi|302342304|ref|YP_003806833.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638917|gb|ADK84239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 352 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C++C C + C +D F G++ + ++ D CI CG+C CP +A+K P Sbjct: 274 AEACVMCGL--CEDRCQMDVFSPGDDAMILNMDRCIGCGLCVTTCPSEALKLVRRPDD 329 >gi|158522308|ref|YP_001530178.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511134|gb|ABW68101.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 378 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V T+ CI C CV C EGE I+ ++C+ CG C CP +++ Sbjct: 197 VKTKTCIGCGD--CVAHCAHGAIRLVKEGEKKALINEEKCVGCGECIVVCPTGSVQIQWN 254 Query: 61 PGLELWLKINSEY 73 +L+ EY Sbjct: 255 QAGPAFLEKMVEY 267 >gi|328951909|ref|YP_004369243.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452233|gb|AEB08062.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 181 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 22/48 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ CV VCP Y E + A+ CI C +C CP AI Sbjct: 64 CRQCQDAPCVRVCPTGATYRTETYTAVDQARCIGCRLCMMVCPFGAIH 111 >gi|296533711|ref|ZP_06896262.1| 4Fe-4S ferredoxin [Roseomonas cervicalis ATCC 49957] gi|296265958|gb|EFH12032.1| 4Fe-4S ferredoxin [Roseomonas cervicalis ATCC 49957] Length = 666 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C+++CP G+ + I + C CG C CP A + D P Sbjct: 285 TRCLDLCPTGAITPGKESVQISAEICAGCGACAAICPTGAAQYDLPPTD 333 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC C VCP F + L+ D C+ CG+C CP I Sbjct: 513 VAVEGCTLCL--ACTMVCPTGAFAANPDRPELSFLEDACVQCGLCATTCPEKVI 564 >gi|227486762|ref|ZP_03917078.1| ferredoxin [Anaerococcus lactolyticus ATCC 51172] gi|227235232|gb|EEI85247.1| ferredoxin [Anaerococcus lactolyticus ATCC 51172] Length = 57 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y + EN CI C C CPV +G+ I + CIDCG C CPV+AI + Sbjct: 1 MAYKIDENTCISCG--SCEGECPVGAISQGDAAYEIDANACIDCGSCSAVCPVEAIDQE 57 >gi|212709896|ref|ZP_03318024.1| hypothetical protein PROVALCAL_00945 [Providencia alcalifaciens DSM 30120] gi|212687707|gb|EEB47235.1| hypothetical protein PROVALCAL_00945 [Providencia alcalifaciens DSM 30120] Length = 252 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV ++ E+ + I + C+ C C CP DA Sbjct: 107 CNHCDNPPCVPVCPVQATFQREDGIVVIDNERCVGCAYCVQACPYDA 153 >gi|254430471|ref|ZP_05044174.1| 4Fe-4S binding domain protein [Cyanobium sp. PCC 7001] gi|197624924|gb|EDY37483.1| 4Fe-4S binding domain protein [Cyanobium sp. PCC 7001] Length = 74 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPV 52 M + +VT C DCV+ CPV C + G+ F I D CIDCG+C CPV Sbjct: 1 MAHTIVTNVCEGV--ADCVDACPVACIHPGQGANSKGTGFYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ +P L+ Sbjct: 59 EGAILPEEKPELQK 72 >gi|318041465|ref|ZP_07973421.1| ferredoxin [Synechococcus sp. CB0101] Length = 74 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G F I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGV--ADCVDACPVACINPGSGANAKGTGFYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI P+ +P L+ Sbjct: 59 EGAIVPEEKPDLQ 71 >gi|317471699|ref|ZP_07931040.1| respiratory-chain NADH dehydrogenase [Anaerostipes sp. 3_2_56FAA] gi|316900803|gb|EFV22776.1| respiratory-chain NADH dehydrogenase [Anaerostipes sp. 3_2_56FAA] Length = 629 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++++ E C C + C CP D + I D+CI CG CE C AI + Sbjct: 573 FIISPERCKGC--SKCARNCPADAISGRIKEPYVIDNDKCIKCGACESACAFGAIHIE 628 Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 11/25 (44%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I P+ C C C CP DAI Sbjct: 571 RRFIISPERCKGCSKCARNCPADAI 595 >gi|323190717|gb|EFZ75986.1| dimethylsulfoxide reductase, chain B [Escherichia coli RN587/1] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQFNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|167746890|ref|ZP_02419017.1| hypothetical protein ANACAC_01602 [Anaerostipes caccae DSM 14662] gi|167653850|gb|EDR97979.1| hypothetical protein ANACAC_01602 [Anaerostipes caccae DSM 14662] Length = 629 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++++ E C C + C CP D + I D+CI CG CE C AI + Sbjct: 573 FIISPERCKGC--SKCARNCPADAISGRIKEPYVIDNDKCIKCGACESACAFGAIHIE 628 Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 11/25 (44%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I P+ C C C CP DAI Sbjct: 571 RRFIISPERCKGCSKCARNCPADAI 595 >gi|219667648|ref|YP_002458083.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537908|gb|ACL19647.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 187 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV+ CP ++ +N L ++ D CI C C CP DA + DTE Sbjct: 67 CNHCADPACVKNCPTGAMHKDDNGLVSVNQDVCIGCKYCVWTCPYDAPEFDTE 119 >gi|297516480|ref|ZP_06934866.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli OP50] Length = 161 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 16 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 75 Query: 61 PGL 63 G Sbjct: 76 KGH 78 >gi|150006371|ref|YP_001301115.1| ferredoxin [Bacteroides vulgatus ATCC 8482] gi|254881723|ref|ZP_05254433.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|294776232|ref|ZP_06741717.1| ferredoxin [Bacteroides vulgatus PC510] gi|319643688|ref|ZP_07998305.1| electron transport complex protein RnfB [Bacteroides sp. 3_1_40A] gi|149934795|gb|ABR41493.1| electron transport complex protein RnfB [Bacteroides vulgatus ATCC 8482] gi|254834516|gb|EET14825.1| ferredoxin [Bacteroides sp. 4_3_47FAA] gi|294449915|gb|EFG18430.1| ferredoxin [Bacteroides vulgatus PC510] gi|317384718|gb|EFV65680.1| electron transport complex protein RnfB [Bacteroides sp. 3_1_40A] Length = 317 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCP + N I P +C C CE ECP AI+ P + + Sbjct: 223 SCIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 68 KINSEYATQWPN--ITTKKESLPSAAKMDGVKQKYE 101 ++ + A P + K P A + K E Sbjct: 281 EVPAGEAAAKPAVKVEASKVETPKAEAVKAEAPKTE 316 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVE C D + + ++C CG C CP I+ Sbjct: 145 CLGCGD--CVEACQFDAIHMNPETGLPEVDEEKCTACGACSKACPRKIIE 192 >gi|78776698|ref|YP_393013.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] gi|78497238|gb|ABB43778.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] Length = 212 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C++ C +CPV + EN + I + CI C C CP AI D Sbjct: 57 CNHCENAPCERICPVSALHYLENGIVNIDKERCIGCSGCVMACPYGAIYID 107 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 24/71 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 E CI C CV CP I P D+C C C CPV Sbjct: 87 ERCIGCSG--CVMACPYGAI-------YIDPQTQTADKCTYCAHRVASSMMPACVVACPV 137 Query: 53 DA-IKPDTEPG 62 A I D E Sbjct: 138 QANIFGDLEDP 148 >gi|15668438|ref|NP_247236.1| carbon monoxide dehydrogenase iron sulfur subunit CooF1 [Methanocaldococcus jannaschii DSM 2661] gi|2494449|sp|Q57712|Y264_METJA RecName: Full=Uncharacterized protein MJ0264 gi|1592278|gb|AAB98251.1| carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF1) [Methanocaldococcus jannaschii DSM 2661] Length = 153 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + N + + D+C+ CG+C CP AI+ D Sbjct: 49 CMHCDRNPCLYACPENAIERINNKVVVIKDKCVGCGLCALACPFGAIRID 98 >gi|330999837|ref|ZP_08323541.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] gi|329573608|gb|EGG55201.1| dimethylsulfoxide reductase, chain B [Parasutterella excrementihominis YIT 11859] Length = 201 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y V+ C C CV+VCP + E+ L I +CI CG+C CP A D Sbjct: 61 YYVSLGCNHCSGPACVKVCPTKAHHKRAEDGLVVIDATKCIGCGLCAQACPYHAPVLDE 119 >gi|309784012|ref|ZP_07678656.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] gi|308928155|gb|EFP73618.1| dimethylsulfoxide reductase, chain B [Shigella dysenteriae 1617] Length = 152 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 31 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 90 Query: 61 PGL 63 G Sbjct: 91 KGH 93 >gi|238795930|ref|ZP_04639442.1| hypothetical protein ymoll0001_23270 [Yersinia mollaretii ATCC 43969] gi|238720135|gb|EEQ11939.1| hypothetical protein ymoll0001_23270 [Yersinia mollaretii ATCC 43969] Length = 533 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPV 52 +C C H CV+VCP Y + I PD C+ C C CP Sbjct: 80 SCQHCDHAPCVDVCPTGASYRDKATGIIDVNPDLCVGCQYCIAACPY 126 >gi|182417446|ref|ZP_02948773.1| nitroreductase family protein fused to ferredoxin domain [Clostridium butyricum 5521] gi|237665843|ref|ZP_04525831.1| 4Fe-4S binding domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378615|gb|EDT76142.1| nitroreductase family protein fused to ferredoxin domain [Clostridium butyricum 5521] gi|237658790|gb|EEP56342.1| nitroreductase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 278 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V + CI C + CV+ CPV +N I+ + C+ CG C CPV+A+ D Sbjct: 1 MFKVNKDKCIGC--SQCVKDCPVRVISLIDNKAEINNNNCMKCGHCIAICPVNAVSTDD 57 >gi|146311076|ref|YP_001176150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Enterobacter sp. 638] gi|145317952|gb|ABP60099.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Enterobacter sp. 638] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ ++ F+ + D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|91975987|ref|YP_568646.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] gi|91682443|gb|ABE38745.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Rhodopseudomonas palustris BisB5] Length = 217 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 C+ C + CVEVCP E+ L I D CI C C CP DA + +P Sbjct: 58 ACMHCANPPCVEVCPTTATRRREDGLVTIDYDICIGCANCIMACPYDARSIEHQP 112 >gi|323669543|gb|ABI30020.2| CarE [Acetobacterium woodii] Length = 396 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E CI C + C + CP D EN +A+ D C +CG C CP +AI + Sbjct: 5 VIEEKCIGC--SKCQKSCPFDAITI-ENKIAVIGDACTNCGTCIDVCPTEAILQE 56 >gi|189467136|ref|ZP_03015921.1| hypothetical protein BACINT_03520 [Bacteroides intestinalis DSM 17393] gi|189435400|gb|EDV04385.1| hypothetical protein BACINT_03520 [Bacteroides intestinalis DSM 17393] Length = 486 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I DECI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDECISCGICHKSCPYHAIVY 171 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + + + I +CI CG C CP Sbjct: 152 DECISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDKKGIEHIDESKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|21226158|ref|NP_632080.1| heterodisulfate reductase subunit A [Methanosarcina mazei Go1] gi|41017211|sp|Q8Q0T0|HDRA_METMA RecName: Full=CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit A gi|20904385|gb|AAM29752.1| Heterodisulfate reductase, subunit A [Methanosarcina mazei Go1] Length = 793 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V + CI C CVEVC + + C CG C CPV AI+ Sbjct: 573 AHVDPDKCIGC--RTCVEVCKFGKISIVDKKAVVDEVSCYGCGDCSAACPVGAIQ 625 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 19/84 (22%) Query: 3 YVVTENCILCKHTDCVEVCPVD-------------CFYE-----GENFLAIHPDECIDCG 44 +V+ + C C C EVCPV+ Y + I PD C+ CG Sbjct: 237 FVLEDKCKGCVDL-CSEVCPVEIENPMNYGIGKSRAIYMPIPQSVPQVVLIDPDHCVGCG 295 Query: 45 VCEPECPVDAIKPDTEPGLELWLK 68 +C+ CP +A+ + +P + Sbjct: 296 LCQLACPAEAVDYEQKPEEIEFEA 319 >gi|332295312|ref|YP_004437235.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332178415|gb|AEE14104.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 573 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 +V+ E C CK C CP + +I+P C CG C P+CP DA++ Sbjct: 496 AHVIEEKCTGCKL--CENSCPYEAISFVNRNDKVIASINPAICKGCGGCVPDCPEDALE 552 >gi|224535649|ref|ZP_03676188.1| hypothetical protein BACCELL_00513 [Bacteroides cellulosilyticus DSM 14838] gi|224522722|gb|EEF91827.1| hypothetical protein BACCELL_00513 [Bacteroides cellulosilyticus DSM 14838] Length = 486 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I DECI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDECISCGICHKSCPYHAIVY 171 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + + + I +CI CG C CP Sbjct: 152 DECISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDKKGIEHIDESKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|212634958|ref|YP_002311483.1| Fe-S-cluster-containing hydrogenase components 1 [Shewanella piezotolerans WP3] gi|212556442|gb|ACJ28896.1| Fe-S-cluster-containing hydrogenase components 1 [Shewanella piezotolerans WP3] Length = 231 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 V C C + CV+VCP + Y E + + I DECI C +C CP A Sbjct: 84 VPNQCNQCDNPPCVDVCPAEATYKREEDGIVVIDHDECIHCQLCVDACPYGA 135 >gi|197287384|ref|YP_002153256.1| electron transport protein [Proteus mirabilis HI4320] gi|194684871|emb|CAR47013.1| electron transport protein [Proteus mirabilis HI4320] Length = 185 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +++ + D+CI C C CP ++ + P + Sbjct: 62 CHQCEDAPCANVCPNGAIIHNKDYYYVDQDKCIGCKTCVLACPYGTMEVVSRPVMRKLTA 121 Query: 69 IN 70 +N Sbjct: 122 LN 123 >gi|114567339|ref|YP_754493.1| formate dehydrogenase subunit beta [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338274|gb|ABI69122.1| formate dehydrogenase beta subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 270 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 C C C++ C + Y+ E I D+CI CG C CP K D Sbjct: 74 CFHCGDPACMKACSSNAIYKTETGYTLIDKDKCIGCGYCAANCPWGVPKIDE 125 >gi|326391446|ref|ZP_08212982.1| NADH dehydrogenase (quinone) [Thermoanaerobacter ethanolicus JW 200] gi|325992525|gb|EGD50981.1| NADH dehydrogenase (quinone) [Thermoanaerobacter ethanolicus JW 200] Length = 596 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 Y+ + C C C + CPV+ I D+CI CG C +CP AI Sbjct: 542 YIDPDKCKACG--ICAKNCPVNAISGKPKVPYVIDQDKCIKCGTCIEKCPFGAIY 594 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CPV+AI Sbjct: 530 CPAG-VCQALLRFYIDPDKCKACGICAKNCPVNAI 563 >gi|269139711|ref|YP_003296412.1| hydrogenase 2 protein [Edwardsiella tarda EIB202] gi|267985372|gb|ACY85201.1| hydrogenase 2 protein [Edwardsiella tarda EIB202] gi|304559580|gb|ADM42244.1| Hydrogenase-2 operon protein hybA precursor [Edwardsiella tarda FL6-60] Length = 327 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 109 IKKQCMHCVDPNCVSVCPVSALRKDPKTGIVTYDPDVCTGCRYCMVACPFDVPKYD 164 >gi|226327475|ref|ZP_03802993.1| hypothetical protein PROPEN_01346 [Proteus penneri ATCC 35198] gi|225204001|gb|EEG86355.1| hypothetical protein PROPEN_01346 [Proteus penneri ATCC 35198] Length = 158 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C CV+ CP ++ G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCDDPICVKNCPTTAMHKRKGDGIVMVDTDKCVGCGACAWSCPYGAPQMNP 130 Query: 60 EPGL 63 E Sbjct: 131 ETKQ 134 >gi|153807874|ref|ZP_01960542.1| hypothetical protein BACCAC_02160 [Bacteroides caccae ATCC 43185] gi|149129483|gb|EDM20697.1| hypothetical protein BACCAC_02160 [Bacteroides caccae ATCC 43185] Length = 635 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E+CI C C + CP D I+PD+CI CG+C C AI Sbjct: 578 LTYTINPEHCIGC--HLCAKNCPADAISGLVRKPHVINPDKCIKCGMCMARCKFKAI 632 >gi|238920366|ref|YP_002933881.1| dimethylsulfoxide reductase, chain B, [Edwardsiella ictaluri 93-146] gi|238869935|gb|ACR69646.1| dimethylsulfoxide reductase, chain B, putative [Edwardsiella ictaluri 93-146] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C CV+VCP ++ E+ F+ + CI C C CP A + + + Sbjct: 60 AYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQYNAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|289829884|ref|ZP_06547372.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 185 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|284921494|emb|CBG34565.1| putative anaerobic dimethyl sulfoxide reductase, Fe-S subunit [Escherichia coli 042] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + + CI C C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDENVCIGCRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|197123120|ref|YP_002135071.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196172969|gb|ACG73942.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 491 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C+ C CP + + + + D CI CG C CP A Sbjct: 60 CMQCEAHPCTVDCPSGATYVDANGVVVVDADVCIGCGTCVAACPYGA 106 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 13/60 (21%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V + CI C CV CP + + ++C C C CP + Sbjct: 87 VDADVCIGCG--TCVAACPYGARHVDPVKNVV--EKCNLCAPFVARGERPACVETCPAEC 142 >gi|153005898|ref|YP_001380223.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029471|gb|ABS27239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 744 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C C CPV ++ + + +CI C C CP + + Sbjct: 78 CMHCDEPACASACPVTAIHKTKEGPVVYDESKCIGCRYCMWACPWGVPMAEWD 130 >gi|157369931|ref|YP_001477920.1| dimethylsulfoxide reductase chain B [Serratia proteamaculans 568] gi|157321695|gb|ABV40792.1| Dimethylsulfoxide reductase chain B [Serratia proteamaculans 568] Length = 205 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPTGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|126701029|ref|YP_001089926.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile 630] gi|254977028|ref|ZP_05273500.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-66c26] gi|255094355|ref|ZP_05323833.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile CIP 107932] gi|255102609|ref|ZP_05331586.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-63q42] gi|255308435|ref|ZP_05352606.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile ATCC 43255] gi|255316108|ref|ZP_05357691.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-76w55] gi|255518769|ref|ZP_05386445.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-97b34] gi|255651947|ref|ZP_05398849.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-37x79] gi|255657359|ref|ZP_05402768.1| putative iron-only hydrogenase,electron-transferring subunit [Clostridium difficile QCD-23m63] gi|260684911|ref|YP_003216196.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile CD196] gi|260688569|ref|YP_003219703.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile R20291] gi|296451827|ref|ZP_06893546.1| NADH dehydrogenase (quinone) [Clostridium difficile NAP08] gi|296879777|ref|ZP_06903751.1| NADH dehydrogenase (quinone) [Clostridium difficile NAP07] gi|306521696|ref|ZP_07408043.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile QCD-32g58] gi|115252466|emb|CAJ70309.1| putative iron-only hydrogenase,electron-transferring subunit HymB-like [Clostridium difficile] gi|260211074|emb|CBA66445.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile CD196] gi|260214586|emb|CBE07152.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile R20291] gi|296259306|gb|EFH06182.1| NADH dehydrogenase (quinone) [Clostridium difficile NAP08] gi|296429248|gb|EFH15121.1| NADH dehydrogenase (quinone) [Clostridium difficile NAP07] Length = 628 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 ++Y +T++C C T C VCP C + I +C+ CG C C +AI Sbjct: 572 LSYFITDDCKGC--TKCSRVCPAGCITGSVKEQHTIDTSKCLKCGACIDNCTFNAI 625 >gi|328952398|ref|YP_004369732.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] gi|328452722|gb|AEB08551.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] Length = 1473 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV + C+ C +C+ CP F + + I P C CG C CP AI Sbjct: 1403 AYVNPDACVGCL--NCLRACPYGVPEFNRELDSIVIDPASCHGCGNCCATCPAMAI 1456 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++PD C+ C C CP + + E Sbjct: 1404 YVNPDACVGCLNCLRACPYGVPEFNRELD 1432 >gi|260597862|ref|YP_003210433.1| anaerobic dimethyl sulfoxide reductase subunit B [Cronobacter turicensis z3032] gi|260217039|emb|CBA30749.1| Anaerobic dimethyl sulfoxide reductase chain B [Cronobacter turicensis z3032] Length = 209 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C CP + EG+ + ++ D+C+ CG C CP A + +T Sbjct: 71 AYTLSISCNHCADPICTRNCPTTAMHKREGDGIVRVNTDKCVGCGYCAWSCPYGAPQRNT 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|307266695|ref|ZP_07548223.1| NADH dehydrogenase (quinone) [Thermoanaerobacter wiegelii Rt8.B1] gi|306918297|gb|EFN48543.1| NADH dehydrogenase (quinone) [Thermoanaerobacter wiegelii Rt8.B1] Length = 596 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 Y+ + C C C + CPV+ I D+CI CG C +CP AI Sbjct: 542 YIDPDKCKACG--ICAKNCPVNAISGKPKVPYVIDQDKCIKCGTCIEKCPFGAIY 594 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CPV+AI Sbjct: 530 CPAG-VCQALLRFYIDPDKCKACGICAKNCPVNAI 563 >gi|227358376|ref|ZP_03842716.1| electron transport protein [Proteus mirabilis ATCC 29906] gi|227161412|gb|EEI46456.1| electron transport protein [Proteus mirabilis ATCC 29906] Length = 186 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +++ + D+CI C C CP ++ + P + Sbjct: 63 CHQCEDAPCANVCPNGAIIHNKDYYYVDQDKCIGCKTCVLACPYGTMEVVSRPVMRKLTA 122 Query: 69 IN 70 +N Sbjct: 123 LN 124 >gi|311108198|ref|YP_003981051.1| benzoyl-CoA oxygenase/reductase BoxA [Achromobacter xylosoxidans A8] gi|310762887|gb|ADP18336.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Achromobacter xylosoxidans A8] Length = 412 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+ N + P+ C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIKAITHDSNNYVVDPEICNGCMACVPPCPTGAI 64 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+ AI D+ Sbjct: 15 IDPEICIRCNTCEETCPIKAITHDSN 40 >gi|302391326|ref|YP_003827146.1| electron transport complex, RnfABCDGE type, B subunit [Acetohalobium arabaticum DSM 5501] gi|302203403|gb|ADL12081.1| electron transport complex, RnfABCDGE type, B subunit [Acetohalobium arabaticum DSM 5501] Length = 423 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +TE C+ C CVE CPVD E I P+ CI+C C CP +AI+ + Sbjct: 371 ITEECVGCGV--CVEECPVDAISGEDGEIHNIDPEVCIECENCVEVCPTEAIETE 423 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +TE C+ C CVE CPVD E I P+ CI+C C CP DAI+ Sbjct: 292 ITEECVGCGV--CVEECPVDAISSEDGEIHNIDPEVCIECENCVEVCPTDAIQSKEGETE 349 Query: 64 E 64 E Sbjct: 350 E 350 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CI C C CPVD +N I +ECI+CGVC CP+D I+ Sbjct: 218 CIGCGV--CETKCPVDAITIEDNLAVIDYEECINCGVCAEACPMDTIEAPKAKDQ 270 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 18/81 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIH--------------PDECIDCGVCE 47 V+ + C C +CVE CP F E + IH CI CGVCE Sbjct: 168 VIADECTGCG--NCVEECPKGLFTLVEEGQEVFIHCSSHSGGKDVKEACKTGCIGCGVCE 225 Query: 48 PECPVDAIKPDTEPGLELWLK 68 +CPVDAI + + + + Sbjct: 226 TKCPVDAITIEDNLAVIDYEE 246 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 22/73 (30%) Query: 7 ENCILCKHTDCVEVCPVDCF--YEGE------------------NFLAIHPDECIDCGVC 46 E CI C+ +CVEVCP D EGE +EC+ CGVC Sbjct: 324 EVCIECE--NCVEVCPTDAIQSKEGETEEAEKTNSNDAAEEDDHECSIYITEECVGCGVC 381 Query: 47 EPECPVDAIKPDT 59 ECPVDAI + Sbjct: 382 VEECPVDAISGED 394 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 24/74 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFY------------EGEN---------FLAIHPDECIDCGV 45 E CI C C E CP+D E E + I +EC+ CGV Sbjct: 245 EECINCGV--CAEACPMDTIEAPKAKDQVSAVDETEETDTGDDRECSIYIT-EECVGCGV 301 Query: 46 CEPECPVDAIKPDT 59 C ECPVDAI + Sbjct: 302 CVEECPVDAISSED 315 Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 DC VC D EN L + DEC CG C ECP + E G E+++ Sbjct: 145 GFGDCEAVCSFDAIKMNENGLPEVIADECTGCGNCVEECPKG-LFTLVEEGQEVFI 199 >gi|300854657|ref|YP_003779641.1| NADH dehydrogenase [Clostridium ljungdahlii DSM 13528] gi|300434772|gb|ADK14539.1| NADH dehydrogenase [Clostridium ljungdahlii DSM 13528] Length = 626 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +E CI C T C +VCP E + I +CI+CG C C AI + Sbjct: 575 SEKCIGC--TACTKVCPKGAISGEIKKSHVIDKSKCINCGACSSTCKFSAITKE 626 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+ ++CI C C CP AI + + Sbjct: 573 INSEKCIGCTACTKVCPKGAISGEIKKSH 601 >gi|89893274|ref|YP_516761.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219666548|ref|YP_002456983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89332722|dbj|BAE82317.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219536808|gb|ACL18547.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 203 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 T C C++ CV+VCPV Y+ E+ I+ D CI C C CP +A Sbjct: 62 TVACQHCENAPCVKVCPVGATYKAEDGRVLINYDRCIGCRYCMAACPYNA 111 >gi|119716585|ref|YP_923550.1| putative glutamate synthase (NADPH) small subunit [Nocardioides sp. JS614] gi|119537246|gb|ABL81863.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nocardioides sp. JS614] Length = 544 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 9 CILCKHT----DCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C+ C + +C VCP + + + I D C CG+C ECP AI+ E Sbjct: 484 CMSCGNCFSCDNCFGVCPDNAITKTGDPDTPYLIDLDYCKGCGLCAAECPAGAIRMAPEE 543 >gi|303257317|ref|ZP_07343331.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302860808|gb|EFL83885.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 197 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 Y + C CK CV+VCP ++ E+ I ++CI C +C CP A Sbjct: 53 YFLPTVCQNCKDAPCVKVCPTGASFKTEDGQVLIDKEKCIGCKMCIAACPYGA 105 >gi|255654945|ref|ZP_05400354.1| iron-dependent hydrogenase [Clostridium difficile QCD-23m63] gi|296449691|ref|ZP_06891461.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296877992|ref|ZP_06902011.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] gi|296261415|gb|EFH08240.1| periplasmic hydrogenase 1 [Clostridium difficile NAP08] gi|296431060|gb|EFH16888.1| periplasmic hydrogenase 1 [Clostridium difficile NAP07] Length = 498 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 23/59 (38%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VTE C C C E C I+ D C CG+C+ C DAI P Sbjct: 107 FTVTELCRGCLAHRCKEACKFGAISYINGRAYINHDLCKACGMCKSSCQYDAISEVVRP 165 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 18/103 (17%) Query: 2 TYVVTENCILCK--------------HTDCVEVCPVDC--FYEGENFLAIHPDECIDCGV 45 Y+ + C C C VCP F IH D CI+CG Sbjct: 137 AYINHDLCKACGMCKSSCQYDAISEVVRPCKSVCPTGALDFNRNTMKAMIHEDNCINCGA 196 Query: 46 CEPECPVDAI--KPDTEPGLELWLKINSEYATQWPNITTKKES 86 C CP AI K P + K + YA P IT + +S Sbjct: 197 CMSACPFGAISDKSLIAPVAKKLAKKENMYAIVAPAITGQIDS 239 >gi|320100963|ref|YP_004176555.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Desulfurococcus mucosus DSM 2162] gi|319753315|gb|ADV65073.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfurococcus mucosus DSM 2162] Length = 637 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ + C C + CP G I + C CG+C CP AI +P Sbjct: 572 VIEDKCTGCNACINLTACPAIVIPTGSRKPVILEELCAGCGLCASICPFKAISVKNQPST 631 Query: 64 ELWLKI 69 E W K+ Sbjct: 632 E-WEKL 636 >gi|254458861|ref|ZP_05072285.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] gi|207084627|gb|EDZ61915.1| 4Fe-4S ferredoxin, iron-sulfur binding [Campylobacterales bacterium GD 1] Length = 212 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C++ C +CPV + +N + I + CI C C CP AI D Sbjct: 57 CNHCQNAPCERICPVSALHYLDNGIVNIDKERCIGCAGCVMACPYGAIYID 107 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 27/82 (32%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 E CI C CV CP I P D+C C C CPV Sbjct: 87 ERCIGCAG--CVMACPYGAI-------YIDPQTQTADKCTYCAHRVASSMMPACVVACPV 137 Query: 53 DA-IKPDTEPG---LELWLKIN 70 A I D + + ++++N Sbjct: 138 QANIFGDLDDPTSNISKYIQVN 159 >gi|269139538|ref|YP_003296239.1| anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda EIB202] gi|267985199|gb|ACY85028.1| anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda EIB202] gi|304559427|gb|ADM42091.1| Anaerobic dimethyl sulfoxide reductase chain B [Edwardsiella tarda FL6-60] Length = 205 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C CV+VCP ++ E+ F+ + CI C C CP A + + + Sbjct: 60 AYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQYNAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|197285542|ref|YP_002151414.1| tetrathionate reductase subunit B [Proteus mirabilis HI4320] gi|227356037|ref|ZP_03840428.1| tetrathionate reductase subunit B [Proteus mirabilis ATCC 29906] gi|194683029|emb|CAR43509.1| tetrathionate reductase subunit B [Proteus mirabilis HI4320] gi|227163814|gb|EEI48722.1| tetrathionate reductase subunit B [Proteus mirabilis ATCC 29906] Length = 246 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C CV VCPV F + + I + C+ C C CP DA Sbjct: 100 CNHCDEPPCVPVCPVQATFQRKDGIVVIDNERCVGCAYCVQACPYDA 146 >gi|320175671|gb|EFW50760.1| Hydrogenase-2 operon protein hybA precursor [Shigella dysenteriae CDC 74-1112] Length = 328 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVYYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|183598540|ref|ZP_02960033.1| hypothetical protein PROSTU_01934 [Providencia stuartii ATCC 25827] gi|188020717|gb|EDU58757.1| hypothetical protein PROSTU_01934 [Providencia stuartii ATCC 25827] Length = 245 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV ++ E+ + I + C+ C C CP DA Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVIDNERCVGCAYCVQACPYDA 146 >gi|158319965|ref|YP_001512472.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] gi|158140164|gb|ABW18476.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] Length = 635 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 MTY + C+ C C VCPV I CI CG C +C +AI+ Sbjct: 572 MTYTIFPSKCVGCGV--CARVCPVHAIRGVVKKPYHIDQATCIKCGACMDQCRFEAIE 627 >gi|78044791|ref|YP_360645.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] gi|77996906|gb|ABB15805.1| iron-sulfur cluster-binding protein CooF [Carboxydothermus hydrogenoformans Z-2901] Length = 187 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C+ C CP Y+ + F+ I+ CI C VC CP AI E E Sbjct: 64 CRQCEDAPCAHACPTGAIYQEDKFVRINEGNCIGCKVCTMVCPFGAIIIAQEEKDE 119 >gi|325970707|ref|YP_004246898.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] gi|324025945|gb|ADY12704.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Spirochaeta sp. Buddy] Length = 369 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C +CV++C D E I ++C+ CG C CP DAI + + K Sbjct: 197 CIGCG--NCVDICAHDAPMITEGLSWIDQNKCVGCGRCIGVCPTDAISNNDNSSND---K 251 Query: 69 INSEYATQWPNITTKKE 85 +N + A I + Sbjct: 252 LNCKIAEYTHAICYTRP 268 >gi|260598003|ref|YP_003210574.1| anaerobic dimethyl sulfoxide reductase subunit B [Cronobacter turicensis z3032] gi|260217180|emb|CBA31029.1| Anaerobic dimethyl sulfoxide reductase chain B [Cronobacter turicensis z3032] Length = 205 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ ++ D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEDVCIGCRYCHMACPYGAPQY 116 >gi|56477160|ref|YP_158749.1| subunit B of a molybdenum enzyme, that of tetrathionate reductase (TTRB) [Aromatoleum aromaticum EbN1] gi|56313203|emb|CAI07848.1| subunit B of a molybdenum enzyme, similar to that of tetrathionate reductase (TTRB) [Aromatoleum aromaticum EbN1] Length = 246 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 TY++ C C CV VCPV F + + + D C+ C C CP DA I + Sbjct: 93 TYMLPRLCNHCDAPPCVPVCPVGATFKREDGIVVVDGDRCVGCAYCVQACPYDARFINHE 152 Query: 59 TEPGLE 64 T + Sbjct: 153 TNKADK 158 >gi|296103099|ref|YP_003613245.1| anaerobic dimethyl sulfoxide reductase, B subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057558|gb|ADF62296.1| anaerobic dimethyl sulfoxide reductase, B subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 205 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ ++ F+ + D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|150017381|ref|YP_001309635.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium beijerinckii NCIMB 8052] gi|149903846|gb|ABR34679.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium beijerinckii NCIMB 8052] Length = 282 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V + C CK C C VD I D+CI CG C CP A+K + E Sbjct: 160 VEADMCKGCK--ICERTCKVDAISMVHKKAVIDYDKCISCGQCVKACPFKAMKLEKE 214 >gi|239623412|ref|ZP_04666443.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239522378|gb|EEQ62244.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 241 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC--EPECPVDAIKP 57 MT + E CI C C + C + C ++I+ +EC+DCGVC C DAI Sbjct: 1 MTVRINKEKCIGCG--RCTDYCMLGCITRDGKKVSINEEECVDCGVCLRAGVCAADAIYM 58 Query: 58 DTE 60 E Sbjct: 59 PDE 61 >gi|217967308|ref|YP_002352814.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] gi|217336407|gb|ACK42200.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] Length = 596 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E C C + C CPV Y+ E+ I +C CG+C CP AIK + Sbjct: 543 VIREECRKC--SICFRNCPVGAIYKDEDGTYVIDQSKCTKCGICFQVCPFSAIKKE 596 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +EC C +C CPV AI D + Sbjct: 540 HYEVIREECRKCSICFRNCPVGAIYKDED 568 >gi|83590554|ref|YP_430563.1| NADH dehydrogenase (quinone) [Moorella thermoacetica ATCC 39073] gi|83573468|gb|ABC20020.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Moorella thermoacetica ATCC 39073] Length = 619 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++YV+ C C C VCPV G+ I P CI CG C +C AI + Sbjct: 562 LSYVIDAGKCTGCG--ACSRVCPVGAISGGKKEAHQIDPAACIKCGSCYEKCRFGAITRE 619 >gi|325281877|ref|YP_004254419.1| Fe-S cluster domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324313686|gb|ADY34239.1| Fe-S cluster domain protein [Odoribacter splanchnicus DSM 20712] Length = 568 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y ENC C CV CPV +N I + CI CG C CP A Sbjct: 7 YTEPENCQDC--YKCVRECPVKAIQIEDNKAYIIEERCIYCGHCTQVCPTGA 56 Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + P+ C DC C ECPV AI+ + Sbjct: 6 IYTEPENCQDCYKCVRECPVKAIQIEDN 33 >gi|298490238|ref|YP_003720415.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein ['Nostoc azollae' 0708] gi|298232156|gb|ADI63292.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein ['Nostoc azollae' 0708] Length = 75 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTDVCEGV--ADCVSACPVACIHEGPGKNIKGTDWYWIDVATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAILPEERPELQK 72 >gi|239623279|ref|ZP_04666310.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239522245|gb|EEQ62111.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 428 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Query: 9 CILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C VCPV G+ + D C+ CGVC C V AI+ P Sbjct: 295 CVGCG--KCARVCPVLAISMKEDGNGKRIPVLDRDICLGCGVCARNCSVKAIELKKRPEQ 352 Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 14/39 (35%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 P+ I C+ CG C CPV AI + Sbjct: 277 PMQPVATTNYIPDISEGTCVGCGKCARVCPVLAISMKED 315 >gi|163749862|ref|ZP_02157107.1| iron-sulfur cluster-binding protein [Shewanella benthica KT99] gi|161330376|gb|EDQ01355.1| iron-sulfur cluster-binding protein [Shewanella benthica KT99] Length = 561 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V T++C LC CV CP +G + A++ +C+ CG+CE CP +AI Sbjct: 426 VNTDSCTLCL--SCVSTCPTQALTDGGDKPALNFLEQDCVQCGLCEKACPENAI 477 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 16/47 (34%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ CP D + I P C G C CP AI D Sbjct: 206 CLNFCPADAIQSINKMIEIDPYLCHGAGSCTNACPTGAISYDLPTPQ 252 >gi|268609516|ref|ZP_06143243.1| hypothetical protein RflaF_08470 [Ruminococcus flavefaciens FD-1] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT++CI C C+ CP C E + I + C+ CG C CPV A+ Sbjct: 153 YFVTDDCIRCG--SCLSDCPQSCI-ELKEKALIRQENCLHCGNCAAVCPVGAV 202 >gi|159903840|ref|YP_001551184.1| ferredoxin [Prochlorococcus marinus str. MIT 9211] gi|159889016|gb|ABX09230.1| Ferredoxin [Prochlorococcus marinus str. MIT 9211] Length = 341 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++T++C+ C C+ VCP D + L I CI CG CE CP A Sbjct: 98 IITDDCVKCNL--CIPVCPTDAI---PSTLEIVDSLCIGCGNCEAVCPPAA 143 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 23 VDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 V G++ + AI D+C+ C +C P CP DAI Sbjct: 84 VSVGMPGDHHVRKAIITDDCVKCNLCIPVCPTDAI 118 >gi|254172099|ref|ZP_04878775.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] gi|214033995|gb|EEB74821.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] Length = 174 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y V NC C+ C+EVCP ++ E+ + D+CI C +C CP + D Sbjct: 30 AYNVPMNCRHCEKAPCMEVCPTGAIFKDEDGAVLVDVDKCIGCKMCAIVCPFGIPEFD 87 >gi|298242537|ref|ZP_06966344.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297555591|gb|EFH89455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 342 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ C C + C E CP E + + + D C CG C CP I D Sbjct: 162 SDVCKHCANAPCQEACPTGAIIRTEFDTVYVQQDICNGCGYCTVACPFGVIARDD 216 >gi|282900139|ref|ZP_06308096.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] gi|281195021|gb|EFA69961.1| 4Fe-4S ferredoxin, iron-sulfur binding [Cylindrospermopsis raciborskii CS-505] Length = 75 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTEICEGV--ADCVDACPVACIHEGPGKNIKGTDWYWIDFTTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P P L+ Sbjct: 59 EGAIVPQERPELQK 72 >gi|304316572|ref|YP_003851717.1| Fe-S cluster domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778074|gb|ADL68633.1| Fe-S cluster domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 436 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I ++CIDCG C CP A Sbjct: 11 DRCKGC--TNCIKRCPTEAIRVRDGKAKIIKEKCIDCGECVRVCPYHA 56 >gi|322421699|ref|YP_004200922.1| Fis family sigma-54 specific transcriptional regulator [Geobacter sp. M18] gi|320128086|gb|ADW15646.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. M18] Length = 760 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +T+ C C CV CPV +++ I + CI CG C CP A Sbjct: 6 TITDQCRKC--YSCVRSCPVKAIKVEKSYTEIIFERCIGCGNCLSNCPQHA 54 >gi|218440077|ref|YP_002378406.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] gi|218172805|gb|ACK71538.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] Length = 74 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTETCEGV--ADCVDACPVACIHPGPGKNMKGTDWYWIDFTTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAIVPEERPDLQK 72 >gi|152969484|ref|YP_001334593.1| anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954333|gb|ABR76363.1| anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|34557777|ref|NP_907592.1| putative oxidoreductase, Fe-S subunit [Wolinella succinogenes DSM 1740] gi|34483494|emb|CAE10492.1| PUTATIVE OXIDOREDUCTASE, FE-S SUBUNIT [Wolinella succinogenes] Length = 217 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y + C C C++ CP ++G + ++ CI C C CP A + D+ Sbjct: 64 AYYTSIACNHCDDPACIKACPTGAMHKGLYGIVEVNQSRCIGCKACAMACPYGAPQFDSR 123 Query: 61 PGL 63 G Sbjct: 124 QGH 126 >gi|52426419|ref|YP_089556.1| hydrogenase 2 protein HybA [Mannheimia succiniciproducens MBEL55E] gi|52308471|gb|AAU38971.1| HybA protein [Mannheimia succiniciproducens MBEL55E] Length = 330 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + PD C C C CP D K D + Sbjct: 108 IKKQCMHCVDPNCVSVCPVQALTKNPKTGIVGYDPDICTGCRYCMVACPFDVPKYDYDNP 167 Query: 63 LEL 65 L Sbjct: 168 LGQ 170 >gi|20089624|ref|NP_615699.1| hypothetical protein MA0739 [Methanosarcina acetivorans C2A] gi|19914545|gb|AAM04179.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 219 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y +TE C C C E+CP +GE I C++CG C CP DAI+P + Sbjct: 164 YKITEKCTACG--ICKELCPSRAISKGE-IYKIDGSICLECGRCAENCPYDAIEPPS 217 >gi|332278371|ref|ZP_08390784.1| hydrogenase 4 Fe-S subunit [Shigella sp. D9] gi|332100723|gb|EGJ04069.1| hydrogenase 4 Fe-S subunit [Shigella sp. D9] Length = 218 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|220917911|ref|YP_002493215.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955765|gb|ACL66149.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 490 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C+ C CP + + + + D CI CG C CP A Sbjct: 59 CMQCEAHPCTVDCPSGATYVDANGVVVVDADVCIGCGTCVAACPYGA 105 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 13/60 (21%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V + CI C CV CP + + ++C C C CP + Sbjct: 86 VDADVCIGCG--TCVAACPYGARHVDPVKHVV--EKCNLCAPFVARGERPACVETCPAEC 141 >gi|331673937|ref|ZP_08374700.1| hydrogenase-4 component A [Escherichia coli TA280] gi|331069210|gb|EGI40602.1| hydrogenase-4 component A [Escherichia coli TA280] Length = 218 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEKAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|152970131|ref|YP_001335240.1| anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954980|gb|ABR77010.1| anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|307545319|ref|YP_003897798.1| electron transporter RnfB [Halomonas elongata DSM 2581] gi|307217343|emb|CBV42613.1| K03616 electron transport complex protein RnfB [Halomonas elongata DSM 2581] Length = 325 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C T C++ CPVD + + EC C +C CPVD I P + Sbjct: 81 DECIGC--TKCIQACPVDAILGAAKQMHTVIESECTGCELCVAPCPVDCIDLLPHPEWQ 137 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 78 IREDECIGCTKCIQACPVDAI 98 >gi|296102541|ref|YP_003612687.1| anaerobic dimethyl sulfoxide reductase, B subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057000|gb|ADF61738.1| anaerobic dimethyl sulfoxide reductase, B subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ ++ F+ ++ D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVNEDVCIGCRYCHMACPYGAPQY 116 >gi|284050914|ref|ZP_06381124.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arthrospira platensis str. Paraca] gi|291569756|dbj|BAI92028.1| ferredoxin-like protein [Arthrospira platensis NIES-39] Length = 75 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV CPV C + G ++ I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGV--ADCVGACPVACIHPGPGKNTKGTDWYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAIVAEERPELQQ 72 >gi|55378014|ref|YP_135864.1| molybdopterin oxidoreductase [Haloarcula marismortui ATCC 43049] gi|55230739|gb|AAV46158.1| molybdopterin oxidoreductase [Haloarcula marismortui ATCC 43049] Length = 276 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 M Y T C C++ CV+VCPV+ Y ++ + I D+CI C C CP +A Sbjct: 64 MQYQPT-ACQHCENAPCVKVCPVNATYTRDDGIVEIDYDKCIGCRYCMAACPYNA 117 >gi|331002204|ref|ZP_08325723.1| hypothetical protein HMPREF0491_00585 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411298|gb|EGG90714.1| hypothetical protein HMPREF0491_00585 [Lachnospiraceae oral taxon 107 str. F0167] Length = 393 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 7/98 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ ++C C T CV+ CP D I C CG C CP DAI D Sbjct: 5 VIEKDCRGC--TKCVKSCPFDAITMENKKAVIG-IACTSCGTCIEVCPFDAIVKDEIEKE 61 Query: 64 ELWLKINSEYATQWPNITTKKESLPS-AAKMDGVKQKY 100 E L + Y W ++ L A ++ G +K Sbjct: 62 ENDLTL---YHDIWVFAEQRQGQLQDVALELLGEGKKL 96 >gi|327400436|ref|YP_004341275.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327315944|gb|AEA46560.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 636 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C CK C+ +CP E I C CG+C P CPV AIK Sbjct: 564 GERCSGCKL--CIALCPYRAISYDEERGVCVIDETFCKGCGICVPACPVGAIKARHYTTE 621 Query: 64 ELWLKI 69 +++ +I Sbjct: 622 QIFAEI 627 Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 25/80 (31%), Gaps = 23/80 (28%) Query: 3 YVVTENCILCKHTDCVEVCPV-------------DCFY---EG--ENFLAIHPDECI--- 41 YV + C+ C C E CPV Y G N I + C+ Sbjct: 236 YVDADKCVGCG--MCTEACPVRVANDYEYGMKERGAIYLPYPGVLPNVPVIDRENCLYTR 293 Query: 42 DCGVCEPECPVDAIKPDTEP 61 C C C +AI + Sbjct: 294 GCQKCIESCAFEAINFEDNA 313 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 I + C C +C CP AI D E G Sbjct: 562 IDGERCSGCKLCIALCPYRAISYDEERG 589 >gi|325278937|ref|YP_004251479.1| Fe-S cluster domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324310746|gb|ADY31299.1| Fe-S cluster domain protein [Odoribacter splanchnicus DSM 20712] Length = 452 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E C C T C+ VCP I+ C DCG+C CP AI + + ++ Sbjct: 14 SEVCTGC--THCMNVCPTAAIRIKYGKATINEAACTDCGMCLKTCPRQAIYVEQDDFNQI 71 Query: 66 W 66 + Sbjct: 72 F 72 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I+ + C C C CP AI+ Sbjct: 10 LKINSEVCTGCTHCMNVCPTAAIR 33 >gi|308274768|emb|CBX31367.1| hypothetical protein N47_E48790 [uncultured Desulfobacterium sp.] Length = 943 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V TE+C+ C CV CP D F + + I +C CGVC CP AI+ + Sbjct: 870 VDTEHCVKCL--TCVRSCPFDVPVFNIEKQIIEIDDAKCQGCGVCASVCPRQAIQLNYYE 927 Query: 62 GLELWLKINSEYA 74 ++ KI++ A Sbjct: 928 DNQITSKIDALLA 940 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 20/69 (28%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA------------------IHPDECIDCGVCEPEC 50 C C +C CPV L I + CI CG+CE C Sbjct: 48 CTGCG--ECARHCPVTAINRYNKGLDERRATFIEYPQAVPLAFGIDANTCIGCGLCESMC 105 Query: 51 PVDAIKPDT 59 AI+ D Sbjct: 106 VAKAIRYDD 114 Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 11/22 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I P C CG C CPV AI Sbjct: 42 YIDPVICTGCGECARHCPVTAI 63 >gi|322419374|ref|YP_004198597.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] gi|320125761|gb|ADW13321.1| NADH dehydrogenase (quinone) [Geobacter sp. M18] Length = 489 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV C+ C T C VCPV C + + I + CI CG C C AI Sbjct: 435 FVVAAKCVGC--TACARVCPVSCISGKAKEVHLIDQNSCIKCGACIERCKFGAI 486 >gi|89892418|gb|ABD78998.1| HI1046-like protein [Haemophilus influenzae] Length = 122 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ + I + + CI C C CP DA + D + Sbjct: 60 AYYMSISCNHCADPACTKVCPTGAMHKNADGFVIVNEEICIGCRYCHMACPYDAPQYDAQ 119 >gi|260910260|ref|ZP_05916937.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635764|gb|EEX53777.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 55 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV+ +CI C C+ CPV+ EG + I D C +CG C CP +AI Sbjct: 1 MAYVIGNDCIACG--TCLPECPVEAISEG-DIYKIDADACTECGTCASVCPSEAI 52 >gi|194442787|ref|YP_002040746.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401450|gb|ACF61672.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ + D CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|56413983|ref|YP_151058.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362906|ref|YP_002142543.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128240|gb|AAV77746.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094383|emb|CAR59898.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ + D CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|50120186|ref|YP_049353.1| hydrogenase-4 component A [Pectobacterium atrosepticum SCRI1043] gi|49610712|emb|CAG74157.1| hydrogenase-4 component A [Pectobacterium atrosepticum SCRI1043] Length = 206 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C+ C VCPV+ + ++ CI C +C CP AI P Sbjct: 51 CRQCEDAPCARVCPVNAITHENAAIVLNESLCIGCKLCGLVCPFGAITP 99 >gi|169831040|ref|YP_001717022.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637884|gb|ACA59390.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 995 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 25/80 (31%), Gaps = 20/80 (25%) Query: 4 VVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECIDCGV 45 V E C C C VCPV D F G + P+ CI+C + Sbjct: 104 VAAEACKGCGD--CAAVCPVEVPDAFNMGFGTRKAIYQPYSQAYPRAYVLDPEHCIECTL 161 Query: 46 CEPECPVDAIKPDTEPGLEL 65 C CP A+ Sbjct: 162 CVEACPTGAVTLGAPEEASQ 181 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E C C CV VCP + N I P +C CG+C ECP AI Sbjct: 917 ARVTPEKCAACLG--CVRVCPFNVPVIAGNISWIEPVQCQGCGICVAECPNAAIH 969 >gi|121535868|ref|ZP_01667666.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305533|gb|EAX46477.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 235 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP-------VDAIKPDT 59 C C++ CV VCPV Y+G++ + I +CI C C CP A D Sbjct: 80 PCFQCENPPCVPVCPVKATYKGDDGIVVIDYTKCIGCRSCVAACPYGARTFDAGAYYTDG 139 Query: 60 EPGLELWLKINS-EYATQW 77 P ++ + K + EY W Sbjct: 140 TPAVQEYEKAAAFEYGKAW 158 >gi|300930083|ref|ZP_07145509.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|300462010|gb|EFK25503.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] Length = 218 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|256017375|ref|ZP_05431240.1| hydrogenase 4, 4Fe-4S subunit [Shigella sp. D9] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|238893956|ref|YP_002918690.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella pneumoniae NTUH-K2044] gi|238546272|dbj|BAH62623.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|227328564|ref|ZP_03832588.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 674 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +N + + ++CI C C CP A+ T P + Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTSPVDNSAIA 115 Query: 69 INSEYATQWP 78 + P Sbjct: 116 HKCDLCADRP 125 >gi|113954804|ref|YP_730603.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311] gi|113882155|gb|ABI47113.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311] Length = 74 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G +F I D CIDCG+C CPV Sbjct: 1 MAHTIVTDICEGV--ADCVDACPVACIKPGSGANKKGTDFYWIDFDTCIDCGICLQVCPV 58 Query: 53 -DAIKPDTEPGLE 64 +AI P+ L+ Sbjct: 59 ANAIVPEERADLQ 71 >gi|315652760|ref|ZP_07905734.1| electron transfer flavoprotein alpha subunit [Eubacterium saburreum DSM 3986] gi|315484962|gb|EFU75370.1| electron transfer flavoprotein alpha subunit [Eubacterium saburreum DSM 3986] Length = 393 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 7/98 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ ++C C T CV+ CP D I C CG C CP DAI D Sbjct: 5 VIEKDCRGC--TKCVKSCPFDAITMENKKAVIG-IACTSCGTCIEVCPFDAIVKDEIEKE 61 Query: 64 ELWLKINSEYATQWPNITTKKESLPS-AAKMDGVKQKY 100 E L + Y W ++ L A ++ G +K Sbjct: 62 ENDLTL---YHDIWVFAEQRQGQLQDVALELLGEGKKL 96 >gi|303239624|ref|ZP_07326149.1| NADH dehydrogenase (quinone) [Acetivibrio cellulolyticus CD2] gi|302592795|gb|EFL62518.1| NADH dehydrogenase (quinone) [Acetivibrio cellulolyticus CD2] Length = 598 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M YV+ E C C C + CPV GE I ++C+ CGVC +CP AI Sbjct: 540 MKYVINAETCKSCG--ICAKQCPVGAIS-GEKKVPYVIDQNKCVKCGVCMEKCPFKAI 594 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 15/63 (23%) Query: 1 MTYVVTENCILCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M +V+ C VC I+ + C CG+C +CPV AI + Sbjct: 523 MAHVI--------DKKCPAGVCKSMM------KYVINAETCKSCGICAKQCPVGAISGEK 568 Query: 60 EPG 62 + Sbjct: 569 KVP 571 >gi|53802318|ref|YP_112990.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] gi|53756079|gb|AAU90370.1| ferredoxin, 4Fe-4S [Methylococcus capsulatus str. Bath] Length = 87 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 14/83 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE+ I P C +C C CPV+ Sbjct: 1 MALIITDECINCDV--CEPECPNGAISQGEDIYVIDPARCTECVGHFERPQCVEVCPVEC 58 Query: 55 IKPDTEPGLEL------WLKINS 71 I PD + + ++++N+ Sbjct: 59 IHPDPDYREDHDTLYRKYVELNA 81 >gi|327311122|ref|YP_004338019.1| Formate dehydrogenase subunit beta [Thermoproteus uzoniensis 768-20] gi|326947601|gb|AEA12707.1| Formate dehydrogenase, beta subunit [Thermoproteus uzoniensis 768-20] Length = 281 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 C+ C + C CP + I+ D+CI CG CE CP D + Sbjct: 95 CMHCVNPPCARACPSGAISVTPEGAVVINKDQCIGCGFCENACPYDVPR 143 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 16/56 (28%), Gaps = 14/56 (25%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVD 53 + CI C C CP D G + +C C C CP Sbjct: 125 DQCIGCGF--CENACPYDVPRRGSDGKYY---KCTFCVDRIQNGREPACVEVCPTG 175 >gi|117621401|ref|YP_857038.1| hydrogenase 2 protein HybA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562808|gb|ABK39756.1| hydrogenase-2 operon protein HybA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 341 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + PD C C C CP D K D + Sbjct: 109 IKKQCMHCVDPNCVSVCPVQALTKDPKTGIVHYDPDVCTGCRYCMVGCPFDVPKYDYDNP 168 Query: 63 L 63 L Sbjct: 169 L 169 >gi|83590297|ref|YP_430306.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573211|gb|ABC19763.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 1067 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V C C CV VCP ++ I P C CG C CP AI Sbjct: 871 VEGACAACL--TCVRVCPHGAPAIKDHRSHIDPLLCQGCGACVAACPARAI 919 >gi|311280192|ref|YP_003942423.1| dimethylsulfoxide reductase, chain B [Enterobacter cloacae SCF1] gi|311280195|ref|YP_003942426.1| dimethylsulfoxide reductase, chain B [Enterobacter cloacae SCF1] gi|308749387|gb|ADO49139.1| dimethylsulfoxide reductase, chain B [Enterobacter cloacae SCF1] gi|308749390|gb|ADO49142.1| dimethylsulfoxide reductase, chain B [Enterobacter cloacae SCF1] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|255993975|ref|ZP_05427110.1| conserved domain protein [Eubacterium saphenum ATCC 49989] gi|255993643|gb|EEU03732.1| conserved domain protein [Eubacterium saphenum ATCC 49989] Length = 55 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +T+ C+ C C+ CPV+ EG +I P+ CIDCG C C AI Sbjct: 1 MAYEITDACVACG--ACISECPVEAISEGSP-YSIDPNTCIDCGACASVCGAAAI 52 >gi|260597696|ref|YP_003210267.1| formate dehydrogenase-H ferredoxin subunit [Cronobacter turicensis z3032] gi|260216873|emb|CBA30415.1| Electron transport protein hydN [Cronobacter turicensis z3032] Length = 197 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ P Sbjct: 74 CRQCEDAPCASVCPNGAISRDGDFVHVHQQRCIGCKTCVVACPYGAMEVVVRP 126 >gi|16330286|ref|NP_441014.1| ferredoxin [Synechocystis sp. PCC 6803] gi|1652775|dbj|BAA17694.1| ferredoxin [Synechocystis sp. PCC 6803] Length = 75 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCVE CPV C + G+ ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTETCEGV--ADCVEACPVACIHPGDGKNTIGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAILPEERPDLQK 72 >gi|323700274|ref|ZP_08112186.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio sp. ND132] gi|323460206|gb|EGB16071.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio desulfuricans ND132] Length = 704 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 E C+ CV CP D + G L I P+ C CG C CP I Sbjct: 136 EGCLGLG--SCVRACPFDAIHMGPEGLPVIDPNRCKACGNCVDACPRGVI 183 >gi|320180612|gb|EFW55541.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella boydii ATCC 9905] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPVCTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|300853894|ref|YP_003778878.1| putative 4Fe-4S ferredoxin [Clostridium ljungdahlii DSM 13528] gi|300434009|gb|ADK13776.1| putative 4Fe-4S ferredoxin [Clostridium ljungdahlii DSM 13528] Length = 184 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C+ CPV+ E + + I+ CI C C CPV A+ Sbjct: 64 CRHCEDAPCLNACPVNAIVEKDGSIIINESACIGCQTCTIVCPVGAV 110 >gi|298369582|ref|ZP_06980899.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282139|gb|EFI23627.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 284 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + ++ CI C T C+ CPVD + + DEC CG+C CPVD I Sbjct: 72 LAWIDETACIGC--TACIRACPVDAIMGARKLMHTVIADECTGCGLCVAPCPVDCIH 126 >gi|157371163|ref|YP_001479152.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia proteamaculans 568] gi|157322927|gb|ABV42024.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Serratia proteamaculans 568] Length = 184 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 M + ++ +C C C+EVCP D + + + + + D+CI C +C CP +A D Sbjct: 50 MAF-ISMSCNHCDDPQCMEVCPADTYSKRPDGIVVQDHDKCIGCRMCIMACPYNAPVFD 107 >gi|50123378|ref|YP_052545.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium atrosepticum SCRI1043] gi|49613904|emb|CAG77357.1| anaerobically expressed oxidoreductase [Pectobacterium atrosepticum SCRI1043] Length = 674 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP + +N + + ++CI C C CP A+ T P + Sbjct: 56 CRHCEDAPCASVCPTQALIKKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNPMDNSAIA 115 Query: 69 INSEYATQWP 78 + P Sbjct: 116 HKCDLCADRP 125 >gi|194437650|ref|ZP_03069746.1| hydrogenase-4 component A [Escherichia coli 101-1] gi|253772627|ref|YP_003035458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162456|ref|YP_003045564.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli B str. REL606] gi|297517623|ref|ZP_06936009.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli OP50] gi|194423456|gb|EDX39447.1| hydrogenase-4 component A [Escherichia coli 101-1] gi|242378081|emb|CAQ32852.1| hydrogenase 4, component A, subunit of hydrogenase 4 [Escherichia coli BL21(DE3)] gi|253323671|gb|ACT28273.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974357|gb|ACT40028.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli B str. REL606] gi|253978524|gb|ACT44194.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BL21(DE3)] gi|323961274|gb|EGB56886.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323970998|gb|EGB66247.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 205 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|289522359|ref|ZP_06439213.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504195|gb|EFD25359.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 590 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + T+ CI C T C +CPV + I +C+ CG C+ CPV AI D Sbjct: 535 YTINTDLCIGC--TRCARICPVGAISGKVKEPHEIDDAKCVRCGQCKQTCPVSAIFVD 590 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 7/55 (12%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 K C +VCP I+ D CI C C CPV AI + E Sbjct: 518 HVKDKKCPAKVCP------SLIRYTINTDLCIGCTRCARICPVGAISGKVKEPHE 566 >gi|260913909|ref|ZP_05920383.1| tetrathionate reductase subunit B [Pasteurella dagmatis ATCC 43325] gi|260631996|gb|EEX50173.1| tetrathionate reductase subunit B [Pasteurella dagmatis ATCC 43325] Length = 245 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV Y+ ++ + I+ + CI C C CP DA I +T+ + Sbjct: 99 CNHCDNPPCVPVCPVQATYQRKDGIVVINNERCIGCAYCVQACPYDARFINEETKTADK 157 >gi|219667285|ref|YP_002457720.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537545|gb|ACL19284.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 228 Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 YV T C C + CV CP Y+ + L +H P++CI C C CP + I +++ Sbjct: 53 YVPT-LCNHCDNAACVRACPTKAMYKDDKGLTLHDPNKCIGCKSCMQACPYEVINYNSKE 111 Query: 62 GLELW 66 W Sbjct: 112 PHGYW 116 >gi|317969911|ref|ZP_07971301.1| iron-sulfur cluster-binding protein [Synechococcus sp. CB0205] Length = 74 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G F I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGV--ADCVDACPVACINPGTGANAKGTEFYWIDFDTCIDCGICLQVCPV 58 Query: 53 -DAIKPDTEPGLE 64 AI P+ +P L+ Sbjct: 59 AGAIVPEEKPELQ 71 >gi|283785102|ref|YP_003364967.1| oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] gi|282948556|emb|CBG88146.1| putative oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] Length = 222 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C+EVCP + E + + CI CG C CP + P ++ Sbjct: 90 QSCQHCEDAPCIEVCPTGASWRDERGIVRVDGSRCIGCGYCIGACPYQVRYLHPQSKVAD 149 Query: 64 ELWLKINSEYATQWPNIT 81 + S A +P I Sbjct: 150 KCDFCAESRLAKGFPPIC 167 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 26/92 (28%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG----------VCEP 48 V CI C + C+ CP +HP D+C C +C Sbjct: 119 VDGSRCIGCGY--CIGACPYQV-------RYLHPQSKVADKCDFCAESRLAKGFPPICVS 169 Query: 49 ECPVDAIKP--DTEPGLELWLKINSEYATQWP 78 CP A+ + P ++ WL N Y Q P Sbjct: 170 SCPEQALLFGREDSPQIQRWLHDNVWYQHQLP 201 >gi|238894601|ref|YP_002919335.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella pneumoniae NTUH-K2044] gi|238546917|dbj|BAH63268.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|225619733|ref|YP_002720990.1| iron only hydrogenase large subunit, C-terminal domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225214552|gb|ACN83286.1| iron only hydrogenase large subunit, C-terminal domain protein [Brachyspira hyodysenteriae WA1] Length = 490 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VT C C C+ CP D E I +CI+CG+C CP AI Sbjct: 112 FMVTNACQACLARPCMVNCPKDAITILDEKRAHIDSSKCINCGLCLKNCPYHAI 165 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 15/68 (22%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVC 46 ++ + CI C C E CPV + + I +CI CG C Sbjct: 143 AHIDSSKCINCGLCLKNCPYHAIIYIPVPCEESCPVGAINKNDQGKEVIDYHKCIFCGNC 202 Query: 47 EPECPVDA 54 ECP A Sbjct: 203 MRECPFSA 210 >gi|158522835|ref|YP_001530705.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] gi|158511661|gb|ABW68628.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] Length = 699 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 8 NC-ILC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +C C + DC++ C D GE+ + P +C+ CG CE CP + I+ T Sbjct: 132 DCPTGCLGYGDCIKACAFDAIVMGEDGYPVVDPAKCVGCGACEAVCPKNIIRVKT-MSQR 190 Query: 65 LWLKINSEYATQWP 78 L+ + N+ P Sbjct: 191 LF-EFNATNGAHAP 203 >gi|300865547|ref|ZP_07110328.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oscillatoria sp. PCC 6506] gi|300336453|emb|CBN55478.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oscillatoria sp. PCC 6506] Length = 75 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV- 52 M + + N I DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTN-ICEGVADCVDACPVACIHEGPGKNVKGTDWYWIDFQTCIDCGICLQVCPVA 59 Query: 53 DAIKPDTEPGLEL 65 AI + P L+ Sbjct: 60 GAIVAEERPELQQ 72 >gi|328952049|ref|YP_004369383.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452373|gb|AEB08202.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1014 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E C C CV CP D F + + I P +C CGVC ECP AI+ Sbjct: 942 VDGEICAACL--ICVRACPFDVPFINDKGYSEIDPAKCHGCGVCAAECPAKAIQ 993 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 14/77 (18%) Query: 3 YVVTENCILC-----KHTDCVEVCPV------DCFY---EGENFLAIHPDECIDCGVCEP 48 Y+ TE C C K +CV P C + +I ++C + Sbjct: 105 YIDTEKCTACGECYRKFPECVRFTPGLDHRAPTCMRYPKTTPDAFSIDMEKCTNKDELVK 164 Query: 49 ECPVDAIKPDTEPGLEL 65 CP AI D P + Sbjct: 165 VCPAGAIILDDGPKTQE 181 >gi|325288996|ref|YP_004265177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324964397|gb|ADY55176.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 427 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +++ C+ C C EVCPV EG + + + C+ CGVC CP +A++ Sbjct: 290 ISQECVGCG--KCAEVCPVLAISRPDNKEGRTAVQVDHEVCLGCGVCVRSCPKNAVEF 345 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Query: 39 ECIDCGVCEPECPVDAI-KPDTEPG 62 EC+ CG C CPV AI +PD + G Sbjct: 293 ECVGCGKCAEVCPVLAISRPDNKEG 317 >gi|77919429|ref|YP_357244.1| ferredoxin 2 [Pelobacter carbinolicus DSM 2380] gi|77545512|gb|ABA89074.1| ferredoxin 2 [Pelobacter carbinolicus DSM 2380] Length = 583 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 Y C C + CV CPV + I P++C+ CG C CP +A ++ D + Sbjct: 12 YTRETECQDC--SKCVRYCPVKAIKVADGQARIVPEKCVACGTCVRVCPANAKRVRDDLD 69 Query: 61 P-------GLELWLKINSEYATQWPNITT 82 P +++ + Y +++P+I + Sbjct: 70 PTKRMLLSSDRVYVSLAPSYVSEFPDIPS 98 >gi|307257755|ref|ZP_07539512.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863661|gb|EFM95587.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C CV+VCP ++ + ++ D CI C C CP DA + Sbjct: 60 AYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEDTCIGCRYCSMACPYDAPQY 116 >gi|206578002|ref|YP_002237195.1| AegA protein [Klebsiella pneumoniae 342] gi|290508337|ref|ZP_06547708.1| oxidoreductase Fe-S binding subunit [Klebsiella sp. 1_1_55] gi|206567060|gb|ACI08836.1| AegA protein [Klebsiella pneumoniae 342] gi|289777731|gb|EFD85728.1| oxidoreductase Fe-S binding subunit [Klebsiella sp. 1_1_55] Length = 660 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV CP D + + + + ++CI C C CP Sbjct: 56 CRHCEDAPCVRSCPNDAIAQSGDSVQVSQEKCIGCKSCMVACPFG 100 >gi|190151004|ref|YP_001969529.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249916|ref|ZP_07336118.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253741|ref|ZP_07339877.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248722|ref|ZP_07530735.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250968|ref|ZP_07532894.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253340|ref|ZP_07535212.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255583|ref|ZP_07537388.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260034|ref|ZP_07541746.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262162|ref|ZP_07543813.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264361|ref|ZP_07545949.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916135|gb|ACE62387.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647397|gb|EFL77617.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650979|gb|EFL81133.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854649|gb|EFM86839.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856996|gb|EFM89126.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859204|gb|EFM91245.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861432|gb|EFM93421.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865870|gb|EFM97746.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868139|gb|EFM99964.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870313|gb|EFN02069.1| Anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C CV+VCP ++ + ++ D CI C C CP DA + Sbjct: 60 AYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEDTCIGCRYCSMACPYDAPQY 116 >gi|42526786|ref|NP_971884.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] gi|41817101|gb|AAS11795.1| Fe-hydrogenase large subunit family protein [Treponema denticola ATCC 35405] Length = 493 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++T C C C+ CP I ++CI+CG+C CP A+ Sbjct: 112 YMITNACQACVARPCMMNCPKTAIAISGGRARIDEEKCINCGICLKNCPYHAV 164 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 15/63 (23%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C E CPV + EN I +CI CG C ECP Sbjct: 147 EKCINCGICLKNCPYHAVIKIPVPCEEACPVGAISKDENGKERIDYHKCIFCGNCMRECP 206 Query: 52 VDA 54 A Sbjct: 207 FGA 209 >gi|284922428|emb|CBG35515.1| hydrogenase-4 component A [Escherichia coli 042] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|226329951|ref|ZP_03805469.1| hypothetical protein PROPEN_03864 [Proteus penneri ATCC 35198] gi|225200746|gb|EEG83100.1| hypothetical protein PROPEN_03864 [Proteus penneri ATCC 35198] Length = 154 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y +T +C C+ CV+ CP + EG+ + + +C+ CG C CP A + + Sbjct: 71 AYTLTISCNHCESPVCVKNCPTTAMHKREGDGIVRVDTSKCVGCGYCAWSCPYGAPQMNE 130 Query: 60 EPGL 63 E G Sbjct: 131 ETGQ 134 >gi|206578545|ref|YP_002239452.1| anaerobic dimethyl sulfoxide reductase, B subunit [Klebsiella pneumoniae 342] gi|288936302|ref|YP_003440361.1| dimethylsulfoxide reductase, chain B [Klebsiella variicola At-22] gi|290510643|ref|ZP_06550013.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella sp. 1_1_55] gi|206567603|gb|ACI09379.1| anaerobic dimethyl sulfoxide reductase, B subunit [Klebsiella pneumoniae 342] gi|288891011|gb|ADC59329.1| dimethylsulfoxide reductase, chain B [Klebsiella variicola At-22] gi|289777359|gb|EFD85357.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella sp. 1_1_55] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|237732453|ref|ZP_04562934.1| aegA [Citrobacter sp. 30_2] gi|226907992|gb|EEH93910.1| aegA [Citrobacter sp. 30_2] Length = 659 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++P +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHDNDSVQVNPQKCIGCKSCVVACPFG 100 >gi|157156854|ref|YP_001463806.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] gi|157078884|gb|ABV18592.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ + CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNENLCIGCKLCAVVCPFGAI 97 >gi|317056952|ref|YP_004105419.1| hypothetical protein Rumal_2302 [Ruminococcus albus 7] gi|315449221|gb|ADU22785.1| hypothetical protein Rumal_2302 [Ruminococcus albus 7] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y V ++CI C C+ CP C E I + C+ CG C CPV A+ Sbjct: 153 YFVNDDCIGCG--SCLSACPQSCI-ELNGKAVIRQENCLHCGNCAEVCPVGAV 202 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 38 DECIDCGVCEPECPVDAIK 56 D+CI CG C CP I+ Sbjct: 157 DDCIGCGSCLSACPQSCIE 175 >gi|301057563|ref|ZP_07198643.1| electron transfer flavoprotein FAD-binding domain protein [delta proteobacterium NaphS2] gi|300448287|gb|EFK11972.1| electron transfer flavoprotein FAD-binding domain protein [delta proteobacterium NaphS2] Length = 405 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M VV E C CK CVE CP I+ D C +CG C C AI + Sbjct: 1 MPVVVNEEKCKGCKL--CVEACPYAAISMRNKKAVIN-DGCTNCGSCIDSCEFGAIGFE 56 >gi|154491084|ref|ZP_02031025.1| hypothetical protein PARMER_01005 [Parabacteroides merdae ATCC 43184] gi|154088832|gb|EDN87876.1| hypothetical protein PARMER_01005 [Parabacteroides merdae ATCC 43184] Length = 262 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C C++ C++VCPV ++ + P CI C C ECP A DT Sbjct: 192 DLCTQCEY--CIDVCPVSAISIVDDRIFSDPATCIKCCACVKECPEGARTFDTP 243 Score = 34.0 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 10/32 (31%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 D C C C CPV AI + Sbjct: 183 TPQAPVTDEDLCTQCEYCIDVCPVSAISIVDD 214 >gi|300940277|ref|ZP_07154874.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300454918|gb|EFK18411.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 218 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|289191966|ref|YP_003457907.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938416|gb|ADC69171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 141 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + + + + D+CI CG+C CP AI+ D Sbjct: 33 CMHCDKNPCLYACPENAIERINDKVVVIKDKCIGCGLCALACPFGAIRID 82 >gi|237731458|ref|ZP_04561939.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] gi|226906997|gb|EEH92915.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter sp. 30_2] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY 116 >gi|226952541|ref|ZP_03823005.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter sp. ATCC 27244] gi|226836723|gb|EEH69106.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter sp. ATCC 27244] Length = 267 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI--KPDTEP 61 + CI C T C+ CPVD G+ +I D C C +C P CPVD I PDT+P Sbjct: 94 DECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCIDLIPDTKP 149 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 91 IREDECIGCTKCISACPVDAI 111 >gi|91204283|emb|CAJ71936.1| hypothetical protein kustc1191 [Candidatus Kuenenia stuttgartiensis] Length = 308 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CVE C D + + I ++C++CG+C CPV IK Sbjct: 193 ECIEC--MKCVEACREDAITVKDAQVTIDKEKCVECGICAKVCPVGTIK 239 >gi|288934133|ref|YP_003438192.1| glutamate synthase, small subunit [Klebsiella variicola At-22] gi|288888862|gb|ADC57180.1| glutamate synthase, small subunit [Klebsiella variicola At-22] Length = 660 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV CP D + + + + ++CI C C CP Sbjct: 56 CRHCEDAPCVRSCPNDAIAQSGDSVQVSQEKCIGCKSCMVACPFG 100 >gi|253570623|ref|ZP_04848031.1| H2-dehydrogenase [Bacteroides sp. 1_1_6] gi|251839572|gb|EES67655.1| H2-dehydrogenase [Bacteroides sp. 1_1_6] Length = 387 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV--DAIKPDTE 60 NC C C EVCP C + F + CIDCG CE CP IK DT Sbjct: 11 NCSGCN--ACAEVCPKHCIEMVPDKKGFFYPKVDAVTCIDCGACEKVCPFQDGNIKLDTP 68 Query: 61 PGLELWLKINSE 72 L + N + Sbjct: 69 --LTAYAAWNKD 78 >gi|253701320|ref|YP_003022509.1| electron transfer flavoprotein subunit alpha [Geobacter sp. M21] gi|251776170|gb|ACT18751.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. M21] Length = 439 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 V+ CI C C CPVD E I +CI C C CP AI+ P Sbjct: 17 VLEGRCIACGAR-CQSACPVDAIQMNEAGEPIVDASKCIGCVKCVKVCPAQAIEMAFTPE 75 Query: 63 LE 64 + Sbjct: 76 EK 77 >gi|152971333|ref|YP_001336442.1| putative oxidoreductase Fe-S binding subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956182|gb|ABR78212.1| putative oxidoreductase, Fe-S subunit (anaerobically expressed gene) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 637 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV CP D + + + + ++CI C C CP Sbjct: 33 CRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFG 77 >gi|300951821|ref|ZP_07165633.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301644471|ref|ZP_07244468.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|331643098|ref|ZP_08344233.1| hydrogenase-4 component A [Escherichia coli H736] gi|300448952|gb|EFK12572.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301077216|gb|EFK92022.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|331039896|gb|EGI12116.1| hydrogenase-4 component A [Escherichia coli H736] Length = 218 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|23015034|ref|ZP_00054824.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 4/63 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTE 60 + +C+ C CV CPV + + + D CI C C CP + DT Sbjct: 115 IKRSCLHCADPSCVSACPVSAMQKRPTDGVVTYNKDACIGCRYCVAACPFGVPQFQYDTP 174 Query: 61 PGL 63 Sbjct: 175 TPQ 177 >gi|313201532|ref|YP_004040190.1| RnfABCDGE type electron transport complex subunit B [Methylovorus sp. MP688] gi|312440848|gb|ADQ84954.1| electron transport complex, RnfABCDGE type, B subunit [Methylovorus sp. MP688] Length = 280 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 ++ + CI C T C++ CPVD + + DEC C +C CPVD I + Sbjct: 94 AFIDEQTCIGC--TLCIQACPVDAILGASKQMHTVIADECTGCELCIAPCPVDCITMEPP 151 Query: 61 P 61 P Sbjct: 152 P 152 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE 30 M V+ + C C+ C+ CPVDC Sbjct: 123 MHTVIADECTGCEL--CIAPCPVDCITMEP 150 >gi|300817759|ref|ZP_07097974.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300820857|ref|ZP_07101007.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300903489|ref|ZP_07121414.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|301302831|ref|ZP_07208959.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|309794478|ref|ZP_07688901.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|331678465|ref|ZP_08379140.1| hydrogenase-4 component A [Escherichia coli H591] gi|300404521|gb|EFJ88059.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300526610|gb|EFK47679.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300529747|gb|EFK50809.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300841766|gb|EFK69526.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|308121934|gb|EFO59196.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|315256495|gb|EFU36463.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|324020155|gb|EGB89374.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] gi|331074925|gb|EGI46245.1| hydrogenase-4 component A [Escherichia coli H591] Length = 218 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|257792484|ref|YP_003183090.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476381|gb|ACV56701.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 217 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 V C+ C+ CV+ CP ++ + I ++CI CG+C CP A Sbjct: 55 VPNACVQCEKPACVDACPTGASVRRDDGITVIDYEKCIACGLCLAACPYGA 105 >gi|170019234|ref|YP_001724188.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|169754162|gb|ACA76861.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|309702761|emb|CBJ02090.1| hydrogenase-4 component A [Escherichia coli ETEC H10407] gi|320200042|gb|EFW74631.1| Hydrogenase-4 component A [Escherichia coli EC4100B] gi|323941262|gb|EGB37447.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|332344300|gb|AEE57634.1| hydrogenase-4, subunit A HyfA [Escherichia coli UMNK88] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|116070524|ref|ZP_01467793.1| ferredoxin [Synechococcus sp. BL107] gi|116065929|gb|EAU71686.1| ferredoxin [Synechococcus sp. BL107] Length = 74 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +V+E C DCV+ CPV C +G +F I+ D CIDCG+C CPV Sbjct: 1 MAHTIVSEVCEGI--ADCVDACPVACIDQGNGKNTKGTDFYVINFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAILAEERPDLQK 72 >gi|78221282|ref|YP_383029.1| sigma-54 dependent trancsriptional regulator [Geobacter metallireducens GS-15] gi|78192537|gb|ABB30304.1| sigma54 specific transcriptional regulator, Fis family [Geobacter metallireducens GS-15] Length = 756 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 1 MTYVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++T E C C CV CPV +++ I D CI CG C CP A Sbjct: 1 MEPIITVKEKCRKC--YCCVRSCPVKAIKVAKSYTEIIVDRCIGCGNCLSNCPQQA 54 >gi|167040768|ref|YP_001663753.1| Fe-S cluster domain-containing protein [Thermoanaerobacter sp. X514] gi|256750978|ref|ZP_05491861.1| Fe-S cluster domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914806|ref|ZP_07132122.1| Fe-S cluster domain protein [Thermoanaerobacter sp. X561] gi|307723960|ref|YP_003903711.1| Fe-S cluster domain-containing protein [Thermoanaerobacter sp. X513] gi|166855008|gb|ABY93417.1| Fe-S cluster domain protein [Thermoanaerobacter sp. X514] gi|256750088|gb|EEU63109.1| Fe-S cluster domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889741|gb|EFK84887.1| Fe-S cluster domain protein [Thermoanaerobacter sp. X561] gi|307581021|gb|ADN54420.1| Fe-S cluster domain protein [Thermoanaerobacter sp. X513] Length = 435 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYV--VT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M+Y VT + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 1 MSYFHSVTLDKDRCRGC--TNCIKRCPTEAIRVRDGKAMIINERCIDCGECIRVCPYHA 57 >gi|293410876|ref|ZP_06654452.1| conserved hypothetical protein [Escherichia coli B354] gi|291471344|gb|EFF13828.1| conserved hypothetical protein [Escherichia coli B354] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|238920547|ref|YP_002934062.1| hydrogenase 2 protein HybA [Edwardsiella ictaluri 93-146] gi|238870116|gb|ACR69827.1| hydrogenase 2 protein HybA [Edwardsiella ictaluri 93-146] Length = 327 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + PD C C C CP D K D + Sbjct: 109 IKKQCMHCVDPNCVSVCPVSALKKHPVTGIVMYDPDVCTGCRYCMVACPFDVPKYDYD 166 >gi|325505030|dbj|BAJ83592.1| putative selenate reductase subunit B [Bacillus selenatarsenatis] Length = 292 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C+H C +VCP+ Y+ E+ + I D+CI C C CP A Sbjct: 137 PCMQCEHPPCTKVCPIGATYKSEDGIVAIDYDKCIGCRYCITACPYGA 184 >gi|255502227|gb|ACU11593.1| HydII [Thermoanaerobacterium saccharolyticum] Length = 436 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I ++CIDCG C CP A Sbjct: 11 DRCKGC--TNCIKRCPTEAIRVRDGKAKIIKEKCIDCGECVRVCPYHA 56 >gi|325205297|gb|ADZ00750.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M04-240196] Length = 279 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|323936373|gb|EGB32663.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|300856191|ref|YP_003781175.1| fumarate reductase/succinate dehydrogenase flavoprotein-like protein [Clostridium ljungdahlii DSM 13528] gi|300436306|gb|ADK16073.1| fumarate reductase/succinate dehydrogenase flavoprotein-like protein [Clostridium ljungdahlii DSM 13528] Length = 926 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 YV C C C+EVCP DC + +++ I +C CG+C ECP +AI Sbjct: 322 YVDPRKCKGCG--KCLEVCPEDCIEAKKGYISMIDEFDCTKCGICIDECPNNAI 373 Score = 40.5 bits (94), Expect = 0.085, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Query: 21 CPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CP C + + P +C CG C CP D I+ Sbjct: 310 CPAGQCLAFTN--IYVDPRKCKGCGKCLEVCPEDCIE 344 >gi|293415744|ref|ZP_06658387.1| hydrogenase-4 component A [Escherichia coli B185] gi|291433392|gb|EFF06371.1| hydrogenase-4 component A [Escherichia coli B185] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|302528270|ref|ZP_07280612.1| formate dehydrogenase, beta subunit [Streptomyces sp. AA4] gi|302437165|gb|EFL08981.1| formate dehydrogenase, beta subunit [Streptomyces sp. AA4] Length = 276 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C P CP I+ Sbjct: 96 SDVCKHCTHAACLDVCPTGALFRTEFDTVVVQQDICNGCGYCVPACPYGVIE 147 >gi|187251887|ref|YP_001876369.1| electron transfer flavoprotein subunit alpha [Elusimicrobium minutum Pei191] gi|186972047|gb|ACC99032.1| Electron transfer flavoprotein alpha subunit [Elusimicrobium minutum Pei191] Length = 397 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + NCI C T CV +CP ++ C CG C PECPV I ++ Sbjct: 4 IGSNCIGC--TKCVRICPFGALSMDGKKAVVN-SACTLCGACIPECPVKCISMPSQ 56 >gi|218778029|ref|YP_002429347.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759413|gb|ACL01879.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 352 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E CI C C E C +D E+ ++PD CI CGVC +CP DA+ + Sbjct: 273 VDDEKCIACG--ACAEACHMDAITV-EDAAFVNPDRCIGCGVCVSQCPSDAMAYQQKKQP 329 Query: 64 ELWL 67 + ++ Sbjct: 330 DQYV 333 >gi|157377341|ref|YP_001475941.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319715|gb|ABV38813.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 231 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 V C C + CV VCPV+ Y E + + I +ECI C +C CP A Sbjct: 84 VPNQCNQCDNPACVYVCPVEATYKREEDGIVVIDHEECIHCQLCVDACPYGA 135 >gi|15676135|ref|NP_273266.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis MC58] gi|7225430|gb|AAF40665.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58] gi|316985127|gb|EFV64079.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria meningitidis H44/76] gi|325199417|gb|ADY94872.1| iron-sulfur cluster-binding protein [Neisseria meningitidis H44/76] Length = 279 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|257063357|ref|YP_003143029.1| dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit [Slackia heliotrinireducens DSM 20476] gi|256791010|gb|ACV21680.1| dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit [Slackia heliotrinireducens DSM 20476] Length = 425 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 6 TENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C++ ++ + C C C +N +AI ++CI CG C CP +AI P Sbjct: 23 AERCLMVRNRNARCNRCAAACVSGCINTHDNRIAIDAEKCIGCGTCATVCPTEAIAPRNP 82 Query: 61 PGLE 64 LE Sbjct: 83 DDLE 86 >gi|218700939|ref|YP_002408568.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI39] gi|218370925|emb|CAR18744.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI39] Length = 205 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|189485409|ref|YP_001956350.1| 4Fe-4S binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287368|dbj|BAG13889.1| 4Fe-4S binding protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 57 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y + EN C+ C C CPV + E+ I+ D+C CGVCE CPV AI Sbjct: 1 MAYQINENACVGCG--ACAGSCPVSAIEQKEDKYTINSDKCKGCGVCESTCPVSAI 54 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I+ + C+ CG C CPV AI+ + Sbjct: 5 INENACVGCGACAGSCPVSAIEQKED 30 >gi|126460114|ref|YP_001056392.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249835|gb|ABO08926.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 229 Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C++T C VCP Y+ E + + + CI CG C CP + Sbjct: 62 FISSLCYHCENTPCQRVCPTGATYKTEEGVVLVDKELCIGCGYCIVACPYGSRYRPEPHE 121 Query: 63 LEL 65 Sbjct: 122 WRE 124 >gi|323704276|ref|ZP_08115855.1| Fe-S cluster domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536342|gb|EGB26114.1| Fe-S cluster domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 436 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I ++CIDCG C CP A Sbjct: 11 DRCKGC--TNCIKRCPTEAIRVRDGKAKIIKEKCIDCGECVRVCPYHA 56 >gi|303328543|ref|ZP_07358979.1| tetrathionate reductase complex, subunit B [Desulfovibrio sp. 3_1_syn3] gi|302861374|gb|EFL84312.1| tetrathionate reductase complex, subunit B [Desulfovibrio sp. 3_1_syn3] Length = 245 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C CK C+ VCPV Y+ +N + I CI CG C CP DA Sbjct: 95 CNHCKEPACLPVCPVKATYQHDNGIVVIDASACIGCGFCVQACPYDA 141 >gi|254805750|ref|YP_003083971.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|254669291|emb|CBA08254.1| putative ferredoxin [Neisseria meningitidis alpha14] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|225376805|ref|ZP_03754026.1| hypothetical protein ROSEINA2194_02447 [Roseburia inulinivorans DSM 16841] gi|225211301|gb|EEG93655.1| hypothetical protein ROSEINA2194_02447 [Roseburia inulinivorans DSM 16841] Length = 375 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V TE CI C C +C ++ I D+C+ CG C CP DAI D Sbjct: 191 VATEACIGCG--ACGRICAHGAPVITDHKAKIDHDKCVGCGRCLAVCPKDAISAD 243 >gi|226328967|ref|ZP_03804485.1| hypothetical protein PROPEN_02869 [Proteus penneri ATCC 35198] gi|225202153|gb|EEG84507.1| hypothetical protein PROPEN_02869 [Proteus penneri ATCC 35198] Length = 189 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 +T +C C C++VCP D + + E+ + + D+CI C +C CP +A D Sbjct: 55 FITMSCNHCDDPQCLKVCPADTYTKREDGIVVQDHDKCIGCQMCIMACPYNAPVYD 110 >gi|170729134|ref|YP_001763160.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814481|gb|ACA89065.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 560 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V T+ C LC CV CP +G + A+H +C+ CG+CE CP AI Sbjct: 425 VNTQACTLCL--SCVSTCPTQALTDGGDKPALHFVEQDCVQCGLCESACPEKAI 476 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + I P C G C CP AI D L ++ Sbjct: 205 CLNFCPADAIQSIDKMIEIDPYLCHGAGSCTNACPTGAISYDLPTPQALHSYLHKLVTRF 264 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 265 REQAQIAPVI 274 >gi|307596268|ref|YP_003902585.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551469|gb|ADN51534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 263 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C C++ CV VCP Y+ + + I+ + CI C CE CP I D Sbjct: 70 TFSVPISCFHCRNPACVTVCPTGAIYKRKEDGVVVINYEVCIGCRYCENACPYGNIIFDP 129 Query: 60 EPGLELW--LKINSEYATQWP 78 G+ + I+ Y P Sbjct: 130 VEGVSKKCVMAIDRIYDESLP 150 >gi|261368062|ref|ZP_05980945.1| iron-sulfur cluster-binding protein [Subdoligranulum variabile DSM 15176] gi|282570052|gb|EFB75587.1| iron-sulfur cluster-binding protein [Subdoligranulum variabile DSM 15176] Length = 368 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV E C+ C CV++C D + + +I ++C+ CG C CP DA++ + Sbjct: 190 PYVKQELCVGCG--RCVKICAHDAPHIVDRKSSIDQNKCVGCGRCIGVCPTDAVRAAEDE 247 Query: 62 GLELWLKIN---SEYAT 75 ++ +N +EY+ Sbjct: 248 SNDI---LNCKIAEYSK 261 >gi|154174046|ref|YP_001408940.1| formate dehydrogenase iron-sulfur subunit [Campylobacter curvus 525.92] gi|112804000|gb|EAU01344.1| formate dehydrogenase iron-sulfur subunit [Campylobacter curvus 525.92] Length = 190 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEPGL 63 T C C C +VCPVDCFY + + +H +CI C C CP A + + Sbjct: 53 TIACQHCTDAPCEQVCPVDCFYIRADGIVLHDKHKCIGCAYCLYACPFGAPQFPRDGAF 111 >gi|317492597|ref|ZP_07951024.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919347|gb|EFV40679.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 326 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 108 IKKQCMHCVDANCVSVCPVQALRKDPKTGIVHYDPDVCTGCRYCMVGCPFDVPKYD 163 >gi|298571367|gb|ADI87709.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [uncultured Nitrospirae bacterium MY3-5B] Length = 266 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA-------IKPDT 59 C+ C+ C EVCPV ++ + + I D+CI C C CP A + Sbjct: 111 PCMQCELPPCTEVCPVGATWKRLDGVVAIDYDKCIGCRYCLSACPYGARTSDFNEYYTEN 170 Query: 60 EPGLELWLKI-NSEYATQWPNITTKKESLPSAAK 92 P ++ + + N+EY W + KK + +A K Sbjct: 171 TPKIQPYELLPNNEYGKAW-SRKDKKSPVGNARK 203 >gi|269216392|ref|ZP_06160246.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] gi|269130651|gb|EEZ61729.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] Length = 170 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C C+EVCPV + E+ + + D CI C C CP DA D + G Sbjct: 41 PCQHCDTPSCIEVCPVGATSKREDGVVVVDKDICIGCASCVSACPYDARAIDADAG 96 >gi|257460510|ref|ZP_05625611.1| electron transport protein HydN [Campylobacter gracilis RM3268] gi|257441841|gb|EEV16983.1| electron transport protein HydN [Campylobacter gracilis RM3268] Length = 199 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP N++ +H + CI C +C CP AI + E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFDNNYIELHEEICIGCKMCTLACPYGAISSNAE 104 >gi|300867907|ref|ZP_07112547.1| XRE family transcriptional regulator [Oscillatoria sp. PCC 6506] gi|300334044|emb|CBN57723.1| XRE family transcriptional regulator [Oscillatoria sp. PCC 6506] Length = 534 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGV-----CEPECPVDAI 55 M+Y +T CI C C +CP + ++ I P+ C +C C CPV++ Sbjct: 1 MSYSITNRCIQCD--TCEPLCPTEAIKRKDDKYWIDPNLCDNCENYSAPQCVICCPVNSP 58 Query: 56 KP 57 P Sbjct: 59 VP 60 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%) Query: 40 CIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 CI C CEP CP +AIK + W+ N Sbjct: 9 CIQCDTCEPLCPTEAIK---RKDDKYWIDPN 36 >gi|281601885|gb|ADA74869.1| Hydrogenase 4 Fe-S subunit [Shigella flexneri 2002017] Length = 218 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|298346148|ref|YP_003718835.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii ATCC 43063] gi|304390092|ref|ZP_07372046.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654727|ref|ZP_07907633.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii ATCC 51333] gi|298236209|gb|ADI67341.1| anaerobic dimethyl sulfoxide reductase, chain B [Mobiluncus curtisii ATCC 43063] gi|304326574|gb|EFL93818.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491191|gb|EFU80810.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii ATCC 51333] Length = 212 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C++ C+EVCP E+ + + +C+ C C+ CP A + + E Sbjct: 67 AYYVSISCNHCEYPVCMEVCPTTAMSRREDGTVYVDESKCVGCRYCQWACPYGAPQLNPE 126 Query: 61 PGL 63 G Sbjct: 127 TGH 129 >gi|170683521|ref|YP_001744664.1| hydrogenase-4 component A [Escherichia coli SMS-3-5] gi|170521239|gb|ACB19417.1| hydrogenase-4 component A [Escherichia coli SMS-3-5] Length = 205 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|159900206|ref|YP_001546453.1| cyclic nucleotide-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893245|gb|ABX06325.1| cyclic nucleotide-binding protein [Herpetosiphon aurantiacus ATCC 23779] Length = 454 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +T++C C+ +CVE CP +N D C C C CP DA++ T Sbjct: 335 ITQSCRQCRVGAECVEACPEAAIQWDDNGALRITDACTGCNECVLACPYDAVESQT 390 >gi|77918997|ref|YP_356812.1| glycerol dehydratase activating enzyme [Pelobacter carbinolicus DSM 2380] gi|77545080|gb|ABA88642.1| glycerol dehydratase, cobalamin-independent, small subunit [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 9/80 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI----K 56 V+ NCI C C+EVC + G L I D C CG C C AI + Sbjct: 68 FVSNNCIGCG--KCLEVCKAGAIRKDETGAKGLIIDRDRCTLCGQCAKFCYAGAINIIGR 125 Query: 57 PDTEPGLELWLKINSEYATQ 76 + P L ++ + ++ Q Sbjct: 126 YLSVPELVTMIERDRKFYEQ 145 >gi|77460730|ref|YP_350237.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens Pf0-1] gi|77384733|gb|ABA76246.1| putative electron transpor-related protein [Pseudomonas fluorescens Pf0-1] Length = 404 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 Y+ CI C T C++ CP+D I DEC C +C CPVD I+ Sbjct: 74 AYIREAECIGC--TKCIQACPIDAIVGAAKLMHTVII-DECTGCDLCVAPCPVDCIE 127 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I ECI C C CP+DAI Sbjct: 71 PQVAYIREAECIGCTKCIQACPIDAI 96 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 103 MHTVIIDECTGCDL--CVAPCPVDCIEM 128 >gi|325145280|gb|EGC67558.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240013] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDESACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|317406714|gb|EFV86874.1| tetrathionate reductase subunit B [Achromobacter xylosoxidans C54] Length = 255 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + + C+ CG C CP DA I DT+ + Sbjct: 111 CNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDARFINHDTQTADK 169 >gi|253690638|ref|YP_003019828.1| glutamate synthase, small subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757216|gb|ACT15292.1| glutamate synthase, small subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 674 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNP 108 >gi|220925117|ref|YP_002500419.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219949724|gb|ACL60116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium nodulans ORS 2060] Length = 670 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C+EVCP + +A+ P C CG C CP A P Sbjct: 284 TRCLEVCPTGAIAPAGDHVAVDPFVCAGCGACASVCPTGAAAYTLPPAD 332 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE C LC CV CP + + L C+ CG+C CP D I + Sbjct: 521 TEACTLC--HACVGACPTSALSDDPDRPVLTFSESLCVQCGLCAATCPEDVITLEPRLDF 578 Query: 64 ELWLK 68 W Sbjct: 579 AAWAA 583 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 4/51 (7%) Query: 22 PVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 PVD L + C C C CP A+ D + + + + Sbjct: 502 PVDRIALDPGAPFGGLVFRTEACTLCHACVGACPTSALSDDPDRPVLTFSE 552 >gi|85859306|ref|YP_461508.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85722397|gb|ABC77340.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 346 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C CVEVCP G++ L + CI C C CP A+K E + Sbjct: 197 EKCTKCG--TCVEVCPTGAAQFGDDGLPFYDHEVCIGCAQCIGFCPALALKIHWETDAAV 254 Query: 66 WLKINSE-YATQWPNITTK 83 + + E A W I + Sbjct: 255 FQEKLVETAAAVWRQIEGR 273 Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 37 PDECIDCGVCEPECPVDAIKPDTE 60 P++C CG C CP A + + Sbjct: 196 PEKCTKCGTCVEVCPTGAAQFGDD 219 >gi|116754868|ref|YP_843986.1| methyl-viologen-reducing hydrogenase, delta subunit [Methanosaeta thermophila PT] gi|116666319|gb|ABK15346.1| CoB--CoM heterodisulfide reductase subunit A [Methanosaeta thermophila PT] Length = 791 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V + CI C CV+ CP ++ + C CG C CPVDAI+ Sbjct: 577 AFVDRDKCIGC--RLCVDTCPSRAISV-KDTAFVDEARCKGCGTCAAACPVDAIEMRLFS 633 Query: 62 GLELWLKINSE 72 ++ +I + Sbjct: 634 DEQILAQIRAA 644 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 19/79 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENFLA-------------IHPDECIDCG 44 YV C C + +C CPV+ E G+ I + CI CG Sbjct: 242 YVDPTLCKGCIN-ECSSACPVEVPNEYDFGLGKRKAIYMAIPQSVPLVACIDTNACIGCG 300 Query: 45 VCEPECPVDAIKPDTEPGL 63 +C CP DA+K D + Sbjct: 301 LCAEACPADAVKYDQQAEE 319 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + D+CI C +C CP AI Sbjct: 570 IELDPTVAFVDRDKCIGCRLCVDTCPSRAI 599 >gi|294649835|ref|ZP_06727237.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter haemolyticus ATCC 19194] gi|292824318|gb|EFF83119.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter haemolyticus ATCC 19194] Length = 267 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI--KPDTEP 61 + CI C T C+ CPVD G+ +I D C C +C P CPVD I PDT+P Sbjct: 94 DECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCIDLIPDTKP 149 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 91 IREDECIGCTKCISACPVDAI 111 >gi|170717615|ref|YP_001784697.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Haemophilus somnus 2336] gi|168825744|gb|ACA31115.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haemophilus somnus 2336] Length = 245 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV+VCPV Y+ ++ + I CI C C CP DA I +T+ + Sbjct: 99 CNHCDNPPCVQVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDARFINSETKTADK 157 >gi|90021997|ref|YP_527824.1| aspartate carbamoyltransferase [Saccharophagus degradans 2-40] gi|89951597|gb|ABD81612.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 615 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF-LAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C+ C++ CP + + + I PD C CG C CP +A + D G Sbjct: 109 ISMACNHCEEPVCLKGCPTRAYTKHPEYGAVIQDPDICFGCGYCTWVCPYNAPQLDPVAG 168 Query: 63 L 63 Sbjct: 169 Q 169 >gi|157161943|ref|YP_001459261.1| hydrogenase-4 component A [Escherichia coli HS] gi|191167653|ref|ZP_03029463.1| hydrogenase-4 component A [Escherichia coli B7A] gi|193068427|ref|ZP_03049390.1| hydrogenase-4 component A [Escherichia coli E110019] gi|209919956|ref|YP_002294040.1| hydrogenase 4 Fe-S subunit [Escherichia coli SE11] gi|218696110|ref|YP_002403777.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli 55989] gi|293446836|ref|ZP_06663258.1| hyfA [Escherichia coli B088] gi|312973284|ref|ZP_07787456.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|331669220|ref|ZP_08370068.1| hydrogenase-4 component A [Escherichia coli TA271] gi|157067623|gb|ABV06878.1| hydrogenase-4 component A [Escherichia coli HS] gi|190902333|gb|EDV62072.1| hydrogenase-4 component A [Escherichia coli B7A] gi|192958379|gb|EDV88819.1| hydrogenase-4 component A [Escherichia coli E110019] gi|209913215|dbj|BAG78289.1| hydrogenase 4 Fe-S subunit [Escherichia coli SE11] gi|218352842|emb|CAU98637.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli 55989] gi|291323666|gb|EFE63094.1| hyfA [Escherichia coli B088] gi|310331879|gb|EFP99114.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|323944700|gb|EGB40767.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|331064414|gb|EGI36325.1| hydrogenase-4 component A [Escherichia coli TA271] Length = 205 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|325129008|gb|EGC51858.1| iron-sulfur cluster-binding protein [Neisseria meningitidis N1568] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|82777863|ref|YP_404212.1| hydrogenase 4 Fe-S subunit [Shigella dysenteriae Sd197] gi|81242011|gb|ABB62721.1| hydrogenase 4 Fe-S subunit [Shigella dysenteriae Sd197] Length = 218 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|89109287|ref|AP_003067.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. W3110] gi|90111444|ref|NP_416976.4| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|170082091|ref|YP_001731411.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|238901646|ref|YP_002927442.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BW2952] gi|256021833|ref|ZP_05435698.1| hydrogenase 4, 4Fe-4S subunit [Escherichia sp. 4_1_40B] gi|301023842|ref|ZP_07187575.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|307139115|ref|ZP_07498471.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli H736] gi|140645|sp|P23481|HYFA_ECOLI RecName: Full=Hydrogenase-4 component A gi|147018|gb|AAB88563.1| HyfA [Escherichia coli] gi|1799909|dbj|BAA16359.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K12 substr. W3110] gi|87082114|gb|AAC75534.2| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|169889926|gb|ACB03633.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|238861459|gb|ACR63457.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli BW2952] gi|260448440|gb|ACX38862.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|299880642|gb|EFI88853.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|315137104|dbj|BAJ44263.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli DH1] gi|315615724|gb|EFU96356.1| hydrogenase-4 component A [Escherichia coli 3431] Length = 205 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|206896460|ref|YP_002247481.1| indolepyruvate oxidoreductase subunit IorA (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit alpha) [Coprothermobacter proteolyticus DSM 5265] gi|206739077|gb|ACI18155.1| indolepyruvate oxidoreductase subunit IorA (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit alpha) [Coprothermobacter proteolyticus DSM 5265] Length = 638 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 7 ENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E C C CV + CP F + ++I D C C C CP +AI + G + Sbjct: 560 EKCTGC--RVCVNLLGCPALVFDRDKKKVSIDEDLCAGCSACAQVCPYNAIYEKSIEGEK 617 Query: 65 LWLKINSEYATQW 77 + ++ E +W Sbjct: 618 NFDVVSDESRARW 630 >gi|217968807|ref|YP_002354041.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|217506134|gb|ACK53145.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 222 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y V +C C C+ CP +N + I CI C CE CP A + D Sbjct: 78 AYKVNMSCNHCADPACLPTCPTGAIWKRADNGVVDIDSTLCIGCRRCEAACPYGAPQWD 136 >gi|162456775|ref|YP_001619142.1| putative anaerobic reductase component [Sorangium cellulosum 'So ce 56'] gi|161167357|emb|CAN98662.1| putative anaerobic reductase component [Sorangium cellulosum 'So ce 56'] Length = 580 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C+ CPV + + + H D+CI C C CP DA K + E G Sbjct: 127 VTTACHHCLDPACMSGCPVKAYEKDPITGIVKHLDDQCIGCQYCILMCPYDAPKFNAERG 186 >gi|296313314|ref|ZP_06863255.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria polysaccharea ATCC 43768] gi|296840194|gb|EFH24132.1| electron transport complex, RnfABCDGE type, B subunit [Neisseria polysaccharea ATCC 43768] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|218265299|ref|ZP_03478757.1| hypothetical protein PRABACTJOHN_04467 [Parabacteroides johnsonii DSM 18315] gi|218221524|gb|EEC94174.1| hypothetical protein PRABACTJOHN_04467 [Parabacteroides johnsonii DSM 18315] Length = 252 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C C++ C++VCPV ++ + P CI C C ECP A DT Sbjct: 182 DLCTQCEY--CIDVCPVSAISIVDDRMFSDPATCIKCCACVKECPEGARTFDTP 233 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 10/27 (37%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 D C C C CPV AI + Sbjct: 178 VTDEDLCTQCEYCIDVCPVSAISIVDD 204 >gi|304389020|ref|ZP_07371066.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] gi|304337001|gb|EFM03189.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ATCC 13091] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|261391743|emb|CAX49192.1| putative ferredoxin [Neisseria meningitidis 8013] gi|325197493|gb|ADY92949.1| iron-sulfur cluster-binding protein [Neisseria meningitidis G2136] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|254670133|emb|CBA05130.1| putative ferredoxin [Neisseria meningitidis alpha153] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|332296989|ref|YP_004438911.1| NADH dehydrogenase (quinone) [Treponema brennaborense DSM 12168] gi|332180092|gb|AEE15780.1| NADH dehydrogenase (quinone) [Treponema brennaborense DSM 12168] Length = 593 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 ++ +TE CI C C CP +C GE + I +C+ CG CE C +AI Sbjct: 538 SFFITEKCIGCG--ACARQCPANCIT-GEKKMRHTIEQSKCLKCGACETTCKFNAI 590 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++CI CG C +CP + I + + Sbjct: 543 EKCIGCGACARQCPANCITGEKK 565 >gi|330811333|ref|YP_004355795.1| Electron transport complex protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379441|gb|AEA70791.1| Electron transport complex protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 341 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + I DEC C +C CPVD I+ Sbjct: 74 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTILIDECTGCDLCVAPCPVDCIE 127 >gi|313672549|ref|YP_004050660.1| electron transport complex, rnfabcdge type, b subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939305|gb|ADR18497.1| electron transport complex, RnfABCDGE type, B subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 260 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C + CPVD N I P++CI+CG C+ CP AI Sbjct: 212 ACIACKL--CQKNCPVDAITVENNLAYIDPNKCINCGKCKEVCPTKAI 257 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 6 TENCI-LC-KHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 T+ CI C CV C D Y G + I ++C CG C CP I+ Sbjct: 131 TKQCIYGCVGGGSCVTACKFDAIYIGNEGIPIVDAEKCTACGACVKACPRKLIE 184 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 18/71 (25%) Query: 4 VVTENCILCKHTDCVEVCP--------------VDC--FYEGENFLAIHPDECIDCGVCE 47 V E C C CV+ CP V C +G + CI C +C+ Sbjct: 163 VDAEKCTACG--ACVKACPRKLIEIVPVDKRFTVTCRSIDKGVDAKNFCKVACIACKLCQ 220 Query: 48 PECPVDAIKPD 58 CPVDAI + Sbjct: 221 KNCPVDAITVE 231 >gi|262045103|ref|ZP_06018139.1| anaerobic dimethyl sulfoxide reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037550|gb|EEW38785.1| anaerobic dimethyl sulfoxide reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 164 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 19 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 78 Query: 61 PGL 63 G Sbjct: 79 KGH 81 >gi|121634081|ref|YP_974326.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|120865787|emb|CAM09516.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|325133026|gb|EGC55699.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M6190] gi|325139098|gb|EGC61644.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ES14902] Length = 279 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|20091692|ref|NP_617767.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Methanosarcina acetivorans C2A] gi|41017214|sp|Q8TM02|HDRA_METAC RecName: Full=CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit A gi|19916866|gb|AAM06247.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Methanosarcina acetivorans C2A] Length = 793 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V + CI C CVEVC + C CG C CPV AI+ Sbjct: 573 AHVDPDKCIGC--RTCVEVCKFGKISIENKKAVVDEVSCYGCGDCSAACPVGAIQ 625 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 19/84 (22%) Query: 3 YVVTENCILCKHTDCVEVCPVD-------------CFYE-----GENFLAIHPDECIDCG 44 +V+ + C C C VCPV+ Y + I PD C+ CG Sbjct: 237 FVLEDKCKGCVDL-CSGVCPVEIENPMNYGIGKTRAIYMPIPQSVPQVVLIDPDHCVGCG 295 Query: 45 VCEPECPVDAIKPDTEPGLELWLK 68 +C+ CP +A+ + +P + Sbjct: 296 LCQLACPAEAVDYEQKPEEIEFEA 319 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 11/25 (44%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPD 58 + PD+CI C C C I + Sbjct: 574 HVDPDKCIGCRTCVEVCKFGKISIE 598 >gi|320640865|gb|EFX10353.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. G5101] Length = 209 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + ++ D+C+ CG C CP A + + Sbjct: 71 AYTLSVSCNHCADPICTKNCPTMAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|302387337|ref|YP_003823159.1| Electron transfer flavoprotein alpha/beta-subunit [Clostridium saccharolyticum WM1] gi|302197965|gb|ADL05536.1| Electron transfer flavoprotein alpha/beta-subunit [Clostridium saccharolyticum WM1] Length = 393 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ E C C + CV+ CP D EN LA+ C CGVC +CP DAI Sbjct: 5 VIKEKCRGC--SICVKNCPFDAITM-ENKLAVIGTACTGCGVCVEKCPFDAI 53 >gi|225018512|ref|ZP_03707704.1| hypothetical protein CLOSTMETH_02459 [Clostridium methylpentosum DSM 5476] gi|224948713|gb|EEG29922.1| hypothetical protein CLOSTMETH_02459 [Clostridium methylpentosum DSM 5476] Length = 203 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +T++CI C C +CP C G I C+ CG+C+ +CPV AI+ Sbjct: 149 FQITDSCIECG--RCRRICPQQCIEPGSP-YVIRQQNCLHCGLCQEQCPVQAIE 199 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D CI+CG C CP I+P + Sbjct: 153 DSCIECGRCRRICPQQCIEPGSP 175 >gi|160939954|ref|ZP_02087300.1| hypothetical protein CLOBOL_04844 [Clostridium bolteae ATCC BAA-613] gi|158437098|gb|EDP14864.1| hypothetical protein CLOBOL_04844 [Clostridium bolteae ATCC BAA-613] Length = 427 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENF---LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C C + CPV EGEN + D C+ CGVC+ C V AI + Sbjct: 292 GDQCVGCG--KCAKTCPVLAISMEEGENGRKRAVVDKDICLGCGVCDRNCGVKAIHMERR 349 Query: 61 PGL 63 Sbjct: 350 TEQ 352 >gi|118431940|ref|NP_148720.2| molybdopterin oxidoreductase, iron-sulfur binding subunit [Aeropyrum pernix K1] gi|116063262|dbj|BAA81623.2| molybdopterin oxidoreductase, iron-sulfur binding subunit [Aeropyrum pernix K1] Length = 233 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C + CV+VCPV Y E+ + + D CI CG C CP A Sbjct: 101 VPKQCNHCDNPSCVDVCPVKATYVNEDGIVLVDDDLCIGCGACIQNCPYGA 151 >gi|322832179|ref|YP_004212206.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] gi|321167380|gb|ADW73079.1| dimethylsulfoxide reductase, chain B [Rahnella sp. Y9602] Length = 205 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ ++ D CI C C CP A + + Sbjct: 60 AYYLSISCNHCADPACTKVCPSGAMHKREDGFVVVNEDICIGCRYCHMACPYGAPQYNEA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|284007051|emb|CBA72326.1| glutamate synthase (NADPH) small chain [Arsenophonus nasoniae] Length = 603 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C + C+ CPVD + + + CI C C CP AI Sbjct: 52 IAVTCRHCNNAPCITSCPVDALRFVSATVQLDQNRCIGCKSCIIACPFGAI 102 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Query: 31 NFLAI-HPDECIDCGVCEPEC 50 N + I P ECI C VCE C Sbjct: 2 NKMIIADPSECIGCHVCEIAC 22 >gi|157165183|ref|YP_001467594.1| methyl-accepting chemotaxis sensory transducer [Campylobacter concisus 13826] gi|157101508|gb|EAT98488.2| selenate reductase subunit beta (Selenate reductaseiron-sulfur subunit) [Campylobacter concisus 13826] Length = 245 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C C++VCP Y+ N + I ECI C +C CP A Sbjct: 94 CNHCNKPACIDVCPTGASYQRSNGIVKIDTKECIGCALCVEACPYHA 140 >gi|153879377|ref|ZP_02004810.1| Ferredoxin [Beggiatoa sp. PS] gi|152064159|gb|EDN65190.1| Ferredoxin [Beggiatoa sp. PS] Length = 93 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C CP +GE I P+ C +C C CPVD Sbjct: 7 MALYITDECINCDV--CEPECPNGAISQGEEIYIIDPNLCTECVGHYETSQCVDVCPVDC 64 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I P E K+ +Y +T KK Sbjct: 65 I-PKDPNHEESEEKLREKYYRLTKELTDKK 93 >gi|24113810|ref|NP_708320.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 301] gi|30063859|ref|NP_838030.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|110806414|ref|YP_689934.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 5 str. 8401] gi|24052897|gb|AAN44027.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 301] gi|30042114|gb|AAP17840.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|110615962|gb|ABF04629.1| hydrogenase 4 Fe-S subunit [Shigella flexneri 5 str. 8401] gi|313650937|gb|EFS15337.1| hydrogenase-4 component A [Shigella flexneri 2a str. 2457T] gi|332755122|gb|EGJ85487.1| hydrogenase-4 component A [Shigella flexneri 4343-70] gi|332755521|gb|EGJ85885.1| hydrogenase-4 component A [Shigella flexneri K-671] gi|332756570|gb|EGJ86921.1| hydrogenase-4 component A [Shigella flexneri 2747-71] gi|332766287|gb|EGJ96497.1| 4Fe-4S binding domain protein [Shigella flexneri 2930-71] gi|333001869|gb|EGK21435.1| hydrogenase-4 component A [Shigella flexneri K-218] gi|333016253|gb|EGK35584.1| hydrogenase-4 component A [Shigella flexneri K-304] Length = 205 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|320180465|gb|EFW55396.1| Hydrogenase-4 component A [Shigella boydii ATCC 9905] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|300921411|ref|ZP_07137771.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|331653906|ref|ZP_08354907.1| hydrogenase-4 component A [Escherichia coli M718] gi|300411645|gb|EFJ94955.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|331048755|gb|EGI20831.1| hydrogenase-4 component A [Escherichia coli M718] Length = 218 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|254673479|emb|CBA08875.1| putative ferredoxin [Neisseria meningitidis alpha275] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDESACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|283832972|ref|ZP_06352713.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] gi|291071579|gb|EFE09688.1| dimethylsulfoxide reductase, chain B [Citrobacter youngae ATCC 29220] Length = 210 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 72 AYTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQMNE 131 Query: 60 EPGL 63 E G Sbjct: 132 EAGQ 135 >gi|227113131|ref|ZP_03826787.1| putative oxidoreductase Fe-S binding subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 626 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +N + + ++CI C C CP A+ T P + Sbjct: 56 CRHCEDAPCASVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTSPVDNSTIA 115 Query: 69 INSEYATQWP 78 + P Sbjct: 116 HKCDLCADRP 125 >gi|269798297|ref|YP_003312197.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] gi|282850535|ref|ZP_06259914.1| ferredoxin [Veillonella parvula ATCC 17745] gi|294792160|ref|ZP_06757308.1| conserved domain protein [Veillonella sp. 6_1_27] gi|294794025|ref|ZP_06759162.1| conserved domain protein [Veillonella sp. 3_1_44] gi|269094926|gb|ACZ24917.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Veillonella parvula DSM 2008] gi|282580028|gb|EFB85432.1| ferredoxin [Veillonella parvula ATCC 17745] gi|294455595|gb|EFG23967.1| conserved domain protein [Veillonella sp. 3_1_44] gi|294457390|gb|EFG25752.1| conserved domain protein [Veillonella sp. 6_1_27] Length = 54 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C VCPV C EGE I D CIDCG CE CPV I + Sbjct: 3 VIADGCIKCG--SCASVCPVSCITEGETKYEIG-DACIDCGSCESVCPVSVISAE 54 >gi|325141137|gb|EGC63638.1| iron-sulfur cluster-binding protein [Neisseria meningitidis CU385] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDESACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|220916973|ref|YP_002492277.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954827|gb|ACL65211.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 731 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 YV T+ C+ C+ C CPV ++ E+ +CI C C CP + + Sbjct: 72 YVSTKRQCMHCEEPACAAACPVTALHKTESGAVAYDASKCIGCRYCMWACPFGVPTAEWD 131 >gi|197122197|ref|YP_002134148.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196172046|gb|ACG73019.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 731 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 YV T+ C+ C+ C CPV ++ E+ +CI C C CP + + Sbjct: 72 YVSTKRQCMHCEEPACAAACPVTALHKTESGAVAYDASKCIGCRYCMWACPFGVPTAEWD 131 >gi|78184657|ref|YP_377092.1| ferredoxin [Synechococcus sp. CC9902] gi|78168951|gb|ABB26048.1| ferredoxin [Synechococcus sp. CC9902] Length = 74 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +V+E C DCV+ CPV C +G +F I+ D CIDCG+C CPV Sbjct: 1 MAHTIVSEVCEGI--ADCVDACPVACIDQGSGKNSKGTDFYVINFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAILAEERPDLQK 72 >gi|33865811|ref|NP_897370.1| ferredoxin [Synechococcus sp. WH 8102] gi|33632981|emb|CAE07792.1| ferredoxin [Synechococcus sp. WH 8102] Length = 74 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +G+ +F I+ D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGI--ADCVDACPVACIDQGQGKNKKGTDFYWINFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAILAEERPDLQK 72 >gi|329998255|ref|ZP_08303009.1| dimethylsulfoxide reductase, chain B [Klebsiella sp. MS 92-3] gi|328538797|gb|EGF64875.1| dimethylsulfoxide reductase, chain B [Klebsiella sp. MS 92-3] Length = 191 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + + + Sbjct: 46 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAD 105 Query: 61 PGL 63 G Sbjct: 106 KGH 108 >gi|300922185|ref|ZP_07138322.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300421500|gb|EFK04811.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] Length = 218 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|293404203|ref|ZP_06648197.1| DmsB protein [Escherichia coli FVEC1412] gi|291428789|gb|EFF01814.1| DmsB protein [Escherichia coli FVEC1412] Length = 148 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A + + Sbjct: 3 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNET 62 Query: 61 PGL 63 G Sbjct: 63 KGH 65 >gi|114046018|ref|YP_736568.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113887460|gb|ABI41511.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 188 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHSDKCVGCMYCVAACPY 104 >gi|319411308|emb|CBY91719.1| putative ferredoxin [Neisseria meningitidis WUE 2594] gi|325130942|gb|EGC53669.1| iron-sulfur cluster-binding protein [Neisseria meningitidis OX99.30304] gi|325135016|gb|EGC57644.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M13399] gi|325137038|gb|EGC59634.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M0579] gi|325202960|gb|ADY98414.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240149] gi|325207242|gb|ADZ02694.1| iron-sulfur cluster-binding protein [Neisseria meningitidis NZ-05/33] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|308388428|gb|ADO30748.1| putative ferredoxin [Neisseria meningitidis alpha710] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|148244921|ref|YP_001219615.1| intracellular sulfur oxidation protein DsrO [Candidatus Vesicomyosocius okutanii HA] gi|146326748|dbj|BAF61891.1| intracellular sulfur oxidation protein DsrO [Candidatus Vesicomyosocius okutanii HA] Length = 243 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ CV+VCP + + E+ + + CI C C CP DA Sbjct: 109 CQHCEEPPCVDVCPTNASMKREDGIVLVDKHLCIGCRYCMMACPYDA 155 >gi|218767102|ref|YP_002341614.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|121051110|emb|CAM07381.1| putative ferredoxin [Neisseria meningitidis Z2491] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|120600350|ref|YP_964924.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560443|gb|ABM26370.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|319424953|gb|ADV53027.1| sulfur reductase, FeS subunit, PhsB [Shewanella putrefaciens 200] Length = 188 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHADKCVGCMYCVAACPY 104 >gi|331664038|ref|ZP_08364948.1| hydrogenase-4 component A [Escherichia coli TA143] gi|331059837|gb|EGI31814.1| hydrogenase-4 component A [Escherichia coli TA143] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|194432127|ref|ZP_03064416.1| hydrogenase-4 component A [Shigella dysenteriae 1012] gi|194419656|gb|EDX35736.1| hydrogenase-4 component A [Shigella dysenteriae 1012] gi|332087922|gb|EGI93047.1| hydrogenase-4 component A [Shigella boydii 5216-82] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|187730471|ref|YP_001881273.1| hydrogenase-4 component A [Shigella boydii CDC 3083-94] gi|187427463|gb|ACD06737.1| hydrogenase-4 component A [Shigella boydii CDC 3083-94] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|325203327|gb|ADY98780.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240355] Length = 279 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVIADECTGCGLCVAPCPVDCIH 125 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC + Sbjct: 101 MHTVIADECTGCGL--CVAPCPVDCIHM 126 >gi|114770214|ref|ZP_01447752.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] gi|114549051|gb|EAU51934.1| iron-sulfur cluster-binding protein [alpha proteobacterium HTCC2255] Length = 248 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGARELD 133 >gi|89896878|ref|YP_520365.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336326|dbj|BAE85921.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 231 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 YV T C C CV CP Y+ + L +H P++CI C C CP + I + + Sbjct: 53 YVPT-LCNHCDQAACVRACPTKAMYKDDKGLTLHNPNKCIGCKSCMLACPYEVINYNAKE 111 Query: 62 GLELW 66 W Sbjct: 112 PHGHW 116 >gi|116622139|ref|YP_824295.1| formate dehydrogenase subunit beta [Candidatus Solibacter usitatus Ellin6076] gi|116225301|gb|ABJ84010.1| formate dehydrogenase beta subunit [Candidatus Solibacter usitatus Ellin6076] Length = 286 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDTEPG 62 ++ C C C+E CP E + + + PD C CG C CP I PD Sbjct: 102 SDVCKHCARAGCLESCPTGAIIRTEFDSVYVQPDICNGCGYCVINCPFGVIDRSPDDGRA 161 Query: 63 LE 64 + Sbjct: 162 WK 163 >gi|332981828|ref|YP_004463269.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Mahella australiensis 50-1 BON] gi|332699506|gb|AEE96447.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Mahella australiensis 50-1 BON] Length = 597 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 YVV E C C C +CPV + I P++C CG C C DA+ Sbjct: 542 YVVMPELCRGCGL--CARMCPVGAITGAKKEPYVIDPEKCTKCGTCMDVCKFDAV 594 >gi|320183165|gb|EFW58023.1| Anaerobic dimethyl sulfoxide reductase chain B [Shigella flexneri CDC 796-83] gi|332097171|gb|EGJ02154.1| anaerobic dimethyl sulfoxide reductase chain B domain protein [Shigella boydii 3594-74] Length = 122 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ E+ F+ + D CI C C CP A+ Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGALNRPGN 119 Query: 61 PGL 63 PG Sbjct: 120 PGD 122 >gi|293405917|ref|ZP_06649909.1| hydrogenase-4 component A [Escherichia coli FVEC1412] gi|298381665|ref|ZP_06991264.1| hydrogenase-4 component A [Escherichia coli FVEC1302] gi|300897640|ref|ZP_07116044.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|291428125|gb|EFF01152.1| hydrogenase-4 component A [Escherichia coli FVEC1412] gi|298279107|gb|EFI20621.1| hydrogenase-4 component A [Escherichia coli FVEC1302] gi|300358616|gb|EFJ74486.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] Length = 218 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|254262256|emb|CAZ90582.1| Anaerobic dimethyl sulfoxide reductase chain B dmsB [Enterobacter helveticus] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ ++ F+ ++ + CI C C CP A + + + Sbjct: 60 AYYLSISCNHCADPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNAQ 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|226940402|ref|YP_002795476.1| tetrathionate reductase subunit B [Laribacter hongkongensis HLHK9] gi|226715329|gb|ACO74467.1| putative tetrathionate reductase subunit B [Laribacter hongkongensis HLHK9] Length = 239 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 TY++ C C + C+ VCPV F + + + + + C+ C C CP DA Sbjct: 88 TYMLPRLCNHCANPPCIPVCPVGATFQQADGTVVVDGERCVGCAYCVQACPYDA 141 >gi|209527856|ref|ZP_03276346.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrospira maxima CS-328] gi|209491713|gb|EDZ92078.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arthrospira maxima CS-328] Length = 75 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV CPV C + G ++ I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGV--ADCVGACPVACIHPGPGKNTKGTDWYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAIVAEERPELQQ 72 >gi|74313007|ref|YP_311426.1| hydrogenase 4 Fe-S subunit [Shigella sonnei Ss046] gi|301329002|ref|ZP_07222029.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|73856484|gb|AAZ89191.1| hydrogenase 4 Fe-S subunit [Shigella sonnei Ss046] gi|300844636|gb|EFK72396.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] Length = 218 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|167037871|ref|YP_001665449.1| Fe-S cluster domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116288|ref|YP_004186447.1| Fe-S cluster domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856705|gb|ABY95113.1| Fe-S cluster domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929379|gb|ADV80064.1| Fe-S cluster domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 435 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYV--VT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M+Y VT + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 1 MSYFHSVTLDKDRCRGC--TNCIKRCPTEAIRVRDGKARIINERCIDCGECIRVCPYHA 57 >gi|325473842|gb|EGC77030.1| Fe-hydrogenase large subunit family protein [Treponema denticola F0402] Length = 500 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++T C C C+ CP I ++CI+CG+C CP A+ Sbjct: 120 YMITNACQACVARPCMMNCPKTAIAISGGRSRIDEEKCINCGICLKNCPYHAV 172 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 15/63 (23%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E CI C C E CPV + EN I +CI CG C ECP Sbjct: 155 EKCINCGICLKNCPYHAVIKIPVPCEEACPVGAISKDENGKERIDYHKCIFCGNCMRECP 214 Query: 52 VDA 54 A Sbjct: 215 FGA 217 >gi|311279455|ref|YP_003941686.1| tetrathionate reductase subunit B [Enterobacter cloacae SCF1] gi|308748650|gb|ADO48402.1| tetrathionate reductase subunit B [Enterobacter cloacae SCF1] Length = 249 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + I C+ C C CP DA I DT+ + Sbjct: 100 CNHCDSPPCVPVCPVQATFQRKDGIVVIDNTRCVGCAYCVQACPYDARFINHDTQTADK 158 >gi|296127647|ref|YP_003634899.1| Ferredoxin hydrogenase [Brachyspira murdochii DSM 12563] gi|296019463|gb|ADG72700.1| Ferredoxin hydrogenase [Brachyspira murdochii DSM 12563] Length = 490 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++VT C C C+ CP D E I +CI+CG+C CP AI Sbjct: 112 FMVTNACQACLARPCLVNCPKDAITILDEKRAHIDSSKCINCGLCLKNCPYHAI 165 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 20/93 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVC 46 ++ + CI C C E CPV + E I +CI CG C Sbjct: 143 AHIDSSKCINCGLCLKNCPYHAIIYIPVPCEESCPVGAINKNEQGKEVIDYHKCIFCGNC 202 Query: 47 EPECPVDAIKP-----DTEPGLELWLKINSEYA 74 ECP A+ D L+ K+N YA Sbjct: 203 MRECPFSAMMDKGQLVDVLKHLKEDKKVNVMYA 235 >gi|189467142|ref|ZP_03015927.1| hypothetical protein BACINT_03526 [Bacteroides intestinalis DSM 17393] gi|189435406|gb|EDV04391.1| hypothetical protein BACINT_03526 [Bacteroides intestinalis DSM 17393] Length = 635 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E CI C C + CP D I+PD+CI CG+C C AI Sbjct: 578 LTYTINPELCIGC--HLCFKHCPADAILGDVRKPHVINPDKCIKCGMCMARCKFKAI 632 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 15/31 (48%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P+ CI C +C CP DAI D Sbjct: 580 YTINPELCIGCHLCFKHCPADAILGDVRKPH 610 >gi|89893295|ref|YP_516782.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89332743|dbj|BAE82338.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 201 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCPV ++ E + + PD+CI C C CP DA + E G+ Sbjct: 63 CNQCQDAPCQTVCPVKATHKDEGGVIVVDPDKCIGCRYCIAACPYDARFLNKETGMAE 120 >gi|228470307|ref|ZP_04055211.1| Fe-hydrogenase large subunit family protein [Porphyromonas uenonis 60-3] gi|228308050|gb|EEK16925.1| Fe-hydrogenase large subunit family protein [Porphyromonas uenonis 60-3] Length = 492 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP C ++ I D CI CG C CP AI Sbjct: 108 YEVSNLCRGCVSRACSSNCPKSCISFQKNGQAQIDHDVCISCGQCHKNCPYHAIVY 163 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+ + I +CI CG C CP Sbjct: 144 DVCISCGQCHKNCPYHAIVYIPVPCEESCPVGAISKDEDGIEHIDESKCIYCGSCLNACP 203 Query: 52 VDAIKP 57 AI Sbjct: 204 FGAIFE 209 >gi|323141624|ref|ZP_08076506.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413889|gb|EFY04726.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 459 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELW 66 C C CV++CP + I D CIDCG C CP A +K DT GL + Sbjct: 19 CQGC--VSCVKLCPTEAIRVRNGKAEILGDRCIDCGACAAGCPYHAFNVKTDTLEGLADY 76 >gi|307323188|ref|ZP_07602398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] gi|306890677|gb|EFN21653.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces violaceusniger Tu 4113] Length = 341 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C C H C++VCP + E + + D C CG C P CP I D P Sbjct: 150 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQDDICNGCGYCVPACPYGVI--DVRPED 206 >gi|257437704|ref|ZP_05613459.1| conserved domain protein [Faecalibacterium prausnitzii A2-165] gi|257200011|gb|EEU98295.1| conserved domain protein [Faecalibacterium prausnitzii A2-165] Length = 56 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV ++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCG--ACEGACPVGAVTIENGVAVVNADACIDCGACEGACPTGAIAAE 56 >gi|159043786|ref|YP_001532580.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911546|gb|ABV92979.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dinoroseobacter shibae DFL 12] Length = 248 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGAREMDAAAG 137 >gi|325262543|ref|ZP_08129280.1| protein HymB [Clostridium sp. D5] gi|324032375|gb|EGB93653.1| protein HymB [Clostridium sp. D5] Length = 628 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++++ E C C + C CPV + + I ++CI CG CE C AI + Sbjct: 572 FIISAERCKGC--SKCARNCPVGAISGQIKEPYVIDNEKCIKCGACESACAFGAIHIE 627 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 13/53 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV + C+ +C + I + C C C CPV AI Sbjct: 555 HVVEKKCVS---HNCTAM----------RQFIISAERCKGCSKCARNCPVGAI 594 >gi|323170257|gb|EFZ55910.1| hydrogenase-4 component A [Escherichia coli LT-68] Length = 200 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 46 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 92 >gi|266623462|ref|ZP_06116397.1| putative 4Fe-4S binding domain protein [Clostridium hathewayi DSM 13479] gi|288864757|gb|EFC97055.1| putative 4Fe-4S binding domain protein [Clostridium hathewayi DSM 13479] Length = 203 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T++CI C C E CP C G I C+ CG+C+ CPV A+ Sbjct: 149 YFITDDCIGCGQ--CTESCPQKCIAPGVP-CRIDGSHCLRCGLCQEVCPVGAV 198 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 11/27 (40%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 D+CI CG C CP I P Sbjct: 149 YFITDDCIGCGQCTESCPQKCIAPGVP 175 >gi|86158509|ref|YP_465294.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85775020|gb|ABC81857.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 731 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 YV T+ C+ C+ C CPV ++ E+ +CI C C CP + + Sbjct: 72 YVSTKRQCMHCEEPACAAACPVTALHKTESGAVAYDASKCIGCRYCMWACPFGVPTAEWD 131 >gi|333002267|gb|EGK21831.1| hydrogenase-4 component A [Shigella flexneri K-272] gi|333016088|gb|EGK35420.1| hydrogenase-4 component A [Shigella flexneri K-227] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|323967925|gb|EGB63337.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327252131|gb|EGE63803.1| hydrogenase-4 component A [Escherichia coli STEC_7v] Length = 205 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|300957169|ref|ZP_07169404.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300316013|gb|EFJ65797.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] Length = 213 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|300728139|ref|ZP_07061510.1| nitroreductase family protein [Prevotella bryantii B14] gi|299774565|gb|EFI71186.1| nitroreductase family protein [Prevotella bryantii B14] Length = 269 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFL---AIHPDECIDCGVCEPECPVDAIKP 57 T+ CI+C C +VCP F + E P+ CIDCG C CP +I+ Sbjct: 8 TDTCIMCG--KCTQVCPPHIFMQREKKTPIRVFKPERCIDCGHCVDVCPTHSIEH 60 Score = 34.0 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 10/17 (58%) Query: 35 IHPDECIDCGVCEPECP 51 I+ D CI CG C CP Sbjct: 6 INTDTCIMCGKCTQVCP 22 >gi|292670527|ref|ZP_06603953.1| formate dehydrogenase beta subunit [Selenomonas noxia ATCC 43541] gi|292647937|gb|EFF65909.1| formate dehydrogenase beta subunit [Selenomonas noxia ATCC 43541] Length = 273 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 NC C C + CP + EN + I+ D+C+ C CE CP K D Sbjct: 76 NCFHCGDPACAKGCPENAIDRNENGTVVINQDKCVGCHYCEHNCPWHIPKIDD 128 >gi|146291718|ref|YP_001182142.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563408|gb|ABP74343.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 188 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHADKCVGCMYCVAACPY 104 >gi|284161789|ref|YP_003400412.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284011786|gb|ADB57739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 185 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + C+ C CV+VCP+ Y+ E+ + + D CI CG C CP A + Sbjct: 52 IPLMCLHCNDPLCVKVCPMKAVYKREDGIVLVDKDRCIGCGYCAFACPFGAPQFPE 107 >gi|253999507|ref|YP_003051570.1| RnfABCDGE type electron transport complex subunit B [Methylovorus sp. SIP3-4] gi|253986186|gb|ACT51043.1| electron transport complex, RnfABCDGE type, B subunit [Methylovorus sp. SIP3-4] Length = 299 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 113 AFIDEQTCIGC--TLCIQACPVDAILGASKQMHTVIADECTGCELCIAPCPVDCITMQPP 170 Query: 61 P 61 P Sbjct: 171 P 171 Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C+ C+ CPVDC Sbjct: 142 MHTVIADECTGCEL--CIAPCPVDCITM 167 >gi|256826506|ref|YP_003150465.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582649|gb|ACU93783.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 206 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 Y V+ +C C + C VCP ++ ++++ D+CI CG C CP +A K D Sbjct: 61 YHVSVSCNHCDNPACTGVCPTGAMHKNPETGLVSVNTDKCIGCGYCHMACPYNAPKVD 118 >gi|333001614|gb|EGK21182.1| hydrogenase-4 component A [Shigella flexneri VA-6] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|323977341|gb|EGB72427.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|320176273|gb|EFW51334.1| Hydrogenase-4 component A [Shigella dysenteriae CDC 74-1112] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|324118175|gb|EGC12072.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|222099662|ref|YP_002534230.1| NADH dehydrogenase [Thermotoga neapolitana DSM 4359] gi|221572052|gb|ACM22864.1| NADH dehydrogenase [Thermotoga neapolitana DSM 4359] Length = 610 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 +YV+ E C+ C T C VCPV C I EC+ CG C C AI T Sbjct: 543 SYVIDPEKCVGC--TACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVT 600 Query: 60 EP 61 Sbjct: 601 PA 602 >gi|281358774|ref|ZP_06245249.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] gi|281314729|gb|EFA98767.1| putative PAS/PAC sensor protein [Victivallis vadensis ATCC BAA-548] Length = 582 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C C CV CPV + A+ P+ C+ CG C CPV A Sbjct: 8 YTIEAECQDC--YKCVRHCPVKAIRVRDGHAAVIPELCVACGKCVEVCPVKA 57 >gi|16303247|dbj|BAB70482.1| pyruvate:ferredoxin oxidoreductase delta subunit [Sulfolobus solfataricus] Length = 363 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 12/80 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV--------DAIKP 57 + CI CK C CP +CF + I D C+ CG+C CPV +++ Sbjct: 268 DTCIECKL--CWVYCPDECFDGTPDGYYDIAYDYCVGCGICAEVCPVKDCIVMVDESMFT 325 Query: 58 DTEPGLELWLKINSEYATQW 77 D E+W + ++Y +W Sbjct: 326 DYRRPYEMWKEDKAKY-KEW 344 >gi|188495190|ref|ZP_03002460.1| hydrogenase-4 component A [Escherichia coli 53638] gi|188490389|gb|EDU65492.1| hydrogenase-4 component A [Escherichia coli 53638] Length = 200 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|240015030|ref|ZP_04721943.1| putative ferredoxin [Neisseria gonorrhoeae DGI18] gi|240081619|ref|ZP_04726162.1| putative ferredoxin [Neisseria gonorrhoeae FA19] gi|240113900|ref|ZP_04728390.1| putative ferredoxin [Neisseria gonorrhoeae MS11] gi|240116632|ref|ZP_04730694.1| putative ferredoxin [Neisseria gonorrhoeae PID18] gi|240118855|ref|ZP_04732917.1| putative ferredoxin [Neisseria gonorrhoeae PID1] gi|240122098|ref|ZP_04735060.1| putative ferredoxin [Neisseria gonorrhoeae PID24-1] gi|240124392|ref|ZP_04737348.1| putative ferredoxin [Neisseria gonorrhoeae PID332] gi|240124736|ref|ZP_04737622.1| putative ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|240129069|ref|ZP_04741730.1| putative ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|254494652|ref|ZP_05107823.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|260439607|ref|ZP_05793423.1| putative ferredoxin [Neisseria gonorrhoeae DGI2] gi|268597712|ref|ZP_06131879.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268599961|ref|ZP_06134128.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268602297|ref|ZP_06136464.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268604560|ref|ZP_06138727.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268683016|ref|ZP_06149878.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268683315|ref|ZP_06150177.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268687445|ref|ZP_06154307.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291042849|ref|ZP_06568590.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513692|gb|EEH63037.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|268551500|gb|EEZ46519.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268584092|gb|EEZ48768.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268586428|gb|EEZ51104.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268588691|gb|EEZ53367.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268623300|gb|EEZ55700.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268623599|gb|EEZ55999.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268627729|gb|EEZ60129.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291013283|gb|EFE05249.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 279 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVITDECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+T+ C C CV CPVDC + Sbjct: 101 MHTVITDECTGCGL--CVAPCPVDCIHM 126 >gi|126664787|ref|ZP_01735771.1| iron-sulfur cluster-binding protein [Marinobacter sp. ELB17] gi|126631113|gb|EBA01727.1| iron-sulfur cluster-binding protein [Marinobacter sp. ELB17] Length = 659 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Query: 6 TENCILCKH-----TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T C + T C++VCP + + + + I+ D C CG C CP A+ + Sbjct: 278 TSLCAHSRANQPGCTRCLDVCPTEAIFSAGDHVEINSDICAGCGSCAAVCPTSAVTMNET 337 Query: 61 P 61 P Sbjct: 338 P 338 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 ++ C LC CV +CP + + + + C+ CGVCE CP AI Sbjct: 512 SDKCTLCL--ACVSLCPTGALGDHPDRPEVQFTENACVQCGVCESTCPETAI 561 Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 + I+ D+C C C CP A+ + + + N+ Sbjct: 508 IEINSDKCTLCLACVSLCPTGALGDHPDRPEVQFTE-NA 545 >gi|317484980|ref|ZP_07943864.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] gi|316923785|gb|EFV44987.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] Length = 622 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 6 TENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C CV+ CP F + ++I P +CI C VC CP +AI+P Sbjct: 571 GERCVNC--HTCVDTFGCP--AFQLRDGKVSIDPVQCIGCAVCAQVCPNNAIRP 620 >gi|153003957|ref|YP_001378282.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027530|gb|ABS25298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 100 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 9/85 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C CP +GE+ I P+ C +C C+ CPVD Sbjct: 1 MATKITDECINCG--ACEPECPNSAITQGEDIYVIDPNLCTECVGFHGEEACQAVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPN 79 PD E G + + + AT P+ Sbjct: 59 CIPDEEKGETEEV-LYARLATIHPD 82 >gi|15832637|ref|NP_311410.1| anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. Sakai] gi|168748420|ref|ZP_02773442.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4113] gi|168756293|ref|ZP_02781300.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4401] gi|168761131|ref|ZP_02786138.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4501] gi|168768613|ref|ZP_02793620.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4486] gi|168773565|ref|ZP_02798572.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4196] gi|168778487|ref|ZP_02803494.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4076] gi|168787867|ref|ZP_02812874.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC869] gi|168798892|ref|ZP_02823899.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC508] gi|195936663|ref|ZP_03082045.1| putative anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC4024] gi|208806169|ref|ZP_03248506.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4206] gi|208813124|ref|ZP_03254453.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4045] gi|208821767|ref|ZP_03262087.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4042] gi|209397819|ref|YP_002271991.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4115] gi|217327591|ref|ZP_03443674.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. TW14588] gi|254794467|ref|YP_003079304.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|261223047|ref|ZP_05937328.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. FRIK2000] gi|261259402|ref|ZP_05951935.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. FRIK966] gi|291283742|ref|YP_003500560.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. CB9615] gi|293415785|ref|ZP_06658428.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|331653949|ref|ZP_08354950.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] gi|13362853|dbj|BAB36806.1| putative anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. Sakai] gi|187770599|gb|EDU34443.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4196] gi|188017042|gb|EDU55164.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4113] gi|189003152|gb|EDU72138.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4076] gi|189356621|gb|EDU75040.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4401] gi|189362214|gb|EDU80633.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4486] gi|189368397|gb|EDU86813.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4501] gi|189372381|gb|EDU90797.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC869] gi|189378639|gb|EDU97055.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC508] gi|208725970|gb|EDZ75571.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4206] gi|208734401|gb|EDZ83088.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4045] gi|208741890|gb|EDZ89572.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4042] gi|209159219|gb|ACI36652.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. EC4115] gi|217319958|gb|EEC28383.1| dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. TW14588] gi|254593867|gb|ACT73228.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. TW14359] gi|290763615|gb|ADD57576.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. CB9615] gi|291433433|gb|EFF06412.1| anaerobic dimethyl sulfoxide reductase subunit B [Escherichia coli B185] gi|320188854|gb|EFW63513.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. EC1212] gi|320646308|gb|EFX15235.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H- str. 493-89] gi|320651813|gb|EFX20193.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H- str. H 2687] gi|320657199|gb|EFX25008.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662805|gb|EFX30137.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O55:H7 str. USDA 5905] gi|320667609|gb|EFX34524.1| Dimethylsulfoxide reductase, chain B [Escherichia coli O157:H7 str. LSU-61] gi|326340319|gb|EGD64123.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1125] gi|326345003|gb|EGD68747.1| Anaerobic dimethyl sulfoxide reductase chain B [Escherichia coli O157:H7 str. 1044] gi|331048798|gb|EGI20874.1| dimethylsulfoxide reductase, chain B [Escherichia coli M718] Length = 209 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + ++ D+C+ CG C CP A + + Sbjct: 71 AYTLSVSCNHCADPICTKNCPTMAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|219667265|ref|YP_002457700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537525|gb|ACL19264.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 193 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C++ CVEVCPV Y+ E+ + + +CI CG C CP +A Sbjct: 64 CNHCENAPCVEVCPVKASYKREDGMVLLDKKKCIGCGYCVASCPYNA 110 >gi|238895928|ref|YP_002920664.1| putative oxidoreductase Fe-S binding subunit [Klebsiella pneumoniae NTUH-K2044] gi|238548246|dbj|BAH64597.1| putative oxidoreductase Fe-S subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 660 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV CP D + + + + ++CI C C CP Sbjct: 56 CRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFG 100 >gi|126656100|ref|ZP_01727484.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] gi|126622380|gb|EAZ93086.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] Length = 75 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTKTCEGI--ADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAILPEERPDLQK 72 >gi|157164645|ref|YP_001466166.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Campylobacter concisus 13826] gi|112800391|gb|EAT97735.1| electron transport protein HydN [Campylobacter concisus 13826] Length = 189 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ C C C VCP +N + +H + CI C +C CP AI E Sbjct: 48 VMPTQCRQCDDGPCANVCPTGALRFNDNCIELHEEICIGCKMCTIACPYGAISSSAE 104 >gi|118581916|ref|YP_903166.1| NADH dehydrogenase (quinone) [Pelobacter propionicus DSM 2379] gi|118504626|gb|ABL01109.1| NADH dehydrogenase subunit F [Pelobacter propionicus DSM 2379] Length = 488 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 ++ E+C+ C T C VCPV+C + I CI CG C C AI Sbjct: 435 ILAESCVGC--TLCSRVCPVNCISGTVKGVHVIDQAACIKCGACIDACKFQAI 485 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 + I + C+ C +C CPV+ I Sbjct: 433 IVILAESCVGCTLCSRVCPVNCI 455 >gi|329964944|ref|ZP_08301952.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] gi|328524585|gb|EGF51653.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] Length = 486 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I D CI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQTNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAIVY 171 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECP 51 + CI C C E CPV + + I ++CI CG C CP Sbjct: 152 DACISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDAKGIEHIDENKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|188586889|ref|YP_001918434.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351576|gb|ACB85846.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 226 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTD-CVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 ++ E CI C+ C EVCP + I DEC+ CG C CP + I D Sbjct: 120 IIPETCIQCEEPVMCAEVCPQNAIGSHPETGARVIDEDECVGCGECVDACPWEMIAMD 177 >gi|294637161|ref|ZP_06715469.1| hydrogenase-2 operon protein HybA [Edwardsiella tarda ATCC 23685] gi|291089625|gb|EFE22186.1| hydrogenase-2 operon protein HybA [Edwardsiella tarda ATCC 23685] Length = 327 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + PD C C C CP D K D + Sbjct: 109 IKKQCMHCVDPNCVSVCPVSALKKHPVTGIVMYDPDVCTGCRYCMVACPFDVPKYDYD 166 >gi|20093899|ref|NP_613746.1| ferredoxin [Methanopyrus kandleri AV19] gi|19886840|gb|AAM01676.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 379 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C C +VCPVD E I PD C+ CG+C CP A+ Sbjct: 236 YIQPDMCIGC--RICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAV 288 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 11/62 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---------GENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C +CV CP + + I PD CI C +C CPVDAI+ Sbjct: 202 ERCLGC--YNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPDMCIGCRICYDVCPVDAIRI 259 Query: 58 DT 59 + Sbjct: 260 EE 261 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 3/93 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL- 67 C C++ C+EVCP E I D C C C CP ++ + E Sbjct: 108 CDRCENRPCIEVCPTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEVPQLKRRS 167 Query: 68 --KINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 ++N E + + + DG Sbjct: 168 NPRLNRELCVECNRCHEVCPTGAADNVPDGDPD 200 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 + C C C EVCP E + + + D C+ C C CP Sbjct: 27 DECAGCGL--CAEVCPTGAI-EVDERVRLDEDRCVACSFCVQACP 68 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 PDEC CG+C CP AI+ D L+ Sbjct: 26 PDECAGCGLCAEVCPTGAIEVDERVRLDE 54 Score = 37.4 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEP 61 E C+ C C EVCP + P+ C+ C C CP +A+K PD P Sbjct: 174 ELCVECN--RCHEVCPTGAADNVPDGDP-DPERCLGCYNCVAYCPTEALKRPDHRP 226 >gi|323702855|ref|ZP_08114514.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532243|gb|EGB22123.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 571 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA-IKPD 58 M + T ++C C CV CPV + I + C+ CG C C + A I D Sbjct: 1 MALISTNQDCRKC--YACVRACPVKTISISDGIPEIIEEGCLGCGQCVLACSIGAKIVHD 58 Query: 59 TEPGLELWL 67 P ++ W+ Sbjct: 59 DTPKVQRWI 67 >gi|218705980|ref|YP_002413499.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli UMN026] gi|218433077|emb|CAR13972.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli UMN026] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|94448907|emb|CAJ44288.1| NADH dehydrogenase (ubiquinone) [Heliobacillus mobilis] Length = 846 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C C CV+VCPV AI CI CG C +CPV I + E Sbjct: 791 GEKCRRCGL--CVKVCPVKAISGEIRKTPFAIDAKLCIACGACAQKCPVHVIAQEGE 845 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 4/49 (8%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 K C VCP + + I ++C CG+C CPV AI + Sbjct: 767 HIKEKRCPAGVCPA---LKPKGKYRIDGEKCRRCGLCVKVCPVKAISGE 812 >gi|193064781|ref|ZP_03045859.1| hydrogenase-4 component A [Escherichia coli E22] gi|194427266|ref|ZP_03059816.1| hydrogenase-4 component A [Escherichia coli B171] gi|218555007|ref|YP_002387920.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI1] gi|260845115|ref|YP_003222893.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O103:H2 str. 12009] gi|260856576|ref|YP_003230467.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O26:H11 str. 11368] gi|260869171|ref|YP_003235573.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O111:H- str. 11128] gi|307312525|ref|ZP_07592158.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|192927664|gb|EDV82280.1| hydrogenase-4 component A [Escherichia coli E22] gi|194414587|gb|EDX30859.1| hydrogenase-4 component A [Escherichia coli B171] gi|218361775|emb|CAQ99372.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli IAI1] gi|257755225|dbj|BAI26727.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O26:H11 str. 11368] gi|257760262|dbj|BAI31759.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O103:H2 str. 12009] gi|257765527|dbj|BAI37022.1| hydrogenase 4, 4Fe-4S subunit [Escherichia coli O111:H- str. 11128] gi|306907448|gb|EFN37952.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|315061800|gb|ADT76127.1| hydrogenase 4, membrane subunit [Escherichia coli W] gi|323156083|gb|EFZ42242.1| hydrogenase-4 component A [Escherichia coli EPECa14] gi|323159332|gb|EFZ45317.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323177399|gb|EFZ62987.1| hydrogenase-4 component A [Escherichia coli 1180] gi|323377619|gb|ADX49887.1| hydrogenase 4 Fe-S subunit [Escherichia coli KO11] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|323184464|gb|EFZ69839.1| hydrogenase-4 component A [Escherichia coli 1357] Length = 205 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VCPV+ + ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 97 >gi|238928196|ref|ZP_04659956.1| formate dehydrogenase beta subunit [Selenomonas flueggei ATCC 43531] gi|238884156|gb|EEQ47794.1| formate dehydrogenase beta subunit [Selenomonas flueggei ATCC 43531] Length = 271 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 NC C C + CP + EN + I+ D+C+ C CE CP K D Sbjct: 76 NCFHCGDPACAKGCPENAIDRNENGTVVINQDKCVGCHYCEHNCPWHIPKIDD 128 >gi|119489835|ref|ZP_01622590.1| Transcriptional Regulator, XRE family protein [Lyngbya sp. PCC 8106] gi|119454263|gb|EAW35414.1| Transcriptional Regulator, XRE family protein [Lyngbya sp. PCC 8106] Length = 532 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M Y + ENC C C CP E E L I P C C G C +CP+ Sbjct: 1 MPYSIPENCSGCG--TCKPNCPTGAIQEVEGQLWIDPALCNHCEGYYSEPQCVVQCPISC 58 Query: 55 IKPDTE 60 P Sbjct: 59 PVPSQP 64 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 P+ C CG C+P CP AI+ E +LW+ Sbjct: 1 MPYSIPENCSGCGTCKPNCPTGAIQ---EVEGQLWID 34 >gi|262042086|ref|ZP_06015262.1| glutamate synthase subunit small chain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330013592|ref|ZP_08307680.1| putative oxidoreductase Fe-S binding subunit [Klebsiella sp. MS 92-3] gi|259040567|gb|EEW41662.1| glutamate synthase subunit small chain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328533471|gb|EGF60204.1| putative oxidoreductase Fe-S binding subunit [Klebsiella sp. MS 92-3] Length = 660 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV CP D + + + + ++CI C C CP Sbjct: 56 CRHCEDAPCVRSCPNDAIAQSGDSVQVRQEKCIGCKSCMVACPFG 100 >gi|297619793|ref|YP_003707898.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378770|gb|ADI36925.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 395 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ VTE CI C+ CVEVCP D Y E+ + P+ C C +CE CPVDAI + E Sbjct: 192 SFTVTEECIGCE--KCVEVCPGDMITYNAEDLIVKLPEACPACHLCEQNCPVDAISLEVE 249 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ C ++CV VCPVD I D+CI C VC CP +AI Sbjct: 128 VTDACVGC--SECVPVCPVDAISIENELAVIDTDKCIYCTVCAQTCPWNAIY 177 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C LC C CP E L + +C+ CG C CP Sbjct: 34 CNLC--FSCASACPTGALVENNGKLIYNSSKCLKCGNCATACPTG 76 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCF-----YEGENFLAIHP-------DECIDCGVCEPECPVDAIK 56 C+LC+ CV+ CP+D + P D C+ C C P CPVDAI Sbjct: 91 CVLCE--KCVDACPIDIISIPGKIDKPEKEIAIPQEPIKVTDACVGCSECVPVCPVDAIS 148 Query: 57 PDTE 60 + E Sbjct: 149 IENE 152 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 10/51 (19%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECP 51 CI C CV CP G+ N + P C CG C CP Sbjct: 308 CIRCG--ACVMKCPTGALKMGKITHEGKEYNRIEFSPALCNQCGECVDVCP 356 >gi|326392042|ref|ZP_08213536.1| Fe-S cluster domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325991921|gb|EGD50419.1| Fe-S cluster domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 437 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYV--VT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M+Y VT + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 1 MSYFHSVTLDKDRCRGC--TNCIKRCPTEAIRVRDGKARIINERCIDCGECIRVCPYHA 57 >gi|296125226|ref|YP_003632478.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] gi|296017042|gb|ADG70279.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brachyspira murdochii DSM 12563] Length = 55 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M V+ +C+ C C C D EG + I PD+C DCG CEP CP +AI Sbjct: 1 MPRVINNDCVACG--SCKPECAFDAISEG-DIYVIDPDKCTDCGACEPVCPSNAIHQ 54 >gi|13474673|ref|NP_106242.1| DMSO reductase chain B [Mesorhizobium loti MAFF303099] gi|14025428|dbj|BAB52028.1| DMSO reductase chain B [Mesorhizobium loti MAFF303099] Length = 244 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + + + I D+CI C +C CP A + DT+ G Sbjct: 80 SCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVG 136 >gi|327309969|ref|YP_004336866.1| sulfur reductase subunit B [Thermoproteus uzoniensis 768-20] gi|326946448|gb|AEA11554.1| sulfur reductase, subunit B [Thermoproteus uzoniensis 768-20] Length = 266 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ V +C C++ C VCP ++ + + I+ D CI C CE CP I D Sbjct: 70 TFSVPISCFHCRNPACTTVCPTGAIFKRKEDGVVVINYDVCIGCRYCENACPYGNITFDP 129 Query: 60 EPGLELW--LKINSEYATQWP 78 G+ L I+ Y P Sbjct: 130 VEGVSKKCTLAIDRIYDESLP 150 >gi|326791483|ref|YP_004309304.1| Fe-S cluster domain protein [Clostridium lentocellum DSM 5427] gi|326542247|gb|ADZ84106.1| Fe-S cluster domain protein [Clostridium lentocellum DSM 5427] Length = 463 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 2 TYVVT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T+ VT E CI C TDC++ CP + + I + CIDCG C C A Sbjct: 3 THSVTIEKEKCIGC--TDCIKRCPTEAIRVRGSKAEIIEERCIDCGNCIRICRNGA 56 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I ++CI C C CP +AI+ Sbjct: 8 IEKEKCIGCTDCIKRCPTEAIR 29 >gi|156934229|ref|YP_001438145.1| electron transport protein HydN [Cronobacter sakazakii ATCC BAA-894] gi|156532483|gb|ABU77309.1| hypothetical protein ESA_02059 [Cronobacter sakazakii ATCC BAA-894] Length = 182 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ P Sbjct: 59 CRQCEDAPCASVCPNGAITRDNDFVHVHQQRCIGCKTCVVACPYGAMEVVVRP 111 >gi|117618565|ref|YP_857778.1| tetrathionate reductase, subunit B [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559972|gb|ABK36920.1| tetrathionate reductase, subunit B [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 262 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C C++VCP F + + ++ D C+ CG C CP DA Sbjct: 109 CNHCAEPACLDVCPTGATFQRDDGIVVVNNDWCVGCGYCVQACPYDA 155 >gi|332702846|ref|ZP_08422934.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552995|gb|EGJ50039.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 337 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V TE+C C C E CP ++ + +C+ CGVC C A+ + EP Sbjct: 265 VETEHCAGCG--ACTEACPFGAMGIRDDHAWVDEKQCMGCGVCLTRCDHQALHLEREPSR 322 Query: 64 ELWLKINSEYATQWP 78 L+I + + P Sbjct: 323 GDPLEIEALLNAKSP 337 >gi|270297045|ref|ZP_06203244.1| NADH:ubiquinone oxidoreductase [Bacteroides sp. D20] gi|270273032|gb|EFA18895.1| NADH:ubiquinone oxidoreductase [Bacteroides sp. D20] Length = 635 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E CI C C + CP D I+PD+CI CG+C C AI Sbjct: 578 LTYTINPELCIGC--HLCFKHCPADAILGDVRKPHVINPDKCIKCGMCMARCKFKAI 632 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 15/31 (48%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P+ CI C +C CP DAI D Sbjct: 580 YTINPELCIGCHLCFKHCPADAILGDVRKPH 610 >gi|150401707|ref|YP_001325473.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014410|gb|ABR56861.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 173 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 C C C EVCPVD Y ++ + + ++CI CG+C CP AI Sbjct: 44 CQHCASAPCKEVCPVDAIYHLDDGTVYLDEEKCIGCGLCPMACPFGAI 91 >gi|126725238|ref|ZP_01741081.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706402|gb|EBA05492.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium HTCC2150] Length = 249 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 81 SCLHCDDAPCVTVCPTGASYKRAEDGIVLVNEDACIGCGLCAWACPYGAREMDQAEG 137 >gi|154174684|ref|YP_001407618.1| electron transport protein HydN [Campylobacter curvus 525.92] gi|112802520|gb|EAT99864.1| electron transport protein HydN [Campylobacter curvus 525.92] Length = 189 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C VCP +N + +H + CI C +C CP AI E Sbjct: 53 CRQCDDGPCANVCPTGALRFDDNCIELHEEICIGCKMCTIACPYGAISSSAE 104 >gi|59802094|ref|YP_208806.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|194099985|ref|YP_002003124.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|239997992|ref|ZP_04717916.1| putative ferredoxin [Neisseria gonorrhoeae 35/02] gi|240017478|ref|ZP_04724018.1| putative ferredoxin [Neisseria gonorrhoeae FA6140] gi|268593845|ref|ZP_06128012.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|293398133|ref|ZP_06642338.1| electron transport complex protein RnfB [Neisseria gonorrhoeae F62] gi|59718989|gb|AAW90394.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|193935275|gb|ACF31099.1| putative ferredoxin [Neisseria gonorrhoeae NCCP11945] gi|268547234|gb|EEZ42652.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|291611396|gb|EFF40466.1| electron transport complex protein RnfB [Neisseria gonorrhoeae F62] gi|317165435|gb|ADV08976.1| putative ferredoxin [Neisseria gonorrhoeae TCDC-NG08107] Length = 279 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CP D + + DEC CG+C CPVD I Sbjct: 78 ACIGC--TACIRACPADAIMGAGKLMHTVITDECTGCGLCVAPCPVDCIH 125 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CP DAI Sbjct: 74 IDETACIGCTACIRACPADAI 94 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+T+ C C CV CPVDC + Sbjct: 101 MHTVITDECTGCGL--CVAPCPVDCIHM 126 >gi|307353080|ref|YP_003894131.1| FAD dependent oxidoreductase [Methanoplanus petrolearius DSM 11571] gi|307156313|gb|ADN35693.1| FAD dependent oxidoreductase [Methanoplanus petrolearius DSM 11571] Length = 428 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 20/83 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 YV E C C C EVCPV+ + N P+ CIDCG Sbjct: 98 YVDAELCNGCGD--CYEVCPVEVYNRYDAGLGVRKAIYKPHAQIVPNLAIRDPEHCIDCG 155 Query: 45 VCEPECPVDAIKPDTEPGLELWL 67 +C C +A++ D E E + Sbjct: 156 LCYDVCGREAVRHDDEDSEEEFT 178 >gi|304437604|ref|ZP_07397559.1| formate dehydrogenase-O, beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369417|gb|EFM23087.1| formate dehydrogenase-O, beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 271 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 NC C C + CP + EN + I+ D+C+ C CE CP K D Sbjct: 76 NCFHCGDPACAKGCPENAIDRNENGTVVINQDKCVGCHYCEHNCPWHIPKIDD 128 >gi|237653652|ref|YP_002889966.1| electron transport complex, RnfABCDGE type subunit beta [Thauera sp. MZ1T] gi|237624899|gb|ACR01589.1| electron transport complex, RnfABCDGE type, B subunit [Thauera sp. MZ1T] Length = 179 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 + V T+ CI C + C++ CP D L + + CI CG C CP I + Sbjct: 104 LARVRTDACIGC--SRCIKSCPTDAILGATKQLHVVLEEACIGCGACAEVCPTGGIDLE 160 >gi|221633945|ref|YP_002523171.1| putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit [Thermomicrobium roseum DSM 5159] gi|221157195|gb|ACM06322.1| putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit [Thermomicrobium roseum DSM 5159] Length = 282 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVD 53 ++ C C H C+E CP E + + I D C CG C P CP Sbjct: 96 SDVCKHCVHAGCMEACPTGAIIRTEFDTVVIQQDICNGCGYCVPACPFG 144 >gi|328951758|ref|YP_004369092.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452082|gb|AEB07911.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 370 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C CV C + + I P +C+ C C CP I+ + ++LK Sbjct: 198 CTGCGD--CVAHCAQEAIRLEADKAVIDPAKCVGCAECILVCPYGNIEIQWNESIPVFLK 255 Query: 69 INSEY 73 EY Sbjct: 256 KMVEY 260 >gi|322831873|ref|YP_004211900.1| electron transport protein HydN [Rahnella sp. Y9602] gi|321167074|gb|ADW72773.1| electron transport protein HydN [Rahnella sp. Y9602] Length = 181 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 23/57 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP + + + + CI C C CP A++ T+P Sbjct: 58 CRQCEDAPCANVCPNGAILRTGDHVQVMQERCIGCKTCVVACPYGAMEVVTKPVFRQ 114 >gi|160887581|ref|ZP_02068584.1| hypothetical protein BACOVA_05603 [Bacteroides ovatus ATCC 8483] gi|156107992|gb|EDO09737.1| hypothetical protein BACOVA_05603 [Bacteroides ovatus ATCC 8483] Length = 635 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 578 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 632 >gi|15642785|ref|NP_227826.1| NADP-reducing hydrogenase, subunit C [Thermotoga maritima MSB8] gi|148270047|ref|YP_001244507.1| NADH dehydrogenase (quinone) [Thermotoga petrophila RKU-1] gi|170288731|ref|YP_001738969.1| NADH dehydrogenase (quinone) [Thermotoga sp. RQ2] gi|281412072|ref|YP_003346151.1| NADH dehydrogenase (quinone) [Thermotoga naphthophila RKU-10] gi|4980493|gb|AAD35104.1|AE001689_10 NADP-reducing hydrogenase, subunit C [Thermotoga maritima MSB8] gi|147735591|gb|ABQ46931.1| NADH dehydrogenase (quinone) [Thermotoga petrophila RKU-1] gi|170176234|gb|ACB09286.1| NADH dehydrogenase (quinone) [Thermotoga sp. RQ2] gi|281373175|gb|ADA66737.1| NADH dehydrogenase (quinone) [Thermotoga naphthophila RKU-10] Length = 607 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 +YV+ E C+ C T C VCPV C I EC+ CG C C AI T Sbjct: 540 SYVIDPEKCVGC--TACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVT 597 Query: 60 EP 61 Sbjct: 598 PA 599 >gi|119720314|ref|YP_920809.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525434|gb|ABL78806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 286 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPV 52 C+ C C CPV + I +ECI CG CE CP Sbjct: 95 CMHCATAPCSRACPVGAIKVTPEGAVVISKEECIGCGFCETACPF 139 >gi|78044500|ref|YP_359586.1| Fe-hydrogenase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|77996615|gb|ABB15514.1| Fe-hydrogenase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 592 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C C VCPV E + I P++CI CG C +C AI Sbjct: 542 DKCVGCG--ACARVCPVGAISGERKQPHQIDPEKCIKCGSCMEKCKFGAI 589 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I D+C+ CG C CPV AI + + + Sbjct: 539 ILEDKCVGCGACARVCPVGAISGERKQPHQ 568 >gi|51892072|ref|YP_074763.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] gi|51855761|dbj|BAD39919.1| ferredoxin [Symbiobacterium thermophilum IAM 14863] Length = 96 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + + CI C C CP + G+ I PD+C +C C CPV+ Sbjct: 1 MAVKIIDTCISCG--ACEPECPNEAISPGDTIYVIDPDKCTECYGFYSESQCIAVCPVEC 58 Query: 55 IKPDTEP 61 I PD + Sbjct: 59 IIPDEDH 65 >gi|148266186|ref|YP_001232892.1| sigma-54 dependent trancsriptional regulator [Geobacter uraniireducens Rf4] gi|146399686|gb|ABQ28319.1| sigma54 specific transcriptional regulator, Fis family [Geobacter uraniireducens Rf4] Length = 755 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 TE C C CV CPV +N+ I + CI CG C CP A Sbjct: 8 TEKCRKC--YSCVRSCPVKAIKVEKNYSEIIFERCIGCGNCLSNCPQHA 54 >gi|119983|sp|P14073|FER_BUTME RecName: Full=Ferredoxin Length = 55 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y +T+ CI C C + CPV+ EG I C DCG C +CPV+AI P+ Sbjct: 1 AYKITDECIACG--SCADQCPVEAISEGS-IYEIDEALCTDCGACADQCPVEAIVPED 55 >gi|304410948|ref|ZP_07392565.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307304881|ref|ZP_07584631.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|304350845|gb|EFM15246.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306912283|gb|EFN42707.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] Length = 260 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|299146440|ref|ZP_07039508.1| protein HymB [Bacteroides sp. 3_1_23] gi|298516931|gb|EFI40812.1| protein HymB [Bacteroides sp. 3_1_23] Length = 635 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 578 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 632 >gi|212223165|ref|YP_002306401.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus onnurineus NA1] gi|212008122|gb|ACJ15504.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus onnurineus NA1] Length = 638 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 27/59 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VV E C CK + CP + N + I C CGVC CP DAIK +E G Sbjct: 578 VVEEKCTGCKACILLTGCPALVYDPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELG 636 >gi|167752987|ref|ZP_02425114.1| hypothetical protein ALIPUT_01250 [Alistipes putredinis DSM 17216] gi|167659301|gb|EDS03431.1| hypothetical protein ALIPUT_01250 [Alistipes putredinis DSM 17216] Length = 271 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + + I+ D CI CG+C CP AI Sbjct: 108 YEITNLCKGCVARACATNCPKNAIEFNRAGKAVINHDLCISCGICHSNCPYHAIVY 163 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E + I +CI CG C CP Sbjct: 144 DLCISCGICHSNCPYHAIVYMPVPCEEACPVKAITKDERGVEHIDESKCIYCGKCINSCP 203 Query: 52 VDAIKP 57 AI Sbjct: 204 FGAIFE 209 >gi|160872682|ref|ZP_02062814.1| iron-sulfur cluster binding protein [Rickettsiella grylli] gi|159121481|gb|EDP46819.1| iron-sulfur cluster binding protein [Rickettsiella grylli] Length = 217 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 MT + E CI C T C++ CPVD L + EC CG+C CPVD I Sbjct: 88 MTARIRESECIGC--TKCIQACPVDAIVGAAKQLHVVLKQECTGCGLCIAPCPVDCI 142 >gi|238798700|ref|ZP_04642173.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia mollaretii ATCC 43969] gi|238717457|gb|EEQ09300.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia mollaretii ATCC 43969] Length = 205 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C CV CP + E + + ++PD C+ C CE CP A + D + Sbjct: 60 YYLSIACNHCSFPTCVTGCPTGAMHKREEDGLVVVNPDLCVGCRYCEMRCPYGAPQFDAK 119 >gi|260171115|ref|ZP_05757527.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] gi|315919435|ref|ZP_07915675.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] gi|313693310|gb|EFS30145.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D2] Length = 635 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 578 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 632 >gi|237722430|ref|ZP_04552911.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298481910|ref|ZP_07000099.1| hydrogenase HymB subunit [Bacteroides sp. D22] gi|229448240|gb|EEO54031.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298271774|gb|EFI13346.1| hydrogenase HymB subunit [Bacteroides sp. D22] Length = 635 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 578 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 632 >gi|315230306|ref|YP_004070742.1| Fe-S-cluster-containing hydrogenase components 1 [Thermococcus barophilus MP] gi|315183334|gb|ADT83519.1| Fe-S-cluster-containing hydrogenase components 1 [Thermococcus barophilus MP] Length = 168 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 NC C+ C+ VCP + Y+ + I P +CI C +C CP A D Sbjct: 47 NCRHCEKAPCMNVCPSNAIYKDTDGAVIIDPKKCIGCLMCLAVCPFGAPSYDAR 100 >gi|307266701|ref|ZP_07548229.1| Fe-S cluster domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918303|gb|EFN48549.1| Fe-S cluster domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 435 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 1 MTYV--VT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M+Y VT + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 1 MSYFHSVTLDKDRCRGC--TNCIKRCPTEAIRVRDGKARIINERCIDCGECIRVCPYHA 57 >gi|237715807|ref|ZP_04546288.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D1] gi|262407422|ref|ZP_06083970.1| NADH oxidoreductase (quinone), F subunit [Bacteroides sp. 2_1_22] gi|293371348|ref|ZP_06617785.1| protein HymB [Bacteroides ovatus SD CMC 3f] gi|229443454|gb|EEO49245.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. D1] gi|262354230|gb|EEZ03322.1| NADH oxidoreductase (quinone), F subunit [Bacteroides sp. 2_1_22] gi|292633708|gb|EFF52263.1| protein HymB [Bacteroides ovatus SD CMC 3f] gi|295087526|emb|CBK69049.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Bacteroides xylanisolvens XB1A] Length = 635 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 578 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 632 >gi|219667681|ref|YP_002458116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537941|gb|ACL19680.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 178 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 +C+ C C VCP + + E+ L I D+C+ CG C CP A K Sbjct: 58 SCMHCAEPQCASVCPTKAYTKREDGLVIQDHDKCVGCGYCIYACPYQAPK 107 >gi|197123586|ref|YP_002135537.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196173435|gb|ACG74408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 273 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++ V + C C+ T C++VCPV Y + + + + CI C C CP Sbjct: 139 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGVVLVDGERCIGCAYCVQACPFG 191 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 11/21 (52%) Query: 33 LAIHPDECIDCGVCEPECPVD 53 + P++CI CG C C + Sbjct: 73 YLVDPEKCIGCGSCVRACSAE 93 >gi|29345535|ref|NP_809038.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides thetaiotaomicron VPI-5482] gi|253571682|ref|ZP_04849088.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 1_1_6] gi|29337427|gb|AAO75232.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides thetaiotaomicron VPI-5482] gi|251838890|gb|EES66975.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 1_1_6] Length = 635 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E CI C C + CP D IHP++CI CG+C C AI Sbjct: 578 LTYTINPELCIGC--HLCAKNCPADAISGLVRKPHVIHPEKCIKCGMCMARCKFKAI 632 >gi|89896465|ref|YP_519952.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89335913|dbj|BAE85508.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 178 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 +C+ C C VCP + + E+ L I D+C+ CG C CP A K Sbjct: 58 SCMHCAEPQCASVCPTKAYTKREDGLVIQDHDKCVGCGYCIYACPYQAPK 107 >gi|50120165|ref|YP_049332.1| hydrogenase 2 protein HybA [Pectobacterium atrosepticum SCRI1043] gi|49610691|emb|CAG74136.1| hydrogenase-2 operon protein [Pectobacterium atrosepticum SCRI1043] Length = 336 Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + + PD C C C CP + K D + Sbjct: 114 IKKQCMHCVDPNCVSVCPVQALRKDAHTGIVHYDPDVCTGCRYCIVGCPFNVPKYDYDDP 173 Query: 63 L 63 Sbjct: 174 F 174 >gi|257064392|ref|YP_003144064.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792045|gb|ACV22715.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 398 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 K C+E C C +N + + P +CI CG C CP DAI P EL Sbjct: 32 KCMRCLESCAGGCIGYEDNEITVDPTKCIGCGTCATVCPTDAIHPKKPTDAEL 84 >gi|271965199|ref|YP_003339395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Streptosporangium roseum DSM 43021] gi|270508374|gb|ACZ86652.1| 4Fe-4S ferredoxin iron-sulfur binding domain- containing protein [Streptosporangium roseum DSM 43021] Length = 288 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 87 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQADVCNGCGYCVPACPYGVI 137 >gi|257790196|ref|YP_003180802.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474093|gb|ACV54413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 209 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + V+ C C C+EVCP + E L + CI CG C CP A K D Sbjct: 60 AFYVSSACNHCASPACMEVCPTGAMGKNELGLVSVDEHRCIGCGYCALSCPYHAPKVD 117 >gi|294634056|ref|ZP_06712612.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Streptomyces sp. e14] gi|292830052|gb|EFF88405.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Streptomyces sp. e14] Length = 327 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP + E + + D C CG C P CP I E G Sbjct: 147 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQEDVCNGCGYCVPACPYGVIDQRKEDG 204 >gi|163752014|ref|ZP_02159224.1| TtrB [Shewanella benthica KT99] gi|161328119|gb|EDP99287.1| TtrB [Shewanella benthica KT99] Length = 231 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 V C C + CV VCPV Y+ + + I DECI C +C CP A Sbjct: 84 VPNQCNQCDNPACVYVCPVGATYKRKEDGIVVIDHDECIYCQLCVDACPYGA 135 >gi|118431333|ref|NP_147723.2| putative ATPase RIL [Aeropyrum pernix K1] gi|116062656|dbj|BAA80104.2| ABCE1 homolog [Aeropyrum pernix K1] Length = 614 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 17/80 (21%) Query: 7 ENCI--LCKHTDCVEVCPV---------DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C C + +C+ VCPV D I+ D CI C +C CP DAI Sbjct: 15 DSCKPKKCSY-ECIAVCPVNKSGRGVAIDADMASRGKPVIYEDACIGCALCVKACPFDAI 73 Query: 56 K-----PDTEPGLELWLKIN 70 + E +N Sbjct: 74 YIVNLPMELEEEAVHRYGVN 93 >gi|91780908|ref|YP_556115.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] gi|91693568|gb|ABE36765.1| benzoyl-CoA oxygenase, component A [Burkholderia xenovorans LB400] Length = 414 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E CP+D +N + D C C C CP AI Sbjct: 18 EICIRCN--TCEETCPIDAITHDDNNYVVKADVCNGCMACVSPCPTGAI 64 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 15 IDPEICIRCNTCEETCPIDAITHDDN 40 >gi|78185994|ref|YP_374037.1| hypothetical protein Plut_0104 [Chlorobium luteolum DSM 273] gi|78165896|gb|ABB22994.1| hypothetical protein Plut_0104 [Chlorobium luteolum DSM 273] Length = 83 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 8/62 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M + + + CI+C C CPV+ G++ I +C+DC C CP D+ Sbjct: 22 MAHKINDTCIMCG--ACEPECPVNAISPGDDTYVIDATKCVDCVGHHDEPACVAVCPSDS 79 Query: 55 IK 56 I+ Sbjct: 80 IE 81 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D CI CG CEPECPV+AI P + Sbjct: 28 DTCIMCGACEPECPVNAISPGDD 50 >gi|331674371|ref|ZP_08375131.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA280] gi|331068465|gb|EGI39860.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA280] Length = 644 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 T C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 58 TVACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|242398619|ref|YP_002994043.1| Pyruvate-formate lyase-activating enzyme [Thermococcus sibiricus MM 739] gi|242265012|gb|ACS89694.1| Pyruvate-formate lyase-activating enzyme [Thermococcus sibiricus MM 739] Length = 301 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP + EN I ++C CGVC CP A++ Sbjct: 55 CIHC--HTCVKVCPENAISFDENETQQIDREKCTGCGVCASACPTSALR 101 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLE 64 +CI C C CP +AI D + Sbjct: 54 KCIHCHTCVKVCPENAISFDENETQQ 79 >gi|89893633|ref|YP_517120.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89333081|dbj|BAE82676.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 205 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAI-HPDECIDCGVCEPECPVDA 54 + + NC C + CV+ CPV + E+ L I D+CI C +C CP +A Sbjct: 58 HHIPLNCQHCGNPACVKACPVGATYKREEDGLVIQDYDKCIGCRMCMVACPYNA 111 >gi|260461936|ref|ZP_05810181.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] gi|259032183|gb|EEW33449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mesorhizobium opportunistum WSM2075] Length = 244 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + + + I D+CI C +C CP A + DT+ G Sbjct: 80 SCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVG 136 >gi|322685522|gb|EFY81518.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] Length = 176 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 31 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 87 >gi|310642489|ref|YP_003947247.1| oxidoreductase fe-s binding subunit [Paenibacillus polymyxa SC2] gi|309247439|gb|ADO57006.1| Oxidoreductase Fe-S binding subunit [Paenibacillus polymyxa SC2] Length = 196 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP + + I+ + CI C C CP AI Sbjct: 59 CRHCEDAPCANACPNGSITNADGCILINSESCIGCKTCMIACPYGAI 105 >gi|307596381|ref|YP_003902698.1| methyl-viologen-reducing hydrogenase subunit delta [Vulcanisaeta distributa DSM 14429] gi|307551582|gb|ADN51647.1| methyl-viologen-reducing hydrogenase delta subunit [Vulcanisaeta distributa DSM 14429] Length = 1129 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C C++ CP H P C CG C ECP DAI D + Sbjct: 921 CTKCGL--CIKACPYGAIRGVPGKWIEHIPAACQGCGACVAECPQDAITLDAMSDDVILA 978 Query: 68 KINSEYATQ 76 ++ + A + Sbjct: 979 QVEAALAEE 987 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 39 ECIDCGVCEPECPVDAIK 56 +C CG+C CP AI+ Sbjct: 920 KCTKCGLCIKACPYGAIR 937 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 24/76 (31%), Gaps = 27/76 (35%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECID---- 42 VT++C C C +VCPV E + D C++ Sbjct: 101 VTDDCTKCGQ--CEDVCPVIVPSEFEAGIGARKAIYLPFPQAEPGIYMLDIDHCLNKPPN 158 Query: 43 ---CGVCEPECPVDAI 55 C C C +AI Sbjct: 159 YFPCDRCAKACDRNAI 174 >gi|271501252|ref|YP_003334277.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270344807|gb|ACZ77572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 339 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + +H D C C C CP D K D E Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALKKDPKTGVVHYDASICTGCRYCMVACPFDVPKYDYENP 172 Query: 63 L 63 L Sbjct: 173 L 173 >gi|213163783|ref|ZP_03349493.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 171 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 26 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 82 >gi|169830310|ref|YP_001716292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637154|gb|ACA58660.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 1013 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C C CV VCP E +N ++ C CG C CP A + + Sbjct: 946 DKCSGC--RICVTVCPYSAISFLEAQNVAEVNEVLCKGCGTCAAACPSHAAEHQGFKDEQ 1003 Query: 65 LWLKINSEY 73 L+ +I + Sbjct: 1004 LFAEIEAFL 1012 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 32/89 (35%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAI-HPDECID- 42 YV + C+ C C CPV D F EG N AI HP++C+ Sbjct: 102 YVDADKCVACGD--CAAKCPVKVSDEFNEGLEIRKIIANKYPQAVPNTYAITHPEKCLYL 159 Query: 43 ----------CGVCEPECPVDAIKPDTEP 61 C +C+ C DAI + + Sbjct: 160 TKGVQTGKPVCLLCQKACGKDAINWEDKE 188 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 7/72 (9%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 + D+C C +C CP AI + ++N S AA+ Sbjct: 943 VDKDKCSGCRICVTVCPYSAISF---LEAQNVAEVNEVLCKGCGTCAAACPS--HAAEHQ 997 Query: 95 GVKQKYEKYFSP 106 G K E+ F+ Sbjct: 998 GFKD--EQLFAE 1007 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 + D+C+ CG C +CPV + + GLE+ I ++Y PN Sbjct: 102 YVDADKCVACGDCAAKCPVK-VSDEFNEGLEIRKIIANKYPQAVPN 146 >gi|90410032|ref|ZP_01218049.1| anaerobic dimethyl sulfoxide reductase subunit B [Photobacterium profundum 3TCK] gi|90329385|gb|EAS45642.1| anaerobic dimethyl sulfoxide reductase subunit B [Photobacterium profundum 3TCK] Length = 210 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C C + CP ++ + + ++ D C+ C CE CP A + + E Sbjct: 65 YYVSISCNHCADPACTKACPSGAMHKRKKDGLVVVNEDVCVGCRYCEMACPYGAPQFNKE 124 Query: 61 PGL 63 G Sbjct: 125 KGH 127 >gi|294495627|ref|YP_003542120.1| CoB--CoM heterodisulfide reductase subunit A [Methanohalophilus mahii DSM 5219] gi|292666626|gb|ADE36475.1| CoB--CoM heterodisulfide reductase subunit A [Methanohalophilus mahii DSM 5219] Length = 784 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V + CI C C +VC + C CG C CPVDAI Sbjct: 573 AHVDYDTCIGCGV--CTDVCDYGTIKIENGKAFVDEVSCHGCGTCSAACPVDAISMHNHT 630 Query: 62 GLELWLKINSEY 73 ++ +I + Sbjct: 631 DEQVRAQIKAAL 642 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 19/79 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL------------------AIHPDECIDCG 44 YV E C C +C VCPV+ ++ L I D C+ CG Sbjct: 237 YVSEEKCKGCVD-ECSRVCPVEIPSRFDSGLGKSRAINIPIPQAVPQVAYIDGDYCVGCG 295 Query: 45 VCEPECPVDAIKPDTEPGL 63 +C CP DA++ + + Sbjct: 296 LCAQACPADAVEFEQQTTQ 314 >gi|283784717|ref|YP_003364582.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter rodentium ICC168] gi|282948171|emb|CBG87738.1| anaerobic dimethyl sulfoxide reductase chain B [Citrobacter rodentium ICC168] Length = 205 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C C +VCP ++ E+ F+ + + CI C C CP A + Sbjct: 60 AYYLSISCNHCADPACTKVCPSGAMHKREDGFVVVDEEVCIGCRYCHMACPYGAPQY 116 >gi|198276949|ref|ZP_03209480.1| hypothetical protein BACPLE_03154 [Bacteroides plebeius DSM 17135] gi|198270474|gb|EDY94744.1| hypothetical protein BACPLE_03154 [Bacteroides plebeius DSM 17135] Length = 293 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 1 MT--YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 M ++ CI CK CV +CP F E+ + ++ D+CI CG C CP ++I+ Sbjct: 9 MAQIHINQNTCIRCK--KCVRICPSALFTLQEDKGIEVNTDDCISCGHCVAVCPTNSIEH 66 Query: 58 DTEPGLE 64 P + Sbjct: 67 ADFPPEK 73 >gi|89897363|ref|YP_520850.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336811|dbj|BAE86406.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 193 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C + CVEVCPV Y+ E+ + + +CI CG C CP +A Sbjct: 64 CNHCDNAPCVEVCPVKASYKREDGMVLLDKKKCIGCGYCVASCPYNA 110 >gi|322616397|gb|EFY13306.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619647|gb|EFY16522.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622657|gb|EFY19502.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322637033|gb|EFY33736.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641606|gb|EFY38243.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644439|gb|EFY40979.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649591|gb|EFY46022.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654107|gb|EFY50430.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322663496|gb|EFY59698.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670232|gb|EFY66372.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671468|gb|EFY67590.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676824|gb|EFY72891.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682749|gb|EFY78768.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686428|gb|EFY82410.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323199761|gb|EFZ84850.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323209025|gb|EFZ93962.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215841|gb|EGA00582.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323226862|gb|EGA11045.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229816|gb|EGA13939.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233041|gb|EGA17137.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240776|gb|EGA24818.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323258529|gb|EGA42199.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267980|gb|EGA51459.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 205 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|194431782|ref|ZP_03064073.1| hydrogenase-2 electron transfer subunit [Shigella dysenteriae 1012] gi|194420138|gb|EDX36216.1| hydrogenase-2 electron transfer subunit [Shigella dysenteriae 1012] gi|332088503|gb|EGI93620.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella dysenteriae 155-74] Length = 328 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|150018464|ref|YP_001310718.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] gi|149904929|gb|ABR35762.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] Length = 268 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C CV CP E + ++P+ CI+CG C CP +AI Sbjct: 9 EKCIKCG--MCVVECPTGVLKLEADGPKEVNPNACIECGHCVAVCPKEAI 56 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++CI CG+C ECP +K + + E Sbjct: 8 KEKCIKCGMCVVECPTGVLKLEADGPKE 35 >gi|302389032|ref|YP_003824853.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Thermosediminibacter oceani DSM 16646] gi|302199660|gb|ADL07230.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Thermosediminibacter oceani DSM 16646] Length = 315 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 TE C C C CP C +GE+ + C CG+C CP AI E E Sbjct: 258 TEACTQC--WTCWIYCPDTCIKKGEDGPLFNLKYCKGCGLCAAVCPTGAITEVPELDFED 315 >gi|240103186|ref|YP_002959495.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] gi|239910740|gb|ACS33631.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] Length = 658 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V+ + C CK + CP + N + I C CGVC CP DAIK +E Sbjct: 594 LPVVIEDKCTGCKACILLTGCPALVYDPETNKVRIDSLLCTGCGVCNQTCPFDAIKFPSE 653 Query: 61 PG 62 Sbjct: 654 LE 655 >gi|197284081|ref|YP_002149953.1| anaerobic dimethyl sulfoxide reductase subunit B [Proteus mirabilis HI4320] gi|227358047|ref|ZP_03842389.1| tetrathionate reductase B subunit [Proteus mirabilis ATCC 29906] gi|194681568|emb|CAR40516.1| anaerobic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Proteus mirabilis HI4320] gi|227161782|gb|EEI46814.1| tetrathionate reductase B subunit [Proteus mirabilis ATCC 29906] Length = 183 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 +T +C C C++VCP D + + + + I D+CI C +C CP +A D Sbjct: 53 FITMSCNHCDDPQCLKVCPADTYTKRADGIVIQDHDKCIGCQMCIMACPYNAPVYD 108 >gi|94266321|ref|ZP_01290023.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93453075|gb|EAT03554.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 270 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + V + C C CV VCP Y+ + + + CI CG C CP A Sbjct: 137 FFVPKLCNQCDKPSCVSVCPAGATYKTNDGVVLVDQSWCIGCGYCITNCPYGA 189 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 13/55 (23%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVDA 54 CI C + C+ CP + + I D+C C C C A Sbjct: 175 CIGCGY--CITNCPYGARFFHPEWEVI--DKCTFCYHRITKGMNSACVDACAFGA 225 >gi|224535656|ref|ZP_03676195.1| hypothetical protein BACCELL_00520 [Bacteroides cellulosilyticus DSM 14838] gi|224522729|gb|EEF91834.1| hypothetical protein BACCELL_00520 [Bacteroides cellulosilyticus DSM 14838] Length = 635 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E CI C C + CP D I+PD+CI CG+C C AI Sbjct: 578 LTYTINPELCIGC--HLCFKHCPADAILGDVRKPHVINPDKCIKCGMCMARCKFKAI 632 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 15/31 (48%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P+ CI C +C CP DAI D Sbjct: 580 YTINPELCIGCHLCFKHCPADAILGDVRKPH 610 >gi|297526831|ref|YP_003668855.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] gi|297255747|gb|ADI31956.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] Length = 166 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C+ C+ C+ VCPV+ I+ D+CI C C CP AI Sbjct: 60 IPTTCMQCEDAPCMRVCPVNAITYNPETGAYIINHDKCIGCYECVYACPFGAI 112 >gi|288931033|ref|YP_003435093.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893281|gb|ADC64818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 252 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +Y V + C CK CV+VCPV Y+ + + + C+ C C CP A Sbjct: 113 SYFVPKLCNQCKDPPCVQVCPVGATYKTPDGVILVDEKYCLGCRYCIQACPYGA 166 >gi|308069433|ref|YP_003871038.1| Electron transport protein hydN [Paenibacillus polymyxa E681] gi|305858712|gb|ADM70500.1| Electron transport protein hydN [Paenibacillus polymyxa E681] Length = 196 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP + + I+ + CI C C CP AI Sbjct: 59 CRHCEDAPCANACPNGSITNADGCILINSESCIGCKTCMIACPYGAI 105 >gi|153864406|ref|ZP_01997318.1| Anaerobic dimethyl sulfoxide reductase chain B [Beggiatoa sp. SS] gi|152146097|gb|EDN72680.1| Anaerobic dimethyl sulfoxide reductase chain B [Beggiatoa sp. SS] Length = 253 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y V +C C C+ CP +N + I CI C CE CP A + D Sbjct: 109 AYKVNMSCNHCAEPACLPTCPTGAIWKRQDNGVVDIDSTLCIGCRRCEAACPYGAPQFDP 168 Query: 60 EPGL 63 GL Sbjct: 169 NDGL 172 >gi|134298565|ref|YP_001112061.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051265|gb|ABO49236.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 196 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV + C C CV CP GE I +C++CG C CP AI Sbjct: 80 VVGDGCTACGL--CVSACPDQAIVLGEEGPCIVESQCLNCGKCAKICPTGAIY 130 >gi|118591778|ref|ZP_01549174.1| iron-sulfur cluster-binding protein [Stappia aggregata IAM 12614] gi|118435771|gb|EAV42416.1| iron-sulfur cluster-binding protein [Stappia aggregata IAM 12614] Length = 654 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C+++CP + +++ C CG C CP AI D P + ++ Sbjct: 278 RKTGCTRCLDLCPTGAITPDGDHVSVDTMVCAGCGSCSAVCPSGAISYDAPPVSNTFQRL 337 Query: 70 NSEYATQW 77 + A W Sbjct: 338 QT-LAATW 344 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C LC CV +CP E + L D C+ CG+C CP A+ D L Sbjct: 504 DACTLCL--SCVSLCPSGALKENPDAPQLRFQEDACLQCGICTTICPEKALSLDPRLDLS 561 Query: 65 L 65 Sbjct: 562 D 562 >gi|86159508|ref|YP_466293.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85776019|gb|ABC82856.1| tetrathionate reductase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 274 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++ V + C C+ T C++VCPV Y + + + + CI C C CP Sbjct: 140 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGVVLVDGERCIGCAYCVQACPFG 192 >gi|332800507|ref|YP_004462006.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] gi|332698242|gb|AEE92699.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] Length = 382 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA-IKPDTEPGLE 64 + CI C CV+VCP + + I C+ CG C C A I P TE G + Sbjct: 197 DKCIRCGQ--CVDVCPHGAIKLMNDCIVIDKSICVKCGRCSRVCEAKALIVPITEEGFQ 253 >gi|302387721|ref|YP_003823543.1| NADH dehydrogenase (quinone) [Clostridium saccharolyticum WM1] gi|302198349|gb|ADL05920.1| NADH dehydrogenase (quinone) [Clostridium saccharolyticum WM1] Length = 595 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ E C C T C CPV+ +N I P++CI CGVC +C DA+ Sbjct: 541 YIDAEKCKGC--TLCARNCPVNAISGSVKNPHVIDPEKCIKCGVCMEKCKFDAVY 593 Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I ++C C +C CPV+AI Sbjct: 529 CPAG-VCKALLSYYIDAEKCKGCTLCARNCPVNAI 562 >gi|158334537|ref|YP_001515709.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acaryochloris marina MBIC11017] gi|158304778|gb|ABW26395.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Acaryochloris marina MBIC11017] Length = 75 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +EG ++ I CIDCG+C+ CPV Sbjct: 1 MAHTIVTDVCEGI--ADCVDACPVACIHEGPGKNVIGTDWYWIDFSTCIDCGICQQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 D AI + L+ Sbjct: 59 DGAILAEERSDLQK 72 >gi|94967486|ref|YP_589534.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94549536|gb|ABF39460.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 729 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C C CP + D+CI C C CP P+ + Sbjct: 86 CLHCLEPACTSACPTTALARMADGPVGYDADKCIGCRYCVWACPWGVPTPEWD 138 >gi|167622043|ref|YP_001672337.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352065|gb|ABZ74678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 559 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V TENC LC CV CP +G + A+H +C+ CG+CE CP I Sbjct: 424 VNTENCTLC--MSCVSTCPTMALTDGGDLPALHFVEQDCVQCGLCETACPEKVI 475 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 18/49 (36%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C+ CP D E + I P C G C CP AI D Sbjct: 197 TRCLNFCPADAIASIEKKIEIDPYLCHGAGSCTNACPTGAISYDLPTPQ 245 >gi|319785595|ref|YP_004145071.1| DMSO reductase chain B [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171483|gb|ADV15021.1| DMSO reductase chain B [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 244 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + + + I D+CI C +C CP A + DT+ G Sbjct: 80 SCLHCETPACVTVCPTGASYKRASDGIVLIDEDKCIGCKLCSWACPYGAREFDTDVG 136 >gi|317489629|ref|ZP_07948133.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325830197|ref|ZP_08163654.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|316911223|gb|EFV32828.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325487664|gb|EGC90102.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 209 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C CV CP + E + + CI C C+ CP DA D E Sbjct: 62 YFVSMACNHCVDPACVANCPTGAMQKDEETGIVWTDHEVCIGCKTCQTVCPYDAPTYDDE 121 Query: 61 PG 62 G Sbjct: 122 AG 123 >gi|149920260|ref|ZP_01908731.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] gi|149818847|gb|EDM78287.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Plesiocystis pacifica SIR-1] Length = 96 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE CI C C CP + EGE I P+ C +C C+ CPV+ Sbjct: 1 MATHITEECINCG--ACEPECPNEAISEGEEIYVIDPNLCTECVGFHEYEACQAVCPVEC 58 Query: 55 IKPDTE 60 PD E Sbjct: 59 CLPDPE 64 >gi|148242469|ref|YP_001227626.1| ferredoxin [Synechococcus sp. RCC307] gi|147850779|emb|CAK28273.1| Ferredoxin [Synechococcus sp. RCC307] Length = 74 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDECIDCGVCEPECPVD 53 M + + N + DCV+ CPV C + G+ F I CIDCG+C CPV+ Sbjct: 1 MAHTIVTN-VCEGIADCVDACPVACIHPGQGANTKGTGFYWIDFQTCIDCGICLQVCPVE 59 Query: 54 -AIKPDTEPGLE 64 AI P+ P L+ Sbjct: 60 GAIVPEERPDLQ 71 >gi|94269933|ref|ZP_01291606.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93451006|gb|EAT01977.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 270 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + V + C C CV VCP Y+ + + + CI CG C CP A Sbjct: 137 FFVPKLCNQCDKPSCVSVCPAGATYKTNDGVVLVDQSWCIGCGYCITNCPYGA 189 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 13/55 (23%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVDA 54 CI C + C+ CP + + I D+C C C C A Sbjct: 175 CIGCGY--CITNCPYGARFFHPEWEVI--DKCTFCYHRITKGMNSACVDACAFGA 225 >gi|78355728|ref|YP_387177.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218133|gb|ABB37482.1| Fe-S-cluster-containing hydrogenase components 1-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 285 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 C+ C+ CVE CP ++ + I P CI CG C P CP A Sbjct: 60 ACMHCESPTCVEACPTGATWKDRETGIVEIDPALCIGCGNCIPACPYGA 108 >gi|332289789|ref|YP_004420641.1| electron transport complex protein RnfB [Gallibacterium anatis UMN179] gi|330432685|gb|AEC17744.1| electron transport complex protein RnfB [Gallibacterium anatis UMN179] Length = 202 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-T 59 ++ E CI C T C++ CPVD L + PD C C +C CP D I + Sbjct: 112 AFIHEEMCIGC--TKCIQACPVDAIIGANKALHTVIPDLCTGCELCVAPCPTDCITMEKV 169 Query: 60 EPGLELW 66 +P L+ W Sbjct: 170 KPSLDSW 176 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 22 PVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 P F E IH + CI C C CPVDAI Sbjct: 99 PQGVFEEEPVPKVAFIHEEMCIGCTKCIQACPVDAI 134 >gi|269104673|ref|ZP_06157369.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium damselae subsp. damselae CIP 102761] gi|268161313|gb|EEZ39810.1| anaerobic dimethyl sulfoxide reductase chain B [Photobacterium damselae subsp. damselae CIP 102761] Length = 207 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y V+ +C C C + CP + E + + + C+ C CE CP A + ++ Sbjct: 61 AYYVSISCNHCSQPACTKACPTGAMHKREQDGLVVVDEQVCVGCRYCEMACPYGAPQYNS 120 Query: 60 E 60 E Sbjct: 121 E 121 >gi|332978350|gb|EGK15075.1| electron transport complex [Psychrobacter sp. 1501(2011)] Length = 275 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD + I D C C +C P CPVD I Sbjct: 113 DDCIGC--TKCIPACPVDAIVGTGKHMHTIISDLCTGCELCLPPCPVDCI 160 Score = 40.9 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 22 PVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 PVD E I D+CI C C P CPVDAI Sbjct: 95 PVDPNTHRPTEVRAVIREDDCIGCTKCIPACPVDAI 130 >gi|218782798|ref|YP_002434116.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764182|gb|ACL06648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 361 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C+ C C + C V EG++ + P+ CI CG+C CP +AI +P E Sbjct: 278 DECVACGV--CADERCQVRAIEEGDDAYRVKPEACIGCGLCVSTCPSEAISLIRKPEEE 334 Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 34 AIHPDECIDCGVCEPE-CPVDAIKPDTEP 61 I PDEC+ CGVC E C V AI+ + Sbjct: 274 VIDPDECVACGVCADERCQVRAIEEGDDA 302 >gi|77918446|ref|YP_356261.1| NADH dehydrogenase I subunit F [Pelobacter carbinolicus DSM 2380] gi|77544529|gb|ABA88091.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Pelobacter carbinolicus DSM 2380] Length = 617 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +TY +V + C+ C C++ CPV GE A I +C+ CG C P+C DAI Sbjct: 560 LTYAIVEDKCVGCGV--CIKACPVGAIT-GEKKAAHTIDASKCVKCGACVPKCKFDAI 614 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 AI D+C+ CGVC CPV AI + + Sbjct: 562 YAIVEDKCVGCGVCIKACPVGAITGEKKAAH 592 >gi|15602588|ref|NP_245660.1| TTRB [Pasteurella multocida subsp. multocida str. Pm70] gi|12721017|gb|AAK02807.1| TtrB [Pasteurella multocida subsp. multocida str. Pm70] Length = 245 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV Y+ ++ + + + CI C C CP DA I +T+ + Sbjct: 99 CNHCDNPPCVPVCPVQATYQRKDGIVVVDNERCIGCAYCVQACPYDARFINEETKTADK 157 >gi|311279771|ref|YP_003942002.1| hydrogenase 2 protein HybA [Enterobacter cloacae SCF1] gi|308748966|gb|ADO48718.1| hydrogenase 2 protein HybA [Enterobacter cloacae SCF1] Length = 340 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + +PD C C C CP + K D + Sbjct: 114 IKKQCMHCVDPNCVSVCPVQAMQKDPKTGIVHYNPDVCTGCRYCMVGCPFNVPKYDYD 171 >gi|167625914|ref|YP_001676208.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355936|gb|ABZ78549.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 231 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 V C C + CV VCPV+ Y+ + + I+ DECI C +C CP A Sbjct: 84 VPNQCNQCDNPACVYVCPVEATYKRKEDGIVVINHDECIHCQLCVDACPYGA 135 >gi|145591167|ref|YP_001153169.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282935|gb|ABP50517.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 188 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C++ CV VCP Y+ + L I P+ CI C C CP +A D GL Sbjct: 63 CQHCENAPCVIVCPTGASYKDVDGLVKIKPELCIGCKYCMVACPYEARWLDERTGLPQ 120 >gi|159041649|ref|YP_001540901.1| thiamine pyrophosphate binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920484|gb|ABW01911.1| thiamine pyrophosphate protein domain protein TPP-binding [Caldivirga maquilingensis IC-167] Length = 606 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEP 61 V + C C + CP E I P+ C+ C VC CP +AIKP + + Sbjct: 540 VDPDACKACGICYNLIACPAIAPLE-NRKAWIDPNMCVGCSVCAQVCPYNAIKPSGNAKE 598 Query: 62 GLELWLKI 69 L+ W ++ Sbjct: 599 WLDKWAEM 606 >gi|113461042|ref|YP_719109.1| tetrathionate reductase subunit B [Haemophilus somnus 129PT] gi|112823085|gb|ABI25174.1| tetrathionate reductase beta subunit [Haemophilus somnus 129PT] Length = 245 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV Y+ ++ + I CI C C CP DA I +T+ + Sbjct: 99 CNHCDNPPCVPVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDARFINSETKTADK 157 >gi|52549648|gb|AAU83497.1| Fe-S cluster binding protein [uncultured archaeon GZfos29E12] Length = 133 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ C +VCP D I D+CI CG C C + AI D E Sbjct: 54 CRACEYPPCAKVCPTDALRLRNGGGVILDKDKCIGCGFCAQACIMGAIFWDDELD 108 >gi|71065390|ref|YP_264117.1| putative electron transport complex, RnfABCDGE type, B subunit [Psychrobacter arcticus 273-4] gi|71038375|gb|AAZ18683.1| putative electron transport complex, RnfABCDGE type, B subunit [Psychrobacter arcticus 273-4] Length = 280 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 123 DDCIGC--TKCIPACPVDAIVGTGKHMHTIFTDLCTGCELCIAPCPVDCI 170 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I D+CI C C P CPVDAI Sbjct: 119 VIREDDCIGCTKCIPACPVDAI 140 >gi|238757228|ref|ZP_04618415.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia aldovae ATCC 35236] gi|238704606|gb|EEP97136.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia aldovae ATCC 35236] Length = 158 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 32 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 80 >gi|222625883|gb|EEE60015.1| hypothetical protein OsJ_12764 [Oryza sativa Japonica Group] Length = 815 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 714 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 770 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 695 PLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEERED 740 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 755 CIYCGF--CQEACPVDAIVEGPNF 776 >gi|319425005|gb|ADV53079.1| tetrathionate reductase, 4Fe-4S ferredoxin subunit, TtrB [Shewanella putrefaciens 200] Length = 260 Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|322641062|gb|EFY37706.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] Length = 205 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|300854908|ref|YP_003779892.1| putative electron transport protein [Clostridium ljungdahlii DSM 13528] gi|300435023|gb|ADK14790.1| predicted electron transport protein [Clostridium ljungdahlii DSM 13528] Length = 193 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + +N + + + CI C C CP A Sbjct: 61 CRQCEDAPCANVCPVRAISQLDNKIVVDTEACIGCKTCIMACPFGA 106 >gi|217974827|ref|YP_002359578.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|217499962|gb|ACK48155.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] Length = 260 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|160876964|ref|YP_001556280.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|160862486|gb|ABX51020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|315269167|gb|ADT96020.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 260 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|219669808|ref|YP_002460243.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540068|gb|ACL21807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 162 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T VV C C+ CV+VCP Y+ E + ++ + CI C +C CP +I TE Sbjct: 56 TTVVLTQCRQCEDAPCVKVCPNGSLYQEEGLVKLNRETCIGCKLCARACPFGSITMTTE 114 >gi|261823787|ref|YP_003261893.1| oxidoreductase Fe-S binding subunit [Pectobacterium wasabiae WPP163] gi|261607800|gb|ACX90286.1| glutamate synthase, small subunit [Pectobacterium wasabiae WPP163] Length = 674 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +N + + ++CI C C CP A+ T P Sbjct: 56 CRHCEDAPCAGVCPTQALIRKDNSIQLVQEKCIGCKSCVLACPFGAMSMVTNP 108 >gi|212633603|ref|YP_002310128.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212555087|gb|ACJ27541.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 214 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKPDT 59 T+ + C C CV CPV + E + L + D+CI C +C CP DA + DT Sbjct: 71 THYTSIGCNHCSEPVCVSTCPVGAMHKEQDTGLVKTNDDKCIGCNMCAQACPYDAPQMDT 130 Query: 60 E 60 E Sbjct: 131 E 131 >gi|218962108|ref|YP_001741883.1| putative iron-sulfur cluster-binding protein [Candidatus Cloacamonas acidaminovorans] gi|167730765|emb|CAO81677.1| putative iron-sulfur cluster-binding protein [Candidatus Cloacamonas acidaminovorans] Length = 374 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E C C CV+ CPV + + IH ++CI C C CP AI Sbjct: 313 VSERCKQCG--ICVKSCPVKAISWQNDTKPYIHKEQCIKCLCCHELCPYQAI 362 >gi|322632472|gb|EFY29218.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] Length = 162 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ Sbjct: 17 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSA 76 Query: 61 PGL 63 G Sbjct: 77 KGH 79 >gi|303257094|ref|ZP_07343108.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|331000953|ref|ZP_08324590.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|302860585|gb|EFL83662.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|329569912|gb|EGG51669.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 211 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C C + C+ VCP Y+G + + +CI CG C CP A K + W Sbjct: 55 SCQHCDNPACLPVCPAKAIYKGPHGEVLVDQSKCISCGACAMACPYGAPKFNRSGKTSYW 114 >gi|238799475|ref|ZP_04642883.1| Electron transport protein hydN [Yersinia mollaretii ATCC 43969] gi|238716677|gb|EEQ08585.1| Electron transport protein hydN [Yersinia mollaretii ATCC 43969] Length = 158 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 32 TIMCRHCEDAPCANVCPNGAIIRAADSIQVLQEKCIGCKTCVVACPYGA 80 >gi|254471603|ref|ZP_05085005.1| nitrate reductase beta chain [Pseudovibrio sp. JE062] gi|211959749|gb|EEA94947.1| nitrate reductase beta chain [Pseudovibrio sp. JE062] Length = 239 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 V+ C C C+ VCPV+ F E + + ++C+ CG C CP +A Sbjct: 83 VLPRLCNHCDEPPCIPVCPVNATFKTDEGAVVVDAEQCVACGYCVQACPYEA 134 >gi|85857990|ref|YP_460192.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] gi|85721081|gb|ABC76024.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] Length = 265 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C+ C CV+VCP Y E I+ +CI C C CP D + + E Sbjct: 74 DGCMHCTDAACVKVCPSGALYHTEYGTVGINQAKCIGCKYCISACPFDVPRYNPETD 130 >gi|187250942|ref|YP_001875424.1| FeFe Hydrogenase HydB [Elusimicrobium minutum Pei191] gi|186971102|gb|ACC98087.1| FeFe Hydrogenase HydB (NuoF) [Elusimicrobium minutum Pei191] Length = 620 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E C+ C T C CPV E + +H ++CI CG C C AIK D Sbjct: 567 VIEEKCVGC--TACKRACPVGAITGEVKQKHFVHQEKCIKCGQCFSACKFSAIKKD 620 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CP + I ++C+ C C+ CPV AI + + + ++ Sbjct: 554 CPTGKCSSLVRYSVI-EEKCVGCTACKRACPVGAITGEVK--QKHFV 597 >gi|156933919|ref|YP_001437835.1| hypothetical protein ESA_01745 [Cronobacter sakazakii ATCC BAA-894] gi|156532173|gb|ABU76999.1| hypothetical protein ESA_01745 [Cronobacter sakazakii ATCC BAA-894] Length = 205 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ E+ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|6644291|gb|AAF20994.1|AF208000_2 ferrodoxin [Pseudomonas syringae pv. syringae] Length = 38 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 23/36 (63%) Query: 68 KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 ++N+E A WPNIT KK+++P AA+ DG K Sbjct: 1 ELNAELAEIWPNITEKKDAMPDAAEWDGKTGKIADL 36 >gi|78223444|ref|YP_385191.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] gi|78194699|gb|ABB32466.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Geobacter metallireducens GS-15] Length = 371 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C C + CPV L I ++CI CG+C CP AI + Sbjct: 299 CIACGL--CAKRCPVRGVTSIMGPLHISEEKCIGCGLCVTTCPTQAISLKERQTYQEPFD 356 Query: 69 INSEYATQW 77 + W Sbjct: 357 TGRQLFAAW 365 >gi|320085202|emb|CBY94988.1| Protein nrfC Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 205 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|317054472|ref|YP_004118497.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pantoea sp. At-9b] gi|316952467|gb|ADU71941.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pantoea sp. At-9b] Length = 201 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ + C+ C +C CP AI+ Sbjct: 49 QLCRHCEDAPCASVCPVNAITRVDGAVQLNANLCVSCKLCGIACPFGAIEF 99 >gi|149375891|ref|ZP_01893658.1| iron-sulfur cluster-binding protein, putative [Marinobacter algicola DG893] gi|149359771|gb|EDM48228.1| iron-sulfur cluster-binding protein, putative [Marinobacter algicola DG893] Length = 659 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C++VCP + + + + I D C CG C CP AI + P Sbjct: 292 TRCLDVCPTEAIFSFGDHVQIDSDICAGCGSCAAVCPTSAITMNESP 338 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 ++ C LC CV +CP + + + + C+ CGVCE CP AI Sbjct: 512 SDKCTLCL--ACVSLCPTGALGDHPDRPEVQFTENACVQCGVCESTCPETAI 561 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 + I D+C C C CP A+ + + + N+ Sbjct: 508 IEIDSDKCTLCLACVSLCPTGALGDHPDRPEVQFTE-NA 545 >gi|123441922|ref|YP_001005905.1| tetrathionate reductase subunit B [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088883|emb|CAL11690.1| tetrathionate reductase subunit B [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 244 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + I C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVIDNTRCVGCAYCVQACPYEA 146 >gi|242239951|ref|YP_002988132.1| hydrogenase 2 protein HybA [Dickeya dadantii Ech703] gi|242132008|gb|ACS86310.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] Length = 338 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + +H D C C C CP + K D E Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALKKDPKTGVVHYDASICTGCRYCMVACPFNVPKYDYENP 172 Query: 63 L 63 L Sbjct: 173 L 173 >gi|168236599|ref|ZP_02661657.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736674|ref|YP_002113729.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712176|gb|ACF91397.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290426|gb|EDY29782.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 185 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|20093705|ref|NP_613552.1| heterodisulfide reductase, subunit A, polyferredoxin [Methanopyrus kandleri AV19] gi|41017082|sp|P96801|HDRA2_METKA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2 gi|1890204|emb|CAA70999.1| heterodisulfide reductase [Methanopyrus kandleri] gi|19886593|gb|AAM01482.1| Heterodisulfide reductase, subunit A, polyferredoxin [Methanopyrus kandleri AV19] Length = 656 Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 20/78 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL------------------AIHPDECIDCG 44 YV + C C C EVCP++ E + L I + CI CG Sbjct: 242 YVDEDACTGCG--ACAEVCPIEVPNEFDEGLGMRKAIYKPFPQAVPSVFTIDEEHCIRCG 299 Query: 45 VCEPECPVDAIKPDTEPG 62 +CE C DAI D EP Sbjct: 300 LCEEVCDADAIDFDQEPE 317 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLA--IHPDECIDCGVCEPECPVDAIKPDT 59 V E C C CVE+CP E + L + C CG C CP A++ + Sbjct: 581 VDEEICGGCG--TCVELCPYGAIELVEKDGKLVAEVTAALCKGCGTCAAACPSGAMEQNH 638 Query: 60 EPGLELWLKI 69 +L+ +I Sbjct: 639 FKTEQLYKQI 648 >gi|332162126|ref|YP_004298703.1| tetrathionate reductase subunit B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606176|emb|CBY27674.1| tetrathionate reductase subunit B [Yersinia enterocolitica subsp. palearctica Y11] gi|325666356|gb|ADZ43000.1| tetrathionate reductase subunit B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864031|emb|CBX74110.1| hypothetical protein YEW_AE00950 [Yersinia enterocolitica W22703] Length = 244 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + I C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVIDNTRCVGCAYCVQACPYEA 146 >gi|307131796|ref|YP_003883812.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Dickeya dadantii 3937] gi|306529325|gb|ADM99255.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Dickeya dadantii 3937] Length = 338 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + +H D C C C CP + K D E Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALKKDPKTGVVHYDASVCTGCRYCMVACPFNVPKYDYENP 172 Query: 63 L 63 L Sbjct: 173 L 173 >gi|293396834|ref|ZP_06641108.1| anaerobic dimethyl sulfoxide reductase subunit B [Serratia odorifera DSM 4582] gi|291420305|gb|EFE93560.1| anaerobic dimethyl sulfoxide reductase subunit B [Serratia odorifera DSM 4582] Length = 205 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSIACNHCEQPACTQVCPTGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|260773217|ref|ZP_05882133.1| electron transport complex protein RnfB [Vibrio metschnikovii CIP 69.14] gi|260612356|gb|EEX37559.1| electron transport complex protein RnfB [Vibrio metschnikovii CIP 69.14] Length = 195 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIEMIPL 164 Query: 58 DTEPGLELWLKINS 71 +T P W ++N+ Sbjct: 165 ETTPETWKW-QMNA 177 >gi|257790195|ref|YP_003180801.1| dimethylsulfoxide reductase, chain B [Eggerthella lenta DSM 2243] gi|257474092|gb|ACV54412.1| dimethylsulfoxide reductase, chain B [Eggerthella lenta DSM 2243] Length = 206 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ C C C+ CP + + + P++CI CG C CP A K D E Sbjct: 60 YYVSVACNHCDSPACMAKCPQGAISKDPDTGIVNNDPEKCIGCGTCAIACPYSAPKVDEE 119 >gi|167551945|ref|ZP_02345698.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323310|gb|EDZ11149.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|156974867|ref|YP_001445774.1| hypothetical protein VIBHAR_02586 [Vibrio harveyi ATCC BAA-1116] gi|156526461|gb|ABU71547.1| hypothetical protein VIBHAR_02586 [Vibrio harveyi ATCC BAA-1116] Length = 257 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ CV VCP Y+ E+ L + D+C CG C CP A Sbjct: 99 CNHCETPSCVPVCPTGATYKREDGLVLVDSDKCWGCGSCVTACPYGA 145 >gi|153002240|ref|YP_001367921.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|151366858|gb|ABS09858.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] Length = 260 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|84488976|ref|YP_447208.1| ferredoxin [Methanosphaera stadtmanae DSM 3091] gi|84372295|gb|ABC56565.1| ferredoxin [Methanosphaera stadtmanae DSM 3091] Length = 59 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + +NC+ C CV CP+D EG N I ++C+ CGVC CP AI+ Sbjct: 5 PYKINDNCVACGL--CVNACPIDAIAEG-NPYVIDEEKCVGCGVCAEACPTQAIEE 57 >gi|323701313|ref|ZP_08112988.1| nitrite and sulphite reductase 4Fe-4S region [Desulfotomaculum nigrificans DSM 574] gi|323533915|gb|EGB23779.1| nitrite and sulphite reductase 4Fe-4S region [Desulfotomaculum nigrificans DSM 574] Length = 232 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C +C CV CP DC GE I C++CG C +CP AIK Sbjct: 94 IGAGCTMCGL--CVAACPDDCIVLGEAGPIIDRQVCLNCGKCAAKCPTGAIK 143 >gi|261253250|ref|ZP_05945823.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio orientalis CIP 102891] gi|260936641|gb|EEX92630.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio orientalis CIP 102891] Length = 209 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + C +VCP + E + F+ + CI C C CP A + Sbjct: 62 AYYLSISCNHCTNPACTKVCPSGAMHKREEDGFVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|154498762|ref|ZP_02037140.1| hypothetical protein BACCAP_02753 [Bacteroides capillosus ATCC 29799] gi|150272152|gb|EDM99356.1| hypothetical protein BACCAP_02753 [Bacteroides capillosus ATCC 29799] Length = 447 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C T C++ CP + AI CIDCGVC CP AIK ++P Sbjct: 15 CRGC--TTCIKSCPTEAIRVRNGKAAILNARCIDCGVCIQVCPHKAIKSISDP 65 >gi|170726214|ref|YP_001760240.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811561|gb|ACA86145.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 682 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE-GENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C C++ CP + + E + P+ C CG C CP +A + D G Sbjct: 164 ISMACNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLDPVKG 223 Query: 63 L 63 Sbjct: 224 Q 224 >gi|11466585|ref|NP_066475.1| NADH dehydrogenase subunit 8 [Rhodomonas salina] gi|10444172|gb|AAG17746.1|AF288090_22 NADH dehydrogenase subunit 8 [Rhodomonas salina] Length = 162 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E+ I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIETESRADNSRKTSRYDIDMTKCIFCGLCQEACPVDAIV 118 Query: 57 PDTEPGLELWLKIN 70 ++ + N Sbjct: 119 EGPNYEYSVFKRQN 132 >gi|146291769|ref|YP_001182193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563459|gb|ABP74394.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 260 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|67925387|ref|ZP_00518736.1| 4Fe-4S ferredoxin, iron-sulfur binding [Crocosphaera watsonii WH 8501] gi|67852761|gb|EAM48171.1| 4Fe-4S ferredoxin, iron-sulfur binding [Crocosphaera watsonii WH 8501] Length = 75 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DC + CPV C ++G ++ I D CIDCG+C CPV Sbjct: 1 MPHTIVTEVCEGI--ADCADACPVACIHDGPGKNIKGTDWYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAIAPEERPDLQK 72 >gi|270263094|ref|ZP_06191364.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia odorifera 4Rx13] gi|270042782|gb|EFA15876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia odorifera 4Rx13] Length = 205 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ CV+VCPV+ +N + ++ C+ C +C CP AI Sbjct: 51 CRQCEDAPCVQVCPVNAITHQDNAIVLNESLCVSCKLCGIACPFGAI 97 >gi|268324769|emb|CBH38357.1| conserved hypothetical protein, 4Fe-4S binding domain family [uncultured archaeon] Length = 133 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C++ C +VCP D + I + D+CI CG C C + AI D E Sbjct: 54 CRACEYPPCAKVCPTDALRLRKGGGVILNKDKCIGCGFCAQACIMGAIFWDDELD 108 >gi|332289328|ref|YP_004420180.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] gi|330432224|gb|AEC17283.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] Length = 241 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV + + + + I + C+ C C CP DA I +T+ + Sbjct: 97 CNHCDNPPCVPVCPVQATYQQKDGIVVIDNERCVGCAYCVQACPYDARFINEETKTADK 155 >gi|310828875|ref|YP_003961232.1| hypothetical protein ELI_3307 [Eubacterium limosum KIST612] gi|308740609|gb|ADO38269.1| hypothetical protein ELI_3307 [Eubacterium limosum KIST612] Length = 586 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 2 TYVVTEN-CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 TY + E C+ C T C + CPV+ + I ++CI CG C C DA+ D Sbjct: 530 TYSIDEEKCVGC--TRCAKNCPVEAISGAPKKVHVIDQEKCIKCGKCASVCKFDAVTVD 586 >gi|296134042|ref|YP_003641289.1| NADH dehydrogenase (quinone) [Thermincola sp. JR] gi|296032620|gb|ADG83388.1| NADH dehydrogenase (quinone) [Thermincola potens JR] Length = 595 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ E C C C CPV I P++C C C +CP AI+ Sbjct: 543 IIPEECKKCGL--CARECPVGAIKGKPRETHEIDPEKCTKCEACLKKCPFGAIR 594 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +VCP + + + I P+EC CG+C ECPV AIK Sbjct: 528 KVCPAG-VCKKLSRIRIIPEECKKCGLCARECPVGAIK 564 >gi|283787133|ref|YP_003366998.1| hydrogenase-2 subunit [Citrobacter rodentium ICC168] gi|282950587|emb|CBG90256.1| hydrogenase-2 subunit [Citrobacter rodentium ICC168] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYNKDVCTGCRYCMVACPYNVPKYD 163 >gi|152992104|ref|YP_001357825.1| 4Fe-4S ferredoxin [Sulfurovum sp. NBC37-1] gi|151423965|dbj|BAF71468.1| 4Fe-4S ferredoxin [Sulfurovum sp. NBC37-1] Length = 251 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C +CPV + EN + + CI C C CP AI D E Sbjct: 57 CNHCESAPCERICPVSALHYLENGIVNVDSSRCIGCAGCMMACPYGAIYMDPE 109 Score = 40.5 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 14/72 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V + CI C C+ CP Y D+C C C CPV A Sbjct: 84 VDSSRCIGCAG--CMMACPYGAIYMDPETNT--ADKCTYCAHRIESGMMPACVVICPVQA 139 Query: 55 -IKPDTEPGLEL 65 I D + Sbjct: 140 NIFGDIDDDTSH 151 >gi|71909583|ref|YP_287170.1| hydrogenase 2 protein HybA [Dechloromonas aromatica RCB] gi|71849204|gb|AAZ48700.1| Twin-arginine translocation pathway signal [Dechloromonas aromatica RCB] Length = 351 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEG-ENFLA-IHPDECIDCGVCEPECPVD 53 +C+ C CV CPV + E + PD CI C C CP Sbjct: 114 SCMHCADPSCVSACPVSAMTKNLETGIVGYDPDACIGCRYCVAACPFG 161 >gi|297544307|ref|YP_003676609.1| Fe-S cluster domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842082|gb|ADH60598.1| Fe-S cluster domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 435 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 12 DRCRGC--TNCIKRCPTEAIRVRDGKARIINERCIDCGECIRVCPYHA 57 >gi|257068147|ref|YP_003154402.1| formate dehydrogenase beta subunit [Brachybacterium faecium DSM 4810] gi|256558965|gb|ACU84812.1| formate dehydrogenase beta subunit [Brachybacterium faecium DSM 4810] Length = 333 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++ C C + C++VCP + E+ + + D C CG C CP I+ + + Sbjct: 138 SDVCKHCTNAGCLDVCPTGAIFRSEHGSVVVQEDVCNGCGTCVSACPFGVIERRDDGTVS 197 Query: 65 LW 66 + Sbjct: 198 PY 199 >gi|220915989|ref|YP_002491293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953843|gb|ACL64227.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 310 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C+ C+E CP E + I PD C CG C CP + Sbjct: 127 SDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVV 177 >gi|78355523|ref|YP_386972.1| electron transport protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217928|gb|ABB37277.1| electron transport protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 164 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C +CP E + + CI C +C CPV AI+ Sbjct: 59 CRQCADAPCAAICPRGAIRMAEGVVTVDSGLCIGCKMCMVACPVGAIE 106 >gi|270297051|ref|ZP_06203250.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273038|gb|EFA18901.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 486 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I D CI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAIVY 171 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E + I +CI CG C CP Sbjct: 152 DACISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEKGIEHIDESKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|20807374|ref|NP_622545.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Thermoanaerobacter tengcongensis MB4] gi|254478307|ref|ZP_05091687.1| Respiratory-chain NADH dehydrogenase 51 Kd subunit family [Carboxydibrachium pacificum DSM 12653] gi|20515893|gb|AAM24149.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Thermoanaerobacter tengcongensis MB4] gi|214035772|gb|EEB76466.1| Respiratory-chain NADH dehydrogenase 51 Kd subunit family [Carboxydibrachium pacificum DSM 12653] Length = 596 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 +++V+ E C C C + CPV I ++CI CG C +CP AI Sbjct: 539 LSFVIDPEKCKACG--ICAKNCPVGAISGKPKTPYVIDQEKCIKCGTCIDKCPFGAIY 594 >gi|238789244|ref|ZP_04633031.1| Tetrathionate reductase subunit B [Yersinia frederiksenii ATCC 33641] gi|238722576|gb|EEQ14229.1| Tetrathionate reductase subunit B [Yersinia frederiksenii ATCC 33641] Length = 244 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + I C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVIDNTRCVGCAYCVQACPYEA 146 >gi|332299925|ref|YP_004441846.1| Ferredoxin hydrogenase [Porphyromonas asaccharolytica DSM 20707] gi|332176988|gb|AEE12678.1| Ferredoxin hydrogenase [Porphyromonas asaccharolytica DSM 20707] Length = 499 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP C +N I + CI CG C CP AI Sbjct: 115 YEVSNLCRGCVSRACSSNCPKSCISFKKNGQAQIDHEICISCGQCHKNCPYHAIVY 170 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 E CI C C E CPV + E+ + I +CI CG C CP Sbjct: 151 EICISCGQCHKNCPYHAIVYIPVPCEESCPVGAISKDEDGIEHIDESKCIYCGSCLNACP 210 Query: 52 VDAIKP 57 AI Sbjct: 211 FGAIFE 216 >gi|317486152|ref|ZP_07944996.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922601|gb|EFV43843.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 265 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C++ CV VCP F + + + P CI C C CP A + Sbjct: 128 CNHCENPPCVRVCPTAATFKREDGIVVMDPHRCIGCRFCMAGCPFGARSFNFRDPQPYVK 187 Query: 68 KINSEYATQWPNITTKK 84 +N E+ + + K Sbjct: 188 DVNPEFPMRTRGVVEKC 204 >gi|331664613|ref|ZP_08365519.1| hydrogenase-2 operon protein HybA [Escherichia coli TA143] gi|331058544|gb|EGI30525.1| hydrogenase-2 operon protein HybA [Escherichia coli TA143] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|262372076|ref|ZP_06065355.1| electron transport complex protein [Acinetobacter junii SH205] gi|262312101|gb|EEY93186.1| electron transport complex protein [Acinetobacter junii SH205] Length = 266 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGL 63 + CI C T C+ CPVD G+ I D C C +C P CPVD I PD P Sbjct: 93 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCIDLVPDNNPIP 150 Query: 64 ELWLKINSE 72 +IN + Sbjct: 151 TEDQRINEQ 159 Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 90 IREDECIGCTKCISACPVDAI 110 >gi|260769814|ref|ZP_05878747.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio furnissii CIP 102972] gi|260615152|gb|EEX40338.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio furnissii CIP 102972] gi|315182188|gb|ADT89101.1| dimethylsulfoxide reductase, chain B [Vibrio furnissii NCTC 11218] Length = 209 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + CV+VCP ++ + + + CI C C CP A + Sbjct: 62 AYYLSISCNHCSNPACVKVCPSGAMHKRDEDGLVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|50842000|ref|YP_055227.1| anaerobic dimethyl sulfoxide reductase, chain B [Propionibacterium acnes KPA171202] gi|289424433|ref|ZP_06426216.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes SK187] gi|289428460|ref|ZP_06430146.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes J165] gi|295130080|ref|YP_003580743.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes SK137] gi|50839602|gb|AAT82269.1| anaerobic dimethyl sulfoxide reductase, chain B [Propionibacterium acnes KPA171202] gi|289155130|gb|EFD03812.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes SK187] gi|289158432|gb|EFD06649.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes J165] gi|291377031|gb|ADE00886.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes SK137] gi|313772641|gb|EFS38607.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL074PA1] gi|313792894|gb|EFS40961.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL110PA1] gi|313802652|gb|EFS43874.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL110PA2] gi|313806667|gb|EFS45174.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL087PA2] gi|313810863|gb|EFS48577.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL083PA1] gi|313814626|gb|EFS52340.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL025PA1] gi|313817210|gb|EFS54924.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL046PA2] gi|313821728|gb|EFS59442.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL036PA1] gi|313824381|gb|EFS62095.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL036PA2] gi|313826739|gb|EFS64453.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL063PA1] gi|313831983|gb|EFS69697.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL007PA1] gi|313834477|gb|EFS72191.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL056PA1] gi|313840290|gb|EFS78004.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL086PA1] gi|314926833|gb|EFS90664.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL036PA3] gi|314961261|gb|EFT05362.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL002PA2] gi|314964311|gb|EFT08411.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL082PA1] gi|314974479|gb|EFT18574.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL053PA1] gi|314977330|gb|EFT21425.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL045PA1] gi|314980513|gb|EFT24607.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL072PA2] gi|314985570|gb|EFT29662.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL005PA1] gi|314987527|gb|EFT31618.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL005PA2] gi|314989008|gb|EFT33099.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL005PA3] gi|315078673|gb|EFT50704.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL053PA2] gi|315081867|gb|EFT53843.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL078PA1] gi|315086349|gb|EFT58325.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL002PA3] gi|315087598|gb|EFT59574.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL072PA1] gi|315097548|gb|EFT69524.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL038PA1] gi|315106566|gb|EFT78542.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL030PA1] gi|327331599|gb|EGE73338.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL096PA2] gi|327333581|gb|EGE75301.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL096PA3] gi|327335107|gb|EGE76818.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL097PA1] gi|327445391|gb|EGE92045.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL013PA2] gi|327447006|gb|EGE93660.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL043PA1] gi|327449958|gb|EGE96612.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL043PA2] gi|327456851|gb|EGF03506.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL092PA1] gi|328758637|gb|EGF72253.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL020PA1] gi|328761729|gb|EGF75244.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL099PA1] gi|332674921|gb|AEE71737.1| anaerobic dimethyl sulfoxide reductase chain B [Propionibacterium acnes 266] Length = 213 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 TY + +C C+ C++VCP ++ + + D+C+ C CE CP A + Sbjct: 68 TYYTSVSCNHCEDPICMKVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQY 124 >gi|294636934|ref|ZP_06715260.1| anaerobic dimethyl sulfoxide reductase, B subunit [Edwardsiella tarda ATCC 23685] gi|291089852|gb|EFE22413.1| anaerobic dimethyl sulfoxide reductase, B subunit [Edwardsiella tarda ATCC 23685] Length = 121 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C CV+VCP ++ E+ F+ + CI C C CP A + + + Sbjct: 60 AYYLSISCNHCDDPACVKVCPSGAMHKREDGFVVVDESVCIGCRYCHMACPYGAPQYNAQ 119 Query: 61 PG 62 G Sbjct: 120 KG 121 >gi|289578036|ref|YP_003476663.1| Fe-S cluster domain protein [Thermoanaerobacter italicus Ab9] gi|289527749|gb|ADD02101.1| Fe-S cluster domain protein [Thermoanaerobacter italicus Ab9] Length = 435 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I + CIDCG C CP A Sbjct: 12 DRCRGC--TNCIKRCPTEAIRVRDGKARIINERCIDCGECIRVCPYHA 57 >gi|225570605|ref|ZP_03779630.1| hypothetical protein CLOHYLEM_06707 [Clostridium hylemonae DSM 15053] gi|225160618|gb|EEG73237.1| hypothetical protein CLOHYLEM_06707 [Clostridium hylemonae DSM 15053] Length = 628 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V++ E C C + C CP + I CI CG CE C AI + Sbjct: 572 FVISPERCRGC--SKCARNCPAGAISGKIKEPYVIDDTRCIKCGACESACAFGAIHIE 627 Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 13/55 (23%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +VV + C+ C I P+ C C C CP AI Sbjct: 553 MEHVVEKKCVS-------HTC------TALRRFVISPERCRGCSKCARNCPAGAI 594 >gi|315082639|gb|EFT54615.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL027PA2] Length = 213 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 TY + +C C+ C++VCP ++ + + D+C+ C CE CP A + Sbjct: 68 TYYTSVSCNHCEDPICMKVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQY 124 >gi|312968672|ref|ZP_07782881.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli 2362-75] gi|312286890|gb|EFR14801.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli 2362-75] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|237706257|ref|ZP_04536738.1| hydrogenase-2 operon protein hybA [Escherichia sp. 3_2_53FAA] gi|226899297|gb|EEH85556.1| hydrogenase-2 operon protein hybA [Escherichia sp. 3_2_53FAA] gi|323957853|gb|EGB53567.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|288549934|ref|ZP_05968681.2| putative polyferredoxin [Enterobacter cancerogenus ATCC 35316] gi|288317249|gb|EFC56187.1| putative polyferredoxin [Enterobacter cancerogenus ATCC 35316] Length = 290 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 5 VTENCI-----LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ C +VCP F + + I P CI+CG C CP DAI Sbjct: 11 VTQACVRRRFRHASCHACADVCPAQAFSVTDGQVTIDPSRCIECGDCLFVCPTDAI 66 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDTEPG 62 TE CILC C CP +N L + C CG CE CP AIK + E Sbjct: 189 TEKCILCG--ACWRSCPEKAIRFEDNALVMENARCTGCGGCEAVCPSHAIKVMPAEGEAQ 246 Query: 63 LELWLK 68 W Sbjct: 247 QHTWEA 252 Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEP 61 ++CI CG C CP AI+ + Sbjct: 188 DTEKCILCGACWRSCPEKAIRFEDNA 213 >gi|182420185|ref|ZP_02951416.1| iron-sulfur cluster-binding protein [Clostridium butyricum 5521] gi|237667529|ref|ZP_04527513.1| iron-sulfur cluster-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375987|gb|EDT73577.1| iron-sulfur cluster-binding protein [Clostridium butyricum 5521] gi|237655877|gb|EEP53433.1| iron-sulfur cluster-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 421 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG----ENFLAIHPDECIDCGVCEPECPVDAIK 56 YV T CI C C +CP++ + + + C+ CGVC CP DAIK Sbjct: 287 PYVDTHKCIGCG--KCTNICPMEAIGVTTIGKDKYAKVDDKLCLGCGVCVKNCPKDAIK 343 >gi|82778235|ref|YP_404584.1| hydrogenase 2 protein HybA [Shigella dysenteriae Sd197] gi|309785172|ref|ZP_07679803.1| twin-arginine translocation pathway signal sequence domain protein [Shigella dysenteriae 1617] gi|81242383|gb|ABB63093.1| hydrogenase-2 small subunit [Shigella dysenteriae Sd197] gi|308926292|gb|EFP71768.1| twin-arginine translocation pathway signal sequence domain protein [Shigella dysenteriae 1617] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|323978928|gb|EGB74008.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|313896777|ref|ZP_07830325.1| putative formate dehydrogenase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312974694|gb|EFR40161.1| putative formate dehydrogenase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 274 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 NC C + C CP + N + I+ D+CI C CE CP K D Sbjct: 76 NCFHCGNPACAAGCPANAIDRNPNGTVVINEDKCIGCHYCEHNCPWHIPKIDE 128 >gi|291544150|emb|CBL17259.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus sp. 18P13] Length = 475 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 Y VT C C C +VC + I +C +CG C CP AI Sbjct: 91 YEVTNACRGCLAHRCEDVCRFGAITFDYQHVAHIDKSKCKNCGACAKVCPYTAI 144 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 I C+ C C + + EN A I D+CI CG C +CP AI Sbjct: 144 INCRRRPCENACKIKALHMNENKAAAIDNDKCISCGACVYQCPFGAI 190 >gi|218691287|ref|YP_002399499.1| hydrogenase 2 protein HybA [Escherichia coli ED1a] gi|218428851|emb|CAR09652.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli ED1a] Length = 328 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|168229880|ref|ZP_02654938.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471724|ref|ZP_03077708.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238911729|ref|ZP_04655566.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194458088|gb|EDX46927.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335482|gb|EDZ22246.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 205 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNEA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|78212933|ref|YP_381712.1| ferredoxin [Synechococcus sp. CC9605] gi|260436274|ref|ZP_05790244.1| conserved domain protein [Synechococcus sp. WH 8109] gi|78197392|gb|ABB35157.1| ferredoxin [Synechococcus sp. CC9605] gi|260414148|gb|EEX07444.1| conserved domain protein [Synechococcus sp. WH 8109] Length = 74 Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCF-------YEGENFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +G +F I+ D CIDCG+C CPV Sbjct: 1 MAHSIVTDVCEGI--ADCVDACPVACIDQGKGKNKKGTDFYWINFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAIVAEERPDLQK 72 >gi|325957816|ref|YP_004289282.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329248|gb|ADZ08310.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 368 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ E C C C + CPV F + AI+ D+CI C C CP + IK + + Sbjct: 190 IINEGCNSCG--RCADSCPVSAFEISKAGAAINYDKCIACNNCLGACPDELIKLNWS-TM 246 Query: 64 ELWLKINSEYA 74 E +++ +EYA Sbjct: 247 EEFIERMTEYA 257 >gi|314922143|gb|EFS85974.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL001PA1] gi|314965227|gb|EFT09326.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL082PA2] gi|314982363|gb|EFT26456.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL110PA3] gi|315092595|gb|EFT64571.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL110PA4] gi|315093987|gb|EFT65963.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL060PA1] gi|315104583|gb|EFT76559.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL050PA2] gi|327329517|gb|EGE71277.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL103PA1] Length = 213 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 TY + +C C+ C++VCP ++ + + D+C+ C CE CP A + Sbjct: 68 TYYTSVSCNHCEDPICMKVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQY 124 >gi|298245739|ref|ZP_06969545.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Ktedonobacter racemifer DSM 44963] gi|297553220|gb|EFH87085.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Ktedonobacter racemifer DSM 44963] Length = 601 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 22/67 (32%) Query: 9 CILCKHTDCVEVCPVDCFY--------------------EGENFLAIHPDECIDCGVCEP 48 CILC CV++CP DC EG + I ++CI CG+C Sbjct: 513 CILCSG--CVDICPYDCISMEGLSRVVKGDPMHQGTSTWEGGADMIIDEEKCIRCGLCVV 570 Query: 49 ECPVDAI 55 CP DAI Sbjct: 571 RCPTDAI 577 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 11/24 (45%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P CI C C CP D I + Sbjct: 508 IDPSICILCSGCVDICPYDCISME 531 >gi|226329427|ref|ZP_03804945.1| hypothetical protein PROPEN_03332 [Proteus penneri ATCC 35198] gi|225202613|gb|EEG84967.1| hypothetical protein PROPEN_03332 [Proteus penneri ATCC 35198] Length = 186 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C VCP +++ + ++CI C C CP ++ + P + Sbjct: 63 CHQCEDAPCANVCPNGAIIHNKDYYYVDQEKCIGCKTCVLACPYGTMEVVSRPVMRKSTA 122 Query: 69 IN 70 +N Sbjct: 123 LN 124 >gi|212711736|ref|ZP_03319864.1| hypothetical protein PROVALCAL_02811 [Providencia alcalifaciens DSM 30120] gi|212685838|gb|EEB45366.1| hypothetical protein PROVALCAL_02811 [Providencia alcalifaciens DSM 30120] Length = 208 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C C +VCP ++ E+ F+ + CI C C CP A + D Sbjct: 63 AYYLSISCNHCDDPACAKVCPSGAMHKREDGFVVVDEAVCIGCRYCSMACPYGAPQFD 120 >gi|305665378|ref|YP_003861665.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Maribacter sp. HTCC2170] gi|88710133|gb|EAR02365.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Maribacter sp. HTCC2170] Length = 373 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 C C + CV+VCPV + E + + I D C+ C C CP D Sbjct: 229 CFHCDNPPCVDVCPVQATWREDDGLVVIDYDWCVGCRYCMAACPYD 274 >gi|238783741|ref|ZP_04627760.1| Tetrathionate reductase subunit B [Yersinia bercovieri ATCC 43970] gi|238715292|gb|EEQ07285.1| Tetrathionate reductase subunit B [Yersinia bercovieri ATCC 43970] Length = 244 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + I C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVIDNTRCVGCAYCVQACPYEA 146 >gi|126172840|ref|YP_001048989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125996045|gb|ABN60120.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 260 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C+ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCEKPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|325498551|gb|EGC96410.1| hydrogenase 2 protein HybA [Escherichia fergusonii ECD227] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|261403278|ref|YP_003247502.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370271|gb|ACX73020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 137 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C+ CP + N + + ++CI CG+C CP AI+ D Sbjct: 33 CMHCDKNPCLYACPENAIERINNKVVVIEEKCIGCGLCALACPFGAIRID 82 >gi|240102880|ref|YP_002959189.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] gi|239910434|gb|ACS33325.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] Length = 204 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y V NC C++ C+EVCP ++ E+ + +CI C +C CP + DT Sbjct: 60 AYNVPMNCRHCENAPCMEVCPTGAIFKDEDGAVLVDTSKCIGCKMCAIVCPFGIPEFDT 118 >gi|15679732|ref|NP_276850.1| pyruvate ferredoxin oxidoreductase subunit gamma/delta [Methanothermobacter thermautotrophicus str. Delta H] gi|2622871|gb|AAB86210.1| pyruvate oxidoreductase, gamma subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 261 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C +C+ CP C I D C CG+C +CPV AIK + E Sbjct: 212 DKCIDCD--NCILFCPEGCINREHE---IDYDYCKGCGICAEKCPVKAIKMERE 260 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + D+CIDC C CP I + E Sbjct: 208 VLDKDKCIDCDNCILFCPEGCINREHEID 236 >gi|315657349|ref|ZP_07910231.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491821|gb|EFU81430.1| anaerobic dimethyl sulfoxide reductase subunit B [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 212 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C++ C+EVCP ++ + + +C+ C C+ CP A + + E Sbjct: 67 AYYVSISCNHCEYPVCMEVCPTTAMSRRKDGTVYVDESKCVGCRYCQWACPYGAPQLNPE 126 Query: 61 PGL 63 G Sbjct: 127 TGH 129 >gi|310658147|ref|YP_003935868.1| hydrogenase, 4fe-4S ferredoxin-type component [Clostridium sticklandii DSM 519] gi|308824925|emb|CBH20963.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Clostridium sticklandii] Length = 185 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK--PDTEPGLE 64 C C+ C CPV+ + +N + + CI C C CP A++ P+ + E Sbjct: 65 CRHCEDAPCANSCPVNAIKKVDNAIVVDEKLCIGCKTCILACPFGALELLPEYKEAQE 122 >gi|307625400|gb|ADN69704.1| hydrogenase 2 protein HybA [Escherichia coli UM146] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|168235580|ref|ZP_02660638.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736681|ref|YP_002114513.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712183|gb|ACF91404.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291183|gb|EDY30536.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|220918377|ref|YP_002493681.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956231|gb|ACL66615.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 273 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++ V + C C+ T C++VCPV Y + + + CI C C CP Sbjct: 139 SFFVPKMCNHCRETPCIQVCPVGASYRTPDGAVLVDGERCIGCAYCVQACPFG 191 >gi|146739152|gb|ABQ42611.1| HycB [Enterobacter aerogenes] Length = 203 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QMCHHCEDAPCAAVCPVNAINRVDGAVQLNESLCVSCKLCAIACPFGAIEF 99 >gi|145592049|ref|YP_001154051.1| thiamine pyrophosphate binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283817|gb|ABP51399.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Pyrobaculum arsenaticum DSM 13514] Length = 604 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 E CI C C + + I P C+ CG+C CPVDAIK D Sbjct: 541 EKCIGCG--ICYNLLKCSAIQARPDRKAYIDPALCVGCGMCAEVCPVDAIKGD 591 >gi|170018745|ref|YP_001723699.1| hydrogenase 2 protein HybA [Escherichia coli ATCC 8739] gi|312972740|ref|ZP_07786913.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli 1827-70] gi|169753673|gb|ACA76372.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|310332682|gb|EFP99895.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli 1827-70] gi|323941901|gb|EGB38080.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|86157250|ref|YP_464035.1| formate dehydrogenase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85773761|gb|ABC80598.1| formate dehydrogenase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 310 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C+ C+E CP E + I PD C CG C CP + Sbjct: 127 SDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVV 177 >gi|33595708|ref|NP_883351.1| tetrathionate reductase subunit B [Bordetella parapertussis 12822] gi|33565787|emb|CAE36331.1| tetrathionate reductase subunit B [Bordetella parapertussis] Length = 257 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + + C+ CG C CP DA I +T+ + Sbjct: 113 CNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 171 >gi|16760365|ref|NP_455982.1| dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141871|ref|NP_805213.1| dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213420773|ref|ZP_03353839.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213609856|ref|ZP_03369682.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213865404|ref|ZP_03387523.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25285318|pir||AG0680 probable dimethyl sulphoxide reductase chain STY1567 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502660|emb|CAD01816.1| putative dimethyl sulphoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29137499|gb|AAO69062.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|26249564|ref|NP_755604.1| hydrogenase 2 protein HybA [Escherichia coli CFT073] gi|91212410|ref|YP_542396.1| hydrogenase 2 protein HybA [Escherichia coli UTI89] gi|117625301|ref|YP_854502.1| hydrogenase 2 protein HybA [Escherichia coli APEC O1] gi|191172476|ref|ZP_03034016.1| hydrogenase-2 electron transfer subunit [Escherichia coli F11] gi|215488322|ref|YP_002330753.1| hydrogenase 2 protein HybA [Escherichia coli O127:H6 str. E2348/69] gi|218550247|ref|YP_002384038.1| hydrogenase 2 protein HybA [Escherichia fergusonii ATCC 35469] gi|218560071|ref|YP_002392984.1| hydrogenase 2 protein HybA [Escherichia coli S88] gi|218706623|ref|YP_002414142.1| hydrogenase 2 protein HybA [Escherichia coli UMN026] gi|293406613|ref|ZP_06650539.1| hydrogenase 2 protein HybA [Escherichia coli FVEC1412] gi|293412374|ref|ZP_06655097.1| conserved hypothetical protein [Escherichia coli B354] gi|298382352|ref|ZP_06991949.1| hydrogenase 2 protein HybA [Escherichia coli FVEC1302] gi|306816661|ref|ZP_07450793.1| hydrogenase 2 protein HybA [Escherichia coli NC101] gi|331648787|ref|ZP_08349875.1| hydrogenase-2 operon protein HybA [Escherichia coli M605] gi|331659278|ref|ZP_08360220.1| hydrogenase-2 operon protein HybA [Escherichia coli TA206] gi|331684642|ref|ZP_08385234.1| hydrogenase-2 operon protein HybA [Escherichia coli H299] gi|26109972|gb|AAN82177.1|AE016766_265 Hydrogenase-2 operon protein hybA precursor [Escherichia coli CFT073] gi|91073984|gb|ABE08865.1| hydrogenase-2 operon protein HybA precursor [Escherichia coli UTI89] gi|115514425|gb|ABJ02500.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli APEC O1] gi|190907144|gb|EDV66743.1| hydrogenase-2 electron transfer subunit [Escherichia coli F11] gi|215266394|emb|CAS10831.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O127:H6 str. E2348/69] gi|218357788|emb|CAQ90432.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia fergusonii ATCC 35469] gi|218366840|emb|CAR04610.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli S88] gi|218433720|emb|CAR14637.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli UMN026] gi|222034719|emb|CAP77461.1| hydrogenase-2 operon protein hybA [Escherichia coli LF82] gi|281180037|dbj|BAI56367.1| hydrogenase-2 small subunit [Escherichia coli SE15] gi|291426619|gb|EFE99651.1| hydrogenase 2 protein HybA [Escherichia coli FVEC1412] gi|291469145|gb|EFF11636.1| conserved hypothetical protein [Escherichia coli B354] gi|294493161|gb|ADE91917.1| hydrogenase-2 electron transfer subunit [Escherichia coli IHE3034] gi|298277492|gb|EFI19008.1| hydrogenase 2 protein HybA [Escherichia coli FVEC1302] gi|305850226|gb|EFM50685.1| hydrogenase 2 protein HybA [Escherichia coli NC101] gi|312947557|gb|ADR28384.1| hydrogenase 2 protein HybA [Escherichia coli O83:H1 str. NRG 857C] gi|323188572|gb|EFZ73857.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli RN587/1] gi|323951481|gb|EGB47356.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323966527|gb|EGB61960.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|324114970|gb|EGC08935.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] gi|327251780|gb|EGE63466.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli STEC_7v] gi|330909053|gb|EGH37567.1| hydrogenase-2 operon protein hybA precursor [Escherichia coli AA86] gi|331042534|gb|EGI14676.1| hydrogenase-2 operon protein HybA [Escherichia coli M605] gi|331053860|gb|EGI25889.1| hydrogenase-2 operon protein HybA [Escherichia coli TA206] gi|331078257|gb|EGI49463.1| hydrogenase-2 operon protein HybA [Escherichia coli H299] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|238784037|ref|ZP_04628052.1| Electron transport protein hydN [Yersinia bercovieri ATCC 43970] gi|238715014|gb|EEQ07011.1| Electron transport protein hydN [Yersinia bercovieri ATCC 43970] Length = 158 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + + ++CI C C CP A Sbjct: 35 CRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 80 >gi|167994707|ref|ZP_02575798.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205327472|gb|EDZ14236.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|146284007|ref|YP_001174160.1| tetrathionate reductase subunit B [Pseudomonas stutzeri A1501] gi|145572212|gb|ABP81318.1| tetrathionate reductase subunit B [Pseudomonas stutzeri A1501] Length = 254 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + + + C+ CG C CP DA I +T+ + Sbjct: 110 CNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 168 >gi|56478640|ref|YP_160229.1| molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase [Aromatoleum aromaticum EbN1] gi|56314683|emb|CAI09328.1| Molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase [Aromatoleum aromaticum EbN1] Length = 200 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C+ CVEVCP ++ ++ + I PD+C+ C C CP + +P Sbjct: 57 CNHCEDPPCVEVCPTGASFKCDDGIVDIDPDKCVGCRTCMMACPYGNRYFNDKPQH 112 >gi|22299637|ref|NP_682884.1| ferredoxin-like protein [Thermosynechococcus elongatus BP-1] gi|22295821|dbj|BAC09646.1| ferredoxin-like protein [Thermosynechococcus elongatus BP-1] Length = 75 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT C DCVE CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MAHTIVTNTCEGV--ADCVEACPVACIHPGPGKNAKGTDWFWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI P+ P L+ Sbjct: 59 EGAIVPEERPDLQ 71 >gi|163847096|ref|YP_001635140.1| cyclic nucleotide-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222524931|ref|YP_002569402.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] gi|163668385|gb|ABY34751.1| cyclic nucleotide-binding [Chloroflexus aurantiacus J-10-fl] gi|222448810|gb|ACM53076.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] Length = 477 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V ++C C +CVEVCP D + + C CG C CP DA+ Sbjct: 353 VLDHCRQCSVGAECVEVCPEDAIERVDTGALRITNRCTGCGECVSACPYDAV 404 >gi|325299224|ref|YP_004259141.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324318777|gb|ADY36668.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] Length = 260 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V TENC C +CVEVCP EN + + CI C C CP A D Sbjct: 186 VCTENCFGCG--ECVEVCPTHAIRLNAENVIETDINRCIRCCACVKACPNGARVYDNP 241 >gi|320195146|gb|EFW69775.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli WV_060327] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|319901972|ref|YP_004161700.1| hydrogenase large subunit domain protein [Bacteroides helcogenes P 36-108] gi|319417003|gb|ADV44114.1| hydrogenase large subunit domain protein [Bacteroides helcogenes P 36-108] Length = 486 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I D CI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAIVY 171 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E + I +CI CG C CP Sbjct: 152 DACISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEKGIEHIDESKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|303248776|ref|ZP_07335028.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] gi|302489863|gb|EFL49792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] Length = 376 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C CV VCP + I CI CG C CP A++ D + +++ Sbjct: 202 CIGCGQ--CVAVCPAGAATMQDKKAFIEKAICIGCGECLTVCPKKAMRIDWHTEIVPFME 259 Query: 69 INSEYA 74 EYA Sbjct: 260 RLVEYA 265 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 3/36 (8%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + P +CI CG C CP A + + +++ Sbjct: 195 FVVEPKKCIGCGQCVAVCPAGAATMQDK---KAFIE 227 >gi|168819257|ref|ZP_02831257.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|198244390|ref|YP_002215640.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857002|ref|YP_002243653.1| anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197938906|gb|ACH76239.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205343729|gb|EDZ30493.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708805|emb|CAR33133.1| putative anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320086021|emb|CBY95795.1| Formate dehydrogenase-O, iron-sulfur subunit Formate dehydrogenase-O subunit beta; FDH-Z subunit beta; Aerobic formate dehydrogenase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326623386|gb|EGE29731.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|148239575|ref|YP_001224962.1| ferredoxin [Synechococcus sp. WH 7803] gi|147848114|emb|CAK23665.1| Ferredoxin [Synechococcus sp. WH 7803] Length = 74 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G+ +F I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGV--ADCVDACPVACIQPGKGKNKKGTDFYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 D AI + L+ Sbjct: 59 DGAILAEERSDLQK 72 >gi|120600302|ref|YP_964876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560395|gb|ABM26322.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 260 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ C+ VCP F + + ++ + C+ CG C CP DA I DT + Sbjct: 107 CNHCENPPCIPVCPTGATFQRKDGIVVVNNEWCVGCGYCVQACPYDARFINHDTNTADK 165 >gi|87124438|ref|ZP_01080287.1| ferredoxin [Synechococcus sp. RS9917] gi|86168010|gb|EAQ69268.1| ferredoxin [Synechococcus sp. RS9917] Length = 74 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G F I D CIDCG+C CPV Sbjct: 1 MAHTIVTDVCEGI--ADCVDACPVACIQPGRGRNKKGTEFYWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 D AI + L+ Sbjct: 59 DGAILAEERADLQ 71 >gi|299532215|ref|ZP_07045609.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] gi|298719877|gb|EFI60840.1| tetrathionate reductase subunit B [Comamonas testosteroni S44] Length = 250 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + + + C+ CG C CP DA I +T+ + Sbjct: 105 CNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 163 >gi|161502316|ref|YP_001569428.1| hypothetical protein SARI_00348 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863663|gb|ABX20286.1| hypothetical protein SARI_00348 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 209 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLND 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|197121285|ref|YP_002133236.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196171134|gb|ACG72107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 310 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C+ C+E CP E + I PD C CG C CP + Sbjct: 127 SDVCKHCERAGCLEACPTGAILRTEFGSVYIQPDVCNGCGYCVSACPFGVV 177 >gi|153836556|ref|ZP_01989223.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AQ3810] gi|149750154|gb|EDM60899.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AQ3810] Length = 209 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + C +VCP + E + F+ + CI C C CP A + Sbjct: 62 AYYLSISCNHCTNPACTKVCPSGAMHKREEDGFVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|62179489|ref|YP_215906.1| anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127122|gb|AAX64825.1| anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|16759836|ref|NP_455453.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764326|ref|NP_459941.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142391|ref|NP_805733.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413539|ref|YP_150614.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161614075|ref|YP_001588040.1| hypothetical protein SPAB_01814 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161614804|ref|YP_001588769.1| hypothetical protein SPAB_02556 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550363|ref|ZP_02344120.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168230859|ref|ZP_02655917.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240816|ref|ZP_02665748.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168241021|ref|ZP_02665953.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260336|ref|ZP_02682309.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168263549|ref|ZP_02685522.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466550|ref|ZP_02700412.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822934|ref|ZP_02834934.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442816|ref|YP_002040164.1| dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447792|ref|YP_002045535.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194449118|ref|YP_002044958.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470411|ref|ZP_03076395.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248038|ref|YP_002145883.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197249734|ref|YP_002146546.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262363|ref|ZP_03162437.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362464|ref|YP_002142101.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245763|ref|YP_002214889.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390940|ref|ZP_03217551.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927626|ref|ZP_03218827.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204930062|ref|ZP_03221083.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352173|ref|YP_002225974.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856357|ref|YP_002243008.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582775|ref|YP_002636573.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913260|ref|ZP_04657097.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25285315|pir||AC0612 anaerobic dimethyl sulfoxide reductase chain B [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419477|gb|AAL19900.1| anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502129|emb|CAD05365.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhi] gi|29138021|gb|AAO69582.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127796|gb|AAV77302.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161363439|gb|ABX67207.1| hypothetical protein SPAB_01814 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364168|gb|ABX67936.1| hypothetical protein SPAB_02556 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401479|gb|ACF61701.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406096|gb|ACF66315.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407422|gb|ACF67641.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456775|gb|EDX45614.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631045|gb|EDX49631.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093941|emb|CAR59431.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211741|gb|ACH49138.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213437|gb|ACH50834.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240618|gb|EDY23238.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940279|gb|ACH77612.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603385|gb|EDZ01931.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321056|gb|EDZ06257.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322968|gb|EDZ08164.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271954|emb|CAR36798.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324652|gb|EDZ12491.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334705|gb|EDZ21469.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339260|gb|EDZ26024.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339785|gb|EDZ26549.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340754|gb|EDZ27518.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347817|gb|EDZ34448.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205351194|gb|EDZ37825.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708160|emb|CAR32453.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467302|gb|ACN45132.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246182|emb|CBG23986.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992699|gb|ACY87584.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157509|emb|CBW16999.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911953|dbj|BAJ35927.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223289|gb|EFX48358.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713958|gb|EFZ05529.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129231|gb|ADX16661.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622642|gb|EGE28987.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627217|gb|EGE33560.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987857|gb|AEF06840.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|15833135|ref|NP_311908.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 str. Sakai] gi|16130896|ref|NP_417470.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. MG1655] gi|24114304|ref|NP_708814.1| hydrogenase 2 protein HybA [Shigella flexneri 2a str. 301] gi|30064351|ref|NP_838522.1| hydrogenase 2 protein HybA [Shigella flexneri 2a str. 2457T] gi|74313541|ref|YP_311960.1| hydrogenase 2 protein HybA [Shigella sonnei Ss046] gi|82545266|ref|YP_409213.1| hydrogenase 2 protein HybA [Shigella boydii Sb227] gi|89109771|ref|AP_003551.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. W3110] gi|110643236|ref|YP_670966.1| hydrogenase 2 protein HybA [Escherichia coli 536] gi|110806899|ref|YP_690419.1| hydrogenase 2 protein HybA [Shigella flexneri 5 str. 8401] gi|157159045|ref|YP_001464462.1| hydrogenase 2 protein HybA [Escherichia coli E24377A] gi|168747499|ref|ZP_02772521.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4113] gi|168753960|ref|ZP_02778967.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4401] gi|168760151|ref|ZP_02785158.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4501] gi|168767014|ref|ZP_02792021.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4486] gi|168773352|ref|ZP_02798359.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4196] gi|168781867|ref|ZP_02806874.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4076] gi|168785865|ref|ZP_02810872.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC869] gi|168797583|ref|ZP_02822590.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC508] gi|170082544|ref|YP_001731864.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. DH10B] gi|170679790|ref|YP_001745262.1| hydrogenase 2 protein HybA [Escherichia coli SMS-3-5] gi|170765746|ref|ZP_02900557.1| hydrogenase-2 electron transfer subunit [Escherichia albertii TW07627] gi|188496245|ref|ZP_03003515.1| hydrogenase-2 electron transfer subunit [Escherichia coli 53638] gi|191167535|ref|ZP_03029347.1| hydrogenase-2 electron transfer subunit [Escherichia coli B7A] gi|193062093|ref|ZP_03043189.1| hydrogenase-2 electron transfer subunit [Escherichia coli E22] gi|193067473|ref|ZP_03048441.1| hydrogenase-2 electron transfer subunit [Escherichia coli E110019] gi|194426277|ref|ZP_03058832.1| hydrogenase-2 electron transfer subunit [Escherichia coli B171] gi|194436749|ref|ZP_03068849.1| hydrogenase-2 electron transfer subunit [Escherichia coli 101-1] gi|195937142|ref|ZP_03082524.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 str. EC4024] gi|208805976|ref|ZP_03248313.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4206] gi|208813410|ref|ZP_03254739.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4045] gi|208821438|ref|ZP_03261758.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4042] gi|209398622|ref|YP_002272475.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4115] gi|209920472|ref|YP_002294556.1| hydrogenase 2 protein HybA [Escherichia coli SE11] gi|217326959|ref|ZP_03443042.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. TW14588] gi|218555570|ref|YP_002388483.1| hydrogenase 2 protein HybA [Escherichia coli IAI1] gi|218696706|ref|YP_002404373.1| hydrogenase 2 protein HybA [Escherichia coli 55989] gi|218701770|ref|YP_002409399.1| hydrogenase 2 protein HybA [Escherichia coli IAI39] gi|238902114|ref|YP_002927910.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli BW2952] gi|253772165|ref|YP_003034996.1| hydrogenase 2 protein HybA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038165|ref|ZP_04872223.1| hydrogenase-2 electron transfer subunit [Escherichia sp. 1_1_43] gi|254162950|ref|YP_003046058.1| hydrogenase 2 protein HybA [Escherichia coli B str. REL606] gi|254794953|ref|YP_003079790.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 str. TW14359] gi|256019080|ref|ZP_05432945.1| hydrogenase 2 protein HybA [Shigella sp. D9] gi|256024418|ref|ZP_05438283.1| hydrogenase 2 protein HybA [Escherichia sp. 4_1_40B] gi|260845757|ref|YP_003223535.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O103:H2 str. 12009] gi|260857136|ref|YP_003231027.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O26:H11 str. 11368] gi|260869757|ref|YP_003236159.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O111:H- str. 11128] gi|261228012|ref|ZP_05942293.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. FRIK2000] gi|261254869|ref|ZP_05947402.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. FRIK966] gi|291284379|ref|YP_003501197.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli O55:H7 str. CB9615] gi|293416441|ref|ZP_06659080.1| hydrogenase-2 operon protein hybA [Escherichia coli B185] gi|293449345|ref|ZP_06663766.1| hydrogenase-2 operon protein hybA [Escherichia coli B088] gi|297517180|ref|ZP_06935566.1| hydrogenase 2 protein HybA [Escherichia coli OP50] gi|301019948|ref|ZP_07184083.1| Tat pathway signal sequence [Escherichia coli MS 196-1] gi|307139686|ref|ZP_07499042.1| hydrogenase 2 protein HybA [Escherichia coli H736] gi|307310369|ref|ZP_07590017.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|331643698|ref|ZP_08344829.1| hydrogenase-2 operon protein HybA [Escherichia coli H736] gi|331654607|ref|ZP_08355607.1| hydrogenase-2 operon protein HybA [Escherichia coli M718] gi|331669980|ref|ZP_08370825.1| hydrogenase-2 operon protein HybA [Escherichia coli TA271] gi|331679072|ref|ZP_08379744.1| hydrogenase-2 operon protein HybA [Escherichia coli H591] gi|332280183|ref|ZP_08392596.1| hydrogenase-2 small subunit [Shigella sp. D9] gi|77417733|sp|P0AAJ9|HYBA_ECO57 RecName: Full=Hydrogenase-2 operon protein hybA; Flags: Precursor gi|77417734|sp|P0AAJ8|HYBA_ECOLI RecName: Full=Hydrogenase-2 operon protein hybA; Flags: Precursor gi|77417735|sp|P0AAK0|HYBA_SHIFL RecName: Full=Hydrogenase-2 operon protein hybA; Flags: Precursor gi|544483|gb|AAA21589.1| putative hydrogenase-2 small subunit [Escherichia coli] gi|882525|gb|AAA69163.1| hydrogenase-2 small subunit [Escherichia coli str. K-12 substr. MG1655] gi|1789370|gb|AAC76032.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. MG1655] gi|13363353|dbj|BAB37304.1| hydrogenase-2 small subunit [Escherichia coli O157:H7 str. Sakai] gi|24053461|gb|AAN44521.1| hydrogenase-2 small subunit [Shigella flexneri 2a str. 301] gi|30042608|gb|AAP18332.1| hydrogenase-2 small subunit [Shigella flexneri 2a str. 2457T] gi|73857018|gb|AAZ89725.1| hydrogenase-2 small subunit [Shigella sonnei Ss046] gi|81246677|gb|ABB67385.1| hydrogenase-2 small subunit [Shigella boydii Sb227] gi|85675804|dbj|BAE77057.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K12 substr. W3110] gi|110344828|gb|ABG71065.1| hydrogenase-2 operon protein HybA precursor [Escherichia coli 536] gi|110616447|gb|ABF05114.1| hydrogenase-2 small subunit [Shigella flexneri 5 str. 8401] gi|157081075|gb|ABV20783.1| hydrogenase-2 electron transfer subunit [Escherichia coli E24377A] gi|169890379|gb|ACB04086.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. DH10B] gi|170124892|gb|EDS93823.1| hydrogenase-2 electron transfer subunit [Escherichia albertii TW07627] gi|170517508|gb|ACB15686.1| hydrogenase-2 electron transfer subunit [Escherichia coli SMS-3-5] gi|187770783|gb|EDU34627.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4196] gi|188017775|gb|EDU55897.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4113] gi|188491444|gb|EDU66547.1| hydrogenase-2 electron transfer subunit [Escherichia coli 53638] gi|189000639|gb|EDU69625.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4076] gi|189358464|gb|EDU76883.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4401] gi|189363781|gb|EDU82200.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4486] gi|189369254|gb|EDU87670.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4501] gi|189374019|gb|EDU92435.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC869] gi|189379701|gb|EDU98117.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC508] gi|190902392|gb|EDV62129.1| hydrogenase-2 electron transfer subunit [Escherichia coli B7A] gi|192932313|gb|EDV84911.1| hydrogenase-2 electron transfer subunit [Escherichia coli E22] gi|192959430|gb|EDV89865.1| hydrogenase-2 electron transfer subunit [Escherichia coli E110019] gi|194415585|gb|EDX31852.1| hydrogenase-2 electron transfer subunit [Escherichia coli B171] gi|194424231|gb|EDX40218.1| hydrogenase-2 electron transfer subunit [Escherichia coli 101-1] gi|208725777|gb|EDZ75378.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4206] gi|208734687|gb|EDZ83374.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4045] gi|208741561|gb|EDZ89243.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4042] gi|209160022|gb|ACI37455.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. EC4115] gi|209759808|gb|ACI78216.1| hydrogenase-2 small subunit [Escherichia coli] gi|209759810|gb|ACI78217.1| hydrogenase-2 small subunit [Escherichia coli] gi|209759812|gb|ACI78218.1| hydrogenase-2 small subunit [Escherichia coli] gi|209759814|gb|ACI78219.1| hydrogenase-2 small subunit [Escherichia coli] gi|209759816|gb|ACI78220.1| hydrogenase-2 small subunit [Escherichia coli] gi|209913731|dbj|BAG78805.1| hydrogenase-2 small subunit [Escherichia coli SE11] gi|217319326|gb|EEC27751.1| hydrogenase-2 electron transfer subunit [Escherichia coli O157:H7 str. TW14588] gi|218353438|emb|CAU99515.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli 55989] gi|218362338|emb|CAQ99960.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli IAI1] gi|218371756|emb|CAR19609.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli IAI39] gi|226839789|gb|EEH71810.1| hydrogenase-2 electron transfer subunit [Escherichia sp. 1_1_43] gi|238861449|gb|ACR63447.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli BW2952] gi|242378552|emb|CAQ33338.1| hydrogenase 2 4Fe-4S ferredoxin-type component, subunit of hydrogenase 2 [Escherichia coli BL21(DE3)] gi|253323209|gb|ACT27811.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974851|gb|ACT40522.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli B str. REL606] gi|253979006|gb|ACT44676.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli BL21(DE3)] gi|254594353|gb|ACT73714.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. TW14359] gi|257755785|dbj|BAI27287.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O26:H11 str. 11368] gi|257760904|dbj|BAI32401.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O103:H2 str. 12009] gi|257766113|dbj|BAI37608.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli O111:H- str. 11128] gi|260447962|gb|ACX38384.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|281602387|gb|ADA75371.1| Hydrogenase-2 operon protein hybA precursor [Shigella flexneri 2002017] gi|284923023|emb|CBG36115.1| hydrogenase-2 subunit [Escherichia coli 042] gi|290764252|gb|ADD58213.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli O55:H7 str. CB9615] gi|291322435|gb|EFE61864.1| hydrogenase-2 operon protein hybA [Escherichia coli B088] gi|291431797|gb|EFF04780.1| hydrogenase-2 operon protein hybA [Escherichia coli B185] gi|299882046|gb|EFI90257.1| Tat pathway signal sequence [Escherichia coli MS 196-1] gi|306909264|gb|EFN39759.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309703432|emb|CBJ02771.1| hydrogenase-2 subunit [Escherichia coli ETEC H10407] gi|313648114|gb|EFS12560.1| twin-arginine translocation pathway signal sequence domain protein [Shigella flexneri 2a str. 2457T] gi|315062315|gb|ADT76642.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Escherichia coli W] gi|315137593|dbj|BAJ44752.1| hydrogenase-2 operon protein hybA precursor [Escherichia coli DH1] gi|315614999|gb|EFU95637.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli 3431] gi|320184207|gb|EFW59023.1| Hydrogenase-2 operon protein hybA precursor [Shigella flexneri CDC 796-83] gi|320189352|gb|EFW64011.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli O157:H7 str. EC1212] gi|320201912|gb|EFW76487.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli EC4100B] gi|320640073|gb|EFX09645.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 str. G5101] gi|320645371|gb|EFX14380.1| hydrogenase 2 protein HybA [Escherichia coli O157:H- str. 493-89] gi|320650684|gb|EFX19141.1| hydrogenase 2 protein HybA [Escherichia coli O157:H- str. H 2687] gi|320656378|gb|EFX24285.1| hydrogenase 2 protein HybA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661751|gb|EFX29159.1| hydrogenase 2 protein HybA [Escherichia coli O55:H7 str. USDA 5905] gi|320666902|gb|EFX33878.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 str. LSU-61] gi|323154695|gb|EFZ40894.1| twin-arginine translocation pathway signal sequence domain protein [Escherichia coli EPECa14] gi|323163052|gb|EFZ48885.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli E128010] gi|323168158|gb|EFZ53845.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella sonnei 53G] gi|323173759|gb|EFZ59388.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli LT-68] gi|323178706|gb|EFZ64282.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli 1180] gi|323183587|gb|EFZ68984.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli 1357] gi|323377100|gb|ADX49368.1| hydrogenase 2 protein HybA [Escherichia coli KO11] gi|323935999|gb|EGB32294.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323946755|gb|EGB42775.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|323960953|gb|EGB56572.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|324119612|gb|EGC13493.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|326337706|gb|EGD61540.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli O157:H7 str. 1125] gi|326347270|gb|EGD70995.1| Hydrogenase-2 operon protein hybA precursor [Escherichia coli O157:H7 str. 1044] gi|331037169|gb|EGI09393.1| hydrogenase-2 operon protein HybA [Escherichia coli H736] gi|331047989|gb|EGI20066.1| hydrogenase-2 operon protein HybA [Escherichia coli M718] gi|331062893|gb|EGI34807.1| hydrogenase-2 operon protein HybA [Escherichia coli TA271] gi|331073137|gb|EGI44460.1| hydrogenase-2 operon protein HybA [Escherichia coli H591] gi|332091947|gb|EGI97025.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella boydii 3594-74] gi|332102535|gb|EGJ05881.1| hydrogenase-2 small subunit [Shigella sp. D9] gi|332344955|gb|AEE58289.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Escherichia coli UMNK88] gi|332752673|gb|EGJ83058.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri K-671] gi|332753058|gb|EGJ83442.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri 4343-70] gi|332754735|gb|EGJ85101.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri 2747-71] gi|332765479|gb|EGJ95697.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri 2930-71] gi|332998941|gb|EGK18532.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri VA-6] gi|332999751|gb|EGK19335.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri K-272] gi|333000188|gb|EGK19771.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri K-218] gi|333014772|gb|EGK34117.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella flexneri K-304] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|325299905|ref|YP_004259822.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides salanitronis DSM 18170] gi|324319458|gb|ADY37349.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides salanitronis DSM 18170] Length = 297 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P +C C CE ECP AI Sbjct: 218 TAACIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCETECPQGAI 265 Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C + ++C CG C CP + I+ Sbjct: 142 CLGCGD--CVSACQFGAIRMNPETGLPEVDEEKCTACGACAKACPRNIIE 189 >gi|298375634|ref|ZP_06985591.1| protein HymB [Bacteroides sp. 3_1_19] gi|301310275|ref|ZP_07216214.1| protein HymB [Bacteroides sp. 20_3] gi|298268134|gb|EFI09790.1| protein HymB [Bacteroides sp. 3_1_19] gi|300831849|gb|EFK62480.1| protein HymB [Bacteroides sp. 20_3] Length = 596 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 ++ E C C T C VCPV G I P CI CG C +C AI Sbjct: 542 FINPEKCKGC--TLCARVCPVHAITGGRKIPHIIDPQACIRCGTCMEKCKFGAIY 594 Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I+P++C C +C CPV AI Sbjct: 540 QYFINPEKCKGCTLCARVCPVHAI 563 >gi|261248279|emb|CBG26116.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|237729926|ref|ZP_04560407.1| hydrogenase-2 small subunit [Citrobacter sp. 30_2] gi|226908532|gb|EEH94450.1| hydrogenase-2 small subunit [Citrobacter sp. 30_2] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|153831858|ref|ZP_01984525.1| dimethylsulfoxide reductase, chain B [Vibrio harveyi HY01] gi|260902011|ref|ZP_05910406.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AQ4037] gi|269963677|ref|ZP_06177999.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|148871856|gb|EDL70679.1| dimethylsulfoxide reductase, chain B [Vibrio harveyi HY01] gi|269831589|gb|EEZ85726.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|308107733|gb|EFO45273.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AQ4037] gi|328473766|gb|EGF44601.1| anaerobic dimethyl sulfoxide reductase subunit B [Vibrio parahaemolyticus 10329] Length = 209 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + C +VCP + E + F+ + CI C C CP A + Sbjct: 62 AYYLSISCNHCTNPACTKVCPSGAMHKREEDGFVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|126732222|ref|ZP_01748023.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] gi|126707304|gb|EBA06369.1| iron-sulfur cluster-binding protein [Sagittula stellata E-37] Length = 249 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP F E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASFKRTEDGIVLVNESDCIGCGLCAWACPYGARELDAAEG 137 >gi|124028465|ref|YP_001013785.1| indolepyruvate oxidoreductase subunit iorA [Hyperthermus butylicus DSM 5456] gi|123979159|gb|ABM81440.1| indolepyruvate oxidoreductase subunit iorA [Hyperthermus butylicus DSM 5456] Length = 651 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV E C C CP + + P C CGVC CP A KP ++P Sbjct: 580 YVDEEKCTACGICYTAFNCP--AIRRRPDGKAMVDPALCTGCGVCAQVCPFGAFKP-SQP 636 Query: 62 GLELWLKI 69 E WLKI Sbjct: 637 PSEEWLKI 644 >gi|33600231|ref|NP_887791.1| tetrathionate reductase subunit B [Bordetella bronchiseptica RB50] gi|33567829|emb|CAE31743.1| tetrathionate reductase subunit B [Bordetella bronchiseptica RB50] Length = 257 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + + C+ CG C CP DA I +T+ + Sbjct: 113 CNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 171 >gi|320180972|gb|EFW55893.1| Hydrogenase-2 operon protein hybA precursor [Shigella boydii ATCC 9905] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|315180297|gb|ADT87211.1| hydrogenase 4 Fe-S subunit [Vibrio furnissii NCTC 11218] Length = 201 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C+ C VCPV + E+ + + CI C +C CP AI D Sbjct: 51 CRHCEDAPCATVCPVHAIKKEEDRILLQETLCIGCTLCAVACPFGAIALD 100 >gi|227496205|ref|ZP_03926509.1| formate dehydrogenase beta subunit [Actinomyces urogenitalis DSM 15434] gi|226834258|gb|EEH66641.1| formate dehydrogenase beta subunit [Actinomyces urogenitalis DSM 15434] Length = 348 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 152 SDVCKHCTHAGCLDVCPTGALFRSEFGSVVVQADVCNGCGYCVAACPFGVI 202 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 23/81 (28%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE--------GENFLAI----HPDECIDC-------- 43 V + C C + CV CP G + I + +C C Sbjct: 182 VQADVCNGCGY--CVAACPFGVIDRREKGTITIGGHSEEISNGGNAQKCTLCYDRLKAGK 239 Query: 44 -GVCEPECPVDAIKPDTEPGL 63 C CP ++I+ + Sbjct: 240 RPACATNCPTESIQFGDHDEM 260 >gi|224584945|ref|YP_002638744.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469473|gb|ACN47303.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|156934092|ref|YP_001438008.1| hypothetical protein ESA_01918 [Cronobacter sakazakii ATCC BAA-894] gi|156532346|gb|ABU77172.1| hypothetical protein ESA_01918 [Cronobacter sakazakii ATCC BAA-894] Length = 209 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C CP + +G+ + ++ D+C+ CG C CP A + +T Sbjct: 71 AYTLSISCNHCADPICTRNCPTTAMHKRDGDGIVRVNTDKCVGCGYCAWSCPYGAPQRNT 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|16761927|ref|NP_457544.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766449|ref|NP_462064.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143414|ref|NP_806756.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415090|ref|YP_152165.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181660|ref|YP_218077.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616129|ref|YP_001590094.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990309|ref|ZP_02571409.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231741|ref|ZP_02656799.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238101|ref|ZP_02663159.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242968|ref|ZP_02667900.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262900|ref|ZP_02684873.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463650|ref|ZP_02697567.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819796|ref|ZP_02831796.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446005|ref|YP_002042413.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447754|ref|YP_002047144.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472018|ref|ZP_03078002.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736578|ref|YP_002116104.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248550|ref|YP_002148070.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265085|ref|ZP_03165159.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364019|ref|YP_002143656.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245843|ref|YP_002217126.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387105|ref|ZP_03213717.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928261|ref|ZP_03219461.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207858408|ref|YP_002245059.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161307|ref|ZP_03347017.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417308|ref|ZP_03350452.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213586280|ref|ZP_03368106.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213618584|ref|ZP_03372410.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648646|ref|ZP_03378699.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238909949|ref|ZP_04653786.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825343|ref|ZP_06544587.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25387630|pir||AE0885 hydrogenase-2 small chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421703|gb|AAL22023.1| unknown [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504229|emb|CAD02981.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29139048|gb|AAO70616.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129347|gb|AAV78853.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129293|gb|AAX66996.1| function unknown, intitally thought to be hydrogenase-2 small subunit which now identified as hybO [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365493|gb|ABX69261.1| hypothetical protein SPAB_03931 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404668|gb|ACF64890.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406058|gb|ACF66277.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458382|gb|EDX47221.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712080|gb|ACF91301.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633630|gb|EDX52044.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095496|emb|CAR61060.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212253|gb|ACH49650.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243340|gb|EDY25960.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289016|gb|EDY28387.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940359|gb|ACH77692.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604203|gb|EDZ02748.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322583|gb|EDZ07780.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205331109|gb|EDZ17873.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333855|gb|EDZ20619.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337793|gb|EDZ24557.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343282|gb|EDZ30046.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348510|gb|EDZ35141.1| hydrogenase-2 electron transfer subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710211|emb|CAR34568.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|267995331|gb|ACY90216.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159703|emb|CBW19222.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914173|dbj|BAJ38147.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087598|emb|CBY97362.1| Hydrogenase-2 operon protein hybA Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225826|gb|EFX50880.1| Hydrogenase-2 operon protein hybA precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613551|gb|EFY10492.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621143|gb|EFY18001.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624206|gb|EFY21040.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628055|gb|EFY24844.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633174|gb|EFY29916.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636249|gb|EFY32957.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639586|gb|EFY36274.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647482|gb|EFY43971.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648665|gb|EFY45112.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653719|gb|EFY50045.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657826|gb|EFY54094.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663928|gb|EFY60127.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669060|gb|EFY65211.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672945|gb|EFY69052.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678063|gb|EFY74126.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681240|gb|EFY77273.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687830|gb|EFY83797.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716144|gb|EFZ07715.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131506|gb|ADX18936.1| hydrogenase-2 subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195641|gb|EFZ80818.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199677|gb|EFZ84767.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202575|gb|EFZ87615.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207937|gb|EFZ92883.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212510|gb|EFZ97327.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215007|gb|EFZ99755.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222737|gb|EGA07102.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224181|gb|EGA08474.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230506|gb|EGA14624.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235143|gb|EGA19229.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239183|gb|EGA23233.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244460|gb|EGA28466.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247075|gb|EGA31041.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253443|gb|EGA37272.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256251|gb|EGA39987.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262574|gb|EGA46130.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267331|gb|EGA50815.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269266|gb|EGA52721.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624899|gb|EGE31244.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990014|gb|AEF08997.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|15803541|ref|NP_289574.1| hydrogenase 2 protein HybA [Escherichia coli O157:H7 EDL933] gi|25387625|pir||A85959 hydrogenase-2 small subunit [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12517560|gb|AAG58133.1|AE005529_11 hydrogenase-2 small subunit [Escherichia coli O157:H7 str. EDL933] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|187732487|ref|YP_001881759.1| hydrogenase 2 protein HybA [Shigella boydii CDC 3083-94] gi|187429479|gb|ACD08753.1| hydrogenase-2 electron transfer subunit [Shigella boydii CDC 3083-94] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|157162476|ref|YP_001459794.1| hydrogenase 2 protein HybA [Escherichia coli HS] gi|157068156|gb|ABV07411.1| hydrogenase-2 electron transfer subunit [Escherichia coli HS] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|302344389|ref|YP_003808918.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301641002|gb|ADK86324.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 356 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 V + C C+ C++ C + G++ LA I D CI CG+C CP +A+ + Sbjct: 273 AVVDKDACTGCE--TCLDRCQMKAIVMGDDGLARIDLDRCIGCGLCVTTCPTEALTLQAK 330 Query: 61 PGLEL 65 P +L Sbjct: 331 PSAQL 335 >gi|205351901|ref|YP_002225702.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856078|ref|YP_002242729.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205271682|emb|CAR36512.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707881|emb|CAR32169.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626939|gb|EGE33282.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 185 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|304314084|ref|YP_003849231.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] gi|302587543|gb|ADL57918.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] Length = 162 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C+ C VCP D + + P+ CI CG+C CP A+ + + Sbjct: 44 CQQCEDAPCRTVCPTDAIQD-----EVDPERCIGCGLCMLVCPFGAVVMEDRKAQK 94 >gi|282853588|ref|ZP_06262925.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes J139] gi|282583041|gb|EFB88421.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes J139] Length = 213 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 TY + +C C+ C++VCP ++ + + D+C+ C CE CP A + Sbjct: 68 TYYTSVSCNHCEDPICMKVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQY 124 >gi|269216722|ref|ZP_06160576.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] gi|269129867|gb|EEZ60950.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] Length = 177 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 VV C+ C+ C +VCP Y ++ + + P+ CI C C CP Sbjct: 53 VVPSQCMHCEDAPCQKVCPTHATYTTDDGVVLVDPERCIGCKYCMAACPYG 103 >gi|188586890|ref|YP_001918435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351577|gb|ACB85847.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 333 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Query: 4 VVTENCILCK----HTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E CI K D C CP + + + + P++C CG+C CP AIKP+ Sbjct: 19 VIQERCISYKMRLMDCDKCSRKCPQNAIKVRKGKVLLSPEDCSGCGICAGACPTHAIKPE 78 Query: 59 TEPGLELWLKI 69 + +I Sbjct: 79 NLNYHTKFKEI 89 >gi|164686661|ref|ZP_02210689.1| hypothetical protein CLOBAR_00256 [Clostridium bartlettii DSM 16795] gi|164604051|gb|EDQ97516.1| hypothetical protein CLOBAR_00256 [Clostridium bartlettii DSM 16795] Length = 622 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CPV E + I +CI CG C C DAI + Sbjct: 572 DKCKGC--TKCARNCPVGAITGEKKEAHVIDTTKCIKCGACMEGCKFDAIYAE 622 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I PD+C C C CPV AI + + Sbjct: 569 IDPDKCKGCTKCARNCPVGAITGEKKEAH 597 >gi|161506280|ref|YP_001573392.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867627|gb|ABX24250.1| hypothetical protein SARI_04476 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 328 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|322613255|gb|EFY10198.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621325|gb|EFY18182.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623744|gb|EFY20582.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629016|gb|EFY25795.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631738|gb|EFY28492.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637526|gb|EFY34228.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641866|gb|EFY38496.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646711|gb|EFY43217.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651411|gb|EFY47791.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653138|gb|EFY49472.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658858|gb|EFY55113.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664872|gb|EFY61065.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668874|gb|EFY65026.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670620|gb|EFY66753.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675361|gb|EFY71437.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682168|gb|EFY78193.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685001|gb|EFY80998.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193939|gb|EFZ79141.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197969|gb|EFZ83091.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201984|gb|EFZ87044.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207117|gb|EFZ92070.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211672|gb|EFZ96506.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214356|gb|EFZ99107.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221507|gb|EGA05921.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225551|gb|EGA09781.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231109|gb|EGA15225.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234059|gb|EGA18148.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238246|gb|EGA22304.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242520|gb|EGA26544.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248503|gb|EGA32437.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251281|gb|EGA35153.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259209|gb|EGA42852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261520|gb|EGA45099.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264799|gb|EGA48300.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272364|gb|EGA55771.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 185 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|256839949|ref|ZP_05545458.1| NADH oxidoreductase (quinone), F subunit [Parabacteroides sp. D13] gi|256738879|gb|EEU52204.1| NADH oxidoreductase (quinone), F subunit [Parabacteroides sp. D13] Length = 596 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 ++ E C C T C VCPV G I P CI CG C +C AI Sbjct: 542 FINPEKCKGC--TLCARVCPVHAITGGRKIPHIIDPQACIRCGTCMEKCKFGAIY 594 Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I+P++C C +C CPV AI Sbjct: 540 QYFINPEKCKGCTLCARVCPVHAI 563 >gi|212223691|ref|YP_002306927.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] gi|212008648|gb|ACJ16030.1| 4Fe-4S cluster-binding protein [Thermococcus onnurineus NA1] Length = 168 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC C+ C++VCP Y + + I+PD+CI C +C CP D + Sbjct: 47 NCRHCERAPCMDVCPAGAIYRDSDGAIIINPDKCIGCYMCLAVCPFGVPSFDVK 100 >gi|205352798|ref|YP_002226599.1| anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272579|emb|CAR37483.1| putative anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627867|gb|EGE34210.1| putative anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|170290696|ref|YP_001737512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174776|gb|ACB07829.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 116 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 C C C++VCP E I CI CG C CP AI D Sbjct: 38 CRACSDPSCMKVCPTSALRSREGGGVILDSRLCIGCGYCVKACPFGAIFWD 88 Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C + CV+ CP + + + P C CG+C CP IK Sbjct: 70 CIGCGY--CVKACPFGAIF--WDCVNDKPVICTHCGLCVDFCPYGVIK 113 >gi|161503909|ref|YP_001571021.1| hypothetical protein SARI_01999 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865256|gb|ABX21879.1| hypothetical protein SARI_01999 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|150007688|ref|YP_001302431.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides distasonis ATCC 8503] gi|255013607|ref|ZP_05285733.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_7] gi|149936112|gb|ABR42809.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides distasonis ATCC 8503] Length = 596 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 ++ E C C T C VCPV G I P CI CG C +C AI Sbjct: 542 FINPEKCKGC--TLCARVCPVHAITGGRKIPHIIDPQACIRCGTCMEKCKFGAIY 594 Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I+P++C C +C CPV AI Sbjct: 540 QYFINPEKCKGCTLCARVCPVHAI 563 >gi|147677591|ref|YP_001211806.1| ferredoxin [Pelotomaculum thermopropionicum SI] gi|146273688|dbj|BAF59437.1| ferredoxin [Pelotomaculum thermopropionicum SI] Length = 58 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y +++ C+ C C+E CP D EG + I PD+C +CG C CP AI + Sbjct: 5 AYKISDECLACG--SCMEACPNDAISEG-DIYKIDPDKCAECGACVDACPTGAIIEE 58 >gi|16764842|ref|NP_460457.1| dimethyl sulphoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994479|ref|ZP_02575570.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168463083|ref|ZP_02697014.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197263256|ref|ZP_03163330.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16420017|gb|AAL20416.1| putative dimethyl sulphoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|195634592|gb|EDX52944.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197241511|gb|EDY24131.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205327659|gb|EDZ14423.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246698|emb|CBG24508.1| putative anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993396|gb|ACY88281.1| putative dimethyl sulphoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158027|emb|CBW17522.1| putative anaerobic dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912480|dbj|BAJ36454.1| putative dimethylsulfoxide reductase B subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224115|gb|EFX49178.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616115|gb|EFY13031.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620564|gb|EFY17426.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622965|gb|EFY19807.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322638773|gb|EFY35468.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322646573|gb|EFY43081.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649061|gb|EFY45502.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654577|gb|EFY50898.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322665179|gb|EFY61367.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667923|gb|EFY64083.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671665|gb|EFY67786.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677288|gb|EFY73352.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680048|gb|EFY76087.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323129766|gb|ADX17196.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323200039|gb|EFZ85127.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323205664|gb|EFZ90627.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323223624|gb|EGA07937.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232209|gb|EGA16315.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234380|gb|EGA18467.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237831|gb|EGA21890.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323255983|gb|EGA39723.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323266687|gb|EGA50174.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|332988379|gb|AEF07362.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|325576997|ref|ZP_08147568.1| hydrogenase-2 operon protein HybA [Haemophilus parainfluenzae ATCC 33392] gi|325160955|gb|EGC73074.1| hydrogenase-2 operon protein HybA [Haemophilus parainfluenzae ATCC 33392] Length = 345 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 YV + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 104 AYVKKQ-CMHCVDPNCVAVCPVQALTKDPKTGIVKYDPDICTGCRYCMVGCPFDVPKYDY 162 Query: 60 E 60 + Sbjct: 163 D 163 >gi|313886419|ref|ZP_07820139.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924135|gb|EFR34924.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 492 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP C +N I + CI CG C CP AI Sbjct: 108 YEVSNLCRGCVSRACSSNCPKSCISFKKNGQAQIDHEICISCGQCHKNCPYHAIVY 163 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 E CI C C E CPV + E+ + I +CI CG C CP Sbjct: 144 EICISCGQCHKNCPYHAIVYIPVPCEESCPVGAISKDEDGIEHIDESKCIYCGSCLNACP 203 Query: 52 VDAIKP 57 AI Sbjct: 204 FGAIFE 209 >gi|301310929|ref|ZP_07216858.1| NADH dehydrogenase I, F subunit [Bacteroides sp. 20_3] gi|300830992|gb|EFK61633.1| NADH dehydrogenase I, F subunit [Bacteroides sp. 20_3] Length = 780 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 +T++C+ C T C + CP D +I ++C+ CG+C EC DAI+ Sbjct: 724 ITDDCVGC--TKCSKACPSDAIPYTPYEKHSIDIEKCVLCGLCIDECSFDAIR 774 >gi|300088669|ref|YP_003759191.1| nitrite and sulphite reductase 4Fe-4S region [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528402|gb|ADJ26870.1| nitrite and sulphite reductase 4Fe-4S region [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 516 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C CV VC + + + I + C CG C CP DA Sbjct: 392 ADACTNCGL--CVPVCKRRAITQAGDNIVIDRESCRQCGQCVAVCPFDA 438 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 10/44 (22%) Query: 21 CPVDC---------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP C FY +F + D C +CG+C P C AI Sbjct: 368 CPNSCGVSHLADLGFYGTMDFDY-NADACTNCGLCVPVCKRRAI 410 >gi|260913866|ref|ZP_05920340.1| electron transport complex [Pasteurella dagmatis ATCC 43325] gi|260631953|gb|EEX50130.1| electron transport complex [Pasteurella dagmatis ATCC 43325] Length = 197 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ E CI C T C++ CPVD + I PD C C +C P CP D I Sbjct: 107 AFIDEEMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVPPCPTDCI 159 >gi|258406380|ref|YP_003199122.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] gi|257798607|gb|ACV69544.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfohalobium retbaense DSM 5692] Length = 807 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E CI C C VCP E + P C CG+C CP A Sbjct: 598 ETCIQC--RMCETVCPHGAIRLTEEGMVADPAFCQACGLCAAACPTHA 643 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 20/75 (26%) Query: 8 NCILCKHTDCVEVCPV------------------DCFYEGENFLAIHPDECIDCGVCEPE 49 C+ C C VCP D + I D C CG CE Sbjct: 251 ACVACG--ACSAVCPEFGHSGFNEGLFARKAIDKDAPRAVPDAYTILDDVCTRCGACEEV 308 Query: 50 CPVDAIKPDTEPGLE 64 CP AI EP Sbjct: 309 CPAGAIDLKAEPEER 323 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 9/17 (52%) Query: 35 IHPDECIDCGVCEPECP 51 + P C+ CG C CP Sbjct: 247 VDPAACVACGACSAVCP 263 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 ++ + CI C +CE CP AI+ Sbjct: 594 HLNRETCIQCRMCETVCPHGAIR 616 >gi|160888148|ref|ZP_02069151.1| hypothetical protein BACUNI_00556 [Bacteroides uniformis ATCC 8492] gi|317478948|ref|ZP_07938095.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|156862283|gb|EDO55714.1| hypothetical protein BACUNI_00556 [Bacteroides uniformis ATCC 8492] gi|316904925|gb|EFV26732.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 486 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + E I D CI CG+C CP AI Sbjct: 116 YEITNLCRGCTARSCQVNCPKKAVHVKESGQAWIDHDACISCGICHKSCPYHAIVY 171 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E + I +CI CG C CP Sbjct: 152 DACISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEKGIEHIDESKCIYCGKCLNACP 211 Query: 52 VDAIKP 57 AI Sbjct: 212 FGAIFE 217 >gi|74316589|ref|YP_314329.1| DMSO reductase subunit B [Thiobacillus denitrificans ATCC 25259] gi|74056084|gb|AAZ96524.1| DMSO reductase chain B [Thiobacillus denitrificans ATCC 25259] Length = 231 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ DCV VCP + E+ + I D+C+ C C CP A + D Sbjct: 71 SCMHCEDADCVTVCPTGASYKRAEDGIVLIDQDKCMGCNYCSWACPYGARELD 123 >gi|284988958|ref|YP_003407512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062203|gb|ADB73141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geodermatophilus obscurus DSM 43160] Length = 355 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C C H C++VCP + E + + D C CG C P CP I+ Sbjct: 174 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQGDICNGCGYCVPSCPYGVIEQ 226 >gi|28898222|ref|NP_797827.1| anaerobic dimethyl sulfoxide reductase subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|260361744|ref|ZP_05774771.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus K5030] gi|260878563|ref|ZP_05890918.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AN-5034] gi|260898976|ref|ZP_05907417.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus Peru-466] gi|28806439|dbj|BAC59711.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|308087958|gb|EFO37653.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus Peru-466] gi|308091188|gb|EFO40883.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus AN-5034] gi|308113620|gb|EFO51160.1| dimethylsulfoxide reductase, chain B [Vibrio parahaemolyticus K5030] Length = 209 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + C +VCP + E + F+ + CI C C CP A + Sbjct: 62 AYYLSISCNHCTNPACTKVCPSGAMHKREEDGFVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|167550056|ref|ZP_02343814.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168236875|ref|ZP_02661933.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737930|ref|YP_002114017.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|200389576|ref|ZP_03216187.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194713432|gb|ACF92653.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290223|gb|EDY29580.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602021|gb|EDZ00567.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325023|gb|EDZ12862.1| anaerobic dimethyl sulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 205 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|70732171|ref|YP_261927.1| RnfABCDGE type electron transport complex subunit B [Pseudomonas fluorescens Pf-5] gi|68346470|gb|AAY94076.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas fluorescens Pf-5] Length = 401 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 74 AHIREAECIGC--TKCIQACPVDAIVGAAKLMHSVLIDECTGCDLCVAPCPVDCI 126 >gi|307297327|ref|ZP_07577133.1| cobyrinic acid ac-diamide synthase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916587|gb|EFN46969.1| cobyrinic acid ac-diamide synthase [Thermotogales bacterium mesG1.Ag.4.2] Length = 291 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++++CI C C + C D G + P C CG+C CP DAI + Sbjct: 63 ISDSCISCG--ICEKYCRFDAVIRGGPYSV-DPYACEGCGMCVAVCPADAITLKDNKSGD 119 Query: 65 LWL 67 +L Sbjct: 120 YFL 122 >gi|288574747|ref|ZP_06393104.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570488|gb|EFC92045.1| NADH dehydrogenase (quinone) [Dethiosulfovibrio peptidovorans DSM 11002] Length = 594 Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 + C C C + CPV+C +G+ I D C+ CG C +CP DAI Sbjct: 544 DKCKKCGL--CAKNCPVNCI-DGDRKTQFVIDEDACVRCGTCYDKCPFDAI 591 Score = 40.1 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP + I D+C CG+C CPV+ I D Sbjct: 526 RSCPAGA-CQALIRYRIDQDKCKKCGLCAKNCPVNCIDGD 564 >gi|293376326|ref|ZP_06622563.1| ferredoxin [Turicibacter sanguinis PC909] gi|292645015|gb|EFF63088.1| ferredoxin [Turicibacter sanguinis PC909] Length = 55 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + CI C C CPV+C EG + +I D CIDCG CE CP ++I Sbjct: 1 MPRKILDTCIACG--SCAAECPVECISEG-DIYSIDADVCIDCGACEAVCPTESI 52 >gi|288957563|ref|YP_003447904.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] gi|288909871|dbj|BAI71360.1| 4Fe-4S ferredoxin, iron-sulfur binding [Azospirillum sp. B510] Length = 688 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 20/54 (37%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C++VCP + +AI P C CG C CP A P Sbjct: 287 RKTGCTRCLDVCPTGAVTPNGDHVAIDPHVCAGCGSCAAVCPTGAATYALPPAA 340 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 4/64 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV CP + + L+ D C+ CG+C CP I E Sbjct: 521 VDVEGCTLCL--ACVGACPTGALLDNADKPMLSFAQDACVQCGLCRTTCPEKVISLVPEI 578 Query: 62 GLEL 65 Sbjct: 579 DFRD 582 >gi|262381803|ref|ZP_06074941.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_33B] gi|262296980|gb|EEY84910.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_33B] Length = 596 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 ++ E C C T C VCPV G I P CI CG C +C AI Sbjct: 542 FINPEKCKGC--TLCARVCPVHAITGGRKIPHIIDPQACIRCGTCMEKCKFGAIY 594 Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I+P++C C +C CPV AI Sbjct: 540 QYFINPEKCKGCTLCARVCPVHAI 563 >gi|257063420|ref|YP_003143092.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] gi|256791073|gb|ACV21743.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] Length = 210 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C + +CV VCP ++ + L ++ + C+ CG C CP A D Sbjct: 59 YHISLACNHCANPECVHVCPTGAMHKNDLGLVVVNNERCVGCGYCTIACPYHAPSID 115 >gi|225571993|ref|ZP_03780857.1| hypothetical protein RUMHYD_00287 [Blautia hydrogenotrophica DSM 10507] gi|225040526|gb|EEG50772.1| hypothetical protein RUMHYD_00287 [Blautia hydrogenotrophica DSM 10507] Length = 368 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V + CI CK C ++C D + AI+ D+C+ CG C CP DAI P ++ Sbjct: 190 PHVNQKLCIGCK--KCAQICAHDAPEFKDLKAAINHDKCVGCGRCLGVCPKDAICPASDE 247 Query: 62 GLELWLKINSEYATQWPNITTKKE 85 ++ +N + A + + Sbjct: 248 SNDI---LNCKIAEYTKAVIEDRP 268 >gi|257063055|ref|YP_003142727.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256790708|gb|ACV21378.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 212 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C+ C +C+ VCP + + + + D CI C C CP + + +++ Sbjct: 88 YRVSTSCMHCDDPNCMRVCPAGAISKVDAGIVQVDKDLCIGCKYCFQACPYEVPRYNSD 146 >gi|288575149|ref|ZP_06393506.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570890|gb|EFC92447.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 229 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 E+C+ C T C + CPV EG+ I P++C+ CGVC +CP AI+ D Sbjct: 173 EDCVGC--TICAKACPVGAI-EGKVKEKHVIDPEKCVGCGVCASKCPKGAIEEDE 224 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDA 54 E CI C C++VCP + E + +H D C C C CPVDA Sbjct: 64 EKCIGCG--MCMKVCPANAIERAPEDPKKIIVHNDRCCFCAQCNDICPVDA 112 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++CI CG+C CP +AI+ E Sbjct: 62 DREKCIGCGMCMKVCPANAIERAPEDP 88 >gi|282599783|ref|ZP_06257365.1| tetrathionate reductase complex, subunit B [Providencia rustigianii DSM 4541] gi|282567821|gb|EFB73356.1| tetrathionate reductase complex, subunit B [Providencia rustigianii DSM 4541] Length = 250 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ E+ + + + C+ C C CP DA Sbjct: 105 CNHCDNPPCVPVCPVQATYQREDGIVVVDNERCVGCAYCVQACPYDA 151 >gi|225850216|ref|YP_002730450.1| sulfur reductase FeS subunit [Persephonella marina EX-H1] gi|225646174|gb|ACO04360.1| sulfur reductase FeS subunit [Persephonella marina EX-H1] Length = 211 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + V C C++ C +CPV + N + + + CI C C CP +AI D Sbjct: 51 HFVPLRCNHCENAPCERICPVGALHYLPNGIVNVDHNRCIGCASCMMACPYNAIYLD 107 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 31/120 (25%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPVDA 54 CI C C+ CP + + P D+C C C CP A Sbjct: 89 CIGC--ASCMMACPYNAI-------YLDPVTNSADKCTYCAHRIEVGMMPACVVACPTHA 139 Query: 55 -IKPDTEPGLELWLKINSEYATQWPNITTKKESL---PSAAKMDGVKQKYEKYFSPNPGG 110 I D + +I S+Y ++ +K L P + G + S P G Sbjct: 140 NIFGDLDDPES---EI-SKYLKSHRDVMVRKPELGTKPKHFYVRGSTVALDPLASERPEG 195 >gi|227824895|ref|ZP_03989727.1| ferredoxin [Acidaminococcus sp. D21] gi|226905394|gb|EEH91312.1| ferredoxin [Acidaminococcus sp. D21] Length = 429 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C C CV+ C V + I D CIDCG C CP AI EP EL Sbjct: 14 DRCTGCLL--CVKKCLVQAIRVRDGKAVIISDRCIDCGECIRCCPTRAIAALVEPLEELK 71 Query: 67 -LKINSEYAT 75 K+N AT Sbjct: 72 SYKVNIALAT 81 >gi|167746910|ref|ZP_02419037.1| hypothetical protein ANACAC_01622 [Anaerostipes caccae DSM 14662] gi|167653870|gb|EDR97999.1| hypothetical protein ANACAC_01622 [Anaerostipes caccae DSM 14662] Length = 304 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C C++VCP ++ + +H ++CI C C ECP A+K + E Sbjct: 61 CIGC--HHCIDVCPSKAISLIQDHIRVHAEKCIGCRQCVLECPGKALKSEGE 110 >gi|127510991|ref|YP_001092188.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636286|gb|ABO21929.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 558 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V T+NC LC CV CP +G L C+ CG+CE CP I Sbjct: 423 VNTDNCTLCL--SCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVI 474 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D ++ + I P C G C CP AI D L +N Sbjct: 203 CLNFCPADAIASVDHKIEIDPYLCHGAGSCTNACPTGAISYDLPTPQALHSYLNKLVTRF 262 Query: 71 SEYATQWPNI 80 A P I Sbjct: 263 RSAAQTAPVI 272 >gi|312602256|ref|YP_004022101.1| ferredoxin--NADP reductase [Burkholderia rhizoxinica HKI 454] gi|312169570|emb|CBW76582.1| Ferredoxin--NADP reductase (EC 1.18.1.2) [Burkholderia rhizoxinica HKI 454] Length = 406 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C C E CP D N ++ C C C P CP AI + Sbjct: 14 CIRCN--TCEETCPNDAITHDANNYVVNAQVCNGCMACVPPCPTGAIDNWHQVLEADAYS 71 Query: 69 INSEYATQWPNITTKKES 86 I+++ A W + ++ Sbjct: 72 IDAQLA--WEELPPRQSP 87 Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P CI C CE CP DAI D Sbjct: 9 IDPQVCIRCNTCEETCPNDAITHD 32 >gi|296104200|ref|YP_003614346.1| anaerobic dimethyl sulfoxide reductase subunit B [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058659|gb|ADF63397.1| anaerobic dimethyl sulfoxide reductase subunit B [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 209 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSVSCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|238752180|ref|ZP_04613661.1| Electron transport complex protein rnfB [Yersinia rohdei ATCC 43380] gi|238709551|gb|EEQ01788.1| Electron transport complex protein rnfB [Yersinia rohdei ATCC 43380] Length = 207 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ ENCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|302390835|ref|YP_003826655.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302202912|gb|ADL11590.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 55 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + VT+ C+ C+ C++ CP D EG + +I DECI+CG+C ECP +AI + Sbjct: 1 MAFKVTDECVACE--TCLDECPEDAIEEG-DIYSIDEDECIECGICADECPTEAIIEE 55 >gi|258545781|ref|ZP_05706015.1| electron transport complex, RnfABCDGE type, B subunit [Cardiobacterium hominis ATCC 15826] gi|258518971|gb|EEV87830.1| electron transport complex, RnfABCDGE type, B subunit [Cardiobacterium hominis ATCC 15826] Length = 186 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +++ + CI C T C++ CPVD + I DEC C +C CPV+ I Sbjct: 113 AFIIEDWCIGC--TKCIKACPVDAILGSNQKMHTIISDECTGCRLCVDPCPVNCIIMKPR 170 Query: 61 PGLELW 66 W Sbjct: 171 DQKWNW 176 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 VE P++ E I D CI C C CPVDAI Sbjct: 95 VEPKPLNADNGAETPPQVAFIIEDWCIGCTKCIKACPVDAI 135 >gi|157963951|ref|YP_001503985.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157848951|gb|ABV89450.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 559 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V TENC LC CV CP +G + A+H +C+ CG+CE CP I Sbjct: 424 VNTENCTLC--MSCVATCPTMALTDGGDRPALHFVEQDCVQCGLCETACPEKVI 475 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 17/49 (34%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C+ CP D + I P C G C CP AI D Sbjct: 197 TRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTNACPTGAISYDLPTPQ 245 >gi|89897348|ref|YP_520835.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336796|dbj|BAE86391.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 175 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C+ C E CPV + + E+ + + ++CI CG+C CP +A K + + Sbjct: 58 ACMHCEKPACAEACPVKAYTKREDGIVVQDHEKCIGCGMCVSACPYEAPKLNKDKKKAEK 117 Query: 67 LKINSEYATQ 76 ++ + + Sbjct: 118 CELCAHLLEK 127 >gi|83310748|ref|YP_421012.1| hydrogenase 2 protein HybA [Magnetospirillum magneticum AMB-1] gi|82945589|dbj|BAE50453.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 339 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +C+ C CV CPV + + + D CI C C CP + + Sbjct: 115 IKRSCLHCADPSCVSACPVSAMQKRATDGVVTYNKDACIGCRYCVAACPFGVPQFQYD 172 >gi|303327208|ref|ZP_07357650.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] gi|302863196|gb|EFL86128.1| iron-sulfur cluster-binding protein [Desulfovibrio sp. 3_1_syn3] Length = 364 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 2 TYVVTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+V + C+ C CV+ CP + + + CI C C CPV AI D Sbjct: 186 THVQVDEKTCVGCG--KCVKACPQKALSLRKKKSQVDVNRCIGCFECITVCPVKAISLDW 243 Query: 60 EPGLELWLKINSEYA 74 + +++ +EYA Sbjct: 244 ATEMTPFMERLTEYA 258 >gi|302342956|ref|YP_003807485.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301639569|gb|ADK84891.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 550 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C C C++ CP + I D C+ CG C CP DAI+P Sbjct: 20 EKCTGC--VLCMKACPNQAIRVHDGKAVIRFDHCVACGACYRVCPADAIEP 68 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I P++C C +C CP AI+ Sbjct: 15 LRILPEKCTGCVLCMKACPNQAIR 38 >gi|294646919|ref|ZP_06724540.1| protein HymB [Bacteroides ovatus SD CC 2a] gi|292637864|gb|EFF56261.1| protein HymB [Bacteroides ovatus SD CC 2a] Length = 489 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY ++ E CI C C + CP D I PD+CI CG+C C +AI Sbjct: 432 LTYTISPERCIGC--HLCAKNCPADAISGLVRKPHVIAPDKCIKCGMCMARCKFNAI 486 >gi|253576869|ref|ZP_04854194.1| NADH dehydrogenase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843736|gb|EES71759.1| NADH dehydrogenase [Paenibacillus sp. oral taxon 786 str. D14] Length = 628 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY + E C C T C CP + E + I P CI CG+C C +AI Sbjct: 572 TYTIDPEKCRGC--TLCARKCPAEAISGEMKEPHVIDPQLCIKCGICFDSCKFEAIY 626 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP I P++C C +C +CP +AI + + Sbjct: 562 CPAG-VCRSLITYTIDPEKCRGCTLCARKCPAEAISGEMKEPH 603 >gi|158320076|ref|YP_001512583.1| indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] gi|158140275|gb|ABW18587.1| Indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] Length = 605 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCF--YEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 YV E CI C C++ CP YEG L +I PD C+ C +C CPV+AIK Sbjct: 536 YVDPEICISC--RSCIKTNCPPLKMKKYEGIEKLKSSIDPDMCVGCSICAQVCPVNAIK 592 >gi|15679729|ref|NP_276847.1| formate hydrogenlyase, iron-sulfur subunit I [Methanothermobacter thermautotrophicus str. Delta H] gi|2622868|gb|AAB86207.1| formate hydrogenlyase, iron-sulfur subunit I [Methanothermobacter thermautotrophicus str. Delta H] Length = 167 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C+ C VCP D + + P+ CI CG+C CP A+ + + Sbjct: 46 CQQCEDAPCRTVCPTDAIDD-----EVDPERCIGCGLCMVVCPFGAVVMEDRKAQK 96 >gi|323700506|ref|ZP_08112418.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323460438|gb|EGB16303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 185 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 +C C++ C+ VCPV+ + + E+ + +H ++CI CG C CP A K Sbjct: 58 SCNHCENPACLNVCPVEAYTKREDGVVVHHQEKCIGCGNCIRSCPYGAPKY 108 >gi|317471719|ref|ZP_07931060.1| glycyl-radical enzyme activating protein family [Anaerostipes sp. 3_2_56FAA] gi|316900823|gb|EFV22796.1| glycyl-radical enzyme activating protein family [Anaerostipes sp. 3_2_56FAA] Length = 304 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C C++VCP ++ + +H ++CI C C ECP A+K + E Sbjct: 61 CIGC--HHCIDVCPSKAISLIQDHIRVHAEKCIGCRQCVLECPGKALKSEGE 110 >gi|294085673|ref|YP_003552433.1| DMSO reductase subunit B [Candidatus Puniceispirillum marinum IMCC1322] gi|292665248|gb|ADE40349.1| DMSO reductase chain B [Candidatus Puniceispirillum marinum IMCC1322] Length = 249 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP Y E + + ++PD CI C +C CP A + D Sbjct: 80 SCLHCEEPACVTVCPTGASYKREEDGIVLVNPDTCIGCKLCSWACPYGAREYD 132 >gi|291284040|ref|YP_003500858.1| Electron transport protein hydN [Escherichia coli O55:H7 str. CB9615] gi|209761974|gb|ACI79299.1| electron transport protein HydN [Escherichia coli] gi|290763913|gb|ADD57874.1| Electron transport protein hydN [Escherichia coli O55:H7 str. CB9615] gi|320662296|gb|EFX29693.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O55:H7 str. USDA 5905] Length = 175 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP G+ F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRGKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|114777067|ref|ZP_01452087.1| electron transport complex protein RnfB [Mariprofundus ferrooxydans PV-1] gi|114552588|gb|EAU55048.1| electron transport complex protein RnfB [Mariprofundus ferrooxydans PV-1] Length = 194 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + +V + CI C T C++ CPVD + D C C +C CPVD I Sbjct: 105 LAFVREDECIGC--TLCIKACPVDAIIGAPKQYHTVLADHCTGCELCVEPCPVDCIDMLV 162 Query: 60 EPGL-ELW 66 +P L E W Sbjct: 163 KPELIEHW 170 >gi|89893061|ref|YP_516548.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor [Desulfitobacterium hafniense Y51] gi|89332509|dbj|BAE82104.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor [Desulfitobacterium hafniense Y51] Length = 264 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C H CV VCP + E+ + + CI C C CP A + Sbjct: 121 CNHCDHPPCVRVCPTQATFRREDGVVGMDMHRCIGCRFCMAACPYGARSFNYWDPKPHLA 180 Query: 68 KINSEYATQWPNITTKK 84 KIN EY + + K Sbjct: 181 KINPEYPHRSKGVVEKC 197 >gi|89893786|ref|YP_517273.1| hypothetical protein DSY1040 [Desulfitobacterium hafniense Y51] gi|89333234|dbj|BAE82829.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 422 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 7/57 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + CI C C +VCPV EG+ + + C+ CG+C CP I+ Sbjct: 291 IAQECIGCG--KCEKVCPVLAISMSTNAEGKKIAQVDHEVCLGCGICVRSCPKKVIE 345 Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 16/34 (47%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 N+L ECI CG CE CPV AI T Sbjct: 284 TTNYLPKIAQECIGCGKCEKVCPVLAISMSTNAE 317 >gi|113971773|ref|YP_735566.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886457|gb|ABI40509.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 188 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPY 104 >gi|223984601|ref|ZP_03634728.1| hypothetical protein HOLDEFILI_02024 [Holdemania filiformis DSM 12042] gi|223963448|gb|EEF67833.1| hypothetical protein HOLDEFILI_02024 [Holdemania filiformis DSM 12042] Length = 628 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C C + C CPV G+ I D+CI CG C C A+K D Sbjct: 577 EKCRKC--SMCARNCPVGAISGVPGQKPYVIDHDKCIKCGACMETCRFGAVKRD 628 Score = 41.3 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +I P++C C +C CPV AI PG + ++ Sbjct: 571 HYSIDPEKCRKCSMCARNCPVGAISG--VPGQKPYV 604 >gi|254513803|ref|ZP_05125864.1| electron transport complex protein RnfB [gamma proteobacterium NOR5-3] gi|219676046|gb|EED32411.1| electron transport complex protein RnfB [gamma proteobacterium NOR5-3] Length = 202 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +++ E+CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 114 AFIIEEDCIGC--TKCIQACPVDAIVGAAKQMHTVIAAECTGCDLCVDPCPVDCIE 167 >gi|218548085|ref|YP_002381876.1| hydrogenase 4, 4Fe-4S subunit [Escherichia fergusonii ATCC 35469] gi|218355626|emb|CAQ88237.1| putative hydrogenase 4, 4Fe-4S subunit [Escherichia fergusonii ATCC 35469] gi|324112972|gb|EGC06948.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] gi|325496488|gb|EGC94347.1| hydrogenase 4, 4Fe-4S subunit [Escherichia fergusonii ECD227] Length = 205 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C +VCPV+ ++ + ++ CI C +C CP AI Sbjct: 51 CHHCEDAPCQQVCPVNAISRHDDAIQLNETLCIGCKLCALVCPFGAI 97 >gi|322655203|gb|EFY51512.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] Length = 171 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 33 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 92 Query: 60 EPGL 63 + G Sbjct: 93 QTGQ 96 >gi|162456288|ref|YP_001618655.1| hypothetical protein sce8005 [Sorangium cellulosum 'So ce 56'] gi|161166870|emb|CAN98175.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 101 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +TE+CI C C CP + EG+ I P+ C +C C+ CPV+ Sbjct: 1 MATYITEDCINCG--ACEPECPNEAISEGDEIYVIDPELCTECVGFYDHEACQAVCPVEC 58 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++CI+CG CEPECP +AI E Sbjct: 7 EDCINCGACEPECPNEAISEGDE 29 >gi|149909449|ref|ZP_01898104.1| oxidoreductase [Moritella sp. PE36] gi|149807559|gb|EDM67508.1| oxidoreductase [Moritella sp. PE36] Length = 633 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C C++ CP + + + A+ PD C CG C CP +A + D G Sbjct: 141 ISMACNHCDDPVCLKGCPTKAYTKHVEYGAVLQDPDTCFGCGYCTWVCPYNAPQLDPIKG 200 Query: 63 L 63 Sbjct: 201 Q 201 >gi|303249089|ref|ZP_07335331.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ] gi|1914864|emb|CAA72423.1| cytochrome-c3 hydrogenase [Desulfovibrio fructosovorans JJ] gi|302489504|gb|EFL49448.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ] Length = 421 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 2 TYVVTEN---CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+V + CI C C+ CP GE + P CI+CG C CPV AI Sbjct: 25 AYIVQVDETKCIGCD--TCMGYCPTGAITGESGEPHKVVDPAACINCGQCLTHCPVAAIY 82 Query: 57 P 57 Sbjct: 83 E 83 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 13/30 (43%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + +CI C C CP AI ++ + Sbjct: 30 VDETKCIGCDTCMGYCPTGAITGESGEPHK 59 >gi|219666328|ref|YP_002456763.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219536588|gb|ACL18327.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 264 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C H CV VCP + E+ + + CI C C CP A + Sbjct: 121 CNHCDHPPCVRVCPTQATFRREDGVVGMDMHRCIGCRFCMAACPYGARSFNYWDPKPHLA 180 Query: 68 KINSEYATQWPNITTKK 84 KIN EY + + K Sbjct: 181 KINPEYPHRSKGVVEKC 197 >gi|222053655|ref|YP_002536017.1| Fis family transcriptional regulator [Geobacter sp. FRC-32] gi|221562944|gb|ACM18916.1| sigma54 specific transcriptional regulator, Fis family [Geobacter sp. FRC-32] Length = 754 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 TE C C CV CPV + F I + CI CG C CP A Sbjct: 8 TEKCRKC--YSCVRSCPVKAIKVEKTFTEIIFERCIGCGNCLSNCPQHA 54 >gi|169633882|ref|YP_001707618.1| hypothetical protein ABSDF2362 [Acinetobacter baumannii SDF] gi|169152674|emb|CAP01675.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 263 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI-----KPDTE 60 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCIDLVEDTQALP 147 Query: 61 PGLELWLKIN 70 + + + N Sbjct: 148 SEQQRFAEQN 157 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCINACPVDAI 107 >gi|315425450|dbj|BAJ47114.1| ABC transporter ATP-binding protein [Candidatus Caldiarchaeum subterraneum] Length = 595 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 23/107 (21%) Query: 7 ENC--ILCKHTDCVEVCP-----VDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKP- 57 + C C + C+ CP ++ GE+ I + CI CG+C +CP +AI Sbjct: 13 DRCDSKKCGNWPCITYCPPVRNNIEAIKMGEDGFPIISETLCISCGICVKKCPFEAITII 72 Query: 58 ----DTEPGLELWLKINS-EYATQWPNITTKKESLPSAAKMDGVKQK 99 + + +N + P A K+ G+ K Sbjct: 73 NLPTELREDVAHHYGVNKFKLFRL---------PYPEAGKVVGLLGK 110 >gi|311108737|ref|YP_003981590.1| ferredoxin 4 [Achromobacter xylosoxidans A8] gi|310763426|gb|ADP18875.1| ferredoxin 4 [Achromobacter xylosoxidans A8] gi|317405495|gb|EFV85804.1| ferredoxin [Achromobacter xylosoxidans C54] Length = 83 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 10/73 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +TE CI C C CP D GE++ I PD C +C C+ CPV+ Sbjct: 1 MALTITEECINCDV--CEPQCPNDAISMGEDYYVIDPDRCTECVGHHDEPQCKVVCPVEC 58 Query: 55 IK--PDTEPGLEL 65 I+ P + G E Sbjct: 59 IELHPQWKEGQEQ 71 >gi|224367281|ref|YP_002601444.1| Fdx3 [Desulfobacterium autotrophicum HRM2] gi|223689997|gb|ACN13280.1| Fdx3 [Desulfobacterium autotrophicum HRM2] Length = 179 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C C+ + C +VCPV+ + N + + + C+ C C CP AI P L Sbjct: 52 TIPVQCRHCEDSPCAQVCPVNAIIQKGNHIDVIDELCVGCKSCVLACPFGAISVTERPAL 111 >gi|218961476|ref|YP_001741251.1| [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730133|emb|CAO81045.1| [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 619 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C + C CPV C E I+ CI CG C CPV AI Sbjct: 546 DKCIGC--SLCARKCPVSCISGSREEKYTINQLSCIKCGTCMDVCPVKAI 593 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 7/46 (15%) Query: 11 LCKHTDCVE-VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C VCP I D+CI C +C +CPV I Sbjct: 524 HIRDKSCANKVCPDLM------HFEIDKDKCIGCSLCARKCPVSCI 563 >gi|16763989|ref|NP_459604.1| hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414251|ref|YP_151326.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179213|ref|YP_215630.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615182|ref|YP_001589147.1| hypothetical protein SPAB_02950 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550859|ref|ZP_02344615.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168231615|ref|ZP_02656673.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240451|ref|ZP_02665383.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260879|ref|ZP_02682852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465779|ref|ZP_02699661.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818769|ref|ZP_02830769.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444851|ref|YP_002039852.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449002|ref|YP_002044643.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470652|ref|ZP_03076636.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249684|ref|YP_002145585.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262291|ref|ZP_03162365.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363174|ref|YP_002142811.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245238|ref|YP_002214603.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390569|ref|ZP_03217180.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238911563|ref|ZP_04655400.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419123|gb|AAL19563.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128508|gb|AAV78014.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126846|gb|AAX64549.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364546|gb|ABX68314.1| hypothetical protein SPAB_02950 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403514|gb|ACF63736.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407306|gb|ACF67525.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457016|gb|EDX45855.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632027|gb|EDX50547.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094651|emb|CAR60175.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213387|gb|ACH50784.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240546|gb|EDY23166.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939754|gb|ACH77087.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603014|gb|EDZ01560.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324243|gb|EDZ12082.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205334041|gb|EDZ20805.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340164|gb|EDZ26928.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344169|gb|EDZ30933.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349919|gb|EDZ36550.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261245885|emb|CBG23686.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301157213|emb|CBW16700.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911643|dbj|BAJ35617.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084879|emb|CBY94669.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226189|gb|EFX51240.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713677|gb|EFZ05248.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128928|gb|ADX16358.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622355|gb|EGE28700.1| putative hydrogenase protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 185 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|303256259|ref|ZP_07342275.1| ferredoxin hydrogenase [Burkholderiales bacterium 1_1_47] gi|302860988|gb|EFL84063.1| ferredoxin hydrogenase [Burkholderiales bacterium 1_1_47] Length = 450 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 ++ +NC+ C C + CPVD G + I D C+ CG C CP AI+ Sbjct: 37 HINKDNCVGCD--TCRKFCPVDAISGGLGAIHKIRDDACVSCGQCLSACPFGAIEQ 90 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 + I+ D C+ C C CPVDAI Sbjct: 36 IHINKDNCVGCDTCRKFCPVDAI 58 >gi|288931383|ref|YP_003435443.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288893631|gb|ADC65168.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 187 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C+ C C++VCPV+ E + + + D CI CG C CP A + Sbjct: 52 IPLQCLHCNDPPCMKVCPVNAIWKREEDGIVLVKKDICIGCGYCASACPFGAPQF 106 >gi|160935016|ref|ZP_02082402.1| hypothetical protein CLOLEP_03892 [Clostridium leptum DSM 753] gi|156866469|gb|EDO59841.1| hypothetical protein CLOLEP_03892 [Clostridium leptum DSM 753] Length = 571 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +V + C C T C VCPV I ++CI CG C +C DAI Sbjct: 518 IVADKCRGC--TACARVCPVGAISGTVKQPHTIDVNKCIKCGACIEKCKFDAI 568 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I D+C C C CPV AI Sbjct: 503 HRCPAG-VCKALLHYEIVADKCRGCTACARVCPVGAI 538 >gi|16759572|ref|NP_455189.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142655|ref|NP_805997.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213023991|ref|ZP_03338438.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213051862|ref|ZP_03344740.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419294|ref|ZP_03352360.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425125|ref|ZP_03357875.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581054|ref|ZP_03362880.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622427|ref|ZP_03375210.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647695|ref|ZP_03377748.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289812473|ref|ZP_06543102.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25285330|pir||AG0577 molybdopterin-containing oxidoreductase iron-sulfur chain STY0660 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501864|emb|CAD05089.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29138286|gb|AAO69857.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 185 Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|251789031|ref|YP_003003752.1| hydrogenase 2 protein HybA [Dickeya zeae Ech1591] gi|247537652|gb|ACT06273.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya zeae Ech1591] Length = 338 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + +H D C C C CP + K D E Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALKKDPKTGVVHYDASICTGCRYCMVACPFNVPKYDYENP 172 Query: 63 L 63 L Sbjct: 173 L 173 >gi|157373499|ref|YP_001472099.1| anaerobic dimethyl sulfoxide reductase, subunit B [Shewanella sediminis HAW-EB3] gi|157315873|gb|ABV34971.1| anaerobic dimethyl sulfoxide reductase, subunit B [Shewanella sediminis HAW-EB3] Length = 205 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + +C C C + CP + E+ L IH D CI C CE CP DA + D Sbjct: 59 AYYTSISCNHCDTPACTKACPTGAMHKRSEDGLVMIHDDICIGCSSCEQACPYDAPQLDE 118 >gi|298384459|ref|ZP_06994019.1| protein HymB [Bacteroides sp. 1_1_14] gi|298262738|gb|EFI05602.1| protein HymB [Bacteroides sp. 1_1_14] Length = 635 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + E CI C C + CP D I+P++CI CG+C C AI Sbjct: 578 LTYTINPELCIGC--HLCAKNCPADAISGLVRKPHVINPEKCIKCGMCMARCKFKAI 632 >gi|239933594|ref|ZP_04690547.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces ghanaensis ATCC 14672] Length = 338 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDTEPG 62 ++ C C H C++VCP + E + + PD C CG C CP I +PD Sbjct: 157 SDVCKHCTHAGCLDVCPTGALFRTEFGSVVVQPDICNGCGYCVSGCPYGVIDRRPDDGRA 216 Query: 63 LE 64 + Sbjct: 217 WK 218 >gi|183231113|ref|XP_656317.2| dihydropyrimidine dehydrogenase [Entamoeba histolytica HM-1:IMSS] gi|169802613|gb|EAL50934.2| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica HM-1:IMSS] Length = 901 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + NCI C C C + + N + ++CI C +C CPV+AI+ Sbjct: 827 IKNNCIGCG--SCALSCRDNSTTAIVKDGNRYRVDDEKCIGCALCSSVCPVNAIEY 880 >gi|161504217|ref|YP_001571329.1| hypothetical protein SARI_02324 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865564|gb|ABX22187.1| hypothetical protein SARI_02324 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 185 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|189423641|ref|YP_001950818.1| electron transfer flavoprotein subunit alpha [Geobacter lovleyi SZ] gi|189419900|gb|ACD94298.1| Electron transfer flavoprotein alpha subunit [Geobacter lovleyi SZ] Length = 443 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C C CPV+C E + ++CI C C CP A++ P + L Sbjct: 22 CIACGAR-CESSCPVNCISMNEAGEPVVDTEKCIGCLKCVKVCPAQALEMFFTPEEQKIL 80 Query: 68 K 68 + Sbjct: 81 E 81 >gi|92114243|ref|YP_574171.1| electron transport complex, RnfABCDGE type, B subunit [Chromohalobacter salexigens DSM 3043] gi|91797333|gb|ABE59472.1| electron transport complex, RnfABCDGE type, B subunit [Chromohalobacter salexigens DSM 3043] Length = 335 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 12/85 (14%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI----- 55 ++ CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 77 AFIREAECIGC--TKCIQACPVDAILGAAKQMHTVIAGECTGCELCVAPCPVDCIDILPH 134 Query: 56 ----KPDTEPGLELWLKINSEYATQ 76 +T + +L +E Q Sbjct: 135 PEWVAAETRAQQDAYLTRRAELGRQ 159 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 15/34 (44%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P+ E I ECI C C CPVDAI Sbjct: 66 PLAQPAESPKVAFIREAECIGCTKCIQACPVDAI 99 >gi|117922054|ref|YP_871246.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117614386|gb|ABK49840.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 188 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPY 104 >gi|301155291|emb|CBW14757.1| hydrogenase 2 4Fe-4S ferredoxin-type component [Haemophilus parainfluenzae T3T1] Length = 346 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 YV + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 105 AYVKKQ-CMHCVDPNCVAVCPVQALTKDPKTGIVKYDPDICTGCRYCMVGCPFDVPKYDY 163 Query: 60 E 60 + Sbjct: 164 D 164 >gi|260428995|ref|ZP_05782972.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Citreicella sp. SE45] gi|260419618|gb|EEX12871.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Citreicella sp. SE45] Length = 249 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVPVCPTGASYKRVEDGIVLVNEDACIGCGLCAWACPYGAREMDLAAG 137 >gi|238749691|ref|ZP_04611196.1| Tetrathionate reductase subunit B [Yersinia rohdei ATCC 43380] gi|238712346|gb|EEQ04559.1| Tetrathionate reductase subunit B [Yersinia rohdei ATCC 43380] Length = 244 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + I C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVIDNTRCVGCAYCVQACPYEA 146 >gi|197118468|ref|YP_002138895.1| electron transfer flavoprotein subunit alpha [Geobacter bemidjiensis Bem] gi|197087828|gb|ACH39099.1| electron transfer flavoprotein, alpha subunit [Geobacter bemidjiensis Bem] Length = 436 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ CI C C VCP++ E I ++CI C C CP A++ Sbjct: 14 ARVIAGKCIACGAR-CQSVCPINGVEMSEQGEPVIETEKCIGCVKCVKACPAGALEMFYT 72 Query: 61 PGL 63 P Sbjct: 73 PEE 75 >gi|41018387|sp|Q00388|VHUB_METVO RecName: Full=Polyferredoxin protein vhuB gi|1747410|emb|CAA43512.1| polyferredoxin [Methanococcus voltae PS] Length = 398 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VTE C+ C ++CV VCPVD + I ++CI C VC CP +AI Sbjct: 128 VTEACVGC--SECVPVCPVDAISIEDELAVIDTEKCIYCSVCAQTCPWNAIY 177 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ VTE CI C+ CVEVCP D Y E+ + P+ C C +CE CPVDAI + E Sbjct: 192 SFTVTEECIGCE--KCVEVCPGDMITYNREDLIVKLPEACPACHLCEQNCPVDAISLEVE 249 Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C LC C CP E L + +CI CG C CP Sbjct: 34 CTLC--FSCASACPTGALVENNGKLIYNSSKCIKCGNCATACPTG 76 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCF-----YEGENFLAIHPDE-------CIDCGVCEPECPVDAIK 56 C+LC+ CV+ CP+D + P E C+ C C P CPVDAI Sbjct: 91 CVLCE--KCVDACPIDIISIPGKIDKPEREVTIPQEPIKVTEACVGCSECVPVCPVDAIS 148 Query: 57 PDTE 60 + E Sbjct: 149 IEDE 152 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 10/51 (19%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECP 51 CI C CV CP G+ N + P C +CG C CP Sbjct: 311 CIRCG--ACVMKCPTGALKMGKITHEGKEYNRIEFSPALCNECGECVDVCP 359 >gi|332702842|ref|ZP_08422930.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio africanus str. Walvis Bay] gi|332552991|gb|EGJ50035.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio africanus str. Walvis Bay] Length = 698 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 E C+ CV+VCP D + G + L ++P EC CG C CP I Sbjct: 136 EGCLGLG--SCVKVCPFDAIHMGPDNLPHVNPAECRACGKCVAVCPRGVI 183 >gi|322631438|gb|EFY28196.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] Length = 162 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 17 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 73 >gi|291441974|ref|ZP_06581364.1| formate dehydrogenase beta subunit [Streptomyces ghanaensis ATCC 14672] gi|291344869|gb|EFE71825.1| formate dehydrogenase beta subunit [Streptomyces ghanaensis ATCC 14672] Length = 333 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDTEPG 62 ++ C C H C++VCP + E + + PD C CG C CP I +PD Sbjct: 152 SDVCKHCTHAGCLDVCPTGALFRTEFGSVVVQPDICNGCGYCVSGCPYGVIDRRPDDGRA 211 Query: 63 LE 64 + Sbjct: 212 WK 213 >gi|238762649|ref|ZP_04623619.1| Electron transport complex protein rnfB [Yersinia kristensenii ATCC 33638] gi|238699294|gb|EEP92041.1| Electron transport complex protein rnfB [Yersinia kristensenii ATCC 33638] Length = 207 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ ENCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|254173867|ref|ZP_04880538.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thermococcus sp. AM4] gi|214032116|gb|EEB72947.1| 4Fe-4S ferredoxin, iron-sulfur binding [Thermococcus sp. AM4] Length = 237 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C C+ C++ CP + E F+ ++P+ CI C +C CP K + E Sbjct: 91 VPMRCQHCEDAPCMKACPTGAISKTEEGFVVLNPNMCIGCLMCVMACPFGHPKYEPE 147 >gi|167386568|ref|XP_001737815.1| dihydropyrimidine dehydrogenase [Entamoeba dispar SAW760] gi|165899267|gb|EDR25906.1| dihydropyrimidine dehydrogenase, putative [Entamoeba dispar SAW760] Length = 901 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + NCI C C C + + N + ++CI C +C CPV+AI+ Sbjct: 827 IKNNCIGCG--SCALSCRDNSTTAIVKDGNRYRVDDEKCIGCALCSSVCPVNAIEY 880 >gi|27366362|ref|NP_761890.1| electron transport complex protein RnfB [Vibrio vulnificus CMCP6] gi|37679375|ref|NP_933984.1| electron transport complex protein RnfB [Vibrio vulnificus YJ016] gi|320156873|ref|YP_004189252.1| electron transport complex protein RnfB [Vibrio vulnificus MO6-24/O] gi|33301651|sp|Q8D889|RNFB_VIBVU RecName: Full=Electron transport complex protein rnfB gi|71153697|sp|Q7MM82|RNFB_VIBVY RecName: Full=Electron transport complex protein rnfB gi|27362563|gb|AAO11417.1| Electron transport complex protein rnfB [Vibrio vulnificus CMCP6] gi|37198118|dbj|BAC93955.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Vibrio vulnificus YJ016] gi|319932185|gb|ADV87049.1| electron transport complex protein RnfB [Vibrio vulnificus MO6-24/O] Length = 198 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIEMIPL 164 Query: 58 DTEPGLELWLKINS 71 +T W ++N+ Sbjct: 165 ETTTETWKW-QLNA 177 >gi|257064912|ref|YP_003144584.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792565|gb|ACV23235.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 T C C + CVEVCP + + E L I+ D+CI CG C CP D Sbjct: 64 TMACQHCSNPACVEVCPTGASWKDTETGLVLINSDDCIGCGACLNACPYD 113 >gi|39995884|ref|NP_951835.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|39982648|gb|AAR34108.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens PCA] gi|298504898|gb|ADI83621.1| formate dehydrogenase, iron-sulfur subunit [Geobacter sulfurreducens KN400] Length = 277 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + H +CI C C CP K + Sbjct: 82 EMCMHCNDPACASVCPVGAFEKTAEGPVVYHSKKCIGCRFCMVACPFGIPKYE 134 >gi|323700521|ref|ZP_08112433.1| hypothetical protein DND132_3115 [Desulfovibrio sp. ND132] gi|323460453|gb|EGB16318.1| hypothetical protein DND132_3115 [Desulfovibrio desulfuricans ND132] Length = 239 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ CV VCPV Y+ EN L + D+C+ CG C CP DA Sbjct: 89 CNHCEEPACVPVCPVHATYKDENGLVLVDSDKCLACGFCVQACPYDA 135 >gi|301064419|ref|ZP_07204844.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441501|gb|EFK05841.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 369 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C CV C E I+ ++C+ CG C CP +AI + L+ K Sbjct: 196 CVGCGD--CVRHCAGSAISLKEKKAFINTEKCVGCGECILICPNEAIDVRWSRDIPLFQK 253 Query: 69 INSEYA 74 +EYA Sbjct: 254 KMAEYA 259 >gi|213580783|ref|ZP_03362609.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 155 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 10 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 66 >gi|164686658|ref|ZP_02210686.1| hypothetical protein CLOBAR_00253 [Clostridium bartlettii DSM 16795] gi|164604048|gb|EDQ97513.1| hypothetical protein CLOBAR_00253 [Clostridium bartlettii DSM 16795] Length = 628 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + +NCI C C + CP D E + I +C+ CG C +C AI+ Sbjct: 574 YFINDNCIGCGL--CKKNCPADAITGEKKEKHVIDTTKCLKCGACMEKCKKHAIE 626 Score = 40.1 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 D CI CG+C+ CP DAI + + Sbjct: 574 YFINDNCIGCGLCKKNCPADAITGEKKEKH 603 >gi|307297600|ref|ZP_07577406.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306916860|gb|EFN47242.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 599 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E C+ C T C VCPV+ I P+ C CG C C AI Sbjct: 547 EKCVGC--TACSRVCPVEAISGSVRKPHEIDPEICTRCGSCLAVCRFGAI 594 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + I ++C+ C C CPV+AI E+ +I Sbjct: 542 VVIDKEKCVGCTACSRVCPVEAISGSVRKPHEIDPEI 578 >gi|296132288|ref|YP_003639535.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296030866|gb|ADG81634.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 297 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V C+ C CV VCP ++ E+ + I D CI C C CP AI + + Sbjct: 102 YKVKMQCMHCNEPSCVAVCPTGAAFKREDGIVLIDGDVCIACRNCVVACPY-AIPGENKE 160 Query: 62 G 62 Sbjct: 161 S 161 >gi|264678371|ref|YP_003278278.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] gi|262208884|gb|ACY32982.1| tetrathionate reductase subunit B [Comamonas testosteroni CNB-2] Length = 241 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + + + C+ CG C CP DA I +T+ + Sbjct: 96 CNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 154 >gi|220904925|ref|YP_002480237.1| NADH-quinone oxidoreductase subunit I [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869224|gb|ACL49559.1| NADH-quinone oxidoreductase, chain I [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 234 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 17/99 (17%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGENF---LAIHPDECIDCGVCEPECPVDA- 54 C+ C C VCP C +G I CI CG C CPV+A Sbjct: 65 GSRCVAC--MRCARVCPSHCIRIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAI 122 Query: 55 ----IKPDTEPGLELWLKINSEYATQWPNITTKKESLPS 89 I + ++ + W +K SL Sbjct: 123 VLTEIYAYAGRTRQEFVFDEAHLLRNWDEFAAEKGSLEG 161 >gi|188587487|ref|YP_001919032.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352174|gb|ACB86444.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 384 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA-IKPDTEPGLE 64 ENC LC+ CV+VCP D Y E + + I+ + C+ CG C C +A I P +E + Sbjct: 198 ENCTLCE--RCVDVCPHDAIYRTEEDQIEINYEICVKCGRCARVCKEEALIVPQSEERFQ 255 Query: 65 L 65 Sbjct: 256 K 256 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 P+ C C C CP DAI TE ++IN E Sbjct: 197 PENCTLCERCVDVCPHDAIYR-TEEDQ---IEINYE 228 >gi|83591015|ref|YP_431024.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573929|gb|ABC20481.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 189 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C VCPV + ++ CI C +C CP I Sbjct: 52 CRHCEDAPCARVCPVKAIEIKNQMVYLNEGLCIGCKMCALVCPFGCI 98 >gi|319949417|ref|ZP_08023479.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Dietzia cinnamea P4] gi|319436914|gb|EFV91972.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Dietzia cinnamea P4] Length = 321 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H CV+VCP E + + D C CG C CP I+ Sbjct: 134 SDVCKHCTHAACVDVCPTGALMHTEFGTVVVQSDICNGCGYCVSACPYGVIE 185 >gi|300897096|ref|ZP_07115558.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300973429|ref|ZP_07172185.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|300993136|ref|ZP_07180222.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|301017308|ref|ZP_07182072.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|301048188|ref|ZP_07195224.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|301325658|ref|ZP_07219119.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|300299946|gb|EFJ56331.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|300305151|gb|EFJ59671.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|300359104|gb|EFJ74974.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300400281|gb|EFJ83819.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300410771|gb|EFJ94309.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|300847513|gb|EFK75273.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|315288770|gb|EFU48168.1| 4Fe-4S binding domain protein [Escherichia coli MS 110-3] gi|315291277|gb|EFU50637.1| 4Fe-4S binding domain protein [Escherichia coli MS 153-1] gi|315297627|gb|EFU56904.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] Length = 289 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 69 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 124 >gi|289191512|ref|YP_003457453.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus sp. FS406-22] gi|288937962|gb|ADC68717.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus sp. FS406-22] Length = 238 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + Y + +N C LC C+ VCP + ++F+ I +C+ CG C+ CP +AI Sbjct: 142 LPYAIDKNKCKLCL--KCINVCPNGAIAKRDDFVEISLPKCLGCGNCKKVCPYNAIIEGK 199 Query: 60 EPGLELWLKINSE 72 E + + KI++E Sbjct: 200 EIKMRVR-KIDAE 211 >gi|157148563|ref|YP_001455882.1| hydrogenase 2 protein HybA [Citrobacter koseri ATCC BAA-895] gi|157085768|gb|ABV15446.1| hypothetical protein CKO_04390 [Citrobacter koseri ATCC BAA-895] Length = 289 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + + D C C C CP + K D Sbjct: 69 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYNKDVCTGCRYCMVACPYNVPKYD 124 >gi|51893193|ref|YP_075884.1| oxidoreductase anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] gi|51856882|dbj|BAD41040.1| oxidoreductase similar to anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] Length = 216 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ C++ CPV+ + + + L IH P CI C C CP + D E G Sbjct: 58 ACNHCEDPACMKGCPVEAYTKRADGLVIHDPTACIGCQYCTWTCPYSVPQFDPEQG 113 >gi|315634304|ref|ZP_07889591.1| hydrogenase-2 operon protein HybA [Aggregatibacter segnis ATCC 33393] gi|315476894|gb|EFU67639.1| hydrogenase-2 operon protein HybA [Aggregatibacter segnis ATCC 33393] Length = 346 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 YV + C+ C +CV VCPV + + PD C C C CP D K D Sbjct: 105 AYVKKQ-CMHCVDPNCVAVCPVQALTKDPKTGIVKYDPDICTGCRYCMVGCPFDVPKYDY 163 Query: 60 E 60 + Sbjct: 164 D 164 >gi|312898191|ref|ZP_07757582.1| ferredoxin [Megasphaera micronuciformis F0359] gi|310620688|gb|EFQ04257.1| ferredoxin [Megasphaera micronuciformis F0359] Length = 54 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +VV++ C+ C C CP EGE + D CIDCG CE CP AI + Sbjct: 2 HVVSDECVKCG--ACEATCPTGAITEGETKYVVG-DACIDCGACESVCPTGAIAAE 54 >gi|296109071|ref|YP_003616020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295433885|gb|ADG13056.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 392 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVT+NC+ CK C+ CPV+ E N + I ++CI C +C CP +AI Sbjct: 135 VVTDNCVGCK--ICIPECPVNAITFNEETNKVEIDKNKCIYCSICAQTCPWNAIY 187 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 V ++C+ CK CVE+CP + E+ L I P C C +C CPV+A++ D E Sbjct: 205 VNEDSCVFCKL--CVEICPGNMIKSDESKLVVIPPKSCPACKLCVNICPVNALELDVE 260 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCF------------YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CILC CV++CP+D E + D C+ C +C PECPV+AI Sbjct: 99 CILCL--KCVDICPIDIISLPGVIEKPKKKIEVPKEPIVVTDNCVGCKICIPECPVNAIT 156 Query: 57 PDTE 60 + E Sbjct: 157 FNEE 160 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP D + + CI CG C CP A+K Sbjct: 283 KKCASVCPTDAIVVDDKNKEV--RMCIVCGACTVACPTGALK 322 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + C++C C E CP NF + CI C C CP A+ +T Sbjct: 8 DLCLVC--YACQEECPTKAIDIDNNF-----NTCILCFRCVEACPTGALSKET 53 >gi|206575826|ref|YP_002238703.1| anaerobic dimethyl sulfoxide reductase, B subunit [Klebsiella pneumoniae 342] gi|288935637|ref|YP_003439696.1| dimethylsulfoxide reductase, chain B [Klebsiella variicola At-22] gi|290509667|ref|ZP_06549038.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella sp. 1_1_55] gi|206564884|gb|ACI06660.1| anaerobic dimethyl sulfoxide reductase, B subunit [Klebsiella pneumoniae 342] gi|288890346|gb|ADC58664.1| dimethylsulfoxide reductase, chain B [Klebsiella variicola At-22] gi|289779061|gb|EFD87058.1| anaerobic dimethyl sulfoxide reductase subunit B [Klebsiella sp. 1_1_55] Length = 205 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C+ C +VCP ++ ++ F+ ++ CI C C CP A + + + Sbjct: 60 AYYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVNEAVCIGCRYCHMACPYGAPQYNAD 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|126699072|ref|YP_001087969.1| putative iron-sulfur protein [Clostridium difficile 630] gi|254975022|ref|ZP_05271494.1| putative iron-sulfur protein [Clostridium difficile QCD-66c26] gi|255092411|ref|ZP_05321889.1| putative iron-sulfur protein [Clostridium difficile CIP 107932] gi|255306435|ref|ZP_05350606.1| putative iron-sulfur protein [Clostridium difficile ATCC 43255] gi|255314150|ref|ZP_05355733.1| putative iron-sulfur protein [Clostridium difficile QCD-76w55] gi|255516828|ref|ZP_05384504.1| putative iron-sulfur protein [Clostridium difficile QCD-97b34] gi|255649929|ref|ZP_05396831.1| putative iron-sulfur protein [Clostridium difficile QCD-37x79] gi|260683084|ref|YP_003214369.1| putative iron-sulfur protein [Clostridium difficile CD196] gi|260686682|ref|YP_003217815.1| putative iron-sulfur protein [Clostridium difficile R20291] gi|306520014|ref|ZP_07406361.1| putative iron-sulfur protein [Clostridium difficile QCD-32g58] gi|115250509|emb|CAJ68333.1| putative iron-sulfur protein [Clostridium difficile] gi|260209247|emb|CBA62547.1| putative iron-sulfur protein [Clostridium difficile CD196] gi|260212698|emb|CBE03782.1| putative iron-sulfur protein [Clostridium difficile R20291] Length = 424 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPEC 50 ENC+ C C+ CP+D +G+ ++ I D C+ CGVC C Sbjct: 293 ENCVKCG--KCITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNC 338 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G + ++KI+ + Sbjct: 290 INHENCVKCGKCITACPIDAISKVKEDG-KEYIKIDED 326 >gi|88706625|ref|ZP_01104328.1| Electron transport complex protein rnfB [Congregibacter litoralis KT71] gi|88699121|gb|EAQ96237.1| Electron transport complex protein rnfB [Congregibacter litoralis KT71] Length = 202 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +++ E+CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 114 AFIIEEDCIGC--TKCIQACPVDAILGAAKQMHTVIASECTGCDLCVDPCPVDCIE 167 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENFL---AIHPDECIDCGVCEPECPVDAI 55 VE P+D + E I ++CI C C CPVDAI Sbjct: 96 VEPTPLDAEHGAETETTVAFIIEEDCIGCTKCIQACPVDAI 136 >gi|332162877|ref|YP_004299454.1| hydrogenase 2 protein HybA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604279|emb|CBY25777.1| hydrogenase-2 operon protein hybA precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325667107|gb|ADZ43751.1| hydrogenase 2 protein HybA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863324|emb|CBX73447.1| hydrogenase-2 operon protein hybA [Yersinia enterocolitica W22703] Length = 342 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP + K D Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYD 168 >gi|255100494|ref|ZP_05329471.1| putative iron-sulfur protein [Clostridium difficile QCD-63q42] Length = 424 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPEC 50 ENC+ C C+ CP+D +G+ ++ I D C+ CGVC C Sbjct: 293 ENCVKCG--KCITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNC 338 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G + ++KI+ + Sbjct: 290 INHENCVKCGKCITACPIDAISKVKEDG-KEYIKIDED 326 >gi|213053234|ref|ZP_03346112.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 212 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|126733437|ref|ZP_01749184.1| 4Fe-4S binding domain protein [Roseobacter sp. CCS2] gi|126716303|gb|EBA13167.1| 4Fe-4S binding domain protein [Roseobacter sp. CCS2] Length = 253 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D + G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRAEDGIVLVNESDCIGCGLCAWACPYGARELDAKEG 137 >gi|325676247|ref|ZP_08155926.1| formate dehydrogenase beta subunit [Rhodococcus equi ATCC 33707] gi|325552808|gb|EGD22491.1| formate dehydrogenase beta subunit [Rhodococcus equi ATCC 33707] Length = 315 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 126 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQNDICNGCGYCIPACPYGVI 176 >gi|293607600|ref|ZP_06689934.1| ferredoxin [Achromobacter piechaudii ATCC 43553] gi|292814033|gb|EFF73180.1| ferredoxin [Achromobacter piechaudii ATCC 43553] Length = 83 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++TE CI C C CP D G+++ I PD+C +C C+ CPV+ Sbjct: 1 MALLITEECINCDV--CEPQCPNDAISMGDDYYVIDPDKCTECVGHHDEPQCKVVCPVEC 58 Query: 55 IK--PDTEPGLEL 65 I+ P G E Sbjct: 59 IELHPQWNEGQEQ 71 >gi|222836452|gb|EEE74859.1| predicted protein [Populus trichocarpa] Length = 217 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV Y+ ++ + I CI C C CP DA I +T+ + Sbjct: 97 CNHCDNPPCVPVCPVQATYQRKDGIVVIDNKRCIGCAYCVQACPYDARFINSETKTADK 155 >gi|167771401|ref|ZP_02443454.1| hypothetical protein ANACOL_02767 [Anaerotruncus colihominis DSM 17241] gi|167666041|gb|EDS10171.1| hypothetical protein ANACOL_02767 [Anaerotruncus colihominis DSM 17241] Length = 403 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 YV C+ C C C D +I +C+ CG C CPVDA++ Sbjct: 225 PYVEQSVCVGCG--MCKRNCAHDAIAITNRKASIDHSKCVGCGRCIGACPVDAVQA---A 279 Query: 62 GLELWLKINSEYAT 75 E + +N + + Sbjct: 280 QDEAFDILNKKISE 293 >gi|24375548|ref|NP_719591.1| polysulfide reductase, subunit B [Shewanella oneidensis MR-1] gi|24350427|gb|AAN57035.1|AE015837_7 polysulfide reductase, subunit B [Shewanella oneidensis MR-1] Length = 188 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPY 104 >gi|89519313|gb|ABD75790.1| iron-sulfur cluster-binding protein [uncultured bacterium] Length = 380 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV+E CI C C + CPV E I CI C C CP DAI+ Sbjct: 318 VVSEKCIGCGF--CRDACPVQVISMVEKHAEIKQRHCIHCYCCHEMCPHDAIE 368 >gi|15602251|ref|NP_245323.1| electron transport complex protein RnfB [Pasteurella multocida subsp. multocida str. Pm70] gi|17368782|sp|Q9CNP1|RNFB_PASMU RecName: Full=Electron transport complex protein rnfB gi|12720633|gb|AAK02470.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 198 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I PD C C +C P CP D I Sbjct: 108 AFIDEDMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVPPCPTDCI 160 >gi|95931130|ref|ZP_01313855.1| sigma54 specific transcriptional regulator, Fis family [Desulfuromonas acetoxidans DSM 684] gi|95132820|gb|EAT14494.1| sigma54 specific transcriptional regulator, Fis family [Desulfuromonas acetoxidans DSM 684] Length = 762 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA-IKPDTEP 61 V E C C CV CPV N+ I+P CI CG C C A I D+ Sbjct: 7 TVKERCRKC--YACVRNCPVKAIKVKANYAEVIYP-RCIGCGKCIAVCTQKAKIIADSSE 63 Query: 62 GLELWLK 68 +L Sbjct: 64 ETRQFLA 70 >gi|300815520|ref|ZP_07095744.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300821581|ref|ZP_07101727.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300905875|ref|ZP_07123608.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300916895|ref|ZP_07133598.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300923654|ref|ZP_07139682.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300931882|ref|ZP_07147179.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|300935656|ref|ZP_07150629.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300950798|ref|ZP_07164684.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300958379|ref|ZP_07170520.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|301304180|ref|ZP_07210296.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301643637|ref|ZP_07243678.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|309793561|ref|ZP_07687987.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|300314963|gb|EFJ64747.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300402344|gb|EFJ85882.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300415865|gb|EFJ99175.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300420095|gb|EFK03406.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300449893|gb|EFK13513.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300459156|gb|EFK22649.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300460305|gb|EFK23798.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|300525719|gb|EFK46788.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300531449|gb|EFK52511.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300840593|gb|EFK68353.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301078021|gb|EFK92827.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|308122518|gb|EFO59780.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|315256897|gb|EFU36865.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|324018159|gb|EGB87378.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] Length = 289 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 69 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 124 >gi|57642010|ref|YP_184488.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] gi|57160334|dbj|BAD86264.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] Length = 168 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 NC C+ C++VCP Y + I +P++CI C +C CP D + Sbjct: 47 NCRHCEKAPCMDVCPAGAIYRDSDGAVIINPNKCIGCLMCLAACPFGVPTFDVK 100 >gi|331000390|ref|ZP_08324069.1| hydrogenase, Fe-only [Parasutterella excrementihominis YIT 11859] gi|329571980|gb|EGG53652.1| hydrogenase, Fe-only [Parasutterella excrementihominis YIT 11859] Length = 447 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 ++ +NC+ C C + CPVD G + I D C+ CG C CP AI+ Sbjct: 34 HINKDNCVGCD--TCRKFCPVDAISGGLGAIHKIRDDACVSCGQCLSACPFGAIEQ 87 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 + I+ D C+ C C CPVDAI Sbjct: 33 IHINKDNCVGCDTCRKFCPVDAI 55 >gi|299131979|ref|ZP_07025174.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] gi|298592116|gb|EFI52316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Afipia sp. 1NLS2] Length = 252 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI C +C CP A + D + G Sbjct: 79 SCLHCEEPACVTVCPTGASYKRTEDGIVLVNADTCIGCKLCSWACPYGAREFDEDDG 135 >gi|225175529|ref|ZP_03729523.1| nitrite and sulphite reductase 4Fe-4S region [Dethiobacter alkaliphilus AHT 1] gi|225168858|gb|EEG77658.1| nitrite and sulphite reductase 4Fe-4S region [Dethiobacter alkaliphilus AHT 1] Length = 285 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +CI C C + CP + + AI ++CI CG C CP +A Sbjct: 164 DCISCGL--CADTCPSGAITMEDGYPAIDREKCIHCGECVAVCPTEA 208 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 13/63 (20%) Query: 18 VEVCPVDCFYEGENFL----AIHP----DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 V CP C EN I P ++CI CG+C CP AI + + I Sbjct: 135 VTGCPRSCAKPQENDFGFIGVIKPKFKQNDCISCGLCADTCPSGAITMED-----GYPAI 189 Query: 70 NSE 72 + E Sbjct: 190 DRE 192 >gi|310777929|ref|YP_003966262.1| dihydroorotate dehydrogenase family protein [Ilyobacter polytropus DSM 2926] gi|309747252|gb|ADO81914.1| dihydroorotate dehydrogenase family protein [Ilyobacter polytropus DSM 2926] Length = 366 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 E CI C C ++CP + EN L I D+C CGVC +CP DA Sbjct: 315 EKCIGCG--ICADLCPYHAIHINENKLAVIDADKCFGCGVCVSKCPKDA 361 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 37 PDECIDCGVCEPECPVDAIK 56 ++CI CG+C CP AI Sbjct: 314 KEKCIGCGICADLCPYHAIH 333 >gi|301027422|ref|ZP_07190759.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 69-1] gi|300394930|gb|EFJ78468.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 69-1] Length = 644 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|269925728|ref|YP_003322351.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789388|gb|ACZ41529.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 279 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C C+EVCP E + + I D C C C CP I Sbjct: 86 SDVCKHCVQAGCLEVCPTGAIIRTEYDTVVIQSDVCNGCRACIAACPFGVI 136 >gi|225619304|ref|YP_002720530.1| hypothetical protein BHWA1_00357 [Brachyspira hyodysenteriae WA1] gi|225214123|gb|ACN82857.1| hypothetical protein BHWA1_00357 [Brachyspira hyodysenteriae WA1] Length = 55 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M V+ +C+ C C+ C D EG N I PD+C DC CE CP +AI P Sbjct: 1 MPRVINNDCVACG--SCLPECAFDAISEG-NIYVIDPDKCTDCAACEAVCPSNAINP 54 >gi|162452617|ref|YP_001614984.1| hypothetical protein sce4341 [Sorangium cellulosum 'So ce 56'] gi|161163199|emb|CAN94504.1| hypothetical protein sce4341 [Sorangium cellulosum 'So ce 56'] Length = 785 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 +C C+ C+ CP + D C CG C CP + I Sbjct: 373 SCQHCESPACMIECPTGAIGKDTGGEVFIRDALCTGCGACAKACPWENI 421 >gi|289676762|ref|ZP_06497652.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae FF5] Length = 291 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGASRLMHTVII-DECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|16761444|ref|NP_457061.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140859|ref|NP_804201.1| anaerobic reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213425326|ref|ZP_03358076.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580857|ref|ZP_03362683.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612662|ref|ZP_03370488.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213857321|ref|ZP_03384292.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25285325|pir||AH0822 probable anaerobic reductase component STY2774 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503744|emb|CAD02732.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi] gi|29136484|gb|AAO68050.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 209 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|238790269|ref|ZP_04634043.1| Hydrogenase-2 operon protein hybA [Yersinia frederiksenii ATCC 33641] gi|238721619|gb|EEQ13285.1| Hydrogenase-2 operon protein hybA [Yersinia frederiksenii ATCC 33641] Length = 346 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + PD C C C CP + K D + Sbjct: 107 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYDYD 164 >gi|322613726|gb|EFY10665.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619531|gb|EFY16407.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625036|gb|EFY21865.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629521|gb|EFY26297.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634048|gb|EFY30785.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635514|gb|EFY32225.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639810|gb|EFY36489.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644432|gb|EFY40973.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648577|gb|EFY45026.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322658250|gb|EFY54516.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664251|gb|EFY60448.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669418|gb|EFY65567.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673145|gb|EFY69251.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676537|gb|EFY72605.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683287|gb|EFY79301.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685827|gb|EFY81820.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194770|gb|EFZ79958.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199542|gb|EFZ84633.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204683|gb|EFZ89681.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208131|gb|EFZ93076.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210938|gb|EFZ95800.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217013|gb|EGA01735.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221811|gb|EGA06215.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229299|gb|EGA13423.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235386|gb|EGA19470.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237428|gb|EGA21491.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245182|gb|EGA29183.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248885|gb|EGA32811.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253172|gb|EGA37004.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255406|gb|EGA39174.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262035|gb|EGA45600.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266346|gb|EGA49834.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269823|gb|EGA53273.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 209 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|300936167|ref|ZP_07151103.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 21-1] gi|300458624|gb|EFK22117.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 21-1] Length = 644 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|238793441|ref|ZP_04637066.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia intermedia ATCC 29909] gi|238727214|gb|EEQ18743.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia intermedia ATCC 29909] Length = 161 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + + ++CI C C CP A Sbjct: 38 CRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 83 >gi|189460038|ref|ZP_03008823.1| hypothetical protein BACCOP_00674 [Bacteroides coprocola DSM 17136] gi|189433199|gb|EDV02184.1| hypothetical protein BACCOP_00674 [Bacteroides coprocola DSM 17136] Length = 321 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P +C C CE ECP +AI Sbjct: 218 TAACIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCETECPQNAI 265 Score = 41.3 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVSACQFDAIHMNPETGLPEVDESKCTACGACSKACPRNIIE 189 >gi|145298774|ref|YP_001141615.1| hydrogenase 2 protein HybA [Aeromonas salmonicida subsp. salmonicida A449] gi|142851546|gb|ABO89867.1| hydrogenase-2 small subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 348 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + P C C C CP D K D + Sbjct: 111 IKKQCMHCVDPNCVSVCPVQALTKDPKTGIVHYDPSVCTGCRYCMVGCPFDVPKYDYDNP 170 Query: 63 L 63 L Sbjct: 171 L 171 >gi|293406385|ref|ZP_06650311.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1412] gi|298382121|ref|ZP_06991718.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1302] gi|300896219|ref|ZP_07114768.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 198-1] gi|291426391|gb|EFE99423.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1412] gi|298277261|gb|EFI18777.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1302] gi|300359953|gb|EFJ75823.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 198-1] Length = 644 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|283786992|ref|YP_003366857.1| oxidoreductase, 4Fe-4S subunit [Citrobacter rodentium ICC168] gi|282950446|emb|CBG90108.1| putative oxidoreductase, 4Fe-4S subunit [Citrobacter rodentium ICC168] Length = 158 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV+ CPV G + CI C C CP AI +T GL Sbjct: 51 CHQCENAPCVKACPVGALTMGPERVEADAGRCIACQSCVVACPFGAITIETPVGL 105 >gi|257065409|ref|YP_003145081.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256793062|gb|ACV23732.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 211 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y VT C C++ +CV+VCP + + E+ I +CI C C CP + E Sbjct: 59 YFVTVGCQHCENPECVKVCPTEASHIAEDGTIQIDKAKCIGCQFCVMACPYGVRYLNEEE 118 >gi|251792563|ref|YP_003007289.1| hydrogenase 2 protein HybA [Aggregatibacter aphrophilus NJ8700] gi|247533956|gb|ACS97202.1| HybA protein [Aggregatibacter aphrophilus NJ8700] Length = 346 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + PD C C C CP D K D + Sbjct: 107 IKKQCMHCVDPNCVAVCPVQALTKDPKTGIVKYDPDICTGCRYCMVGCPFDVPKYDYD 164 >gi|227887703|ref|ZP_04005508.1| formate-dependent nitrite reductase [Fe-S] protein [Escherichia coli 83972] gi|227835099|gb|EEJ45565.1| formate-dependent nitrite reductase [Fe-S] protein [Escherichia coli 83972] gi|307555091|gb|ADN47866.1| hydrogenase-2 electron transfer subunit [Escherichia coli ABU 83972] Length = 328 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +C+ VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCISVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|168243309|ref|ZP_02668241.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466719|ref|ZP_02700573.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443941|ref|YP_002041787.1| dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450531|ref|YP_002046587.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194402604|gb|ACF62826.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408835|gb|ACF69054.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630698|gb|EDX49290.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205337679|gb|EDZ24443.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 209 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|161612711|ref|YP_001586676.1| hypothetical protein SPAB_00409 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197250854|ref|YP_002147482.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|161362075|gb|ABX65843.1| hypothetical protein SPAB_00409 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197214557|gb|ACH51954.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 209 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|156974788|ref|YP_001445695.1| hypothetical protein VIBHAR_02506 [Vibrio harveyi ATCC BAA-1116] gi|156526382|gb|ABU71468.1| hypothetical protein VIBHAR_02506 [Vibrio harveyi ATCC BAA-1116] Length = 209 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C + C +VCP + E + F+ + CI C C CP A + Sbjct: 62 AYYLSISCNHCINPACTKVCPSGAMHKREEDGFVVVDESVCIGCKSCHMACPYGAPQYSE 121 Query: 60 EPGL 63 E G Sbjct: 122 EKGH 125 >gi|123443798|ref|YP_001007769.1| hydrogenase 2 protein HybA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090759|emb|CAL13636.1| hydrogenase-2 operon protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 342 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP + K D Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYD 168 >gi|301064797|ref|ZP_07205171.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441091|gb|EFK05482.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 254 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 Y+ E C C C CPVD G+N + I ++CI CG C CP Sbjct: 176 YIDPEKCKAC--MICARSCPVDAIVGGKNLIHVIDQEKCIKCGTCFEACP 223 Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 I P++C C +C CPVDAI Sbjct: 175 YYIDPEKCKACMICARSCPVDAI 197 >gi|253701244|ref|YP_003022433.1| formate dehydrogenase transmembrane domain protein [Geobacter sp. M21] gi|251776094|gb|ACT18675.1| Formate dehydrogenase transmembrane domain protein [Geobacter sp. M21] Length = 263 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 7 ENCILCKHTDCVEVCPV-DCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ C C++VCP Y E + + ++CI C C CP + + D++ Sbjct: 79 QRCMHCGDAGCIKVCPAPGALYRTKEGSVVFNKEKCISCKYCVSACPFNVPRYDSDD 135 >gi|194474799|gb|ACF74512.1| arsenate respiratory reductase iron sulfur subunit [Halarsenatibacter silvermanii] Length = 229 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 9 CILCKHTDCVEVCPVDC---FYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CVE CPVD F + E+ L + D CI C CE ECP I + E Sbjct: 58 CNHCDNAPCVEACPVDPKAIFKDSESNLVLMDADRCIGCRNCENECPYGVISYNAEEAHP 117 Query: 65 LW 66 W Sbjct: 118 FW 119 >gi|119776748|ref|YP_929488.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] gi|119769248|gb|ABM01819.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 580 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+NC LC CV +CP +G + L C+ CG+CE CP I Sbjct: 445 VATDNCTLC--MSCVAICPTAALKDGGDEPKLLFTEQNCVQCGLCEAACPEKVI 496 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D E + I P C G C CP AI D L +N Sbjct: 225 CLNFCPADAIQSVEKKIEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSFLNKLVSRF 284 Query: 71 SEYATQWPNI 80 + A + P I Sbjct: 285 RDEALEAPVI 294 >gi|114563171|ref|YP_750684.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114334464|gb|ABI71846.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 190 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV VCP Y EN L IH D+C+ C C CP Sbjct: 59 SCQQCEDAPCVSVCPTGAAYIDENGLVSIHNDKCVGCMYCVAACPY 104 >gi|315179710|gb|ADT86624.1| tetrathionate reductase, subunit B [Vibrio furnissii NCTC 11218] Length = 255 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + + C C + CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 102 AFTLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|312138684|ref|YP_004006020.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodococcus equi 103S] gi|311888023|emb|CBH47335.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodococcus equi 103S] Length = 315 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 126 SDVCKHCTHAACLDVCPTGALFRTEFGTVVVQNDICNGCGYCLPACPYGVI 176 >gi|289191766|ref|YP_003457707.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938216|gb|ADC68971.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 260 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVE CP++ + + + I+ D+CI CG C CP +AIK Sbjct: 209 CVGC--FVCVEECPINAIEQEGDKVKINKDKCILCGRCADVCPANAIK 254 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ CI C C + CPVD + + I D+C+ C +C CPV AI Sbjct: 50 YINETKCIRCNL--CYKECPVDAIEKAKVKKSAKIIEDKCVKCEICAQTCPVGAIY 103 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 10/63 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-------HPDECIDCGVCEPECPVDAI 55 V + C+ C C EVCP C E E I + C+ C VC ECP++AI Sbjct: 167 VNLDLCMGCG--ACAEVCPKKCIKVERELGEVIKTRDIEVDKNLCVGCFVCVEECPINAI 224 Query: 56 KPD 58 + + Sbjct: 225 EQE 227 Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 28/79 (35%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--------------------------HP 37 ++ + C+ C+ C + CPV Y E I Sbjct: 82 IIEDKCVKCE--ICAQTCPVGAIYVIEGRAEIEDSEVHYTIKEKSIPHRKIRLKRYELDE 139 Query: 38 DECIDCGVCEPECPVDAIK 56 + CI CG+C CP +AIK Sbjct: 140 NTCIKCGICARFCPTNAIK 158 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I+ +CI C +C ECPVDAI+ Sbjct: 49 LYINETKCIRCNLCYKECPVDAIE 72 >gi|260893719|ref|YP_003239816.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] gi|260865860|gb|ACX52966.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ammonifex degensii KC4] Length = 1016 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C CV +CP + + I+ C CGVC CP AI +++ Sbjct: 951 CSGC--RICVNLCPYNAISFDDVNKVSVINEAVCKGCGVCAAACPSKAITMGGFTDEQIF 1008 Query: 67 LKINSEYA 74 +I + + Sbjct: 1009 AEIEALLS 1016 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 15/36 (41%) Query: 24 DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 D G + P +C C +C CP +AI D Sbjct: 935 DAILAGGIVSKVDPAKCSGCRICVNLCPYNAISFDD 970 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 26/92 (28%), Gaps = 35/92 (38%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECID-- 42 YV E C+ C C CPV D F EG I +C+ Sbjct: 102 YVDPEKCVACGD--CAAKCPVKVKDEFNEGLGERKAIFIKYSQAVPAAYMIDATKCLRIL 159 Query: 43 -------------CGVCEPECPVDAIKPDTEP 61 CG+C C AI D Sbjct: 160 HAEKAKAAGKEPPCGLCAKACQRGAINFDDTE 191 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWP 78 + P++C+ CG C +CPV +K + GL I +Y+ P Sbjct: 102 YVDPEKCVACGDCAAKCPVK-VKDEFNEGLGERKAIFIKYSQAVP 145 >gi|237736266|ref|ZP_04566747.1| electron transport complex protein [Fusobacterium mortiferum ATCC 9817] gi|229421614|gb|EEO36661.1| electron transport complex protein [Fusobacterium mortiferum ATCC 9817] Length = 329 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 I C C + CPV N I P +CI CG+C +CP AI D EP ++ Sbjct: 219 IGCG--ICAKNCPVGAITVENNLAKIDPAKCISCGICATKCPTKAIVSDVEPKKAEIIEE 276 Query: 70 N 70 N Sbjct: 277 N 277 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 H DC +VCPV E + + D+CI CG+C+ CP I Sbjct: 145 GHGDCEKVCPVGAIKVNEKGIAEVDEDKCISCGLCQKACPKKVI 188 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ ENC C T C CPV + + ++C+ CG+C C AIK Sbjct: 273 IIEENCKGC--TACARKCPVGAIEGAVKEKHHVITEKCVGCGICFDTCKFKAIK 324 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP I + C C C +CPV AI+ Sbjct: 247 CISCG--ICATKCPTKAIVSDVEPKKAEIIEENCKGCTACARKCPVGAIE 294 >gi|224368284|ref|YP_002602447.1| HdrA1 [Desulfobacterium autotrophicum HRM2] gi|223691000|gb|ACN14283.1| HdrA1 [Desulfobacterium autotrophicum HRM2] Length = 1016 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 28/91 (30%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEGENF---------------LAIHPDECI--- 41 YV + CI C C E CP D + EG N+ AI PD CI Sbjct: 103 YVDEDKCIACGL--CAEKCPKKVPDEYNEGLNYRKAAYIKYGQTVPLKYAIDPDNCIMIN 160 Query: 42 --DCGVCEPECPVDAIKPDTEPGLELWLKIN 70 CGVC CP AI + +P ++ +N Sbjct: 161 KGKCGVCAKICPTGAINFEMKPE---FVDVN 188 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 10/75 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDE--CIDCGVCEPECPVDAIK 56 VT+NC C C++VCP + G+ I D C CG+C CP + I Sbjct: 939 VTQNCDGC--ALCLDVCPYNALTLVEFEENGKQHRRIKTDRALCKGCGICAATCPKEGIV 996 Query: 57 PDTEPGLELWLKINS 71 D +L ++++ Sbjct: 997 VDGFTPGQLRAQVDA 1011 >gi|59713264|ref|YP_206039.1| oxidoreductase, Fe-S subunit [Vibrio fischeri ES114] gi|197337765|ref|YP_002157662.1| dimethylsulfoxide reductase, chain B [Vibrio fischeri MJ11] gi|59481512|gb|AAW87151.1| oxidoreductase, Fe-S subunit [Vibrio fischeri ES114] gi|197315017|gb|ACH64466.1| dimethylsulfoxide reductase, chain B [Vibrio fischeri MJ11] Length = 204 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ C C C +VCP ++ E+ F+ + + CI C C CP A + + E Sbjct: 59 SYYLSIACNHCDEPACTKVCPSGAMHKREDGFVVVDEEVCIGCKYCTMACPYGAPQYNEE 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|219668159|ref|YP_002458594.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219538419|gb|ACL20158.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 421 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 7/57 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + CI C C +VCPV EG+ + + C+ CG+C CP I+ Sbjct: 290 IAQECIGCG--KCEKVCPVLAISMSTNAEGKKVAQVDHEVCLGCGICVRSCPKKVIE 344 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 N+L ECI CG CE CPV AI T + +++ E Sbjct: 283 TTNYLPKIAQECIGCGKCEKVCPVLAISMSTNAEGKKVAQVDHE 326 >gi|303257427|ref|ZP_07343440.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] gi|331000028|ref|ZP_08323724.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|302859784|gb|EFL82862.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] gi|329573176|gb|EGG54793.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 306 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 +C C + CV VCP C EN + + P++CI C CE CP D + Sbjct: 85 SCFHCTNAGCVTVCPTGCLKYEENGVVSVSPEKCIGCRYCEMACPFDVPRY 135 >gi|260768009|ref|ZP_05876943.1| tetrathionate reductase subunit B [Vibrio furnissii CIP 102972] gi|260616039|gb|EEX41224.1| tetrathionate reductase subunit B [Vibrio furnissii CIP 102972] Length = 255 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + + C C + CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 102 AFTLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|291326372|ref|ZP_06573930.1| tetrathionate reductase complex, subunit B [Providencia rettgeri DSM 1131] gi|291314566|gb|EFE55019.1| tetrathionate reductase complex, subunit B [Providencia rettgeri DSM 1131] Length = 252 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C + CV VCPV ++ E+ + + + C+ C C CP DA Sbjct: 107 CNHCDNPPCVPVCPVQATFQREDGIVVVDNERCVGCAYCVQACPYDA 153 >gi|167761070|ref|ZP_02433197.1| hypothetical protein CLOSCI_03468 [Clostridium scindens ATCC 35704] gi|167661304|gb|EDS05434.1| hypothetical protein CLOSCI_03468 [Clostridium scindens ATCC 35704] Length = 159 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Query: 1 MTY-----VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 M Y V C+ C+ C+EVCPV + E + + I+PD+CI C +C CP+ Sbjct: 40 MAYEEAAISVPMMCMQCEEPCCMEVCPVGAIFRDEKDAVIINPDKCIGCKMCMNACPLGN 99 Query: 55 IKPDTEPGL 63 I +TE Sbjct: 100 IGFNTERRQ 108 >gi|86605090|ref|YP_473853.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab] gi|86553632|gb|ABC98590.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab] Length = 75 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCVE CPV C + G+ ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTDICEGV--ADCVEACPVACIHPGDGKNAKGTDYFWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI P+ +P L+ Sbjct: 59 EGAILPEEKPHLQ 71 >gi|326560090|gb|EGE10480.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis 46P47B1] gi|326564196|gb|EGE14432.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis 12P80B1] Length = 275 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 117 DCIGC--TKCIPACPVDAIVGTAKHMHSIITDLCTGCELCLAPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +CI C C P CPVDAI Sbjct: 113 IQEADCIGCTKCIPACPVDAI 133 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M ++T+ C C+ C+ CPVDC Sbjct: 140 MHSIITDLCTGCEL--CLAPCPVDCI 163 >gi|312136492|ref|YP_004003829.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] gi|311224211|gb|ADP77067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] Length = 164 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C CK+ CVE CP + D+CI CG C ECP AI + L Sbjct: 44 CHHCKNAPCVEACPTGAM----KINYVDTDKCIGCGSCALECPFGAISIKNNVAHKCNLC 99 Query: 69 INSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSP 106 N +Y TK +L K +K+K E+Y + Sbjct: 100 DNLDYPACVRACPTKALTLIDVEKF--IKRKKEEYLNK 135 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 18/57 (31%), Gaps = 11/57 (19%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG-----VCEPECPVDA 54 YV T+ CI C C CP N +C C C CP A Sbjct: 65 YVDTDKCIGCG--SCALECPFGAISIKNNVAH----KCNLCDNLDYPACVRACPTKA 115 >gi|294141483|ref|YP_003557461.1| hypothetical protein SVI_2712 [Shewanella violacea DSS12] gi|293327952|dbj|BAJ02683.1| hypothetical protein [Shewanella violacea DSS12] Length = 683 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE-GENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 ++ C C C++ CP + + E + P+ C CG C CP +A + D Sbjct: 154 ISMACNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLD 209 >gi|78221547|ref|YP_383294.1| twin-arginine translocation pathway signal [Geobacter metallireducens GS-15] gi|78192802|gb|ABB30569.1| tetrathionate reductase beta subunit [Geobacter metallireducens GS-15] Length = 260 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ + + + CI C C CP Sbjct: 126 AFFVPKLCNQCDNPACVQVCPVGATYQTPDGVVLVDRKHCIGCAYCIMACPYG 178 >gi|15219265|ref|NP_178022.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) [Arabidopsis thaliana] gi|297842689|ref|XP_002889226.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial [Arabidopsis lyrata subsp. lyrata] gi|3929364|sp|Q42599|NDUS8_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=Complex I-28.5kD; Short=CI-28.5kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|666977|emb|CAA59061.1| NADH dehydrogenase [Arabidopsis thaliana] gi|3152573|gb|AAC17054.1| Match to NADH:ubiquinone oxidoreductase gb|X84318 from A.thaliana. ESTs gb|Z27005, gb|T04711, gb|T45078 and gb|Z28689 come from this gene [Arabidopsis thaliana] gi|15081697|gb|AAK82503.1| At1g79010/YUP8H12R_21 [Arabidopsis thaliana] gi|18252265|gb|AAL62013.1| At1g79010/YUP8H12R_21 [Arabidopsis thaliana] gi|21593880|gb|AAM65847.1| NADH dehydrogenase, putative [Arabidopsis thaliana] gi|110740838|dbj|BAE98516.1| hypothetical protein [Arabidopsis thaliana] gi|297335067|gb|EFH65485.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial [Arabidopsis lyrata subsp. lyrata] gi|332198072|gb|AEE36193.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8 [Arabidopsis thaliana] Length = 222 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAVCPAQAITIEAEERED 147 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|219667254|ref|YP_002457689.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537514|gb|ACL19253.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 197 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C++ CV+VCPV + E+ + I D CI C C CP DA I P+ + Sbjct: 59 CNHCENPSCVKVCPVKATTQKEDGTVVIDYDLCIGCKYCIAACPYDARFINPERRTAEK 117 >gi|262382202|ref|ZP_06075340.1| F420H2:quinone oxidoreductase [Bacteroides sp. 2_1_33B] gi|262297379|gb|EEY85309.1| F420H2:quinone oxidoreductase [Bacteroides sp. 2_1_33B] Length = 415 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Query: 1 MTYVVTE--NCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV 52 M + +T+ +C C CV+ CP C E+ FL + CIDCG+CE CPV Sbjct: 1 MIH-ITDKRDCCGCN--SCVQRCPKSCIRMREDDEGFLYPEVDESVCIDCGLCEKVCPV 56 >gi|220909526|ref|YP_002484837.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 7425] gi|219866137|gb|ACL46476.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7425] Length = 75 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT C DCV+ CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MAHTIVTNTCEGV--ADCVDACPVACIHPGPAKNLKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ L+ Sbjct: 59 EGAIIPEERSDLQQ 72 >gi|116748266|ref|YP_844953.1| response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Syntrophobacter fumaroxidans MPOB] gi|116697330|gb|ABK16518.1| response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Syntrophobacter fumaroxidans MPOB] Length = 1139 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 20/73 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCGVCEP 48 E C C +C VCPV+ E N I D C CG C+ Sbjct: 116 ERCNGCG--ECTRVCPVEVPDEFNAGLATRKAVYLPVPHNLPNSYVIDTDACNHCGACQN 173 Query: 49 ECPVDAIKPDTEP 61 CP AI + E Sbjct: 174 ACPTGAIDLNLEA 186 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C LC+ CV CP + E E + + C CG C CP A Sbjct: 1074 CSLCE--RCVVACPFHARWYDEEEERIVVDEFVCQGCGACSAACPNGA 1119 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 11/42 (26%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 I P+ C CG C CPV+ PD + N+ AT+ Sbjct: 113 IDPERCNGCGECTRVCPVEV--PD---------EFNAGLATR 143 >gi|254439365|ref|ZP_05052859.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] gi|198254811|gb|EDY79125.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 307] Length = 242 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D E Sbjct: 59 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMDAEA 114 >gi|157145943|ref|YP_001453262.1| hypothetical protein CKO_01696 [Citrobacter koseri ATCC BAA-895] gi|157083148|gb|ABV12826.1| hypothetical protein CKO_01696 [Citrobacter koseri ATCC BAA-895] Length = 243 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + CI C C CP + P T+ Sbjct: 111 QSCQHCEDAPCIDVCPTGASWRDERGIVRVDESRCIGCSYCIGACPYQVRYLNPQTKVAD 170 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 171 KCDFCAESRLAKGFPPICV--NACPEHALIFGREDSPE 206 >gi|119511224|ref|ZP_01630340.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] gi|119464102|gb|EAW45023.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] Length = 74 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +EG ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTDVCEGV--ADCVDACPVACIHEGPGKNVKGTDWYWIDFATCIDCGICIEVCPV 58 Query: 53 -DAIKPDTEPGLEL 65 DAI P+ L+ Sbjct: 59 ADAIVPEERSDLQK 72 >gi|91203805|emb|CAJ71458.1| similar to NADH:ubiquinone oxidoreductase 51 kDa subunit [Candidatus Kuenenia stuttgartiensis] Length = 594 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ E C C C + CPVD E + I CI CG+C C DAI Sbjct: 541 VIEEACTGC--HLCYKNCPVDAITGETKKVHHIDQKICIKCGMCYEVCKFDAI 591 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C E F I + C C +C CPVDAI +T+ Sbjct: 528 CRAGVCKELIKFSVI-EEACTGCHLCYKNCPVDAITGETK 566 >gi|56387326|gb|AAV86075.1| uptake hydrogenase [Clostridium saccharoperbutylacetonicum ATCC 27021] Length = 624 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C + C +VCPV + I ++CI CG C CP AIK D Sbjct: 576 CKGC--SKCSKVCPVGAISGKIKEPFVIDQNKCIKCGACLETCPFKAIKED 624 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I P C C C CPV AI Sbjct: 571 IDPSMCKGCSKCSKVCPVGAI 591 >gi|312143460|ref|YP_003994906.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium sp. 'sapolanicus'] gi|311904111|gb|ADQ14552.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium sp. 'sapolanicus'] Length = 331 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C + CV+ CPVD +N I ++C+DCG+C +CP I+ E Sbjct: 217 CIAC--SLCVKACPVDAIEMKDNLAVIDYEKCVDCGICAEKCPTGTIEFQGE 266 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DC +CP D +N L I PD C CG C ECP Sbjct: 144 GFGDCKVICPFDAIIMNDNGLPEIDPDVCTGCGKCIEECP 183 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + +NC+ C T C + CPVD L I + CI CG+C C VDA+ Sbjct: 273 INDNCVGC--TLCAKACPVDAVEGEIKKLHKIDQNLCIQCGLCYEACNVDAV 322 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 25/78 (32%), Gaps = 18/78 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH----------------PDECIDCGVCEPEC 50 + C C C+E CP + H CI C +C C Sbjct: 170 DVCTGCG--KCIEECPRNILLLAPYKSKNHIRCSSHNIGKIVRKTCEVGCIACSLCVKAC 227 Query: 51 PVDAIKPDTEPGLELWLK 68 PVDAI+ + + K Sbjct: 228 PVDAIEMKDNLAVIDYEK 245 >gi|296163947|ref|ZP_06846582.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900702|gb|EFG80073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 95 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 3 YVVTENCILCKHTDCVEVCP--VDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 + + + CI C C CP VD + + I DECIDCG C P CPVD I Sbjct: 9 FYIDDTCIGCG--ACEHSCPGRVDAISKKADDFLGRFVIDLDECIDCGKCVPLCPVDCIH 66 Query: 57 P 57 Sbjct: 67 D 67 >gi|291085425|ref|ZP_06353063.2| protein NrfC [Citrobacter youngae ATCC 29220] gi|291070960|gb|EFE09069.1| protein NrfC [Citrobacter youngae ATCC 29220] Length = 239 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++C C C+EVCP + EN + + CI C C CP + + Sbjct: 107 QSCQHCDDAPCIEVCPTGASWRDENGIVRVDKSSCIGCSYCIGACPYQVRYLNPRTKVAD 166 Query: 66 WLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYE 101 +E A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--NACPEHALIFGREDSPE 202 >gi|254452377|ref|ZP_05065814.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 238] gi|198266783|gb|EDY91053.1| 4Fe-4S binding domain protein [Octadecabacter antarcticus 238] Length = 268 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D E Sbjct: 86 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMDAEA 141 >gi|161527803|ref|YP_001581629.1| ATPase RIL [Nitrosopumilus maritimus SCM1] gi|160339104|gb|ABX12191.1| ABC transporter related [Nitrosopumilus maritimus SCM1] Length = 595 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 1 MTYVVT----ENCI--LCKHTDCVEVCPV-----DCF--YEGENFLAIHPDECIDCGVCE 47 MT+ V E C C +C++ CPV DC E I D C CG+C Sbjct: 1 MTHRVGVLDHELCQPKKCG-LECIKYCPVNKSGADCIVLNEESKKAQIDEDICNGCGICV 59 Query: 48 PECPVDAI 55 CP DAI Sbjct: 60 KVCPFDAI 67 >gi|296113097|ref|YP_003627035.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis RH4] gi|295920791|gb|ADG61142.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis RH4] gi|326560473|gb|EGE10855.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis 7169] gi|326565795|gb|EGE15957.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis BC1] gi|326570448|gb|EGE20488.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis BC8] gi|326571131|gb|EGE21155.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis BC7] gi|326577145|gb|EGE27039.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis O35E] Length = 275 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 117 DCIGC--TKCIPACPVDAIVGTAKHMHSIITDLCTGCELCLAPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +CI C C P CPVDAI Sbjct: 113 IQEADCIGCTKCIPACPVDAI 133 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M ++T+ C C+ C+ CPVDC Sbjct: 140 MHSIITDLCTGCEL--CLAPCPVDCI 163 >gi|218780880|ref|YP_002432198.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762264|gb|ACL04730.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 366 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E+C+ C C E C + E ++PDECI CGVC CP A+K Sbjct: 288 VAGEDCVGCG--TCTERCFFNALTVDEETERAVVNPDECIGCGVCALGCPTGALK 340 >gi|330949992|gb|EGH50252.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae Cit 7] Length = 291 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGASKLMHTVII-DECTGCDLCVAPCPVDCIE 137 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|301060755|ref|ZP_07201570.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300445152|gb|EFK09102.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 254 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 Y+ E C C C CPVD G+N + I ++CI CG C CP Sbjct: 176 YIDPEKCKAC--MICARSCPVDAIVGGKNLIHVIDQEKCIKCGTCFEACP 223 Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 I P++C C +C CPVDAI Sbjct: 175 YYIDPEKCKACMICARSCPVDAI 197 >gi|237746743|ref|ZP_04577223.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes HOxBLS] gi|229378094|gb|EEO28185.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes HOxBLS] Length = 162 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG+CE CPVDAI Sbjct: 61 ERCIGCKL--CEAVCPAKAILIETGEREDGSRRTTRYEIDQSKCIFCGLCEEACPVDAI 117 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 + CI C +CE CP AI +T Sbjct: 61 ERCIGCKLCEAVCPAKAILIET 82 >gi|255281250|ref|ZP_05345805.1| putative dehydrogenase [Bryantella formatexigens DSM 14469] gi|255268207|gb|EET61412.1| putative dehydrogenase [Bryantella formatexigens DSM 14469] Length = 368 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 24/76 (31%), Gaps = 24/76 (31%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL----AIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C C+E C V+ ++ I CI CG CE CP Sbjct: 10 CAGC--MACIEKCKVNAITMVDDLYAYNAVIDEKACIGCGACERVCP------------- 54 Query: 65 LWLKINSEYATQWPNI 80 N A + P I Sbjct: 55 -----NVFLAEKKPPI 65 >gi|218706393|ref|YP_002413912.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UMN026] gi|218433490|emb|CAR14393.1| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli UMN026] Length = 639 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|331015678|gb|EGH95734.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 291 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCVAPCPVDCIEMHA 140 Query: 60 EP 61 P Sbjct: 141 LP 142 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|288930526|ref|YP_003434586.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288892774|gb|ADC64311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 251 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C+ C++ CV+VCPV ++ E+ L + + CI C C CP + + + E + Sbjct: 64 PCMHCENAPCVKVCPVGATWKREDGLVLVDFERCIGCRYCITACPYGVRQFNWQDADENF 123 Query: 67 LK 68 + Sbjct: 124 KQ 125 >gi|206895390|ref|YP_002246550.1| NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738007|gb|ACI17085.1| NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit [Coprothermobacter proteolyticus DSM 5265] Length = 596 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +V + C C C CPV+ E + I+ + CI CG C +CP AI Sbjct: 543 IVADKCKGCGL--CARNCPVNAISGELKQPHVINQEACIKCGTCFEKCPFGAI 593 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP + I D+C CG+C CPV+AI + + Sbjct: 530 CPAG-VCQALLSYTIVADKCKGCGLCARNCPVNAISGELKQPH 571 >gi|219850506|ref|YP_002464939.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219544765|gb|ACL26503.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aggregans DSM 9485] Length = 318 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V C+ C + C VCPV Y E+ + + ++CI C C CP A Sbjct: 149 FVPRPCMQCDNPPCTSVCPVSATYTNEHGVVAVDYEQCIGCRACIAACPYGA 200 >gi|20093521|ref|NP_613368.1| pyruvate:ferredoxin oxidoreductase, delta subunit [Methanopyrus kandleri AV19] gi|19886359|gb|AAM01298.1| Pyruvate:ferredoxin oxidoreductase, delta subunit [Methanopyrus kandleri AV19] Length = 89 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C+ C C CP C ++ I D C CG+CE CPV+AI+ E G Sbjct: 36 EKCMNCGL--CFMYCPDGCIRPSDDGYVIDYDYCKGCGICESVCPVNAIEMVLEEG 89 >gi|27380595|ref|NP_772124.1| ferredoxin [Bradyrhizobium japonicum USDA 110] gi|27353760|dbj|BAC50749.1| blr5484 [Bradyrhizobium japonicum USDA 110] Length = 656 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+++CP + +A++ D C CG C CP A P Sbjct: 271 CLDLCPTGAITPDGDHVAVNADVCAGCGQCAAACPTGAASYALPPADTQ 319 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V T C LC CV CP + D C+ CG+C+ CP I Sbjct: 500 VDTGGCTLCL--SCVSACPTGALRADPERPVLKFVEDACVQCGLCQSTCPEKVI 551 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 22 PVDCFY--EGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPGLELWLK 68 PVD EG AI D C C C CP A++ D E + +++ Sbjct: 483 PVDVIALPEGAPIGAITVDTGGCTLCLSCVSACPTGALRADPERPVLKFVE 533 >gi|326575679|gb|EGE25602.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis CO72] Length = 275 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 117 DCIGC--TKCIPACPVDAIVGTAKHMHSIITDLCTGCELCLAPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +CI C C P CPVDAI Sbjct: 113 IQEADCIGCTKCIPACPVDAI 133 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M ++T+ C C+ C+ CPVDC Sbjct: 140 MHSIITDLCTGCEL--CLAPCPVDCI 163 >gi|288932026|ref|YP_003436086.1| ferredoxin-dependent glutamate synthase [Ferroglobus placidus DSM 10642] gi|288894274|gb|ADC65811.1| ferredoxin-dependent glutamate synthase [Ferroglobus placidus DSM 10642] Length = 479 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 1 MTYVVT---ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK 56 M + ++ + CI C CV CP + E + + C+ CG C CP AI+ Sbjct: 1 MVFEISIDRDRCIKCL--RCVRYCPTEALGEEDKMPVVKKQTACVGCGNCVDVCPAYAIQ 58 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++I D CI C C CP +A+ + + Sbjct: 5 ISIDRDRCIKCLRCVRYCPTEALGEEDK 32 >gi|238788854|ref|ZP_04632645.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia frederiksenii ATCC 33641] gi|238723159|gb|EEQ14808.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia frederiksenii ATCC 33641] Length = 161 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 35 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 83 >gi|83409915|emb|CAI64336.1| heterodisulfide reductase like protein, subunit A [uncultured archaeon] Length = 1024 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 14/64 (21%) Query: 4 VVTENCILCKHTDCVEVCPVDCF------YEGENFLAI------HPDECIDCGVCEPECP 51 V E CI C C VCP E E + I +P C CG C ECP Sbjct: 942 VDPELCIGCG--RCTLVCPYKAPELKEVTVETEEIVYITKKSEINPAVCKGCGSCAAECP 999 Query: 52 VDAI 55 AI Sbjct: 1000 TGAI 1003 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 28/92 (30%) Query: 2 TYVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECI-- 41 TYV + C C+ CV CPV D + EG I + C+ Sbjct: 116 TYVDYDKCTACEL--CVSKCPVKVPDEYNEGQNNRKAIYLAFPQAVPRVFTIDAEHCLYL 173 Query: 42 ---DCGVCEPECPVDAIKPDTEPGLELWLKIN 70 CG C+ C DAI + + IN Sbjct: 174 TKGKCGNCQKACENDAINFEDTDKE---IDIN 202 Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 13/27 (48%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIK 56 N + P+ CI CG C CP A + Sbjct: 937 GNVSVVDPELCIGCGRCTLVCPYKAPE 963 >gi|257454853|ref|ZP_05620104.1| electron transport complex, rnfaBcdge type, b subunit [Enhydrobacter aerosaccus SK60] gi|257447786|gb|EEV22778.1| electron transport complex, rnfaBcdge type, b subunit [Enhydrobacter aerosaccus SK60] Length = 269 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 E+CI C T C+ CPVD G+ I D C C +C P CPVD I+ Sbjct: 114 EDCIGC--TKCIPACPVDAIIGSGKRMHTIFTDLCTGCELCLPPCPVDCIE 162 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I ++CI C C P CPVDAI Sbjct: 111 IREEDCIGCTKCIPACPVDAI 131 >gi|261340825|ref|ZP_05968683.1| dimethylsulfoxide reductase, chain B [Enterobacter cancerogenus ATCC 35316] gi|288317251|gb|EFC56189.1| dimethylsulfoxide reductase, chain B [Enterobacter cancerogenus ATCC 35316] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|325958243|ref|YP_004289709.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329675|gb|ADZ08737.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 143 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 5 VTENCILCKH--TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V +C+ C C+ VCP D E + + I D CI CG+C CP+ AI D Sbjct: 32 VPVHCLHCAKDRAPCMTVCPEDAIVEIDGAIVIMEDSCIGCGLCRDSCPIGAIHMDE 88 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECID--CGVCEPECPVDAIKPDTEP 61 ++CI C C + CP+ + E +A + CID C CP DA+K D+E Sbjct: 67 DSCIGCGL--CRDSCPIGAIHMDEYGIAKKCNLCIDKETPACVLTCPKDALKVDSED 121 >gi|295097939|emb|CBK87029.1| DMSO reductase, iron-sulfur subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|242238712|ref|YP_002986893.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] gi|242130769|gb|ACS85071.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech703] Length = 180 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIQCRHCEDAPCANVCPNGAIVRAGDHIKVQQEKCIGCKTCVVACPYGA 102 >gi|213854524|ref|ZP_03382764.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 327 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 107 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 162 >gi|154495354|ref|ZP_02034359.1| hypothetical protein PARMER_04411 [Parabacteroides merdae ATCC 43184] gi|154085278|gb|EDN84323.1| hypothetical protein PARMER_04411 [Parabacteroides merdae ATCC 43184] Length = 561 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++ E C C T C +CPV+ G+ + I P CI CG C C AI Sbjct: 507 FINPEKCKGC--TLCARMCPVNAIT-GDKKVPHVIDPQTCIRCGSCIERCKFGAIY 559 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P++C C +C CPV+AI D + Sbjct: 505 QYFINPEKCKGCTLCARMCPVNAITGDKKVPH 536 >gi|93005680|ref|YP_580117.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter cryohalolentis K5] gi|92393358|gb|ABE74633.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter cryohalolentis K5] Length = 280 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 123 DDCIGC--TKCIPACPVDAIVGTGKHMHTIFTDLCTGCELCIAPCPVDCI 170 Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I D+CI C C P CPVDAI Sbjct: 119 VIREDDCIGCTKCIPACPVDAI 140 >gi|327251648|gb|EGE63334.1| hypothetical protein ECSTEC7V_3499 [Escherichia coli STEC_7v] Length = 644 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|327311101|ref|YP_004337998.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoproteus uzoniensis 768-20] gi|326947580|gb|AEA12686.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoproteus uzoniensis 768-20] Length = 188 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV VCP Y+ ++ L I+ D CI C C CP DA Sbjct: 63 CQHCENPPCVTVCPTGASYKDKDGLVKINYDLCIGCRYCMVACPYDA 109 >gi|254037930|ref|ZP_04871988.1| aegA [Escherichia sp. 1_1_43] gi|226839554|gb|EEH71575.1| aegA [Escherichia sp. 1_1_43] Length = 644 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|224373083|ref|YP_002607455.1| iron-sulfur cluster-binding protein CooF [Nautilia profundicola AmH] gi|223589422|gb|ACM93158.1| iron-sulfur cluster-binding protein CooF [Nautilia profundicola AmH] Length = 172 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ CV CP+D N++ I+ D+CI C C CP AI Sbjct: 63 CMQCEDAPCVNACPIDIIKYENNYVKIYEDDCIGCRSCAMVCPFGAI 109 >gi|297620125|ref|YP_003708230.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297379102|gb|ADI37257.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 419 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAI-KP 57 Y++ E+ CI C C + C V+ N I+PD C+ CG+C ECPVDAI P Sbjct: 312 YIINEDKCIGC--RICSKACNVENAISISSETNMPYINPDYCVRCGLCHRECPVDAIDFP 369 Query: 58 DTEPGLEL 65 +T +L Sbjct: 370 ETSESEKL 377 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD-AIKPDTE 60 Y++ + C+ C C +CPV+ N I ++C+ C C CPV+ AIK E Sbjct: 121 YIIDDELCVKCD--SCRRICPVNAITYENNVYRIKSNDCVGCNRCATACPVENAIKSYNE 178 Query: 61 PGLELWLKINSE 72 L KIN Sbjct: 179 YELSE--KINRA 188 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 8 NCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDECIDCGVCEPECPVD-AIKP 57 C+ C C+EVCP G EN I+ D+CI C +C C V+ AI Sbjct: 280 ECVKCGL--CIEVCPTTAIRTGKVVKKTLNTENCYIINEDKCIGCRICSKACNVENAISI 337 Query: 58 DTEPGL 63 +E + Sbjct: 338 SSETNM 343 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 17/66 (25%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------------NFLAIHPDECIDCGVCEPECPV 52 +CI C +CVE CP +G N I + C+ C C CPV Sbjct: 83 SCIACG--NCVETCPTGVLEQGTLRKEAKQYIWTVPKINNYIIDDELCVKCDSCRRICPV 140 Query: 53 DAIKPD 58 +AI + Sbjct: 141 NAITYE 146 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYE------GENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 +NCI C C + CP + G+N P CI CG C CP ++ T Sbjct: 47 DNCISCNG--CYQSCPSEAIEMQYSEEYGKNLPVFFPGSCIACGNCVETCPTGVLEQGTL 104 Query: 60 EPGLELWL 67 + ++ Sbjct: 105 RKEAKQYI 112 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V+ CI C +CV+VCP N L EC+ CG+C CP AI+ Sbjct: 252 IVSSLCIKCN--NCVDVCPGKIDLNELNVL-----ECVKCGLCIEVCPTTAIR 297 >gi|125556583|gb|EAZ02189.1| hypothetical protein OsI_24281 [Oryza sativa Indica Group] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|189424747|ref|YP_001951924.1| cobyrinic acid ac-diamide synthase [Geobacter lovleyi SZ] gi|189421006|gb|ACD95404.1| Cobyrinic acid ac-diamide synthase [Geobacter lovleyi SZ] Length = 292 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-KPD 58 ++C C C++ C D + I P C CGVC CPV AI PD Sbjct: 71 QDCTGCG--ICMDSCRFDAIRREDISYRIDPVACEGCGVCYRLCPVKAIDFPD 121 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 25 CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 F G I +C CG+C C DAI+ + Sbjct: 59 AFMSGHE-AVIRQQDCTGCGICMDSCRFDAIRRED 92 >gi|317490387|ref|ZP_07948871.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|316910522|gb|EFV32147.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] Length = 176 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C + C VCP ++ E L +CI CG C CP A D Sbjct: 28 AYHVSISCNHCNNPVCTRVCPTGAMHKDELGLVWPDATKCIGCGYCTMACPYHAPHIDAR 87 >gi|310826466|ref|YP_003958823.1| NADH dehydrogenase (quinone) [Eubacterium limosum KIST612] gi|308738200|gb|ADO35860.1| NADH dehydrogenase (quinone) [Eubacterium limosum KIST612] Length = 599 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E C C C + CP D E + I +C+ CG C CP +AI Sbjct: 544 YVIDEEKCKGCG--ICAKKCPGDAITGEKKKPHVIDAAKCVKCGACIEACPFNAI 596 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I ++C CG+C +CP DAI + + Sbjct: 544 YVIDEEKCKGCGICAKKCPGDAITGEKKKPH 574 >gi|262375913|ref|ZP_06069144.1| electron transport complex protein [Acinetobacter lwoffii SH145] gi|262309007|gb|EEY90139.1| electron transport complex protein [Acinetobacter lwoffii SH145] Length = 263 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CI C T C+ CPVD G+ I D C C +C P CPVD I D + Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI--DLVEDQQP 145 Score = 40.9 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 PV + I DECI C C CPVDAI Sbjct: 73 PVQADGRPQRIKAVIREDECIGCTKCISACPVDAI 107 >gi|197119565|ref|YP_002139992.1| oxidoreductase iron-sulfur cluster-binding subunit [Geobacter bemidjiensis Bem] gi|197088925|gb|ACH40196.1| oxidoreductase, iron-sulfur cluster-binding subunit [Geobacter bemidjiensis Bem] Length = 260 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ E+ + + CI CG C CP Sbjct: 126 AFFVPKLCNQCDNPPCVQVCPVGATYQTEDGVVLVDRSWCIGCGYCIMGCPYG 178 >gi|157963673|ref|YP_001503707.1| dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] gi|157848673|gb|ABV89172.1| Dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] Length = 205 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + +C C C CP + E+ L IH D CI C C CP DA + D Sbjct: 59 AYYTSISCNHCNTPACTTACPTGAMHKRAEDGLVMIHDDICIGCSSCSQACPYDAPQLDE 118 >gi|317133525|ref|YP_004092839.1| NADH dehydrogenase (quinone) [Ethanoligenens harbinense YUAN-3] gi|315471504|gb|ADU28108.1| NADH dehydrogenase (quinone) [Ethanoligenens harbinense YUAN-3] Length = 624 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C C + C +CPV E + I +CI CG C CP AIK Sbjct: 574 EACKGC--SKCSRICPVGAISGEIRHPFTIDTQKCIKCGACIANCPFHAIKE 623 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 16/54 (29%), Gaps = 7/54 (12%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C C AI P+ C C C CPV AI + Sbjct: 552 HVRDKKCPTHTCKAMSI------YAIDPEACKGCSKCSRICPVGAISGEIRHPF 599 >gi|298507396|gb|ADI86119.1| iron-sulfur cluster-binding sigma-54-dependent transcriptional regulator, FehydlgC and FeS domain-containing [Geobacter sulfurreducens KN400] Length = 763 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 1 MTYVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++T E C C CV CPV + + I D CI CG C CP A Sbjct: 1 MEPIITDKEKCRKC--YCCVRSCPVKAIKVEKRYTEIIFDRCIGCGNCLSNCPQRA 54 >gi|331664458|ref|ZP_08365364.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA143] gi|331058389|gb|EGI30370.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA143] Length = 644 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|226327802|ref|ZP_03803320.1| hypothetical protein PROPEN_01679 [Proteus penneri ATCC 35198] gi|225203506|gb|EEG85860.1| hypothetical protein PROPEN_01679 [Proteus penneri ATCC 35198] Length = 247 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C CV VCPV F + + + + C+ C C CP DA Sbjct: 100 CNHCDEPPCVPVCPVQATFQRKDGIVVVDNERCVGCAYCVQACPYDA 146 >gi|188587083|ref|YP_001918628.1| glycyl-radical enzyme activating protein family [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351770|gb|ACB86040.1| glycyl-radical enzyme activating protein family [Natranaerobius thermophilus JW/NM-WN-LF] Length = 310 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C+ C C E+CP + + +N I+ ++C C +C+ CPV+AI+ Sbjct: 63 SCMDCGL--CQEICPENAIFTEQNSTQINQEKCKKCSICQESCPVNAIE 109 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Query: 11 LCKHTDCVEVCPVDCFY----EG---ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + T ++ CP+ C + EG E+ L IH + C+DCG+C+ CP +AI + Sbjct: 28 GIRTTVFIKGCPLRCEWCHNPEGLAFESQLLIHHNSCMDCGLCQEICPENAIFTEQNSTQ 87 >gi|158522074|ref|YP_001529944.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510900|gb|ABW67867.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 385 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 V+ E+ C C CVE CPVD G A+ ++ CI CG+C CP AI Sbjct: 316 VIDEDTCTGCG--ICVERCPVDAIVLGSEGTAVREEKYCIGCGICARFCPEGAI 367 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 12/60 (20%) Query: 9 CILCKHTDCVE--------VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C CK C + P+ I D C CG+C CPVDAI +E Sbjct: 287 CNCCKD--CCDTFTLWRNGATPM--INSTNYLSVIDEDTCTGCGICVERCPVDAIVLGSE 342 >gi|134045265|ref|YP_001096751.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662890|gb|ABO34536.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 132 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV CPV + F + + DECI C C CPV+AIK Sbjct: 80 EKCIDCG--ACVVHCPVGAISVDDEFKILLDEDECIGCKNCAKICPVNAIK 128 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 ++CIDCG C CPV AI D E Sbjct: 78 DDEKCIDCGACVVHCPVGAISVDDE 102 >gi|157369310|ref|YP_001477299.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia proteamaculans 568] gi|157321074|gb|ABV40171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Serratia proteamaculans 568] Length = 244 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV F + + + C+ C C CP +A I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQRQDGIVVVDNTRCVGCAYCVQACPYEARFINHETQTADK 158 >gi|332652331|ref|ZP_08418076.1| protein HymB [Ruminococcaceae bacterium D16] gi|332517477|gb|EGJ47080.1| protein HymB [Ruminococcaceae bacterium D16] Length = 626 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 E C C C++ CP+D I ++CI CG C CP AI+ + Sbjct: 576 ELCKGCG--KCMKQCPMDAISGQIRMPHVIDTEKCIKCGACWGCCPFGAIREE 626 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 14/55 (25%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + +VV ++C C + L I P+ C CG C +CP+DAI Sbjct: 553 LAHVVDKHCPHCNGR--------------KKELQIDPELCKGCGKCMKQCPMDAI 593 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 3/29 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYE 28 M +V+ TE CI C C CP E Sbjct: 599 MPHVIDTEKCIKCG--ACWGCCPFGAIRE 625 >gi|323978822|gb|EGB73903.1| glutamate synthase [Escherichia coli TW10509] Length = 641 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 57 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 113 >gi|265751809|ref|ZP_06087602.1| ferredoxin [Bacteroides sp. 3_1_33FAA] gi|263236601|gb|EEZ22071.1| ferredoxin [Bacteroides sp. 3_1_33FAA] Length = 309 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCP + N I P +C C CEPECP AI+ P + + Sbjct: 223 SCIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCEPECPKGAIQAINFPPRKPKV 280 Query: 68 K 68 + Sbjct: 281 E 281 Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVEVC D + + ++C CG C CP I+ Sbjct: 145 CLGCGD--CVEVCQFDAIHMNPETGLPEVDEEKCTACGACSKACPRKIIE 192 >gi|326201302|ref|ZP_08191174.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium papyrosolvens DSM 2782] gi|325988870|gb|EGD49694.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium papyrosolvens DSM 2782] Length = 623 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Query: 1 MTYVV--TENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 + Y+V E C C + C +CPV EG+ I+ +CI CG C CP AIK Sbjct: 565 LAYIVIEKEKCKGC--SKCARICPVQAI-EGKIKEPYTINQSKCIKCGACLEACPFAAIK 621 Query: 57 P 57 Sbjct: 622 E 622 >gi|238753089|ref|ZP_04614541.1| Hydrogenase-2 operon protein hybA [Yersinia rohdei ATCC 43380] gi|238708700|gb|EEQ00966.1| Hydrogenase-2 operon protein hybA [Yersinia rohdei ATCC 43380] Length = 346 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + PD C C C CP + K D + Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYDYD 170 >gi|224368549|ref|YP_002602712.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] gi|223691265|gb|ACN14548.1| iron-sulfur cluster-binding protein [Desulfobacterium autotrophicum HRM2] Length = 422 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 T C+ C+ C+ CPV +G++ + I+P C CG+C CP A I PD Sbjct: 73 TVLCLHCQEPLCIPACPVRAIEKGKDGIVRINPALCTGCGICALACPEAAPMITPD 128 >gi|188586494|ref|YP_001918039.1| Electron transfer flavoprotein alpha/beta-subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351181|gb|ACB85451.1| Electron transfer flavoprotein alpha/beta-subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 410 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++T+ C C CV+ CP + ++ ++ + C +CG C C AI + E Sbjct: 5 ILTDKCKGC--ALCVDACPFEAIEMKDDIAVLN-ESCTNCGACIESCKFGAIIKEEED 59 >gi|150401708|ref|YP_001325474.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014411|gb|ABR56862.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 138 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C+ C+ C+ +CP + + + DECI C +C CP A++ D Sbjct: 35 CMHCEDAPCLNICPEGAIKRINDKVVVISDECIGCELCVSACPFGAMRMDL 85 >gi|28871290|ref|NP_793909.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213970874|ref|ZP_03398997.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] gi|301383775|ref|ZP_07232193.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302059917|ref|ZP_07251458.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130516|ref|ZP_07256506.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854540|gb|AAO57604.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924397|gb|EEB57969.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tomato T1] Length = 291 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCVAPCPVDCIEMHA 140 Query: 60 EP 61 P Sbjct: 141 LP 142 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|127511541|ref|YP_001092738.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636836|gb|ABO22479.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 190 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 +C C++ CV VCP Y G++ L I D+C+ C C CP I P+T+ + Sbjct: 59 SCQQCENAPCVTVCPTGAAYVGDDGLVSIKEDKCVGCMYCVAACPYKVRFINPETKAADK 118 >gi|323966687|gb|EGB62119.1| glutamate synthase [Escherichia coli M863] Length = 639 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|284922835|emb|CBG35924.1| putative oxidoreductase [Escherichia coli 042] Length = 639 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|220910573|ref|YP_002485884.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7425] gi|219867184|gb|ACL47523.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7425] Length = 543 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M Y ++++C+ C C CP + +I P+ C +C G C CP+ Sbjct: 1 MAYKISDSCLACD--SCRPQCPTGAITVEDGRYSIDPETCNNCTGYFPEPQCVISCPISV 58 Query: 55 IKP 57 P Sbjct: 59 PSP 61 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 D C+ C C P+CP AI + Sbjct: 1 MAYKISDSCLACDSCRPQCPTGAITVED 28 >gi|77920299|ref|YP_358114.1| NADH dehydrogenase I subunit F [Pelobacter carbinolicus DSM 2380] gi|77546382|gb|ABA89944.1| NADH dehydrogenase subunit F [Pelobacter carbinolicus DSM 2380] Length = 488 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+ + C+ C T C ++CPV+C + + I +CI CG C+ +C +AI Sbjct: 433 FVILKDKCVGC--TLCAKICPVECISGQVKQPHVIDQSKCIKCGACQDKCKFEAI 485 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I D+C+ C +C CPV+ I Sbjct: 431 RQFVILKDKCVGCTLCAKICPVECI 455 >gi|39998452|ref|NP_954403.1| sigma-54 dependent transcriptional regulator, Fis family [Geobacter sulfurreducens PCA] gi|39985399|gb|AAR36753.1| sigma-54 dependent transcriptional regulator, Fis family [Geobacter sulfurreducens PCA] Length = 763 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 1 MTYVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++T E C C CV CPV + + I D CI CG C CP A Sbjct: 1 MEPIITDKEKCRKC--YCCVRSCPVKAIKVEKRYTEIIFDRCIGCGNCLSNCPQRA 54 >gi|308274447|emb|CBX31046.1| hypothetical protein N47_E45580 [uncultured Desulfobacterium sp.] Length = 1415 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 3/64 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 YV E C C CV CP E I C CGVC ECP AI+ + Sbjct: 1341 AYVEAEKCASCL--ICVRSCPYGVPKINAEGVSEIDVALCHGCGVCAAECPAKAIELNWY 1398 Query: 61 PGLE 64 + Sbjct: 1399 EDDQ 1402 >gi|296134443|ref|YP_003641690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296033021|gb|ADG83789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 190 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C + CP + + + I+ C+ C VC CP AI T P E Sbjct: 64 CRQCEDAPCAQACPTGAIRQEDGLVKINEQNCVGCKVCSMVCPFGAIVVTTVPNAEP 120 >gi|218701595|ref|YP_002409224.1| putative oxidoreductase [Escherichia coli IAI39] gi|218371581|emb|CAR19420.1| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli IAI39] Length = 639 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|213649211|ref|ZP_03379264.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 199 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|307155160|ref|YP_003890544.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Cyanothece sp. PCC 7822] gi|306985388|gb|ADN17269.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7822] Length = 75 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTETCEGV--ADCVKACPVACIHPGPGKNIKGTDWFWIDFATCIDCGICLSVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P + Sbjct: 59 EGAIIPEERPEYQK 72 >gi|219849153|ref|YP_002463586.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] gi|219543412|gb|ACL25150.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] Length = 477 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 9/88 (10%) Query: 5 VTENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V ++C C +CVE CP D + + C CG C CP DA++ Sbjct: 353 VLDSCRQCSVGAECVEACPEDAIERVDTGALRITNRCTGCGECVTACPYDAVQTVPRAKY 412 Query: 64 E---LWLKINSEYATQWPNITTKKESLP 88 + LW + +W L Sbjct: 413 QTGPLW-----DLFRRWQQRIRPTIPLA 435 >gi|121594763|ref|YP_986659.1| 4Fe-4S ferredoxin [Acidovorax sp. JS42] gi|222110623|ref|YP_002552887.1| 4fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidovorax ebreus TPSY] gi|120606843|gb|ABM42583.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidovorax sp. JS42] gi|221730067|gb|ACM32887.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidovorax ebreus TPSY] Length = 260 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + + + C+ CG C CP DA I +T+ + Sbjct: 116 CNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 174 >gi|62181096|ref|YP_217513.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128729|gb|AAX66432.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715583|gb|EFZ07154.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|319940782|ref|ZP_08015121.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sutterella wadsworthensis 3_1_45B] gi|319805664|gb|EFW02445.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sutterella wadsworthensis 3_1_45B] Length = 197 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 Y + C CK CV+VCP Y ++ + ++ ++CI C +C CP A Sbjct: 53 YFLPSICQCCKDAPCVKVCPTGATYRTDDGQILVNKEKCIGCKMCMAACPYGA 105 >gi|218779911|ref|YP_002431229.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761295|gb|ACL03761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 363 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI--KPD 58 V E C C C E C V ++ + + D CI CG+C CP +AI KP Sbjct: 271 AVVDAELCAACGD--CEERCQVLAITYDDDGIAVVDEDRCIGCGLCVTTCPTEAITLKPV 328 Query: 59 TEPGLE 64 +E + Sbjct: 329 SEDQWK 334 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 14/35 (40%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + + C CG CE C V AI D + Sbjct: 264 IVLTNHQAVVDAELCAACGDCEERCQVLAITYDDD 298 >gi|16765849|ref|NP_461464.1| anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167549449|ref|ZP_02343208.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991839|ref|ZP_02572938.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232098|ref|ZP_02657156.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238267|ref|ZP_02663325.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168261431|ref|ZP_02683404.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168821495|ref|ZP_02833495.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194472364|ref|ZP_03078348.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736835|ref|YP_002115591.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197262818|ref|ZP_03162892.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387777|ref|ZP_03214389.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224582934|ref|YP_002636732.1| anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912649|ref|ZP_04656486.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16421073|gb|AAL21423.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194458728|gb|EDX47567.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712337|gb|ACF91558.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197241073|gb|EDY23693.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288856|gb|EDY28229.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199604875|gb|EDZ03420.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325458|gb|EDZ13297.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329844|gb|EDZ16608.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333568|gb|EDZ20332.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205341968|gb|EDZ28732.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349653|gb|EDZ36284.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224467461|gb|ACN45291.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247725|emb|CBG25553.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994648|gb|ACY89533.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159078|emb|CBW18592.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913516|dbj|BAJ37490.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087025|emb|CBY96794.1| Formate dehydrogenase, iron-sulfur subunit Formate dehydrogenase subunit beta; FDH subunit beta [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222770|gb|EFX47841.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130857|gb|ADX18287.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989456|gb|AEF08439.1| putative anaerobic dimethylsulfoxide reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|86139798|ref|ZP_01058364.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] gi|85823427|gb|EAQ43636.1| iron-sulfur cluster-binding protein [Roseobacter sp. MED193] Length = 268 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEG 143 >gi|240102884|ref|YP_002959193.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] gi|239910438|gb|ACS33329.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] Length = 174 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 NC C C+ VCP Y E+ IH D+CI C C CP Sbjct: 47 NCKHCDDAPCLRVCPTHAIYRDEDGAVRIHEDKCIGCLACLQVCPYGVPFY 97 >gi|320162471|ref|YP_004175696.1| ferredoxin [Anaerolinea thermophila UNI-1] gi|319996325|dbj|BAJ65096.1| ferredoxin [Anaerolinea thermophila UNI-1] Length = 57 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 MT+V++ ++CI C C CP Y + + +C DCG C CP AI P Sbjct: 1 MTHVISKDDCIQCG--ACETECPEGAIYMDGEYYVVDEAKCKDCGSCVDVCPTGAIGP 56 Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 15/27 (55%), Positives = 16/27 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I D+CI CG CE ECP AI D E Sbjct: 4 VISKDDCIQCGACETECPEGAIYMDGE 30 >gi|291086291|ref|ZP_06355299.2| electron transport protein HydN [Citrobacter youngae ATCC 29220] gi|291068768|gb|EFE06877.1| electron transport protein HydN [Citrobacter youngae ATCC 29220] Length = 195 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 72 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 124 >gi|289192303|ref|YP_003458244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938753|gb|ADC69508.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 391 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVTE C+ C CV CPV + I +CI C +C CP +AI Sbjct: 134 VVTEACVGCG--ICVPECPVSAITLEDGKAVIDKSKCIYCSICAQTCPWNAIF 184 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C CVEVCP + + EN + I P C C +C CPV+A++ + + Sbjct: 202 VNAEKCIYCL--KCVEVCPGNMIKVDKENMIVIPPKSCPACKLCVNTCPVNALELEVK 257 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + E+ + CI CG C CP A+K Sbjct: 280 KKCASVCPTEAIVVDEDKKEV--RMCIVCGACTVACPTGALK 319 >gi|282864084|ref|ZP_06273141.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] gi|282561162|gb|EFB66707.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Streptomyces sp. ACTE] Length = 302 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C C H C++VCP + E + + D C CGVC P CP I+ Sbjct: 115 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGVCVPACPYGVIEQ 167 >gi|217971445|ref|YP_002356196.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|217496580|gb|ACK44773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] Length = 553 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALHSYLNKVVSRF 257 Query: 71 SEYATQWPNI 80 E+A P I Sbjct: 258 REHAQTAPVI 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C +C CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|326561676|gb|EGE12013.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis 103P14B1] Length = 275 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 117 DCIGC--TKCIPACPVDAIVGTAKHMHSIITDLCTGCELCLAPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +CI C C P CPVDAI Sbjct: 113 IQEADCIGCTKCIPACPVDAI 133 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M ++T+ C C+ C+ CPVDC Sbjct: 140 MHSIITDLCTGCEL--CLAPCPVDCI 163 >gi|302339991|ref|YP_003805197.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301637176|gb|ADK82603.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 292 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKP 57 CI CK C+ CPVD F + + +H D CI C C CP AI+ Sbjct: 216 CIKCK--KCISACPVDMFTYADGEIVMHRDNSSCILCAECFHTCPAGAIEH 264 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 10/19 (52%) Query: 35 IHPDECIDCGVCEPECPVD 53 I +CI C C CPVD Sbjct: 211 IDAAKCIKCKKCISACPVD 229 >gi|300871807|ref|YP_003786680.1| ferredoxin, 4Fe-4S [Brachyspira pilosicoli 95/1000] gi|300689508|gb|ADK32179.1| ferredoxin, 4Fe-4S [Brachyspira pilosicoli 95/1000] Length = 55 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M V+ +C+ C C+ C D EG + I PD+C DCG CE CP +AI Sbjct: 1 MPRVINNDCVACG--SCLPECAFDAISEG-DIYKIDPDKCTDCGACEAVCPSNAIHQ 54 >gi|255658499|ref|ZP_05403908.1| formate dehydrogenase-O, iron-sulfur subunit [Mitsuokella multacida DSM 20544] gi|260849298|gb|EEX69305.1| formate dehydrogenase-O, iron-sulfur subunit [Mitsuokella multacida DSM 20544] Length = 270 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C+ C C + CP + + I+ ++C+ CG C CP D K Sbjct: 72 FVKTQCMHCGDPACAKGCPEEAIDKLASGAVVINEEKCVGCGYCVANCPFDVPK 125 >gi|204929695|ref|ZP_03220769.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321414|gb|EDZ06614.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|198244744|ref|YP_002216593.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353628|ref|YP_002227429.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857937|ref|YP_002244588.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197939260|gb|ACH76593.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273409|emb|CAR38384.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709740|emb|CAR34092.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326624349|gb|EGE30694.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628728|gb|EGE35071.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 209 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 130 Query: 60 EPGL 63 + G Sbjct: 131 QTGQ 134 >gi|150005462|ref|YP_001300206.1| F420H2:quinone oxidoreductase [Bacteroides vulgatus ATCC 8482] gi|149933886|gb|ABR40584.1| F420H2:quinone oxidoreductase [Bacteroides vulgatus ATCC 8482] Length = 427 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLA--IHPDECIDCGVCEPECP 51 ++C C + CV+ CP C + E FL + +CIDCG+CE CP Sbjct: 8 QSCCGC--SSCVQKCPRQCISLHEDTEGFLYPVVDKGDCIDCGLCEKVCP 55 >gi|28209953|ref|NP_780897.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] gi|28202388|gb|AAO34834.1| periplasmic [Fe] hydrogenase 1 [Clostridium tetani E88] Length = 448 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C + CPV+ + N + I+ + C+DCG+C CP +I E Sbjct: 85 CAKDGDIICEKSCPVNAIFRDPNDNNIYINDELCLDCGLCVRNCPSGSILDKKE 138 >gi|320450082|ref|YP_004202178.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermus scotoductus SA-01] gi|320150251|gb|ADW21629.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermus scotoductus SA-01] Length = 258 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C H CV CP E + + CI C C CP +A+ D Sbjct: 77 SCMHCTHAPCVASCPTGAMAHREGGVVTVDEKTCIGCRSCVQACPYEAVHFDE 129 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 20/84 (23%) Query: 1 MTY----VVTEN---CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------G 44 M + VVT + CI C CV+ CP + + E +H +C C Sbjct: 95 MAHREGGVVTVDEKTCIGC--RSCVQACPYEAVHFDEARGVVH--KCTMCYDRISNGDQP 150 Query: 45 VCEPECPVDAIKPDTEPGLELWLK 68 C CP DA+ T + + Sbjct: 151 ACVKACPTDALTFGTYQEIRAMAE 174 >gi|319955037|ref|YP_004166304.1| 4fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulophaga algicola DSM 14237] gi|319423697|gb|ADV50806.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Cellulophaga algicola DSM 14237] Length = 378 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 C C + CVEVCPV + E + + I D C+ C C CP D Sbjct: 234 CFHCDNPPCVEVCPVQATWKEEDGLVVIDYDWCVGCRYCMAACPYD 279 >gi|302336898|ref|YP_003802104.1| NADH dehydrogenase (quinone) [Spirochaeta smaragdinae DSM 11293] gi|301634083|gb|ADK79510.1| NADH dehydrogenase (quinone) [Spirochaeta smaragdinae DSM 11293] Length = 632 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 +V+ E+ C C T C + CPV GE I + CI CG C C AI+ Sbjct: 574 FVIDESLCKGC--TACAKACPVGAIS-GEKKAPHTIDTERCIRCGACMATCRFGAIR 627 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 1/48 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CPV +F I C C C CPV AI + + + + Sbjct: 563 CPVGACKALSDF-VIDESLCKGCTACAKACPVGAISGEKKAPHTIDTE 609 >gi|295107352|emb|CBL04895.1| Uncharacterized conserved protein [Gordonibacter pamelaeae 7-10-1-b] Length = 208 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 + V++ C C C CP C + I C+ CG C CP DAI P Sbjct: 154 FTVSDACTGCG--ACFAACPQGCIAPRPDGRAFIEQQACLHCGRCREVCPSDAIAP 207 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 2/31 (6%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 D C CG C CP I P P +++ Sbjct: 158 DACTGCGACFAACPQGCIAP--RPDGRAFIE 186 >gi|289207331|ref|YP_003459397.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288942962|gb|ADC70661.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 231 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + +C+ C++ DCV VCP + E+ + + D+C+ C C CP A + D E G Sbjct: 68 IPMSCMHCQYADCVNVCPTGASYKRPEDGIVLVDQDKCMGCNYCAWACPYGARELDREDG 127 Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 8/19 (42%) Query: 32 FLAIHPDECIDCGVCEPEC 50 L I D C+ C C C Sbjct: 4 GLVIDMDTCVGCHACAVAC 22 >gi|78044780|ref|YP_361471.1| putative sulfite reductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996895|gb|ABB15794.1| putative sulfite reductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 302 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + ENC C C ++CPV+ + +++ + CI CG C CP +A Sbjct: 173 IKENCTACGL--CTKICPVNAITLNQQEISVDYEVCIGCGDCVKACPFEA 220 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 8/46 (17%) Query: 18 VEVCPVDCFYEGENFLAI--------HPDECIDCGVCEPECPVDAI 55 + C +C EN L I + C CG+C CPV+AI Sbjct: 147 ITGCANNCLKAEENDLGIKGVCRPNWIKENCTACGLCTKICPVNAI 192 >gi|291086580|ref|ZP_06356206.2| hydrogenase-2 operon protein HybA [Citrobacter youngae ATCC 29220] gi|291067843|gb|EFE05952.1| hydrogenase-2 operon protein HybA [Citrobacter youngae ATCC 29220] Length = 289 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 69 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 124 >gi|167770144|ref|ZP_02442197.1| hypothetical protein ANACOL_01487 [Anaerotruncus colihominis DSM 17241] gi|167667466|gb|EDS11596.1| hypothetical protein ANACOL_01487 [Anaerotruncus colihominis DSM 17241] Length = 564 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV +N I P+ECI CG C CP +A Sbjct: 11 NCKNC--HKCIRSCPVKSIRFSDNQAKIIPEECILCGRCVVVCPQNA 55 >gi|254491482|ref|ZP_05104661.1| 4Fe-4S binding domain protein [Methylophaga thiooxidans DMS010] gi|224462960|gb|EEF79230.1| 4Fe-4S binding domain protein [Methylophaga thiooxydans DMS010] Length = 517 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 + C LC CV VCPV +G + ++ D C+ CG+C+ CP DAI Sbjct: 393 QACTLC--MSCVSVCPVGAVVDGVDKPQLNFIEDLCVQCGICDTACPEDAI 441 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 15 TDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK---PDTEPGLELWLKIN 70 T+C++ CP G + + ++P C CG C CP AI P + + + ++ Sbjct: 161 TNCIDACPAGAVESSGWDLINVNPSLCQGCGSCTVVCPSGAISYALPTLDISINRFREML 220 Query: 71 SEYATQ 76 Y Q Sbjct: 221 QSYFEQ 226 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 14/36 (38%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + + C C C CPV A+ + +++ Sbjct: 388 IEVDKQACTLCMSCVSVCPVGAVVDGVDKPQLNFIE 423 >gi|254173765|ref|ZP_04880437.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermococcus sp. AM4] gi|214032457|gb|EEB73287.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermococcus sp. AM4] Length = 635 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V+ + C CK + CP + N + I C CGVC CP DAIK +E Sbjct: 574 VIEDRCTGCKACILLTGCPALVYDPETNKVRIDGLLCTGCGVCNQTCPFDAIKFPSELE 632 >gi|154248925|ref|YP_001409750.1| NADH dehydrogenase (quinone) [Fervidobacterium nodosum Rt17-B1] gi|154152861|gb|ABS60093.1| NADH dehydrogenase (quinone) [Fervidobacterium nodosum Rt17-B1] Length = 632 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C C + C CP + E I D+CI CG+C +C AI+ Sbjct: 578 IIPEKCKSC--SLCARSCPNNAISGERGKPYVIDQDKCIKCGLCVTKCKFGAIE 629 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I P++C C +C CP +AI + Sbjct: 565 CPSG-MCTAFKKYIIIPEKCKSCSLCARSCPNNAISGE 601 >gi|326573425|gb|EGE23393.1| RnfABCDGE type electron transport complex subunit B [Moraxella catarrhalis 101P30B1] Length = 275 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 117 DCIGC--TKCIPACPVDAIVGTAKHMHSIITDLCTGCELCLAPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +CI C C P CPVDAI Sbjct: 113 IQEADCIGCTKCIPACPVDAI 133 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M ++T+ C C+ C+ CPVDC Sbjct: 140 MHSIITDLCTGCEL--CLAPCPVDCI 163 >gi|238755284|ref|ZP_04616628.1| Electron transport protein hydN [Yersinia ruckeri ATCC 29473] gi|238706518|gb|EEP98891.1| Electron transport protein hydN [Yersinia ruckeri ATCC 29473] Length = 181 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP ++ + + + CI C C CP A++ T+P Sbjct: 58 CRQCEDAPCANVCPNGAIARIDDHIQVMQERCIGCKTCVVACPYGAMEVVTKPIFRQ 114 >gi|298528790|ref|ZP_07016194.1| protein of unknown function DUF362 [Desulfonatronospira thiodismutans ASO3-1] gi|298512442|gb|EFI36344.1| protein of unknown function DUF362 [Desulfonatronospira thiodismutans ASO3-1] Length = 374 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV+ CI C C CPV + + D+CI+C C+ CP DAI+ Sbjct: 308 VVSSRCISCG--ICAGHCPVGAMSMSSSGPVLDRDKCINCYCCQEMCPEDAIR 358 >gi|291288074|ref|YP_003504890.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885234|gb|ADD68934.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 204 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + V+ C C C+ +CP + + E + + ++CI C C+ CP A D Sbjct: 61 AFYVSMACNQCDDPACLNICPANAYTKRESDGIVVYDAEKCISCFGCQQVCPYTAPVYDY 120 Query: 60 EPGL 63 E G Sbjct: 121 EAGH 124 >gi|224582445|ref|YP_002636243.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466972|gb|ACN44802.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 179 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 50 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 103 >gi|92118585|ref|YP_578314.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrobacter hamburgensis X14] gi|91801479|gb|ABE63854.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrobacter hamburgensis X14] Length = 674 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C C+++CP + +AI+ + C CG C CP A P Sbjct: 282 VGC--HRCLDLCPTSAITPDGDHVAINAEICAGCGQCAAACPTGAASYALPPAD 333 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 5/101 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV CP Y+ + D C+ CG+C+ CP IK + Sbjct: 516 VDVEGCTLCL--SCVSACPTGALYDDPERPVLRFTEDACVQCGLCQATCPEKVIKLVPQI 573 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKM-DGVKQKYE 101 + P + + D V K E Sbjct: 574 DFRAATAPARTLKEEEPALCVRCHKPFGVKSTIDRVAAKLE 614 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 18 VEVCPVDCFY--EGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 V PVD +G F L + + C C C CP A+ D E + + + Sbjct: 495 VAPAPVDVIALPDGAPFGTLEVDVEGCTLCLSCVSACPTGALYDDPERPVLRFTE 549 >gi|150018760|ref|YP_001311014.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] gi|149905225|gb|ABR36058.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] Length = 271 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 V C+ C C VCP EN +AIHPD CI CG C CP +I Sbjct: 6 VNQSTCVKCGL--CSNVCPSGVLSMNENGPIAIHPDNCISCGHCVAICPSSSI 56 >gi|330829846|ref|YP_004392798.1| hydrogenase 2 protein [Aeromonas veronii B565] gi|328804982|gb|AEB50181.1| Hydrogenase 2 protein [Aeromonas veronii B565] Length = 348 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + P C C C CP D K D + Sbjct: 109 IKKQCMHCVDPNCVSVCPVQALKKDPKTGIVHYDPSVCTGCRYCMVGCPFDVPKYDYDNP 168 Query: 63 L 63 L Sbjct: 169 L 169 >gi|289830114|ref|ZP_06547545.1| putative dimethyl sulfoxide reductase subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 131 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 10 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 66 >gi|224584620|ref|YP_002638418.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469147|gb|ACN46977.1| electron transport protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|323131194|gb|ADX18624.1| electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 195 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 72 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 124 >gi|239908169|ref|YP_002954910.1| iron-sulphur binding protein [Desulfovibrio magneticus RS-1] gi|239798035|dbj|BAH77024.1| iron-sulphur binding protein [Desulfovibrio magneticus RS-1] Length = 210 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C C E CP I+ C+ CG C CP AI Sbjct: 88 VDPEACHGCG--ACAEACPDAAIQITAGKAVINQGTCLGCGACARVCPSRAI 137 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 8/47 (17%) Query: 18 VEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 V CP C ++ P+ C CG C CP AI+ Sbjct: 63 VSACPNACVRPQVADLGLIAVREASVDPEACHGCGACAEACPDAAIQ 109 >gi|206889393|ref|YP_002247876.1| indolepyruvate oxidoreductase subunit IorA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741331|gb|ACI20388.1| indolepyruvate oxidoreductase subunit IorA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 596 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 22/53 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV E C CK CP F E + I C+ CG C CP AI+ Sbjct: 542 VVKELCKGCKLCLTEFECPAIVFKEEDVKAEIDHTICVGCGCCVHICPTKAIR 594 >gi|119720719|ref|YP_921214.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermofilum pendens Hrk 5] gi|119525839|gb|ABL79211.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermofilum pendens Hrk 5] Length = 131 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C++ C VCP + E + ++P +C+ CG C CP+ A++ D E Sbjct: 53 CRACENPPCAAVCPTNALVRREGGGVVLNPSKCVGCGNCARACPIGAVQWDYE 105 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C +C CP+ ++ ++ P C+ CG C CP Sbjct: 85 CVGCG--NCARACPIGAVQ--WDYESMKPIICVHCGYCVNYCPYG 125 >gi|328947025|ref|YP_004364362.1| Ferredoxin hydrogenase [Treponema succinifaciens DSM 2489] gi|328447349|gb|AEB13065.1| Ferredoxin hydrogenase [Treponema succinifaciens DSM 2489] Length = 492 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+VT C C C+ CP + I CI+CG C CP +I Sbjct: 112 YMVTNACQGCYARPCMVNCPRKAITV-DRRATIDEKLCINCGKCMENCPYHSI 163 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 15/61 (24%) Query: 9 CILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVD 53 CI C C E CPV + E I +CI CG C ECP Sbjct: 148 CINCGKCMENCPYHSIIKIPVPCEEACPVGAISKDEKGHEKIDYHKCIFCGNCMRECPFG 207 Query: 54 A 54 A Sbjct: 208 A 208 >gi|242278357|ref|YP_002990486.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242121251|gb|ACS78947.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 266 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V E+C+ C C E+CP + E+ I +CI C C +CP A P + Sbjct: 191 VDESCVQCGL--CAEICPTGAI-DAEDSSVIDTVKCITCCACLKKCPNQARAMKDGPVKD 247 Query: 65 LWLKINSEYAT 75 +++N +A Sbjct: 248 ARVRLNRLFAE 258 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 16 DCVEVCPVDCFYEGE------NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CV P + Y G +F+A+ + C+ CG+C CP AI + Sbjct: 166 SCVNNIPGEYPYRGSTELWDVDFIAVD-ESCVQCGLCAEICPTGAIDAED 214 >gi|298373293|ref|ZP_06983282.1| Fe-hydrogenase large subunit family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274345|gb|EFI15897.1| Fe-hydrogenase large subunit family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 491 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y +T C C C CP + + +N I D CI CG+C CP AI Sbjct: 114 YEITNLCKGCVARGCYTNCPKNAVHFQKNGQAQIDHDACISCGICHQSCPYHAIVY 169 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECP 51 + CI C C E CPV + E I +CI CG C CP Sbjct: 150 DACISCGICHQSCPYHAIVYIPVPCEESCPVKAISKDEFGIEHIDESKCIYCGKCINACP 209 Query: 52 VDAIKP 57 AI Sbjct: 210 FGAIFE 215 >gi|281179727|dbj|BAI56057.1| formate hydrogenlyase subunit [Escherichia coli SE15] Length = 203 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVHLNESLCVSCKLCGIACPFGAIEF 99 >gi|289191701|ref|YP_003457642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938151|gb|ADC68906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 389 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVTE C+ C CV CPV + I +CI C +C CP +AI Sbjct: 135 VVTEACVGCG--ICVPECPVSAITLEDGKAVIDKSKCIYCSICAQTCPWNAIF 185 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C CVEVCP + + EN + I P C C +C CPV+A++ + + Sbjct: 203 VNAEKCIYCL--KCVEVCPGNMIKVDKENMIVIPPKSCPACKLCVNTCPVNALELEVK 258 Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + E+ + CI CG C CP A+K Sbjct: 281 KKCASVCPTEAIVVDEDKKEV--RMCIVCGACTVACPTGALK 320 >gi|238759103|ref|ZP_04620272.1| Hydrogenase-2 operon protein hybA [Yersinia aldovae ATCC 35236] gi|238702651|gb|EEP95199.1| Hydrogenase-2 operon protein hybA [Yersinia aldovae ATCC 35236] Length = 329 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP + K D Sbjct: 100 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPDVCTGCRYCMVGCPFNVPKYD 155 >gi|238059197|ref|ZP_04603906.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] gi|237881008|gb|EEP69836.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Micromonospora sp. ATCC 39149] Length = 294 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 114 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCIPACPYGVI 164 >gi|237731324|ref|ZP_04561805.1| tetrathionate reductase subunit B [Citrobacter sp. 30_2] gi|226906863|gb|EEH92781.1| tetrathionate reductase subunit B [Citrobacter sp. 30_2] Length = 249 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 105 CNHCDNPPCVPVCPVQATFQREDGIVVVDNTRCVGCAYCVQACPYDARFINHETQTADK 163 >gi|157163871|ref|YP_001467642.1| ubiquinol cytochrome c oxidoreductase, cytochrome b subunit [Campylobacter concisus 13826] gi|157101373|gb|ABV23503.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter concisus 13826] Length = 183 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +T +C C C++VCPV + + EN + +H D+CI CG C CP +I Sbjct: 54 FITHSCHHCDEPACMDVCPVGAYIKLENGVVQPLH-DKCIGCGYCLMACPYGSI 106 >gi|14520613|ref|NP_126088.1| electron transport protein [Pyrococcus abyssi GE5] gi|5457829|emb|CAB49319.1| Electron transport protein, containing 4Fe-4S binding domain [Pyrococcus abyssi GE5] Length = 166 Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C+E CP L + +EC CG C CP A+K Sbjct: 53 CRQCDPAPCMEACPTGAIKRENGVLVVSAEECTGCGECVRACPFGAVK 100 >gi|260655742|ref|ZP_05861211.1| conserved domain protein [Jonquetella anthropi E3_33 E1] gi|260629358|gb|EEX47552.1| conserved domain protein [Jonquetella anthropi E3_33 E1] Length = 56 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M VV + C+ C+ CV CPV+ ++ ++P+ C++CG C CP +AI Sbjct: 1 MAAVVNKDMCVGCE--TCVGTCPVEAISMADDKAVVNPEVCVECGACVSACPSEAI 54 >gi|284006931|emb|CBA72203.1| electron transport protein [Arsenophonus nasoniae] Length = 181 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP +F+ +H CI C C CP A++ + P Sbjct: 58 CRQCEDAPCANVCPNGAITRESDFVHVHQARCIGCKTCVVACPYGAMEVVSRP 110 >gi|254500510|ref|ZP_05112661.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222436581|gb|EEE43260.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 245 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 78 SCLHCDDAPCVTVCPTGASYKRREDGIVLVNEDACIGCGLCAWACPYGARELDQAEG 134 >gi|77919712|ref|YP_357527.1| indolepyruvate oxidoreductase subunit alpha [Pelobacter carbinolicus DSM 2380] gi|77545795|gb|ABA89357.1| indolepyruvate oxidoreductase, alpha subunit [Pelobacter carbinolicus DSM 2380] Length = 613 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 MT V C C++ CP + E + I D C+ CGVCE CP AI Sbjct: 554 MT--VGAECNGCRYCIKAFECPALVYDEPSGRVCIDNDLCVGCGVCERVCPRGAIH 607 >gi|294636444|ref|ZP_06714823.1| formate-dependent nitrite reductase, NrfC protein [Edwardsiella tarda ATCC 23685] gi|291090296|gb|EFE22857.1| formate-dependent nitrite reductase, NrfC protein [Edwardsiella tarda ATCC 23685] Length = 255 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ C+ VCPV Y+ E+ + + C+ C C CP DA Sbjct: 109 CNHCEAPPCIPVCPVQATYQREDGIVMVDNTRCVGCAYCVQACPYDA 155 >gi|289191613|ref|YP_003457554.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938063|gb|ADC68818.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 151 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C++ C E+CPVD Y E + + CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKEGIPIVDKERCIACGMCAIACPIGAIF 89 >gi|256824301|ref|YP_003148261.1| formate dehydrogenase subunit beta [Kytococcus sedentarius DSM 20547] gi|256687694|gb|ACV05496.1| formate dehydrogenase beta subunit [Kytococcus sedentarius DSM 20547] Length = 391 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++ C C H C++VCP + E + + D C CG C CP I+ T+ Sbjct: 196 SDVCKHCTHAGCLDVCPTGALFRSEFGTVVVQADICNGCGYCVGACPFGVIERRTDA 252 >gi|254436213|ref|ZP_05049720.1| hypothetical protein NOC27_3276 [Nitrosococcus oceani AFC27] gi|207089324|gb|EDZ66596.1| hypothetical protein NOC27_3276 [Nitrosococcus oceani AFC27] Length = 52 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%) Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 + +L IN+E A WP IT KE A + D +K Sbjct: 1 MPKEHQKYLGINAELAKSWPVITESKEPPADADQWDRIKN 40 >gi|54298873|ref|YP_125242.1| hypothetical protein lpp2940 [Legionella pneumophila str. Paris] gi|53752658|emb|CAH14093.1| hypothetical protein lpp2940 [Legionella pneumophila str. Paris] Length = 204 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C T C++ CPVD + I EC CG+C CPVD I+ + P Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIIAHECTGCGLCVDPCPVDCIEMVSLPAA 137 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 79 IKEDECIGCTKCIKACPVDAI 99 >gi|238787390|ref|ZP_04631189.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Yersinia frederiksenii ATCC 33641] gi|238724652|gb|EEQ16293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Yersinia frederiksenii ATCC 33641] Length = 182 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ +C C C++VCP + + + + + + D+CI C +C CP +A D + G Sbjct: 52 FISMSCNHCDDPQCMKVCPANTYSKRPDGIVVQDHDKCIGCRMCIMACPYNAPVFDPQEG 111 >gi|300088267|ref|YP_003758789.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528000|gb|ADJ26468.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 87 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +TE CI C C CP + EGE I P C +C C CPVD Sbjct: 1 MAFKITEECISCG--ACEPECPNNAITEGETIYVIDPTRCTECVGAFSTKQCADICPVDC 58 Query: 55 IKPDT 59 PD Sbjct: 59 CVPDD 63 >gi|296108767|ref|YP_003615716.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295433581|gb|ADG12752.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 150 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C+ C+E+CPVD Y E ++ ++CI C +C CP+ AI Sbjct: 42 CMQCEKAPCMEICPVDAIYLEEGIPIVNKEKCIGCAMCVIACPIGAIF 89 >gi|11465802|ref|NP_053946.1| hypothetical protein PopuCp151 [Porphyra purpurea] gi|1723405|sp|P51336|YCXI_PORPU RecName: Full=Uncharacterized protein in rpl9-rpl11 intergenic region; AltName: Full=ORF75 gi|1276802|gb|AAC08222.1| ORF75 [Porphyra purpurea] Length = 75 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-------ECIDCGVCEPECPV 52 M++ +VTE CI +CV CPV C ++GE I+ D CIDC +C CP Sbjct: 1 MSHTIVTEKCIGV--AECVNACPVSCIHKGEGKNTINKDWYWIDFAACIDCSICIQVCPT 58 Query: 53 -DAIKPDTEPGLE 64 AI EP L+ Sbjct: 59 KGAILDKEEPSLQ 71 >gi|295111540|emb|CBL28290.1| electron transport complex, RnfABCDGE type, B subunit [Synergistetes bacterium SGP1] Length = 277 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C VCP + I P +C +CG+C +CP I+ Sbjct: 220 CIGCGL--CARVCPAGAITMDRDLAVIDPAKCTNCGLCAQKCPAKCIE 265 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 CI C +VC D + G + L + ++C+ CG C CP Sbjct: 145 CIG--FGTCTKVCNFDAIFMGPDGLPVVDREQCVGCGACVSACP 186 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 18/70 (25%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCEPEC 50 E C+ C CV CP D +G + CI CG+C C Sbjct: 173 EQCVGCG--ACVSACPKDVLTLIPQTSDVVVACGSHWKGPAVRRVCSIGCIGCGLCARVC 230 Query: 51 PVDAIKPDTE 60 P AI D + Sbjct: 231 PAGAITMDRD 240 >gi|161503359|ref|YP_001570471.1| hypothetical protein SARI_01432 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864706|gb|ABX21329.1| hypothetical protein SARI_01432 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 205 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYSAPQY 116 >gi|54309722|ref|YP_130742.1| electron transport complex protein RnfB [Photobacterium profundum SS9] gi|46914160|emb|CAG20940.1| Putative RnfB-related protein [Photobacterium profundum SS9] Length = 192 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIEMIPV 163 Query: 58 -DTEPGLEL 65 DT + Sbjct: 164 KDTPESWKW 172 >gi|188997094|ref|YP_001931345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932161|gb|ACD66791.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 211 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + V C C++ C +CPV + N + + + CI C C CP +AI D Sbjct: 51 HFVPLRCNHCENAPCERICPVSALHYLPNGIVNVDHNRCIGCASCMMACPYNAIYID 107 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 31/120 (25%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPVDA 54 CI C C+ CP + I P D+C C C CP A Sbjct: 89 CIGC--ASCMMACPYNAI-------YIDPITNSADKCTYCAHRIEVGMMPACVVACPTHA 139 Query: 55 -IKPDTEPGLELWLKINSEYATQWPNITTKKESL---PSAAKMDGVKQKYEKYFSPNPGG 110 I D + +I S+Y + ++ +K L P + G + S P G Sbjct: 140 NIFGDLDDPES---EI-SKYLKEHRDVMVRKPELNTKPKHFYVRGSTVALDPLASERPEG 195 >gi|147920357|ref|YP_685870.1| 2(4Fe-4S) ferredoxin-domain-containing protein [uncultured methanogenic archaeon RC-I] gi|110621266|emb|CAJ36544.1| 2(4Fe-4S) ferredoxin-domain protein [uncultured methanogenic archaeon RC-I] Length = 130 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV VCPVD YE + + I C+ CG C CP AI+ Sbjct: 79 CVHCG--ACVSVCPVDAISYEHDWQVTIDKAACVQCGTCTHACPTSAIR 125 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ++C+ CG C CPVDAI + + Sbjct: 69 GEAIVKDDNQCVHCGACVSVCPVDAISYEHD 99 >gi|148265410|ref|YP_001232116.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146398910|gb|ABQ27543.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 281 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + + CI C C CP K + Sbjct: 82 EMCMHCNEPACASVCPVGAFKKTKEGPVVYDAKRCIGCRFCMVACPFGVPKYE 134 >gi|330877327|gb|EGH11476.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 291 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCVAPCPVDCIEMHA 140 Query: 60 EP 61 P Sbjct: 141 LP 142 Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|323196185|gb|EFZ81343.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] Length = 117 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|261402831|ref|YP_003247055.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261369824|gb|ACX72573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 391 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVT++C+ C CV CPV + I +C+ C +C CP +AI Sbjct: 134 VVTDDCVGCGV--CVPECPVGAITLEDGKAVIDKSKCVYCSICAQTCPWNAIF 184 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 14/63 (22%) Query: 9 CILCKHTDCVEVCPVDCF-----YEGENFLAIHP-------DECIDCGVCEPECPVDAIK 56 C+LC C++VCP++ + P D+C+ CGVC PECPV AI Sbjct: 98 CVLC--QKCIDVCPIEIISIPGVIDKPKKEVKAPKEPIVVTDDCVGCGVCVPECPVGAIT 155 Query: 57 PDT 59 + Sbjct: 156 LED 158 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C+ C CVE+CP D EN + + P C C +C CPV+A+ + + Sbjct: 202 VDAEKCVYCL--KCVEICPGDMIKVDENNMIVVPPKSCPACKLCVNTCPVNALDLEVK 257 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + E + CI CG C CP A+K Sbjct: 280 KKCASVCPTEAIIVDEEKREV--RMCIVCGACTVACPTGALK 319 >gi|238756491|ref|ZP_04617796.1| Electron transport complex protein rnfB [Yersinia ruckeri ATCC 29473] gi|238705278|gb|EEP97690.1| Electron transport complex protein rnfB [Yersinia ruckeri ATCC 29473] Length = 207 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDESNCIGC--TKCIQACPVDAIIGATRAMHTVLPDLCTGCDLCVDPCPTDCIE 163 >gi|225181056|ref|ZP_03734503.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168253|gb|EEG77057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 416 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG---ENFLAIHPDECIDCGVCEPECPVDA 54 V E C C CV+ CPVD E I + C+ CGVC +CP A Sbjct: 286 VLEGCTGCG--KCVQACPVDAIGVTDKEEKKAQIDTEYCLGCGVCTVQCPTKA 336 Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 40 CIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKE 85 C CG C CPVDAI E +I++EY T + Sbjct: 290 CTGCGKCVQACPVDAI--GVTDKEEKKAQIDTEYCLGCGVCTVQCP 333 >gi|15668327|ref|NP_247123.1| formate dehydrogenase, iron-sulfur subunit [Methanocaldococcus jannaschii DSM 2661] gi|2833496|sp|Q57619|FER8_METJA RecName: Full=Uncharacterized ferredoxin MJ0155 gi|1498926|gb|AAB98137.1| formate dehydrogenase, iron-sulfur subunit [Methanocaldococcus jannaschii DSM 2661] Length = 151 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C++ C E+CPVD Y + + + CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKDGIPIVDKERCIACGMCAIACPIGAIF 89 >gi|289803762|ref|ZP_06534391.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 148 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 25 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 77 >gi|220935363|ref|YP_002514262.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996673|gb|ACL73275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 244 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+H CV+VCP F + + ++ CI C C CP A Sbjct: 106 CQHCEHPPCVDVCPTGASFRRADGIVLVNKHTCIGCRYCMMACPYKA 152 >gi|161503521|ref|YP_001570633.1| hypothetical protein SARI_01597 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864868|gb|ABX21491.1| hypothetical protein SARI_01597 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 250 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 106 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 164 >gi|330937551|gb|EGH41492.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 291 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGASKLMHTVII-DECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIIDECTGCDL--CVAPCPVDCIEM 138 >gi|310825953|ref|YP_003958310.1| putative nitrite and sulfite reductase subunit [Eubacterium limosum KIST612] gi|308737687|gb|ADO35347.1| putative nitrite and sulfite reductase subunit [Eubacterium limosum KIST612] Length = 311 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CP+D + L I ++C +CG+C C DAI PD E ++++ Sbjct: 171 CKGCSKCSVEDRCPMDAATVTDGKLVIDEEKCNNCGLCVDNCRFDAI-PDGEVRYKVYV 228 >gi|300245743|gb|ADJ93929.1| putative aromatic-degrading BamH [Clostridia bacterium enrichment culture clone BF] Length = 595 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V E C C C +VCPV L I P++C C C C AIK Sbjct: 543 IVPEECKKCG--ACAKVCPVGAIKGKPKELHEIDPEKCTKCEACIKACHFKAIK 594 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +VCP + + + I P+EC CG C CPV AIK Sbjct: 528 KVCPAG-VCKKLSKIRIVPEECKKCGACAKVCPVGAIK 564 >gi|261403601|ref|YP_003247825.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370594|gb|ACX73343.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 391 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVT++C+ C CV CPV + I +C+ C +C CP +AI Sbjct: 134 VVTDDCVGCGV--CVPECPVGAITLEDGKAVIDKSKCVYCSICAQTCPWNAIF 184 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 14/63 (22%) Query: 9 CILCKHTDCVEVCPVDCF-----YEGENFLAIHP-------DECIDCGVCEPECPVDAIK 56 C+LC C++VCP++ + P D+C+ CGVC PECPV AI Sbjct: 98 CVLC--QKCIDVCPIEIISIPGVIDKPKKEVKAPKEPIVVTDDCVGCGVCVPECPVGAIT 155 Query: 57 PDT 59 + Sbjct: 156 LED 158 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C+ C CVE+CP D EN + + P C C +C CPV+A+ + + Sbjct: 202 VDAEKCVYCL--KCVEICPGDMIKVDENNMIVVPPKSCPACKLCVNTCPVNALDLEVK 257 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + E + CI CG C CP A+K Sbjct: 280 KKCASVCPTEAIIVDEEKREV--RMCIVCGACTVACPTGALK 319 >gi|237755465|ref|ZP_04584088.1| sulfur reductase FeS subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237692365|gb|EEP61350.1| sulfur reductase FeS subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 211 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + V C C++ C +CPV + N + + + CI C C CP +AI D Sbjct: 51 HFVPLRCNHCENAPCERICPVSALHYLPNGIVNVDHNRCIGCASCMMACPYNAIYID 107 Score = 41.7 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 31/120 (25%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPVDA 54 CI C C+ CP + I P D+C C C CP A Sbjct: 89 CIGC--ASCMMACPYNAI-------YIDPITNSADKCTYCAHRIEVGMMPACVVACPTHA 139 Query: 55 -IKPDTEPGLELWLKINSEYATQWPNITTKKESL---PSAAKMDGVKQKYEKYFSPNPGG 110 I D + +I S+Y + ++ +K L P + G + S P G Sbjct: 140 NIFGDLDDPES---EI-SKYLKEHRDVMVRKPELNTKPKHFYVRGSTVALDPLASERPEG 195 >gi|295091990|emb|CBK78097.1| Uncharacterized Fe-S center protein [Clostridium cf. saccharolyticum K10] Length = 368 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +++ + CI C C C E I +C+ CG C CPVDA+ Sbjct: 190 PFILQDQCIGC--HACERDCAHGAISFPEKKAFIDESKCVGCGRCIGVCPVDAV 241 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D+CI C CE +C AI P + ++ Sbjct: 191 FILQDQCIGCHACERDCAHGAISF---PEKKAFID 222 >gi|157148251|ref|YP_001455570.1| electron transport protein HydN [Citrobacter koseri ATCC BAA-895] gi|157085456|gb|ABV15134.1| hypothetical protein CKO_04068 [Citrobacter koseri ATCC BAA-895] Length = 195 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 72 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 124 >gi|325830836|ref|ZP_08164220.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325487243|gb|EGC89686.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 214 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+T+ C C C + CP C EG AI + C+ CG+C C AI Sbjct: 161 FVITDRCQECG--ACADACPEACIEEGPP-YAIVQEHCLRCGLCRETCSFGAI 210 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 10/20 (50%) Query: 38 DECIDCGVCEPECPVDAIKP 57 D C +CG C CP I+ Sbjct: 165 DRCQECGACADACPEACIEE 184 >gi|257064377|ref|YP_003144049.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792030|gb|ACV22700.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 174 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ +C+ C+ C+EVCP + + + D CI C C CP A D Sbjct: 59 VSVSCMHCEKPACLEVCPAGAISKTIGGIVVVDKDLCIGCKYCYQACPFQAPHYD 113 >gi|153953876|ref|YP_001394641.1| hypothetical protein CKL_1251 [Clostridium kluyveri DSM 555] gi|219854491|ref|YP_002471613.1| hypothetical protein CKR_1148 [Clostridium kluyveri NBRC 12016] gi|146346757|gb|EDK33293.1| Conserved hypothetical protein containing a ferredoxin domain [Clostridium kluyveri DSM 555] gi|219568215|dbj|BAH06199.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 273 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +NC CK CV VCP+ + ++ CI CG C +CP A D E L Sbjct: 201 DNCTDCK--ICVNVCPMGSIDFKD--VSKLNGICIKCGACIKKCPHGAKYYDDEDYLRHK 256 Query: 67 LKINSEYATQ 76 ++ E+A++ Sbjct: 257 YELEIEFASR 266 >gi|302386104|ref|YP_003821926.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium saccharolyticum WM1] gi|302196732|gb|ADL04303.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium saccharolyticum WM1] Length = 368 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V E CI C C + C I + C+ CG C CPVDA++ D + Sbjct: 190 PHVTEETCIGC--HACEKNCAHSAISFQNKKAGIDHNLCVGCGRCIGVCPVDAVETDFDE 247 Query: 62 GLELWLKINSEYAT 75 ++ +N + A Sbjct: 248 SNDI---LNCKIAE 258 >gi|255322208|ref|ZP_05363354.1| methyl-accepting chemotaxis sensory transducer [Campylobacter showae RM3277] gi|255300581|gb|EET79852.1| methyl-accepting chemotaxis sensory transducer [Campylobacter showae RM3277] Length = 246 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ C++VCP Y+ N + ++ ECI C +C CP A Sbjct: 95 CNHCENPACIDVCPTGASYQRSNGIVKVNSAECIGCALCAEACPYHA 141 >gi|283797800|ref|ZP_06346953.1| iron-sulfur cluster-binding protein [Clostridium sp. M62/1] gi|291074483|gb|EFE11847.1| iron-sulfur cluster-binding protein [Clostridium sp. M62/1] Length = 368 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +++ + CI C C C E I +C+ CG C CPVDA+ Sbjct: 190 PFILQDQCIGC--HACERDCAHGAISFPEKKAFIDESKCVGCGRCIGVCPVDAV 241 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D+CI C CE +C AI P + ++ Sbjct: 191 FILQDQCIGCHACERDCAHGAISF---PEKKAFID 222 >gi|312136493|ref|YP_004003830.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] gi|311224212|gb|ADP77068.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermus fervidus DSM 2088] Length = 128 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 3 YVVTENCILC--KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V C+ C K+ C+ +CP D + + I D+CI CG C CPV AI D Sbjct: 29 YKVPIFCLHCDPKNAPCLNICPSDAIKSINDAIVIDRDKCIGCGSCVNVCPVGAIFLDER 88 Query: 61 PGLEL 65 E Sbjct: 89 GLAEK 93 Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG--VCEPECPVDAIKPDTEPGLE 64 + CI C CV VCPV + E LA D CID +C CP ++ + + Sbjct: 66 DKCIGCG--SCVNVCPVGAIFLDERGLAEKCDLCIDFEEPLCVKVCPTGCLRENFSDEDD 123 >gi|295115197|emb|CBL36044.1| Uncharacterized Fe-S center protein [butyrate-producing bacterium SM4/1] Length = 368 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +++ + CI C C C E I +C+ CG C CPVDA+ Sbjct: 190 PFILQDQCIGC--HACERDCAHGAISFPEKKAFIDESKCVGCGRCIGVCPVDAV 241 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D+CI C CE +C AI P + ++ Sbjct: 191 FILQDQCIGCHACERDCAHGAISF---PEKKAFID 222 >gi|260769053|ref|ZP_05877987.1| electron transport complex protein RnfB [Vibrio furnissii CIP 102972] gi|260617083|gb|EEX42268.1| electron transport complex protein RnfB [Vibrio furnissii CIP 102972] gi|315180794|gb|ADT87708.1| electron transport complex protein RnfB [Vibrio furnissii NCTC 11218] Length = 199 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|322418857|ref|YP_004198080.1| electron transfer flavoprotein alpha/beta-subunit [Geobacter sp. M18] gi|320125244|gb|ADW12804.1| Electron transfer flavoprotein alpha/beta-subunit [Geobacter sp. M18] Length = 441 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CI C C CPVD + I CI C C CPV A++ P Sbjct: 22 CIACGAR-CQSACPVDAIQMNDAGEPIIDASRCIGCVKCVKVCPVQALEMSFTPEE 76 Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Query: 38 DECIDCGV-CEPECPVDAIKPDT 59 ++CI CG C+ CPVDAI+ + Sbjct: 20 NKCIACGARCQSACPVDAIQMND 42 >gi|256810211|ref|YP_003127580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793411|gb|ACV24080.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 390 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ C CV CPV+ +N I +CI C +C CP +AI Sbjct: 135 VTDACVGCGV--CVPECPVNAISIEDNKAVIDKSKCIYCSICAQTCPWNAIY 184 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C CVEVCP D + EN + + P C CG+C CPV+A++ D + Sbjct: 202 VEAEKCIYCL--KCVEVCPGDMIKVDNENMIVVPPKSCPACGLCVNICPVNALELDVK 257 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVD-----CFYEGENFLAIHP-------DECIDCGVCEPECPVDAIK 56 C+LC C++VCP++ + P D C+ CGVC PECPV+AI Sbjct: 98 CVLC--QKCIDVCPIEIISLPGIIDKPRREVKAPKDPIAVTDACVGCGVCVPECPVNAIS 155 Query: 57 PDTE 60 + Sbjct: 156 IEDN 159 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + + + CI CG C CP A+K Sbjct: 280 KKCASVCPTEAIVVDDEKKEV--KMCIVCGACTVACPTGALK 319 >gi|114566336|ref|YP_753490.1| formate dehydrogenase iron-sulfur subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337271|gb|ABI68119.1| formate dehydrogenase beta subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 266 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C++VCP + + E H PD+CI C C CP + K Sbjct: 75 CMHCFDPACMKVCPRQAYSKTEWGATFHDPDKCIGCQYCTYACPFEVPKYRKRED 129 >gi|206900762|ref|YP_002250635.1| NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit [Dictyoglomus thermophilum H-6-12] gi|206739865|gb|ACI18923.1| NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit [Dictyoglomus thermophilum H-6-12] Length = 596 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 V+ E C C + C CPV Y+ E+ I +C CG+C CP IK + Sbjct: 543 VIREECRKC--SICFRNCPVGAIYKDEDGTYVIDQSKCTKCGICFQVCPFKVIKKE 596 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + +EC C +C CPV AI D + Sbjct: 540 HYEVIREECRKCSICFRNCPVGAIYKDED 568 >gi|324005433|gb|EGB74652.1| 4Fe-4S binding domain protein [Escherichia coli MS 57-2] Length = 289 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 69 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCPGCRYCMVACPYNVPKYD 124 >gi|238749925|ref|ZP_04611429.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia rohdei ATCC 43380] gi|238711854|gb|EEQ04068.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia rohdei ATCC 43380] Length = 180 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 102 >gi|171058834|ref|YP_001791183.1| putative glutamate synthase (NADPH) small subunit [Leptothrix cholodnii SP-6] gi|170776279|gb|ACB34418.1| Glutamate synthase (NADH) [Leptothrix cholodnii SP-6] Length = 571 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 9 CILCKHT----DCVEVCPVDC-FYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C + +C VCP + G I+ D C CG+C ECP AI+ E G Sbjct: 512 CLSCGNCFECDNCYGVCPDNAVIKLGPGRRFEINLDYCKGCGMCAAECPCGAIEMVAETG 571 >gi|16760525|ref|NP_456142.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764735|ref|NP_460350.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141714|ref|NP_805056.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|207857109|ref|YP_002243760.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584104|ref|YP_002637902.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|4456871|emb|CAB37414.1| tetrathionate reductase subunit B (TtrB) [Salmonella typhimurium] gi|11139591|gb|AAG31757.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419905|gb|AAL20309.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502821|emb|CAD01980.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi] gi|29137342|gb|AAO68905.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|206708912|emb|CAR33242.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468631|gb|ACN46461.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246591|emb|CBG24401.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993272|gb|ACY88157.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157920|emb|CBW17415.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323129656|gb|ADX17086.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623491|gb|EGE29836.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988272|gb|AEF07255.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 250 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 106 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 164 >gi|89895846|ref|YP_519333.1| formate dehydrogenase beta subunit [Desulfitobacterium hafniense Y51] gi|89335294|dbj|BAE84889.1| formate dehydrogenase beta subunit [Desulfitobacterium hafniense Y51] Length = 271 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C++ C + + E F I D+CI CG C CP D + D Sbjct: 74 CFHCADAACLKACSSEAISKTETGFTIIDEDKCIGCGYCVTNCPFDIPRID 124 >gi|221067205|ref|ZP_03543310.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|220712228|gb|EED67596.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] Length = 235 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C CV VCPV F + + + + C+ CG C CP DA I +T+ + Sbjct: 90 CNHCDEPPCVPVCPVQATFQRTDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 148 >gi|205354067|ref|YP_002227868.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273848|emb|CAR38847.1| hydrogenase-2 small subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629183|gb|EGE35526.1| hydrogenase-2 subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 328 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H D+ C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHHDKDVCTGCRYCMVACPYNVPKYD 163 >gi|167630112|ref|YP_001680611.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] gi|167592852|gb|ABZ84600.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein [Heliobacterium modesticaldum Ice1] Length = 373 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V + C +C C+ CPVD GE I + CI CG C CP AI + + Sbjct: 189 VNDKCKVCG--KCLRWCPVDAISLGER-AVIAGERCIGCGECTVTCPHKAIAVNWKTDAG 245 Query: 65 LWLKINSEYA 74 L + +EYA Sbjct: 246 LLQEKMAEYA 255 >gi|168263787|ref|ZP_02685760.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194445522|ref|YP_002040639.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197262048|ref|ZP_03162122.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194404185|gb|ACF64407.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197240303|gb|EDY22923.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205347598|gb|EDZ34229.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 244 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|123443024|ref|YP_001006998.1| 4Fe-4S ferrodoxin [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089985|emb|CAL12842.1| 4Fe-4S ferrodoxin [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 180 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 102 >gi|222054732|ref|YP_002537094.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221564021|gb|ACM19993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 284 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + + CI C C CP K + Sbjct: 82 EMCMHCNDPACASVCPVGAFNKTKEGPVVYDTKRCIGCRFCMVACPFGVPKYE 134 >gi|78221904|ref|YP_383651.1| electron transfer flavoprotein subunit alpha [Geobacter metallireducens GS-15] gi|78193159|gb|ABB30926.1| Electron transfer flavoprotein, alpha subunit [Geobacter metallireducens GS-15] Length = 443 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C C CPVD + I ++CI C C CP DA++ P Sbjct: 17 IPGKCIACGAR-CQSACPVDAIEMSDAGEPIILSEKCIGCLKCVKVCPADALEMFFTPEE 75 Query: 64 ELWLKINSEYATQ 76 LKI E A Q Sbjct: 76 ---LKILEELARQ 85 >gi|73670065|ref|YP_306080.1| CoB--CoM heterodisulfide reductase subunit A [Methanosarcina barkeri str. Fusaro] gi|72397227|gb|AAZ71500.1| CoB--CoM heterodisulfide reductase subunit A [Methanosarcina barkeri str. Fusaro] Length = 792 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 19/84 (22%) Query: 3 YVVTENCILCKHTDCVEVCPVD-------------CFYE-----GENFLAIHPDECIDCG 44 +++ + C C C VCPV+ Y + I PD C+ CG Sbjct: 237 FILEDKCKGCVDL-CSAVCPVEIENPMNYGVGKTRAIYMPIPQSVPQVVLIDPDHCVGCG 295 Query: 45 VCEPECPVDAIKPDTEPGLELWLK 68 +C CP DA+ + +P + Sbjct: 296 LCLQACPADAVDYEQKPEEIEFEA 319 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V E CI C C+EVC + C CG C CP AI+ Sbjct: 573 AHVDPEKCIGC--RTCLEVCKFGKIKIENKKAVVDEVSCYGCGDCSAACPAGAIQ 625 >gi|219670276|ref|YP_002460711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219540536|gb|ACL22275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 271 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C++ C + + E F I D+CI CG C CP D + D Sbjct: 74 CFHCADAACLKACSSEAISKTETGFTIIDEDKCIGCGYCVTNCPFDIPRID 124 >gi|332161092|ref|YP_004297669.1| 4Fe-4S ferrodoxin [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604971|emb|CBY26469.1| electron transport protein HydN [Yersinia enterocolitica subsp. palearctica Y11] gi|325665322|gb|ADZ41966.1| 4Fe-4S ferrodoxin [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863812|emb|CBX73907.1| electron transport protein hydN [Yersinia enterocolitica W22703] Length = 180 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 102 >gi|317055121|ref|YP_004103588.1| coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein [Ruminococcus albus 7] gi|315447390|gb|ADU20954.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Ruminococcus albus 7] Length = 410 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDE--CIDCGVCEPECPV 52 V ++C C + C+ CP +C +GE FL + DE C+DCG C CPV Sbjct: 7 VKKDCCGC--SACMNSCPRNCITMQPDGEGFLYPNVDEKLCVDCGRCVNVCPV 57 >gi|300853896|ref|YP_003778880.1| putative Fe-S-cluster-containing hydrogenase components 2 [Clostridium ljungdahlii DSM 13528] gi|300434011|gb|ADK13778.1| predicted Fe-S-cluster-containing hydrogenase components 2 [Clostridium ljungdahlii DSM 13528] Length = 188 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C + CPV+ +++++ D C+ C +C CP AI+ Sbjct: 60 CRQCEDAPCGKACPVNAISNENGYVSVNKDVCVGCKICMLACPFGAIE 107 >gi|163752219|ref|ZP_02159421.1| hypothetical protein KT99_10608 [Shewanella benthica KT99] gi|161327900|gb|EDP99078.1| hypothetical protein KT99_10608 [Shewanella benthica KT99] Length = 697 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE-GENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 ++ C C C++ CP + + E + P+ C CG C CP +A + D Sbjct: 168 ISMACNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLD 223 >gi|147678456|ref|YP_001212671.1| hypothetical protein PTH_2121 [Pelotomaculum thermopropionicum SI] gi|146274553|dbj|BAF60302.1| Uncharacterized Fe-S center protein [Pelotomaculum thermopropionicum SI] Length = 367 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C+ C + CP + ++CI CG C CPV AI Sbjct: 190 VNPEKCTGCE--RCSQWCPAQAIGVRGRVSVVDENKCIGCGECTVTCPVHAI 239 >gi|315299687|gb|EFU58929.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] Length = 459 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 16/118 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 327 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 386 Query: 64 ELWLKINSEYATQWPNITTK----------KESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + S A +P I +E P + KY +Y PG Sbjct: 387 KCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQ-ENKYYQY--QLPGAG 441 >gi|238761063|ref|ZP_04622040.1| Electron transport protein hydN [Yersinia kristensenii ATCC 33638] gi|238761316|ref|ZP_04622292.1| Electron transport protein hydN [Yersinia kristensenii ATCC 33638] gi|238700290|gb|EEP93031.1| Electron transport protein hydN [Yersinia kristensenii ATCC 33638] gi|238700543|gb|EEP93283.1| Electron transport protein hydN [Yersinia kristensenii ATCC 33638] Length = 190 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 64 TIMCRHCEDAPCANVCPNGAIVRAADSIQVLQEKCIGCKTCVVACPYGA 112 >gi|56412592|ref|YP_149667.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361527|ref|YP_002141163.1| anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126849|gb|AAV76355.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093003|emb|CAR58436.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 209 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP DA + + Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYDAPQLNE 130 Query: 60 EPGL 63 + Sbjct: 131 QTSQ 134 >gi|15669380|ref|NP_248188.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|41018414|sp|Q58593|VHUB_METJA RecName: Full=Polyferredoxin protein vhuB gi|1591821|gb|AAB99195.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 394 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ C CV CPV+ N I +CI C +C CP +AI Sbjct: 138 VTDACVGCG--ICVPECPVNAITLENNKAVIDKSKCIYCSICAQTCPWNAIF 187 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C CVEVCP D + EN + I P C C +C CPVDA+ + + Sbjct: 205 VNAEKCIYCL--KCVEVCPGDMIKVDEENLIVIPPKSCPACKLCVNICPVDALDLEVK 260 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C VCP + E + CI CG C CP A+K Sbjct: 283 KKCASVCPTEAIVVDEEKKEV--RMCIVCGACTVACPTGALK 322 >gi|148262936|ref|YP_001229642.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146396436|gb|ABQ25069.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 261 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ E+ + + CI CG C CP Sbjct: 127 AFFVPKLCNQCDNPPCVQVCPVGATYQTEDGVVLVDRSWCIGCGYCIMGCPYG 179 >gi|88808579|ref|ZP_01124089.1| ferredoxin [Synechococcus sp. WH 7805] gi|88787567|gb|EAR18724.1| ferredoxin [Synechococcus sp. WH 7805] Length = 74 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C G+ +F I + CIDCG+C CPV Sbjct: 1 MAHTIVTDICEGV--ADCVDACPVACIQPGKGKNKKGTDFYWIDFETCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 D AI + L+ Sbjct: 59 DGAILAEERQELQK 72 >gi|330966554|gb|EGH66814.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 310 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 103 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCVAPCPVDCIEMHA 159 Query: 60 EP 61 P Sbjct: 160 LP 161 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 132 MHTVIIDECTGCDL--CVAPCPVDCIEM 157 >gi|303244452|ref|ZP_07330787.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485150|gb|EFL48079.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 132 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 + CI C C+ CPV E+F I +ECI C C CPV AI Sbjct: 80 DKCIDCG--ACLVHCPVKAITMNEDFKVIFDENECIGCKNCANVCPVKAI 127 Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + D+CIDCG C CPV AI + + Sbjct: 72 PKMIQKNDDKCIDCGACLVHCPVKAITMNED 102 >gi|206900688|ref|YP_002250628.1| ferredoxin 2 [Dictyoglomus thermophilum H-6-12] gi|206739791|gb|ACI18849.1| ferredoxin 2 [Dictyoglomus thermophilum H-6-12] Length = 443 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C H C+ CP + I P CIDCG C CP A Sbjct: 14 QRCRGCIH--CIRHCPTEAMRVRNGKSLIIPYRCIDCGECIRVCPYHAPF 61 >gi|253699697|ref|YP_003020886.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251774547|gb|ACT17128.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 260 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ E+ + + CI CG C CP Sbjct: 126 AFFVPKLCNQCDNPPCVQVCPVGATYQTEDGVVLVDRKWCIGCGYCIMGCPYG 178 >gi|78222168|ref|YP_383915.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Geobacter metallireducens GS-15] gi|78193423|gb|ABB31190.1| Indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative [Geobacter metallireducens GS-15] Length = 601 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +++ C C++ CP + E E +AI C DCGVC CP AI+ Sbjct: 546 ISDACNGCRYCTTQFECPALVYDEEEKRVAIDTLICTDCGVCIDVCPRLAIEE 598 >gi|255994340|ref|ZP_05427475.1| protein HymB [Eubacterium saphenum ATCC 49989] gi|255993053|gb|EEU03142.1| protein HymB [Eubacterium saphenum ATCC 49989] Length = 593 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 TY + + C+ C T C CPV I ++CI CG C C ++ D Sbjct: 538 TYTILDTCVGC--TACARNCPVGAITGSPKGQHVIDQEKCIKCGKCLESCRFSSVNLD 593 >gi|291288473|ref|YP_003505289.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885633|gb|ADD69333.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 221 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + V + C C C+ CP ++ EN + ++ D CI CG C CP A Sbjct: 53 HFVPKLCNNCDDAPCIAACPTGATFKMENGIVAVNRDTCIGCGRCAEMCPYGA 105 >gi|134100101|ref|YP_001105762.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291002905|ref|ZP_06560878.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133912724|emb|CAM02837.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 300 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C P CP I Sbjct: 120 SDVCKHCTHAACLDVCPTGALFRTEYGTVVVQDDVCNGCGYCVPACPYGVI 170 >gi|73748066|ref|YP_307305.1| putative Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit [Dehalococcoides sp. CBDB1] gi|147668904|ref|YP_001213722.1| formate dehydrogenase beta subunit [Dehalococcoides sp. BAV1] gi|289432093|ref|YP_003461966.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalococcoides sp. GT] gi|73659782|emb|CAI82389.1| putative Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit [Dehalococcoides sp. CBDB1] gi|146269852|gb|ABQ16844.1| formate dehydrogenase beta subunit [Dehalococcoides sp. BAV1] gi|288945813|gb|ADC73510.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalococcoides sp. GT] Length = 267 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C CV VCPV ++ N + D+C C C+ CP + K + + Sbjct: 73 CLHCYEPACVSVCPVGALHKRPNGAVVWDQDKCFGCRYCQNACPFEIPKFEWDDNWAK 130 >gi|298506822|gb|ADI85545.1| electron transfer flavoprotein, alpha subunit [Geobacter sulfurreducens KN400] Length = 447 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C C CPV+C + I ++CI C C CP +A++ P Sbjct: 17 IEGKCIACGAR-CQSACPVNCIDMNDAGEPIILSEKCIGCVKCVKVCPAEALEMFFTPEE 75 Query: 64 ELWLKINSEYATQ 76 LKI E A Q Sbjct: 76 ---LKILEELARQ 85 >gi|260773761|ref|ZP_05882676.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio metschnikovii CIP 69.14] gi|260610722|gb|EEX35926.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio metschnikovii CIP 69.14] Length = 204 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ C C C +VCP ++ E+ I CI C +C CP A + E Sbjct: 59 SYYLSIACNHCDEPACAKVCPSGAMHKREDGFVIVDEAVCIGCKLCAMSCPYGAPQYSEE 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|296110007|ref|YP_003616956.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434821|gb|ADG13992.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 136 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C+ CP + + I ++CI CG+C CP AIK Sbjct: 32 CYHCEGNPCLLACPKEAIKRINGKVVIIEEKCIGCGLCALACPFGAIK 79 >gi|257792497|ref|YP_003183103.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317490367|ref|ZP_07948851.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833565|ref|ZP_08166014.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|257476394|gb|ACV56714.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316910502|gb|EFV32127.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485489|gb|EGC87958.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 194 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 1 MT-YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 MT Y + C C CV VCP + +G N + I ++CI C C CP Sbjct: 50 MTRYPLPTMCQQCADAPCVHVCPTGASYRDGNNVVLIDREKCIGCKYCMMACPYG 104 >gi|160902190|ref|YP_001567771.1| NADH dehydrogenase (quinone) [Petrotoga mobilis SJ95] gi|160359834|gb|ABX31448.1| NADH dehydrogenase (quinone) [Petrotoga mobilis SJ95] Length = 485 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ ENC C T C VCP + E I ++CI CG C C +AIK Sbjct: 432 IIPENCTGC--TACARVCPTEAIQGELRKPHTIDQEKCIKCGSCYTTCRFNAIK 483 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P+ C C C CP +AI+ + Sbjct: 430 YEIIPENCTGCTACARVCPTEAIQGELRKPH 460 >gi|238792134|ref|ZP_04635769.1| Electron transport complex protein rnfB [Yersinia intermedia ATCC 29909] gi|238728371|gb|EEQ19890.1| Electron transport complex protein rnfB [Yersinia intermedia ATCC 29909] Length = 207 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|327398732|ref|YP_004339601.1| Indolepyruvate ferredoxin oxidoreductase [Hippea maritima DSM 10411] gi|327181361|gb|AEA33542.1| Indolepyruvate ferredoxin oxidoreductase [Hippea maritima DSM 10411] Length = 600 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV + C CK C+ CP F + + I CI CG C CP AIK Sbjct: 544 YVDKDKCTGCKV--CINRFECPSLVFDASDKKVGIDVSTCIKCGQCVFSCPYGAIK 597 >gi|312137027|ref|YP_004004364.1| archaeoflavoprotein, mj0208 family [Methanothermus fervidus DSM 2088] gi|311224746|gb|ADP77602.1| archaeoflavoprotein, MJ0208 family [Methanothermus fervidus DSM 2088] Length = 234 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C+ CP D G + +CI CG CE CP +AI Sbjct: 145 DLCKNCETCKAAAACPTDAIIPGREIELL---KCIGCGSCEKACPYNAI 190 >gi|257790762|ref|YP_003181368.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474659|gb|ACV54979.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 260 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C+ C++ +CV VCP + ++ + I D CI CG C CP A Sbjct: 58 ACMHCENPECVSVCPTGASQKLDDGVVIVDYDACITCGYCMSACPYGA 105 >gi|225849205|ref|YP_002729369.1| sulfur reductase FeS subunit [Sulfurihydrogenibium azorense Az-Fu1] gi|225643270|gb|ACN98320.1| sulfur reductase FeS subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 211 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + V C C++ C +CPV + N + + + CI C C CP +AI D Sbjct: 51 HFVPLRCNHCENAPCERICPVSALHYLPNGIVNVDHNRCIGCASCMMACPYNAIYID 107 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 31/120 (25%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPVDA 54 CI C C+ CP + I P D+C C C CP A Sbjct: 89 CIGC--ASCMMACPYNAI-------YIDPITNSADKCTYCAHRIEVGMMPACVVACPTHA 139 Query: 55 -IKPDTEPGLELWLKINSEYATQWPNITTKKESL---PSAAKMDGVKQKYEKYFSPNPGG 110 I D + +I S+Y + ++ +K L P + G + S P G Sbjct: 140 NIFGDLDDPES---EI-SKYLKEHKDVMVRKPELNTKPKHFYVRGSTVALDPLASERPEG 195 >gi|119713742|gb|ABL97791.1| ferredoxin [uncultured marine bacterium HF10_29C11] Length = 63 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDT--EPGLELWLKINSEYATQWP 78 + +L I PDECIDCG C PECPV+AI DT E W+ N + P Sbjct: 2 DTYLIIDPDECIDCGACVPECPVEAIFADTDVPDEEEEWIDKNETESADAP 52 >gi|33862969|ref|NP_894529.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9313] gi|33634886|emb|CAE20872.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9313] Length = 74 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DC + CPV C G+ NF I+ D CIDCG+C CPV Sbjct: 1 MPHSIVTEICEGV--ADCAQACPVGCIQPGQGKNNKGRNFYLINFDICIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + A+ P+ L+ Sbjct: 59 EGAVLPEERRDLQ 71 >gi|15668691|ref|NP_247490.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|48474788|sp|Q57934|Y514_METJA RecName: Full=Uncharacterized polyferredoxin-like protein MJ0514 gi|1591217|gb|AAB98503.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 250 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C+E CP++ + + + I+ D+CI CG C CP +AIK Sbjct: 200 CVGCLV--CIEECPINAIDQDGDKVKINKDKCILCGRCVDVCPTNAIK 245 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ CI C C + CPVD + + I D+C+ C +C CPV AI Sbjct: 41 YINETKCIRCNL--CYKECPVDAIEKAKVKKSAKIIEDKCVKCEICAQTCPVGAIY 94 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 10/63 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-------HPDECIDCGVCEPECPVDAI 55 V + C+ C C EVCP C E E I + C+ C VC ECP++AI Sbjct: 158 VNLDLCMGCG--ACAEVCPKKCIKVERELGEVIKTRDIEVDKNLCVGCLVCIEECPINAI 215 Query: 56 KPD 58 D Sbjct: 216 DQD 218 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CI C C CP + + ++ D C+ CG C CP IK + E G Sbjct: 133 CIKCG--ICARFCPTNAIKAVRRKSIEVNLDLCMGCGACAEVCPKKCIKVERELGE 186 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 28/92 (30%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--------------------------HP 37 ++ + C+ C+ C + CPV Y E I Sbjct: 73 IIEDKCVKCE--ICAQTCPVGAIYVIEGRAEIEDSEVHYTIKEKSIPHRKIRLKKYELDE 130 Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + CI CG+C CP +AIK +E+ L + Sbjct: 131 NTCIKCGICARFCPTNAIKAVRRKSIEVNLDL 162 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 L I+ +CI C +C ECPVDAI+ Sbjct: 40 LYINETKCIRCNLCYKECPVDAIE 63 >gi|83952617|ref|ZP_00961347.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] gi|83835752|gb|EAP75051.1| iron-sulfur cluster-binding protein [Roseovarius nubinhibens ISM] Length = 264 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRTEDGIVLVNESDCIGCGLCAWACPYGARELDQAEG 143 >gi|332795922|ref|YP_004457422.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] gi|332693657|gb|AEE93124.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] Length = 419 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 4 VVTENCILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ NC+ + CV CP E + I ++C CG+C CPV AI Sbjct: 104 VINSNCLSSLGCNQCVTSCPQKAMSIVEGKVVIDENKCTYCGLCAASCPVGAI 156 Score = 40.1 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +NC LC C+ CP + F+ P +C+ C C C DAI Sbjct: 282 DNCTLCG--ACIRKCPTRSLKYNIKDNNVFIEFTPSKCVGCNKCVNVCEEDAI 332 >gi|323204947|gb|EFZ89933.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323222456|gb|EGA06828.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 130 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|313765371|gb|EFS36735.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL013PA1] gi|313815223|gb|EFS52937.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL059PA1] gi|313828528|gb|EFS66242.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL063PA2] gi|314915985|gb|EFS79816.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL005PA4] gi|314916891|gb|EFS80722.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL050PA1] gi|314921532|gb|EFS85363.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL050PA3] gi|314931144|gb|EFS94975.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL067PA1] gi|314954799|gb|EFS99205.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL027PA1] gi|314958965|gb|EFT03067.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL002PA1] gi|315099767|gb|EFT71743.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL059PA2] gi|315101927|gb|EFT73903.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL046PA1] gi|315110353|gb|EFT82329.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL030PA2] gi|327454802|gb|EGF01457.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL087PA3] gi|327455657|gb|EGF02312.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL083PA2] gi|328755857|gb|EGF69473.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL087PA1] gi|328756638|gb|EGF70254.1| dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL025PA2] Length = 213 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 TY + +C C+ C++ CP ++ + + D+C+ C CE CP A + Sbjct: 68 TYYTSVSCNHCEDPICMKACPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQY 124 >gi|225850220|ref|YP_002730454.1| 4Fe-4S binding domain protein [Persephonella marina EX-H1] gi|225646094|gb|ACO04280.1| 4Fe-4S binding domain protein [Persephonella marina EX-H1] Length = 360 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 8 NCILCKHTD-----CVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC + D CV+VCPV D Y E L I ++C++CG C CP +A Sbjct: 12 NCTHVYYRDSSCSKCVDVCPVKDAIYFDEGKLKIDDEKCVNCGACFGICPTEA 64 Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C + C +CP G + L I P C+ C +C CP + + + + + + Sbjct: 254 CTNC--SVCYNICPTGALKPGRDRLQILFEPSLCVKCKICHESCPENCLHLEEKLSFDTF 311 Query: 67 L 67 L Sbjct: 312 L 312 >gi|225026580|ref|ZP_03715772.1| hypothetical protein EUBHAL_00830 [Eubacterium hallii DSM 3353] gi|224956072|gb|EEG37281.1| hypothetical protein EUBHAL_00830 [Eubacterium hallii DSM 3353] Length = 656 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V++ E C C + C CPV + + I CI CG CE C AI + Sbjct: 600 FVISPERCKGC--SKCARNCPVGAISGQIKKPYVIDDSICIKCGACESACAFHAIHIE 655 Score = 40.5 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 10/45 (22%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C +C + I P+ C C C CPV AI Sbjct: 588 KCAAKNCTAL----------RRFVISPERCKGCSKCARNCPVGAI 622 >gi|322433771|ref|YP_004215983.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidobacterium sp. MP5ACTX9] gi|321161498|gb|ADW67203.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidobacterium sp. MP5ACTX9] Length = 529 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 C C DC++ CPVD + + + + +H D CI C C CP + + E G Sbjct: 105 CNHCLDADCLKGCPVDAYTKDPVSGIVLHSADACIGCSYCVWNCPYSVPQYNPERG 160 >gi|260597687|ref|YP_003210258.1| formate hydrogenlyase subunit 2 [Cronobacter turicensis z3032] gi|260216864|emb|CBA30397.1| Formate hydrogenlyase subunit 2 [Cronobacter turicensis z3032] Length = 243 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C +VCPV+ + ++ C+ C +C CP AI+ Sbjct: 91 QLCHHCEDAPCAQVCPVNAITREAGAIQLNESLCVSCKLCGIACPFGAIEF 141 >gi|223038486|ref|ZP_03608780.1| ubiquinol CytoChrome c oxidoreductase, cytochrome b subunit [Campylobacter rectus RM3267] gi|222880343|gb|EEF15430.1| ubiquinol CytoChrome c oxidoreductase, cytochrome b subunit [Campylobacter rectus RM3267] Length = 193 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 +T +C C C++VCPV + + EN + +H D+CI CG C CP +I Sbjct: 64 FITHSCHHCDEPACMDVCPVGAYIKLENGIVQPLH-DKCIGCGYCIVACPYGSI 116 >gi|303246144|ref|ZP_07332425.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] gi|302492540|gb|EFL52411.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] Length = 242 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ C+ VCPV Y+ + + I +C+ CG C CP A Sbjct: 92 CNHCEKPACIPVCPVKATYQRPDGIVVIDGTKCLGCGFCVQACPYGA 138 >gi|190192132|dbj|BAG48267.1| 4Fe-4S type iron-sulfur protein [Microcystis aeruginosa NIES-843] Length = 74 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT C DCV CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MPHSIVTGTCEGV--ADCVSACPVACIHPGPGKNVKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P P L+ Sbjct: 59 EGAILPQERPDLQK 72 >gi|325832002|ref|ZP_08165099.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 family protein [Eggerthella sp. HGA1] gi|325486323|gb|EGC88775.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 family protein [Eggerthella sp. HGA1] Length = 263 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C+ C++ +CV VCP + ++ + I D CI CG C CP A Sbjct: 58 ACMHCENPECVSVCPTGASQKLDDGVVIVDYDACITCGYCMSACPYGA 105 >gi|192358977|ref|YP_001981503.1| Electron transport complex protein rnfB [Cellvibrio japonicus Ueda107] gi|190685142|gb|ACE82820.1| Electron transport complex protein rnfB [Cellvibrio japonicus Ueda107] Length = 223 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 ++ + CI C T C++ CP+D + I DEC C +C CPVD I+ Sbjct: 115 AFIREDECIGC--TKCIQACPMDAILGAAKQMHTIIADECTGCDLCVEPCPVDCIEMIPV 172 Query: 60 EPGLELW 66 PGL+ W Sbjct: 173 VPGLDTW 179 >gi|171914161|ref|ZP_02929631.1| putative anaerobic reductase component [Verrucomicrobium spinosum DSM 4136] Length = 534 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 2 TYV--VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIH-PDECIDCGVCEPECPVDAIKP 57 YV VT C C C E CPV + + E + H D+CI C C +CP D K Sbjct: 103 PYVQTVTTACHHCTDPACAEGCPVLAYEKDEETGIVRHLDDQCIGCSYCILKCPYDVPKY 162 >gi|168822252|ref|ZP_02834252.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197251728|ref|YP_002146655.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204927473|ref|ZP_03218674.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238913210|ref|ZP_04657047.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|197215431|gb|ACH52828.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204322815|gb|EDZ08011.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205341348|gb|EDZ28112.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 244 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|148652690|ref|YP_001279783.1| electron transport complex, RnfABCDGE type subunit B [Psychrobacter sp. PRwf-1] gi|148571774|gb|ABQ93833.1| electron transport complex, RnfABCDGE type, B subunit [Psychrobacter sp. PRwf-1] Length = 275 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++CI C T C+ CPVD + I D C C +C CPVD I Sbjct: 113 DDCIGC--TKCIPACPVDAIIGTGKHMHTIFTDLCTGCELCLAPCPVDCI 160 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 22 PVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 PVD E I D+CI C C P CPVDAI Sbjct: 95 PVDAHTGRPTEVRAIIREDDCIGCTKCIPACPVDAI 130 >gi|90412117|ref|ZP_01220123.1| electron transport complex protein RnfB [Photobacterium profundum 3TCK] gi|90326841|gb|EAS43226.1| electron transport complex protein RnfB [Photobacterium profundum 3TCK] Length = 192 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIEMIPV 163 Query: 58 -DTEPGLEL 65 DT + Sbjct: 164 KDTPESWKW 172 >gi|255655479|ref|ZP_05400888.1| putative iron-sulfur protein [Clostridium difficile QCD-23m63] gi|296451471|ref|ZP_06893208.1| probable iron-sulfur protein [Clostridium difficile NAP08] gi|296880180|ref|ZP_06904146.1| probable iron-sulfur protein [Clostridium difficile NAP07] gi|296259738|gb|EFH06596.1| probable iron-sulfur protein [Clostridium difficile NAP08] gi|296428769|gb|EFH14650.1| probable iron-sulfur protein [Clostridium difficile NAP07] Length = 424 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPEC 50 E+C+ C C+ CP+D +G+ ++ I D C+ CGVC C Sbjct: 293 ESCVKCG--KCIAACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNC 338 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ + C+ CG C CP+DAI E G + ++KI+ + Sbjct: 290 INHESCVKCGKCIAACPIDAISKVKEDG-KEYIKIDED 326 >gi|75910458|ref|YP_324754.1| XRE family transcriptional regulator [Anabaena variabilis ATCC 29413] gi|75704183|gb|ABA23859.1| transcriptional regulator, XRE family [Anabaena variabilis ATCC 29413] Length = 531 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 7/65 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG-----VCEPECPVDAI 55 M Y +T CI C +CV +CP + I P C +C C CP ++ Sbjct: 1 MPYAITNRCIQC--ANCVPLCPQGAIKVIDGDYWIDPSLCNNCEDYLEPQCVICCPANSP 58 Query: 56 KPDTE 60 P Sbjct: 59 IPSQP 63 >gi|251790305|ref|YP_003005026.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Dickeya zeae Ech1591] gi|247538926|gb|ACT07547.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya zeae Ech1591] Length = 180 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIQCRHCEDAPCANVCPNGAIVHAGDHIRVQQEKCIGCKTCVVACPYGA 102 >gi|160899678|ref|YP_001565260.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Delftia acidovorans SPH-1] gi|160365262|gb|ABX36875.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Delftia acidovorans SPH-1] Length = 281 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ + + + + C+ CG C CP DA I +T+ + Sbjct: 137 CNHCDNPPCVPVCPVQATFQRSDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 195 >gi|300246023|gb|ADJ94069.1| putative respiratory-chain NADH dehydrogenase [Clostridia bacterium enrichment culture clone BF] Length = 597 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +V +NC C C VCP E + I +CI CG C +C +AI Sbjct: 544 IVADNCKGCG--ACARVCPASAITGEKKEAHVIDTSKCIKCGSCIEKCKFNAI 594 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 12/29 (41%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I D C CG C CP AI + + Sbjct: 544 IVADNCKGCGACARVCPASAITGEKKEAH 572 >gi|262279872|ref|ZP_06057657.1| NADH:ubiquinone oxidoreductase [Acinetobacter calcoaceticus RUH2202] gi|262260223|gb|EEY78956.1| NADH:ubiquinone oxidoreductase [Acinetobacter calcoaceticus RUH2202] Length = 263 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 87 IREDECIGCTKCISACPVDAI 107 >gi|145637713|ref|ZP_01793366.1| electron transport complex protein RnfB [Haemophilus influenzae PittHH] gi|145641064|ref|ZP_01796645.1| electron transport complex protein RnfB [Haemophilus influenzae R3021] gi|148827107|ref|YP_001291860.1| electron transport complex protein RnfB [Haemophilus influenzae PittGG] gi|145269115|gb|EDK09065.1| electron transport complex protein RnfB [Haemophilus influenzae PittHH] gi|145274225|gb|EDK14090.1| electron transport complex protein RnfB [Haemophilus influenzae 22.4-21] gi|148718349|gb|ABQ99476.1| electron transport complex protein RnfB [Haemophilus influenzae PittGG] Length = 218 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP D I Sbjct: 103 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCI 155 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E I + CI C C CPVDAI Sbjct: 100 EKVAFIDENMCIGCTKCIQACPVDAI 125 >gi|37521054|ref|NP_924431.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421] gi|35212050|dbj|BAC89426.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421] Length = 75 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV+ CPV C +G N+ I CIDCG+C CPV Sbjct: 1 MPHTIVTDVCEGI--ADCVDACPVSCIDQGPGKNAKGTNWYWIDFATCIDCGICLQVCPV 58 Query: 53 -DAIKPDTEPGLEL 65 AI P+ +P L+ Sbjct: 59 NGAILPEEKPELQK 72 >gi|327309967|ref|YP_004336864.1| Iron-sulfur protein [Thermoproteus uzoniensis 768-20] gi|326946446|gb|AEA11552.1| Iron-sulfur protein [Thermoproteus uzoniensis 768-20] Length = 441 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CV+VCP + +++ P +C +CG+C CP A+ ++I + A Sbjct: 119 CVDVCPTGALKLADRSVSVDPSKCTECGLCISSCPTGALSAPGADD----VEIAAALAKA 174 Query: 77 WPNITTK 83 + T++ Sbjct: 175 RLHGTSR 181 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C LC C CP F L ++P +C+ CG CE CP AI Sbjct: 313 CSLCGV--CFAKCPQRAFDVSRTGDAIKLTLNPLKCVGCGYCEEVCPEKAI 361 >gi|325681301|ref|ZP_08160830.1| protein HymB [Ruminococcus albus 8] gi|324106992|gb|EGC01279.1| protein HymB [Ruminococcus albus 8] Length = 378 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 +V + C C T C CP +N I D+CI CGVC C AI Sbjct: 325 IVADKCKGC--TLCARNCPAGAITGTVKNPHVIDTDKCIKCGVCMSNCKFGAI 375 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I D+C C +C CP AI Sbjct: 322 QYEIVADKCKGCTLCARNCPAGAI 345 >gi|330506892|ref|YP_004383320.1| sulfite reductase subunit beta [Methanosaeta concilii GP-6] gi|328927700|gb|AEB67502.1| sulfite reductase, beta subunit [Methanosaeta concilii GP-6] Length = 286 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C CVEVC V E I D+C+ CG C CP A Sbjct: 167 EKCTGCG--KCVEVCKVGATKIVEEKAIIDYDKCVRCGRCVAVCPEAA 212 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 14/87 (16%) Query: 17 CVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 C C F E G I ++C CG C C V A K E + + K Sbjct: 142 CAFPCTRPQFNEIGLMGRVLPQIDLEKCTGCGKCVEVCKVGATKIVEEKAIIDYDKC--- 198 Query: 73 YATQWPNITTKKESL-PSAAKMDGVKQ 98 + ++ P AAK K Sbjct: 199 ------VRCGRCVAVCPEAAKYSAEKG 219 >gi|328953055|ref|YP_004370389.1| NADH dehydrogenase (quinone) [Desulfobacca acetoxidans DSM 11109] gi|328453379|gb|AEB09208.1| NADH dehydrogenase (quinone) [Desulfobacca acetoxidans DSM 11109] Length = 617 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKP 57 +TY + C C CV CPV G I+ D CI CG+C C DA+K Sbjct: 560 LTYTIDPNECTSCL--ACVRECPVGAIS-GPKKEPQVINQDLCIKCGLCHDVCQFDAVKV 616 Query: 58 D 58 + Sbjct: 617 E 617 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 14/31 (45%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P+EC C C ECPV AI + Sbjct: 562 YTIDPNECTSCLACVRECPVGAISGPKKEPQ 592 >gi|256830011|ref|YP_003158739.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579187|gb|ACU90323.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 185 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 C C++ C+ VCPV+ + + E+ + +H ++CI CG C CP A Sbjct: 58 ACNHCENPTCLNVCPVEAYTKREDGVVVHHQEKCIGCGNCIRSCPYGAPVY 108 >gi|212637708|ref|YP_002314233.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212559192|gb|ACJ31646.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 559 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V +E C ++ + C+ CP D E + I P C G C CP AI D Sbjct: 181 VNSEICAHSRNGNEGCNRCLNFCPADAIASVEKKIEIDPYLCHGAGSCTNACPTGAISYD 240 Query: 59 TEPGLELWLKIN 70 + +N Sbjct: 241 LPTPQSMHTYLN 252 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 V TE+C LC CV CP +G + A+H +C+ CG+C+ CP I Sbjct: 424 VNTESCTLC--MSCVATCPTGALTDGGDLPALHFVEQDCVQCGLCDAGCPEKVI 475 >gi|168239267|ref|ZP_02664325.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734836|ref|YP_002114400.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710338|gb|ACF89559.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288003|gb|EDY27390.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322615129|gb|EFY12052.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619972|gb|EFY16845.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622283|gb|EFY19128.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627806|gb|EFY24596.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633095|gb|EFY29838.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636659|gb|EFY33362.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641147|gb|EFY37789.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644916|gb|EFY41449.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650245|gb|EFY46659.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655820|gb|EFY52122.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660146|gb|EFY56385.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665288|gb|EFY61476.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669545|gb|EFY65693.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673471|gb|EFY69573.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677399|gb|EFY73463.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679938|gb|EFY75977.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687410|gb|EFY83382.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192363|gb|EFZ77594.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198618|gb|EFZ83719.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203099|gb|EFZ88130.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208664|gb|EFZ93602.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213821|gb|EFZ98599.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217641|gb|EGA02356.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323218989|gb|EGA03499.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223656|gb|EGA07966.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229443|gb|EGA13566.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232666|gb|EGA16762.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240296|gb|EGA24340.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242716|gb|EGA26737.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245927|gb|EGA29915.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252504|gb|EGA36348.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259120|gb|EGA42765.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260073|gb|EGA43698.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267163|gb|EGA50648.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271514|gb|EGA54935.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 244 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|168233577|ref|ZP_02658635.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470968|ref|ZP_03076952.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457332|gb|EDX46171.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332342|gb|EDZ19106.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 244 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|297619598|ref|YP_003707703.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378575|gb|ADI36730.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 173 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C E+CPV+ + ++ + CI CG+C CP AI Sbjct: 45 CQHCASAPCGEICPVNAIDVNNGVVHLNEELCIGCGLCALACPFGAIF 92 >gi|310825956|ref|YP_003958313.1| hypothetical protein ELI_0331 [Eubacterium limosum KIST612] gi|308737690|gb|ADO35350.1| hypothetical protein ELI_0331 [Eubacterium limosum KIST612] Length = 139 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +TE CI C T C CPV E + ++ CIDCGVC CP AI Sbjct: 1 MAYTITEKCIGC--TICARNCPVMAITGEKKKQHVVNDKRCIDCGVCGRSCPQAAI 54 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 9/52 (17%) Query: 17 CVEVCPVDCF------YEGENFLAIH---PDECIDCGVCEPECPVDAIKPDT 59 CV+ C C ++G+ + P C+ CG+CE CP+ AI+ + Sbjct: 86 CVDGCRFGCLAISMPAFKGDIRVYADLVKPKACVGCGLCESLCPLSAIRMEV 137 >gi|295100160|emb|CBK89249.1| glycyl-radical enzyme activating protein family [Eubacterium cylindroides T2-87] Length = 300 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C CV CP L D CI C CE CP AI Sbjct: 52 EKCVRCG--TCVRNCPQHAIKIENFKLVFDRDACIHCKTCENNCPAGAI 98 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Query: 21 CPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP+ C E + L + ++C+ CG C CP AIK + Sbjct: 28 CPLRCPWCANPESQEIKPQLMYNEEKCVRCGTCVRNCPQHAIKIE 72 >gi|256826549|ref|YP_003150508.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582692|gb|ACU93826.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 199 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C C+ VCPV+ + ++ CI C +C CP AI P Sbjct: 51 CHHCAGAPCLAVCPVNAITRENGSIQVNEQTCIGCKLCGIVCPFGAIHP 99 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 30 ENFLAIHPDECIDCGVCEPEC 50 F+AI+PD+CI CG C C Sbjct: 2 NRFIAINPDKCIGCGTCRAAC 22 >gi|219852244|ref|YP_002466676.1| nitroreductase [Methanosphaerula palustris E1-9c] gi|219546503|gb|ACL16953.1| nitroreductase [Methanosphaerula palustris E1-9c] Length = 272 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Query: 2 TYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKP 57 T V+ E NC C + C +CP E ++ +I P+ CI CG CE CP A+K Sbjct: 3 TIVIDETNCTHC--STCATICPSGIIEETDSIPSIRPENEGSCIACGQCEATCPTGALKV 60 Query: 58 DTEPGL 63 G Sbjct: 61 QDPDGQ 66 >gi|322659222|gb|EFY55471.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|323243093|gb|EGA27113.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] Length = 142 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSA 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|319942524|ref|ZP_08016834.1| hypothetical protein HMPREF9464_02053 [Sutterella wadsworthensis 3_1_45B] gi|319803927|gb|EFW00845.1| hypothetical protein HMPREF9464_02053 [Sutterella wadsworthensis 3_1_45B] Length = 211 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C C+ VCPV + G + +CI C +CE CP A K + + Sbjct: 55 SCMHCDKPACMPVCPVKAIHRGPAGEVLVDQKKCIGCRMCERACPYGAPKFNASGETNYF 114 >gi|258405501|ref|YP_003198243.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfohalobium retbaense DSM 5692] gi|257797728|gb|ACV68665.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfohalobium retbaense DSM 5692] Length = 793 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYE----GENF-LAIHPDECIDCGVCEPECP 51 C C C+E+CP GE+F + P++CI CG C CP Sbjct: 734 ACRDCGL--CIEICPQTAINRRQLSGEDFEMVADPEKCIGCGFCAQACP 780 >gi|159027686|emb|CAO89551.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 74 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEG-------ENFLAIHPDECIDCGVCEPECPV 52 M + +VT C DCV CPV C + G ++ I CIDCG+C CPV Sbjct: 1 MPHSIVTGICEGV--ADCVSACPVACIHPGLGKNVKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI P+ P L+ Sbjct: 59 EGAILPEERPDLQK 72 >gi|158520577|ref|YP_001528447.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] gi|158509403|gb|ABW66370.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] Length = 589 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 8/69 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-----PDT 59 VT+ C+ C CVE C EN A+H D+C CG CE CP A++ P+ Sbjct: 514 VTDACVGCG--TCVEFCGFGAITI-ENGKAVHNDQCRGCGRCETRCPNHAVRITINNPNV 570 Query: 60 EPGLELWLK 68 ++ ++ Sbjct: 571 TEDVKKRIE 579 >gi|20089906|ref|NP_615981.1| hypothetical protein MA1031 [Methanosarcina acetivorans C2A] gi|19914861|gb|AAM04461.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 377 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ T NC LCK CV C V E + L I+ ++CI C C CP DA++ Sbjct: 310 PFINTSNCKLCK--ACVLNCSVHAIEETGSALKINQEKCIQCYCCRELCPSDAVE 362 >gi|307611754|emb|CBX01462.1| hypothetical protein LPW_31501 [Legionella pneumophila 130b] Length = 204 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + I EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 79 IKEDECIGCTKCIKACPVDAI 99 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M ++T C C CV+ CPVDC Sbjct: 106 MHAIITHECTGCGL--CVDPCPVDCIEM 131 >gi|283832974|ref|ZP_06352715.1| putative polyferredoxin [Citrobacter youngae ATCC 29220] gi|291071581|gb|EFE09690.1| putative polyferredoxin [Citrobacter youngae ATCC 29220] Length = 290 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CV +CPV+ I+ DECI CG C CPVDA++ + +P + Sbjct: 29 QACVSICPVNAISLSPAGPEINDDECIRCGNCLFACPVDALQ-NLQPATRKY 79 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 T C+LC C CP + + C C CE CPV +I PG + Sbjct: 192 TLQCMLCG--ACSRACPEEAICFTDGAFEFSSSICTGCLSCEAVCPVQSIYIKRLPGEK 248 >gi|62179976|ref|YP_216393.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614201|ref|YP_001588166.1| hypothetical protein SPAB_01943 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551649|ref|ZP_02345403.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995015|ref|ZP_02576105.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240895|ref|ZP_02665827.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168463207|ref|ZP_02697138.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194447767|ref|YP_002045390.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198245067|ref|YP_002215743.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389577|ref|ZP_03216188.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213161804|ref|ZP_03347514.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428559|ref|ZP_03361309.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583929|ref|ZP_03365755.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647222|ref|ZP_03377275.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854959|ref|ZP_03383199.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827395|ref|ZP_06546007.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|62127609|gb|AAX65312.1| Tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363565|gb|ABX67333.1| hypothetical protein SPAB_01943 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194406071|gb|ACF66290.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195634294|gb|EDX52646.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197939583|gb|ACH76916.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602022|gb|EDZ00568.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323655|gb|EDZ11494.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327218|gb|EDZ13982.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339348|gb|EDZ26112.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|312912370|dbj|BAJ36344.1| tetrathionate reductase complex subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224011|gb|EFX49074.1| Tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714443|gb|EFZ06014.1| tetrathionate reductase complex, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 244 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|330447721|ref|ZP_08311369.1| dimethylsulfoxide reductase, chain B [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491912|dbj|GAA05866.1| dimethylsulfoxide reductase, chain B [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 205 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y V+ C C C +VCP ++ + F+ + ++CI C C CP A + + Sbjct: 59 SYYVSIACNHCTKPACTKVCPSGAMHKRKEDGFVVVDTEKCIGCQYCGMACPYGAPQYNA 118 Query: 60 EPGL 63 E G Sbjct: 119 EKGH 122 >gi|326624573|gb|EGE30918.1| protein AegA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 162 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 39 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 91 >gi|320161182|ref|YP_004174406.1| NAD-reducing hydrogenase subunit [Anaerolinea thermophila UNI-1] gi|319995035|dbj|BAJ63806.1| NAD-reducing hydrogenase subunit [Anaerolinea thermophila UNI-1] Length = 594 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 2 TY-VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 TY +V E C C T C CPV+ I PD C+ CG+C C +AI Sbjct: 538 TYEIVPETCTGC--TVCARNCPVNAITGERRQPHKIDPDICVRCGICMQVCNFNAI 591 Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 17/37 (45%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 I P+ C C VC CPV+AI + ++ I Sbjct: 539 YEIVPETCTGCTVCARNCPVNAITGERRQPHKIDPDI 575 >gi|297559006|ref|YP_003677980.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843454|gb|ADH65474.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 294 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C C++VCP + E + + D C CG C P CP I E G Sbjct: 115 SDVCKHCTSAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDKREEDG 172 >gi|322420686|ref|YP_004199909.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320127073|gb|ADW14633.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 260 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ + + + + CI CG C CP Sbjct: 126 AFFVPKLCNQCDNPPCVQVCPVGATYQTADGVVLVDREWCIGCGYCIMGCPYG 178 >gi|78044396|ref|YP_359648.1| formate dehydrogenase-O, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996511|gb|ABB15410.1| formate dehydrogenase-O, iron-sulfur subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 260 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 + C C C + CP D Y + + D CI C C+ CP + + DT+ Sbjct: 70 QQCFHCGDAACEKACPEDAIYHTKEGAVVRDYDRCIGCDYCQRACPFNIPRIDTQ 124 >gi|298244772|ref|ZP_06968578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297552253|gb|EFH86118.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ktedonobacter racemifer DSM 44963] Length = 263 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C+E CP E + + PD C CG C P CP + Sbjct: 76 SDVCKHCTHAGCMEACPTGAIVRNEFGDVYVQPDICNGCGYCVPSCPFGVV 126 >gi|257064870|ref|YP_003144542.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792523|gb|ACV23193.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 296 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKP 57 C+ C CV+VCP ++ E ++ + D+CI C C CP D + Sbjct: 79 ACMHCTDAGCVQVCPSGALFKDEETGLVSYNKDKCIGCKYCAAACPFDVPRH 130 >gi|304438798|ref|ZP_07398725.1| electron transport complex protein RnfB [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372721|gb|EFM26300.1| electron transport complex protein RnfB [Peptoniphilus duerdenii ATCC BAA-1640] Length = 315 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C + CP D + +N AI +CI+CG+C CP AI + Sbjct: 225 CIGCG--ICEKKCPKDAIHVTDNLAAIDYTKCINCGICVANCPTGAIFCEYPE 275 >gi|302392632|ref|YP_003828452.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] gi|302204709|gb|ADL13387.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Acetohalobium arabaticum DSM 5501] Length = 600 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 E C C C E CPV E I P+ C CG+CE ECP + I Sbjct: 550 EACEACGV--CKEECPVSAITGSKEEGYEIDPEICESCGICEEECPFEVI 597 Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 20/35 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 I + C CGVC+ ECPV AI E G E+ +I Sbjct: 547 IDEEACEACGVCKEECPVSAITGSKEEGYEIDPEI 581 >gi|261885847|ref|ZP_06009886.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 216 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ C C C VCP ++ +H CI C +C CP AI D+ Sbjct: 49 VMPNQCRQCDDAPCALVCPSSALRNENGYVEMHEQLCIGCALCVNACPYGAIHLDS 104 >gi|238762337|ref|ZP_04623308.1| Hydrogenase-2 operon protein hybA [Yersinia kristensenii ATCC 33638] gi|238699322|gb|EEP92068.1| Hydrogenase-2 operon protein hybA [Yersinia kristensenii ATCC 33638] Length = 329 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + +PD C C C CP + K D Sbjct: 100 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYNPDVCTGCRYCMVGCPFNVPKYD 155 >gi|171463232|ref|YP_001797345.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192770|gb|ACB43731.1| electron transport complex, RnfABCDGE type, B subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 228 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT- 59 ++ + CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 88 AFIDPKKCIGC--TLCIQACPVDAIVGASKQMHVVLSDWCTGCNLCIPPCPVDCISMIDV 145 Query: 60 ---EPGLELWLKINSEYATQWPNITTKK 84 + G + W + +++A + + K+ Sbjct: 146 TGGQTGWDAWSQDLADFARKRYHNREKR 173 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 24 DCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +C E + I P +CI C +C CPVDAI Sbjct: 78 ECGLERPRAVAFIDPKKCIGCTLCIQACPVDAI 110 >gi|163858290|ref|YP_001632588.1| ferredoxin-like protein in nif region [Bordetella petrii DSM 12804] gi|163262018|emb|CAP44320.1| Ferredoxin-like protein in nif region [Bordetella petrii] Length = 83 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +TE CI C C CP + G + I PD C +C C+ CPV+ Sbjct: 1 MALTITEECINCDV--CEPQCPNEAISMGPEYYVIDPDRCTECVGHHDEPQCKVVCPVEC 58 Query: 55 IK 56 I+ Sbjct: 59 IE 60 >gi|91773531|ref|YP_566223.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanococcoides burtonii DSM 6242] gi|91712546|gb|ABE52473.1| 4Fe-4S ferredoxin, iron-sulfur protein [Methanococcoides burtonii DSM 6242] Length = 58 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C+ C CV+ CP + +GEN ++ DECIDCG C CP DAI + Sbjct: 8 DECVGCG--TCVDDCPSEAISMDGENIAVVNADECIDCGACVDSCPTDAISME 58 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I+ DEC+ CG C +CP +AI D E Sbjct: 4 VINRDECVGCGTCVDDCPSEAISMDGE 30 >gi|77360047|ref|YP_339622.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis TAC125] gi|76874958|emb|CAI86179.1| Electron transport complex protein rnfB [Pseudoalteromonas haloplanktis TAC125] Length = 184 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--KPD 58 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I P Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCIDMLPV 164 Query: 59 TEPGLELWLKINS 71 E ++N+ Sbjct: 165 AETKQNWKWQLNA 177 >gi|110634782|ref|YP_674990.1| 4Fe-4S ferredoxin, iron-sulfur binding [Mesorhizobium sp. BNC1] gi|110285766|gb|ABG63825.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chelativorans sp. BNC1] Length = 680 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T C+++CP N +AI + C CG C CP A Sbjct: 288 TRCLDLCPTGAITPAGNHVAIDAEICAGCGNCAAVCPTGAAAYAIPDAE 336 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC CV CP + E+ L C+ CG+C CP I + Sbjct: 519 VDVEGCTLCL--SCVSACPTGALSDSEDRPALYFSESACVQCGLCAATCPEQVITLVPQV 576 Query: 62 GLELW 66 + W Sbjct: 577 DFQAW 581 >gi|323700004|ref|ZP_08111916.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio sp. ND132] gi|323459936|gb|EGB15801.1| Fe-S-cluster-containing hydrogenase components 1-like [Desulfovibrio desulfuricans ND132] Length = 249 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 C+ C++ CV CP Y+ + I CI CG C P CP DA Sbjct: 61 ACMHCENPTCVTACPTGATYKDPETGVVVIDETLCIGCGNCIPACPYDA 109 >gi|255261730|ref|ZP_05341072.1| 4Fe-4S binding domain protein [Thalassiobium sp. R2A62] gi|255104065|gb|EET46739.1| 4Fe-4S binding domain protein [Thalassiobium sp. R2A62] Length = 252 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D E G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQEEG 137 >gi|157375933|ref|YP_001474533.1| aspartate carbamoyltransferase [Shewanella sediminis HAW-EB3] gi|157318307|gb|ABV37405.1| aspartate carbamoyltransferase [Shewanella sediminis HAW-EB3] Length = 686 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE-GENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 ++ C C C++ CP + + E + P+ C CG C CP +A + D Sbjct: 160 ISMACNHCDDPVCLKGCPTRAYTKHAEYGAVLQDPETCFGCGYCTWVCPYNAPQLD 215 >gi|86609930|ref|YP_478692.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558472|gb|ABD03429.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 75 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCVE CPV C + G+ ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTDICEGV--ADCVEACPVACIHPGDTKNAKGTDYFWIEFSTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI P+ +P L+ Sbjct: 59 EGAILPEEKPHLQ 71 >gi|84385415|ref|ZP_00988447.1| tetrathionate reductase, subunit B [Vibrio splendidus 12B01] gi|84380012|gb|EAP96863.1| tetrathionate reductase, subunit B [Vibrio splendidus 12B01] Length = 278 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + C++VCPV ++ E+ + + + C+ C C CP DA Sbjct: 112 CNHCDNAPCIKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 158 >gi|226329169|ref|ZP_03804687.1| hypothetical protein PROPEN_03072 [Proteus penneri ATCC 35198] gi|225202355|gb|EEG84709.1| hypothetical protein PROPEN_03072 [Proteus penneri ATCC 35198] Length = 337 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + + C+ C +CV VCPV + + H D C C C CP + K D + Sbjct: 113 FIKKQCMHCVDANCVSVCPVSALTKDPKTGIVHYHADICTGCRYCMVGCPYNIPKYDYDD 172 Query: 62 GL 63 Sbjct: 173 PF 174 >gi|213861424|ref|ZP_03385894.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 133 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|297619597|ref|YP_003707702.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378574|gb|ADI36729.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 139 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C++VCP + + + + + D+CI C +C CP+ AI+ D Sbjct: 35 CMHCESAPCIQVCPENALKKVGDRVILDNDKCIGCSLCTEVCPIGAIRID 84 >gi|147677713|ref|YP_001211928.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] gi|146273810|dbj|BAF59559.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] Length = 650 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 V E CI C C + C V Y I P++C+ C C CP +AI Sbjct: 571 VDEERCIACGL--CAKACTVQAIYGEPKKPYRIDPEKCVKCAACVARCPRNAI 621 Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + + CI CG+C C V AI + + Sbjct: 571 VDEERCIACGLCAKACTVQAIYGEPKKPYR 600 >gi|146303970|ref|YP_001191286.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Metallosphaera sedula DSM 5348] gi|145702220|gb|ABP95362.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Metallosphaera sedula DSM 5348] Length = 362 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV-DAIKPDTEPGLE 64 + CI C C CP CF + I D C+ CG+C CPV + I E L Sbjct: 267 DACIKCDL--CWVYCPDGCFDKTPEGYYDIAYDYCVGCGICAEVCPVKNCIVMVDEKRLP 324 Query: 65 LWL------KINSEYATQW 77 + K N +W Sbjct: 325 DYTRPYSMWKANKAEYKKW 343 >gi|73540750|ref|YP_295270.1| ferredoxin [Ralstonia eutropha JMP134] gi|72118163|gb|AAZ60426.1| Electron transport complex, RnfABCDGE type, B subunit [Ralstonia eutropha JMP134] Length = 248 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP----DTEPGL 63 CI C T C++ CPVD + I P+ C C +C P CPVD I G Sbjct: 87 CIGC--TLCIQACPVDAIAGAAKQMHTIIPELCTGCDLCVPPCPVDCIDMVPVTGERTGW 144 Query: 64 ELWLKINSEYA 74 + W + ++ A Sbjct: 145 DAWTQEQADAA 155 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 82 IDESLCIGCTLCIQACPVDAI 102 >gi|312897705|ref|ZP_07757122.1| 4Fe-4S binding domain protein [Megasphaera micronuciformis F0359] gi|310621338|gb|EFQ04881.1| 4Fe-4S binding domain protein [Megasphaera micronuciformis F0359] Length = 175 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C+E CP + GE+ + + D C CG C CP D I Sbjct: 59 CRQCPKPKCMEACPFNAISMGEDSVILDQDICKGCGKCAKACPFDGI 105 >gi|307720609|ref|YP_003891749.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978702|gb|ADN08737.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 83 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ + CI C C E CP EG+ I PD C +C C CPVD Sbjct: 1 MALIINDECIACD--ACREECPTLAIEEGDPIYYIDPDRCTECVGIYDEPACISVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDKD 64 >gi|149908584|ref|ZP_01897246.1| tetrathionate reductase, subunit B [Moritella sp. PE36] gi|149808418|gb|EDM68355.1| tetrathionate reductase, subunit B [Moritella sp. PE36] Length = 257 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV+VCPV ++ E+ + + + C+ C C CP DA Sbjct: 111 CNHCENPPCVKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 157 >gi|78067137|ref|YP_369906.1| ferredoxin [Burkholderia sp. 383] gi|77967882|gb|ABB09262.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. 383] Length = 334 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 112 AFIDESLCIGC--TLCMQACPVDAIVGAPKQMHTIIESLCTGCDLCVPPCPVDCIAMLPV 169 Query: 59 --TEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 170 TGERTGWDAWSQEQADAARE 189 >gi|34558205|ref|NP_908020.1| ferredoxin [Wolinella succinogenes DSM 1740] gi|34483924|emb|CAE10920.1| FERREDOXIN [Wolinella succinogenes] Length = 83 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++TE CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLMITEECIACD--ACREECPNEAIDEGDPTYMIDPDRCTECVGYYDEPSCVGACPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDPD 64 >gi|16082047|ref|NP_394472.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit related protein [Thermoplasma acidophilum DSM 1728] gi|10640327|emb|CAC12141.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit related protein [Thermoplasma acidophilum] Length = 605 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 10/74 (13%) Query: 2 TYVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KP 57 YV + C C T C + CP N A D CI CG C CP +AI K Sbjct: 538 AYVDSNRCTGC--TICYDFFTCP--SILPLSNKKATIDDSCIGCGACVEVCPFNAISVKG 593 Query: 58 DTEPGLELWLKINS 71 + G E N+ Sbjct: 594 EKPAGWEE--AWNA 605 >gi|193214169|ref|YP_001995368.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087646|gb|ACF12921.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 81 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +TE+CI C CV+ CP + E+ AI+PD C +C C CP +A Sbjct: 1 MALYITEDCISCGV--CVDECPNNAIDYAESGYAINPDLCTECVGDFDAPQCMENCPSEA 58 Query: 55 IKPD 58 I+PD Sbjct: 59 IQPD 62 >gi|218780883|ref|YP_002432201.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762267|gb|ACL04733.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 354 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E+C C+ C+E C + ++ I+ D CI CG+C CP +AI Sbjct: 277 EDCTGCE--TCLERCQMGAIDMKDDVAQINLDRCIGCGLCVTTCPTEAI 323 >gi|20094162|ref|NP_614009.1| Fe-S-cluster-containing hydrogenase component [Methanopyrus kandleri AV19] gi|19887178|gb|AAM01939.1| Fe-S-cluster-containing hydrogenase component [Methanopyrus kandleri AV19] Length = 167 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C VCPV+ E + + D C+ CG+C CP AI+ Sbjct: 45 CLQCDDAPCANVCPVNAIVEEGDSWIVTED-CVGCGLCAVACPFGAIE 91 >gi|307130305|ref|YP_003882321.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Dickeya dadantii 3937] gi|306527834|gb|ADM97764.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Dickeya dadantii 3937] Length = 180 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIQCRHCEDAPCANVCPNGAIVHAGDHIRVQQEKCIGCKTCVVACPYGA 102 >gi|260576503|ref|ZP_05844492.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259021226|gb|EEW24533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 245 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ CI CG+C CP A + D G Sbjct: 81 SCLHCQDAPCVPVCPTGASYKRAEDGIVLVNAAACIGCGLCAWACPYGARELDAAAG 137 >gi|213650841|ref|ZP_03380894.1| anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 154 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|150377591|ref|YP_001314186.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150032138|gb|ABR64253.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sinorhizobium medicae WSM419] Length = 679 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + C LC CV CP + E L C+ CG+C CP AI + Sbjct: 519 VNVDACTLCL--SCVSACPTGALSDSEERPALYFAESACVQCGLCAATCPEKAIALVPQL 576 Query: 62 GLELW 66 + W Sbjct: 577 DFQAW 581 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 13/34 (38%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP 48 T C+ +CP + + I C CG C Sbjct: 288 TRCINLCPTGAIVPAGDHVVIDAHVCAGCGSCAA 321 >gi|312881025|ref|ZP_07740825.1| Fe-S cluster domain protein [Aminomonas paucivorans DSM 12260] gi|310784316|gb|EFQ24714.1| Fe-S cluster domain protein [Aminomonas paucivorans DSM 12260] Length = 576 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 Y T NC C C+ CPV E + P+ C+ CG+C CP A I+ D Sbjct: 8 YTQTNNCHDC--FKCLRQCPVKAIRLEEGHARVLPELCVSCGLCVEVCPAKAKCIRDD 63 >gi|300692030|ref|YP_003753025.1| 4Fe-4S ferredoxin, iron-sulphur binding [Ralstonia solanacearum PSI07] gi|299079090|emb|CBJ51752.2| 4Fe-4S ferredoxin, iron-sulphur binding [Ralstonia solanacearum PSI07] Length = 268 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP----DTEP 61 E CI C T C++ CPVD + D C C +C CPVD I Sbjct: 88 ERCIGC--TLCIQACPVDAIVGAPKAMHVVLEDWCTGCDLCVAPCPVDCIDMVSVTGERT 145 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 146 GWDAWSQAQADLAR 159 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 84 VIDPERCIGCTLCIQACPVDAI 105 >gi|291278907|ref|YP_003495742.1| electron transport complex protein RnfB [Deferribacter desulfuricans SSM1] gi|290753609|dbj|BAI79986.1| electron transport complex protein RnfB [Deferribacter desulfuricans SSM1] Length = 260 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CP D N IH ++CI+CG CE CP AI Sbjct: 213 CIGC--RLCAKNCPEDAITVENNLAYIHAEKCINCGKCEEVCPTKAI 257 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 9 CI-LC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CI C CV+ C D G+N + + ++C CG+C CP + I+ Sbjct: 134 CIYGCVGGGSCVKACNFDALKMGDNGIPVVDEEKCTACGLCVKACPRNLIE 184 >gi|51245676|ref|YP_065560.1| pyruvate formate-lyase activating enzyme [Desulfotalea psychrophila LSv54] gi|50876713|emb|CAG36553.1| related to pyruvate formate-lyase activating enzyme [Desulfotalea psychrophila LSv54] Length = 310 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEVCPVD--CFYEGENFLAIH-PDECIDCGVCEPECPVDA 54 + CI C CV VCPV G I+ ECI CG CE C A Sbjct: 55 DRCIDCGD--CVPVCPVGIHRLLPGSKKHEINQKIECIGCGKCEAACKQGA 103 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 D CIDCG C P CPV I + +IN Sbjct: 55 DRCIDCGDCVPVCPVG-IHRLLPGSKKH--EIN 84 >gi|238796067|ref|ZP_04639578.1| hypothetical protein ymoll0001_4030 [Yersinia mollaretii ATCC 43969] gi|238720012|gb|EEQ11817.1| hypothetical protein ymoll0001_4030 [Yersinia mollaretii ATCC 43969] Length = 693 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 68 CHHCEDAPCASTCPNGAIVEMNNSIQVIQEKCIGCKTCMIACPFG 112 >gi|332295968|ref|YP_004437891.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179071|gb|AEE14760.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermodesulfobium narugense DSM 14796] Length = 259 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C CV+ CP ++ EN + ++CI CG C CP Sbjct: 73 CFHCGEPACVKACPSGALFQAENGIVAFDVNKCIACGYCHSACPFG 118 >gi|320086134|emb|CBY95908.1| Uncharacterized ferredoxin-like protein ydhX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 244 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|170077855|ref|YP_001734493.1| ferredoxin-like protein [Synechococcus sp. PCC 7002] gi|169885524|gb|ACA99237.1| ferredoxin-like protein [Synechococcus sp. PCC 7002] Length = 74 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCVE CPV C ++G ++ I D CIDCG+C CPV Sbjct: 1 MPHSIVTDVCEGI--ADCVEACPVACIHDGPGKNAKGTDWYWIDFDVCIDCGICIQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI P+ L+ Sbjct: 59 EGAIIPEENATLQ 71 >gi|24375838|ref|NP_719881.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] gi|24350797|gb|AAN57325.1|AE015869_1 anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] Length = 205 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y ++ +C C + CV+ CP Y E L ++ D CI C C CP DA + D Sbjct: 63 AYYISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQID 121 >gi|51244332|ref|YP_064216.1| iron-sulfur center hydrogenase [Desulfotalea psychrophila LSv54] gi|50875369|emb|CAG35209.1| related to iron-sulfur center hydrogenase [Desulfotalea psychrophila LSv54] Length = 202 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV + C C+ C VC V+ + + + + ++C+ C C CP A++ Sbjct: 60 AYVPVQ-CRHCEDAPCANVCQVEAISQRDGVIFVDEEKCMGCKTCMLACPFGAME 113 >gi|152965569|ref|YP_001361353.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] gi|151360086|gb|ABS03089.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kineococcus radiotolerans SRS30216] Length = 376 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C C H C++VCP + E + + D C CG C CP I Sbjct: 200 CKHCTHAACLDVCPTGALFRTEFGTVVVQQDVCNGCGYCVSACPYGVI 247 >gi|157370673|ref|YP_001478662.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Serratia proteamaculans 568] gi|157322437|gb|ABV41534.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Serratia proteamaculans 568] Length = 204 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 30/78 (38%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ ++ + ++ CI C +C CP AI L + Sbjct: 51 CHQCEDAPCAQVCPVNAIRHQDDAIVLNESLCISCKLCGIACPFGAIGFGGSTPLAIPAD 110 Query: 69 INSEYATQWPNITTKKES 86 N+ A P Sbjct: 111 CNTSLALPAPKAPRPISP 128 >gi|94265631|ref|ZP_01289373.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93453841|gb|EAT04204.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 291 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCPV+ + + D+CI C C CP + D + Sbjct: 100 CQHCRKPACARVCPVNAISRLPEGPVVVVEDKCIGCRYCYQACPFSVPELDFDE 153 >gi|54295706|ref|YP_128121.1| hypothetical protein lpl2794 [Legionella pneumophila str. Lens] gi|53755538|emb|CAH17037.1| hypothetical protein lpl2794 [Legionella pneumophila str. Lens] Length = 204 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + I EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 79 IKEDECIGCTKCIKACPVDAI 99 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M ++T C C CV+ CPVDC Sbjct: 106 MHAIITHECTGCGL--CVDPCPVDCIEM 131 >gi|158520140|ref|YP_001528010.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508966|gb|ABW65933.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 325 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M V E C C CV CPV E+ + I C+ CG+C +CP +A++ Sbjct: 205 MPVVKKEACKKCMD--CVNRCPVKAISHQEDTITIDMGLCLGCGICTEKCPHEAME 258 >gi|57641578|ref|YP_184056.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus kodakarensis KOD1] gi|57159902|dbj|BAD85832.1| indolepyruvate: ferredoxin oxidoreductase, alpha subunit [Thermococcus kodakarensis KOD1] Length = 637 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + V+ + C CK + CP + + I C CGVC CP DAIK +E Sbjct: 573 LPVVIEDKCTGCKACILLTGCPALVYDPETKKVRIDELLCTGCGVCNQTCPFDAIKFPSE 632 >gi|186681639|ref|YP_001864835.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nostoc punctiforme PCC 73102] gi|186464091|gb|ACC79892.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nostoc punctiforme PCC 73102] Length = 74 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DCV+ CPV C ++G ++ I CIDCG+C CPV Sbjct: 1 MPHTIVTEVCEGV--ADCVDACPVACIHDGPGKNAKGTDWYWIDFATCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + P L+ Sbjct: 59 EGAILAEERPELQK 72 >gi|257065418|ref|YP_003145090.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256793071|gb|ACV23741.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 414 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V TE C+ ++ CVE C + L +HP +CI CG C CP AI+ Sbjct: 21 VHTERCVTVRNRHAACLRCVEACTSGAIIYEDGELQVHPKKCIGCGTCATACPTSAIE 78 Score = 40.9 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 T+ C C C CP + E + + H C+ C +CE CP AI ++ Sbjct: 312 TDACTSC--RMCTVFCPTGALFRVDEDDTWGVAHRASACVQCRLCENLCPQHAIHVKSDV 369 Query: 62 GLELWL 67 ++ Sbjct: 370 PARQFM 375 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 11/29 (37%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D C C +C CP A+ E Sbjct: 309 VIDTDACTSCRMCTVFCPTGALFRVDEDD 337 >gi|226329122|ref|ZP_03804640.1| hypothetical protein PROPEN_03025 [Proteus penneri ATCC 35198] gi|225202308|gb|EEG84662.1| hypothetical protein PROPEN_03025 [Proteus penneri ATCC 35198] Length = 209 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T+ C CK +C++VCPV E F + + CI C C CP Sbjct: 121 TDTCRQCKDPECMKVCPVKAIRYQEEFGCIVVDTRRCIGCAACTTACP 168 >gi|90578855|ref|ZP_01234665.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] gi|90439688|gb|EAS64869.1| anaerobic dimethyl sulfoxide reductase, subunit B [Vibrio angustum S14] Length = 215 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C H +C +VCP + E + + ++ D CI C C CP + Sbjct: 68 AYYLSISCNHCTHPECTKVCPSGAMHKREEDGLVVVNEDVCIGCKYCHMACPYGEPQYSE 127 Query: 60 EPGL 63 E G Sbjct: 128 EKGH 131 >gi|302392555|ref|YP_003828375.1| electron transfer flavoprotein alpha/beta-subunit [Acetohalobium arabaticum DSM 5501] gi|302204632|gb|ADL13310.1| Electron transfer flavoprotein alpha/beta-subunit [Acetohalobium arabaticum DSM 5501] Length = 399 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 NC LC+ +C+E CP D ++ + I+ C CG+C CP I+P + Sbjct: 10 NCTLCE--ECIEACPFDAIEIVDDKVEINA-ACKACGICVDTCPEGVIQPVEDE 60 >gi|294677802|ref|YP_003578417.1| dimethyl sulfoxide reductase subunit B [Rhodobacter capsulatus SB 1003] gi|294476622|gb|ADE86010.1| dimethyl sulfoxide reductase, B subunit [Rhodobacter capsulatus SB 1003] Length = 238 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C+ C++ CV VCP + + L I C+ CG+C CP A + D Sbjct: 78 CVHCENPPCVPVCPTGASQQTADGLVQIDASRCLGCGLCAWACPYGARELD 128 >gi|294102514|ref|YP_003554372.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Aminobacterium colombiense DSM 12261] gi|293617494|gb|ADE57648.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Aminobacterium colombiense DSM 12261] Length = 622 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI CK C+ CP F E I C+ CGVC CP AI Sbjct: 565 VDPEKCIGCKF--CINFFNCPGLVFDEAGKKAYIDERFCVSCGVCSKVCPHGAI 616 >gi|197283947|ref|YP_002149819.1| hydrogenase 2 protein HybA [Proteus mirabilis HI4320] gi|227358181|ref|ZP_03842522.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] gi|194681434|emb|CAR40272.1| hydrogenase-2 4fe-4s subunit [Proteus mirabilis HI4320] gi|227161517|gb|EEI46554.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] Length = 337 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + + C+ C +CV VCPV + + H D C C C CP + K D + Sbjct: 113 FIKKQCMHCVDANCVSVCPVSALTKDPKTGIVHYHADICTGCRYCMVGCPYNIPKYDYDD 172 Query: 62 GL 63 Sbjct: 173 PF 174 >gi|162419562|ref|YP_001605308.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis Angola] gi|167400476|ref|ZP_02305985.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|162352377|gb|ABX86325.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis Angola] gi|167049844|gb|EDR61252.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 652 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 37 CHHCEDAPCASTCPNGAIVELNNRVQVIQEKCIGCKTCMIACPFG 81 >gi|197118561|ref|YP_002138988.1| iron-sulfur cluster-binding hydrogenase protein [Geobacter bemidjiensis Bem] gi|197087921|gb|ACH39192.1| iron-sulfur cluster-binding hydrogenase protein [Geobacter bemidjiensis Bem] Length = 264 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C+ C+E CP E + + PD C CG C CP I Sbjct: 79 SDVCKHCERAGCLEACPTGAIVRTEFESVYVQPDVCNGCGYCVVCCPFGVI 129 >gi|238790208|ref|ZP_04633984.1| Electron transport complex protein rnfB [Yersinia frederiksenii ATCC 33641] gi|238721746|gb|EEQ13410.1| Electron transport complex protein rnfB [Yersinia frederiksenii ATCC 33641] Length = 207 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|332981823|ref|YP_004463264.1| Fe-S cluster domain-containing protein [Mahella australiensis 50-1 BON] gi|332699501|gb|AEE96442.1| Fe-S cluster domain protein [Mahella australiensis 50-1 BON] Length = 434 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C C T+C++ CP + I + CIDCG C CP A T+P Sbjct: 14 EKCRGC--TNCIKRCPTEAIRVRAGKANITAERCIDCGECIRVCPYHAKLAVTDP 66 >gi|329910059|ref|ZP_08275218.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Oxalobacteraceae bacterium IMCC9480] gi|327546284|gb|EGF31313.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Oxalobacteraceae bacterium IMCC9480] Length = 242 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD---TEPGLE 64 CI C T C++ CPVD + I D C C +C CPVD I T G + Sbjct: 102 CIGC--TLCIQACPVDAILGAPKQMHTILADLCTGCDLCVAPCPVDCIAMVAVTTTTGWQ 159 Query: 65 LWLKINSEYAT 75 W + ++ A Sbjct: 160 AWTEQQADEAR 170 Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 14/34 (41%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 PV I CI C +C CPVDAI Sbjct: 84 PVHGIERPRPVAIIDEALCIGCTLCIQACPVDAI 117 >gi|37526279|ref|NP_929623.1| electron transport complex protein RnfB [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785710|emb|CAE14694.1| Electron transport complex protein RnfB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 210 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ ENCI C T C++ CPVD + I D C C +C CP D I Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIVGATRAMHTIVEDLCTGCDLCVAPCPTDCI 162 >gi|320353396|ref|YP_004194735.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121898|gb|ADW17444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 253 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 18/102 (17%) Query: 8 NCILCKHTDCVEVCPV----DCFYEGENFLA-----IHPDECIDCGVCEPECPVDA---- 54 C+ C + CV CPV ++ L+ I+ ++CI CG C P CP DA Sbjct: 80 PCMQCDNPPCVAACPVKGKDGATWKSTEGLSAGLVMINYEQCIGCGACVPACPYDARTMD 139 Query: 55 ---IKPDTEPGLELWLKINS-EYATQWPNITTKKESLPSAAK 92 + D P ++ + + S EY +WP + K + +A K Sbjct: 140 QGGMHGDGTPAIQKYETMASYEYGKKWPR-SGKNTPVGNARK 180 >gi|317488527|ref|ZP_07947075.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912361|gb|EFV33922.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 258 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C+ C++ +CV VCP + ++ + I D CI CG C CP A Sbjct: 53 ACMHCENPECVSVCPTGASQKLDDGVVIVDYDACITCGYCMSACPYGA 100 >gi|306835751|ref|ZP_07468755.1| 4Fe-4S ferredoxin [Corynebacterium accolens ATCC 49726] gi|304568382|gb|EFM43943.1| 4Fe-4S ferredoxin [Corynebacterium accolens ATCC 49726] Length = 352 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP + E + + D C CG C CP I+ + G Sbjct: 122 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGG 179 >gi|295106207|emb|CBL03750.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 178 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +V C C+ C VCP Y ++ + + P++CI C C CP A Sbjct: 53 IVPTQCQHCEDAPCAAVCPTHATYVTDSGVVLVDPEKCIGCKYCMAACPYQA 104 >gi|170290729|ref|YP_001737545.1| heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] gi|170174809|gb|ACB07862.1| Heterodisulfide reductase, subunit A [Candidatus Korarchaeum cryptofilum OPF8] Length = 656 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 20/77 (25%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE----------------G--ENFLAIHPDECIDCGVC 46 V E C LC C EVCPV E G I P+ C CG C Sbjct: 250 VNERCNLCG--KCEEVCPVSVPDEYEYGIKKRKAIYLPYSGAYPERYVIDPNSCTFCGKC 307 Query: 47 EPECPVDAIKPDTEPGL 63 CPV+AI + + G Sbjct: 308 VEVCPVNAIDLNEKEGE 324 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CV +CP + +G + I P C CG C CP AI+ Sbjct: 587 CSGCG--ICVSICPFNAISMQKREDGTRYSKIDPLLCEGCGTCVAACPSAAIQQ 638 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 16/37 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + +C CG+C CP +AI + KI+ Sbjct: 581 EVDESKCSGCGICVSICPFNAISMQKREDGTRYSKID 617 >gi|56414804|ref|YP_151879.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363732|ref|YP_002143369.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129061|gb|AAV78567.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095209|emb|CAR60760.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 202 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|15644176|ref|NP_229225.1| Fe-hydrogenase, subunit beta [Thermotoga maritima MSB8] gi|4981989|gb|AAD36495.1|AE001794_11 Fe-hydrogenase, subunit beta [Thermotoga maritima MSB8] gi|2865516|gb|AAC02685.1| Fe-hydrogenase beta subunit [Thermotoga maritima MSB8] Length = 626 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C C C CP + E I ++C+ CG+C +CP AI+ Sbjct: 571 YVINPDICKGCGL--CARSCPQNAITGERGKPYTIDQEKCVKCGLCASKCPFKAIE 624 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+PD C CG+C CP +AI + Sbjct: 559 ECPSG-MCTAFKKYVINPDICKGCGLCARSCPQNAITGE 596 >gi|291435505|ref|ZP_06574895.1| 4Fe-4S ferredoxin [Streptomyces ghanaensis ATCC 14672] gi|291338400|gb|EFE65356.1| 4Fe-4S ferredoxin [Streptomyces ghanaensis ATCC 14672] Length = 266 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDTEPG 62 ++ C C H C++VCP + E + + D C CG C P CP I +PD Sbjct: 176 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDQRPDDGRA 235 Query: 63 LE 64 + Sbjct: 236 WK 237 >gi|261342166|ref|ZP_05970024.1| hydrogenase-4 component A [Enterobacter cancerogenus ATCC 35316] gi|288315499|gb|EFC54437.1| hydrogenase-4 component A [Enterobacter cancerogenus ATCC 35316] Length = 202 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ E + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAGVCPVNAITRVEGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|225569031|ref|ZP_03778056.1| hypothetical protein CLOHYLEM_05110 [Clostridium hylemonae DSM 15053] gi|225161830|gb|EEG74449.1| hypothetical protein CLOHYLEM_05110 [Clostridium hylemonae DSM 15053] Length = 595 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CP D + IH D+C+ CG C +C AI + Sbjct: 544 ADKCKGC--TLCARTCPNDAISGAVKEPHVIHQDKCVKCGACMEKCRFGAIYKE 595 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I D+C C +C CP DAI Sbjct: 529 CPAG-VCKALLSYKIDADKCKGCTLCARTCPNDAI 562 >gi|156975236|ref|YP_001446143.1| electron transport complex protein RnfB [Vibrio harveyi ATCC BAA-1116] gi|166225088|sp|A7MVC6|RNFB_VIBHB RecName: Full=Electron transport complex protein rnfB gi|156526830|gb|ABU71916.1| hypothetical protein VIBHAR_02965 [Vibrio harveyi ATCC BAA-1116] Length = 197 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 60 EPGLELWL-KINS 71 E E W K+N+ Sbjct: 165 ETTTESWKWKLNA 177 >gi|152971583|ref|YP_001336692.1| hydrogenase-3, Fe-S subunit (part of FHL complex) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956432|gb|ABR78462.1| hydrogenase-3, Fe-S subunit (part of FHL complex) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 169 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 16 QMCHHCEDAPCATVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEF 66 >gi|325833389|ref|ZP_08165838.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|325485313|gb|EGC87782.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 207 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C + C VCP ++ E L +CI CG C CP A D Sbjct: 59 AYHVSISCNHCNNPVCTRVCPTGAMHKDELGLVWPDATKCIGCGYCTMACPYHAPHIDAR 118 >gi|225574327|ref|ZP_03782937.1| hypothetical protein RUMHYD_02392 [Blautia hydrogenotrophica DSM 10507] gi|225038478|gb|EEG48724.1| hypothetical protein RUMHYD_02392 [Blautia hydrogenotrophica DSM 10507] Length = 433 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C+ C C +VCP+ + + + C+ CGVC C V AI+ + P Sbjct: 301 DKCVGCG--KCAKVCPILAIEMAGDSKKKKAEVDTEICLGCGVCARNCLVKAIEMERRPV 358 Query: 63 L 63 Sbjct: 359 Q 359 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 P+ I D+C+ CG C CP+ AI+ Sbjct: 285 PMQPVATTNYIPKISLDKCVGCGKCAKVCPILAIE 319 >gi|224370438|ref|YP_002604602.1| putative anaerobic dimethyl sulfoxide reductase, chain B (DMSO reductase, iron-sulfur subunit) [Desulfobacterium autotrophicum HRM2] gi|223693155|gb|ACN16438.1| putative anaerobic dimethyl sulfoxide reductase, chain B (DMSO reductase, iron-sulfur subunit) [Desulfobacterium autotrophicum HRM2] Length = 175 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C+ C C EVCPV+ + + + + CI CG C CP + + ++ Sbjct: 66 SCLHCSDPACAEVCPVEAISKQTADGRVRVDTTLCIGCGACAEACPFGVPQFGEDQVMQK 125 >gi|217967301|ref|YP_002352807.1| Fe-S cluster domain protein [Dictyoglomus turgidum DSM 6724] gi|217336400|gb|ACK42193.1| Fe-S cluster domain protein [Dictyoglomus turgidum DSM 6724] Length = 443 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C H C+ CP + I P CIDCG C CP A Sbjct: 14 QRCRGCIH--CIRHCPTEAMRVRNGKSLIIPYRCIDCGECIRVCPYHAPF 61 >gi|89053933|ref|YP_509384.1| 4Fe-4S ferredoxin, iron-sulfur binding [Jannaschia sp. CCS1] gi|88863482|gb|ABD54359.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Jannaschia sp. CCS1] Length = 254 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D + G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGARELDQDEG 143 >gi|325295599|ref|YP_004282113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066047|gb|ADY74054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 58 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + E CI C C VCP + + ++ I P++CIDCG C CP DAI + Sbjct: 1 MAHKIDPELCIGCG--ACASVCPTNAIHPTDDGKYEIVPEDCIDCGACVEVCPTDAISAE 58 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I P+ CI CG C CP +AI P + E Sbjct: 5 IDPELCIGCGACASVCPTNAIHPTDDGKYE 34 >gi|320667607|gb|EFX34522.1| putative polyferredoxin [Escherichia coli O157:H7 str. LSU-61] Length = 284 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CIDC VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIR 64 >gi|297618262|ref|YP_003703421.1| electron transfer flavoprotein alpha/beta-subunit [Syntrophothermus lipocalidus DSM 12680] gi|297146099|gb|ADI02856.1| Electron transfer flavoprotein alpha/beta-subunit [Syntrophothermus lipocalidus DSM 12680] Length = 394 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---KPDTE----- 60 CI C CVE CP N + D C CG C +CPV AI +P+T+ Sbjct: 9 CIGCG--ICVETCPFGSITLVNNVPVV-SDTCTLCGSCAHDCPVGAIVITRPETKAKVAS 65 Query: 61 --PGLELWLKI 69 + +WL+I Sbjct: 66 EAEDVWVWLEI 76 Score = 40.1 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + I CI CG+C CP +I Sbjct: 1 MITIDETLCIGCGICVETCPFGSI 24 >gi|289522156|ref|ZP_06439010.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503992|gb|EFD25156.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 573 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 YVV + C C C CPV C G+ I ++CI CG C CP I Sbjct: 518 YVVDPDKCRKCGL--CARNCPVKCIS-GDRQTPYFIDQEKCIKCGTCMQVCPFGVI 570 Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP + PD+C CG+C CPV I D Sbjct: 507 CPAK-VCPALIKYVVDPDKCRKCGLCARNCPVKCISGD 543 >gi|262198332|ref|YP_003269541.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] gi|262081679|gb|ACY17648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haliangium ochraceum DSM 14365] Length = 739 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%) Query: 9 CILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C CV C D GE + I+ C+ C +C CP AI+ Sbjct: 262 CRTCSDQRCVSGCEYDSIKFDASRGE--VVINEATCVGCTMCAQSCPFHAIE 311 >gi|152990158|ref|YP_001355880.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] gi|151422019|dbj|BAF69523.1| 4Fe-4S ferredoxin [Nitratiruptor sp. SB155-2] Length = 84 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLMITDECIACD--ACREECPTEAIEEGDPIYIIDPDRCTECVGFYDEPACIAVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|116695680|ref|YP_841256.1| sulfite reductase alpha subunit (flavoprotein) [Ralstonia eutropha H16] gi|113530179|emb|CAJ96526.1| sulfite reductase alpha subunit (flavoprotein) [Ralstonia eutropha H16] Length = 383 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPV N + + C C C P CP AI Sbjct: 19 CIRCN--SCEESCPVGAITHDHNNYVVDVERCNHCRACLPPCPTGAI 63 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P CI C CE CPV AI D Sbjct: 14 IDPAICIRCNSCEESCPVGAITHD 37 >gi|134300070|ref|YP_001113566.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052770|gb|ABO50741.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 272 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 NCI CK CV +CP+ + E+ ++ CI CG C CP +A D + L Sbjct: 201 NCIDCKL--CVNLCPMGSI-DYEDVSKLN-GICIKCGACIKNCPTEAKYYDDKDYLRHKH 256 Query: 68 KINSEYATQ 76 ++ ++A++ Sbjct: 257 ELEVDFASR 265 >gi|150018614|ref|YP_001310868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905079|gb|ABR35912.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 189 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C CP + + I+ D CI C C CP AI Sbjct: 59 CRHCENAPCANACPNGSIINKDGVVLINKDTCIGCKSCAIVCPFGAI 105 >gi|320646306|gb|EFX15233.1| putative polyferredoxin [Escherichia coli O157:H- str. 493-89] gi|320651811|gb|EFX20191.1| putative polyferredoxin [Escherichia coli O157:H- str. H 2687] Length = 284 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CIDC VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIR 64 >gi|293604806|ref|ZP_06687203.1| tetrathionate reductase subunit B [Achromobacter piechaudii ATCC 43553] gi|292816634|gb|EFF75718.1| tetrathionate reductase subunit B [Achromobacter piechaudii ATCC 43553] Length = 256 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + + C+ C C CP DA I DT+ + Sbjct: 112 CNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCAYCVQACPYDARFINHDTQTADK 170 >gi|281412804|ref|YP_003346883.1| NADH dehydrogenase (quinone) [Thermotoga naphthophila RKU-10] gi|281373907|gb|ADA67469.1| NADH dehydrogenase (quinone) [Thermotoga naphthophila RKU-10] Length = 626 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C C C CP + E I ++C+ CG+C +CP AI+ Sbjct: 571 YVINPDICKGCGL--CARSCPQNAITGERGKPYTIDQEKCVKCGLCASKCPFKAIE 624 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+PD C CG+C CP +AI + Sbjct: 559 ECPSG-MCTAFKKYVINPDICKGCGLCARSCPQNAITGE 596 >gi|257055934|ref|YP_003133766.1| formate dehydrogenase beta subunit [Saccharomonospora viridis DSM 43017] gi|256585806|gb|ACU96939.1| formate dehydrogenase beta subunit [Saccharomonospora viridis DSM 43017] Length = 337 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 158 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSACPYGVI 208 >gi|237729667|ref|ZP_04560148.1| electron transporter HydN [Citrobacter sp. 30_2] gi|226908273|gb|EEH94191.1| electron transporter HydN [Citrobacter sp. 30_2] Length = 181 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|224368298|ref|YP_002602461.1| HdrA2 [Desulfobacterium autotrophicum HRM2] gi|223691014|gb|ACN14297.1| HdrA2 [Desulfobacterium autotrophicum HRM2] Length = 1017 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E C C C+ VCP + + ++ C CG C CP +A + Sbjct: 949 ERCAGCGG--CIAVCPYNAITMDKVNHVAVVNDALCKGCGACAATCPSEAPSLMGFNNEQ 1006 Query: 65 LWLKINSEYA 74 L+ +I S A Sbjct: 1007 LYAQIKSAMA 1016 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 25/80 (31%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEG---------------ENFLAIHPDECI--- 41 YV T+ CI C C E CP D + EG I P+ C+ Sbjct: 109 YVDTDKCIACGL--CAEKCPKKVDDEYNEGLGKRKAIYVSYSQAVPLKYTIDPENCLYLT 166 Query: 42 --DCGVCEPECPVDAIKPDT 59 CG CE CP AI Sbjct: 167 KGKCGNCEKVCPSHAINYLD 186 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 16/35 (45%) Query: 24 DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 D G I+P+ C CG C CP +AI D Sbjct: 935 DSINIGGIVAQINPERCAGCGGCIAVCPYNAITMD 969 >gi|167552275|ref|ZP_02346028.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323057|gb|EDZ10896.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 223 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + N + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAANGIVDVNPDLCVGCQYCIAACPY 137 >gi|152978944|ref|YP_001344573.1| hydrogenase 2 protein HybA [Actinobacillus succinogenes 130Z] gi|150840667|gb|ABR74638.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Actinobacillus succinogenes 130Z] Length = 330 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + PD C C C CP + D Sbjct: 109 IKKQCMHCVEPNCVSVCPVQALTKNPITGIVQYDPDICTGCRYCMVACPFTVPQYD 164 >gi|317493909|ref|ZP_07952326.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918236|gb|EFV39578.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 181 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C VCP ++F+ + ++CI C C CP Sbjct: 58 CRQCEDAPCANVCPNGAISRQKDFIYVSQEKCIGCKTCVVACPYG 102 >gi|212692834|ref|ZP_03300962.1| hypothetical protein BACDOR_02333 [Bacteroides dorei DSM 17855] gi|237724884|ref|ZP_04555365.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. D4] gi|265754729|ref|ZP_06089781.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 3_1_33FAA] gi|212664623|gb|EEB25195.1| hypothetical protein BACDOR_02333 [Bacteroides dorei DSM 17855] gi|229436622|gb|EEO46699.1| pyruvate-formate lyase-activating enzyme [Bacteroides dorei 5_1_36/D4] gi|263234843|gb|EEZ20411.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 3_1_33FAA] Length = 302 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C++VCP + +C+ CG C ECP AI+ Sbjct: 53 CLGCG--TCLKVCPNGALTLTPEGIVTDKQKCVLCGRCAEECPAMAIE 98 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C G++ L +C+ CG C CP A Sbjct: 27 CPLSCVWCHNPEGIRNGKDKLY-TAKKCLGCGTCLKVCPNGA 67 >gi|126736831|ref|ZP_01752566.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] gi|126721416|gb|EBA18119.1| iron-sulfur cluster-binding protein [Roseobacter sp. SK209-2-6] Length = 254 Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEG 137 >gi|325121371|gb|ADY80894.1| putative iron-sulfur protein [Acinetobacter calcoaceticus PHEA-2] Length = 263 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCISACPVDAI 107 >gi|256810303|ref|YP_003127672.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793503|gb|ACV24172.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 247 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C+ C C+E CP++ + + + I+ D+CI CG C CP +AI Sbjct: 193 VNKDLCVGC--FVCIEECPINAIEQEGDKVKINKDKCILCGRCADVCPANAI 242 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 10/63 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-------HPDECIDCGVCEPECPVDAI 55 V ++C+ C C EVCP C E + I + D C+ C VC ECP++AI Sbjct: 156 VNLDSCMGCG--ACAEVCPKKCIRVESDIGEVIKTRDIEVNKDLCVGCFVCIEECPINAI 213 Query: 56 KPD 58 + + Sbjct: 214 EQE 216 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV C+ C C + CPVD + + I D+C+ C +C CPV AI Sbjct: 39 YVNETKCVRCNL--CYKECPVDAIEKAKIKKPAKIIHDKCVKCEICAQTCPVGAIY 92 Score = 37.4 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 28/76 (36%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--------------------------C 40 + C+ C+ C + CPV Y E I+ DE C Sbjct: 74 DKCVKCE--ICAQTCPVGAIYVIEGKAEINNDEVNYEIKNKVIPHRKIRLKNYELDESKC 131 Query: 41 IDCGVCEPECPVDAIK 56 I CG+C CP DAIK Sbjct: 132 IKCGICARYCPTDAIK 147 >gi|224371980|ref|YP_002606146.1| PflC2 [Desulfobacterium autotrophicum HRM2] gi|223694699|gb|ACN17982.1| PflC2 [Desulfobacterium autotrophicum HRM2] Length = 302 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++CI C +CV CP EN +A +CI+CG C CP +A++ Sbjct: 54 GQSCIGCG--ECVAACPEQALELNENGVARDLVKCINCGHCAEICPANAME 102 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 17/106 (16%) Query: 21 CPVDCFY----EG---ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK-INS- 71 CP+ C + EG E+ + + CI CG C CP A++ + +K IN Sbjct: 31 CPLSCPWCHNPEGLSLESRVTYNGQSCIGCGECVAACPEQALELNENGVARDLVKCINCG 90 Query: 72 EYATQWPN----ITTKKESLPSAAKMDGVKQKYEKYFSPNPGGKNT 113 A P T + S S +M K ++ F + GG T Sbjct: 91 HCAEICPANAMEKTGRCHSTDSLMEMI----KKDRLFYESSGGGVT 132 >gi|212691452|ref|ZP_03299580.1| hypothetical protein BACDOR_00944 [Bacteroides dorei DSM 17855] gi|237726262|ref|ZP_04556743.1| ferredoxin [Bacteroides sp. D4] gi|212666062|gb|EEB26634.1| hypothetical protein BACDOR_00944 [Bacteroides dorei DSM 17855] gi|229434788|gb|EEO44865.1| ferredoxin [Bacteroides dorei 5_1_36/D4] Length = 315 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCP + N I P +C C CE ECP AI+ P + + Sbjct: 223 SCIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 68 KI 69 ++ Sbjct: 281 EV 282 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVEVC D + + ++C CG C CP I+ Sbjct: 145 CLGCGD--CVEVCQFDAIHMNPETGLPEVDEEKCTACGACSKACPRKIIE 192 >gi|90408373|ref|ZP_01216536.1| electron transport complex protein RnfB [Psychromonas sp. CNPT3] gi|90310536|gb|EAS38658.1| electron transport complex protein RnfB [Psychromonas sp. CNPT3] Length = 190 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + ++ + CI C T C++ CPVD + + DEC C +C CP D I Sbjct: 105 LAFIREDECIGC--TKCIQACPVDAILGATRQMHTVITDECTGCELCVAPCPTDCI 158 >gi|73748057|ref|YP_307296.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Dehalococcoides sp. CBDB1] gi|73659773|emb|CAI82380.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Dehalococcoides sp. CBDB1] Length = 312 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + C +VCPV F + + + I CI C C CP A Sbjct: 146 PCMHCDNPPCTQVCPVGATFKQADGTVVIDYQRCIGCRFCIVACPYTA 193 >gi|330997031|ref|ZP_08320893.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] gi|329571529|gb|EGG53211.1| ferredoxin [Paraprevotella xylaniphila YIT 11841] Length = 318 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+ CP + N I P++C C CE CP AI P + + Sbjct: 223 SCIGCG--KCVKTCPFEAITLNNNLAYIDPEKCKLCRKCEEACPKGAIHAINFPPRKPKV 280 Query: 68 KINSEYATQWPNITTKKESLPSAAK 92 + + A P + AA+ Sbjct: 281 EKPTATAAPKPTNPAAQPVSAPAAQ 305 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 14/46 (30%), Gaps = 2/46 (4%) Query: 13 KHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 DCV C + + C CG C CP I+ Sbjct: 147 GGGDCVAACQFGALSINPETGLPEVDEERCTACGACVKTCPRRVIE 192 >gi|325969844|ref|YP_004246036.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] gi|323709047|gb|ADY02534.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] Length = 448 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 26/71 (36%), Gaps = 20/71 (28%) Query: 3 YVVTENCILCKHTDCVEVCPV------DCFYEG------------ENFLAIHPDECIDCG 44 +V E C C C EVCPV D G I D CI CG Sbjct: 108 FVNEELCTGCG--TCEEVCPVVLPKEYDYGLRGRKAAYIPFDTAVPKKAVIDIDNCIFCG 165 Query: 45 VCEPECPVDAI 55 CE ECP AI Sbjct: 166 QCERECPAGAI 176 >gi|322515042|ref|ZP_08068050.1| electron transport complex protein RnfB [Actinobacillus ureae ATCC 25976] gi|322118922|gb|EFX91099.1| electron transport complex protein RnfB [Actinobacillus ureae ATCC 25976] Length = 206 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 +V + CI C T C++ CPVD + I D C C +C CP + I+ Sbjct: 109 AFVHEDMCIGC--TKCIQACPVDAIIGTNKAMHTIIADLCTGCELCVAPCPTNCIEMIKV 166 Query: 60 EPGLELW 66 +P W Sbjct: 167 KPSARSW 173 >gi|283786726|ref|YP_003366591.1| formate hydrogenlyase subunit 2 [Citrobacter rodentium ICC168] gi|282950180|emb|CBG89816.1| formate hydrogenlyase subunit 2 [Citrobacter rodentium ICC168] Length = 203 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|257790276|ref|YP_003180882.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830250|ref|ZP_08163707.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474173|gb|ACV54493.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487717|gb|EGC90155.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 222 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y +T C C +CV+VCP ++ E+ I +CI C C CP + E Sbjct: 58 YFLTVQCQHCADPECVKVCPTGASHKLEDGTVQIDKSKCIGCQFCAMSCPYGVRYLNEEE 117 >gi|116074820|ref|ZP_01472081.1| ferredoxin [Synechococcus sp. RS9916] gi|116068042|gb|EAU73795.1| ferredoxin [Synechococcus sp. RS9916] Length = 74 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 11/73 (15%) Query: 1 MTYV-VTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + VT+ C DC++ CPV C G+ F I D CIDCG+C CPV Sbjct: 1 MAHTFVTDVCEGI--ADCLDACPVACIQPGKGRNKKGTEFFWIDFDTCIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + AI + P L+ Sbjct: 59 EGAILAEERPDLQ 71 >gi|320640863|gb|EFX10351.1| putative polyferredoxin [Escherichia coli O157:H7 str. G5101] Length = 284 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CIDC VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIR 64 >gi|269962089|ref|ZP_06176443.1| electron transport complex protein RnfB [Vibrio harveyi 1DA3] gi|269833173|gb|EEZ87278.1| electron transport complex protein RnfB [Vibrio harveyi 1DA3] Length = 197 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 60 EPGLELWL-KINS 71 E E W K+N+ Sbjct: 165 ETTTESWKWKLNA 177 >gi|289432084|ref|YP_003461957.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalococcoides sp. GT] gi|288945804|gb|ADC73501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalococcoides sp. GT] Length = 312 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + C +VCPV F + + + I CI C C CP A Sbjct: 146 PCMHCDNPPCTQVCPVGATFKQADGTVVIDYQRCIGCRFCIVACPYTA 193 >gi|298530775|ref|ZP_07018177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510149|gb|EFI34053.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 307 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C +C + CP + D C+ CGVC CPV +K + Sbjct: 239 ELCIKCG--ECAQACPFQAIAMSREGPVVSQDLCMGCGVCVSRCPVQGLKLKRQKDKSPP 296 Query: 67 LKIN 70 L++N Sbjct: 297 LEVN 300 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 11/27 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI CG C CP AI E Sbjct: 237 DQELCIKCGECAQACPFQAIAMSREGP 263 >gi|253700578|ref|YP_003021767.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251775428|gb|ACT18009.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 278 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + + CI C C CP K + Sbjct: 81 EMCMHCNEPACASVCPVGAFTKTKEGPVVYDAKRCIGCRFCMVACPFGVPKYE 133 >gi|15219311|ref|NP_173114.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative [Arabidopsis thaliana] gi|297844602|ref|XP_002890182.1| ATMLO14 [Arabidopsis lyrata subsp. lyrata] gi|9989050|gb|AAG10813.1|AC011808_1 Putative NADH-ubiquinone oxidoreductase [Arabidopsis thaliana] gi|16649105|gb|AAL24404.1| Putative NADH-ubiquinone oxidoreductase [Arabidopsis thaliana] gi|20148605|gb|AAM10193.1| putative NADH-ubiquinone oxidoreductase [Arabidopsis thaliana] gi|21553581|gb|AAM62674.1| NADH:ubiquinone oxidoreductase, putative [Arabidopsis thaliana] gi|297336024|gb|EFH66441.1| ATMLO14 [Arabidopsis lyrata subsp. lyrata] gi|332191363|gb|AEE29484.1| Alpha-helical ferredoxin [Arabidopsis thaliana] Length = 222 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAVCPAQAITIEAEERED 147 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|238784803|ref|ZP_04628805.1| hypothetical protein yberc0001_7880 [Yersinia bercovieri ATCC 43970] gi|238714316|gb|EEQ06326.1| hypothetical protein yberc0001_7880 [Yersinia bercovieri ATCC 43970] Length = 680 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 62 CHHCEDAPCASTCPNGAIVEINNSVQVIQEKCIGCKTCIIACPFG 106 >gi|333028872|ref|ZP_08456936.1| putative Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. Tu6071] gi|332748724|gb|EGJ79165.1| putative Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. Tu6071] Length = 267 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 78 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIEQ 130 >gi|242277839|ref|YP_002989968.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120733|gb|ACS78429.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 200 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCP ++ + + D C+ C C CP A++ Sbjct: 62 CRHCEDAPCAAVCPNGAIQRTDSGVQVDEDHCVGCKTCLAACPFGAME 109 >gi|194476648|ref|YP_002048827.1| ferredoxin [Paulinella chromatophora] gi|171191655|gb|ACB42617.1| ferredoxin [Paulinella chromatophora] Length = 74 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 11/74 (14%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VT+ C DCV CPV C + G NF I + CIDCG+C CP+ Sbjct: 1 MAHTIVTDICEGI--ADCVNACPVACIHMGNGINKKGTNFYWIDFNTCIDCGICLQVCPL 58 Query: 53 D-AIKPDTEPGLEL 65 + AI + L+ Sbjct: 59 ENAILAEERSELQQ 72 >gi|11498785|ref|NP_070014.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649398|gb|AAB90058.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 131 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDA 54 E C+ C CV +CP + Y G+ +AI+ ++C+ CG C CP A Sbjct: 80 EKCVHCG--ACVSICPTEAIYINGDKRVAINTEKCVHCGSCVKVCPTRA 126 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 4/37 (10%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 ++C+ CG C CP +AI + + + IN+E Sbjct: 78 DDEKCVHCGACVSICPTEAIYINGD----KRVAINTE 110 >gi|147668913|ref|YP_001213731.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Dehalococcoides sp. BAV1] gi|146269861|gb|ABQ16853.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Dehalococcoides sp. BAV1] Length = 312 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + C +VCPV F + + + I CI C C CP A Sbjct: 146 PCMHCDNPPCTQVCPVGATFKQADGIVVIDYQRCIGCRFCIVACPYTA 193 >gi|327401002|ref|YP_004341841.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus veneficus SNP6] gi|327316510|gb|AEA47126.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus veneficus SNP6] Length = 793 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 YV+ E C C C EVC + + P+ C CG C CP +A Sbjct: 566 AYVIPELCFGCNL--CKEVCDFNAIDMAWGKAYVKPN-CTGCGACAAACPTNA 615 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 20/72 (27%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA------------------IHPDECIDC 43 VT+ C C C +CPV+ E E LA I + C+ C Sbjct: 233 ARFVTDACTGCGV--CATLCPVEVPNEFEMGLANRKAIYIPFPQAVPLQYTIDAEHCLGC 290 Query: 44 GVCEPECPVDAI 55 G+C C AI Sbjct: 291 GMCSDVCSASAI 302 >gi|302390736|ref|YP_003826557.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosediminibacter oceani DSM 16646] gi|302201364|gb|ADL08934.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosediminibacter oceani DSM 16646] Length = 383 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C CV+VCP ++ + I C+ CG C CP A+ + Sbjct: 195 IKARCIRCGQ--CVDVCPHKSLQLVDDSIVIDKTVCVKCGRCARVCPEKALVVPIDEE 250 >gi|294634810|ref|ZP_06713334.1| electron transport protein HydN [Edwardsiella tarda ATCC 23685] gi|291091778|gb|EFE24339.1| electron transport protein HydN [Edwardsiella tarda ATCC 23685] Length = 157 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C VCP ++F+ + ++CI C C CP Sbjct: 35 CRQCEDAPCANVCPNGAISRQQDFICVDQEKCIGCKTCVVACPYG 79 >gi|269138998|ref|YP_003295699.1| tetrathionate reductase, subunit B [Edwardsiella tarda EIB202] gi|267984659|gb|ACY84488.1| tetrathionate reductase, subunit B [Edwardsiella tarda EIB202] gi|304558934|gb|ADM41598.1| Tetrathionate reductase subunit B [Edwardsiella tarda FL6-60] Length = 254 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV VCPV Y+ ++ + + C+ C C CP DA Sbjct: 108 CNHCENPPCVAVCPVQATYQRDDGIVMVDNRRCVGCAYCIQACPYDA 154 >gi|213021403|ref|ZP_03335850.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 13 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 68 >gi|124023226|ref|YP_001017533.1| ferredoxin 4Fe-4S [Prochlorococcus marinus str. MIT 9303] gi|123963512|gb|ABM78268.1| ferredoxin, 4Fe-4S [Prochlorococcus marinus str. MIT 9303] Length = 74 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV 52 M + +VTE C DC + CPV C G+ NF I+ D CIDCG+C CPV Sbjct: 1 MPHSIVTEICEGV--ADCAQACPVGCIQPGQGKNDKGRNFYLINFDICIDCGICLQVCPV 58 Query: 53 D-AIKPDTEPGLE 64 + A+ P+ L+ Sbjct: 59 EGAVLPEERRDLQ 71 >gi|288932883|ref|YP_003436943.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288895131|gb|ADC66668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 196 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +Y C C C+E CP EN + + D CI+CG+C CP I+ Sbjct: 55 SYAFPSKCRHCDPAPCLEACPTSAINREENIVFVEVDRCINCGMCAMVCPFGVIRF 110 >gi|271501151|ref|YP_003334176.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270344706|gb|ACZ77471.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 180 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C+ C VCP + + + ++CI C C CP A Sbjct: 54 TIQCRHCEDAPCANVCPNGAIVHAGDHIRVQQEKCIGCKTCVVACPYGA 102 >gi|257792519|ref|YP_003183125.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476416|gb|ACV56736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +C C + C VCP ++ E L +CI CG C CP A D Sbjct: 59 AYHVSISCNHCNNPVCTRVCPTGAMHKDELGLVWPDATKCIGCGYCTMACPYHAPHIDAR 118 >gi|157148263|ref|YP_001455581.1| hypothetical protein CKO_04080 [Citrobacter koseri ATCC BAA-895] gi|157085468|gb|ABV15146.1| hypothetical protein CKO_04080 [Citrobacter koseri ATCC BAA-895] Length = 170 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 16 QLCHHCEDAPCAVVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 66 >gi|41033733|emb|CAF18533.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Thermoproteus tenax] Length = 650 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 YVV + C C C + + + I P C C +C CP +AIKP Sbjct: 580 YVVDADKCKSCG--ICYNLLKCYAISKQPDGKAWIDPSLCNGCSMCAQVCPYNAIKPQEP 637 Query: 61 PGLELWLKI 69 + WL++ Sbjct: 638 GKVNRWLEL 646 >gi|330984846|gb|EGH82949.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 290 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|331006635|ref|ZP_08329919.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC1989] gi|330419550|gb|EGG93932.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC1989] Length = 216 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 115 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVDECTGCDLCVEPCPVDCIDMLPV 172 Query: 60 EPGLELW 66 E L+ W Sbjct: 173 EQTLQEW 179 Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 144 MHTVIVDECTGCDL--CVEPCPVDCI 167 >gi|311105621|ref|YP_003978474.1| sulfur reductase FeS subunit [Achromobacter xylosoxidans A8] gi|310760310|gb|ADP15759.1| sulfur reductase FeS subunit [Achromobacter xylosoxidans A8] Length = 256 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + + C+ C C CP DA I +T+ + Sbjct: 112 CNHCDNPPCVPVCPVQATFQREDGIVLVDNERCVGCAYCVQACPYDARFINHETQTADK 170 >gi|293608863|ref|ZP_06691166.1| electron transport complex [Acinetobacter sp. SH024] gi|292829436|gb|EFF87798.1| electron transport complex [Acinetobacter sp. SH024] Length = 263 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 87 IREDECIGCTKCISACPVDAI 107 >gi|297526112|ref|YP_003668136.1| Cobyrinic acid ac-diamide synthase [Staphylothermus hellenicus DSM 12710] gi|297255028|gb|ADI31237.1| Cobyrinic acid ac-diamide synthase [Staphylothermus hellenicus DSM 12710] Length = 329 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V E CI C +C++VCP + N I+ C C C CP AI+ Sbjct: 72 IVEEKCINCG--ECMKVCPFNAVELINNKYVINKWICEGCYTCSFVCPTKAIR 122 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ +YEG + I ++CI+CG C CP +A++ Sbjct: 61 IEPYYEG-RYAEIVEEKCINCGECMKVCPFNAVE 93 >gi|160915265|ref|ZP_02077478.1| hypothetical protein EUBDOL_01273 [Eubacterium dolichum DSM 3991] gi|158433064|gb|EDP11353.1| hypothetical protein EUBDOL_01273 [Eubacterium dolichum DSM 3991] Length = 87 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI C CV VCPV ++ CIDCG C CPV+AI Sbjct: 35 VNADTCIGCG--ACVGVCPVGALSMNADSKSECDEGTCIDCGSCISACPVEAI 85 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 ++ D CI CG C CPV A+ + + E Sbjct: 35 VNADTCIGCGACVGVCPVGALSMNADSKSE 64 >gi|197118647|ref|YP_002139074.1| formate dehydrogenase iron-sulfur subunit [Geobacter bemidjiensis Bem] gi|197088007|gb|ACH39278.1| formate dehydrogenase, iron-sulfur subunit [Geobacter bemidjiensis Bem] Length = 279 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + + CI C C CP K + Sbjct: 82 EMCMHCNEPACASVCPVGAFKKTKEGPVVYDAKRCIGCRFCMVACPFGVPKYE 134 >gi|224023700|ref|ZP_03642066.1| hypothetical protein BACCOPRO_00416 [Bacteroides coprophilus DSM 18228] gi|224016922|gb|EEF74934.1| hypothetical protein BACCOPRO_00416 [Bacteroides coprophilus DSM 18228] Length = 322 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +CI C CV+VCP + N I P +C C CE ECP AI Sbjct: 220 SCIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCEMECPKGAIH 266 Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + ++C CG C CP + I+ Sbjct: 142 CLGCGD--CVSACQFDAIHINPETGLPEVDENKCTACGACSKACPRNIIE 189 >gi|222100042|ref|YP_002534610.1| Fe-hydrogenase beta subunit [Thermotoga neapolitana DSM 4359] gi|221572432|gb|ACM23244.1| Fe-hydrogenase beta subunit [Thermotoga neapolitana DSM 4359] Length = 626 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C C CP + E I ++C+ CGVC +CP AI+ Sbjct: 571 YVINPEICKGCGL--CARSCPQNAITGERGKPYRIDQEKCVKCGVCASKCPFKAIE 624 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+P+ C CG+C CP +AI + Sbjct: 559 ECPSG-MCTAFKKYVINPEICKGCGLCARSCPQNAITGE 596 >gi|194289439|ref|YP_002005346.1| benzoyl-CoA oxygenase component a [Cupriavidus taiwanensis LMG 19424] gi|193223274|emb|CAQ69279.1| Benzoyl-CoA oxygenase component A [Cupriavidus taiwanensis LMG 19424] Length = 414 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRCN--TCEDTCPIDAITHDDRNYVVRADVCNGCNACLSPCPTGAI 61 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHDDR 37 >gi|194446804|ref|YP_002043530.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405467|gb|ACF65689.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 223 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + N + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAANGIVDVNPDLCVGCQYCIAACPY 137 >gi|164686675|ref|ZP_02210703.1| hypothetical protein CLOBAR_00270 [Clostridium bartlettii DSM 16795] gi|164604065|gb|EDQ97530.1| hypothetical protein CLOBAR_00270 [Clostridium bartlettii DSM 16795] Length = 183 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C+ CPV +N + + +CI C C CP AI Sbjct: 65 CRHCEDAPCLNTCPVKAISRIDNSVIVDEVKCIGCKTCLLACPFGAI 111 >gi|161502103|ref|YP_001569215.1| hypothetical protein SARI_00120 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863450|gb|ABX20073.1| hypothetical protein SARI_00120 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 169 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 16 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 66 >gi|51244330|ref|YP_064214.1| Fe-S-cluster-containing oxidoreductase [Desulfotalea psychrophila LSv54] gi|50875367|emb|CAG35207.1| related to Fe-S-cluster-containing oxidoreductase [Desulfotalea psychrophila LSv54] Length = 200 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C C+ + C CPV + E+ + + + C+ C C CP AI+ Sbjct: 55 TVPVQCRQCEDSPCANACPVGAIVQRESHIDVIAELCVGCKSCLLACPFGAIQ 107 >gi|330889574|gb|EGH22235.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 290 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|324516961|gb|ADY46687.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8 [Ascaris suum] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 106 ERCIACKL--CEAICPAQAITIEAEERPDGSRRTTRYDIDMTKCIFCGLCQEACPVDAI 162 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 106 ERCIACKLCEAICPAQAITIEAEE 129 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 147 CIFCGL--CQEACPVDAIVEGPNF 168 >gi|323183237|gb|EFZ68634.1| hydrogenase-4 component A [Escherichia coli 1357] Length = 153 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 36 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 88 >gi|237712108|ref|ZP_04542589.1| ferredoxin [Bacteroides sp. 9_1_42FAA] gi|229453429|gb|EEO59150.1| ferredoxin [Bacteroides sp. 9_1_42FAA] Length = 315 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCP + N I P +C C CE ECP AI+ P + + Sbjct: 223 SCIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCESECPKGAIQAINFPPRKPKV 280 Query: 68 KI 69 ++ Sbjct: 281 EV 282 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVE C D + + ++C CG C CP I+ Sbjct: 145 CLGCGD--CVEACQFDAIHMNPETGLPEVDEEKCTACGACSKACPRKIIE 192 >gi|189461429|ref|ZP_03010214.1| hypothetical protein BACCOP_02084 [Bacteroides coprocola DSM 17136] gi|189431958|gb|EDV00943.1| hypothetical protein BACCOP_02084 [Bacteroides coprocola DSM 17136] Length = 490 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP F + I D CI CG+C CP AI Sbjct: 113 YEVSNLCRGCVARSCYMNCPKGAVHFDKKTGQAHIDHDTCISCGICHKSCPYHAIVY 169 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVC 46 ++ + CI C C E CPV + EN I +CI CG C Sbjct: 145 AHIDHDTCISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDENNIEHIDESKCIYCGKC 204 Query: 47 EPECPVDAIKP 57 CP AI Sbjct: 205 LNACPFGAIFE 215 >gi|146312838|ref|YP_001177912.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Enterobacter sp. 638] gi|145319714|gb|ABP61861.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Enterobacter sp. 638] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ E + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAGVCPVNAITRVEGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|330973101|gb|EGH73167.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 291 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCIAPCPVDCIE 137 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C C+ CPVDC Sbjct: 113 MHTVIIDECTGCDL--CIAPCPVDCIEM 138 >gi|225175927|ref|ZP_03729919.1| NADH dehydrogenase (quinone) [Dethiobacter alkaliphilus AHT 1] gi|225168515|gb|EEG77317.1| NADH dehydrogenase (quinone) [Dethiobacter alkaliphilus AHT 1] Length = 597 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C++ CP D EGE + ++CI CG C CP A+ + Sbjct: 549 CVGCGV--CIKACPTDAI-EGERKQAHHLDMEKCIKCGGCVDACPFHAVIKE 597 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CP + F I C+ CGVC CP DAI+ + + L ++ Sbjct: 531 CPAG-VCQALFFYRIDDHICVGCGVCIKACPTDAIEGERKQAHHLDME 577 >gi|254466651|ref|ZP_05080062.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium Y4I] gi|206687559|gb|EDZ48041.1| iron-sulfur cluster-binding protein [Rhodobacterales bacterium Y4I] Length = 258 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDHCIGCGLCAWSCPYGARELDLAEG 137 >gi|270307565|ref|YP_003329623.1| Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit [Dehalococcoides sp. VS] gi|270153457|gb|ACZ61295.1| Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit [Dehalococcoides sp. VS] Length = 267 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C CV VCPV ++ N + D+C C C+ CP K + + Sbjct: 73 CLHCYEPACVSVCPVGALHKRPNGAVVWDQDKCFGCRYCQNACPFQIPKFEWDDNWAK 130 >gi|237709522|ref|ZP_04540003.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 9_1_42FAA] gi|229456578|gb|EEO62299.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 9_1_42FAA] Length = 300 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C++VCP + +C+ CG C ECP AI+ Sbjct: 51 CLGCG--TCLKVCPNGALTLTPEGIVTDKQKCVLCGRCAEECPAMAIE 96 Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C G++ L +C+ CG C CP A Sbjct: 25 CPLSCVWCHNPEGIRNGKDKLY-TAKKCLGCGTCLKVCPNGA 65 >gi|221211188|ref|ZP_03584167.1| ferredoxin [Burkholderia multivorans CGD1] gi|221168549|gb|EEE01017.1| ferredoxin [Burkholderia multivorans CGD1] Length = 87 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPHDPQHDESH 69 >gi|148361193|ref|YP_001252400.1| electron transport complex protein [Legionella pneumophila str. Corby] gi|296108529|ref|YP_003620230.1| hypothetical protein lpa_04189 [Legionella pneumophila 2300/99 Alcoy] gi|148282966|gb|ABQ57054.1| Electron transport complex protein [Legionella pneumophila str. Corby] gi|295650431|gb|ADG26278.1| hypothetical protein lpa_04189 [Legionella pneumophila 2300/99 Alcoy] Length = 204 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + I EC CG+C CPVD I+ Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIE 130 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 79 IKEDECIGCTKCIKACPVDAI 99 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M ++T C C CV+ CPVDC Sbjct: 106 MHAIITHECTGCGL--CVDPCPVDCIEM 131 >gi|52843076|ref|YP_096875.1| iron-sulfur cluster binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630187|gb|AAU28928.1| iron-sulfur cluster binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 204 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C T C++ CPVD + I EC CG+C CPVD I+ + P Sbjct: 82 DECIGC--TKCIKACPVDAIIGSSKLMHAIITHECTGCGLCVDPCPVDCIEMVSLPAA 137 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 79 IKEDECIGCTKCIKACPVDAI 99 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M ++T C C CV+ CPVDC Sbjct: 106 MHAIITHECTGCGL--CVDPCPVDCIEM 131 >gi|331010114|gb|EGH90170.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 290 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|329114686|ref|ZP_08243445.1| NADH-quinone oxidoreductase subunit I [Acetobacter pomorum DM001] gi|326696166|gb|EGE47848.1| NADH-quinone oxidoreductase subunit I [Acetobacter pomorum DM001] Length = 162 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 20/100 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C CP + E E I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEATCPAEAITIEAEERDDGSRRTTRYDIDMTKCIYCGLCEEACPVDAIV 118 Query: 56 -----KPDTEPGLELWLKINSEYA--TQWPNITTKKESLP 88 + TE EL N A +W + ++ L Sbjct: 119 EGPNYEFATETREELMYDKNKLLANGDRWEALLARRLELD 158 >gi|257094088|ref|YP_003167729.1| putative glutamate synthase (NADPH) small subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046612|gb|ACV35800.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 540 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 9 CILCKHT----DCVEVCPVDC-FYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C+ C + +C VCP + G N + D C CG+C ECP AIK + E Sbjct: 481 CLSCGNCFECDNCYGVCPDNAVIKLGPGNRFQFNYDYCKGCGMCVAECPCGAIKMEAEE 539 >gi|253688807|ref|YP_003017997.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755385|gb|ACT13461.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 223 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C H CV+VCP + + N + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACPYQVRFIHPKTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|227329116|ref|ZP_03833140.1| nitrite reductase complex component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 223 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C H CV+VCP + + N + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDATNGIVDVNPDLCVGCQYCIAACPYQVRFIHPKTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|206559193|ref|YP_002229953.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] gi|198035230|emb|CAR51104.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315] Length = 88 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|170749599|ref|YP_001755859.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656121|gb|ACB25176.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 675 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 T C++VCP + + I P C CG C CP A L ++ Sbjct: 284 TRCLDVCPTGAIAPAGDTVRIDPYVCAGCGSCAALCPTGAAAYALPTSDALMRRL 338 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 4/63 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C LC CV CP + L C+ CG+C CP D I + Sbjct: 523 DCTLCL--ACVSACPTHALSDSAEQPLLGFEESLCVQCGLCAATCPEDVITLRPQVDFAA 580 Query: 66 WLK 68 W Sbjct: 581 WAA 583 >gi|117618154|ref|YP_857269.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559561|gb|ABK36509.1| 4Fe-4S binding domain protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 222 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +C C + CV VCP + + I+PD C+ C C CP Sbjct: 92 SCQHCDNAPCVHVCPTGASHIRAEDGIVDINPDLCVGCRYCLAACPYQ 139 >gi|121997517|ref|YP_001002304.1| RnfABCDGE type electron transport complex subunit C [Halorhodospira halophila SL1] gi|121588922|gb|ABM61502.1| electron transport complex, RnfABCDGE type, C subunit [Halorhodospira halophila SL1] Length = 681 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI-KPDT 59 ++ CI C T C+ CPVD + + + DEC C +C CP+D I Sbjct: 103 AFIDESQCIGC--TRCLPACPVDAIVGAQRQVHTVLADECTGCRLCVDACPMDCITMQPV 160 Query: 60 EPGLELWL 67 EP L + Sbjct: 161 EPPLNARI 168 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 18/38 (47%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ PV G I +CI C C P CPVDAI Sbjct: 88 VDPEPVADDSTGPAVAFIDESQCIGCTRCLPACPVDAI 125 Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 16/59 (27%) Query: 7 ENCILCKHTDCVEVCPVDC--------------FYEGENFLAIHPDECIDCGVCEPECP 51 + CI C C EVCP E + + P C C CE CP Sbjct: 552 QPCISCG--RCAEVCPEGLQPFEMARRIRAGVDVGEAAEHIDLDPMRCTGCSSCELVCP 608 >gi|238793374|ref|ZP_04637000.1| hypothetical protein yinte0001_34690 [Yersinia intermedia ATCC 29909] gi|238727343|gb|EEQ18871.1| hypothetical protein yinte0001_34690 [Yersinia intermedia ATCC 29909] Length = 674 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNSVQVIQEKCIGCKTCMIACPFG 100 >gi|313650921|gb|EFS15321.1| protein aegA [Shigella flexneri 2a str. 2457T] gi|332755105|gb|EGJ85470.1| protein aegA [Shigella flexneri 4343-70] gi|332755505|gb|EGJ85869.1| protein aegA [Shigella flexneri K-671] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|291285962|ref|YP_003502778.1| NADH dehydrogenase (quinone) [Denitrovibrio acetiphilus DSM 12809] gi|290883122|gb|ADD66822.1| NADH dehydrogenase (quinone) [Denitrovibrio acetiphilus DSM 12809] Length = 597 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 VV E C C C + CPVD E + F I ++C+ C C CP +AI Sbjct: 546 VVNERCKKCGL--CKKACPVDAITWEKKQFAVIDNEKCVKCRECIVNCPFNAI 596 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CP E F+ ++ + C CG+C+ CPVDAI + + Sbjct: 533 CPARECAELIEFVVVN-ERCKKCGLCKKACPVDAITWEKKQ 572 >gi|227496950|ref|ZP_03927202.1| anaerobic dimethyl sulfoxide reductase, subunit B [Actinomyces urogenitalis DSM 15434] gi|226833558|gb|EEH65941.1| anaerobic dimethyl sulfoxide reductase, subunit B [Actinomyces urogenitalis DSM 15434] Length = 212 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 TY + +C C++ C+EVCP + E+ + + +C+ C C+ CP A + D Sbjct: 67 TYYTSVSCNHCENPVCMEVCPTTAMSKREDGTVYVDQSKCVGCRYCQWACPYGAPQLDPR 126 Query: 61 PGL 63 G Sbjct: 127 SGH 129 >gi|182417722|ref|ZP_02949040.1| uptake hydrogenase [Clostridium butyricum 5521] gi|237668967|ref|ZP_04528951.1| NADH dehydrogenase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378446|gb|EDT75977.1| uptake hydrogenase [Clostridium butyricum 5521] gi|237657315|gb|EEP54871.1| putative iron hydrogenase, electron-transfer subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 656 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C + C CPV E + I ++CI CG C ECP +A++ Sbjct: 606 DKCRGC--SKCSRNCPVQAIQGEIKKTFEIDKEKCIKCGQCIIECPFNAVE 654 Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP + I+ D+C C C CPV AI+ + + E Sbjct: 590 CPGG-VCKALISYEINKDKCRGCSKCSRNCPVQAIQGEIKKTFE 632 >gi|62181355|ref|YP_217772.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584629|ref|YP_002638427.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62128988|gb|AAX66691.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469156|gb|ACN46986.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715838|gb|EFZ07409.1| Formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|238785613|ref|ZP_04629592.1| Electron transport complex protein rnfB [Yersinia bercovieri ATCC 43970] gi|238713500|gb|EEQ05533.1| Electron transport complex protein rnfB [Yersinia bercovieri ATCC 43970] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|328954388|ref|YP_004371722.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328454712|gb|AEB10541.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 271 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CV VCP + + + + CI C C CP A + + Sbjct: 134 CNHCDNPPCVRVCPTQATFRRPDGMVMMDMHRCIGCRYCMAACPFGARSFNWKDPRPYLK 193 Query: 68 KINSEY 73 ++N Y Sbjct: 194 EVNMNY 199 >gi|300855721|ref|YP_003780705.1| putative Fe-S-cluster-binding protein [Clostridium ljungdahlii DSM 13528] gi|300435836|gb|ADK15603.1| predicted Fe-S-cluster-binding protein [Clostridium ljungdahlii DSM 13528] Length = 204 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVD-CFYEGENF-LAIHPDECIDCGVCEPECPVD 53 Y + C C+ CV+VCP C+ E+ + I ++CI C C CP + Sbjct: 53 YFLPVMCQQCEDPACVKVCPTGACYKRSEDGVIVIDKEKCIGCKSCHRACPYE 105 >gi|300854979|ref|YP_003779963.1| putative Fe-S cluster protein [Clostridium ljungdahlii DSM 13528] gi|300435094|gb|ADK14861.1| predicted Fe-S cluster protein [Clostridium ljungdahlii DSM 13528] Length = 344 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL-ELWL 67 C C + C + CP + I+ D+C+ C C CP AI + + + Sbjct: 191 CKGC--SACAKKCPQNAIIV-NRKARINKDKCVGCASCMAICPQGAIYHSWLGSMTKSFN 247 Query: 68 KINSEYA 74 + +EYA Sbjct: 248 ERLAEYA 254 >gi|296135781|ref|YP_003643023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295795903|gb|ADG30693.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 275 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D + G Sbjct: 72 SCLHCEEPPCVPVCPTGASYKRQEDGIVLVDSDKCIGCKYCSWACPYGAREYDEDRG 128 >gi|269929290|ref|YP_003321611.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269788647|gb|ACZ40789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sphaerobacter thermophilus DSM 20745] Length = 282 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C C+EVCP E + + I D C C C CP I Sbjct: 78 SDVCKHCVQAGCLEVCPTGAIIRTEFDTVVIQADVCNGCRACISACPFGVI 128 >gi|78223461|ref|YP_385208.1| electron transfer flavoprotein subunit alpha [Geobacter metallireducens GS-15] gi|78194716|gb|ABB32483.1| Electron transfer flavoprotein, alpha subunit [Geobacter metallireducens GS-15] Length = 442 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 5/83 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C C VCPV+C + ++ +CI C C CP A++ P Sbjct: 18 IAGACIACGAR-CQSVCPVNCVDMNDAGEPVVNSAKCIGCQKCVKICPATALEMYFTPEE 76 Query: 64 ELWLKINSEYATQWPNITTKKES 86 KI E A Q + + + Sbjct: 77 R---KILDELAAQGDPVEEEIDP 96 >gi|50084303|ref|YP_045813.1| putative iron-sulfur protein [Acinetobacter sp. ADP1] gi|49530279|emb|CAG67991.1| conserved hypothetical protein; putative iron-sulfur protein [Acinetobacter sp. ADP1] Length = 250 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKP-DTEPGLE 64 + CI C T C+ CPVD G+ + D C C +C P CPVD I + L Sbjct: 76 DECIGC--TKCISACPVDAIIGSGKLMHTVLTDLCTGCELCIPPCPVDCIDLVEDREPLP 133 Query: 65 LWLKINSE 72 + N+E Sbjct: 134 TIAERNNE 141 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 73 IREDECIGCTKCISACPVDAI 93 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 100 MHTVLTDLCTGCEL--CIPPCPVDCI 123 >gi|16761629|ref|NP_457246.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766158|ref|NP_461773.1| hydrogenase-3 iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143113|ref|NP_806455.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161615755|ref|YP_001589720.1| hypothetical protein SPAB_03546 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550308|ref|ZP_02344065.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994156|ref|ZP_02575248.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168262034|ref|ZP_02684007.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464022|ref|ZP_02697939.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820460|ref|ZP_02832460.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|198245498|ref|YP_002216824.1| formate hydrogenlyase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386852|ref|ZP_03213464.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353796|ref|YP_002227597.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858115|ref|YP_002244766.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052194|ref|ZP_03345072.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213580306|ref|ZP_03362132.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213648119|ref|ZP_03378172.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854929|ref|ZP_03383169.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25285331|pir||AH0846 formate hydrogenlyase chain 2 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421398|gb|AAL21732.1| hydrogenase-3, iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503930|emb|CAD05959.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi] gi|29138746|gb|AAO70315.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161365119|gb|ABX68887.1| hypothetical protein SPAB_03546 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|195633759|gb|EDX52173.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197940014|gb|ACH77347.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603950|gb|EDZ02495.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205273577|emb|CAR38564.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324786|gb|EDZ12625.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327950|gb|EDZ14714.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205342944|gb|EDZ29708.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349088|gb|EDZ35719.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709918|emb|CAR34272.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247988|emb|CBG25821.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994975|gb|ACY89860.1| hydrogenase-3 iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159412|emb|CBW18930.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913870|dbj|BAJ37844.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087255|emb|CBY97020.1| Formate hydrogenlyase subunit 2 FHL subunit 2; Hydrogenase-3 component B [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223404|gb|EFX48470.1| Formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614329|gb|EFY11260.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621606|gb|EFY18459.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624467|gb|EFY21300.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628798|gb|EFY25581.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633475|gb|EFY30217.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635949|gb|EFY32657.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639657|gb|EFY36342.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646840|gb|EFY43343.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650608|gb|EFY47013.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654780|gb|EFY51099.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659000|gb|EFY55253.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664433|gb|EFY60627.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668318|gb|EFY64475.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673702|gb|EFY69803.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677763|gb|EFY73826.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681407|gb|EFY77439.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683809|gb|EFY79819.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323131203|gb|ADX18633.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193802|gb|EFZ79005.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200272|gb|EFZ85354.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203225|gb|EFZ88254.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205528|gb|EFZ90493.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210039|gb|EFZ94942.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216342|gb|EGA01069.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221090|gb|EGA05521.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226911|gb|EGA11093.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230805|gb|EGA14923.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234844|gb|EGA18930.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238883|gb|EGA22933.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241583|gb|EGA25614.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248270|gb|EGA32206.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251146|gb|EGA35019.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256029|gb|EGA39767.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263164|gb|EGA46702.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264331|gb|EGA47837.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271158|gb|EGA54586.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624583|gb|EGE30928.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628904|gb|EGE35247.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989724|gb|AEF08707.1| hydrogenase-3 iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|332968212|gb|EGK07289.1| ferredoxin [Kingella kingae ATCC 23330] Length = 83 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 MT +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MTLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I D E +N Y Sbjct: 59 ILIDEEHPETHDELMNKYY 77 >gi|312883748|ref|ZP_07743468.1| electron transport complex protein RnfB [Vibrio caribbenthicus ATCC BAA-2122] gi|309368598|gb|EFP96130.1| electron transport complex protein RnfB [Vibrio caribbenthicus ATCC BAA-2122] Length = 196 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 16/32 (50%) Query: 24 DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 D E + IH D CI C C CPVDAI Sbjct: 98 DLGNEVKTVAFIHEDMCIGCTKCIQACPVDAI 129 >gi|331684511|ref|ZP_08385103.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H299] gi|331078126|gb|EGI49332.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H299] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|291086289|ref|ZP_06355289.2| hydrogenase-4 component A [Citrobacter youngae ATCC 29220] gi|291068758|gb|EFE06867.1| hydrogenase-4 component A [Citrobacter youngae ATCC 29220] Length = 170 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 16 QLCHQCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 66 >gi|256544554|ref|ZP_05471927.1| NADP-reducing hydrogenase, subunit C [Anaerococcus vaginalis ATCC 51170] gi|256399879|gb|EEU13483.1| NADP-reducing hydrogenase, subunit C [Anaerococcus vaginalis ATCC 51170] Length = 512 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPV 52 ++Y + +NCI C C CPV C + I ++CI CG C CP+ Sbjct: 454 LSYKIEDNCIGCG--TCKRNCPVGCISGKVKEKHTIDQEKCIKCGTCYNVCPI 504 Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 11/22 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 D CI CG C+ CPV I Sbjct: 456 YKIEDNCIGCGTCKRNCPVGCI 477 >gi|154496500|ref|ZP_02035196.1| hypothetical protein BACCAP_00792 [Bacteroides capillosus ATCC 29799] gi|150274133|gb|EDN01224.1| hypothetical protein BACCAP_00792 [Bacteroides capillosus ATCC 29799] Length = 214 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E CI C+ C VCPV+C G I C+ CG C CPV A++ Sbjct: 155 IIPEKCIGCQG--CRSVCPVNCIS-GTIPRNIDTAHCLHCGNCLSICPVGAVE 204 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 EN I P++CI C C CPV+ I Sbjct: 150 ENGYRIIPEKCIGCQGCRSVCPVNCI 175 >gi|325264660|ref|ZP_08131389.1| hydrogenase subunit (ferredoxin) [Clostridium sp. D5] gi|324029952|gb|EGB91238.1| hydrogenase subunit (ferredoxin) [Clostridium sp. D5] Length = 417 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKH-TDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 V E C C++ C C D GE+ L I+PD CI C C C D I Sbjct: 49 VFNEPCEECEYERACQNSCIFDAIEAGEDGKLFINPDLCIGCEACIEACKTDKI 102 >gi|299771076|ref|YP_003733102.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter sp. DR1] gi|298701164|gb|ADI91729.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter sp. DR1] Length = 263 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 87 IREDECIGCTKCISACPVDAI 107 >gi|298675341|ref|YP_003727091.1| methyl-viologen-reducing hydrogenase delta subunit [Methanohalobium evestigatum Z-7303] gi|298288329|gb|ADI74295.1| methyl-viologen-reducing hydrogenase delta subunit [Methanohalobium evestigatum Z-7303] Length = 789 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V T+ C C C +VC + + C CG C CP DAI + Sbjct: 573 AFVDTDKCTGCG--ICQDVCKFGKIKLYNHKAEVDELSCHGCGSCSAACPEDAIYMRNQT 630 Query: 62 GLELWLKINSEY 73 ++ +I + Sbjct: 631 DAQIHSQIEAAL 642 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 19/82 (23%) Query: 3 YVVTENCILCKHTDCVEVCPVD---CFYEG---------------ENFLAIHPDECIDCG 44 YV + C C +C VCPV+ F G I+ + C+ CG Sbjct: 238 YVSEDKCKGCI-EECSSVCPVEISNPFDYGIGKIKAISMPFPQAVPQCAYINDEYCVGCG 296 Query: 45 VCEPECPVDAIKPDTEPGLELW 66 +C CP DA+ + + + Sbjct: 297 LCRQVCPADAVDYEQKEEEFSF 318 >gi|330007988|ref|ZP_08306132.1| electron transport protein HydN [Klebsiella sp. MS 92-3] gi|328535262|gb|EGF61753.1| electron transport protein HydN [Klebsiella sp. MS 92-3] Length = 175 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP + F+ + + CI C C CP A++ P + Sbjct: 55 ATACRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRH 114 >gi|324111349|gb|EGC05331.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] gi|325496235|gb|EGC94094.1| hydrogenase 3, Fe-S subunit [Escherichia fergusonii ECD227] Length = 203 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|308051341|ref|YP_003914907.1| thiosulfate reductase subunit beta [Ferrimonas balearica DSM 9799] gi|307633531|gb|ADN77833.1| thiosulfate reductase beta subunit [Ferrimonas balearica DSM 9799] Length = 190 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 +C C++ CV VCP Y GE+ + I D+C+ C C CP I P+T + Sbjct: 59 SCEQCENAPCVHVCPTGAAYVGEDGIVSIKEDKCVGCLYCVAACPYKVRFINPETRVPDK 118 >gi|295103163|emb|CBL00707.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Faecalibacterium prausnitzii SL3/3] Length = 395 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVD 53 V C C T C ++CP +C EG + ++ D+CI CG+CE CP Sbjct: 7 VESECCGC--TACEQICPRNCIQMRKNEEGFLYPVVNNDKCIKCGLCEKVCPFG 58 >gi|300779506|ref|ZP_07089364.1| ferredoxin [Chryseobacterium gleum ATCC 35910] gi|300505016|gb|EFK36156.1| ferredoxin [Chryseobacterium gleum ATCC 35910] Length = 299 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E C + CV +CPV+ E + L + D CI CGVCEPECP +AI Sbjct: 23 ERC--EGFSHCVNICPVEALTLVEGYVNEILNIRALYVQLDTCIMCGVCEPECPTEAI 78 >gi|168230913|ref|ZP_02655971.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235884|ref|ZP_02660942.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242582|ref|ZP_02667514.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194442481|ref|YP_002042094.1| formate hydrogenlyase subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451115|ref|YP_002046813.1| formate hydrogenlyase subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471624|ref|ZP_03077608.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735766|ref|YP_002115805.1| formate hydrogenlyase subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247841|ref|YP_002147750.1| formate hydrogenlyase subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265508|ref|ZP_03165582.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204928192|ref|ZP_03219392.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238909619|ref|ZP_04653456.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194401144|gb|ACF61366.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409419|gb|ACF69638.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457988|gb|EDX46827.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711268|gb|ACF90489.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197211544|gb|ACH48941.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243763|gb|EDY26383.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290921|gb|EDY30275.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204322514|gb|EDZ07711.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205334452|gb|EDZ21216.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338150|gb|EDZ24914.1| formate hydrogenlyase, subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|91212084|ref|YP_542070.1| formate hydrogenlyase subunit 2 [Escherichia coli UTI89] gi|117624956|ref|YP_853944.1| hydrogenase 3, Fe-S subunit [Escherichia coli APEC O1] gi|218559714|ref|YP_002392627.1| hydrogenase 3, Fe-S subunit [Escherichia coli S88] gi|237706652|ref|ZP_04537133.1| hydrogenase 3 [Escherichia sp. 3_2_53FAA] gi|91073658|gb|ABE08539.1| formate hydrogenlyase subunit 2 [Escherichia coli UTI89] gi|115514080|gb|ABJ02155.1| hydrogenase 3, Fe-S subunit [Escherichia coli APEC O1] gi|218366483|emb|CAR04235.1| hydrogenase 3, Fe-S subunit [Escherichia coli S88] gi|226899692|gb|EEH85951.1| hydrogenase 3 [Escherichia sp. 3_2_53FAA] gi|294489596|gb|ADE88352.1| formate hydrogenlyase, subunit B [Escherichia coli IHE3034] gi|307625705|gb|ADN70009.1| hydrogenase 3, Fe-S subunit [Escherichia coli UM146] gi|315289279|gb|EFU48674.1| 4Fe-4S binding domain protein [Escherichia coli MS 110-3] gi|323951057|gb|EGB46933.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323957064|gb|EGB52789.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] Length = 203 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|262368735|ref|ZP_06062064.1| electron transport complex protein [Acinetobacter johnsonii SH046] gi|262316413|gb|EEY97451.1| electron transport complex protein [Acinetobacter johnsonii SH046] Length = 264 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ +I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHSILTDLCTGCELCIPPCPVDCI 137 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 87 IREDECIGCTKCISACPVDAI 107 >gi|224024973|ref|ZP_03643339.1| hypothetical protein BACCOPRO_01704 [Bacteroides coprophilus DSM 18228] gi|224018209|gb|EEF76207.1| hypothetical protein BACCOPRO_01704 [Bacteroides coprophilus DSM 18228] Length = 462 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 15/71 (21%) Query: 2 TYVVTENCILCKHT--------------DCVEVCPVDCFYEGE-NFLAIHPDECIDCGVC 46 ++ + CI C C E CPV + E N I+ D+CI CG C Sbjct: 146 AHIDHDTCISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEHNIEHINEDKCIYCGKC 205 Query: 47 EPECPVDAIKP 57 CP AI Sbjct: 206 LNACPFGAIFE 216 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP F + I D CI CG+C CP AI Sbjct: 114 YEVSNLCRGCVARSCYMNCPKGAVHFDKKTGQAHIDHDTCISCGICHKSCPYHAIVY 170 >gi|322658911|gb|EFY55165.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|323243568|gb|EGA27587.1| putative dimethyl sulfoxide reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] Length = 142 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ C +VCP ++ ++ F+ ++ + CI C C CP A + Sbjct: 60 AYYLSISCNHCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQY 116 >gi|27904653|ref|NP_777779.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372472|sp|Q89AT9|NUOI_BUCBP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|27904050|gb|AAO26884.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 180 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACGL--CSVVCPVSCISLKKSTLKNNKWYPKFFRINLSRCIFCGLCEEACPTLAIQ 115 Query: 57 PDTEPGLELW 66 ++ L + Sbjct: 116 LISDVELSEY 125 >gi|332879377|ref|ZP_08447074.1| ferredoxin [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682797|gb|EGJ55697.1| ferredoxin [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 318 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+ CP + N I P++C C CE CP AI P + + Sbjct: 223 SCIGCG--KCVKTCPFEAITLNNNLAYIDPEKCKLCRKCEEACPKGAIHAINFPPRKPKV 280 Query: 68 K 68 + Sbjct: 281 E 281 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 14/46 (30%), Gaps = 2/46 (4%) Query: 13 KHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 DCV C + + C CG C CP I+ Sbjct: 147 GGGDCVAACQFGALSINPETGLPEVDEERCTACGACVKTCPRRVIE 192 >gi|227501590|ref|ZP_03931639.1| possible formate dehydrogenase beta subunit [Corynebacterium accolens ATCC 49725] gi|227077615|gb|EEI15578.1| possible formate dehydrogenase beta subunit [Corynebacterium accolens ATCC 49725] Length = 352 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP + E + + D C CG C CP I+ + G Sbjct: 122 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGG 179 >gi|118474328|ref|YP_891343.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413554|gb|ABK81974.1| hydrogenase-3 small subunit [Campylobacter fetus subsp. fetus 82-40] Length = 211 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ C C C VCP ++ +H CI C +C CP AI D+ Sbjct: 49 VMPNQCRQCDDAPCALVCPSSALRNENGYVEMHEQLCIGCALCVNACPYGAIHLDS 104 >gi|15679728|ref|NP_276846.1| formate hydrogenlyase, iron-sulfur subunit 2 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622867|gb|AAB86206.1| formate hydrogenlyase, iron-sulfur subunit 2 [Methanothermobacter thermautotrophicus str. Delta H] Length = 143 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 9 CILC--KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C + C+ +CP D E + + I D CI CG+C CPV AI Sbjct: 36 CMHCSPERAPCLNICPEDAIVEVDGAVVILEDRCIGCGLCRDACPVGAI 84 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG--VCEPECPVDAIKPDTEP 61 + CI C C + CPV E +A+ D CID +C CP A+ +E Sbjct: 67 DRCIGCGL--CRDACPVGAITLNERGVAVKCDLCIDRDKPLCVMVCPKGALSESSED 121 >gi|303239632|ref|ZP_07326157.1| hydrogenase large subunit domain protein [Acetivibrio cellulolyticus CD2] gi|302592803|gb|EFL62526.1| hydrogenase large subunit domain protein [Acetivibrio cellulolyticus CD2] Length = 446 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I + CIDCG C CP A Sbjct: 13 EKCKGC--TNCIKRCPTEAIRVRKGKARIIAERCIDCGECIRVCPYHA 58 >gi|238751995|ref|ZP_04613480.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] gi|238709829|gb|EEQ02062.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia rohdei ATCC 43380] Length = 205 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ C C CV CP + E + + ++ D C+ C CE CP A + D Sbjct: 59 SYYLSIACNHCSSPTCVTGCPTGAMHKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFDA 118 Query: 60 EPGL 63 L Sbjct: 119 RKKL 122 >gi|255324416|ref|ZP_05365533.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Corynebacterium tuberculostearicum SK141] gi|311740730|ref|ZP_07714557.1| 4Fe-4S ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] gi|255298322|gb|EET77622.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Corynebacterium tuberculostearicum SK141] gi|311304250|gb|EFQ80326.1| 4Fe-4S ferredoxin [Corynebacterium pseudogenitalium ATCC 33035] Length = 352 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C H C++VCP + E + + D C CG C CP I+ + G Sbjct: 122 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGG 179 >gi|170026045|ref|YP_001722550.1| putative oxidoreductase Fe-S binding subunit [Yersinia pseudotuberculosis YPIII] gi|169752579|gb|ACA70097.1| glutamate synthase, small subunit [Yersinia pseudotuberculosis YPIII] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNSIQVIQEKCIGCKTCMIACPFG 100 >gi|218778463|ref|YP_002429781.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759847|gb|ACL02313.1| Sulfite reduction-associated complex , DsrO [Desulfatibacillum alkenivorans AK-01] Length = 271 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Query: 5 VTEN-----CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 VT+N C C++ CV VCP ++ E+ + I CI C C CP + + Sbjct: 124 VTQNEVLVLCNQCENPACVRVCPTKATFQREDGIVIMDFHRCIGCRFCMAACPYGSRSFN 183 Query: 59 TEPGLELWLKINSEYATQWPNITTKK 84 + L+IN E+ T+ + K Sbjct: 184 FKDPRIASLEINPEFPTRMKGVVEKC 209 >gi|49658944|emb|CAF28571.1| putative oxidoreductase [Yersinia pseudotuberculosis] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNSIQVIQEKCIGCKTCMIACPFG 100 >gi|153948456|ref|YP_001402638.1| oxidoreductase Fe-S binding subunit [Yersinia pseudotuberculosis IP 31758] gi|152959951|gb|ABS47412.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pseudotuberculosis IP 31758] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNSIQVIQEKCIGCKTCMIACPFG 100 >gi|332971171|gb|EGK10135.1| NADH-quinone oxidoreductase subunit I [Psychrobacter sp. 1501(2011)] Length = 182 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVACISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L +++ N Y + I+ + Sbjct: 118 LTPDFELGEYVRQNLVYEKEHLLISGPGKYPD 149 >gi|313887911|ref|ZP_07821590.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846077|gb|EFR33459.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 305 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C + CP D + N +I D+CI+CG+C +CP AI + Sbjct: 217 CIGCG--ICEKNCPKDAIHVENNLASIDYDKCINCGICVSKCPTGAIYCEYPE 267 Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 16/40 (40%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 C CV VC D + + ++C+ C C CP Sbjct: 144 CGGGTCVSVCEFDAIHMVNGVAVVDKEKCVACMKCINICP 183 >gi|283853654|ref|ZP_06370887.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283570956|gb|EFC18983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 583 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C C C+ CPV EG + P+ CI CG C CP A Sbjct: 8 YTIETECQDC--YRCLRQCPVKAIQVEGGRATVV-PELCIACGQCVAACPSHA 57 >gi|119873469|ref|YP_931476.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674877|gb|ABL89133.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 282 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 C C++ CV CP + + D CI C C CP +A+ D Sbjct: 46 CNHCENAPCVNSCPTGALRHNPETGIVQLDKDLCIGCRACTRACPYNAVYID 97 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 24/71 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 + CI C C CP + + I P D+C C C CP Sbjct: 77 DLCIGC--RACTRACPYNA-------VYIDPRTNKADKCTFCEHLVYSGLLPACVAACPT 127 Query: 53 DA-IKPDTEPG 62 A I D E Sbjct: 128 GARIFGDIEDP 138 >gi|78043320|ref|YP_359720.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995435|gb|ABB14334.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 349 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 K CV VCP + ++ +AI +EC +CG C+ CP AI Sbjct: 29 KCGKCVTVCPANAIFKDGEKIAIKKEECTNCGFCKAVCPTGAI 71 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 V+ E C C C +CP E L C++C +C CP Sbjct: 240 VIGE-CNGCGV--CERLCPTGALRLKEGELTFKAHLCLNCSLCVESCP 284 >gi|89893344|ref|YP_516831.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219666616|ref|YP_002457051.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89332792|dbj|BAE82387.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219536876|gb|ACL18615.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 189 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVD 53 ++ C C++ +C+ VCPV + + E+ + IH E CI C +C CP D Sbjct: 54 FISVACNHCQNPECLRVCPVKAYTKREDGIVIHDQERCIGCKLCTMACPYD 104 >gi|304316578|ref|YP_003851723.1| NADH dehydrogenase (quinone) [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778080|gb|ADL68639.1| NADH dehydrogenase (quinone) [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 596 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 E C C C + CP + I D+CI CG C +CP DAI Sbjct: 546 EKCKGCG--ICAKNCPTNAISGKVKQPHVIDQDKCIKCGTCMDKCPFDAIY 594 Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I P++C CG+C CP +AI Sbjct: 530 CPAG-VCQALLRFRIDPEKCKGCGICAKNCPTNAI 563 >gi|218547768|ref|YP_002381559.1| hydrogenase 3, Fe-S subunit [Escherichia fergusonii ATCC 35469] gi|306812398|ref|ZP_07446596.1| hydrogenase 3, Fe-S subunit [Escherichia coli NC101] gi|331648442|ref|ZP_08349530.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli M605] gi|218355309|emb|CAQ87916.1| hydrogenase 3, Fe-S subunit [Escherichia fergusonii ATCC 35469] gi|222034418|emb|CAP77160.1| Formate hydrogenlyase subunit 2 [Escherichia coli LF82] gi|305854436|gb|EFM54874.1| hydrogenase 3, Fe-S subunit [Escherichia coli NC101] gi|312947253|gb|ADR28080.1| hydrogenase 3, Fe-S subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315298788|gb|EFU58042.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] gi|320194862|gb|EFW69491.1| Formate hydrogenlyase subunit 2 [Escherichia coli WV_060327] gi|323188862|gb|EFZ74147.1| hydrogenase-4 component A [Escherichia coli RN587/1] gi|330908755|gb|EGH37269.1| formate hydrogenlyase subunit 2 [Escherichia coli AA86] gi|331042189|gb|EGI14331.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli M605] Length = 203 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|167044386|gb|ABZ09063.1| putative ABC transporter [uncultured marine crenarchaeote HF4000_APKG6D3] Length = 592 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCI--LCKHTDCVEVCPV-----DCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C +C++ CPV DC E N I D C CG+C CP +AI Sbjct: 11 ELCQPKKCG-LECIKYCPVNKSGADCIVLNEETNKALIDEDICNGCGICVKVCPFEAI 67 >gi|167043306|gb|ABZ08011.1| putative ABC transporter [uncultured marine crenarchaeote HF4000_ANIW141M18] Length = 592 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCI--LCKHTDCVEVCPV-----DCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C +C++ CPV DC E N I D C CG+C CP +AI Sbjct: 11 ELCQPKKCG-LECIKYCPVNKSGADCIVLNEETNKALIDEDICNGCGICVKVCPFEAI 67 >gi|295106199|emb|CBL03742.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 206 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C +VCP ++ +++ D+C+ CG C CP +A K D Sbjct: 60 SYPLSLSCNHCDDPACTKVCPTGAMHKDAETGLVSVDADKCVGCGYCHMACPYNAPKVDR 119 Query: 60 EPGL 63 G Sbjct: 120 SKGH 123 >gi|294339944|emb|CAZ88307.1| putative Iron-sulfur cluster ferredoxin [Thiomonas sp. 3As] Length = 275 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D + G Sbjct: 72 SCLHCEEPPCVPVCPTGASYKRQEDGIVLVDSDKCIGCKYCSWACPYGAREYDEDRG 128 >gi|257790376|ref|YP_003180982.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488822|ref|ZP_07947354.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833713|ref|ZP_08166128.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474273|gb|ACV54593.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912076|gb|EFV33653.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485253|gb|EGC87723.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 193 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 Y + C C+ CV VCP + + + + + ++CI C C CP Sbjct: 53 YFLPTMCQQCQDAPCVNVCPTGASYRDADGMVLVDKEKCIGCKYCMMACPYG 104 >gi|254172052|ref|ZP_04878728.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] gi|214033948|gb|EEB74774.1| 4Fe-4S cluster-binding protein [Thermococcus sp. AM4] Length = 174 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 NC C C+ VCP Y E+ IH ++CI C C CP Sbjct: 47 NCKHCDDAPCLRVCPTHAIYRDEDGAVRIHEEKCIGCLACLQVCPYGVPFY 97 >gi|206576514|ref|YP_002236930.1| formate hydrogenlyase, subunit B [Klebsiella pneumoniae 342] gi|288933886|ref|YP_003437945.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] gi|206565572|gb|ACI07348.1| formate hydrogenlyase, subunit B [Klebsiella pneumoniae 342] gi|288888615|gb|ADC56933.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QMCHHCEDAPCATVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|158520200|ref|YP_001528070.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509026|gb|ABW65993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 386 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 10/59 (16%) Query: 6 TENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TE C LC CV+ CPV+ Y +NF+A++ EC+ CGVC C +AI+ Sbjct: 304 TEECNLC--MACVDKCPVNALYHHKPHKDDGSDNFIALNESECLGCGVCVMACDNEAIQ 360 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 34 AIHPDECIDCGVCEPECPVDAIK---PDTEPGLELWLKIN 70 I +EC C C +CPV+A+ P + G + ++ +N Sbjct: 301 VIKTEECNLCMACVDKCPVNALYHHKPHKDDGSDNFIALN 340 >gi|149912039|ref|ZP_01900632.1| Electron transport complex protein rnfB [Moritella sp. PE36] gi|149804900|gb|EDM64935.1| Electron transport complex protein rnfB [Moritella sp. PE36] Length = 182 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 ++ E+CI C T C++ CPVD + + D C C +C CP D I + Sbjct: 108 ARIIEEDCIGC--TKCIQACPVDAIAGATRAMHTVIVDSCTGCKLCVAPCPTDCIVMEPV 165 Query: 61 PGLELW 66 W Sbjct: 166 QAAWKW 171 >gi|148270498|ref|YP_001244958.1| NADH dehydrogenase (quinone) [Thermotoga petrophila RKU-1] gi|147736042|gb|ABQ47382.1| NADH dehydrogenase (quinone) [Thermotoga petrophila RKU-1] Length = 626 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C C C CP + E I+ ++C+ CG+C +CP AI+ Sbjct: 571 YVINPDICKGCGL--CARSCPQNAITGERGKPYTINQEKCVKCGLCASKCPFKAIE 624 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+PD C CG+C CP +AI + Sbjct: 559 ECPSG-MCTAFKKYVINPDICKGCGLCARSCPQNAITGE 596 >gi|157370665|ref|YP_001478654.1| electron transport protein HydN [Serratia proteamaculans 568] gi|157322429|gb|ABV41526.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Serratia proteamaculans 568] Length = 180 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + + + CI C C CP A++ T P Sbjct: 58 CRQCEDAPCSNVCPNGAISRTNGMVLVMQERCIGCKTCVVACPYGAMEVITRP 110 >gi|33519937|ref|NP_878769.1| NADH dehydrogenase subunit I [Candidatus Blochmannia floridanus] gi|81666916|sp|Q7VRV9|NUOI_BLOFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|33504283|emb|CAD83175.1| NADH dehydrogenase I chain I [Candidatus Blochmannia floridanus] Length = 181 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C EG F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVSCPVGCISLKKSENSEGRWYPEFFRINFSRCIFCGMCEEACPTAAIQ 116 Query: 57 PDTEPGLELW 66 ++ + + Sbjct: 117 LISDFEMSDY 126 >gi|323701707|ref|ZP_08113378.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533243|gb|EGB23111.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 92 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 Y +T C C C +VCP Y E+ I+ C CG C CP AI +T+ Sbjct: 7 YFITNKCKNC--AQCQDVCPEKAIYAAEDKYCINDARCNGCGSCVEICPEQAIVKETD-- 62 Query: 63 LELWLKINSE 72 + IN E Sbjct: 63 --HFRIINRE 70 >gi|320196305|gb|EFW70929.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli WV_060327] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|261821988|ref|YP_003260094.1| cytochrome C nitrite reductase, Fe-S protein [Pectobacterium wasabiae WPP163] gi|261606001|gb|ACX88487.1| cytochrome c nitrite reductase, Fe-S protein [Pectobacterium wasabiae WPP163] Length = 223 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C H CV+VCP F + + + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYQVRFIHPQTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|218701216|ref|YP_002408845.1| hydrogenase 3, Fe-S subunit [Escherichia coli IAI39] gi|218371202|emb|CAR19033.1| hydrogenase 3, Fe-S subunit [Escherichia coli IAI39] Length = 203 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|153002602|ref|YP_001368283.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|151367220|gb|ABS10220.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] Length = 553 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALHSYLNKVVSRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C +C CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 ++++ ++C C C CP A++ + +++ N Sbjct: 415 KVSVNVEKCTMCMSCVAICPTVALQDGGDKPALHFIEQN 453 >gi|51894428|ref|YP_077119.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] gi|51858117|dbj|BAD42275.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] Length = 194 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C CPV + + + + + CI C C CP A++ Sbjct: 62 CRHCEDAPCANACPVGAITQKDGIIDVDQETCIGCKTCVLACPFGAME 109 >gi|85706216|ref|ZP_01037311.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] gi|85669380|gb|EAQ24246.1| iron-sulfur cluster-binding protein [Roseovarius sp. 217] Length = 260 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDAAEG 143 >gi|331696235|ref|YP_004332474.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326950924|gb|AEA24621.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudonocardia dioxanivorans CB1190] Length = 286 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP E+ + D C CG C P CP I Sbjct: 105 SDVCKHCTHAACLDVCPTGSLIRTEHGTVLVQEDICNGCGYCIPACPYGVI 155 >gi|302184712|ref|ZP_07261385.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae 642] Length = 291 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-DECTGCDLCIAPCPVDCIE 137 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C C+ CPVDC Sbjct: 113 MHTVIIDECTGCDL--CIAPCPVDCIEM 138 >gi|217075100|gb|ACJ85910.1| unknown [Medicago truncatula] Length = 222 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|168208932|ref|ZP_02634557.1| F420H2:quinone oxidoreductase [Clostridium perfringens B str. ATCC 3626] gi|170712785|gb|EDT24967.1| F420H2:quinone oxidoreductase [Clostridium perfringens B str. ATCC 3626] Length = 389 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 E C +C C+ +CP +C E N+ I+ +CIDCG C CPV Sbjct: 8 ERCTIC--QACINICPKECIKLDFVKEEFNYPIINKIKCIDCGACYKVCPV 56 >gi|163740485|ref|ZP_02147879.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386343|gb|EDQ10718.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis 2.10] Length = 264 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ D CI CG+C CP A + D G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEDNCIGCGLCAWSCPYGARELDLAEG 143 >gi|51594748|ref|YP_068939.1| oxidoreductase Fe-S binding subunit [Yersinia pseudotuberculosis IP 32953] gi|186893755|ref|YP_001870867.1| putative oxidoreductase Fe-S binding subunit [Yersinia pseudotuberculosis PB1/+] gi|51588030|emb|CAH19636.1| putative oxidoreductase [Yersinia pseudotuberculosis IP 32953] gi|186696781|gb|ACC87410.1| glutamate synthase, small subunit [Yersinia pseudotuberculosis PB1/+] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNSIQVIQEKCIGCKTCMIACPFG 100 >gi|238796520|ref|ZP_04640028.1| Electron transport complex protein rnfB [Yersinia mollaretii ATCC 43969] gi|238719725|gb|EEQ11533.1| Electron transport complex protein rnfB [Yersinia mollaretii ATCC 43969] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|320180854|gb|EFW55777.1| Formate hydrogenlyase subunit 2 [Shigella boydii ATCC 9905] Length = 203 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|294053608|ref|YP_003547266.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Coraliomargarita akajimensis DSM 45221] gi|293612941|gb|ADE53096.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Coraliomargarita akajimensis DSM 45221] Length = 309 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CV+VCPV+ + E + +A+ + CI C CE CP A + + Sbjct: 164 CQQCDNPPCVDVCPVEATWKEKDGIVAVDYNWCIGCRYCEAACPYHARRFNWTKPQIPKE 223 Query: 68 KIN 70 ++N Sbjct: 224 EVN 226 >gi|184157307|ref|YP_001845646.1| NADH:ubiquinone oxidoreductase subunit RnfB [Acinetobacter baumannii ACICU] gi|332873434|ref|ZP_08441387.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6014059] gi|183208901|gb|ACC56299.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter baumannii ACICU] gi|322507192|gb|ADX02646.1| RnfB [Acinetobacter baumannii 1656-2] gi|323517170|gb|ADX91551.1| NADH:ubiquinone oxidoreductase, subunit RnfB [Acinetobacter baumannii TCDC-AB0715] gi|332738380|gb|EGJ69254.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6014059] Length = 263 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCINACPVDAI 107 >gi|6226880|sp|P80269|NDUS8_SOLTU RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=Complex I-28.5kD; Short=CI-28.5kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|668985|emb|CAA59062.1| NADH dehydrogenase [Solanum tuberosum] Length = 229 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 184 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 128 ERCIACKLCEAICPAQAITIEAEERED 154 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 169 CIYCGF--CQEACPVDAIVEGPNF 190 >gi|332093036|gb|EGI98102.1| protein aegA [Shigella boydii 3594-74] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|330912249|gb|EGH40759.1| glutamate synthase [NADPH] small chain [Escherichia coli AA86] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|313681563|ref|YP_004059301.1| 4fe-4S ferredoxin [Sulfuricurvum kujiense DSM 16994] gi|313154423|gb|ADR33101.1| 4Fe-4S ferredoxin [Sulfuricurvum kujiense DSM 16994] Length = 84 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ + CI C C E CP+D EG+ I PD C +C C CPVD Sbjct: 1 MPLLIVDECIACD--ACREECPMDAIEEGDPIYIIDPDRCTECVGTYDEPACIAVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDKD 64 >gi|269217314|ref|ZP_06161168.1| thiosulfate reductase electron transport protein phsb [Slackia exigua ATCC 700122] gi|269129451|gb|EEZ60536.1| thiosulfate reductase electron transport protein phsb [Slackia exigua ATCC 700122] Length = 179 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V+ C+ C+ C VCP Y E+ + I CI C C CP A Sbjct: 53 VIPSQCMHCEDAPCQTVCPTGATYTNEDGIVCIDHGRCIGCKYCMAACPYRA 104 >gi|170289107|ref|YP_001739345.1| NADH dehydrogenase (quinone) [Thermotoga sp. RQ2] gi|170176610|gb|ACB09662.1| NADH dehydrogenase (quinone) [Thermotoga sp. RQ2] Length = 626 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C C C CP + E I+ ++C+ CG+C +CP AI+ Sbjct: 571 YVINPDICKGCGL--CARSCPQNAITGERGKPYTINQEKCVKCGLCASKCPFKAIE 624 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+PD C CG+C CP +AI + Sbjct: 559 ECPSG-MCTAFKKYVINPDICKGCGLCARSCPQNAITGE 596 >gi|148974078|ref|ZP_01811611.1| tetrathionate reductase, subunit B [Vibrionales bacterium SWAT-3] gi|145965775|gb|EDK31023.1| tetrathionate reductase, subunit B [Vibrionales bacterium SWAT-3] Length = 263 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + C++VCPV ++ E+ + + + C+ C C CP DA Sbjct: 112 CNHCDNAPCIKVCPVQATFQREDGIVMVDNERCVACAYCVQACPYDA 158 >gi|126460103|ref|YP_001056381.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249824|gb|ABO08915.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 264 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C VCPVD E + I D+CI CG C CP + + Sbjct: 75 CFHCYSAVCALVCPVDAHIVTEYGAVVIQTDKCIGCGRCAAVCPYGVPRQGAD 127 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 8/58 (13%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDAIKP 57 T+ CI C C VCP +G + D C+D C CP A+K Sbjct: 104 TDKCIGCG--RCAAVCPYGVPRQGADRRYRKCDLCVDRAAEGKPPACVEACPTGALKF 159 >gi|254229650|ref|ZP_04923061.1| Fe-S-cluster-containing hydrogenase components 1 [Vibrio sp. Ex25] gi|262393807|ref|YP_003285661.1| tetrathionate reductase subunit B [Vibrio sp. Ex25] gi|151937849|gb|EDN56696.1| Fe-S-cluster-containing hydrogenase components 1 [Vibrio sp. Ex25] gi|262337401|gb|ACY51196.1| tetrathionate reductase subunit B [Vibrio sp. Ex25] Length = 255 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C++ CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCENPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|320200025|gb|EFW74614.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli EC4100B] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|312967752|ref|ZP_07781967.1| protein aegA [Escherichia coli 2362-75] gi|312287949|gb|EFR15854.1| protein aegA [Escherichia coli 2362-75] Length = 636 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|238896181|ref|YP_002920917.1| hydrogenase 3 iron-sulfur subunit [Klebsiella pneumoniae NTUH-K2044] gi|238548499|dbj|BAH64850.1| hydrogenase 3 iron-sulfur subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 202 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QMCHHCEDAPCATVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|198275297|ref|ZP_03207828.1| hypothetical protein BACPLE_01456 [Bacteroides plebeius DSM 17135] gi|198271880|gb|EDY96150.1| hypothetical protein BACPLE_01456 [Bacteroides plebeius DSM 17135] Length = 491 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y V+ C C C CP F + I D+CI CG+C CP AI Sbjct: 114 YEVSNLCRGCVARSCYMNCPKGAVHFNKKTGQAQIDHDKCISCGICHKSCPYHAIVY 170 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 15/66 (22%) Query: 7 ENCILCKHT--------------DCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + CI C C E CPV + E+++ I +CI CG C CP Sbjct: 151 DKCISCGICHKSCPYHAIVYIPVPCEEACPVKAISKDEHYIEHIDESKCIYCGKCLNACP 210 Query: 52 VDAIKP 57 AI Sbjct: 211 FGAIFE 216 >gi|170679927|ref|YP_001743666.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] gi|170517645|gb|ACB15823.1| dimethylsulfoxide reductase, B subunit [Escherichia coli SMS-3-5] Length = 205 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C C +VCP ++ E+ F+ + D CI C CP A + + E Sbjct: 60 AYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAE 119 Query: 61 PGL 63 G Sbjct: 120 KGH 122 >gi|91202589|emb|CAJ72228.1| similar to NAD(P) oxidoreductase, FAD-containing subunit [Candidatus Kuenenia stuttgartiensis] Length = 566 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 23/73 (31%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---------------------EGENFLAIHPDECID 42 + E CILC C++VCP +C E + + I ++CI Sbjct: 486 FIDEKCILCGG--CIDVCPYNCISMVSRENISLPDSLRNEENIPEEWDAAMIIDEEKCIR 543 Query: 43 CGVCEPECPVDAI 55 CG+C CP AI Sbjct: 544 CGLCVKRCPTRAI 556 >gi|194426242|ref|ZP_03058797.1| protein aegA [Escherichia coli B171] gi|194415550|gb|EDX31817.1| protein aegA [Escherichia coli B171] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|330818356|ref|YP_004362061.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia gladioli BSR3] gi|327370749|gb|AEA62105.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia gladioli BSR3] Length = 90 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHAETQ 69 >gi|289626586|ref|ZP_06459540.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647568|ref|ZP_06478911.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867251|gb|EGH01960.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 290 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|212224166|ref|YP_002307402.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermococcus onnurineus NA1] gi|212009123|gb|ACJ16505.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermococcus onnurineus NA1] Length = 212 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C C+ C+E CP E F+ ++ ++CI C +C CP K + E Sbjct: 65 VPMRCQHCEDAPCMEACPTGAISRTKEGFVVLNANKCIGCLMCVMACPFGHPKFEPE 121 >gi|157377178|ref|YP_001475778.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319552|gb|ABV38650.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 190 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + I D+C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIVTIKEDKCVGCMYCVAACPY 104 >gi|114564835|ref|YP_752349.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114336128|gb|ABI73510.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 220 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +Y + +C C CV+ CP + E+ L +H D CI C C CP DA + D Sbjct: 77 SYYTSISCNHCNEPVCVKACPTGAMHKRREDGLVLVHTDLCIGCNSCAEACPYDAPQLD 135 >gi|320325636|gb|EFW81698.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327081|gb|EFW83095.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330876899|gb|EGH11048.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 290 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|167771184|ref|ZP_02443237.1| hypothetical protein ANACOL_02542 [Anaerotruncus colihominis DSM 17241] gi|167666603|gb|EDS10733.1| hypothetical protein ANACOL_02542 [Anaerotruncus colihominis DSM 17241] Length = 501 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +V E C C T C + CPV E + ++C +CGVC C AI ++ Sbjct: 3 IVNEKCKGC--TICSKNCPVGAIEMVERKAVVSAEKCCECGVCTRVCKFGAISKPSDVSD 60 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + I ++C C +C CPV AI+ Sbjct: 1 MVIVNEKCKGCTICSKNCPVGAIE 24 >gi|198243613|ref|YP_002216814.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938129|gb|ACH75462.1| protein AegA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 181 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|150399419|ref|YP_001323186.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150012122|gb|ABR54574.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 132 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV CPV + + + + DECI C C CPV+AIK Sbjct: 82 CIDCG--SCVVHCPVGALSVDSDYKILLDEDECIGCKNCAKVCPVNAIK 128 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Query: 26 FYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTE 60 + E E+ I + CIDCG C CPV A+ D++ Sbjct: 65 YGEAEDIPKIIQKDDNLCIDCGSCVVHCPVGALSVDSD 102 >gi|159899734|ref|YP_001545981.1| NADH-quinone oxidoreductase subunit I [Herpetosiphon aurantiacus ATCC 23779] gi|159892773|gb|ABX05853.1| NADH-quinone oxidoreductase, chain I [Herpetosiphon aurantiacus ATCC 23779] Length = 168 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------------EGENF---LAIHPDECIDCGVCEPEC 50 E CI C + C CP D Y GE I+ CI CG CE C Sbjct: 53 ERCIGC--SLCAAACPADAIYVVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDAC 110 Query: 51 PVDAIKPDTEPGLELW 66 P +AI + + L + Sbjct: 111 PTNAIVLEHQYELAFY 126 >gi|116051507|ref|YP_789657.1| electron transport complex protein RnfB [Pseudomonas aeruginosa UCBPP-PA14] gi|313108854|ref|ZP_07794838.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa 39016] gi|122260647|sp|Q02QX9|RNFB_PSEAB RecName: Full=Electron transport complex protein rnfB gi|115586728|gb|ABJ12743.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa UCBPP-PA14] gi|310881340|gb|EFQ39934.1| putative NADH:ubiquinone oxidoreductase, subunit RnfB [Pseudomonas aeruginosa 39016] Length = 188 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ +T Sbjct: 106 AYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMRET 163 Query: 60 EPGLELW 66 + W Sbjct: 164 PDDVRHW 170 Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 P+D E I ECI C C CPVDAI Sbjct: 94 PLDAAEETPPRVAYIREAECIGCTKCIQACPVDAI 128 >gi|313679324|ref|YP_004057063.1| phenylacetyl-CoA:acceptor oxidoreductase padc subunit [Oceanithermus profundus DSM 14977] gi|313152039|gb|ADR35890.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Oceanithermus profundus DSM 14977] Length = 298 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C CV VCPV ++ ++ + I D CI C C CP A Sbjct: 130 PCMQCDKPPCVPVCPVGATWKRKDGIVEIDYDACIGCRYCITACPYSA 177 >gi|300906565|ref|ZP_07124256.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 84-1] gi|301303043|ref|ZP_07209170.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 124-1] gi|300401604|gb|EFJ85142.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 84-1] gi|300841707|gb|EFK69467.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 124-1] gi|315256768|gb|EFU36736.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 85-1] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|256024604|ref|ZP_05438469.1| putative oxidoreductase Fe-S binding subunit [Escherichia sp. 4_1_40B] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|218887556|ref|YP_002436877.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758510|gb|ACL09409.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 188 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIK 56 C C++ C+E CPV + + E+ + +H D CI CG C CP A K Sbjct: 58 ACNHCENPVCLEQCPVKAYTKREDGIVVHDQDACIGCGNCVRSCPYGAPK 107 >gi|206890889|ref|YP_002248948.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742827|gb|ACI21884.1| NADH-quinone oxidoreductase, chain i subfamily, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 187 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGEN---FLAIHPDECIDCGVCEPECPVDAI 55 E C+ C T C +VCP C Y G I CI CG CE CPV+AI Sbjct: 59 ERCVAC--TKCAQVCPSQCIYIDYSINPETGARVLTKYEIDALRCIFCGYCEEVCPVNAI 116 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 4/41 (9%) Query: 22 PVDCFYEGENFLAIHPDE----CIDCGVCEPECPVDAIKPD 58 P++ + G + P+ C+ C C CP I D Sbjct: 39 PLEDGFRGRHAFVRDPETGKERCVACTKCAQVCPSQCIYID 79 >gi|163744893|ref|ZP_02152253.1| 4Fe-4S binding domain protein [Oceanibulbus indolifex HEL-45] gi|161381711|gb|EDQ06120.1| 4Fe-4S binding domain protein [Oceanibulbus indolifex HEL-45] Length = 254 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCDDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGAREMDVAAG 137 >gi|218927545|ref|YP_002345420.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis CO92] gi|115346156|emb|CAL19024.1| putative oxidoreductase [Yersinia pestis CO92] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNRVQVIQEKCIGCKTCMIACPFG 100 >gi|127511178|ref|YP_001092375.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126636473|gb|ABO22116.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 231 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V C C + C +VCPV+ Y+ + + I +ECI C +C CP A + D Sbjct: 84 VPNQCNQCDNPVCTQVCPVEATYKRKEDGIVVIDHEECIHCQLCVDACPYGARRKDESLD 143 >gi|22124513|ref|NP_667936.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis KIM 10] gi|45440350|ref|NP_991889.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis biovar Microtus str. 91001] gi|108809930|ref|YP_653846.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis Antiqua] gi|108813488|ref|YP_649255.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis Nepal516] gi|145600878|ref|YP_001164954.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis Pestoides F] gi|150260614|ref|ZP_01917342.1| putative oxidoreductase [Yersinia pestis CA88-4125] gi|165926688|ref|ZP_02222520.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936436|ref|ZP_02225004.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011879|ref|ZP_02232777.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213982|ref|ZP_02240017.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167419006|ref|ZP_02310759.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423469|ref|ZP_02315222.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469245|ref|ZP_02333949.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis FV-1] gi|229836600|ref|ZP_04456766.1| putative oxidoreductase [Yersinia pestis Pestoides A] gi|229840209|ref|ZP_04460368.1| putative oxidoreductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842290|ref|ZP_04462445.1| putative oxidoreductase [Yersinia pestis biovar Orientalis str. India 195] gi|229903972|ref|ZP_04519085.1| putative oxidoreductase [Yersinia pestis Nepal516] gi|270489042|ref|ZP_06206116.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis KIM D27] gi|294502454|ref|YP_003566516.1| oxidoreductase, Fe-S subunit [Yersinia pestis Z176003] gi|21957308|gb|AAM84187.1|AE013662_1 putative oxidoreductase, Fe-S subunit [Yersinia pestis KIM 10] gi|45435206|gb|AAS60766.1| putative oxidoreductase, Fe-S subunit [Yersinia pestis biovar Microtus str. 91001] gi|108777136|gb|ABG19655.1| oxidoreductase [Yersinia pestis Nepal516] gi|108781843|gb|ABG15901.1| putative oxidoreductase [Yersinia pestis Antiqua] gi|145212574|gb|ABP41981.1| oxidoreductase [Yersinia pestis Pestoides F] gi|149290022|gb|EDM40099.1| putative oxidoreductase [Yersinia pestis CA88-4125] gi|165915552|gb|EDR34161.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165921311|gb|EDR38535.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989238|gb|EDR41539.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166204777|gb|EDR49257.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166963000|gb|EDR59021.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167057639|gb|EDR67385.1| putative anaerobic formate dehydrogenase, iron-sulfur subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679742|gb|EEO75845.1| putative oxidoreductase [Yersinia pestis Nepal516] gi|229690600|gb|EEO82654.1| putative oxidoreductase [Yersinia pestis biovar Orientalis str. India 195] gi|229696575|gb|EEO86622.1| putative oxidoreductase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706284|gb|EEO92292.1| putative oxidoreductase [Yersinia pestis Pestoides A] gi|262360485|gb|ACY57206.1| oxidoreductase, Fe-S subunit [Yersinia pestis D106004] gi|262364431|gb|ACY60988.1| oxidoreductase, Fe-S subunit [Yersinia pestis D182038] gi|270337546|gb|EFA48323.1| putative oxidoreductase Fe-S binding subunit [Yersinia pestis KIM D27] gi|294352913|gb|ADE63254.1| oxidoreductase, Fe-S subunit [Yersinia pestis Z176003] gi|320013793|gb|ADV97364.1| putative oxidoreductase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 671 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP E N + + ++CI C C CP Sbjct: 56 CHHCEDAPCASTCPNGAIVELNNRVQVIQEKCIGCKTCMIACPFG 100 >gi|296137471|ref|YP_003644713.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295797593|gb|ADG32383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 311 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ C+EVCP ++ ++ + I D C CG C CP DA Sbjct: 149 CNHCERPSCIEVCPAGATWQRKDGIVEIDYDLCWGCGACVNACPYDA 195 >gi|242277849|ref|YP_002989978.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120743|gb|ACS78439.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 251 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA 54 T+ C+ C + CV+ CP F + + I CI CG C P CP DA Sbjct: 55 THFQPGGCMHCDNPTCVQACPTGATFKDKTDGTVRIDTSLCIGCGNCMPACPYDA 109 >gi|237798781|ref|ZP_04587242.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021634|gb|EGI01691.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 291 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ CI C T C++ CPVD I +EC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVII-EECTGCDLCVAPCPVDCIEMHP 140 Query: 60 EPGL 63 P Sbjct: 141 LPSA 144 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ E C C CV CPVDC Sbjct: 113 MHTVIIEECTGCDL--CVAPCPVDCIEM 138 >gi|288573057|ref|ZP_06391414.1| Indolepyruvate ferredoxin oxidoreductase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568798|gb|EFC90355.1| Indolepyruvate ferredoxin oxidoreductase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 617 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 22/49 (44%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK+ CP F E I C++CGVC CP AI Sbjct: 563 EVCIGCKYCITSFNCPGLVFDESSKKAYIDERYCVNCGVCMSVCPHGAI 611 >gi|198275773|ref|ZP_03208304.1| hypothetical protein BACPLE_01948 [Bacteroides plebeius DSM 17135] gi|198271402|gb|EDY95672.1| hypothetical protein BACPLE_01948 [Bacteroides plebeius DSM 17135] Length = 321 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C CV+VCP + N I P +C C CE ECP AI Sbjct: 221 CIGCG--KCVKVCPFEAITLENNLAYIDPAKCKSCRKCEMECPQQAI 265 Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVSACQFDAIHMNPETGLPEVDESKCTACGACSKACPRNIIE 189 >gi|253700753|ref|YP_003021942.1| electron transfer flavoprotein subunit alpha [Geobacter sp. M21] gi|251775603|gb|ACT18184.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. M21] Length = 436 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ CI C C VCP++ E I ++CI C C CP A++ Sbjct: 14 ARVIAGKCIACGAR-CQSVCPINGVEMSEQGEPLIETEKCIGCVKCVKACPAGALEMFYT 72 Query: 61 PGL 63 P Sbjct: 73 PEE 75 >gi|163814423|ref|ZP_02205812.1| hypothetical protein COPEUT_00574 [Coprococcus eutactus ATCC 27759] gi|158450058|gb|EDP27053.1| hypothetical protein COPEUT_00574 [Coprococcus eutactus ATCC 27759] Length = 401 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPVD-AIKPDTE 60 ++C C T C +CP D E+ FL + + CI+CG CE CP+ I+ Sbjct: 8 QDCCGC--TACAAICPKDAIIMKEDNEGFLYPTVDKETCINCGACEKVCPIKYPIRQQKR 65 Query: 61 PGLELWLKINSE 72 +++ +E Sbjct: 66 KDDIYYIQCKNE 77 >gi|149176111|ref|ZP_01854727.1| molybdopterin oxidoreductase, iron sulfur subunit [Planctomyces maris DSM 8797] gi|148844978|gb|EDL59325.1| molybdopterin oxidoreductase, iron sulfur subunit [Planctomyces maris DSM 8797] Length = 581 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C C++ CPV+ + + + H D+C C C CP D K ++ G Sbjct: 133 VTTACHHCLDPGCMQACPVNAYEKDPITGIVRHLDDQCFGCQYCTLACPYDVPKYHSKKG 192 >gi|91201122|emb|CAJ74181.1| conserved hypothetical iron sulfur protein [Candidatus Kuenenia stuttgartiensis] Length = 357 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C + CPV GE + I P CI CG C C A+K Sbjct: 196 CTTCGV--CGKWCPVGAIKIGEEYAIIDPQICIGCGECLAVCQFQAVK 241 >gi|118359716|ref|XP_001013096.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Tetrahymena thermophila] gi|89294863|gb|EAR92851.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Tetrahymena thermophila SB210] Length = 324 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C CP +G I +CI CG C+ CPVDAI Sbjct: 222 ERCIACKL--CQSACPARAITIETEPRPDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIV 279 Query: 57 PDTEPGLELWL 67 +L Sbjct: 280 EGPNYEQTAYL 290 >gi|21229366|ref|NP_635288.1| coenzyme F420 hydrogenase subunit beta [Methanosarcina mazei Go1] gi|20907953|gb|AAM32960.1| Coenzyme F420 hydrogenase beta subunit [Methanosarcina mazei Go1] Length = 296 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ ENC+ CK C + C + E+ +I ++CI CG C C DA++ + Sbjct: 166 VLEENCVGCK--RCEKACKMGAIKVIEDKASIDTEKCILCGACIAACRKDALRAE 218 >gi|113968979|ref|YP_732772.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113883663|gb|ABI37715.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 251 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C++ C+ +CP ++ + + + + + C+ CG C CP DA Sbjct: 98 CNHCENPPCIPICPTGATFQRPDGIVVVNNEWCVGCGYCVQACPYDA 144 >gi|315614959|gb|EFU95597.1| uncharacterized protein ygfT [Escherichia coli 3431] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|319795038|ref|YP_004156678.1| 4fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] gi|315597501|gb|ADU38567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus EPS] Length = 276 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D E Sbjct: 136 SCLHCEDPPCVPVCPTGASYKRKEDGIVLVDYDKCIGCKYCAWACPYGARELDEE 190 >gi|300921217|ref|ZP_07137590.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 115-1] gi|300411823|gb|EFJ95133.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 115-1] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|289191767|ref|YP_003457708.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938217|gb|ADC68972.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 163 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 + CI C C+E+CPVD ++ L I ++C+ CG C+ CP +AI Sbjct: 37 DKCISCG--KCIEICPVDAITYSKDGLFIVIDKEKCVFCGRCKKVCPTNAI 85 Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++E C C C+ CP + E + + I ++C CG CE CP++AI Sbjct: 112 ISERCASCLV--CLRNCPFNAIEEYGSKIRIDINKCELCGRCEELCPLNAI 160 >gi|198283943|ref|YP_002220264.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667094|ref|YP_002426577.1| sulfur reductase, iron-sulfur binding subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248464|gb|ACH84057.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519307|gb|ACK79893.1| sulfur reductase, iron-sulfur binding subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 207 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C + CV VCP + E + ++PD C+ C C CP DA P ++ Sbjct: 61 CNHCDNPPCVSVCPTGATWKEANGIVRVNPDICMGCQACAMACPYDARYPADSNDIDK 118 >gi|297619218|ref|YP_003707323.1| Cobyrinic acid ac-diamide synthase [Methanococcus voltae A3] gi|297378195|gb|ADI36350.1| Cobyrinic acid ac-diamide synthase [Methanococcus voltae A3] Length = 318 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C CK C E C D + + + I C CG+CE CPVDAI + E Sbjct: 69 DLCTNCKL--CYEKCRFDAILLDKDENVVIDDLSCEGCGLCEYICPVDAITMEDE 121 >gi|152971571|ref|YP_001336680.1| electron transport protein HydN [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896169|ref|YP_002920905.1| electron transport protein HydN [Klebsiella pneumoniae NTUH-K2044] gi|150956420|gb|ABR78450.1| electron transport protein (formate to hydrogen), Fe-S center [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548487|dbj|BAH64838.1| electron transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 175 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP + F+ + + CI C C CP A++ P + Sbjct: 55 ATACRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRH 114 >gi|281357847|ref|ZP_06244333.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] gi|281315794|gb|EFA99821.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] Length = 614 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIK 56 Y +++ C+ C C+ CPV+C GE + I CI CGVC C A++ Sbjct: 560 YEISDRCVGCGL--CLHRCPVNCIS-GERKMRHRIDQSRCIKCGVCFQTCKFHAVE 612 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 D C+ CG+C CPV+ I + Sbjct: 564 DRCVGCGLCLHRCPVNCISGE 584 >gi|121702465|ref|XP_001269497.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus clavatus NRRL 1] gi|119397640|gb|EAW08071.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus clavatus NRRL 1] Length = 228 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 127 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 184 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 + N+EYAT+ + K++ L + K + Sbjct: 185 ETS----------NAEYATETREELLYNKEKLLANGDKWE 214 >gi|191166003|ref|ZP_03027839.1| protein aegA [Escherichia coli B7A] gi|309793957|ref|ZP_07688382.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 145-7] gi|332280429|ref|ZP_08392842.1| conserved hypothetical protein [Shigella sp. D9] gi|190903951|gb|EDV63664.1| protein aegA [Escherichia coli B7A] gi|308122364|gb|EFO59626.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 145-7] gi|332102781|gb|EGJ06127.1| conserved hypothetical protein [Shigella sp. D9] Length = 644 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|71900626|ref|ZP_00682752.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|71729620|gb|EAO31725.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] Length = 139 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +++ +CI C T C++ CPVD G + + C C +C P CPV+ I+ Sbjct: 82 AWIIEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVECIE 135 >gi|237706667|ref|ZP_04537148.1| electron transporter hydN [Escherichia sp. 3_2_53FAA] gi|226899707|gb|EEH85966.1| electron transporter hydN [Escherichia sp. 3_2_53FAA] Length = 182 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 65 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 117 >gi|196232899|ref|ZP_03131749.1| molybdopterin oxidoreductase [Chthoniobacter flavus Ellin428] gi|196223098|gb|EDY17618.1| molybdopterin oxidoreductase [Chthoniobacter flavus Ellin428] Length = 1259 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 VT C C C+E CPV + + E + H D+CI C C +CP D + Sbjct: 111 TVTTACHHCVEPACLEGCPVMAYDKDAETGIVRHLDDQCIGCQYCILKCPYDVPQYSERL 170 Query: 62 G 62 G Sbjct: 171 G 171 >gi|11498837|ref|NP_070066.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Archaeoglobus fulgidus DSM 4304] gi|2649346|gb|AAB90008.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Archaeoglobus fulgidus DSM 4304] Length = 769 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV E CI C C +VC + + I+P+ C CG+C CP DAI Sbjct: 569 AYVDEEKCIGC--RICEKVCEFNAVTV-DRKAKINPNACAMCGICVAACPADAI 619 Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 19/78 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 YV C C DC VCPV+ E + AI + CI C Sbjct: 237 YVDESKCKGCID-DCSSVCPVEIPNEFDYGIGVRKAIYIPIPQSTPLYAAIDWEHCIGCR 295 Query: 45 VCEPECPVDAIKPDTEPG 62 +CE C A+ +P Sbjct: 296 LCEKACQPKAVDFSQQPE 313 >gi|303328508|ref|ZP_07358945.1| iron-sulfur cluster-binding/ATPase domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861502|gb|EFL84439.1| iron-sulfur cluster-binding/ATPase domain protein [Desulfovibrio sp. 3_1_syn3] Length = 303 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V + C+ C C ++C + I P +C CGVC CP AI Sbjct: 63 IVQDLCVQCG--RCADLCRFGAVRNEDGHFVIDPLDCEGCGVCRALCPARAI 112 >gi|296104400|ref|YP_003614546.1| formate hydrogenlyase subunit 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058859|gb|ADF63597.1| formate hydrogenlyase subunit 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 202 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAGVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|255283527|ref|ZP_05348082.1| iron-sulfur cluster-binding protein [Bryantella formatexigens DSM 14469] gi|255265984|gb|EET59189.1| iron-sulfur cluster-binding protein [Bryantella formatexigens DSM 14469] Length = 372 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V T+ CI C C +C + +I ++C+ CG C CP DA++ ++ Sbjct: 192 VNTDACIGCG--ACSRICAHGAAVVTDKKASIDHNKCVGCGRCIGVCPKDAVEAASDEAN 249 Query: 64 ELWLKIN---SEYAT 75 ++ +N +EY+ Sbjct: 250 DI---LNCKIAEYSK 261 >gi|149925754|ref|ZP_01914018.1| probable ferredoxin protein [Limnobacter sp. MED105] gi|149825871|gb|EDM85079.1| probable ferredoxin protein [Limnobacter sp. MED105] Length = 103 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 9/87 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP GE I P +C +C C CPV+ Sbjct: 1 MALIITDECINCDV--CEPECPNGAISMGEEIYEIDPGKCTECVGHFDEPQCVVVCPVEC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNIT 81 I P + ++ ++ P+ T Sbjct: 59 I-PKDPAHPDTRQQLLGKFFKLHPDKT 84 >gi|193070557|ref|ZP_03051496.1| protein aegA [Escherichia coli E110019] gi|192956140|gb|EDV86604.1| protein aegA [Escherichia coli E110019] Length = 644 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|163845623|ref|YP_001633667.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222523325|ref|YP_002567795.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163666912|gb|ABY33278.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus aurantiacus J-10-fl] gi|222447204|gb|ACM51470.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroflexus sp. Y-400-fl] Length = 318 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + C+ C + C VCPV + E+ + + ++CI C C CP A Sbjct: 149 FIPRPCMQCDNPPCTGVCPVSATFTNEHGVVEVDYEQCIGCRACIAACPYGA 200 >gi|313112714|ref|ZP_07798363.1| ferredoxin [Faecalibacterium cf. prausnitzii KLE1255] gi|310624970|gb|EFQ08276.1| ferredoxin [Faecalibacterium cf. prausnitzii KLE1255] Length = 55 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + V++ C+ C C CPV + +++ D CIDCG CE CP AI + Sbjct: 1 MAHKVSDACVGCG--ACEGACPVGAITV-DGVASVNADACIDCGACEGACPTGAITAE 55 >gi|300087162|ref|YP_003757684.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526895|gb|ADJ25363.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 265 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEPGL 63 V++ C+ C CV VCPV ++ N + + +CI C C+ CP D K + + Sbjct: 66 VSKRCLHCFSPACVSVCPVGALHKEANGAVVWEEGKCIGCRYCQNACPFDIPKFEWDEPW 125 >gi|86159053|ref|YP_465838.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85775564|gb|ABC82401.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 491 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C+ C CP N + + CI CG C CP A Sbjct: 60 CMQCEAHPCTVDCPTGATSVDANGVVGVDAGVCIGCGNCVAACPYGA 106 >gi|219669176|ref|YP_002459611.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219539436|gb|ACL21175.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 194 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDA 54 +C C C VCPV ++ + +H + CI C VC CP A Sbjct: 56 SCRHCSEPQCAAVCPVGAIKSTDDGVVLHNELLCIGCQVCAAVCPYAA 103 Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 20/78 (25%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDE--------------CIDCG 44 M ++ + +CI CK C+ C + +N +L +HP E C C Sbjct: 4 MAMLIDSTSCIGCK--ACLAACKQENGLATDNNYLKMHPVEFLNDHYVRYYAHVSCRHCS 61 Query: 45 --VCEPECPVDAIKPDTE 60 C CPV AIK + Sbjct: 62 EPQCAAVCPVGAIKSTDD 79 >gi|324005537|gb|EGB74756.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 57-2] Length = 644 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|304412801|ref|ZP_07394403.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307307465|ref|ZP_07587200.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|304348881|gb|EFM13297.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910253|gb|EFN40686.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] Length = 553 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALHSYLNKVVSRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C +C CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|302392276|ref|YP_003828096.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302204353|gb|ADL13031.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 369 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP----DTEPGLE 64 CI C +C + CP D F E + + ++CI CG C CP DAI P D+ ++ Sbjct: 195 CITCG--ECSDWCPEDAF-EIDEVSRLDEEKCIGCGECIVTCPTDAITPRFVDDSADDIQ 251 Query: 65 LWLK 68 + Sbjct: 252 ERIA 255 >gi|300087166|ref|YP_003757688.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526899|gb|ADJ25367.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 275 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIK---PD 58 + V++ C+ C H CV VCPV + EN + + +CI C C+ CP D K + Sbjct: 68 HFVSKRCMHCIHPACVSVCPVGALQKLENGRVVWEEGKCIGCRYCQNACPFDIPKFSWYN 127 Query: 59 TEPGLELWLKI 69 E + W KI Sbjct: 128 EEGETDPWPKI 138 >gi|254037752|ref|ZP_04871810.1| electron transporter hydN [Escherichia sp. 1_1_43] gi|332280633|ref|ZP_08393046.1| electron transporter hydN [Shigella sp. D9] gi|226839376|gb|EEH71397.1| electron transporter hydN [Escherichia sp. 1_1_43] gi|332102985|gb|EGJ06331.1| electron transporter hydN [Shigella sp. D9] Length = 182 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 65 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 117 >gi|170741268|ref|YP_001769923.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168195542|gb|ACA17489.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 670 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C++VCP + +A+ P C CG C CP A P Sbjct: 286 CLDVCPTGAIAPAGDHVAVDPFVCAGCGSCASVCPTGAAAATLPPAD 332 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 TE C LC CV CP + + L+ C+ CG+C CP D I + Sbjct: 521 TEACTLC--HACVGACPTGALSDDPDRPLLSFSESLCVQCGLCAATCPEDVITLEPRLDF 578 Query: 64 ELWLK 68 W Sbjct: 579 AAWAA 583 >gi|254247589|ref|ZP_04940910.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia PC184] gi|124872365|gb|EAY64081.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia PC184] Length = 342 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 117 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCIAMLPV 174 Query: 59 --TEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 175 TGDRTGWDAWSQEQADAARE 194 >gi|20093897|ref|NP_613744.1| ferredoxin [Methanopyrus kandleri AV19] gi|19886838|gb|AAM01674.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 252 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD---TEPGL 63 + CI C C ++CPV+ + L I D+CI C CE CPVDAI + T P Sbjct: 133 DRCIAC--RLCEQICPVEAPNI--DKLRIDEDKCIGCKACEHACPVDAIVIERTLTPPEF 188 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDG 95 E ++++ + A +M+G Sbjct: 189 EREIELDQDMCIGCEVCVEVCPV--DAVEMEG 218 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C+ CVEVCPVD + I D CI CG C CP AIK Sbjct: 197 DMCIGCEV--CVEVCPVDAVEMEGDVANISYDRCIRCGECARNCPTGAIK 244 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ CK C E CPVD E + N + D C+ C +C CPVDAIK Sbjct: 47 ERCVGCK--TCYEECPVDALTEPDSTNPPEVDHDACVRCRLCAKSCPVDAIK 96 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 F+ I P+ C+ C C ECPVDA+ Sbjct: 40 EFVTIDPERCVGCKTCYEECPVDALTEPD 68 >gi|26249299|ref|NP_755339.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli CFT073] gi|91212264|ref|YP_542250.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UTI89] gi|117625118|ref|YP_854106.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli APEC O1] gi|227888434|ref|ZP_04006239.1| oxidoreductase Fe-S binding subunit [Escherichia coli 83972] gi|237706471|ref|ZP_04536952.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300980321|ref|ZP_07174975.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 45-1] gi|301049331|ref|ZP_07196301.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 185-1] gi|306812212|ref|ZP_07446410.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli NC101] gi|26109706|gb|AAN81909.1|AE016765_311 Hypothetical protein ygfT [Escherichia coli CFT073] gi|91073838|gb|ABE08719.1| hypothetical protein YgfT [Escherichia coli UTI89] gi|115514242|gb|ABJ02317.1| putative NADPH-dependent glutamate synthase beta chain [Escherichia coli APEC O1] gi|226899511|gb|EEH85770.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227834703|gb|EEJ45169.1| oxidoreductase Fe-S binding subunit [Escherichia coli 83972] gi|300298930|gb|EFJ55315.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 185-1] gi|300409329|gb|EFJ92867.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 45-1] gi|305854250|gb|EFM54688.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli NC101] gi|307625541|gb|ADN69845.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UM146] gi|315289452|gb|EFU48847.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 110-3] gi|315293882|gb|EFU53234.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 153-1] gi|323951675|gb|EGB47550.1| glutamate synthase [Escherichia coli H252] Length = 644 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|126176318|ref|YP_001052467.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999523|gb|ABN63598.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 553 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALHSYLNKVVSRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C +C CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|53728930|ref|ZP_00134519.2| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209139|ref|YP_001054364.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae L20] gi|126097931|gb|ABN74759.1| anaerobic dimethyl sulfoxide reductase chain B [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 205 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C CV+VCP ++ + ++ CI C C CP DA + Sbjct: 60 AYYMSISCNHCDDPVCVKVCPTGAMHKNADGFVMVNEYTCIGCRYCSMACPYDAPQY 116 >gi|322614338|gb|EFY11269.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621597|gb|EFY18450.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624458|gb|EFY21291.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628789|gb|EFY25572.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633484|gb|EFY30226.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635940|gb|EFY32648.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639648|gb|EFY36333.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646831|gb|EFY43334.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650599|gb|EFY47004.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654789|gb|EFY51108.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659009|gb|EFY55262.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664424|gb|EFY60618.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668327|gb|EFY64484.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673693|gb|EFY69794.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677754|gb|EFY73817.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681416|gb|EFY77448.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683818|gb|EFY79828.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193793|gb|EFZ78996.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200263|gb|EFZ85345.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203234|gb|EFZ88263.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205519|gb|EFZ90484.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212807|gb|EFZ97618.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216333|gb|EGA01060.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221081|gb|EGA05512.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226902|gb|EGA11084.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230814|gb|EGA14932.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234835|gb|EGA18921.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238874|gb|EGA22924.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241574|gb|EGA25605.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248279|gb|EGA32215.1| formate dehydrogenase-H ferredoxin subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251137|gb|EGA35010.1| formate dehydrogenase-H ferredoxin subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256020|gb|EGA39758.1| formate dehydrogenase-H ferredoxin subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263155|gb|EGA46693.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264340|gb|EGA47846.1| formate dehydrogenase-H ferredoxin subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271167|gb|EGA54595.1| formate dehydrogenase-H ferredoxin subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 181 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|320195004|gb|EFW69633.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli WV_060327] Length = 644 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|309786205|ref|ZP_07680833.1| aegA domain protein [Shigella dysenteriae 1617] gi|308925950|gb|EFP71429.1| aegA domain protein [Shigella dysenteriae 1617] Length = 134 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 17 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 69 >gi|301027817|ref|ZP_07191122.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 196-1] gi|299879079|gb|EFI87290.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 196-1] Length = 644 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|289823871|ref|ZP_06543477.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 181 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|290511033|ref|ZP_06550402.1| formate hydrogenlyase subunit 2 hycB [Klebsiella sp. 1_1_55] gi|289776026|gb|EFD84025.1| formate hydrogenlyase subunit 2 hycB [Klebsiella sp. 1_1_55] Length = 202 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QMCHHCEDAPCATVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|213426145|ref|ZP_03358895.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289810469|ref|ZP_06541098.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 161 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 8 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 58 >gi|205353787|ref|YP_002227588.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273568|emb|CAR38555.1| electron transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628895|gb|EGE35238.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 181 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|16761620|ref|NP_457237.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766149|ref|NP_461764.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143104|ref|NP_806446.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414795|ref|YP_151870.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181346|ref|YP_217763.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161502111|ref|YP_001569223.1| electron transport protein HydN [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|167550318|ref|ZP_02344075.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994146|ref|ZP_02575238.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230903|ref|ZP_02655961.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168242572|ref|ZP_02667504.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262044|ref|ZP_02684017.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464032|ref|ZP_02697949.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820470|ref|ZP_02832470.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443395|ref|YP_002042084.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449046|ref|YP_002046803.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472394|ref|ZP_03078378.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250119|ref|YP_002147740.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262354|ref|ZP_03162428.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363723|ref|YP_002143360.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386541|ref|ZP_03213153.1| protein AegA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928162|ref|ZP_03219362.1| protein AegA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207858107|ref|YP_002244758.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213027481|ref|ZP_03341928.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052203|ref|ZP_03345081.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426136|ref|ZP_03358886.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213613006|ref|ZP_03370832.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648112|ref|ZP_03378165.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852356|ref|ZP_03381888.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238909610|ref|ZP_04653447.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289823882|ref|ZP_06543488.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25285319|pir||AG0845 electron transport protein hydN [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421389|gb|AAL21723.1| electron transport protein (FeS center) from formate to hydrogen [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503921|emb|CAD05950.1| electron transport protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138737|gb|AAO70306.1| electron transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129052|gb|AAV78558.1| electron transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128979|gb|AAX66682.1| electron transport protein (FeS senter) from formate to hydrogen [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|160863458|gb|ABX20081.1| hypothetical protein SARI_00128 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194402058|gb|ACF62280.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407350|gb|ACF67569.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458758|gb|EDX47597.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633632|gb|EDX52046.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095200|emb|CAR60751.1| electron transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213822|gb|ACH51219.1| protein AegA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240609|gb|EDY23229.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199603639|gb|EDZ02184.1| protein AegA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322484|gb|EDZ07681.1| protein AegA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324768|gb|EDZ12607.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327919|gb|EDZ14683.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334616|gb|EDZ21380.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338064|gb|EDZ24828.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342881|gb|EDZ29645.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349297|gb|EDZ35928.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709910|emb|CAR34263.1| electron transport protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247979|emb|CBG25812.1| electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994965|gb|ACY89850.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159403|emb|CBW18921.1| electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913861|dbj|BAJ37835.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087246|emb|CBY97011.1| Frd operon probable iron-sulfur subunit A Flags: Fragment [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223395|gb|EFX48461.1| Electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715829|gb|EFZ07400.1| electron transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|332989715|gb|AEF08698.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 181 Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|331654383|ref|ZP_08355383.1| putative oxidoreductase, Fe-S subunit [Escherichia coli M718] gi|331047765|gb|EGI19842.1| putative oxidoreductase, Fe-S subunit [Escherichia coli M718] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|293412245|ref|ZP_06654968.1| oxidoreductase Fe-S binding subunit [Escherichia coli B354] gi|291469016|gb|EFF11507.1| oxidoreductase Fe-S binding subunit [Escherichia coli B354] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|219851137|ref|YP_002465569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219545396|gb|ACL15846.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 57 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V ++ C+ C+ CV+ CP + I D+C+DCG C CP AI D Sbjct: 5 VDSDLCVGCE--TCVDECPAEAIAMANGIAVIDKDKCVDCGSCVEVCPSSAITMD 57 >gi|212711148|ref|ZP_03319276.1| hypothetical protein PROVALCAL_02220 [Providencia alcalifaciens DSM 30120] gi|212686316|gb|EEB45844.1| hypothetical protein PROVALCAL_02220 [Providencia alcalifaciens DSM 30120] Length = 354 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 + + C+ C +CV VCPV + + PD C C C CP + Sbjct: 107 IKKQCMHCVDPNCVSVCPVSALTKDPKTGIVHYDPDICTGCRYCMVGCPFN 157 >gi|254445223|ref|ZP_05058699.1| 4Fe-4S binding domain protein [Verrucomicrobiae bacterium DG1235] gi|198259531|gb|EDY83839.1| 4Fe-4S binding domain protein [Verrucomicrobiae bacterium DG1235] Length = 527 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C C+ CPVD + + + + +H D+CI C C +CP D K Sbjct: 109 TVTSACHHCVEPACMIGCPVDAYEKDAVSGIVLHLDDQCIGCQYCVLKCPYDVPKF 164 >gi|188493744|ref|ZP_03001014.1| 4Fe-4S binding domain protein [Escherichia coli 53638] gi|188488943|gb|EDU64046.1| 4Fe-4S binding domain protein [Escherichia coli 53638] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|150021055|ref|YP_001306409.1| NADH dehydrogenase (quinone) [Thermosipho melanesiensis BI429] gi|149793576|gb|ABR31024.1| NADH dehydrogenase (quinone) [Thermosipho melanesiensis BI429] Length = 602 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +YV+ E C+ C T C VCP C + I C+ CG C C AI T Sbjct: 541 SYVIDPEKCVGC--TACARVCPASCISGEVRKVHEIDQSACVKCGSCIEVCRFGAISKVT 598 Query: 60 EP 61 Sbjct: 599 PA 600 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 13/32 (40%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I P++C+ C C CP I + E Sbjct: 542 YVIDPEKCVGCTACARVCPASCISGEVRKVHE 573 >gi|94263233|ref|ZP_01287050.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93456451|gb|EAT06571.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 291 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCPV+ + + + D+CI C C CP + D + Sbjct: 100 CQHCRKPACARVCPVNAISKLPEGPVVVVEDKCIGCRYCYQACPFSVPELDFDE 153 >gi|90409769|ref|ZP_01217786.1| tetrathionate reductase, subunit B [Photobacterium profundum 3TCK] gi|90329122|gb|EAS45379.1| tetrathionate reductase, subunit B [Photobacterium profundum 3TCK] Length = 262 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + CV+VCPV Y+ E+ + + C+ C C CP DA + E Sbjct: 117 CNHCDNPPCVKVCPVQATYQREDGIVMVDNKRCVACAYCVQACPYDARFINDE 169 >gi|238791881|ref|ZP_04635518.1| Tetrathionate reductase subunit B [Yersinia intermedia ATCC 29909] gi|238728985|gb|EEQ20502.1| Tetrathionate reductase subunit B [Yersinia intermedia ATCC 29909] Length = 244 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ ++ + + C+ C C CP +A Sbjct: 100 CNHCDNPPCVPVCPVQATYQRQDGIVVVDNTRCVGCAYCVQACPYEA 146 >gi|291287575|ref|YP_003504391.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884735|gb|ADD68435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 778 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 9/55 (16%) Query: 6 TENCILCKHTD----CVEVCPVDCFYEGEN----FLAI-HPDECIDCGVCEPECP 51 T C+ C C+EVCP EN F + +P +CI CG+C CP Sbjct: 708 TTRCMSCGFCRDCSFCLEVCPEQAITRTENPDGTFEYLSNPSKCIGCGICAGVCP 762 >gi|204930526|ref|ZP_03221456.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320460|gb|EDZ05663.1| molybdopterin-containing oxidoreductase iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 185 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C+H CV CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCEHPACVAACPVEAYTKCEDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|161615745|ref|YP_001589710.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365109|gb|ABX68877.1| hypothetical protein SPAB_03536 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 162 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 39 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 91 >gi|119898238|ref|YP_933451.1| phenylacetyl-CoA:acceptor oxidoreductase [Azoarcus sp. BH72] gi|119670651|emb|CAL94564.1| conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase [Azoarcus sp. BH72] Length = 215 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C C+EVCP + ++ + I D CI C C CP A Sbjct: 58 CQHCSDPPCMEVCPSTATGQRKDGIVTIDYDICIGCSYCAVACPYQA 104 >gi|115389268|ref|XP_001212139.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114194535|gb|EAU36235.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 226 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 182 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 + N+EYAT+ + K++ L + K + Sbjct: 183 ETS----------NAEYATETREELLYNKEKLLANGDKWE 212 >gi|148653489|ref|YP_001280582.1| NADH dehydrogenase subunit I [Psychrobacter sp. PRwf-1] gi|148572573|gb|ABQ94632.1| NADH-quinone oxidoreductase, chain I [Psychrobacter sp. PRwf-1] Length = 182 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVACISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L +++ N Y + I+ + Sbjct: 118 LTPDFELGEYVRQNLVYEKEHLLISGPGKYPD 149 >gi|193063468|ref|ZP_03044557.1| protein aegA [Escherichia coli E22] gi|293449209|ref|ZP_06663630.1| oxidoreductase Fe-S binding subunit [Escherichia coli B088] gi|300815663|ref|ZP_07095887.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 107-1] gi|192930745|gb|EDV83350.1| protein aegA [Escherichia coli E22] gi|291322299|gb|EFE61728.1| oxidoreductase Fe-S binding subunit [Escherichia coli B088] gi|300531592|gb|EFK52654.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 107-1] gi|320202545|gb|EFW77115.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli EC4100B] gi|323154766|gb|EFZ40964.1| hypothetical protein ECEPECA14_3375 [Escherichia coli EPECa14] gi|323162524|gb|EFZ48374.1| hypothetical protein ECE128010_1289 [Escherichia coli E128010] gi|323180329|gb|EFZ65881.1| hypothetical protein ECOK1180_1011 [Escherichia coli 1180] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|329119761|ref|ZP_08248439.1| electron transport complex protein RnfB [Neisseria bacilliformis ATCC BAA-1200] gi|327464124|gb|EGF10431.1| electron transport complex protein RnfB [Neisseria bacilliformis ATCC BAA-1200] Length = 281 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C+ CPVD + + EC CG+C CPVD I Sbjct: 83 ACIGC--TACIRACPVDAIMGASKLMHTVIAAECTGCGLCVAPCPVDCIH 130 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 79 IDEAACIGCTACIRACPVDAI 99 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDEC 40 M V+ C C CV CPVDC + + ++ P C Sbjct: 106 MHTVIAAECTGCGL--CVAPCPVDCIHMRPSENSVLPQAC 143 >gi|324017282|gb|EGB86501.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 117-3] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|323957393|gb|EGB53115.1| glutamate synthase [Escherichia coli H263] Length = 641 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 57 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 113 >gi|323941593|gb|EGB37773.1| glutamate synthase [Escherichia coli E482] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|312964855|ref|ZP_07779095.1| uncharacterized protein ygfT [Escherichia coli 2362-75] gi|312290411|gb|EFR18291.1| uncharacterized protein ygfT [Escherichia coli 2362-75] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|256019316|ref|ZP_05433181.1| putative oxidoreductase Fe-S binding subunit [Shigella sp. D9] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|237729679|ref|ZP_04560160.1| formate hydrogenlyase subunit 2 [Citrobacter sp. 30_2] gi|226908285|gb|EEH94203.1| formate hydrogenlyase subunit 2 [Citrobacter sp. 30_2] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHQCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|221635464|ref|YP_002523340.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermomicrobium roseum DSM 5159] gi|221157489|gb|ACM06607.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Thermomicrobium roseum DSM 5159] Length = 271 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C C+E CP E + + I D C C C CP I+ + E Sbjct: 78 SDVCKHCVRAACLEACPTGAIIRTEFDTVVIQQDVCNGCRACISACPFGVIEINPE 133 >gi|315230917|ref|YP_004071353.1| 4Fe-4S cluster-binding protein [Thermococcus barophilus MP] gi|315183945|gb|ADT84130.1| 4Fe-4S cluster-binding protein [Thermococcus barophilus MP] Length = 211 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 V C C+ C++VCP + E I + ++CI C +C CP K + E Sbjct: 64 VPLRCQHCEDAPCMKVCPTGAIKKSEEGFVILNTNKCIGCLMCVMACPFGHPKYEPE 120 >gi|301327286|ref|ZP_07220542.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 78-1] gi|300846149|gb|EFK73909.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 78-1] gi|323946628|gb|EGB42651.1| glutamate synthase [Escherichia coli H120] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|74313445|ref|YP_311864.1| putative oxidoreductase Fe-S binding subunit [Shigella sonnei Ss046] gi|73856922|gb|AAZ89629.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|323167910|gb|EFZ53600.1| hypothetical protein SS53G_1789 [Shigella sonnei 53G] gi|323173883|gb|EFZ59512.1| hypothetical protein ECLT68_2202 [Escherichia coli LT-68] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|46579698|ref|YP_010506.1| reductase, iron-sulfur binding subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120602822|ref|YP_967222.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio vulgaris DP4] gi|46449113|gb|AAS95765.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563051|gb|ABM28795.1| putative sulfite reductase-associated electron transfer protein DsrO [Desulfovibrio vulgaris DP4] gi|311233493|gb|ADP86347.1| reductase, iron-sulfur binding subunit, putative [Desulfovibrio vulgaris RCH1] Length = 261 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C++ CV VCP F + + + CI C C CP A + Sbjct: 124 CNHCENPPCVRVCPTKATFKRADGIVVMDYHRCIGCRFCMAGCPYGARSFNFGDPQPHIK 183 Query: 68 KINSEYATQWPNITTKK 84 IN ++ + + K Sbjct: 184 AINPKFPARTRGVVEKC 200 >gi|300947606|ref|ZP_07161778.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1] gi|300954275|ref|ZP_07166738.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1] gi|301643765|ref|ZP_07243803.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1] gi|307139573|ref|ZP_07498929.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli H736] gi|331643575|ref|ZP_08344706.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H736] gi|887837|gb|AAA83068.1| ORF_f644 [Escherichia coli] gi|300318736|gb|EFJ68520.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1] gi|300452803|gb|EFK16423.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1] gi|301077864|gb|EFK92670.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1] gi|315137486|dbj|BAJ44645.1| oxidoreductase Fe-S binding subunit [Escherichia coli DH1] gi|331037046|gb|EGI09270.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H736] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|21672444|ref|NP_660511.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008868|sp|Q8K9Y0|NUOI_BUCAP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21623057|gb|AAM67722.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 180 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 12/75 (16%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C VCPVDC G F I+ CI CG+CE CP AI Sbjct: 57 GERCVACNL--CAVVCPVDCISLQKSEKKNGRWYPKFFRINFSRCIFCGLCEEACPTAAI 114 Query: 56 KPDTEPGLELWLKIN 70 + + L + + N Sbjct: 115 QLMPDFELSDFNRQN 129 >gi|15803423|ref|NP_289456.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 EDL933] gi|15833013|ref|NP_311786.1| oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. Sakai] gi|195936503|ref|ZP_03081885.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. EC4024] gi|208821824|ref|ZP_03262144.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4042] gi|217327438|ref|ZP_03443521.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. TW14588] gi|261226199|ref|ZP_05940480.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261256546|ref|ZP_05949079.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284207|ref|YP_003501025.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. CB9615] gi|12517413|gb|AAG58015.1|AE005519_1 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13363231|dbj|BAB37182.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|208741947|gb|EDZ89629.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4042] gi|209760638|gb|ACI78631.1| putative oxidoreductase, Fe-S subunit [Escherichia coli] gi|209760640|gb|ACI78632.1| putative oxidoreductase, Fe-S subunit [Escherichia coli] gi|209760642|gb|ACI78633.1| putative oxidoreductase, Fe-S subunit [Escherichia coli] gi|209760644|gb|ACI78634.1| putative oxidoreductase, Fe-S subunit [Escherichia coli] gi|209760646|gb|ACI78635.1| putative oxidoreductase, Fe-S subunit [Escherichia coli] gi|217319805|gb|EEC28230.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. TW14588] gi|290764080|gb|ADD58041.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. CB9615] gi|320189229|gb|EFW63888.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. EC1212] gi|320640529|gb|EFX10068.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. G5101] gi|320645776|gb|EFX14761.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H- str. 493-89] gi|320651076|gb|EFX19516.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H- str. H 2687] gi|320667167|gb|EFX34130.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. LSU-61] gi|326339030|gb|EGD62845.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. 1044] gi|326343087|gb|EGD66855.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. 1125] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|283786740|ref|YP_003366605.1| electron transport protein [Citrobacter rodentium ICC168] gi|282950194|emb|CBG89830.1| electron transport protein [Citrobacter rodentium ICC168] Length = 181 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|255527516|ref|ZP_05394384.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|255508786|gb|EET85158.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] Length = 184 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CPV+ + + + ++ CI C C CPV A+ Sbjct: 64 CRHCEDAPCANACPVNAIEQDDGSIRVNESACIGCKTCMLVCPVGAV 110 >gi|238919983|ref|YP_002933498.1| hypothetical protein NT01EI_2087 [Edwardsiella ictaluri 93-146] gi|259646560|sp|C5BDE6|RNFB_EDWI9 RecName: Full=Electron transport complex protein rnfB gi|238869552|gb|ACR69263.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 191 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD L + D+C CG+C P CP I+ Sbjct: 115 NCIGC--TKCIQSCPVDAIVGATRALHTVISDQCTGCGLCLPPCPTSCIQ 162 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 111 IDEANCIGCTKCIQSCPVDAI 131 >gi|288550044|ref|ZP_05969087.2| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Enterobacter cancerogenus ATCC 35316] gi|288316529|gb|EFC55467.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Enterobacter cancerogenus ATCC 35316] Length = 166 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C++ C+ CPV+ + + ++ + +H P+ CI C C CP A + + E Sbjct: 37 ACNHCENPACLAACPVEAYTKRDDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 90 >gi|213420829|ref|ZP_03353895.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 132 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 9 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 61 >gi|150401223|ref|YP_001324989.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013926|gb|ABR56377.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 131 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV CPV E + DECI C C CP +A++ E Sbjct: 80 DKCIDCG--ACVVHCPVKAISVEEYKIIFDYDECIGCKNCVKVCPTNAVEVLDE 131 Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 15/24 (62%) Query: 36 HPDECIDCGVCEPECPVDAIKPDT 59 + D+CIDCG C CPV AI + Sbjct: 78 NEDKCIDCGACVVHCPVKAISVEE 101 >gi|110834471|ref|YP_693330.1| electron transport complex protein RnfB [Alcanivorax borkumensis SK2] gi|122959433|sp|Q0VP40|RNFB_ALCBS RecName: Full=Electron transport complex protein rnfB; AltName: Full=Nitrogen fixation protein rnfB gi|110647582|emb|CAL17058.1| electron transport complex protein rnfB, putative [Alcanivorax borkumensis SK2] Length = 194 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I + Sbjct: 109 AYIREDECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVEPCPVDCIDMLEV 166 Query: 60 EPGLELW 66 +P L+ W Sbjct: 167 KPTLQTW 173 >gi|323935882|gb|EGB32181.1| glutamate synthase [Escherichia coli E1520] Length = 641 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 57 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 113 >gi|309703247|emb|CBJ02582.1| putative oxidoreductase [Escherichia coli ETEC H10407] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|301064770|ref|ZP_07205150.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300441145|gb|EFK05530.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 196 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C+ C + + + I+PD+CI+C C CP I+ + Sbjct: 60 CRHCEPAPCMAACLANAIFRDPEKETVLINPDKCINCASCAMACPYGVIRFHEDA 114 >gi|298488743|ref|ZP_07006772.1| Electron transport complex protein rnfB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156816|gb|EFH97907.1| Electron transport complex protein rnfB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 290 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 113 MHTVIVDECTGCDL--CVAPCPVDCIEM 138 >gi|242399760|ref|YP_002995185.1| Indolepyruvate: ferredoxin oxidoreductase (IOR), subunit alpha [Thermococcus sibiricus MM 739] gi|242266154|gb|ACS90836.1| Indolepyruvate: ferredoxin oxidoreductase (IOR), subunit alpha [Thermococcus sibiricus MM 739] Length = 632 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + C CK + CP F E +++ C CG+CE CP D I ++ Sbjct: 575 VIKDKCTGCKACALLTGCPALVFDEERGKISVDSLICTGCGLCEQLCPFDVIVYPSK 631 >gi|215484255|ref|YP_002326482.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii AB307-0294] gi|260555960|ref|ZP_05828180.1| electron transport complex [Acinetobacter baumannii ATCC 19606] gi|332853651|ref|ZP_08434881.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013150] gi|332870830|ref|ZP_08439475.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013113] gi|193076747|gb|ABO11457.2| putative iron-sulfur protein [Acinetobacter baumannii ATCC 17978] gi|213987984|gb|ACJ58283.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii AB307-0294] gi|260410871|gb|EEX04169.1| electron transport complex [Acinetobacter baumannii ATCC 19606] gi|332728475|gb|EGJ59849.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013150] gi|332731931|gb|EGJ63209.1| electron transport complex, RnfABCDGE type, B subunit [Acinetobacter baumannii 6013113] Length = 263 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCINACPVDAI 107 >gi|255280972|ref|ZP_05345527.1| protein HymB [Bryantella formatexigens DSM 14469] gi|255268420|gb|EET61625.1| protein HymB [Bryantella formatexigens DSM 14469] Length = 626 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +V+ E C C C + CPV I P+ CI C C+ C DAI + Sbjct: 570 FVINPEYCKGCG--KCAKNCPVGAITGVRRECYHIDPNICIKCSACKDNCAFDAIYVE 625 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 14/29 (48%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + I+P+ C CG C CPV AI Sbjct: 564 CQAMRRFVINPEYCKGCGKCAKNCPVGAI 592 >gi|255536839|ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] gi|223549385|gb|EEF50873.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis] Length = 222 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|218559879|ref|YP_002392792.1| oxidoreductase Fe-S binding subunit [Escherichia coli S88] gi|218366648|emb|CAR04402.1| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli S88] gi|222034582|emb|CAP77324.1| Uncharacterized protein ygfT [Escherichia coli LF82] gi|281179892|dbj|BAI56222.1| putative oxidoreductase [Escherichia coli SE15] gi|294489481|gb|ADE88237.1| protein aegA [Escherichia coli IHE3034] gi|307554863|gb|ADN47638.1| putative oxidoreductase, Fe-S subunit [Escherichia coli ABU 83972] gi|312947419|gb|ADR28246.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|218555435|ref|YP_002388348.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli IAI1] gi|218696482|ref|YP_002404149.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli 55989] gi|260845554|ref|YP_003223332.1| fused putative oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O103:H2 str. 12009] gi|260857009|ref|YP_003230900.1| fused putative oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O26:H11 str. 11368] gi|260869563|ref|YP_003235965.1| fused putative oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O111:H- str. 11128] gi|307310495|ref|ZP_07590143.1| glutamate synthase, small subunit [Escherichia coli W] gi|218353214|emb|CAU99127.1| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli 55989] gi|218362203|emb|CAQ99821.1| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli IAI1] gi|257755658|dbj|BAI27160.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O26:H11 str. 11368] gi|257760701|dbj|BAI32198.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O103:H2 str. 12009] gi|257765919|dbj|BAI37414.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O111:H- str. 11128] gi|306909390|gb|EFN39885.1| glutamate synthase, small subunit [Escherichia coli W] gi|315062190|gb|ADT76517.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli W] gi|323183439|gb|EFZ68836.1| hypothetical protein ECOK1357_3218 [Escherichia coli 1357] gi|323377226|gb|ADX49494.1| glutamate synthase, small subunit [Escherichia coli KO11] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|215488186|ref|YP_002330617.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|215266258|emb|CAS10687.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli O127:H6 str. E2348/69] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|209920341|ref|YP_002294425.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli SE11] gi|209913600|dbj|BAG78674.1| putative oxidoreductase [Escherichia coli SE11] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|206575763|ref|YP_002236942.1| electron transport protein HydN [Klebsiella pneumoniae 342] gi|288933898|ref|YP_003437957.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] gi|290511021|ref|ZP_06550390.1| electron transporter HydN [Klebsiella sp. 1_1_55] gi|206564821|gb|ACI06597.1| electron transport protein HydN [Klebsiella pneumoniae 342] gi|288888627|gb|ADC56945.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] gi|289776014|gb|EFD84013.1| electron transporter HydN [Klebsiella sp. 1_1_55] Length = 175 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP + F+ + + CI C C CP A++ P + Sbjct: 55 ATACRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRH 114 >gi|168760013|ref|ZP_02785020.1| protein aegA [Escherichia coli O157:H7 str. EC4501] gi|187776143|ref|ZP_02800769.2| protein aegA [Escherichia coli O157:H7 str. EC4196] gi|188024587|ref|ZP_02772659.2| protein aegA [Escherichia coli O157:H7 str. EC4113] gi|189009935|ref|ZP_02803905.2| protein aegA [Escherichia coli O157:H7 str. EC4076] gi|189401888|ref|ZP_02778830.2| protein aegA [Escherichia coli O157:H7 str. EC4401] gi|189402895|ref|ZP_02791885.2| protein aegA [Escherichia coli O157:H7 str. EC4486] gi|189404784|ref|ZP_02810738.2| protein aegA [Escherichia coli O157:H7 str. EC869] gi|189405896|ref|ZP_02825025.2| protein aegA [Escherichia coli O157:H7 str. EC508] gi|208806338|ref|ZP_03248675.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4206] gi|208812191|ref|ZP_03253520.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4045] gi|209398308|ref|YP_002272360.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4115] gi|187768802|gb|EDU32646.1| protein aegA [Escherichia coli O157:H7 str. EC4196] gi|188017760|gb|EDU55882.1| protein aegA [Escherichia coli O157:H7 str. EC4113] gi|189003254|gb|EDU72240.1| protein aegA [Escherichia coli O157:H7 str. EC4076] gi|189358372|gb|EDU76791.1| protein aegA [Escherichia coli O157:H7 str. EC4401] gi|189363783|gb|EDU82202.1| protein aegA [Escherichia coli O157:H7 str. EC4486] gi|189369334|gb|EDU87750.1| protein aegA [Escherichia coli O157:H7 str. EC4501] gi|189374106|gb|EDU92522.1| protein aegA [Escherichia coli O157:H7 str. EC869] gi|189377665|gb|EDU96081.1| protein aegA [Escherichia coli O157:H7 str. EC508] gi|208726139|gb|EDZ75740.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4206] gi|208733468|gb|EDZ82155.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4045] gi|209159708|gb|ACI37141.1| glutamate synthase, small subunit [Escherichia coli O157:H7 str. EC4115] Length = 641 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 57 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 113 >gi|157155252|ref|YP_001464036.1| formate hydrogenlyase, subunit B [Escherichia coli E24377A] gi|157077282|gb|ABV16990.1| formate hydrogenlyase, subunit B [Escherichia coli E24377A] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|153952794|ref|YP_001393559.1| hydrogenase [Clostridium kluyveri DSM 555] gi|219853459|ref|YP_002470581.1| hypothetical protein CKR_0116 [Clostridium kluyveri NBRC 12016] gi|146345675|gb|EDK32211.1| Predicted hydrogenase [Clostridium kluyveri DSM 555] gi|219567183|dbj|BAH05167.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 447 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 6 TENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C T C + CP D ++ +N I D+C DCG C CP +I Sbjct: 82 SQECRDGDKTLCEKSCPFDAIFIHKEKNHPFIDKDKCTDCGFCVDACPNGSIMD 135 >gi|170018867|ref|YP_001723821.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli ATCC 8739] gi|169753795|gb|ACA76494.1| glutamate synthase, small subunit [Escherichia coli ATCC 8739] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|113867422|ref|YP_725911.1| benzoyl-CoA oxygenase component A [Ralstonia eutropha H16] gi|113526198|emb|CAJ92543.1| Benzoyl-CoA oxygenase component A [Ralstonia eutropha H16] Length = 416 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRCN--TCEDTCPIDAITHDDRNYVVRADVCNGCNACLSPCPTGAI 61 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHDDR 37 >gi|89109666|ref|AP_003446.1| fused predicted oxidoreductase Fe-S subunit and nucleotide-binding subunit [Escherichia coli str. K-12 substr. W3110] gi|90111509|ref|NP_417363.2| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli str. K-12 substr. MG1655] gi|170082448|ref|YP_001731768.1| fused oxidoreductase: Fe-S subunit; nucleotide-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238902012|ref|YP_002927808.1| fused putative oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli BW2952] gi|6136710|sp|Q46820|YGFT_ECOLI RecName: Full=Uncharacterized protein ygfT gi|85675699|dbj|BAE76952.1| fused predicted oxidoreductase Fe-S subunit and nucleotide-binding subunit [Escherichia coli str. K12 substr. W3110] gi|87082180|gb|AAC75925.2| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli str. K-12 substr. MG1655] gi|169890283|gb|ACB03990.1| fused predicted oxidoreductase: Fe-S subunit; nucleotide-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|238861232|gb|ACR63230.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli BW2952] gi|260448068|gb|ACX38490.1| glutamate synthase, small subunit [Escherichia coli DH1] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|117919087|ref|YP_868279.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117611419|gb|ABK46873.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 251 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C++ C+ +CP ++ + + + + + C+ CG C CP DA Sbjct: 98 CNHCENPPCIPICPTGATFQRPDGIVVVNNEWCVGCGYCVQACPYDA 144 >gi|333001982|gb|EGK21548.1| protein aegA [Shigella flexneri K-218] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|331000824|ref|ZP_08324470.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329570352|gb|EGG52085.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 210 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C C+ C++VCP+ Y+G + + I D+CI C C CP + + + Sbjct: 55 SCQHCEDPACLKVCPMKAVYKGPHGEILIDQDKCIACKACLAACPYGMPMFNDQKLTSYF 114 Query: 67 LKINSEYATQWPNITTKKESLPSAAK 92 + ++ P K + P A+ Sbjct: 115 GEKQPLFSPSNPP---TKNAQPGKAE 137 >gi|324119927|gb|EGC13806.1| glutamate synthase [Escherichia coli E1167] Length = 641 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 57 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 113 >gi|160877323|ref|YP_001556639.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|160862845|gb|ABX51379.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|315269528|gb|ADT96381.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 553 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALHSYLNKVVSRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C +C CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTMC--MSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|158319513|ref|YP_001512020.1| nitrite and sulphite reductase 4Fe-4S region [Alkaliphilus oremlandii OhILAs] gi|158139712|gb|ABW18024.1| nitrite and sulphite reductase 4Fe-4S region [Alkaliphilus oremlandii OhILAs] Length = 284 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ CK CV CP D E+ I + CI CG C CP AIK Sbjct: 157 CVGCKQ--CVRSCP-DRMITAEDEPKIDMEGCIHCGRCIQACPTGAIK 201 >gi|300087813|ref|YP_003758335.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527546|gb|ADJ26014.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 1119 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAI 55 VV ENC C + CV+ CP D E + + P C CGVC CP I Sbjct: 1042 VVDENCDGCAY--CVDPCPYDAISLIEYRKNGETKKTVEADPMRCHGCGVCMATCPKQGI 1099 >gi|294491165|gb|ADE89921.1| protein aegA [Escherichia coli IHE3034] Length = 636 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|326201306|ref|ZP_08191178.1| putative PAS/PAC sensor protein [Clostridium papyrosolvens DSM 2782] gi|325988874|gb|EGD49698.1| putative PAS/PAC sensor protein [Clostridium papyrosolvens DSM 2782] Length = 574 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV+ + I DEC+ CG C CP +A Sbjct: 10 NCKNC--YKCIRSCPVNAIAFKNDQAEIIHDECMLCGNCLTVCPQNA 54 >gi|218886034|ref|YP_002435355.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756988|gb|ACL07887.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 195 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 C C++ C+ CPV + + E+ + +H D CI CG C CP A + Sbjct: 65 ACNHCENPACLNACPVKAYEKREDGVVVHHQDRCIGCGNCIRSCPYGAPRY 115 >gi|169796778|ref|YP_001714571.1| hypothetical protein ABAYE2765 [Acinetobacter baumannii AYE] gi|213156829|ref|YP_002318490.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB0057] gi|239502943|ref|ZP_04662253.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB900] gi|301345598|ref|ZP_07226339.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB056] gi|301510039|ref|ZP_07235276.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB058] gi|301597671|ref|ZP_07242679.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB059] gi|169149705|emb|CAM87596.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|213055989|gb|ACJ40891.1| electron transport complex, rnfaBcdge type, B subunit [Acinetobacter baumannii AB0057] Length = 263 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCINACPVDAI 107 >gi|238789980|ref|ZP_04633759.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] gi|238721928|gb|EEQ13589.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia frederiksenii ATCC 33641] Length = 205 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C CV CP Y E + + ++ D C+ C CE CP A + D + Sbjct: 60 YYLSIACNHCSSPTCVTGCPTGAMYKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFDAK 119 Query: 61 PGL 63 L Sbjct: 120 KKL 122 >gi|320182215|gb|EFW57118.1| putative oxidoreductase Fe-S binding subunit [Shigella boydii ATCC 9905] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|255626927|gb|ACU13808.1| unknown [Glycine max] Length = 222 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|254794838|ref|YP_003079675.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. TW14359] gi|254594238|gb|ACT73599.1| fused predicted oxidoreductase: Fe-S subunit, nucleotide-binding subunit [Escherichia coli O157:H7 str. TW14359] gi|320656572|gb|EFX24468.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|218134605|ref|ZP_03463409.1| hypothetical protein BACPEC_02508 [Bacteroides pectinophilus ATCC 43243] gi|217989990|gb|EEC56001.1| hypothetical protein BACPEC_02508 [Bacteroides pectinophilus ATCC 43243] Length = 218 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ CI C CV+ CP C G +I + C+ CG C CPV A+K Sbjct: 156 YHITDACIGCG--TCVQHCPQSCISCVEDAETGNTHFSIRQEHCLHCGACYEHCPVGAVK 213 >gi|119719904|ref|YP_920399.1| cobyrinic acid a,c-diamide synthase [Thermofilum pendens Hrk 5] gi|119525024|gb|ABL78396.1| Cobyrinic acid a,c-diamide synthase [Thermofilum pendens Hrk 5] Length = 288 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C CV+ C + G + D C G C CP AI E E++ Sbjct: 71 ACVKC--WACVDACQFNAIRRGPEGPVVDYDRCEGLGTCAFVCPAGAIGFAEERAGEIYA 128 Query: 68 K 68 Sbjct: 129 A 129 >gi|77416915|gb|ABA81853.1| NADH:ubiquinone oxidoreductase-like [Solanum tuberosum] Length = 229 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 184 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 128 ERCIACKLCEAICPAQAITIEAEERED 154 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 169 CIYCGF--CQEACPVDAIVEGPNF 190 >gi|319940638|ref|ZP_08014981.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] gi|319806004|gb|EFW02762.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] Length = 230 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA--IKPD 58 + + +C C + CV+VCP + N + ++ D C+ C C CP +A I P+ Sbjct: 93 HYIRVSCQQCVDSPCVKVCPTGACHHDPETNIVTMNTDRCVGCKYCIAACPYNARWINPE 152 Query: 59 TEPGL 63 T+ Sbjct: 153 TKVAD 157 >gi|308271661|emb|CBX28269.1| hypothetical protein N47_G35930 [uncultured Desulfobacterium sp.] Length = 988 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + C C CV CP GE I P +C CG C ECP AI Sbjct: 914 VNPDRCAACL--TCVRTCPYGVPRVGEEGYAVIEPSDCHGCGCCVSECPGKAITLKHFTD 971 Query: 63 LELWLKINSEYATQ 76 ++ K ++ + Q Sbjct: 972 DQINAKTDALFYKQ 985 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 21/87 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 Y+ + C C C +VCPV E I + CI CG Sbjct: 81 YIDSVKCTACGQ--CRQVCPVTAVNEFDCRLDLRKATFIKFPQAVPLSYTIDRNVCIGCG 138 Query: 45 VCEPECPVDAIKPDTEPGLELWLKINS 71 +CE C AI +P +++ + Sbjct: 139 MCEKACLAGAISYSDQPRFSE-IEVGA 164 >gi|261403301|ref|YP_003247525.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370294|gb|ACX73043.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 154 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C++ C E+CPVD Y + + ++CI CG+C CP+ AI Sbjct: 42 CMQCENAPCKEICPVDAIYLKDGIPIVSKEKCIACGMCALACPIGAIF 89 >gi|110806401|ref|YP_689921.1| putative oxidoreductase Fe-S binding subunit [Shigella flexneri 5 str. 8401] gi|110615949|gb|ABF04616.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|34557325|ref|NP_907140.1| hypothetical protein WS0936 [Wolinella succinogenes DSM 1740] gi|34483041|emb|CAE10040.1| TTRB [Wolinella succinogenes] Length = 269 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 + C C+ CV VCP F + + + C CG C CP D Sbjct: 108 QLCNHCEAPSCVSVCPTGATFKRTDGIVVVDNTICWGCGYCLNACPYD 155 >gi|71274587|ref|ZP_00650875.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Dixon] gi|71898126|ref|ZP_00680312.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|170730849|ref|YP_001776282.1| ferredoxin [Xylella fastidiosa M12] gi|71164319|gb|EAO14033.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Dixon] gi|71732100|gb|EAO34156.1| Electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa Ann-1] gi|167965642|gb|ACA12652.1| ferredoxin II [Xylella fastidiosa M12] Length = 139 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 82 AWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 135 >gi|304314163|ref|YP_003849310.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] gi|302587622|gb|ADL57997.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] Length = 366 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VV C C +CV CPVD + + I D CI C C CP D E + Sbjct: 189 VVRGECTECG--ECVSECPVDAMTL-HDGVMIEYDRCIACMNCLDTCPRGVFDLDWERDI 245 Query: 64 ELWLKINSEYA 74 +++ EYA Sbjct: 246 PEFIERMMEYA 256 >gi|256372222|ref|YP_003110046.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidimicrobium ferrooxidans DSM 10331] gi|256008806|gb|ACU54373.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Acidimicrobium ferrooxidans DSM 10331] Length = 762 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V+T+ C C +C+ CPV+ + + C+ C CE CP DAI Sbjct: 8 VLTDRCAGC--QECLIRCPVEAIDLDLDRYVVTVDSARCVGCRQCERVCPFDAI 59 >gi|255657273|ref|ZP_05402682.1| electron transport protein [Clostridium difficile QCD-23m63] gi|296451874|ref|ZP_06893592.1| electron transporter [Clostridium difficile NAP08] gi|296879730|ref|ZP_06903705.1| electron transporter [Clostridium difficile NAP07] gi|296259291|gb|EFH06168.1| electron transporter [Clostridium difficile NAP08] gi|296429319|gb|EFH15191.1| electron transporter [Clostridium difficile NAP07] Length = 183 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C+ CP + N ++++ ++CI C C CP AI Sbjct: 65 CRHCEDAPCLNSCPQKAIIKENNIMSVNEEKCIGCKTCLLACPFGAI 111 >gi|259484821|tpe|CBF81370.1| TPA: hypothetical protein similar to : Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Broad) [Aspergillus nidulans FGSC A4] Length = 224 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 123 ERCIACKL--CEAVCPAQAITIEAEERVDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 180 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 181 ETA----------NAEYATETREELLYNKEKLLANGDKWE 210 >gi|317054480|ref|YP_004118505.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pantoea sp. At-9b] gi|316952475|gb|ADU71949.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pantoea sp. At-9b] Length = 181 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|261344832|ref|ZP_05972476.1| hydrogenase-2 operon protein HybA [Providencia rustigianii DSM 4541] gi|282567281|gb|EFB72816.1| hydrogenase-2 operon protein HybA [Providencia rustigianii DSM 4541] Length = 349 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 + + C+ C +CV VCPV + + PD C C C CP + Sbjct: 107 IKKQCMHCVDPNCVSVCPVSALTKDPKTGIVHYDPDICTGCRYCMVGCPFN 157 >gi|197301314|ref|ZP_03166399.1| hypothetical protein RUMLAC_00045 [Ruminococcus lactaris ATCC 29176] gi|197299632|gb|EDY34147.1| hypothetical protein RUMLAC_00045 [Ruminococcus lactaris ATCC 29176] Length = 628 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++++ E C C + C CPV + I ++CI CG C C AI + Sbjct: 572 FIISPERCKGC--SKCARNCPVGAISGKIKEPFTIDTEKCIKCGACASACAFGAIHIE 627 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 11/25 (44%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I P+ C C C CPV AI Sbjct: 570 RKFIISPERCKGCSKCARNCPVGAI 594 >gi|171185522|ref|YP_001794441.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934734|gb|ACB39995.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 290 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 C C++ CV CP + + D CI C C CP +A+ D Sbjct: 54 CNHCENAPCVNSCPTGALRHNPETGIVQLDKDLCIGCRACTRACPYNAVYID 105 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 24/71 (33%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG---------VCEPECPV 52 + CI C C CP + + I P D+C C C CP Sbjct: 85 DLCIGC--RACTRACPYNA-------VYIDPRTNKADKCTFCEHLVYSGLLPACVAACPT 135 Query: 53 DA-IKPDTEPG 62 A I D E Sbjct: 136 GARIFGDIEDP 146 >gi|157159085|ref|YP_001464224.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli E24377A] gi|157081115|gb|ABV20823.1| protein aegA homolog [Escherichia coli E24377A] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|148244307|ref|YP_001219001.1| electron transport complex protein RnfB [Candidatus Vesicomyosocius okutanii HA] gi|146326134|dbj|BAF61277.1| electron transport complex protein RnfB [Candidatus Vesicomyosocius okutanii HA] Length = 181 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 +V + CI C T C++ CPVD F + I +EC C +C P CPVD I Sbjct: 109 FVDEQACIGC--TLCIQACPVDAFVGASKMMTQVII-NECTGCDLCIPVCPVDCIY 161 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY 27 MT V+ C C C+ VCPVDC Y Sbjct: 137 MTQVIINECTGCDL--CIPVCPVDCIY 161 >gi|78043167|ref|YP_360674.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77995282|gb|ABB14181.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 213 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + C+ C CV+VCPV Y+ EN + I D CI C C CP A Sbjct: 57 IPRPCMQCDRPACVQVCPVKATYKMENGIVAIDYDRCIGCRYCVVSCPYGA 107 >gi|322706310|gb|EFY97891.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Metarhizium anisopliae ARSEF 23] Length = 247 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 182 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 183 ESP----------NAEYATE 192 >gi|269791767|ref|YP_003316671.1| NADH dehydrogenase (quinone) [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099402|gb|ACZ18389.1| NADH dehydrogenase (quinone) [Thermanaerovibrio acidaminovorans DSM 6589] Length = 596 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E C C T C +VCP D I D+C+ CG C C AI Sbjct: 541 YVIDPEKCKGC--TLCAKVCPADAISGKVREPHVIDQDKCVKCGACYTACKFGAI 593 >gi|213582546|ref|ZP_03364372.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 122 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|206889382|ref|YP_002249517.1| hydrogenase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741320|gb|ACI20377.1| hydrogenase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 465 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKP 57 NC+ C C VCP + +I D+CI+CG C CP A++ Sbjct: 36 NCVGC--HTCSSVCPAGAVKGSFGDKHSIDLDKCINCGQCLLNCPFGAVEQ 84 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ C+ C C CP A+K Sbjct: 32 INEGNCVGCHTCSSVCPAGAVK 53 >gi|26249108|ref|NP_755148.1| electron transport protein HydN [Escherichia coli CFT073] gi|91212072|ref|YP_542058.1| electron transport protein HydN [Escherichia coli UTI89] gi|26109515|gb|AAN81718.1|AE016765_120 Electron transport protein hydN [Escherichia coli CFT073] gi|91073646|gb|ABE08527.1| electron transport protein HydN [Escherichia coli UTI89] gi|323377429|gb|ADX49697.1| electron transport protein HydN [Escherichia coli KO11] Length = 180 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 63 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 115 >gi|24113797|ref|NP_708307.1| putative oxidoreductase Fe-S binding subunit [Shigella flexneri 2a str. 301] gi|30063848|ref|NP_838019.1| putative oxidoreductase Fe-S binding subunit [Shigella flexneri 2a str. 2457T] gi|24052881|gb|AAN44014.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|30042103|gb|AAP17829.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|332756504|gb|EGJ86855.1| protein aegA [Shigella flexneri 2747-71] gi|333016371|gb|EGK35702.1| protein aegA [Shigella flexneri K-304] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|94310165|ref|YP_583375.1| benzoyl-CoA oxygenase subunit A [Cupriavidus metallidurans CH34] gi|93354017|gb|ABF08106.1| Benzoyl-CoA oxygenase component A [Cupriavidus metallidurans CH34] Length = 415 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D + + D C C C CP AI Sbjct: 15 EICIRCN--TCEDTCPIDAITHDDRNYVVKADVCNACNACLSPCPTGAI 61 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHDDR 37 >gi|300820689|ref|ZP_07100840.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 119-7] gi|331669620|ref|ZP_08370466.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA271] gi|331678871|ref|ZP_08379545.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H591] gi|300526953|gb|EFK48022.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 119-7] gi|331063288|gb|EGI35201.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA271] gi|331073701|gb|EGI45022.1| putative oxidoreductase, Fe-S subunit [Escherichia coli H591] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|270490039|ref|ZP_06207113.1| 4Fe-4S binding domain protein [Yersinia pestis KIM D27] gi|270338543|gb|EFA49320.1| 4Fe-4S binding domain protein [Yersinia pestis KIM D27] Length = 211 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ C C CV CP + E + + ++ D C+ C CE CP A + D Sbjct: 65 SYYLSIACNHCSSPTCVTGCPTGAMHKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFDA 124 Query: 60 EPGL 63 + L Sbjct: 125 KKQL 128 >gi|161523689|ref|YP_001578701.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351547|ref|YP_001947175.1| putative ferredoxin [Burkholderia multivorans ATCC 17616] gi|221199980|ref|ZP_03573023.1| ferredoxin [Burkholderia multivorans CGD2M] gi|221206865|ref|ZP_03579877.1| ferredoxin [Burkholderia multivorans CGD2] gi|160341118|gb|ABX14204.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia multivorans ATCC 17616] gi|189335569|dbj|BAG44639.1| putative ferredoxin [Burkholderia multivorans ATCC 17616] gi|221173520|gb|EEE05955.1| ferredoxin [Burkholderia multivorans CGD2] gi|221180219|gb|EEE12623.1| ferredoxin [Burkholderia multivorans CGD2M] Length = 87 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|668987|emb|CAA59063.1| NADH dehydrogenase [Solanum tuberosum] Length = 229 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 184 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 128 ERCIACKLCEAICPAQAITIEAEERED 154 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 169 CIYCGF--CQEACPVDAIVEGPNF 190 >gi|220932673|ref|YP_002509581.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] gi|219993983|gb|ACL70586.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] Length = 288 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 23/118 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C + C +VC + G I+P +C CG C CP DA++ ++ Sbjct: 66 DLCIDCGY--CRQVCNFNAITPG---FEINPIKCEGCGTCVAMCPQDALELKEVETGNVY 120 Query: 67 L-------------KINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 + I +E + + + K A + G + K PG Sbjct: 121 ISKTEFLPMVHARLNIGAENSGKLVSEVKKL-----ADNIAGREGKDLILVDGPPGIG 173 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 15/29 (51%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKP 57 G +PD CIDCG C C +AI P Sbjct: 57 GGKLAVKNPDLCIDCGYCRQVCNFNAITP 85 >gi|254449088|ref|ZP_05062540.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium HTCC5015] gi|198261280|gb|EDY85573.1| 4Fe-4S ferredoxin, iron-sulfur binding [gamma proteobacterium HTCC5015] Length = 93 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 37/90 (41%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C C VCP Y+GE I PD C +C C CPVD Sbjct: 1 MALKITDECINCDV--CEPVCPNQAIYQGEEIFEIDPDLCTECVGHYGEPQCVEICPVDC 58 Query: 55 I-----KPDTEPGLELWLKINSEYATQWPN 79 I KP+TE L L + E P Sbjct: 59 IPKDENKPETEAELMLKYERLIELGQTTPT 88 >gi|194438990|ref|ZP_03071074.1| formate hydrogenlyase, subunit B [Escherichia coli 101-1] gi|253772421|ref|YP_003035252.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162655|ref|YP_003045763.1| hydrogenase 3, Fe-S subunit [Escherichia coli B str. REL606] gi|297517737|ref|ZP_06936123.1| hydrogenase 3, Fe-S subunit [Escherichia coli OP50] gi|300930582|ref|ZP_07145974.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|194422111|gb|EDX38114.1| formate hydrogenlyase, subunit B [Escherichia coli 101-1] gi|242378280|emb|CAQ33056.1| hydrogenase 3, Fe-S subunit, subunit of hydrogenase 3 and formate hydrogenlyase complex [Escherichia coli BL21(DE3)] gi|253323465|gb|ACT28067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974556|gb|ACT40227.1| hydrogenase 3, Fe-S subunit [Escherichia coli B str. REL606] gi|253978723|gb|ACT44393.1| hydrogenase 3, Fe-S subunit [Escherichia coli BL21(DE3)] gi|300461524|gb|EFK25017.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|323960616|gb|EGB56242.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323971547|gb|EGB66780.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|163802833|ref|ZP_02196722.1| electron transport complex protein RnfB [Vibrio sp. AND4] gi|159173373|gb|EDP58196.1| electron transport complex protein RnfB [Vibrio sp. AND4] Length = 197 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVSPCPTDCIEMIPV 164 Query: 60 EPGLELWL-KINS 71 E E W K+N+ Sbjct: 165 ETTTESWKWKLNA 177 >gi|145590639|ref|YP_001152641.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282407|gb|ABP49989.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 215 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+ CP + E+ L ++ + CI CG C CP A Sbjct: 81 FVPKQCNHCENAPCVKPCPTGATYKRVEDGLVLVNDELCIGCGACIQACPYGA 133 >gi|89893640|ref|YP_517127.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89333088|dbj|BAE82683.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 206 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAI-HPDECIDCGVCEPECPVDA 54 + + C C + CV+ CPV + E+ L I D+CI C +C CP +A Sbjct: 59 HHIPVGCQHCANPACVKACPVGATYKREEDGLVIQDYDKCIGCRMCMVACPYNA 112 >gi|22125415|ref|NP_668838.1| anaerobic dimethyl sulfoxide reductase subunit B [Yersinia pestis KIM 10] gi|45442368|ref|NP_993907.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Microtus str. 91001] gi|51597008|ref|YP_071199.1| dimethyl sulfoxide reductase chain B protein [Yersinia pseudotuberculosis IP 32953] gi|108808149|ref|YP_652065.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Antiqua] gi|108811579|ref|YP_647346.1| dimethyl sulfoxide reductase chain B protein [Yersinia pestis Nepal516] gi|145599349|ref|YP_001163425.1| dimethyl sulfoxide reductase chain B protein [Yersinia pestis Pestoides F] gi|149365169|ref|ZP_01887204.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis CA88-4125] gi|153949240|ref|YP_001400322.1| anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|162418735|ref|YP_001607117.1| putative anaerobic dimethyl sulfoxide reductase subunit B [Yersinia pestis Angola] gi|165926845|ref|ZP_02222677.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939206|ref|ZP_02227756.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011245|ref|ZP_02232143.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212433|ref|ZP_02238468.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399313|ref|ZP_02304837.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421332|ref|ZP_02313085.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424462|ref|ZP_02316215.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468500|ref|ZP_02333204.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis FV-1] gi|170023696|ref|YP_001720201.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis YPIII] gi|186896091|ref|YP_001873203.1| dimethylsulfoxide reductase subunit B [Yersinia pseudotuberculosis PB1/+] gi|218930015|ref|YP_002347890.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis CO92] gi|229838554|ref|ZP_04458713.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895620|ref|ZP_04510791.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Pestoides A] gi|229899120|ref|ZP_04514263.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901853|ref|ZP_04516974.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Nepal516] gi|294504721|ref|YP_003568783.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Z176003] gi|21958302|gb|AAM85089.1|AE013754_11 anaerobic dimethyl sulfoxide reductase subunit B [Yersinia pestis KIM 10] gi|45437232|gb|AAS62784.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Microtus str. 91001] gi|51590290|emb|CAH21927.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pseudotuberculosis IP 32953] gi|108775227|gb|ABG17746.1| dimethyl sulfoxide reductase chain B protein [Yersinia pestis Nepal516] gi|108780062|gb|ABG14120.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Antiqua] gi|115348626|emb|CAL21570.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis CO92] gi|145211045|gb|ABP40452.1| dimethyl sulfoxide reductase chain B protein [Yersinia pestis Pestoides F] gi|149291582|gb|EDM41656.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis CA88-4125] gi|152960735|gb|ABS48196.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pseudotuberculosis IP 31758] gi|162351550|gb|ABX85498.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis Angola] gi|165912806|gb|EDR31433.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165921196|gb|EDR38420.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989923|gb|EDR42224.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166206364|gb|EDR50844.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960821|gb|EDR56842.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051817|gb|EDR63225.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056344|gb|EDR66113.1| putative anaerobic dimethyl sulfoxide reductase, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750230|gb|ACA67748.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis YPIII] gi|186699117|gb|ACC89746.1| dimethylsulfoxide reductase, chain B [Yersinia pseudotuberculosis PB1/+] gi|229680749|gb|EEO76844.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Nepal516] gi|229687522|gb|EEO79595.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694920|gb|EEO84967.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701426|gb|EEO89454.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Pestoides A] gi|262362783|gb|ACY59504.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis D106004] gi|262366708|gb|ACY63265.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis D182038] gi|294355180|gb|ADE65521.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis Z176003] gi|320014482|gb|ADV98053.1| putative dimethyl sulfoxide reductase chain B protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 205 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ C C CV CP + E + + ++ D C+ C CE CP A + D Sbjct: 59 SYYLSIACNHCSSPTCVTGCPTGAMHKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFDA 118 Query: 60 EPGL 63 + L Sbjct: 119 KKQL 122 >gi|333016073|gb|EGK35405.1| protein aegA [Shigella flexneri K-227] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|333001599|gb|EGK21167.1| protein aegA [Shigella flexneri VA-6] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|332086656|gb|EGI91796.1| tat (twin-arginine translocation) pathway signal sequence domain protein [Shigella boydii 5216-82] Length = 328 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + +H D+ C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKYVCTGCRYCMVACPYNVPKYD 163 >gi|242399493|ref|YP_002994918.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit F [Thermococcus sibiricus MM 739] gi|242265887|gb|ACS90569.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit F [Thermococcus sibiricus MM 739] Length = 602 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++TE C C T C +CPV G+ L I+ + CI CG C C +AI+ Sbjct: 542 IITEKCTGC--TACAIMCPVKAISGERGKPHL-INQEACIKCGTCYEVCRFNAIE 593 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 12/27 (44%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 I ++C C C CPV AI + Sbjct: 539 KYVIITEKCTGCTACAIMCPVKAISGE 565 >gi|237748883|ref|ZP_04579363.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes OXCC13] gi|229380245|gb|EEO30336.1| NADH-quinone oxidoreductase subunit I [Oxalobacter formigenes OXCC13] Length = 162 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG+CE CPVDAI Sbjct: 61 EKCIGCKL--CESVCPAKAILIETEEREDGTRRTTRYDIDQSKCIFCGLCEEACPVDAI 117 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 ++CI C +CE CP AI +TE + Sbjct: 61 EKCIGCKLCESVCPAKAILIETEERED 87 >gi|283797938|ref|ZP_06347091.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|291074405|gb|EFE11769.1| putative 4Fe-4S binding domain protein [Clostridium sp. M62/1] gi|295091868|emb|CBK77975.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Clostridium cf. saccharolyticum K10] Length = 209 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y VT+ CI CK C CP C + +AI + C+ CG C CP A++ Sbjct: 153 YFVTDKCIGCKL--CYSKCPQKCIDITQKPVAIEQEHCLHCGNCFEICPAGAVE 204 >gi|239616590|ref|YP_002939912.1| NADH dehydrogenase (quinone) [Kosmotoga olearia TBF 19.5.1] gi|239505421|gb|ACR78908.1| NADH dehydrogenase (quinone) [Kosmotoga olearia TBF 19.5.1] Length = 599 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 E C+ C T C VCPV+ I P+ C CG C C DAIK Sbjct: 547 EKCVGC--TACARVCPVNGIIGDIRKPHRIDPEICTRCGSCIEVCRFDAIK 595 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 CP E + I ++C+ C C CPV+ I D + +I Sbjct: 531 CPAKRCKELTR-VVIDEEKCVGCTACARVCPVNGIIGDIRKPHRIDPEI 578 >gi|114567439|ref|YP_754593.1| ferredoxin hydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338374|gb|ABI69222.1| Ferredoxin hydrogenase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 387 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 V+++C C H C +CP E I P +CI+CG C CP +AI Sbjct: 12 VSDDCKACDH--CTFICPTGAISGELGQKHHISPKKCINCGQCLINCPFNAI 61 >gi|328952814|ref|YP_004370148.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453138|gb|AEB08967.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1029 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLE 64 NC C C+ +CP GE IH + C CG+C +CP AI TEP LE Sbjct: 956 NCRRCL--SCLAICPFGAVSLGEKGRPTIHVELCRGCGLCAAQCPAQAISMSRLTEPELE 1013 Query: 65 -----LWLKINSE 72 + ++ E Sbjct: 1014 AQIHGSFFALDRE 1026 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 28/84 (33%), Gaps = 25/84 (29%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEGENFL---------------AIHPDEC---- 40 YV C C +C VCPV D + +G N I+P C Sbjct: 116 YVNISACTGCG--ECTRVCPVKMPDPYNQGLNQTKAIHLPFPQAVPLAAIINPQVCRFFQ 173 Query: 41 -IDCGVCEPECPVDAIKPDTEPGL 63 CG C CP AI +P Sbjct: 174 GKKCGACIKVCPAGAINLQEQPEE 197 >gi|300814154|ref|ZP_07094437.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511811|gb|EFK39028.1| electron transport complex, RnfABCDGE type, B subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 317 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI CK C + CP D + +N I ++CI+CG C CP AI + + + Sbjct: 217 CISCK--MCEKNCPKDAIHVEDNLARIDYEKCINCGKCVSVCPTGAIFCEYPDRVAKMKE 274 Score = 40.1 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CV VC D + + ++C+ C C CP IK Sbjct: 144 CGGGTCVSVCEFDAIHMVNGVAQVDKEKCVACMKCINICPKGIIK 188 >gi|256823445|ref|YP_003147408.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Kangiella koreensis DSM 16069] gi|256796984|gb|ACV27640.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kangiella koreensis DSM 16069] Length = 86 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C C CP + Y+GE I PD+C +C C+ CPVD Sbjct: 1 MALKITDECINCDV--CEPECPNEAIYQGEEIYEIDPDKCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I D E + N E ++ +T K Sbjct: 59 IPLDEEHP-----ETNEELIVKYEKLTGNK 83 >gi|189460626|ref|ZP_03009411.1| hypothetical protein BACCOP_01267 [Bacteroides coprocola DSM 17136] gi|189432585|gb|EDV01570.1| hypothetical protein BACCOP_01267 [Bacteroides coprocola DSM 17136] Length = 323 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDA 54 V E+C +C +C+EVCP ++ I D CI C C ECP A Sbjct: 248 VCNEDCFVCG--ECIEVCPTHAIRISDDGSHIETDVNRCIRCCACVKECPNGA 298 >gi|89896469|ref|YP_519956.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89335917|dbj|BAE85512.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 206 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+VCPV Y+ E + I+ D CI C C CP +A Sbjct: 65 ACQHCENAACVKVCPVGATYKDELGRVVINYDRCIGCRFCMAACPYNA 112 >gi|116754516|ref|YP_843634.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanosaeta thermophila PT] gi|116665967|gb|ABK14994.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanosaeta thermophila PT] Length = 368 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 4/74 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M Y E C C C++ CP + I C+ CG C C A+ D Sbjct: 189 MVY--KEKCRGCG--RCMKACPRSAISVVDGKAYIDLGVCVGCGECVRACLERAMDFDWA 244 Query: 61 PGLELWLKINSEYA 74 + +++ EYA Sbjct: 245 VAIPPFVERMVEYA 258 >gi|194436857|ref|ZP_03068957.1| protein aegA [Escherichia coli 101-1] gi|300925134|ref|ZP_07141048.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 182-1] gi|312972873|ref|ZP_07787046.1| uncharacterized protein ygfT [Escherichia coli 1827-70] gi|194424339|gb|EDX40326.1| protein aegA [Escherichia coli 101-1] gi|300418736|gb|EFK02047.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 182-1] gi|310332815|gb|EFQ00029.1| uncharacterized protein ygfT [Escherichia coli 1827-70] gi|332344781|gb|AEE58115.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 644 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|330957741|gb|EGH58001.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 291 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD I DEC C +C CPVD I Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVII-DECTGCDLCIAPCPVDCI 136 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C C+ CPVDC Sbjct: 113 MHTVIIDECTGCDL--CIAPCPVDCI 136 >gi|323498080|ref|ZP_08103085.1| electron transport complex protein RnfB [Vibrio sinaloensis DSM 21326] gi|323316860|gb|EGA69866.1| electron transport complex protein RnfB [Vibrio sinaloensis DSM 21326] Length = 193 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|284929331|ref|YP_003421853.1| NADH:ubiquinone oxidoreductase chain I-like protein [cyanobacterium UCYN-A] gi|284809775|gb|ADB95472.1| NADH:ubiquinone oxidoreductase chain I-like protein [cyanobacterium UCYN-A] Length = 80 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-------LAIHPDECIDCGVCEPECPV-DAI 55 +VT+ C DC E CPV C +EG I CIDCG+C CPV AI Sbjct: 11 IVTKVCEGV--ADCAEACPVACIHEGPGKNLKGTSWYWIDFSVCIDCGICLQVCPVKGAI 68 Query: 56 KPDTEPGLEL 65 + P + Sbjct: 69 IAEERPEYQE 78 >gi|238760425|ref|ZP_04621564.1| Electron transport complex protein rnfB [Yersinia aldovae ATCC 35236] gi|238701377|gb|EEP93955.1| Electron transport complex protein rnfB [Yersinia aldovae ATCC 35236] Length = 207 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVAPCPTDCIE 163 >gi|224077832|ref|XP_002305427.1| predicted protein [Populus trichocarpa] gi|222848391|gb|EEE85938.1| predicted protein [Populus trichocarpa] Length = 222 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|213424374|ref|ZP_03357198.1| hydrogenase 2 protein HybA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 261 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|45358921|ref|NP_988478.1| ferredoxin [Methanococcus maripaludis S2] gi|45047787|emb|CAF30914.1| ferredoxin [Methanococcus maripaludis S2] Length = 132 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV CPV E F + + DECI C C CPV+AIK Sbjct: 80 EKCIDCG--ACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIK 128 Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Query: 26 FYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTE 60 F E E+ I ++CIDCG C CPV A+ D E Sbjct: 65 FGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEE 102 >gi|323704270|ref|ZP_08115849.1| NADH dehydrogenase (quinone) [Thermoanaerobacterium xylanolyticum LX-11] gi|323536336|gb|EGB26108.1| NADH dehydrogenase (quinone) [Thermoanaerobacterium xylanolyticum LX-11] Length = 596 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + C C C + CP + I D+CI CG C +CP DAI Sbjct: 546 DKCKGCG--ICAKNCPTNAISGKVKQPHVIDQDKCIKCGTCMDKCPFDAIY 594 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CP +AI Sbjct: 530 CPAG-VCQALLKFRIDPDKCKGCGICAKNCPTNAI 563 >gi|206560783|ref|YP_002231548.1| ferredoxin [Burkholderia cenocepacia J2315] gi|198036825|emb|CAR52725.1| putative electron transport-related protein [Burkholderia cenocepacia J2315] Length = 303 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 80 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCIAMLPV 137 Query: 59 --TEPGLELWLKINSEYATQ 76 G E W + ++ A + Sbjct: 138 TGDRTGWEAWSQEQADAARE 157 >gi|187477071|ref|YP_785095.1| ferredoxin [Bordetella avium 197N] gi|115421657|emb|CAJ48167.1| ferredoxin [Bordetella avium 197N] Length = 84 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + GE++ I PD C +C C+ CPV+ Sbjct: 1 MALLITDECINCDV--CEPQCPNEAISMGEDYYVIDPDLCTECVGHYDEPQCKVVCPVEC 58 Query: 55 IK--PDTEPGLE 64 I+ P + G E Sbjct: 59 IELHPQWKEGQE 70 >gi|56698380|ref|YP_168753.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] gi|56680117|gb|AAV96783.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3] Length = 268 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 100 SCLHCEDAPCVTVCPTGASYKRSEDGIVLVNESDCIGCGLCAWACPYGARELDLAEG 156 >gi|28898786|ref|NP_798391.1| tetrathionate reductase subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|260364141|ref|ZP_05776847.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus K5030] gi|260877224|ref|ZP_05889579.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AN-5034] gi|260897830|ref|ZP_05906326.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus Peru-466] gi|28807005|dbj|BAC60275.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus RIMD 2210633] gi|308087620|gb|EFO37315.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus Peru-466] gi|308090343|gb|EFO40038.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AN-5034] gi|308115222|gb|EFO52762.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus K5030] Length = 255 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|114566201|ref|YP_753355.1| NADH dehydrogenase (quinone) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337136|gb|ABI67984.1| NADH dehydrogenase (quinone) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 590 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 Y++ + C+ C CV CP DC GEN I + C CG C CP Sbjct: 530 YIIDPDRCMGCGL--CVYACPADCIKGGENNQPYYIEQENCSKCGACLDICP 579 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I PD C+ CG+C CP D IK E +++ Sbjct: 529 QYIIDPDRCMGCGLCVYACPADCIKGG-ENNQPYYIE 564 >gi|332305736|ref|YP_004433587.1| electron transport complex, RnfABCDGE type, B subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173065|gb|AEE22319.1| electron transport complex, RnfABCDGE type, B subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 188 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 111 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVDPCPVDCI 163 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 VE +D + E+ I DECI C C CPVDAI Sbjct: 93 VEATSLDAAHGTEDIKKVAYIREDECIGCTKCIQACPVDAI 133 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV+ CPVDC Sbjct: 140 MHTVISDECTGCDL--CVDPCPVDCI 163 >gi|282882923|ref|ZP_06291528.1| electron transport complex, rnfaBcdge type, b subunit [Peptoniphilus lacrimalis 315-B] gi|281297334|gb|EFA89825.1| electron transport complex, rnfaBcdge type, b subunit [Peptoniphilus lacrimalis 315-B] Length = 317 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI CK C + CP D + +N I ++CI+CG C CP AI + + + Sbjct: 217 CISCK--MCEKNCPKDAIHVEDNLARIDYEKCINCGKCVSVCPTGAIFCEYPDRVAKMKE 274 Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CV VC D + + ++C+ C C CP IK Sbjct: 144 CGGGTCVSVCEFDAIHMVNGVAQVDKEKCVACMKCINICPKGIIK 188 >gi|288932304|ref|YP_003436364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894552|gb|ADC66089.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 127 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 TE C+ C C+ VCP F GE+ + ++ +CI CG C CP+ A++ Sbjct: 75 TEKCVDCG--ACISVCPTGVFERGEDDRIVVNEVKCIRCGFCVGVCPLKALR 124 >gi|238921129|ref|YP_002934644.1| 4Fe-4S binding domain protein [Edwardsiella ictaluri 93-146] gi|238870698|gb|ACR70409.1| 4Fe-4S binding domain protein [Edwardsiella ictaluri 93-146] Length = 204 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C+ C VCPV+ + + ++ C+ C +C CP AI Sbjct: 49 QMCHHCEDAPCALVCPVNAITRQDGAIQLNESLCVGCKLCGIACPFGAI 97 >gi|224437244|ref|ZP_03658221.1| ferredoxin [Helicobacter cinaedi CCUG 18818] gi|313143705|ref|ZP_07805898.1| ferredoxin [Helicobacter cinaedi CCUG 18818] gi|313128736|gb|EFR46353.1| ferredoxin [Helicobacter cinaedi CCUG 18818] Length = 83 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ CI C C E CP EG+ +I PD C +C C CPVDA Sbjct: 1 MALMINNECIACD--ACAEECPNGAIEEGDPIYSIDPDVCTECVGSYDEPSCLSVCPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|254509402|ref|ZP_05121485.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 16] gi|219547676|gb|EED24718.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 16] Length = 193 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 159 >gi|116515045|ref|YP_802674.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285559|sp|Q057W8|NUOI_BUCCC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|116256899|gb|ABJ90581.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 181 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 +E C+ C C VCPV+C E +N I+ CI CG+CE CP AI Sbjct: 57 SERCVACNL--CSAVCPVNCISLKKSEEKNGRWYAKSFQINLSRCIFCGLCEEACPTMAI 114 Query: 56 K--PDTEPGLELWLKI 69 + PD E ++ Sbjct: 115 QLTPDIELSEFKRKEL 130 >gi|126700934|ref|YP_001089831.1| electron transport protein [Clostridium difficile 630] gi|115252371|emb|CAJ70212.1| putative oxidoreductase, Fe-S subunit [Clostridium difficile] Length = 183 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C+ CP + N ++++ ++CI C C CP AI Sbjct: 65 CRHCEDAPCLNSCPQKAIVKENNIMSVNEEKCIGCKTCLLACPFGAI 111 >gi|90417027|ref|ZP_01224956.1| electron transport complex protein RnfB [marine gamma proteobacterium HTCC2207] gi|90331374|gb|EAS46618.1| electron transport complex protein RnfB [marine gamma proteobacterium HTCC2207] Length = 209 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 115 AYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIADECTGCDLCVEPCPVDCI 167 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 144 MHTVIADECTGCDL--CVEPCPVDCI 167 >gi|37680406|ref|NP_935015.1| tetrathionate reductase, subunit B [Vibrio vulnificus YJ016] gi|37199153|dbj|BAC94986.1| tetrathionate reductase, subunit B [Vibrio vulnificus YJ016] Length = 255 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ E+ + + C+ C C CP DA Sbjct: 109 CNHCDNPPCVAVCPVQATYQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|281601872|gb|ADA74856.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2002017] Length = 654 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|159905593|ref|YP_001549255.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887086|gb|ABX02023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 393 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 17/70 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF---------------LAIHPDECIDCGV 45 M T +CI C +CVE CP + G L I + C+ CG Sbjct: 76 MPVFDTGSCINCG--NCVESCPTNVLEMGTLRKEANELLWNVPKLVNLVIDEEVCVSCGS 133 Query: 46 CEPECPVDAI 55 CE CPV+AI Sbjct: 134 CENACPVNAI 143 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 E C+ C C CPV+ N L I + C+ C C CPV+ AI EP L Sbjct: 126 EVCVSCG--SCENACPVNAISHNSNGLYEIDVNLCVSCKNCVEACPVENAIVTYDEPKLS 183 Query: 65 LWLKI 69 ++I Sbjct: 184 EQIEI 188 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 8/56 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C + C E CP D +N CI+CG C CP + ++ Sbjct: 47 EKCISC--SACAESCPSDAITIEYNEEFKKNMPVFDTGSCINCGNCVESCPTNVLE 100 Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++ E CI C C C V + N I+P+ C+ C +C CPVDA+ Sbjct: 276 YIIDEEKCIGC--RICYRACNVPEAISISKETNLPYINPEYCVRCAICRNVCPVDAV 330 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 10/54 (18%) Query: 12 CKHTDCVEVCPVDCFYEG---------ENFLAIHPDECIDCGVCEPECPV-DAI 55 K C+EVCP G + I ++CI C +C C V +AI Sbjct: 246 VKSGKCLEVCPTTAIRIGIPEKITKRTSDCYIIDEEKCIGCRICYRACNVPEAI 299 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 P++CI C C CP DAI + + Sbjct: 46 PEKCISCSACAESCPSDAITIEYNEEFKK 74 >gi|126641075|ref|YP_001084059.1| putative iron-sulfur protein [Acinetobacter baumannii ATCC 17978] Length = 181 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 8 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 55 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 5 IREDECIGCTKCINACPVDAI 25 >gi|260905039|ref|ZP_05913361.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Brevibacterium linens BL2] Length = 381 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C H C++VCP + E + + + D C CG C CP I+ + Sbjct: 180 SDVCKHCTHAGCLDVCPTGALFRTEFDTVVVQNDVCNGCGTCVAGCPFGVIERRDD 235 >gi|82703846|ref|YP_413412.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosospira multiformis ATCC 25196] gi|82411911|gb|ABB76020.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosospira multiformis ATCC 25196] Length = 86 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP GE + I+PD C +C C CPVD Sbjct: 1 MALMITDECINCDV--CQPECPNSAISPGEEYYEINPDLCTECVGHHEESQCVEVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQW 77 DECI+C VC+PECP AI P E + +IN + T+ Sbjct: 7 DECINCDVCQPECPNSAISPG-----EEYYEINPDLCTEC 41 >gi|78067605|ref|YP_370374.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia sp. 383] gi|77968350|gb|ABB09730.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia sp. 383] Length = 88 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|89073353|ref|ZP_01159877.1| electron transport complex protein RnfB [Photobacterium sp. SKA34] gi|89050840|gb|EAR56314.1| electron transport complex protein RnfB [Photobacterium sp. SKA34] Length = 194 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 -DTEPGLEL 65 +T + Sbjct: 165 KETPDNWKW 173 >gi|109899273|ref|YP_662528.1| electron transport complex protein RnfB [Pseudoalteromonas atlantica T6c] gi|109701554|gb|ABG41474.1| electron transport complex, RnfABCDGE type, B subunit [Pseudoalteromonas atlantica T6c] Length = 188 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 111 AFIREDECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVDPCPVDCI 163 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CV+ CPVDC Sbjct: 140 MHTVISDECTGCDL--CVDPCPVDCI 163 >gi|311278319|ref|YP_003940550.1| electron transport protein HydN [Enterobacter cloacae SCF1] gi|308747514|gb|ADO47266.1| electron transport protein HydN [Enterobacter cloacae SCF1] Length = 175 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 55 ATACRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|260550717|ref|ZP_05824925.1| electron transport complex [Acinetobacter sp. RUH2624] gi|260406223|gb|EEW99707.1| electron transport complex [Acinetobacter sp. RUH2624] Length = 263 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ I D C C +C P CPVD I Sbjct: 90 DECIGC--TKCINACPVDAIIGSGKLMHTILTDLCTGCELCIPPCPVDCI 137 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAI 55 PV + AI DECI C C CPVDAI Sbjct: 73 PVQADGRPQRMKAIIREDECIGCTKCINACPVDAI 107 >gi|238919751|ref|YP_002933266.1| 4Fe-4S binding domain protein [Edwardsiella ictaluri 93-146] gi|238869320|gb|ACR69031.1| 4Fe-4S binding domain protein [Edwardsiella ictaluri 93-146] Length = 190 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C C CV VCP + +N + + CI C C CP D G Sbjct: 61 SCQHCADAPCVSVCPTGASFRDDNGIVQVDKSRCIGCDYCVAACPFHVRYLDPRSG 116 >gi|167761226|ref|ZP_02433353.1| hypothetical protein CLOSCI_03631 [Clostridium scindens ATCC 35704] gi|167660892|gb|EDS05022.1| hypothetical protein CLOSCI_03631 [Clostridium scindens ATCC 35704] Length = 595 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CP D + I+ D+C+ CG C +C AI + Sbjct: 544 ADKCKGC--TLCARTCPNDAITGAVKEPHVINQDKCVKCGACMEKCRFGAIYKE 595 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I D+C C +C CP DAI Sbjct: 529 CPAG-VCKALLSYKIDADKCKGCTLCARTCPNDAI 562 >gi|89896641|ref|YP_520128.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89336089|dbj|BAE85684.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 183 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C C +VCP Y+ E+ + I +CI C C CP +A Sbjct: 59 CQHCDDAPCQKVCPTGATYKREDGIVLIDAQKCIGCKYCMVACPYNA 105 >gi|74312993|ref|YP_311412.1| putative oxidoreductase Fe-S binding subunit [Shigella sonnei Ss046] gi|73856470|gb|AAZ89177.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|74313291|ref|YP_311710.1| small subunit of hydrogenase-3, iron-sulfur protein [Shigella sonnei Ss046] gi|73856768|gb|AAZ89475.1| probable small subunit of hydrogenase-3, iron-sulfur protein [Shigella sonnei Ss046] gi|323167101|gb|EFZ52819.1| hydrogenase-4 component A [Shigella sonnei 53G] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRIDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|16130631|ref|NP_417204.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|24114015|ref|NP_708525.1| small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Shigella flexneri 2a str. 301] gi|26249123|ref|NP_755163.1| formate hydrogenlyase subunit 2 [Escherichia coli CFT073] gi|30064078|ref|NP_838249.1| small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Shigella flexneri 2a str. 2457T] gi|89109511|ref|AP_003291.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K-12 substr. W3110] gi|110642847|ref|YP_670577.1| formate hydrogenase-3 component B [Escherichia coli 536] gi|110806649|ref|YP_690169.1| small subunit of hydrogenase-3, iron-sulfur protein [Shigella flexneri 5 str. 8401] gi|157162170|ref|YP_001459488.1| formate hydrogenlyase, subunit B [Escherichia coli HS] gi|170019030|ref|YP_001723984.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|170082300|ref|YP_001731620.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|170684164|ref|YP_001744873.1| formate hydrogenlyase, subunit B [Escherichia coli SMS-3-5] gi|191171371|ref|ZP_03032920.1| formate hydrogenlyase, subunit B [Escherichia coli F11] gi|215488040|ref|YP_002330471.1| hydrogenase 3, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218690848|ref|YP_002399060.1| hydrogenase 3, Fe-S subunit [Escherichia coli ED1a] gi|218706218|ref|YP_002413737.1| hydrogenase 3, Fe-S subunit [Escherichia coli UMN026] gi|227888262|ref|ZP_04006067.1| hydrogenase 3, Fe-S subunit [Escherichia coli 83972] gi|238901861|ref|YP_002927657.1| hydrogenase 3, Fe-S subunit [Escherichia coli BW2952] gi|254037764|ref|ZP_04871822.1| hydrogenase 3 [Escherichia sp. 1_1_43] gi|256019497|ref|ZP_05433362.1| hydrogenase 3, Fe-S subunit [Shigella sp. D9] gi|256024769|ref|ZP_05438634.1| hydrogenase 3, Fe-S subunit [Escherichia sp. 4_1_40B] gi|260856831|ref|YP_003230722.1| hydrogenase 3, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|260869399|ref|YP_003235801.1| hydrogenase 3, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|293406216|ref|ZP_06650142.1| formate hydrogenlyase subunit 2 [Escherichia coli FVEC1412] gi|293412082|ref|ZP_06654805.1| formate hydrogenlyase subunit 2 [Escherichia coli B354] gi|293415974|ref|ZP_06658614.1| hycB formate hydrogenlyase subunit 2 [Escherichia coli B185] gi|293449040|ref|ZP_06663461.1| hycB [Escherichia coli B088] gi|298381953|ref|ZP_06991550.1| formate hydrogenlyase subunit 2 [Escherichia coli FVEC1302] gi|300899963|ref|ZP_07118166.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300906773|ref|ZP_07124455.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300919240|ref|ZP_07135763.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300946998|ref|ZP_07161224.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300954964|ref|ZP_07167376.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300975040|ref|ZP_07172841.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|300976816|ref|ZP_07173633.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|301027134|ref|ZP_07190503.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|301027393|ref|ZP_07190732.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|301049519|ref|ZP_07196477.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|301305385|ref|ZP_07211479.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301645296|ref|ZP_07245246.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|307139411|ref|ZP_07498767.1| hydrogenase 3, Fe-S subunit [Escherichia coli H736] gi|312965018|ref|ZP_07779258.1| hydrogenase-4 component A [Escherichia coli 2362-75] gi|312973066|ref|ZP_07787239.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|331643408|ref|ZP_08344539.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H736] gi|331658832|ref|ZP_08359774.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA206] gi|331664278|ref|ZP_08365184.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA143] gi|331674232|ref|ZP_08374992.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA280] gi|331684337|ref|ZP_08384929.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H299] gi|332280618|ref|ZP_08393031.1| formate hydrogenlyase subunit 2 [Shigella sp. D9] gi|77417742|sp|P0AAK2|HYCB_ECOL6 RecName: Full=Formate hydrogenlyase subunit 2; Short=FHL subunit 2; AltName: Full=Hydrogenase-3 component B gi|77417743|sp|P0AAK1|HYCB_ECOLI RecName: Full=Formate hydrogenlyase subunit 2; Short=FHL subunit 2; AltName: Full=Hydrogenase-3 component B gi|77417744|sp|P0AAK3|HYCB_SHIFL RecName: Full=Formate hydrogenlyase subunit 2; Short=FHL subunit 2; AltName: Full=Hydrogenase-3 component B gi|26109530|gb|AAN81733.1|AE016765_135 Formate hydrogenlyase subunit 2 [Escherichia coli CFT073] gi|882617|gb|AAA69234.1| formate hydrogenlyase subunit 2 [Escherichia coli str. K-12 substr. MG1655] gi|1789079|gb|AAC75766.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K-12 substr. MG1655] gi|24053135|gb|AAN44232.1| probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Shigella flexneri 2a str. 301] gi|30042334|gb|AAP18059.1| probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Shigella flexneri 2a str. 2457T] gi|85675545|dbj|BAE76801.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K12 substr. W3110] gi|110344439|gb|ABG70676.1| formate hydrogenase-3 component B [Escherichia coli 536] gi|110616197|gb|ABF04864.1| probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Shigella flexneri 5 str. 8401] gi|157067850|gb|ABV07105.1| formate hydrogenlyase, subunit B [Escherichia coli HS] gi|169753958|gb|ACA76657.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|169890135|gb|ACB03842.1| hydrogenase 3, Fe-S subunit [Escherichia coli str. K-12 substr. DH10B] gi|170521882|gb|ACB20060.1| formate hydrogenlyase, subunit B [Escherichia coli SMS-3-5] gi|190908305|gb|EDV67895.1| formate hydrogenlyase, subunit B [Escherichia coli F11] gi|215266112|emb|CAS10537.1| hydrogenase 3, Fe-S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218428412|emb|CAR09337.2| hydrogenase 3, Fe-S subunit [Escherichia coli ED1a] gi|218433315|emb|CAR14215.1| hydrogenase 3, Fe-S subunit [Escherichia coli UMN026] gi|226839388|gb|EEH71409.1| hydrogenase 3 [Escherichia sp. 1_1_43] gi|227834531|gb|EEJ44997.1| hydrogenase 3, Fe-S subunit [Escherichia coli 83972] gi|238861455|gb|ACR63453.1| hydrogenase 3, Fe-S subunit [Escherichia coli BW2952] gi|257755480|dbj|BAI26982.1| hydrogenase 3, Fe-S subunit [Escherichia coli O26:H11 str. 11368] gi|257765755|dbj|BAI37250.1| hydrogenase 3, Fe-S subunit [Escherichia coli O111:H- str. 11128] gi|260448226|gb|ACX38648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|281602089|gb|ADA75073.1| Formate hydrogenlyase subunit 2 [Shigella flexneri 2002017] gi|284922660|emb|CBG35748.1| formate hydrogenlyase subunit 2 [Escherichia coli 042] gi|291322130|gb|EFE61559.1| hycB [Escherichia coli B088] gi|291426222|gb|EFE99254.1| formate hydrogenlyase subunit 2 [Escherichia coli FVEC1412] gi|291432163|gb|EFF05145.1| hycB formate hydrogenlyase subunit 2 [Escherichia coli B185] gi|291468853|gb|EFF11344.1| formate hydrogenlyase subunit 2 [Escherichia coli B354] gi|298277093|gb|EFI18609.1| formate hydrogenlyase subunit 2 [Escherichia coli FVEC1302] gi|299879307|gb|EFI87518.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|300298750|gb|EFJ55135.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|300308808|gb|EFJ63328.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|300318099|gb|EFJ67883.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300356472|gb|EFJ72342.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300395166|gb|EFJ78704.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300401467|gb|EFJ85005.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300410002|gb|EFJ93540.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|300413685|gb|EFJ96995.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300453385|gb|EFK17005.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300839305|gb|EFK67065.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301076414|gb|EFK91220.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|307554699|gb|ADN47474.1| formate hydrogenlyase subunit 2 [Escherichia coli ABU 83972] gi|309703083|emb|CBJ02415.1| formate hydrogenlyase subunit 2 [Escherichia coli ETEC H10407] gi|310333008|gb|EFQ00222.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|312290574|gb|EFR18454.1| hydrogenase-4 component A [Escherichia coli 2362-75] gi|313648200|gb|EFS12645.1| hydrogenase-4 component A [Shigella flexneri 2a str. 2457T] gi|315137331|dbj|BAJ44490.1| formate hydrogenlyase subunit 2 [Escherichia coli DH1] gi|315254506|gb|EFU34474.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|315293719|gb|EFU53071.1| 4Fe-4S binding domain protein [Escherichia coli MS 153-1] gi|323154940|gb|EFZ41132.1| hydrogenase-4 component A [Escherichia coli EPECa14] gi|323172988|gb|EFZ58619.1| hydrogenase-4 component A [Escherichia coli LT-68] gi|323180145|gb|EFZ65697.1| hydrogenase-4 component A [Escherichia coli 1180] gi|323183251|gb|EFZ68648.1| hydrogenase-4 component A [Escherichia coli 1357] gi|323935720|gb|EGB32034.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323941445|gb|EGB37628.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323966871|gb|EGB62300.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|323978666|gb|EGB73748.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] gi|324005686|gb|EGB74905.1| 4Fe-4S binding domain protein [Escherichia coli MS 57-2] gi|324013679|gb|EGB82898.1| 4Fe-4S binding domain protein [Escherichia coli MS 60-1] gi|324119974|gb|EGC13852.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|327251447|gb|EGE63133.1| hydrogenase-4 component A [Escherichia coli STEC_7v] gi|331036879|gb|EGI09103.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H736] gi|331053414|gb|EGI25443.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA206] gi|331058209|gb|EGI30190.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA143] gi|331068326|gb|EGI39721.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA280] gi|331077952|gb|EGI49158.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H299] gi|332102970|gb|EGJ06316.1| formate hydrogenlyase subunit 2 [Shigella sp. D9] gi|332344605|gb|AEE57939.1| hydrogenase-4 component A [Escherichia coli UMNK88] gi|332753437|gb|EGJ83817.1| hydrogenase-4 component A [Shigella flexneri 4343-70] gi|332753946|gb|EGJ84321.1| hydrogenase-4 component A [Shigella flexneri K-671] gi|332755662|gb|EGJ86025.1| hydrogenase-4 component A [Shigella flexneri 2747-71] gi|332765670|gb|EGJ95883.1| 4Fe-4S binding domain protein [Shigella flexneri 2930-71] gi|333000675|gb|EGK20252.1| hydrogenase-4 component A [Shigella flexneri K-218] gi|333001067|gb|EGK20637.1| hydrogenase-4 component A [Shigella flexneri K-272] gi|333015428|gb|EGK34767.1| hydrogenase-4 component A [Shigella flexneri K-227] gi|333015869|gb|EGK35205.1| hydrogenase-4 component A [Shigella flexneri K-304] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|86147960|ref|ZP_01066264.1| electron transport complex protein RnfB [Vibrio sp. MED222] gi|85834285|gb|EAQ52439.1| electron transport complex protein RnfB [Vibrio sp. MED222] Length = 197 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|84393395|ref|ZP_00992154.1| electron transport complex protein RnfB [Vibrio splendidus 12B01] gi|148977611|ref|ZP_01814187.1| electron transport complex protein RnfB [Vibrionales bacterium SWAT-3] gi|218708973|ref|YP_002416594.1| electron transport complex protein RnfB [Vibrio splendidus LGP32] gi|254807928|sp|B7VLT8|RNFB_VIBSL RecName: Full=Electron transport complex protein rnfB gi|84376004|gb|EAP92893.1| electron transport complex protein RnfB [Vibrio splendidus 12B01] gi|145963126|gb|EDK28394.1| electron transport complex protein RnfB [Vibrionales bacterium SWAT-3] gi|218321992|emb|CAV18005.1| Electron transport complex protein rnfB [Vibrio splendidus LGP32] Length = 197 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|332087907|gb|EGI93032.1| protein aegA [Shigella boydii 5216-82] Length = 606 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 3 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 47 >gi|323936359|gb|EGB32649.1| glutamate synthase [Escherichia coli E1520] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|310659596|ref|YP_003937317.1| NADH dehydrogenase (quinone) [Clostridium sticklandii DSM 519] gi|308826374|emb|CBH22412.1| NADH dehydrogenase (Quinone) [Clostridium sticklandii] Length = 576 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E C+ C T C + CPV C E + I+ D CI CG C +C DAI Sbjct: 521 YVIDPEKCVGC--TVCAKACPVSCISGERKEPHLINQDACIKCGQCYQKCKFDAI 573 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P++C+ C VC CPV I + + Sbjct: 520 KYVIDPEKCVGCTVCAKACPVSCISGERKEPH 551 >gi|222834638|gb|EEE73101.1| predicted protein [Populus trichocarpa] Length = 187 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ + + + + C+ CG C CP DA I +T+ + Sbjct: 62 CNHCDNPPCVPVCPVQATFQRSDGIVLVDNERCVGCGYCVQACPYDARFINHETQTADK 120 >gi|163783460|ref|ZP_02178451.1| cytochrome b/b6-like protein [Hydrogenivirga sp. 128-5-R1-1] gi|159881224|gb|EDP74737.1| cytochrome b/b6-like protein [Hydrogenivirga sp. 128-5-R1-1] Length = 651 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + C C C E CP + Y E + D+C CG+C C +A D Sbjct: 297 VIEDRCEGC--RQCFEDCPYEAIYMKRISPEEEKAYVIEDKCAGCGICVASCNYNANVID 354 Query: 59 TEP 61 T P Sbjct: 355 TVP 357 >gi|91775091|ref|YP_544847.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methylobacillus flagellatus KT] gi|91709078|gb|ABE49006.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methylobacillus flagellatus KT] Length = 85 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP Y+GE I+P+ C +C C+ CPV Sbjct: 1 MALMITDECINCDV--CEPECPNGAIYQGEEIYEINPNLCTECVGHFSNPQCQDVCPVGC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPHDPDHAETH 69 >gi|15803241|ref|NP_289273.1| small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Escherichia coli O157:H7 EDL933] gi|15832834|ref|NP_311607.1| formate hydrogenlyase subunit-7 component B [Escherichia coli O157:H7 str. Sakai] gi|82778090|ref|YP_404439.1| small subunit of hydrogenase-3, iron-sulfur protein [Shigella dysenteriae Sd197] gi|168749951|ref|ZP_02774973.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4113] gi|168755469|ref|ZP_02780476.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4401] gi|168762877|ref|ZP_02787884.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4501] gi|168768815|ref|ZP_02793822.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4486] gi|168774744|ref|ZP_02799751.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4196] gi|168778706|ref|ZP_02803713.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4076] gi|168787979|ref|ZP_02812986.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC869] gi|168800195|ref|ZP_02825202.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC508] gi|191166789|ref|ZP_03028615.1| formate hydrogenlyase, subunit B [Escherichia coli B7A] gi|193065023|ref|ZP_03046098.1| formate hydrogenlyase, subunit B [Escherichia coli E22] gi|193069629|ref|ZP_03050581.1| formate hydrogenlyase, subunit B [Escherichia coli E110019] gi|194427877|ref|ZP_03060423.1| formate hydrogenlyase, subunit B [Escherichia coli B171] gi|195938474|ref|ZP_03083856.1| formate hydrogenlyase subunit-7 component B [Escherichia coli O157:H7 str. EC4024] gi|208808306|ref|ZP_03250643.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4206] gi|208814125|ref|ZP_03255454.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4045] gi|208820193|ref|ZP_03260513.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4042] gi|209399068|ref|YP_002272187.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4115] gi|209920163|ref|YP_002294247.1| formate hydrogenlyase subunit [Escherichia coli SE11] gi|217327352|ref|ZP_03443435.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. TW14588] gi|218555268|ref|YP_002388181.1| hydrogenase 3, Fe-S subunit [Escherichia coli IAI1] gi|218696318|ref|YP_002403985.1| hydrogenase 3, Fe-S subunit [Escherichia coli 55989] gi|254794664|ref|YP_003079501.1| hydrogenase 3, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|260845367|ref|YP_003223145.1| hydrogenase 3, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|261226018|ref|ZP_05940299.1| hydrogenase 3, Fe-S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261256724|ref|ZP_05949257.1| hydrogenase 3, Fe-S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284051|ref|YP_003500869.1| Formate hydrogenlyase, subunit B [Escherichia coli O55:H7 str. CB9615] gi|300815872|ref|ZP_07096096.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300820499|ref|ZP_07100650.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300922242|ref|ZP_07138368.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|301326241|ref|ZP_07219624.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|307312853|ref|ZP_07592483.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309795184|ref|ZP_07689603.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|331654201|ref|ZP_08355201.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli M718] gi|331669457|ref|ZP_08370303.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA271] gi|331678698|ref|ZP_08379372.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H591] gi|12517172|gb|AAG57831.1|AE005500_10 probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) [Escherichia coli O157:H7 str. EDL933] gi|13363051|dbj|BAB37003.1| formate hydrogenlyase subunit-7 component B [Escherichia coli O157:H7 str. Sakai] gi|81242238|gb|ABB62948.1| probable small subunit of hydrogenase-3, iron-sulfur protein [Shigella dysenteriae Sd197] gi|187769642|gb|EDU33486.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4196] gi|188015781|gb|EDU53903.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4113] gi|189003372|gb|EDU72358.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4076] gi|189357280|gb|EDU75699.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4401] gi|189362046|gb|EDU80465.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4486] gi|189366874|gb|EDU85290.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4501] gi|189372240|gb|EDU90656.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC869] gi|189377473|gb|EDU95889.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC508] gi|190903160|gb|EDV62883.1| formate hydrogenlyase, subunit B [Escherichia coli B7A] gi|192927320|gb|EDV81939.1| formate hydrogenlyase, subunit B [Escherichia coli E22] gi|192956992|gb|EDV87443.1| formate hydrogenlyase, subunit B [Escherichia coli E110019] gi|194414110|gb|EDX30386.1| formate hydrogenlyase, subunit B [Escherichia coli B171] gi|208728107|gb|EDZ77708.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4206] gi|208735402|gb|EDZ84089.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4045] gi|208740316|gb|EDZ87998.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4042] gi|209160468|gb|ACI37901.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. EC4115] gi|209761858|gb|ACI79241.1| formate hydrogenlyase subunit-7 component B [Escherichia coli] gi|209761860|gb|ACI79242.1| formate hydrogenlyase subunit-7 component B [Escherichia coli] gi|209761862|gb|ACI79243.1| formate hydrogenlyase subunit-7 component B [Escherichia coli] gi|209761864|gb|ACI79244.1| formate hydrogenlyase subunit-7 component B [Escherichia coli] gi|209761866|gb|ACI79245.1| formate hydrogenlyase subunit-7 component B [Escherichia coli] gi|209913422|dbj|BAG78496.1| formate hydrogenlyase subunit [Escherichia coli SE11] gi|217319719|gb|EEC28144.1| formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. TW14588] gi|218353050|emb|CAU98875.1| hydrogenase 3, Fe-S subunit [Escherichia coli 55989] gi|218362036|emb|CAQ99643.1| hydrogenase 3, Fe-S subunit [Escherichia coli IAI1] gi|254594064|gb|ACT73425.1| hydrogenase 3, Fe-S subunit [Escherichia coli O157:H7 str. TW14359] gi|257760514|dbj|BAI32011.1| hydrogenase 3, Fe-S subunit [Escherichia coli O103:H2 str. 12009] gi|290763924|gb|ADD57885.1| Formate hydrogenlyase, subunit B [Escherichia coli O55:H7 str. CB9615] gi|300421372|gb|EFK04683.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300526763|gb|EFK47832.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300531801|gb|EFK52863.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300847086|gb|EFK74846.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|306907288|gb|EFN37794.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|308121155|gb|EFO58417.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|315062000|gb|ADT76327.1| hydrogenase 3, Fe-S subunit [Escherichia coli W] gi|320189056|gb|EFW63715.1| Formate hydrogenlyase subunit 2 [Escherichia coli O157:H7 str. EC1212] gi|320202374|gb|EFW76944.1| Formate hydrogenlyase subunit 2 [Escherichia coli EC4100B] gi|320640367|gb|EFX09906.1| Formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. G5101] gi|320645914|gb|EFX14895.1| Formate hydrogenlyase, subunit B [Escherichia coli O157:H- str. 493-89] gi|320651214|gb|EFX19649.1| Formate hydrogenlyase, subunit B [Escherichia coli O157:H- str. H 2687] gi|320656764|gb|EFX24652.1| Formate hydrogenlyase, subunit B [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662307|gb|EFX29704.1| Formate hydrogenlyase, subunit B [Escherichia coli O55:H7 str. USDA 5905] gi|320667358|gb|EFX34316.1| Formate hydrogenlyase, subunit B [Escherichia coli O157:H7 str. LSU-61] gi|323159848|gb|EFZ45819.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323377417|gb|ADX49685.1| small subunit of hydrogenase-3, iron-sulfur protein [Escherichia coli KO11] gi|323946395|gb|EGB42423.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324017037|gb|EGB86256.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] gi|326339204|gb|EGD63019.1| Formate hydrogenlyase subunit 2 [Escherichia coli O157:H7 str. 1044] gi|326342913|gb|EGD66681.1| Formate hydrogenlyase subunit 2 [Escherichia coli O157:H7 str. 1125] gi|331047583|gb|EGI19660.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli M718] gi|331063125|gb|EGI35038.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli TA271] gi|331073528|gb|EGI44849.1| formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3component B) [Escherichia coli H591] Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|319789069|ref|YP_004150702.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermovibrio ammonificans HB-1] gi|317113571|gb|ADU96061.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermovibrio ammonificans HB-1] Length = 58 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + E CI C C VCP +C + ++ I ++CIDCG C CP +AI + Sbjct: 1 MAHKIDPELCIGCG--ACASVCPTNCIHPTDDGKYEIVAEDCIDCGACVEVCPTNAISQE 58 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 15/30 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I P+ CI CG C CP + I P + E Sbjct: 5 IDPELCIGCGACASVCPTNCIHPTDDGKYE 34 >gi|312137470|ref|YP_004004807.1| nil domain protein [Methanothermus fervidus DSM 2088] gi|311225189|gb|ADP78045.1| NIL domain protein [Methanothermus fervidus DSM 2088] Length = 134 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E CI C CV +CPV +++ I ++C+ CG C CP+ A+ Sbjct: 77 EKCIDCG--ACVSICPVGAISIKDDWTVEIDDEKCVGCGCCVITCPMKAV 124 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 ++CIDCG C CPV AI + Sbjct: 75 DKEKCIDCGACVSICPVGAISIKDD 99 >gi|307719238|ref|YP_003874770.1| iron-sulfur cluster-binding protein [Spirochaeta thermophila DSM 6192] gi|306532963|gb|ADN02497.1| iron-sulfur cluster-binding protein [Spirochaeta thermophila DSM 6192] Length = 371 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ + C C + C VCPV C + CI C C CP +AI+ L Sbjct: 306 VIEDRCRRCGY--CARVCPVSCITM-DGLPVWDYSRCIYCYCCHENCPHEAIELKEPLLL 362 Query: 64 ELWLK 68 L+ Sbjct: 363 RLYRA 367 >gi|291612995|ref|YP_003523152.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] gi|291583107|gb|ADE10765.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] Length = 431 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 C+ C+ CP + I+P CI GVC P CP +AIK Sbjct: 58 CMG--AGSCITACPEGAIGMIKGKAVLINPTHCIGHGVCAPACPHNAIK 104 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I+P+ C+ G C CP AI Sbjct: 52 EINPNLCMGAGSCITACPEGAI 73 >gi|261402608|ref|YP_003246832.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261369601|gb|ACX72350.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 247 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C+E CPV+ + + + I+ ++CI CG C CP +AIK Sbjct: 197 CVGC--FVCIEECPVNAIDQDGDKVKINKEKCILCGRCVDVCPTNAIK 242 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ C+ C C + CPV+ + + N I D+C+ C +C CPV AI Sbjct: 38 YIDETKCVRCNL--CYKECPVNAIEKAKVKNPAKIIEDKCVKCEICAQTCPVGAIY 91 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E CI C C CP + + ++ D C+ CG CE CP IK + E G Sbjct: 128 EKCIKCG--ICARFCPTNAIKVVRRKSIEVNLDLCMGCGACESVCPKKCIKVENEIGD 183 Score = 37.4 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 28/79 (35%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGE------------------------NFLAIHP 37 ++ + C+ C+ C + CPV Y EGE + Sbjct: 70 IIEDKCVKCE--ICAQTCPVGAIYVIEGEAEVKDEEVHYLIKEKPVPHRKIRLKSYQLDE 127 Query: 38 DECIDCGVCEPECPVDAIK 56 ++CI CG+C CP +AIK Sbjct: 128 EKCIKCGICARFCPTNAIK 146 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + I +C+ C +C ECPV+AI+ Sbjct: 37 IYIDETKCVRCNLCYKECPVNAIE 60 >gi|157162347|ref|YP_001459665.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli HS] gi|188493748|ref|ZP_03001018.1| glutamate synthase, small subunit [Escherichia coli 53638] gi|253772273|ref|YP_003035104.1| oxidoreductase Fe-S binding subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162799|ref|YP_003045907.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli B str. REL606] gi|157068027|gb|ABV07282.1| protein aegA [Escherichia coli HS] gi|188488947|gb|EDU64050.1| glutamate synthase, small subunit [Escherichia coli 53638] gi|253323317|gb|ACT27919.1| glutamate synthase, small subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974700|gb|ACT40371.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli B str. REL606] gi|253978866|gb|ACT44536.1| fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit [Escherichia coli BL21(DE3)] gi|313848739|emb|CAQ33198.2| fused predicted oxidoreductase, Fe-S subunit and nucleotide-binding subunit [Escherichia coli BL21(DE3)] gi|323971676|gb|EGB66905.1| glutamate synthase [Escherichia coli TA007] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|119496461|ref|XP_001265004.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Neosartorya fischeri NRRL 181] gi|119413166|gb|EAW23107.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Neosartorya fischeri NRRL 181] Length = 228 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 127 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 184 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 + N+EYAT+ + K++ L + K + Sbjct: 185 ETS----------NAEYATETREELLYNKEKLLANGDKWE 214 >gi|74318034|ref|YP_315774.1| electron transport complex protein RnfB [Thiobacillus denitrificans ATCC 25259] gi|123731760|sp|Q3SHB7|RNFB_THIDA RecName: Full=Electron transport complex protein rnfB gi|74057529|gb|AAZ97969.1| Electron transport complex, RnfABCDGE type, B subunit [Thiobacillus denitrificans ATCC 25259] Length = 188 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I DEC C +C CPVD I Sbjct: 106 AFIDEQTCIGC--TLCIQACPVDAISGAAKQMHTIIADECTGCELCLAPCPVDCI 158 >gi|15837149|ref|NP_297837.1| ferredoxin [Xylella fastidiosa 9a5c] gi|9105406|gb|AAF83357.1|AE003902_2 ferredoxin II [Xylella fastidiosa 9a5c] Length = 159 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 102 AWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 155 >gi|20092114|ref|NP_618189.1| hypothetical protein MA3299 [Methanosarcina acetivorans C2A] gi|19917334|gb|AAM06669.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 438 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 25/48 (52%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E CI CK E CP+ +GEN +P+ C +CG+C C +A Sbjct: 331 EKCIDCKICCVAEACPMGAVSKGENGAVHNPELCFNCGLCISRCKGEA 378 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 2/21 (9%) Query: 37 PDECIDCGVC--EPECPVDAI 55 P++CIDC +C CP+ A+ Sbjct: 330 PEKCIDCKICCVAEACPMGAV 350 >gi|89894735|ref|YP_518222.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89334183|dbj|BAE83778.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 183 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDA 54 +C C C VCPV ++ + +H + CI C VC CP A Sbjct: 56 SCRHCSEPQCAAVCPVGAIKSTDDGVVLHNELLCIGCQVCAAVCPYAA 103 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 20/78 (25%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDE--------------CIDCG 44 M ++ + +CI CK C+ C + +N +L +HP E C C Sbjct: 4 MAMLIDSTSCIGCK--ACLAACKQENGLATDNNYLKMHPVEFLNDHYVRYYAHVSCRHCS 61 Query: 45 --VCEPECPVDAIKPDTE 60 C CPV AIK + Sbjct: 62 EPQCAAVCPVGAIKSTDD 79 >gi|333002249|gb|EGK21813.1| protein aegA [Shigella flexneri K-272] Length = 654 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|332879175|ref|ZP_08446873.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682833|gb|EGJ55732.1| 4Fe-4S binding domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 267 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ T +CI C C++VCP+ F + + L ++ + CI C +C CP D+I + Sbjct: 186 FLNTTSCIKCG--KCMKVCPMSIFQKSDVLLPMNEENCIQCQLCTKHCPTDSIYINESFT 243 Query: 63 LELWLKINSEYATQ 76 + + + ++++ Sbjct: 244 NGMRIALREMFSSK 257 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 G N + ++ CI CG C CP+ +I ++ Sbjct: 181 GGNVVFLNTTSCIKCGKCMKVCPM-SIFQKSD 211 >gi|296133322|ref|YP_003640569.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031900|gb|ADG82668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 272 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C C +VCP + + E + + ++CI CG C CP Sbjct: 74 CMHCTEAACEKVCPENAIFHTAEGAVVVDREKCIGCGYCAQYCPFG 119 >gi|238784601|ref|ZP_04628607.1| Hydrogenase-2 operon protein hybA [Yersinia bercovieri ATCC 43970] gi|238714470|gb|EEQ06476.1| Hydrogenase-2 operon protein hybA [Yersinia bercovieri ATCC 43970] Length = 300 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + C+ C +CV VCPV + + P+ C C C CP + K D + Sbjct: 61 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPNVCTGCRYCMVGCPFNVPKYDYDNP 120 Query: 63 LEL 65 Sbjct: 121 FGQ 123 >gi|256822167|ref|YP_003146130.1| RnfABCDGE type electron transport complex subunit B [Kangiella koreensis DSM 16069] gi|256795706|gb|ACV26362.1| electron transport complex, RnfABCDGE type, B subunit [Kangiella koreensis DSM 16069] Length = 195 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD I DEC C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGAPKLMHTVII-DECTGCDLCVEPCPVDCI 159 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 104 PRVAYIREDECIGCTKCIQACPVDAI 129 >gi|237730591|ref|ZP_04561072.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906130|gb|EEH92048.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 185 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTE 60 C C++ C+ CPV+ + + E+ + +H P+ CI C C CP A + + E Sbjct: 56 ACNHCENPACLAACPVEAYTKREDGVVVHNPERCIGCKNCIRNCPYGAPRFNEE 109 >gi|254462867|ref|ZP_05076283.1| 4Fe-4S binding domain protein [Rhodobacterales bacterium HTCC2083] gi|206679456|gb|EDZ43943.1| 4Fe-4S binding domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 257 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEQDCIGCGLCAWACPYGAREMD 133 >gi|220929708|ref|YP_002506617.1| PAS/PAC sensor protein [Clostridium cellulolyticum H10] gi|220000036|gb|ACL76637.1| putative PAS/PAC sensor protein [Clostridium cellulolyticum H10] Length = 574 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV+ + I DEC+ CG C CP +A Sbjct: 10 NCKNC--YKCIRSCPVNAIAFKNDQAEIIHDECMLCGNCLTVCPQNA 54 >gi|26248837|ref|NP_754877.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli CFT073] gi|227887504|ref|ZP_04005309.1| Fe-S center and glutamate synthase (GltD) protein [Escherichia coli 83972] gi|26109243|gb|AAN81445.1|AE016764_127 AegA protein [Escherichia coli CFT073] gi|227835854|gb|EEJ46320.1| Fe-S center and glutamate synthase (GltD) protein [Escherichia coli 83972] gi|307554498|gb|ADN47273.1| putative oxidoreductase [Escherichia coli ABU 83972] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|21230794|ref|NP_636711.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769208|ref|YP_243970.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|188992355|ref|YP_001904365.1| ferredoxin [Xanthomonas campestris pv. campestris str. B100] gi|21112394|gb|AAM40635.1| ferredoxin II [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574540|gb|AAY49950.1| ferredoxin II [Xanthomonas campestris pv. campestris str. 8004] gi|167734115|emb|CAP52321.1| Putative ferredoxin [Xanthomonas campestris pv. campestris] Length = 139 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 81 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCVPACPVDCIE 134 >gi|11498801|ref|NP_070030.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|2649382|gb|AAB90042.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 165 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C CV+ CP + E+ + D CI C +C CP A + + + ++ Sbjct: 64 CRHCLSAPCVDECPTGALRKSEDGMTVLDLDLCIGCKICMEVCPFGAPQLGDDGKVRIY 122 Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDEC---IDCG---VCEPECPVDA 54 MT + + CI CK C+EVCP G++ D C I+ G C C Sbjct: 88 MTVLDLDLCIGCK--ICMEVCPFGAPQLGDDGKVRIYDLCMPRIEEGKKPACVSACVAQC 145 Query: 55 IKPDTEPGLEL 65 ++ + L+ Sbjct: 146 LQVKSVEDLKK 156 >gi|113972005|ref|YP_735798.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|114045777|ref|YP_736327.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113886689|gb|ABI40741.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] gi|113887219|gb|ABI41270.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 219 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + C C CV+ CP + +N L + CI CG C CP DA + DT Sbjct: 76 AYYTSIGCNHCSEPVCVKACPTGAMHKRKDNGLVLVESSICIGCGSCARACPYDAPQLDT 135 Query: 60 E 60 + Sbjct: 136 Q 136 >gi|191172939|ref|ZP_03034474.1| protein aegA [Escherichia coli F11] gi|190906803|gb|EDV66407.1| protein aegA [Escherichia coli F11] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|116624728|ref|YP_826884.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227890|gb|ABJ86599.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 247 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 ++ V + C C + CV+VCPV + + + + D C+ C C CP Sbjct: 113 SFFVPKLCNHCVDSPCVQVCPVGATFVSPDGVVLVDKDYCLGCRYCVQACPYGC 166 >gi|107023739|ref|YP_622066.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia AU 1054] gi|116690826|ref|YP_836449.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia HI2424] gi|170734151|ref|YP_001766098.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia cenocepacia MC0-3] gi|254247173|ref|ZP_04940494.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|105893928|gb|ABF77093.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia cenocepacia AU 1054] gi|116648915|gb|ABK09556.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia cenocepacia HI2424] gi|124871949|gb|EAY63665.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia cenocepacia PC184] gi|169817393|gb|ACA91976.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia cenocepacia MC0-3] Length = 88 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|46201601|ref|ZP_00208165.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 222 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C C+EVCP + + L I D CI CG C CP +A + Sbjct: 58 CQHCDEPPCMEVCPSTATGKRADGLVTIDYDICIGCGYCAISCPYEARYKVDKADF 113 >gi|295115164|emb|CBL36011.1| Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [butyrate-producing bacterium SM4/1] Length = 209 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y VT+ CI CK C CP C + +AI + C+ CG C CP A++ Sbjct: 153 YFVTDKCIGCKL--CYSKCPQKCIDITQKPVAIEQEHCLHCGNCFEICPAGAVE 204 >gi|269139048|ref|YP_003295749.1| electron transport complex protein [Edwardsiella tarda EIB202] gi|267984709|gb|ACY84538.1| electron transport complex protein [Edwardsiella tarda EIB202] gi|304558980|gb|ADM41644.1| Electron transport complex protein RnfB [Edwardsiella tarda FL6-60] Length = 191 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD L + D+C CG+C P CP I+ Sbjct: 115 NCIGC--TKCIQSCPVDAIVGATRALHTVISDQCTGCGLCLPPCPTSCIQ 162 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 111 IDEANCIGCTKCIQSCPVDAI 131 >gi|258655376|ref|YP_003204532.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nakamurella multipartita DSM 44233] gi|258558601|gb|ACV81543.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nakamurella multipartita DSM 44233] Length = 332 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C H C++VCP + E + I D C CG C CP ++ + Sbjct: 126 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVIQADVCNGCGTCVAGCPFGVVERRDD 181 >gi|222034187|emb|CAP76928.1| Protein aegA [Escherichia coli LF82] gi|312947052|gb|ADR27879.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|213022400|ref|ZP_03336847.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 217 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|71735100|ref|YP_273634.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555653|gb|AAZ34864.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 280 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 74 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 127 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+ + C C CV CPVDC Sbjct: 103 MHTVIVDECTGCDL--CVAPCPVDCIEM 128 >gi|323960817|gb|EGB56438.1| glutamate synthase [Escherichia coli H489] Length = 639 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|307312542|ref|ZP_07592175.1| glutamate synthase, small subunit [Escherichia coli W] gi|306907465|gb|EFN37969.1| glutamate synthase, small subunit [Escherichia coli W] gi|315061783|gb|ADT76110.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli W] gi|323377636|gb|ADX49904.1| glutamate synthase, small subunit [Escherichia coli KO11] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|306814455|ref|ZP_07448617.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli NC101] gi|305851849|gb|EFM52301.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli NC101] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|269966518|ref|ZP_06180601.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 40B] gi|269828862|gb|EEZ83113.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 40B] Length = 255 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|218696094|ref|YP_002403761.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli 55989] gi|218352826|emb|CAU98614.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli 55989] gi|324118191|gb|EGC12088.1| glutamate synthase [Escherichia coli E1167] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|110642640|ref|YP_670370.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli 536] gi|215487769|ref|YP_002330200.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|218690594|ref|YP_002398806.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli ED1a] gi|110344232|gb|ABG70469.1| AegA protein [Escherichia coli 536] gi|215265841|emb|CAS10250.1| fused predicted oxidoreductase: FeS binding subunit /NAD/FAD-binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|218428158|emb|CAR09073.2| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli ED1a] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|82777844|ref|YP_404193.1| putative oxidoreductase Fe-S binding subunit [Shigella dysenteriae Sd197] gi|81241992|gb|ABB62702.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|57640966|ref|YP_183444.1| putative ATPase RIL [Thermococcus kodakarensis KOD1] gi|57159290|dbj|BAD85220.1| predicted ATPase, RNase L inhibitor homolog [Thermococcus kodakarensis KOD1] Length = 594 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 18/92 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 10 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 67 Query: 56 K-----PDTEPGLELWLKINSEYATQWPNITT 82 + E G IN+ + P + Sbjct: 68 TIVNLPEELEEGCVHRYGINAFVLYRLPVVKE 99 >gi|15679840|ref|NP_276958.1| indolepyruvate oxidoreductase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|6685555|sp|O27880|IORA_METTH RecName: Full=Indolepyruvate oxidoreductase subunit iorA; Short=IOR; AltName: Full=Indolepyruvate ferredoxin oxidoreductase subunit alpha gi|2622988|gb|AAB86318.1| indolepyruvate oxidoreductase, alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 618 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Query: 1 MTYVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M V E C LC +C+ CP EGE + I P +C C VC CP AIKP+ Sbjct: 561 MA-VDGEKCDLCL--ECIRDLACPAMVTREGE--VFIDPLKCRGCSVCLQICPAGAIKPE 615 >gi|297526529|ref|YP_003668553.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Staphylothermus hellenicus DSM 12710] gi|297255445|gb|ADI31654.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Staphylothermus hellenicus DSM 12710] Length = 640 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 3 YVVTEN-CILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y + ++ C C CV + CP +G I P+ C CG+C CP +AI Sbjct: 572 YTILQDKCTGC--MVCVNLLGCPAIVVPKGSKKPVILPELCAGCGLCAQVCPFNAIV-LK 628 Query: 60 EPGLELWLK 68 E G WL+ Sbjct: 629 EKGSPNWLE 637 >gi|293410861|ref|ZP_06654437.1| conserved hypothetical protein [Escherichia coli B354] gi|291471329|gb|EFF13813.1| conserved hypothetical protein [Escherichia coli B354] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|270158204|ref|ZP_06186861.1| electron transport complex family protein [Legionella longbeachae D-4968] gi|289163539|ref|YP_003453677.1| Electron transport complex protein [Legionella longbeachae NSW150] gi|269990229|gb|EEZ96483.1| electron transport complex family protein [Legionella longbeachae D-4968] gi|288856712|emb|CBJ10523.1| Electron transport complex protein [Legionella longbeachae NSW150] Length = 204 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 7/95 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C T C++ CPVD G+ A+ EC CG+C CPVD I+ Sbjct: 83 ECIGC--TKCIKACPVDAIIGSGKLMHAVMTHECTGCGLCVAPCPVDCIEMVESSAA--- 137 Query: 67 LKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + + + A + + K ++K + Sbjct: 138 -EYDKDLARIRFHAKQSRLLREDHEKQQAYREKRQ 171 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I ECI C C CPVDAI Sbjct: 78 VIREAECIGCTKCIKACPVDAI 99 >gi|254976914|ref|ZP_05273386.1| electron transport protein [Clostridium difficile QCD-66c26] gi|255094300|ref|ZP_05323778.1| electron transport protein [Clostridium difficile CIP 107932] gi|255102482|ref|ZP_05331459.1| electron transport protein [Clostridium difficile QCD-63q42] gi|255308387|ref|ZP_05352558.1| electron transport protein [Clostridium difficile ATCC 43255] gi|255316054|ref|ZP_05357637.1| electron transport protein [Clostridium difficile QCD-76w55] gi|255518711|ref|ZP_05386387.1| electron transport protein [Clostridium difficile QCD-97b34] gi|255651833|ref|ZP_05398735.1| electron transport protein [Clostridium difficile QCD-37x79] gi|260684859|ref|YP_003216144.1| electron transport protein [Clostridium difficile CD196] gi|260688517|ref|YP_003219651.1| electron transport protein [Clostridium difficile R20291] gi|306521620|ref|ZP_07407967.1| electron transport protein [Clostridium difficile QCD-32g58] gi|260211022|emb|CBA66342.1| electron transport protein [Clostridium difficile CD196] gi|260214534|emb|CBE07057.1| electron transport protein [Clostridium difficile R20291] Length = 183 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C+ CP + N ++++ ++CI C C CP AI Sbjct: 65 CRHCEDAPCLNSCPQKAIVKENNIMSVNEEKCIGCKTCLLACPFGAI 111 >gi|89895375|ref|YP_518862.1| iron-sulfur protein [Desulfitobacterium hafniense Y51] gi|89334823|dbj|BAE84418.1| iron-sulfur protein [Desulfitobacterium hafniense Y51] Length = 162 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 27/52 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ CV+VCP Y+ E + ++ + CI C +C CP +I TE Sbjct: 63 CRQCEDAPCVKVCPNGSLYQEEGLVKLNRETCIGCKLCARACPFGSITMTTE 114 >gi|809680|emb|CAA35547.1| hycB [Escherichia coli] gi|1093495|prf||2104213B hycB gene Length = 203 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|114321574|ref|YP_743257.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227968|gb|ABI57767.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 248 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDC---FYEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C+ CV VCP E + I D CI C C CP Sbjct: 57 PCMQCEDATCVTVCPTGATYKDAEAGGVVFIDWDRCIGCKYCIVACPYG 105 >gi|16130393|ref|NP_416963.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109273|ref|AP_003053.1| fused predicted FeS binding subunit and predicted NAD/FAD-binding subunit of oxidoreductase [Escherichia coli str. K-12 substr. W3110] gi|157161927|ref|YP_001459245.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli HS] gi|170019248|ref|YP_001724202.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli ATCC 8739] gi|170082077|ref|YP_001731397.1| fused oxidoreductase: FeS binding subunit; NAD/FAD-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|188496164|ref|ZP_03003434.1| protein aegA [Escherichia coli 53638] gi|194437640|ref|ZP_03069736.1| protein aegA [Escherichia coli 101-1] gi|238901631|ref|YP_002927427.1| fused putative oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli BW2952] gi|253772641|ref|YP_003035472.1| oxidoreductase Fe-S binding subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162442|ref|YP_003045550.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli B str. REL606] gi|256021847|ref|ZP_05435712.1| putative oxidoreductase Fe-S binding subunit [Escherichia sp. 4_1_40B] gi|307139101|ref|ZP_07498457.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli H736] gi|331643082|ref|ZP_08344217.1| protein AegA [Escherichia coli H736] gi|2506464|sp|P37127|AEGA_ECOLI RecName: Full=Protein AegA gi|1788811|gb|AAC75521.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli str. K-12 substr. MG1655] gi|85675416|dbj|BAA16342.2| fused predicted FeS binding subunit and predicted NAD/FAD-binding subunit of oxidoreductase [Escherichia coli str. K12 substr. W3110] gi|157067607|gb|ABV06862.1| protein aegA [Escherichia coli HS] gi|169754176|gb|ACA76875.1| glutamate synthase, small subunit [Escherichia coli ATCC 8739] gi|169889912|gb|ACB03619.1| fused predicted oxidoreductase: FeS binding subunit; NAD/FAD-binding subunit [Escherichia coli str. K-12 substr. DH10B] gi|188491363|gb|EDU66466.1| protein aegA [Escherichia coli 53638] gi|194423446|gb|EDX39437.1| protein aegA [Escherichia coli 101-1] gi|238861231|gb|ACR63229.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli BW2952] gi|242378067|emb|CAQ32838.1| putative oxidoreductase, Fe-S subunit [Escherichia coli BL21(DE3)] gi|253323685|gb|ACT28287.1| glutamate synthase, small subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974343|gb|ACT40014.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli B str. REL606] gi|253978510|gb|ACT44180.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli BL21(DE3)] gi|260448454|gb|ACX38876.1| glutamate synthase, small subunit [Escherichia coli DH1] gi|309702747|emb|CBJ02076.1| oxidoreductase [Escherichia coli ETEC H10407] gi|315137090|dbj|BAJ44249.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli DH1] gi|315615710|gb|EFU96342.1| protein aegA [Escherichia coli 3431] gi|323941277|gb|EGB37462.1| glutamate synthase [Escherichia coli E482] gi|323961260|gb|EGB56872.1| glutamate synthase [Escherichia coli H489] gi|323971014|gb|EGB66263.1| glutamate synthase [Escherichia coli TA007] gi|331039880|gb|EGI12100.1| protein AegA [Escherichia coli H736] gi|332344286|gb|AEE57620.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 659 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|328474655|gb|EGF45460.1| tetrathionate reductase subunit B [Vibrio parahaemolyticus 10329] Length = 255 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|309776013|ref|ZP_07671005.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916295|gb|EFP62043.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 3_1_53] Length = 202 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + + + C+ C C+ CP C G+ ++ + + C+ CG+C CPV AI Sbjct: 149 FQILDACVQCG--SCLRSCPQQCIETGQPYIIVQKN-CLHCGLCAEVCPVHAI 198 >gi|304314083|ref|YP_003849230.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] gi|302587542|gb|ADL57917.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] Length = 143 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 9 CILC--KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C + C+ +CP D E + + I D+CI CG+C CP+ AI Sbjct: 36 CMHCAPERAPCLNICPEDAIVEVDGAVVILEDKCIGCGLCRDACPIGAI 84 >gi|260901541|ref|ZP_05909936.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ4037] gi|308110900|gb|EFO48440.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ4037] Length = 255 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|225024698|ref|ZP_03713890.1| hypothetical protein EIKCOROL_01580 [Eikenella corrodens ATCC 23834] gi|224942537|gb|EEG23746.1| hypothetical protein EIKCOROL_01580 [Eikenella corrodens ATCC 23834] Length = 85 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I PD C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEIDPDLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGL 63 I D E Sbjct: 59 ILIDEEHPE 67 >gi|15832635|ref|NP_311408.1| polyferredoxin [Escherichia coli O157:H7 str. Sakai] gi|168748422|ref|ZP_02773444.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4113] gi|168756291|ref|ZP_02781298.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4401] gi|168761129|ref|ZP_02786136.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4501] gi|168768611|ref|ZP_02793618.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4486] gi|168773567|ref|ZP_02798574.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4196] gi|168778485|ref|ZP_02803492.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4076] gi|168787865|ref|ZP_02812872.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC869] gi|168798890|ref|ZP_02823897.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC508] gi|195936661|ref|ZP_03082043.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4024] gi|208809392|ref|ZP_03251729.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4206] gi|208812703|ref|ZP_03254032.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4045] gi|208821200|ref|ZP_03261520.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4042] gi|209398407|ref|YP_002271989.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4115] gi|217327417|ref|ZP_03443500.1| putative polyferredoxin [Escherichia coli O157:H7 str. TW14588] gi|261223049|ref|ZP_05937330.1| putative polyferredoxin [Escherichia coli O157:H7 str. FRIK2000] gi|261259400|ref|ZP_05951933.1| putative polyferredoxin [Escherichia coli O157:H7 str. FRIK966] gi|13362851|dbj|BAB36804.1| putative polyferredoxin [Escherichia coli O157:H7 str. Sakai] gi|187770682|gb|EDU34526.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4196] gi|188017040|gb|EDU55162.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4113] gi|189003633|gb|EDU72619.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4076] gi|189356572|gb|EDU74991.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4401] gi|189362196|gb|EDU80615.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4486] gi|189368440|gb|EDU86856.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4501] gi|189372305|gb|EDU90721.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC869] gi|189378670|gb|EDU97086.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC508] gi|208729193|gb|EDZ78794.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4206] gi|208733980|gb|EDZ82667.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4045] gi|208741323|gb|EDZ89005.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4042] gi|209159807|gb|ACI37240.1| putative polyferredoxin [Escherichia coli O157:H7 str. EC4115] gi|217319784|gb|EEC28209.1| putative polyferredoxin [Escherichia coli O157:H7 str. TW14588] gi|320188852|gb|EFW63511.1| Putative polyferredoxin [Escherichia coli O157:H7 str. EC1212] gi|326340317|gb|EGD64121.1| Putative polyferredoxin [Escherichia coli O157:H7 str. 1125] gi|326345001|gb|EGD68745.1| Putative polyferredoxin [Escherichia coli O157:H7 str. 1044] Length = 284 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CIDC VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIR 64 >gi|15668758|ref|NP_247557.1| iron-sulfer cluster binding protein [Methanocaldococcus jannaschii DSM 2661] gi|2494450|sp|Q57998|Y578_METJA RecName: Full=Uncharacterized protein MJ0578 gi|1591285|gb|AAB98569.1| iron-sulfer cluster binding protein [Methanocaldococcus jannaschii DSM 2661] Length = 276 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + ++CI C C++VC D + I+P C CG CE C DAI+P Sbjct: 70 YEINDDCIRCG--KCLDVCQFDAIGD----FKINPILCEGCGACELICEFDAIEP 118 >gi|83950402|ref|ZP_00959135.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius nubinhibens ISM] gi|83838301|gb|EAP77597.1| formate dehydrogenase, iron-sulfur subunit, putative [Roseovarius nubinhibens ISM] Length = 134 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 18 VEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 + VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 1 MAVCPVDCFYQTEEGVVLHSKDLCIGCGYCFYACPFGAPQY 41 >gi|331658614|ref|ZP_08359558.1| protein AegA [Escherichia coli TA206] gi|331054279|gb|EGI26306.1| protein AegA [Escherichia coli TA206] Length = 659 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|300941100|ref|ZP_07155612.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300454143|gb|EFK17636.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 203 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|281179530|dbj|BAI55860.1| putative oxidoreductase [Escherichia coli SE15] Length = 659 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|239904886|ref|YP_002951624.1| NADH-quinone oxidoreductase chain F [Desulfovibrio magneticus RS-1] gi|239794749|dbj|BAH73738.1| NADH-quinone oxidoreductase chain F [Desulfovibrio magneticus RS-1] Length = 490 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +TY + C C T C +VCPV+C + I +CI CG C +C D+I Sbjct: 433 LTYTINPAKCTGC--TLCTKVCPVECISGTKKQPHVIDASKCIKCGACYDKCKFDSI 487 >gi|153837801|ref|ZP_01990468.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ3810] gi|149748822|gb|EDM59661.1| tetrathionate reductase, subunit B [Vibrio parahaemolyticus AQ3810] Length = 255 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|219667563|ref|YP_002457998.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537823|gb|ACL19562.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 182 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C C +VCP Y+ E+ + I +CI C C CP +A Sbjct: 58 CQHCDDAPCQKVCPTGATYKREDGIVLIDAQKCIGCKYCMVACPYNA 104 >gi|193068445|ref|ZP_03049408.1| protein aegA [Escherichia coli E110019] gi|260869155|ref|YP_003235557.1| fused putative oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O111:H- str. 11128] gi|293446820|ref|ZP_06663242.1| oxidoreductase Fe-S binding subunit [Escherichia coli B088] gi|331669202|ref|ZP_08370050.1| protein AegA [Escherichia coli TA271] gi|331678448|ref|ZP_08379123.1| protein AegA [Escherichia coli H591] gi|192958397|gb|EDV88837.1| protein aegA [Escherichia coli E110019] gi|257765511|dbj|BAI37006.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O111:H- str. 11128] gi|291323650|gb|EFE63078.1| oxidoreductase Fe-S binding subunit [Escherichia coli B088] gi|323177415|gb|EFZ63003.1| protein aegA [Escherichia coli 1180] gi|331064396|gb|EGI36307.1| protein AegA [Escherichia coli TA271] gi|331074908|gb|EGI46228.1| protein AegA [Escherichia coli H591] Length = 659 Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|327401016|ref|YP_004341855.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Archaeoglobus veneficus SNP6] gi|327316524|gb|AEA47140.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Archaeoglobus veneficus SNP6] Length = 621 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + VT++C LC CP Y I CI CGVC CP AIKP Sbjct: 566 PFTVTDDCNLCMKCVTEFACP--ALYVINGKPVIDAALCIACGVCSRICPEKAIKP 619 >gi|323703081|ref|ZP_08114736.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] gi|323531975|gb|EGB21859.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] Length = 645 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C + C V E + I +CI CG C+ CP +AI Sbjct: 575 CISCG--ICAKACGVGAISGEKKKPFYIDRQKCIKCGACQARCPKEAIF 621 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP E +F + P +CI CG+C C V AI + + Sbjct: 557 CPAGVCRELTDF-VVDPAKCISCGICAKACGVGAISGEKKKPF 598 >gi|318058600|ref|ZP_07977323.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. SA3_actG] gi|318080109|ref|ZP_07987441.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces sp. SA3_actF] Length = 315 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 126 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIEQ 178 >gi|301061344|ref|ZP_07202126.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2] gi|300444663|gb|EFK08646.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2] Length = 299 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE----------NFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C G + I+ CI CG+CE CP AI+ Sbjct: 64 ERCVACYL--CAAACPVSCISMGGAEREDGRRWATWFRINFARCIYCGLCEEACPTLAIQ 121 >gi|256017391|ref|ZP_05431256.1| putative oxidoreductase Fe-S binding subunit [Shigella sp. D9] gi|332278390|ref|ZP_08390803.1| FeS binding subunit/NAD/FAD-binding subunit [Shigella sp. D9] gi|332100742|gb|EGJ04088.1| FeS binding subunit/NAD/FAD-binding subunit [Shigella sp. D9] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|73541017|ref|YP_295537.1| benzoyl-CoA oxygenase, component A [Ralstonia eutropha JMP134] gi|72118430|gb|AAZ60693.1| benzoyl-CoA oxygenase, component A [Ralstonia eutropha JMP134] Length = 417 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C + CP+D E + D C C C CP AI Sbjct: 15 EICIRCN--TCEDTCPIDAITHDERNYVVKADVCNACNACLSPCPTGAI 61 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP+DAI D Sbjct: 12 IDPEICIRCNTCEDTCPIDAITHDER 37 >gi|11499084|ref|NP_070318.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA) [Archaeoglobus fulgidus DSM 4304] gi|6685558|sp|O28783|IORA_ARCFU RecName: Full=Indolepyruvate oxidoreductase subunit iorA; Short=IOR; AltName: Full=Indolepyruvate ferredoxin oxidoreductase subunit alpha gi|2649079|gb|AAB89760.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA) [Archaeoglobus fulgidus DSM 4304] Length = 623 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 2 TYVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 TY VTE+C LC +CV CP ++I C+ C VC CP AIKP Sbjct: 566 TYKVTEDCTLC--MECVNTFACP--ALIFDGEKVSIDQSLCVGCAVCAKICPNRAIKP 619 >gi|320581229|gb|EFW95450.1| NADH-quinone oxidoreductase chain I [Pichia angusta DL-1] Length = 212 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEERADGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 167 Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEERAD 137 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 152 CIYCGY--CQESCPVDAIVETPNIEY 175 >gi|296273536|ref|YP_003656167.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296097710|gb|ADG93660.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 268 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 + C C++ CV VCP F + + + + C CG C CP D Sbjct: 105 QLCNHCENPACVPVCPTGATFKREDGIVVVDNEICWGCGYCISACPYD 152 >gi|213418789|ref|ZP_03351855.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 116 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A + + Sbjct: 27 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGAPQLNE 86 Query: 60 EPGL 63 + G Sbjct: 87 QTGQ 90 >gi|187733026|ref|YP_001880432.1| iron-sulfur cluster-binding protein [Shigella boydii CDC 3083-94] gi|187430018|gb|ACD09292.1| iron-sulfur cluster-binding protein [Shigella boydii CDC 3083-94] Length = 239 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E L + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGLVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|78042641|ref|YP_359458.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77994756|gb|ABB13655.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 203 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C+ C + C+ VCPV + + + I +CI C +C CP A Sbjct: 69 IPMPCMHCDNAPCIAVCPVKASYKRKDGIVVIDKYKCIGCRLCLKACPYQA 119 >gi|326796922|ref|YP_004314742.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] gi|326547686|gb|ADZ92906.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Marinomonas mediterranea MMB-1] Length = 83 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP + +GE I P +C +C C CPVD Sbjct: 1 MSLIITDECINCDV--CEPECPNEAISQGEEIYVIDPAKCTECVGHYDEPQCVQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITT 82 I P + +++ E ++ +T Sbjct: 59 I-----PKDKDYVETEEELMEKYLVLTG 81 >gi|323188233|gb|EFZ73526.1| protein aegA [Escherichia coli RN587/1] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|331648121|ref|ZP_08349211.1| protein AegA [Escherichia coli M605] gi|331042981|gb|EGI15121.1| protein AegA [Escherichia coli M605] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|261253562|ref|ZP_05946135.1| electron transport complex protein RnfB [Vibrio orientalis CIP 102891] gi|260936953|gb|EEX92942.1| electron transport complex protein RnfB [Vibrio orientalis CIP 102891] Length = 194 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|302517468|ref|ZP_07269810.1| formate dehydrogenase, beta subunit [Streptomyces sp. SPB78] gi|302426363|gb|EFK98178.1| formate dehydrogenase, beta subunit [Streptomyces sp. SPB78] Length = 315 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 126 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQQDICNGCGYCVSACPYGVIEQ 178 >gi|150389143|ref|YP_001319192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949005|gb|ABR47533.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 177 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKP 57 Y V+ +C C+ CVE CPV +G++ + ++CI C C CP A K Sbjct: 43 YHVSMSCNHCEIPVCVENCPVGAMNKGKDNGVVDIVKEKCIGCQRCVKTCPYGAPKY 99 >gi|323169096|gb|EFZ54773.1| protein aegA [Shigella sonnei 53G] Length = 654 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|320657144|gb|EFX24953.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|319902323|ref|YP_004162051.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides helcogenes P 36-108] gi|319417354|gb|ADV44465.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides helcogenes P 36-108] Length = 320 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP D I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQDTI 265 Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVAACQFGAIHMNPETGLPEVDEAKCTACGACAKACPKNIIE 189 >gi|317489694|ref|ZP_07948198.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|316911288|gb|EFV32893.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] Length = 216 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 60 SYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 >gi|331673924|ref|ZP_08374687.1| protein AegA [Escherichia coli TA280] gi|331069197|gb|EGI40589.1| protein AegA [Escherichia coli TA280] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|331664022|ref|ZP_08364932.1| protein AegA [Escherichia coli TA143] gi|331059821|gb|EGI31798.1| protein AegA [Escherichia coli TA143] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|307250591|ref|ZP_07532533.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857407|gb|EFM89521.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 345 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV CPV E + PD C C C CP + K D Sbjct: 108 IKKQCMHCVEPNCVTACPVQALTKDEKTGIVNYDPDICTGCRYCMVACPFNVPKYD 163 >gi|295112090|emb|CBL28840.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Synergistetes bacterium SGP1] Length = 628 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C C T C CPV I +CI CG C CP AI+ Sbjct: 579 CRGC--TKCARSCPVGAISGVVKAPHLIDDGKCIRCGACMENCPFGAIRE 626 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I +C C C CPV AI Sbjct: 561 CPAK-VCQKMKRFEIDAAQCRGCTKCARSCPVGAI 594 >gi|260845099|ref|YP_003222877.1| fused putative oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O103:H2 str. 12009] gi|257760246|dbj|BAI31743.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O103:H2 str. 12009] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|224588326|gb|ACN58950.1| iron-sulfur cluster-binding protein [uncultured bacterium BLR10] Length = 245 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--KPD 58 Y+ CI C T C++ CPVD + + PD C C +C CPVD I P Sbjct: 80 AYIDESLCIGC--TLCIQACPVDAIIGAAKLMHTVVPDLCTGCDLCVNPCPVDCIVMHPV 137 Query: 59 TE-PGLELWLKINSEYATQ 76 TE G W + +++ A + Sbjct: 138 TETTGWNAWRQADADAARE 156 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 15/34 (44%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 PV+ I CI C +C CPVDAI Sbjct: 69 PVNGLERPRAVAYIDESLCIGCTLCIQACPVDAI 102 >gi|505330|gb|AAB46944.1| Fe-S center and glutamate synthase (GltD) protein [Escherichia coli] Length = 652 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|82544916|ref|YP_408863.1| oxidoreductase Fe-S binding subunit [Shigella boydii Sb227] gi|81246327|gb|ABB67035.1| putative oxidoreductase, Fe-S subunit [Shigella boydii Sb227] gi|323944683|gb|EGB40750.1| glutamate synthase [Escherichia coli H120] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|52424976|ref|YP_088113.1| electron transport complex protein RnfB [Mannheimia succiniciproducens MBEL55E] gi|52307028|gb|AAU37528.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 196 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD L + PD C C +C CP D IK Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIIGTNKSLHTVIPDLCTGCELCVAPCPTDCIK 159 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 13/27 (48%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 IH D CI C C CPVDAI Sbjct: 102 TPKVAFIHEDMCIGCTKCIQACPVDAI 128 >gi|157155091|ref|YP_001463790.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli E24377A] gi|191167628|ref|ZP_03029438.1| protein aegA [Escherichia coli B7A] gi|193064770|ref|ZP_03045848.1| protein aegA [Escherichia coli E22] gi|194427362|ref|ZP_03059912.1| protein aegA [Escherichia coli B171] gi|209919940|ref|YP_002294024.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli SE11] gi|218554991|ref|YP_002387904.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli IAI1] gi|157077121|gb|ABV16829.1| protein aegA [Escherichia coli E24377A] gi|190902308|gb|EDV62047.1| protein aegA [Escherichia coli B7A] gi|192927653|gb|EDV82269.1| protein aegA [Escherichia coli E22] gi|194414683|gb|EDX30955.1| protein aegA [Escherichia coli B171] gi|209913199|dbj|BAG78273.1| putative oxidoreductase [Escherichia coli SE11] gi|218361759|emb|CAQ99356.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli IAI1] gi|323159315|gb|EFZ45300.1| protein aegA [Escherichia coli E128010] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|323492347|ref|ZP_08097500.1| electron transport complex protein RnfB [Vibrio brasiliensis LMG 20546] gi|323313394|gb|EGA66505.1| electron transport complex protein RnfB [Vibrio brasiliensis LMG 20546] Length = 194 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|331684116|ref|ZP_08384712.1| protein AegA [Escherichia coli H299] gi|331079068|gb|EGI50270.1| protein AegA [Escherichia coli H299] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|304411591|ref|ZP_07393204.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307306633|ref|ZP_07586375.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|304350118|gb|EFM14523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306910601|gb|EFN41030.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] Length = 188 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + +IH ++C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPY 104 >gi|284922413|emb|CBG35500.1| oxidoreductase [Escherichia coli 042] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|282881566|ref|ZP_06290235.1| 4Fe-4S binding domain protein [Prevotella timonensis CRIS 5C-B1] gi|281304552|gb|EFA96643.1| 4Fe-4S binding domain protein [Prevotella timonensis CRIS 5C-B1] Length = 400 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-----AIHPDECIDCGVCEPECPV 52 C C C CP C E+ + I + CI+C CE CP+ Sbjct: 10 CTGCG--ACAYPCPKQCITMREDMIGQIYPVIDNNICIECHACEKICPI 56 >gi|269216153|ref|ZP_06160007.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] gi|269130412|gb|EEZ61490.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] Length = 190 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y V+ C C C+EVCP ++ L + CI CG C CP A D Sbjct: 40 AYHVSLACNHCDQPACMEVCPTGAMHKDGLGLVQVDHMRCIGCGYCTIACPYHAPSID 97 >gi|288931804|ref|YP_003435864.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894052|gb|ADC65589.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 251 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +Y V + C C CV+VCPV Y+ ++ + + CI C C CP A Sbjct: 110 SYFVPKLCNHCDRPPCVQVCPVGATYKTKDGVILVDEKYCIGCRYCIQACPYGA 163 >gi|218705966|ref|YP_002413485.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UMN026] gi|293405903|ref|ZP_06649895.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1412] gi|298381651|ref|ZP_06991250.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1302] gi|218433063|emb|CAR13958.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli UMN026] gi|291428111|gb|EFF01138.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1412] gi|298279093|gb|EFI20607.1| oxidoreductase Fe-S binding subunit [Escherichia coli FVEC1302] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|218700924|ref|YP_002408553.1| putative oxidoreductase [Escherichia coli IAI39] gi|218370910|emb|CAR18729.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli IAI39] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|170681460|ref|YP_001744650.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli SMS-3-5] gi|170519178|gb|ACB17356.1| protein aegA [Escherichia coli SMS-3-5] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|149190374|ref|ZP_01868646.1| electron transport complex protein RnfB [Vibrio shilonii AK1] gi|148835753|gb|EDL52718.1| electron transport complex protein RnfB [Vibrio shilonii AK1] Length = 193 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|13022069|gb|AAK11625.1|AF331719_1 [Fe] hydrogenase large subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 421 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 12/84 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E CI C C E CP + G H + CI+CG C CPV AI ++ Sbjct: 33 EKCIGCD--TCQEYCPTGAIFGDTGSAHSIPHEEICINCGQCLTHCPVGAIY-----EVQ 85 Query: 65 LWLKINSEYATQWPNITTKKESLP 88 W+ E + + + K ++P Sbjct: 86 SWV---RELSEKIKDPEIKVIAMP 106 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 17/28 (60%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 F+ I P++CI C C+ CP AI DT Sbjct: 27 FIQIDPEKCIGCDTCQEYCPTGAIFGDT 54 >gi|15802990|ref|NP_289020.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 EDL933] gi|15832584|ref|NP_311357.1| oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. Sakai] gi|168748482|ref|ZP_02773504.1| protein aegA [Escherichia coli O157:H7 str. EC4113] gi|168756232|ref|ZP_02781239.1| protein aegA [Escherichia coli O157:H7 str. EC4401] gi|168761069|ref|ZP_02786076.1| protein aegA [Escherichia coli O157:H7 str. EC4501] gi|168768552|ref|ZP_02793559.1| protein aegA [Escherichia coli O157:H7 str. EC4486] gi|168773627|ref|ZP_02798634.1| protein aegA [Escherichia coli O157:H7 str. EC4196] gi|168778426|ref|ZP_02803433.1| protein aegA [Escherichia coli O157:H7 str. EC4076] gi|168787806|ref|ZP_02812813.1| protein aegA [Escherichia coli O157:H7 str. EC869] gi|168798831|ref|ZP_02823838.1| protein aegA [Escherichia coli O157:H7 str. EC508] gi|195936609|ref|ZP_03081991.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. EC4024] gi|208806285|ref|ZP_03248622.1| protein aegA [Escherichia coli O157:H7 str. EC4206] gi|208813183|ref|ZP_03254512.1| protein aegA [Escherichia coli O157:H7 str. EC4045] gi|208819860|ref|ZP_03260180.1| protein aegA [Escherichia coli O157:H7 str. EC4042] gi|209396864|ref|YP_002271936.1| protein aegA [Escherichia coli O157:H7 str. EC4115] gi|217327657|ref|ZP_03443740.1| protein aegA [Escherichia coli O157:H7 str. TW14588] gi|254794412|ref|YP_003079249.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. TW14359] gi|261223100|ref|ZP_05937381.1| fused predicted oxidoreductase: FeS binding subunit, NAD [Escherichia coli O157:H7 str. FRIK2000] gi|261259348|ref|ZP_05951881.1| fused predicted oxidoreductase: FeS binding subunit, NAD [Escherichia coli O157:H7 str. FRIK966] gi|291283687|ref|YP_003500505.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. CB9615] gi|331653887|ref|ZP_08354888.1| protein AegA [Escherichia coli M718] gi|12516846|gb|AAG57577.1|AE005476_2 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13362800|dbj|BAB36753.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|187770732|gb|EDU34576.1| protein aegA [Escherichia coli O157:H7 str. EC4196] gi|188017016|gb|EDU55138.1| protein aegA [Escherichia coli O157:H7 str. EC4113] gi|189003194|gb|EDU72180.1| protein aegA [Escherichia coli O157:H7 str. EC4076] gi|189356550|gb|EDU74969.1| protein aegA [Escherichia coli O157:H7 str. EC4401] gi|189362302|gb|EDU80721.1| protein aegA [Escherichia coli O157:H7 str. EC4486] gi|189368496|gb|EDU86912.1| protein aegA [Escherichia coli O157:H7 str. EC4501] gi|189372387|gb|EDU90803.1| protein aegA [Escherichia coli O157:H7 str. EC869] gi|189378607|gb|EDU97023.1| protein aegA [Escherichia coli O157:H7 str. EC508] gi|208726086|gb|EDZ75687.1| protein aegA [Escherichia coli O157:H7 str. EC4206] gi|208734460|gb|EDZ83147.1| protein aegA [Escherichia coli O157:H7 str. EC4045] gi|208739983|gb|EDZ87665.1| protein aegA [Escherichia coli O157:H7 str. EC4042] gi|209158264|gb|ACI35697.1| protein aegA [Escherichia coli O157:H7 str. EC4115] gi|209763798|gb|ACI80211.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209763800|gb|ACI80212.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209763802|gb|ACI80213.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209763804|gb|ACI80214.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209763806|gb|ACI80215.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|217320024|gb|EEC28449.1| protein aegA [Escherichia coli O157:H7 str. TW14588] gi|254593812|gb|ACT73173.1| fused predicted oxidoreductase: FeS binding subunit, NAD [Escherichia coli O157:H7 str. TW14359] gi|290763560|gb|ADD57521.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. CB9615] gi|320188799|gb|EFW63458.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. EC1212] gi|320640971|gb|EFX10455.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. G5101] gi|320646253|gb|EFX15180.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H- str. 493-89] gi|320651759|gb|EFX20139.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H- str. H 2687] gi|320662903|gb|EFX30231.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320667790|gb|EFX34701.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. LSU-61] gi|326340262|gb|EGD64066.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. 1125] gi|326344947|gb|EGD68691.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. 1044] gi|331048736|gb|EGI20812.1| protein AegA [Escherichia coli M718] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|148260117|ref|YP_001234244.1| NADH-quinone oxidoreductase, chain I [Acidiphilium cryptum JF-5] gi|146401798|gb|ABQ30325.1| NADH dehydrogenase subunit I [Acidiphilium cryptum JF-5] Length = 170 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EG---ENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC EG F I+ CI CG CE CP AI+ Sbjct: 49 ERCVSCYL--CAVACPVDCISLQKTEAEGRWYPEFFRINFSRCIFCGFCEEACPTYAIQL 106 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESLP 88 + + + + N Y + I+ + Sbjct: 107 TPDFEMSEYDRQNLVYEKEHLLISGTGKYPD 137 >gi|150391071|ref|YP_001321120.1| indolepyruvate ferredoxin oxidoreductase [Alkaliphilus metalliredigens QYMF] gi|149950933|gb|ABR49461.1| Indolepyruvate ferredoxin oxidoreductase [Alkaliphilus metalliredigens QYMF] Length = 604 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCF--YEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 YV + CI C C+ CP YEG L +I D C+ C VC CPV+AIK Sbjct: 538 YVDPKICISC--RACIRTNCPPLRMIEYEGIEKLKSSIDKDMCVGCSVCAQVCPVNAIK 594 >gi|330446484|ref|ZP_08310136.1| electron transport complex, RnfABCDGE type, B subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490675|dbj|GAA04633.1| electron transport complex, RnfABCDGE type, B subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 194 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVSPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 + P W ++N Sbjct: 165 EETPDNWKW-QLNR 177 >gi|269967076|ref|ZP_06181144.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio alginolyticus 40B] gi|269828335|gb|EEZ82601.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio alginolyticus 40B] Length = 249 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 164 >gi|260856560|ref|YP_003230451.1| fused putative oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O26:H11 str. 11368] gi|257755209|dbj|BAI26711.1| fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit [Escherichia coli O26:H11 str. 11368] gi|323156067|gb|EFZ42226.1| protein aegA [Escherichia coli EPECa14] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|169247660|gb|ACA51660.1| HydB [Thermoanaerobacterium saccharolyticum] Length = 596 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + C C C + CP + I D+CI CG C +CP DAI Sbjct: 546 DKCKGCG--ICAKNCPTNAISGKVKQPHVIDQDKCIKCGTCMDKCPFDAIY 594 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I PD+C CG+C CP +AI Sbjct: 530 CPAG-VCQALLKFRIDPDKCKGCGICAKNCPTNAI 563 >gi|167761074|ref|ZP_02433201.1| hypothetical protein CLOSCI_03472 [Clostridium scindens ATCC 35704] gi|167661308|gb|EDS05438.1| hypothetical protein CLOSCI_03472 [Clostridium scindens ATCC 35704] Length = 606 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E CI C C CP G+ + I P++CI CG C C DA+ Sbjct: 544 EKCIGCD--MCARGCPASAISGGKKEIHAIDPEKCIACGSCREACKFDAV 591 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP E F AI P++CI C +C CP AI Sbjct: 528 CPAGVCKELTRF-AIQPEKCIGCDMCARGCPASAI 561 >gi|123442265|ref|YP_001006246.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089226|emb|CAL12072.1| putative iron-sulfur protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 207 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|78042697|ref|YP_360602.1| ferredoxin [Carboxydothermus hydrogenoformans Z-2901] gi|77994812|gb|ABB13711.1| ferredoxin [Carboxydothermus hydrogenoformans Z-2901] Length = 54 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +TE C+ C C++ CP + EG+ + D C +CG C CPV AI + Sbjct: 1 MAYRITEECLACG--TCMDSCPHNAIVEGD--IYKITDACQNCGTCAEACPVGAIVEE 54 >gi|83590042|ref|YP_430051.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572956|gb|ABC19508.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 1487 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 VV EN C C CV VCP + E N I+ +C+ CG C ECP AI+ Sbjct: 1415 VVDENKCAACL--TCVRVCPFNVPRINERNVAEINAVQCMGCGTCAGECPAKAIQ 1467 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN---ITT 82 E ++ I EC CG CE CPV +I + + I+ + PN IT Sbjct: 102 IREKPRYVNI--QECTACGDCEQACPV-SIPNEYNQEMGTRKAIHKMFPQAVPNKYLITK 158 Query: 83 KKESL 87 + Sbjct: 159 RGTPP 163 >gi|238799029|ref|ZP_04642489.1| Hydrogenase-2 operon protein hybA [Yersinia mollaretii ATCC 43969] gi|238717126|gb|EEQ08982.1| Hydrogenase-2 operon protein hybA [Yersinia mollaretii ATCC 43969] Length = 346 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + P+ C C C CP + K D + Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPNVCTGCRYCMVGCPFNVPKYDYD 170 >gi|93005191|ref|YP_579628.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] gi|92392869|gb|ABE74144.1| 4Fe-4S ferredoxin, iron-sulfur binding [Psychrobacter cryohalolentis K5] Length = 82 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + EG++ I PD C +C C CPVD Sbjct: 1 MALLITDECINCDV--CEPACPNEAISEGDDIYVIDPDLCTECVGHFDEPQCVVICPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPHD 62 >gi|319937834|ref|ZP_08012236.1| pyruvate formate-lyase 2-activating enzyme [Coprobacillus sp. 29_1] gi|319807064|gb|EFW03680.1| pyruvate formate-lyase 2-activating enzyme [Coprobacillus sp. 29_1] Length = 298 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI C CV VCP N + + +C+ C C CP DA+ + E Sbjct: 53 DKCIHC--QQCVHVCPHGALTHQNNRILVDAKKCVGCLTCVHACPQDALTHEGE 104 >gi|317154870|ref|YP_004122918.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316945121|gb|ADU64172.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 254 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 C+ C + CV CP Y+ + I CI CG C P CP A Sbjct: 61 ACMHCDNPTCVAACPTGATYKDPETGEVVIDDGLCIGCGNCIPACPYHA 109 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + I +CIDC C C V E W+K Sbjct: 7 MVIDAAKCIDCKACVASCKVA--NHTPEGQWRNWIK 40 >gi|213616092|ref|ZP_03371918.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 203 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|157363816|ref|YP_001470583.1| NADH dehydrogenase (quinone) [Thermotoga lettingae TMO] gi|157314420|gb|ABV33519.1| NADH dehydrogenase (quinone) [Thermotoga lettingae TMO] Length = 626 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YVV E C C C + CP + + E I ++CI CG+C +C AI+ Sbjct: 571 YVVNEQLCKGCGL--CAKSCPQNAIFGERGKPYKIDQEKCIKCGLCVQKCRFKAIE 624 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Query: 20 VCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VCP C ++ C CG+C CP +AI + Sbjct: 559 VCPSGTCVSF--KKYVVNEQLCKGCGLCAKSCPQNAIFGE 596 >gi|71064903|ref|YP_263630.1| putative 4Fe-4S ferredoxin [Psychrobacter arcticus 273-4] gi|71037888|gb|AAZ18196.1| putative 4Fe-4S ferredoxin [Psychrobacter arcticus 273-4] Length = 82 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + EG++ I PD C +C C CPVD Sbjct: 1 MALLITDECINCDV--CEPACPNEAISEGDDIYVIDPDLCTECVGHFDEPQCVVICPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTK 83 I P ++ S+ +++ IT K Sbjct: 59 I-----PHDPNHVETESDLMSKYKRITGK 82 >gi|15899490|ref|NP_344095.1| ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus P2] gi|284174261|ref|ZP_06388230.1| ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus 98/2] gi|13816112|gb|AAK42885.1| Ferredoxin like protein (zfx-like1) [Sulfolobus solfataricus P2] gi|261601262|gb|ACX90865.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 89 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V T+ C+ CK C +VCP + + + +H + C++CG CP AIK G Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIVVHYERCLECGAALVACPYGAIKFHFPEG 82 Query: 63 LELW 66 + Sbjct: 83 GISY 86 >gi|323184480|gb|EFZ69855.1| protein aegA [Escherichia coli 1357] Length = 654 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|301023818|ref|ZP_07187553.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 196-1] gi|312973299|ref|ZP_07787471.1| protein aegA [Escherichia coli 1827-70] gi|299880691|gb|EFI88902.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 196-1] gi|310331894|gb|EFP99129.1| protein aegA [Escherichia coli 1827-70] Length = 654 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|293415730|ref|ZP_06658373.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] gi|291433378|gb|EFF06357.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|237810768|ref|YP_002895219.1| ferredoxin [Burkholderia pseudomallei MSHR346] gi|251767337|ref|ZP_02266850.2| ferredoxin [Burkholderia mallei PRL-20] gi|237505466|gb|ACQ97784.1| ferredoxin [Burkholderia pseudomallei MSHR346] gi|243063120|gb|EES45306.1| ferredoxin [Burkholderia mallei PRL-20] Length = 125 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P++C +C C+ CPV+ Sbjct: 38 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVEC 95 Query: 55 IKPD 58 I D Sbjct: 96 IPQD 99 >gi|190150652|ref|YP_001969177.1| hydrogenase-2 operon protein HybA precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307246252|ref|ZP_07528333.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255236|ref|ZP_07537051.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259670|ref|ZP_07541394.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307264000|ref|ZP_07545601.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915783|gb|ACE62035.1| hydrogenase-2 operon protein HybA precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306852861|gb|EFM85085.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861785|gb|EFM93764.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866315|gb|EFM98179.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306870689|gb|EFN02432.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 345 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV CPV E + PD C C C CP + K D Sbjct: 108 IKKQCMHCVEPNCVTACPVQALTKDEKTGIVNYDPDICTGCRYCMVACPFNVPKYD 163 >gi|168238216|ref|ZP_02663274.1| glutamate synthase, small subunit subfamily protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737239|ref|YP_002115541.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712741|gb|ACF91962.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288936|gb|EDY28309.1| glutamate synthase, small subunit subfamily protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 653 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP N + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINNSVQVNAQKCIGCKSCVVACPFG 100 >gi|52549383|gb|AAU83232.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured archaeon GZfos27A8] Length = 642 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C C E+C VD I D+C+ CG C CP +A + E G +W Sbjct: 519 EKCNGCG--RCAELCRVDAISIVLGKAVIDKDKCVTCGWCIRGCPSEA-AIEKERGYAMW 575 Query: 67 LKIN 70 + N Sbjct: 576 IGAN 579 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C DCV D G+ I ++C CG C C VDAI Sbjct: 493 GC-ANDCVRAKRNDVGLIGQVRPEIDNEKCNGCGRCAELCRVDAI 536 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 22/69 (31%), Gaps = 14/69 (20%) Query: 34 AIHPDECIDCGVCEPECPVDAIKP-DTEPGLELWLKINSEYA-------------TQWPN 79 + C CG C CP D I+ + P L+ N + A PN Sbjct: 14 VVDAGLCTFCGACAAVCPNDRIEFREDGPALKEECPRNGQGACKDVCQRVVTFASKIGPN 73 Query: 80 ITTKKESLP 88 I K P Sbjct: 74 IFGFKAKPP 82 >gi|322831881|ref|YP_004211908.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rahnella sp. Y9602] gi|321167082|gb|ADW72781.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rahnella sp. Y9602] Length = 209 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C+ C +VCPV+ N + ++ C+ C +C CP AI L++ + Sbjct: 57 CHQCEDAPCAQVCPVNAITRENNAIHLNESLCVSCKLCGLACPFGAITFSGSTPLDMPVD 116 Query: 69 INSEYATQWPNITTKKES 86 N+ A P Sbjct: 117 CNTSKALPAPRPPRAISP 134 >gi|269140235|ref|YP_003296936.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Edwardsiella tarda EIB202] gi|267985896|gb|ACY85725.1| hydrogenase-3, iron-sulfur subunit (part of FHL complex) [Edwardsiella tarda EIB202] gi|304560065|gb|ADM42729.1| Formate hydrogenlyase subunit 2 [Edwardsiella tarda FL6-60] Length = 204 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C+ C VCPV+ + + ++ C+ C +C CP AI Sbjct: 49 QMCHHCEDAPCALVCPVNAITRQDGAIQLNESLCVGCKLCGIACPFGAI 97 >gi|256810171|ref|YP_003127540.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793371|gb|ACV24040.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 151 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C++ C E+CPVD Y E + + CI CG+C CP+ AI + + Sbjct: 42 CMQCENAPCKEICPVDAIYLKEGIPIVEKERCIACGMCAIACPIGAIFIKDKVAHK 97 >gi|239617512|ref|YP_002940834.1| Cobyrinic acid ac-diamide synthase [Kosmotoga olearia TBF 19.5.1] gi|239506343|gb|ACR79830.1| Cobyrinic acid ac-diamide synthase [Kosmotoga olearia TBF 19.5.1] Length = 287 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + CI C C C D G N ++ P C CG C CP++AI + Sbjct: 63 INDTCIACG--ICERTCRFDAIRPG-NPYSVDPYACEGCGACVLTCPINAISLNDN 115 Score = 40.5 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 G I+ D CI CG+CE C DAI+P ++ + Sbjct: 57 GGKKAEIN-DTCIACGICERTCRFDAIRPGNPYSVDPY 93 >gi|149191659|ref|ZP_01869902.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio shilonii AK1] gi|148834500|gb|EDL51494.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio shilonii AK1] Length = 204 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + C C C +VCP ++ E+ F+ + CI C C CP A + E Sbjct: 59 AYYTSIACNHCDEPACAKVCPSGAMHKREDGFVVVDEKVCIGCKHCANACPYGAPQYSKE 118 Query: 61 PGL 63 G Sbjct: 119 KGH 121 >gi|220929030|ref|YP_002505939.1| electron transfer flavoprotein subunit alpha [Clostridium cellulolyticum H10] gi|219999358|gb|ACL75959.1| Electron transfer flavoprotein alpha subunit [Clostridium cellulolyticum H10] Length = 399 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++++ C+ C C+ VCP + +N + I + C CG+C P+C AI + Sbjct: 6 ILSDKCVKCLQ--CINVCPCNAIKNDKNVVYID-NTCTLCGICIPKCSFSAISYNENFTK 62 Query: 64 ELW 66 + Sbjct: 63 SKF 65 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 L I D+C+ C C CP +AIK D Sbjct: 4 LQILSDKCVKCLQCINVCPCNAIKND 29 >gi|90579149|ref|ZP_01234959.1| electron transport complex protein RnfB [Vibrio angustum S14] gi|90439982|gb|EAS65163.1| electron transport complex protein RnfB [Vibrio angustum S14] Length = 194 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKSMHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 -DTEPGLEL 65 +T + Sbjct: 165 KETPDNWKW 173 >gi|78355128|ref|YP_386577.1| ferredoxin hydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217533|gb|ABB36882.1| Ferredoxin hydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 421 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 12/84 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E CI C C E CP + G H + CI+CG C CPV AI ++ Sbjct: 33 EKCIGCD--TCQEYCPTGAIFGDTGSAHSIPHEEICINCGQCLTHCPVGAIY-----EVQ 85 Query: 65 LWLKINSEYATQWPNITTKKESLP 88 W+ E + + + K ++P Sbjct: 86 SWV---RELSEKIKDPEIKVIAMP 106 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 17/28 (60%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 F+ I P++CI C C+ CP AI DT Sbjct: 27 FIQIDPEKCIGCDTCQEYCPTGAIFGDT 54 >gi|15803044|ref|NP_289074.1| putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 EDL933] gi|12516915|gb|AAG57631.1|AE005481_7 putative dimethyl sulfoxide reductase subunit B [Escherichia coli O157:H7 str. EDL933] Length = 145 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP + G+ + ++ D+C+ CG C CP A + + Sbjct: 7 AYTLSVSCNHCADPICTKNCPTMAMHKRPGDGIVRVNTDKCVGCGYCAWSCPYGAPQMNE 66 Query: 60 EPG 62 + G Sbjct: 67 QTG 69 >gi|56476992|ref|YP_158581.1| benzoyl-CoA oxygenase component A [Aromatoleum aromaticum EbN1] gi|56313035|emb|CAI07680.1| Benzoyl-CoA oxygenase component A [Aromatoleum aromaticum EbN1] Length = 416 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 30/93 (32%), Gaps = 22/93 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C E CP+D ++ D C C C P CP AI Sbjct: 18 EICIRCN--TCEETCPIDAITHDNLNYVVNFDICNGCLACVPPCPTGAI----------- 64 Query: 67 LKINSEYATQWPNITTKKE-SLPSAAKMDGVKQ 98 W N+ K SL K D + Sbjct: 65 --------DSWRNVERAKPYSLEEQFKWDVLPD 89 >gi|70991122|ref|XP_750410.1| NADH-quinone oxidoreductase, 23 kDa subunit [Aspergillus fumigatus Af293] gi|66848042|gb|EAL88372.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus fumigatus Af293] gi|159130884|gb|EDP55997.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus fumigatus A1163] Length = 228 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 127 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 184 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 + N+EYAT+ + K++ L + K + Sbjct: 185 ETS----------NAEYATETREELLYNKEKLLANGDKWE 214 >gi|302389092|ref|YP_003824913.1| aldo/keto reductase [Thermosediminibacter oceani DSM 16646] gi|302199720|gb|ADL07290.1| aldo/keto reductase [Thermosediminibacter oceani DSM 16646] Length = 318 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV C CK C+ CP F E N I+ ++C+ CG C CP AI+ Sbjct: 264 VVDSLCKGCK--TCLSACPNYAMEFAEERNKAYINREKCLTCGYCTASCPEFAIR 316 >gi|288561161|ref|YP_003424647.1| methyl viologen-reducing hydrogenase beta subunit MvhB [Methanobrevibacter ruminantium M1] gi|288543871|gb|ADC47755.1| methyl viologen-reducing hydrogenase beta subunit MvhB [Methanobrevibacter ruminantium M1] Length = 410 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CI C CV+ CP D + P+ C CG+C CPVDAI D E G Sbjct: 211 ADACIGCN--SCVDACPGDFISPKSDLTVALPEACAACGLCVNVCPVDAIDLDVEYGASK 268 Query: 66 W 66 + Sbjct: 269 F 269 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIK 56 ++C C CV CPVD + + D+CI CGVC CP +AI Sbjct: 141 DDCKGCGV--CVAECPVDAITLSAYGEPIEVDEDKCIQCGVCSQSCPWNAIF 190 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 13/68 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-----------FLAIHPDECIDCGVCEPECPV 52 V + CI C C + CP + + N + D CI C C CP Sbjct: 169 VDEDKCIQCGV--CSQSCPWNAIFIAGNAKPAKRSKVMKSFTLDADACIGCNSCVDACPG 226 Query: 53 DAIKPDTE 60 D I P ++ Sbjct: 227 DFISPKSD 234 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIK 56 + + D CI CG CE CP AI+ Sbjct: 1 MIVFNEDSCIKCGACEGVCPTAAIE 25 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 14/57 (24%) Query: 9 CILCKHTDCVEVCPVDCF--------YEGE----NFLAIHPDECIDCGVCEPECPVD 53 C+ C C VCP D +GE + + +P +C +CG C CP D Sbjct: 322 CVRCG--ACANVCPNDALQLDYVDKEIDGETVMRDRIIFNPSKCDECGECIDACPYD 376 >gi|257790388|ref|YP_003180994.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488809|ref|ZP_07947342.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|257474285|gb|ACV54605.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912114|gb|EFV33690.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 201 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C++C++ CV VCP + + + I ++CI C C CP A Sbjct: 57 CMMCENPPCVAVCPQGATTIRDEDGIVVIDKEKCIGCKSCMEACPYGA 104 >gi|298529028|ref|ZP_07016431.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510464|gb|EFI34367.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 670 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V TE C C CV +CP D + I C CGVC CP AI Sbjct: 598 VHTEKCSGCG--ICVPLCPYDAITMKMVDDHPRAEIDMTACKGCGVCTTACPSAAIVLHG 655 Query: 60 EPGLELWLKINS 71 +++ +I + Sbjct: 656 YEEEQIYAQIEA 667 >gi|254251376|ref|ZP_04944694.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] gi|124893985|gb|EAY67865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa AUO158] Length = 88 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|152999082|ref|YP_001364763.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160873678|ref|YP_001552994.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|217971766|ref|YP_002356517.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|151363700|gb|ABS06700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160859200|gb|ABX47734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|217496901|gb|ACK45094.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] gi|315265908|gb|ADT92761.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 188 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + +IH ++C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPY 104 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 14/74 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG----------VCEPECPVDAI 55 TE C+ C + CV CP + A D+C C C CP DA+ Sbjct: 89 TEKCVGCMY--CVAACPYKVRFMNPETKA--ADKCNFCKDSRLARGEEPACVTVCPTDAL 144 Query: 56 KPDTEPGLELWLKI 69 + + I Sbjct: 145 VFGDANDPQSDVAI 158 >gi|28199470|ref|NP_779784.1| ferredoxin [Xylella fastidiosa Temecula1] gi|182682201|ref|YP_001830361.1| ferredoxin [Xylella fastidiosa M23] gi|28057585|gb|AAO29433.1| ferredoxin II [Xylella fastidiosa Temecula1] gi|182632311|gb|ACB93087.1| electron transport complex, RnfABCDGE type, B subunit [Xylella fastidiosa M23] gi|307578471|gb|ADN62440.1| ferredoxin [Xylella fastidiosa subsp. fastidiosa GB514] Length = 139 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + + C C +C P CPVD I+ Sbjct: 82 AWIVEADCIGC--TKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPACPVDCIE 135 >gi|83310341|ref|YP_420605.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82945182|dbj|BAE50046.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 217 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C +VCP + + I D CI CG C CP A Sbjct: 58 CMHCDEPPCRDVCPTTATTKRADGMVMIDYDICIGCGYCIVACPYQA 104 >gi|32034180|ref|ZP_00134402.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208796|ref|YP_001054021.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae L20] gi|165976757|ref|YP_001652350.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250582|ref|ZP_07336779.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253088|ref|ZP_07339238.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248365|ref|ZP_07530388.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252972|ref|ZP_07534860.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257398|ref|ZP_07539168.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261818|ref|ZP_07543483.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097588|gb|ABN74416.1| hydrogenase-2 operon protein HybA precursor [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876858|gb|ABY69906.1| hydrogenase-2 operon protein hybA precursor [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302648073|gb|EFL78279.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650570|gb|EFL80729.1| hydrogenase 2 protein HybA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855103|gb|EFM87283.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859610|gb|EFM91635.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864248|gb|EFM96161.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868482|gb|EFN00294.1| Hydrogenase-2 operon protein hybA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 345 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV CPV E + PD C C C CP + K D Sbjct: 108 IKKQCMHCVEPNCVTACPVQALTKDEKTGIVNYDPDICTGCRYCMVACPFNVPKYD 163 >gi|320353704|ref|YP_004195043.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Desulfobulbus propionicus DSM 2032] gi|320122206|gb|ADW17752.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Desulfobulbus propionicus DSM 2032] Length = 633 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C C C + CPV+ E + I D+CI CG C C A++ Sbjct: 573 PWINAEKCKGCG--KCAKKCPVEAISGELKQPHVIDQDKCIKCGACLQSCKFGAVE 626 Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+ ++C CG C +CPV+AI + + Sbjct: 575 INAEKCKGCGKCAKKCPVEAISGELKQPH 603 >gi|269963964|ref|ZP_06178273.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio harveyi 1DA3] gi|269831307|gb|EEZ85457.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio harveyi 1DA3] Length = 249 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 164 >gi|256810428|ref|YP_003127797.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus fervens AG86] gi|256793628|gb|ACV24297.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus fervens AG86] Length = 247 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C LC C++ CP + + F+ I +C+ CG C+ CP +AI E + + K Sbjct: 159 CKLCL--KCIDACPNGAIIKRDGFVEISIHKCLGCGNCKKICPYNAIVEGKEIKMRVR-K 215 Query: 69 INSE 72 I++E Sbjct: 216 IDAE 219 >gi|323967911|gb|EGB63323.1| glutamate synthase [Escherichia coli M863] gi|327252117|gb|EGE63789.1| protein aegA [Escherichia coli STEC_7v] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|303256511|ref|ZP_07342525.1| formate-dependent nitrite reductase, NrfC protein [Burkholderiales bacterium 1_1_47] gi|331000610|ref|ZP_08324268.1| putative thiosulfate reductase electron transport protein phsb [Parasutterella excrementihominis YIT 11859] gi|302860002|gb|EFL83079.1| formate-dependent nitrite reductase, NrfC protein [Burkholderiales bacterium 1_1_47] gi|329571172|gb|EGG52877.1| putative thiosulfate reductase electron transport protein phsb [Parasutterella excrementihominis YIT 11859] Length = 246 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVD 53 +C C CV VCP + N + + PD+C+ C C CP + Sbjct: 116 SCQQCLDAPCVRVCPTQAAHRDPETNIVTMDPDKCVGCKYCIAACPYN 163 >gi|289422577|ref|ZP_06424420.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Peptostreptococcus anaerobius 653-L] gi|289157149|gb|EFD05771.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Peptostreptococcus anaerobius 653-L] Length = 595 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 7/53 (13%) Query: 9 CILCKHTDCVEV-CPVDCF--YEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 CI CK C++ CP Y+G L +I P++C+ CG+C CPV AIK Sbjct: 540 CIGCK--TCIKTNCPPLRMKKYDGIEKLKSSIDPNQCVGCGICAQVCPVGAIK 590 >gi|260856818|ref|YP_003230709.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O26:H11 str. 11368] gi|260869386|ref|YP_003235788.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O111:H- str. 11128] gi|331654190|ref|ZP_08355190.1| electron transport protein HydN [Escherichia coli M718] gi|257755467|dbj|BAI26969.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O26:H11 str. 11368] gi|257765742|dbj|BAI37237.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O111:H- str. 11128] gi|323154924|gb|EFZ41116.1| aegA domain protein [Escherichia coli EPECa14] gi|323180131|gb|EFZ65683.1| protein aegA domain protein [Escherichia coli 1180] gi|331047572|gb|EGI19649.1| electron transport protein HydN [Escherichia coli M718] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|288573617|ref|ZP_06391974.1| putative PAS/PAC sensor protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569358|gb|EFC90915.1| putative PAS/PAC sensor protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 586 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 4/65 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 Y V +C C CV CPV D C+ CG C CPV A I+ D Sbjct: 14 YTVKNDCQDC--YKCVRACPVKAIKIENGHAQEISDHCVLCGRCVEICPVGAKRIRDDRP 71 Query: 61 PGLEL 65 L Sbjct: 72 EAERL 76 >gi|91226902|ref|ZP_01261499.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 12G01] gi|91188865|gb|EAS75150.1| tetrathionate reductase, subunit B [Vibrio alginolyticus 12G01] Length = 255 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 +++ C C + CV VCPV ++ E+ + + C+ C C CP DA I D Sbjct: 102 AFMLPRLCNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINED 161 Query: 59 T 59 T Sbjct: 162 T 162 >gi|15803230|ref|NP_289262.1| electron transport protein HydN [Escherichia coli O157:H7 EDL933] gi|25285312|pir||H85919 hypothetical protein hydN [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12517158|gb|AAG57820.1|AE005499_7 involved in electron transport from formate to hydrogen, Fe-S centers [Escherichia coli O157:H7 str. EDL933] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|238793594|ref|ZP_04637217.1| Hydrogenase-2 operon protein hybA [Yersinia intermedia ATCC 29909] gi|238727009|gb|EEQ18540.1| Hydrogenase-2 operon protein hybA [Yersinia intermedia ATCC 29909] Length = 342 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 + + C+ C +CV VCPV + + P+ C C C CP + K D + Sbjct: 113 IKKQCMHCVDPNCVSVCPVSALRKDAKTGIVHYDPNICTGCRYCMVGCPFNVPKYDYD 170 >gi|332161836|ref|YP_004298413.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605661|emb|CBY27159.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica Y11] gi|325666066|gb|ADZ42710.1| electron transport complex protein RnfB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 207 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 163 >gi|301631489|ref|XP_002944830.1| PREDICTED: hypothetical protein LOC100488392 [Xenopus (Silurana) tropicalis] Length = 1458 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 12/61 (19%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP +G I +CI CG CE CPVD+IK Sbjct: 1218 ERCIACKL--CEAVCPAMAITIESDVRADGSRRTTRYDIDLTKCIFCGFCEESCPVDSIK 1275 Query: 57 P 57 Sbjct: 1276 F 1276 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI +++ Sbjct: 1218 ERCIACKLCEAVCPAMAITIESD 1240 >gi|291279072|ref|YP_003495907.1| molybdopterin oxidoreductase 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] gi|290753774|dbj|BAI80151.1| molybdopterin oxidoreductase, 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] Length = 191 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C CV VCP ++ ++ + I CI C C CP DA + E Sbjct: 58 YFLPSQCNHCDDPPCVHVCPTKASHKRDDGIVYIDRGRCIGCKYCIVSCPYDARFFNEEL 117 Query: 62 G 62 G Sbjct: 118 G 118 >gi|282857225|ref|ZP_06266469.1| ferredoxin [Pyramidobacter piscolens W5455] gi|282585011|gb|EFB90335.1| ferredoxin [Pyramidobacter piscolens W5455] Length = 279 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T CI C CV+VCP I P C++CG+C +CPV AI Sbjct: 214 VCTVGCIGC--QMCVKVCPKQTISMKGALAVIDPSNCVNCGLCAAKCPVHAI 263 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 16/43 (37%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CV+ C D + + D+C+ C C CP I Sbjct: 147 GFGTCVKACKFDAIHVINGVAKVDRDKCVGCQACVEACPRGII 189 >gi|269793046|ref|YP_003317950.1| glycyl-radical enzyme activating protein family [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100681|gb|ACZ19668.1| glycyl-radical enzyme activating protein family [Thermanaerovibrio acidaminovorans DSM 6589] Length = 301 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C+ C C CP GE L + C+ CG+C CP DA Sbjct: 53 ERCVGCG--RCALACPAGAISYGE-HLRLDRSRCVRCGMCAQACPADA 97 Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 37 PDECIDCGVCEPECPVDAIKP 57 P+ C+ CG C CP AI Sbjct: 52 PERCVGCGRCALACPAGAISY 72 >gi|167622346|ref|YP_001672640.1| dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] gi|167352368|gb|ABZ74981.1| Dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] Length = 207 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ +C C C + CP ++ + + + D CI C CE CP A + + Sbjct: 61 AYYLSISCNHCAEPACTKACPTGAMHKRSQDGLVVVDTDVCIGCRYCEMACPYGAPQYNP 120 Query: 60 E 60 E Sbjct: 121 E 121 >gi|149189646|ref|ZP_01867928.1| tetrathionate reductase, subunit B [Vibrio shilonii AK1] gi|148836458|gb|EDL53413.1| tetrathionate reductase, subunit B [Vibrio shilonii AK1] Length = 255 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDT 59 C C + CV VCPV ++ E+ + + C+ C C CP DA I DT Sbjct: 109 CNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDARFINEDT 162 >gi|78776861|ref|YP_393176.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] gi|78497401|gb|ABB43941.1| 4Fe-4S ferredoxin, iron-sulfur binding [Sulfurimonas denitrificans DSM 1251] Length = 84 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ + CI C C E CP EG+ I PD C +C C CPVD Sbjct: 1 MALIINDECIACD--ACREECPTIAIEEGDPIYFIDPDRCTECVGVYDEPACISVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDKD 64 >gi|238792005|ref|ZP_04635641.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia intermedia ATCC 29909] gi|238728636|gb|EEQ20154.1| Anaerobic dimethyl sulfoxide reductase chain B [Yersinia intermedia ATCC 29909] Length = 205 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C CV CP + E + + ++ D C+ C CE CP A + D + Sbjct: 60 YYLSIACNHCSSPTCVTGCPTGAMHKREEDGLVVVNQDLCVGCRYCEMRCPYGAPQFDAK 119 Query: 61 PGL 63 L Sbjct: 120 KKL 122 >gi|257453974|ref|ZP_05619250.1| NADH-quinone oxidoreductase subunit i [Enhydrobacter aerosaccus SK60] gi|257448639|gb|EEV23606.1| NADH-quinone oxidoreductase subunit i [Enhydrobacter aerosaccus SK60] Length = 183 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 12/88 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 61 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 118 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKK 84 + L + + N Y + I+ Sbjct: 119 MTPDFELGEYNRQNLVYEKEHLLISGPG 146 >gi|163814915|ref|ZP_02206303.1| hypothetical protein COPEUT_01066 [Coprococcus eutactus ATCC 27759] gi|158449854|gb|EDP26849.1| hypothetical protein COPEUT_01066 [Coprococcus eutactus ATCC 27759] Length = 597 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 5 VTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++E CI CK C+ CP + +AI C CG+C CPV AI Sbjct: 543 ISEKCIQCK--KCIREIGCP--AIILKDGKVAIDESLCTGCGLCAQICPVGAI 591 >gi|20428812|emb|CAD21687.1| phenylacetyl CoA [Azoarcus evansii] Length = 238 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V C+ C C EVCP + + L I D CI C C CP +A Sbjct: 76 FVPVACMHCDEPPCEEVCPTKATTKRPDGLVAIDYDTCIGCANCVMACPYEA 127 >gi|289810899|ref|ZP_06541528.1| putative anaerobic reductase component [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 125 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 Y ++ +C C C + CP + G+ + + D+C+ CG C CP A Sbjct: 71 AYTLSISCNHCADPVCTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWSCPYGA 125 >gi|144898861|emb|CAM75725.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum gryphiswaldense MSR-1] Length = 327 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPD 58 + ++C+ C CV VCPV + + + + D CI C C CP + + Sbjct: 114 FIKKSCMHCVDPSCVSVCPVSAMTKDKQTGIVGYNADICIGCRYCVASCPFGVPQSE 170 >gi|152995572|ref|YP_001340407.1| electron transport complex protein RnfB [Marinomonas sp. MWYL1] gi|150836496|gb|ABR70472.1| electron transport complex, RnfABCDGE type, B subunit [Marinomonas sp. MWYL1] Length = 198 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 113 DECIGC--TKCIQACPVDAILGAAKQMHTVIADECTGCDLCVEPCPVDCI 160 Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D + E I DECI C C CPVDAI Sbjct: 90 VEAVPLDGDHGTESAKRVAVIREDECIGCTKCIQACPVDAI 130 Score = 34.7 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 137 MHTVIADECTGCDL--CVEPCPVDCI 160 >gi|221066934|ref|ZP_03543039.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni KF-1] gi|220711957|gb|EED67325.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni KF-1] Length = 224 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK----P 57 V+ E CI C T C++ CP D + + D C C +C P CPVD I+ Sbjct: 88 VIDEAWCIGC--TLCIKACPTDAILGANKRMHTVIADHCTGCELCIPVCPVDCIELINAS 145 Query: 58 DTEPGLELWLKINSEYAT 75 G W +E+A Sbjct: 146 ADTTGWSAWSAAQAEHAR 163 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 21/83 (25%), Gaps = 36/83 (43%) Query: 9 CILCKHTDC-------------VEVCPVDC----------------------FYEGENFL 33 C C + DC + CP E L Sbjct: 27 CTRCGYPDCASYAQAIASGEAAINQCPPGGQEGVRRLASITGRPELPLNPENGLEAPRAL 86 Query: 34 -AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CP DAI Sbjct: 87 AVIDEAWCIGCTLCIKACPTDAI 109 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ ++C C+ C+ VCPVDC Sbjct: 116 MHTVIADHCTGCEL--CIPVCPVDCI 139 >gi|222054116|ref|YP_002536478.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221563405|gb|ACM19377.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 261 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ + + + CI CG C CP Sbjct: 127 AFFVPKLCNQCDNPPCVQVCPVGATYQTADGVVLVDRSWCIGCGYCIMGCPYG 179 >gi|219667677|ref|YP_002458112.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219537937|gb|ACL19676.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 206 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA 54 C C++ CV+VCPV Y+ E+ + I+ D CI C C CP +A Sbjct: 65 ACQHCENAACVKVCPVGATYKDESGRVVINYDRCIGCRFCMAACPYNA 112 >gi|23013477|ref|ZP_00053367.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 217 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C +VCP + + I D CI CG C CP A Sbjct: 58 CMHCDEPPCRDVCPTTATTKRADGMVMIDYDICIGCGYCIVACPYQA 104 >gi|330998930|ref|ZP_08322657.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329576144|gb|EGG57663.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 253 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPV 52 + C C++ CV+VCP + + +H DE CI C +C+ CP Sbjct: 58 IPVMCNHCENPQCVKVCPTGAMFISPEGVVLHNDEVCIGCRLCQKACPY 106 >gi|326402930|ref|YP_004283011.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] gi|325049791|dbj|BAJ80129.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] Length = 170 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EG---ENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC EG F I+ CI CG CE CP AI+ Sbjct: 49 ERCVSCYL--CAVACPVDCISLQKTEAEGRWYPEFFRINFSRCIFCGFCEEACPTYAIQL 106 Query: 58 DTEPGLELWLKINSEYATQWPNITTKKESLP 88 + + + + N Y + I+ + Sbjct: 107 TPDFEMSEYDRQNLVYEKEHLLISGTGKYPD 137 >gi|297571805|ref|YP_003697579.1| dimethylsulfoxide reductase, chain B [Arcanobacterium haemolyticum DSM 20595] gi|296932152|gb|ADH92960.1| dimethylsulfoxide reductase, chain B [Arcanobacterium haemolyticum DSM 20595] Length = 212 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C++ C++VCP + + + +C+ C C+ CP A + ++E Sbjct: 67 AYYTSISCNHCENPVCMQVCPTTAMTRRPDGTVYVDESKCVGCRYCQWACPYGAPQLNSE 126 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKY 103 G + +Y ++ + A + + EKY Sbjct: 127 TGHMSKCDLCYDYRSEGKDPACVSACPSRALDWGPIDELREKY 169 >gi|268680891|ref|YP_003305322.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618922|gb|ACZ13287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 220 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 C C CV VCP + + E + + P +CI C C CP DA D Sbjct: 59 CNHCIDAPCVSVCPTNASHFAEGGIVKVDPHKCILCKGCMEACPYDARFVDD 110 >gi|217968097|ref|YP_002353603.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dictyoglomus turgidum DSM 6724] gi|217337196|gb|ACK42989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dictyoglomus turgidum DSM 6724] Length = 369 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 CI C CV+ CP + + P+ CI CG C CP AIK Sbjct: 195 CIGC--RRCVDHCPTGALEMVDKKSKLTRPELCIGCGECAVVCPTSAIK 241 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 15/34 (44%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 +P+ CI C C CP A++ + ++ Sbjct: 191 NPNLCIGCRRCVDHCPTGALEMVDKKSKLTRPEL 224 >gi|193215552|ref|YP_001996751.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089029|gb|ACF14304.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chloroherpeton thalassium ATCC 35110] Length = 199 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C++T C+ CP Y+ E+ + I+ D CI C C CP DA P +E Sbjct: 60 CMHCENTPCLSACPTGATYKTEDGIVRINYDRCIGCYACMIACPYDARYPYDGDDVEK 117 >gi|169335902|ref|ZP_02863095.1| hypothetical protein ANASTE_02337 [Anaerofustis stercorihominis DSM 17244] gi|169258640|gb|EDS72606.1| hypothetical protein ANASTE_02337 [Anaerofustis stercorihominis DSM 17244] Length = 202 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + E CI CK C +CP YE + I + C+ CG+C CPV A++ Sbjct: 149 YFINETCINCK--KCFNLCPQSAIYELNGIMNIKNENCLHCGLCYENCPVKAVE 200 >gi|152979394|ref|YP_001345023.1| electron transport complex protein RnfB [Actinobacillus succinogenes 130Z] gi|150841117|gb|ABR75088.1| electron transport complex, RnfABCDGE type, B subunit [Actinobacillus succinogenes 130Z] Length = 189 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-T 59 ++ + CI C T CV+ CPVD L + P+ C C +C CP D I + Sbjct: 104 AFIHEDMCIGC--TKCVQACPVDAIIGTNKTLHTVIPELCTGCELCVAPCPTDCITMEKV 161 Query: 60 EPGLELW 66 EP +E W Sbjct: 162 EPKIENW 168 >gi|170765926|ref|ZP_02900737.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] gi|170125072|gb|EDS94003.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|156934238|ref|YP_001438154.1| hypothetical protein ESA_02068 [Cronobacter sakazakii ATCC BAA-894] gi|156532492|gb|ABU77318.1| hypothetical protein ESA_02068 [Cronobacter sakazakii ATCC BAA-894] Length = 162 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C +VCPV+ + ++ C+ C +C CP AI+ Sbjct: 10 QLCHHCEDAPCAQVCPVNAITREAGAIQLNESLCVSCKLCGIACPFGAIEF 60 >gi|89897565|ref|YP_521052.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219670692|ref|YP_002461127.1| dimethylsulfoxide reductase subunit B [Desulfitobacterium hafniense DCB-2] gi|89337013|dbj|BAE86608.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219540952|gb|ACL22691.1| dimethylsulfoxide reductase, chain B [Desulfitobacterium hafniense DCB-2] Length = 192 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 Y ++ +C CK CV+ CP + GE+ H D CI C C CP + Sbjct: 51 AYYLSMSCNHCKEAKCVKGCPTGAMHFGEDGTVQHDKDMCIGCKYCVWNCPYSVPQY 107 >gi|322694431|gb|EFY86261.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Metarhizium acridum CQMa 102] Length = 320 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 219 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 276 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 277 ESP----------NAEYATE 286 >gi|315615112|gb|EFU95749.1| hydrogenase-4 component A [Escherichia coli 3431] Length = 164 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 10 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 60 >gi|257790284|ref|YP_003180890.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830097|ref|ZP_08163554.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474181|gb|ACV54501.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487564|gb|EGC90002.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 227 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 TY +T C C++ +CV+VCP ++ E+ I +CI C C CP + E Sbjct: 57 TYFLTVQCQHCENPECVKVCPTGASHKLEDGTVQIDKSKCIGCQFCAMSCPYSVRYLNEE 116 Query: 61 PG 62 G Sbjct: 117 EG 118 >gi|257790233|ref|YP_003180839.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474130|gb|ACV54450.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 216 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 60 SYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 >gi|158521885|ref|YP_001529755.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510711|gb|ABW67678.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 362 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V +NC C CVE C ++ + + + CI CG C CP +A Sbjct: 289 ARVNPDNCTGCG--TCVEHCQMEALTLDNDMVVLQESWCIGCGNCAGACPSEA 339 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 ++PD C CG C C ++A+ D + Sbjct: 291 VNPDNCTGCGTCVEHCQMEALTLDND 316 >gi|15832823|ref|NP_311596.1| electron transport protein HydN [Escherichia coli O157:H7 str. Sakai] gi|16130620|ref|NP_417193.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K-12 substr. MG1655] gi|82545212|ref|YP_409159.1| electron transport protein HydN [Shigella boydii Sb227] gi|89109500|ref|AP_003280.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K-12 substr. W3110] gi|110642833|ref|YP_670563.1| electron transport protein HydN [Escherichia coli 536] gi|110806662|ref|YP_690182.1| electron transport protein HydN [Shigella flexneri 5 str. 8401] gi|117624944|ref|YP_853932.1| electron transport protein HydN [Escherichia coli APEC O1] gi|157155890|ref|YP_001464021.1| electron transport protein HydN [Escherichia coli E24377A] gi|157162159|ref|YP_001459477.1| electron transport protein HydN [Escherichia coli HS] gi|168749963|ref|ZP_02774985.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4113] gi|168755457|ref|ZP_02780464.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4401] gi|168762889|ref|ZP_02787896.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4501] gi|168768803|ref|ZP_02793810.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4486] gi|168774756|ref|ZP_02799763.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4196] gi|168778694|ref|ZP_02803701.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4076] gi|168787967|ref|ZP_02812974.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC869] gi|168800207|ref|ZP_02825214.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC508] gi|170019041|ref|YP_001723995.1| electron transport protein HydN [Escherichia coli ATCC 8739] gi|170082289|ref|YP_001731609.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K-12 substr. DH10B] gi|170682992|ref|YP_001744860.1| electron transport protein HydN [Escherichia coli SMS-3-5] gi|187730815|ref|YP_001881539.1| electron transport protein HydN [Shigella boydii CDC 3083-94] gi|188496192|ref|ZP_03003462.1| 4Fe-4S binding domain protein [Escherichia coli 53638] gi|191166802|ref|ZP_03028628.1| 4Fe-4S binding domain protein [Escherichia coli B7A] gi|191171388|ref|ZP_03032937.1| 4Fe-4S binding domain protein [Escherichia coli F11] gi|193065052|ref|ZP_03046127.1| 4Fe-4S binding domain protein [Escherichia coli E22] gi|193069647|ref|ZP_03050599.1| 4Fe-4S binding domain protein [Escherichia coli E110019] gi|194427882|ref|ZP_03060428.1| 4Fe-4S binding domain protein [Escherichia coli B171] gi|194438980|ref|ZP_03071064.1| 4Fe-4S binding domain protein [Escherichia coli 101-1] gi|195938462|ref|ZP_03083844.1| electron transport protein HydN [Escherichia coli O157:H7 str. EC4024] gi|208809271|ref|ZP_03251608.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4206] gi|208814231|ref|ZP_03255560.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4045] gi|208821974|ref|ZP_03262294.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4042] gi|209397141|ref|YP_002272175.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4115] gi|209920152|ref|YP_002294236.1| electron transport protein HydN [Escherichia coli SE11] gi|215488028|ref|YP_002330459.1| electron transport protein HydN [Escherichia coli O127:H6 str. E2348/69] gi|217326848|ref|ZP_03442931.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. TW14588] gi|218547779|ref|YP_002381570.1| electron transport protein HydN [Escherichia fergusonii ATCC 35469] gi|218555255|ref|YP_002388168.1| electron transport protein HydN [Escherichia coli IAI1] gi|218559701|ref|YP_002392614.1| electron transport protein HydN [Escherichia coli S88] gi|218690835|ref|YP_002399047.1| electron transport protein HydN [Escherichia coli ED1a] gi|218696304|ref|YP_002403971.1| electron transport protein HydN [Escherichia coli 55989] gi|218706207|ref|YP_002413726.1| electron transport protein HydN [Escherichia coli UMN026] gi|238901850|ref|YP_002927646.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli BW2952] gi|253772432|ref|YP_003035263.1| electron transporter HydN [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162644|ref|YP_003045752.1| electron transport protein HydN [Escherichia coli B str. REL606] gi|254794653|ref|YP_003079490.1| electron transport protein HydN [Escherichia coli O157:H7 str. TW14359] gi|256019510|ref|ZP_05433375.1| electron transport protein HydN [Shigella sp. D9] gi|256024780|ref|ZP_05438645.1| electron transport protein HydN [Escherichia sp. 4_1_40B] gi|260845355|ref|YP_003223133.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O103:H2 str. 12009] gi|261226007|ref|ZP_05940288.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261256735|ref|ZP_05949268.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O157:H7 str. FRIK966] gi|293406204|ref|ZP_06650130.1| electron transporter HydN [Escherichia coli FVEC1412] gi|293412068|ref|ZP_06654791.1| electron transporter HydN [Escherichia coli B354] gi|293415962|ref|ZP_06658602.1| electron transporter HydN [Escherichia coli B185] gi|293449026|ref|ZP_06663447.1| electron transporter HydN [Escherichia coli B088] gi|298381941|ref|ZP_06991538.1| electron transporter HydN [Escherichia coli FVEC1302] gi|300919256|ref|ZP_07135778.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300930569|ref|ZP_07145962.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|300947011|ref|ZP_07161236.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301027406|ref|ZP_07190744.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|301645309|ref|ZP_07245258.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|306812409|ref|ZP_07446607.1| electron transport protein HydN [Escherichia coli NC101] gi|307139400|ref|ZP_07498756.1| electron transport protein HydN [Escherichia coli H736] gi|307314402|ref|ZP_07594007.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|312965263|ref|ZP_07779498.1| aegA domain protein [Escherichia coli 2362-75] gi|312973078|ref|ZP_07787251.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|331643396|ref|ZP_08344527.1| electron transport protein HydN [Escherichia coli H736] gi|331648431|ref|ZP_08349519.1| electron transport protein HydN [Escherichia coli M605] gi|331658818|ref|ZP_08359760.1| electron transport protein HydN [Escherichia coli TA206] gi|331664264|ref|ZP_08365170.1| electron transport protein HydN [Escherichia coli TA143] gi|331669445|ref|ZP_08370291.1| electron transport protein HydN [Escherichia coli TA271] gi|331678685|ref|ZP_08379359.1| electron transport protein HydN [Escherichia coli H591] gi|331684325|ref|ZP_08384917.1| electron transport protein HydN [Escherichia coli H299] gi|77417745|sp|P0AAK6|HYDN_ECO57 RecName: Full=Electron transport protein hydN gi|77417746|sp|P0AAK5|HYDN_ECOL6 RecName: Full=Electron transport protein hydN gi|77417747|sp|P0AAK4|HYDN_ECOLI RecName: Full=Electron transport protein hydN gi|216575|dbj|BAA03314.1| 4Fe-4S iron-sulfer protein, putative [Escherichia coli] gi|882606|gb|AAA69223.1| 4Fe-4S iron-sulfur protein [Escherichia coli str. K-12 substr. MG1655] gi|1789067|gb|AAC75755.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K-12 substr. MG1655] gi|13363040|dbj|BAB36992.1| electron transport protein HydN [Escherichia coli O157:H7 str. Sakai] gi|81246623|gb|ABB67331.1| HydN [Shigella boydii Sb227] gi|85675534|dbj|BAE76790.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K12 substr. W3110] gi|110344425|gb|ABG70662.1| putative electron-transport protein [Escherichia coli 536] gi|110616210|gb|ABF04877.1| Electron transport protein hydN [Shigella flexneri 5 str. 8401] gi|115514068|gb|ABJ02143.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli APEC O1] gi|157067839|gb|ABV07094.1| 4Fe-4S binding domain protein [Escherichia coli HS] gi|157077920|gb|ABV17628.1| 4Fe-4S binding domain protein [Escherichia coli E24377A] gi|169753969|gb|ACA76668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|169890124|gb|ACB03831.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli str. K-12 substr. DH10B] gi|170520710|gb|ACB18888.1| 4Fe-4S binding domain protein [Escherichia coli SMS-3-5] gi|187427807|gb|ACD07081.1| 4Fe-4S binding domain protein [Shigella boydii CDC 3083-94] gi|187769622|gb|EDU33466.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4196] gi|188015768|gb|EDU53890.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4113] gi|188491391|gb|EDU66494.1| 4Fe-4S binding domain protein [Escherichia coli 53638] gi|189003161|gb|EDU72147.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4076] gi|189357299|gb|EDU75718.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4401] gi|189362067|gb|EDU80486.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4486] gi|189366905|gb|EDU85321.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4501] gi|189372111|gb|EDU90527.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC869] gi|189377524|gb|EDU95940.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC508] gi|190903173|gb|EDV62896.1| 4Fe-4S binding domain protein [Escherichia coli B7A] gi|190908322|gb|EDV67912.1| 4Fe-4S binding domain protein [Escherichia coli F11] gi|192927349|gb|EDV81968.1| 4Fe-4S binding domain protein [Escherichia coli E22] gi|192957010|gb|EDV87461.1| 4Fe-4S binding domain protein [Escherichia coli E110019] gi|194414115|gb|EDX30391.1| 4Fe-4S binding domain protein [Escherichia coli B171] gi|194422101|gb|EDX38104.1| 4Fe-4S binding domain protein [Escherichia coli 101-1] gi|208729072|gb|EDZ78673.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4206] gi|208735508|gb|EDZ84195.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4045] gi|208742097|gb|EDZ89779.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4042] gi|209158541|gb|ACI35974.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4115] gi|209761968|gb|ACI79296.1| electron transport protein HydN [Escherichia coli] gi|209761970|gb|ACI79297.1| electron transport protein HydN [Escherichia coli] gi|209761972|gb|ACI79298.1| electron transport protein HydN [Escherichia coli] gi|209761976|gb|ACI79300.1| electron transport protein HydN [Escherichia coli] gi|209913411|dbj|BAG78485.1| electron transport protein [Escherichia coli SE11] gi|215266100|emb|CAS10525.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O127:H6 str. E2348/69] gi|217319215|gb|EEC27640.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. TW14588] gi|218353036|emb|CAU98861.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli 55989] gi|218355320|emb|CAQ87927.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia fergusonii ATCC 35469] gi|218362023|emb|CAQ99630.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli IAI1] gi|218366470|emb|CAR04222.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli S88] gi|218428399|emb|CAR09325.2| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli ED1a] gi|218433304|emb|CAR14204.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli UMN026] gi|222034406|emb|CAP77148.1| electron transport protein hydN [Escherichia coli LF82] gi|238861128|gb|ACR63126.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli BW2952] gi|242378270|emb|CAQ33045.1| putative electron transport protein HydN [Escherichia coli BL21(DE3)] gi|253323476|gb|ACT28078.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974545|gb|ACT40216.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli B str. REL606] gi|253978712|gb|ACT44382.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli BL21(DE3)] gi|254594053|gb|ACT73414.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O157:H7 str. TW14359] gi|257760502|dbj|BAI31999.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli O103:H2 str. 12009] gi|260448237|gb|ACX38659.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|281179717|dbj|BAI56047.1| electron transport protein [Escherichia coli SE15] gi|291322116|gb|EFE61545.1| electron transporter HydN [Escherichia coli B088] gi|291426210|gb|EFE99242.1| electron transporter HydN [Escherichia coli FVEC1412] gi|291432151|gb|EFF05133.1| electron transporter HydN [Escherichia coli B185] gi|291468839|gb|EFF11330.1| electron transporter HydN [Escherichia coli B354] gi|294489974|gb|ADE88730.1| 4Fe-4S binding domain protein [Escherichia coli IHE3034] gi|298277081|gb|EFI18597.1| electron transporter HydN [Escherichia coli FVEC1302] gi|299879300|gb|EFI87511.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|300413653|gb|EFJ96963.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300453352|gb|EFK16972.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300461561|gb|EFK25054.1| 4Fe-4S binding domain protein [Escherichia coli MS 187-1] gi|301076402|gb|EFK91208.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|305854447|gb|EFM54885.1| electron transport protein HydN [Escherichia coli NC101] gi|306905970|gb|EFN36491.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|307625718|gb|ADN70022.1| electron transport protein HydN [Escherichia coli UM146] gi|309703072|emb|CBJ02404.1| electron transport protein [Escherichia coli ETEC H10407] gi|310333020|gb|EFQ00234.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|312290099|gb|EFR17984.1| aegA domain protein [Escherichia coli 2362-75] gi|312947241|gb|ADR28068.1| electron transport protein HydN [Escherichia coli O83:H1 str. NRG 857C] gi|315061989|gb|ADT76316.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli W] gi|315137320|dbj|BAJ44479.1| electron transporter hydN [Escherichia coli DH1] gi|315615099|gb|EFU95736.1| hydrogenase-4 component A [Escherichia coli 3431] gi|320173435|gb|EFW48634.1| Electron transport protein HydN [Shigella dysenteriae CDC 74-1112] gi|320180866|gb|EFW55789.1| Electron transport protein HydN [Shigella boydii ATCC 9905] gi|320186499|gb|EFW61227.1| Electron transport protein HydN [Shigella flexneri CDC 796-83] gi|320189045|gb|EFW63704.1| Electron transport protein HydN [Escherichia coli O157:H7 str. EC1212] gi|320194847|gb|EFW69476.1| Electron transport protein HydN [Escherichia coli WV_060327] gi|320202359|gb|EFW76929.1| Electron transport protein HydN [Escherichia coli EC4100B] gi|320640356|gb|EFX09895.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O157:H7 str. G5101] gi|320645903|gb|EFX14884.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O157:H- str. 493-89] gi|320651203|gb|EFX19638.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O157:H- str. H 2687] gi|320656753|gb|EFX24641.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320667347|gb|EFX34305.1| formate dehydrogenase-H ferredoxin subunit [Escherichia coli O157:H7 str. LSU-61] gi|323159862|gb|EFZ45833.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323167114|gb|EFZ52832.1| hydrogenase-4 component A [Shigella sonnei 53G] gi|323173004|gb|EFZ58635.1| hydrogenase-4 component A [Escherichia coli LT-68] gi|323188875|gb|EFZ74160.1| hydrogenase-4 component A [Escherichia coli RN587/1] gi|323935732|gb|EGB32046.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323941457|gb|EGB37640.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323946409|gb|EGB42437.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|323951069|gb|EGB46945.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323957077|gb|EGB52802.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] gi|323960628|gb|EGB56254.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323966858|gb|EGB62287.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|323971559|gb|EGB66792.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] gi|323978679|gb|EGB73761.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] gi|324017065|gb|EGB86284.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] gi|324111337|gb|EGC05319.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] gi|324119962|gb|EGC13840.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|326339216|gb|EGD63031.1| Electron transport protein HydN [Escherichia coli O157:H7 str. 1044] gi|326342901|gb|EGD66669.1| Electron transport protein HydN [Escherichia coli O157:H7 str. 1125] gi|327251432|gb|EGE63118.1| protein aegA domain protein [Escherichia coli STEC_7v] gi|330908744|gb|EGH37258.1| electron transport protein HydN [Escherichia coli AA86] gi|331036867|gb|EGI09091.1| electron transport protein HydN [Escherichia coli H736] gi|331042178|gb|EGI14320.1| electron transport protein HydN [Escherichia coli M605] gi|331053400|gb|EGI25429.1| electron transport protein HydN [Escherichia coli TA206] gi|331058195|gb|EGI30176.1| electron transport protein HydN [Escherichia coli TA143] gi|331063113|gb|EGI35026.1| electron transport protein HydN [Escherichia coli TA271] gi|331073515|gb|EGI44836.1| electron transport protein HydN [Escherichia coli H591] gi|331077940|gb|EGI49146.1| electron transport protein HydN [Escherichia coli H299] gi|332087432|gb|EGI92560.1| hydrogenase-4 component A [Shigella boydii 5216-82] gi|332092187|gb|EGI97265.1| hydrogenase-4 component A [Shigella boydii 3594-74] gi|333001052|gb|EGK20622.1| hydrogenase-4 component A [Shigella flexneri K-272] gi|333015445|gb|EGK34784.1| hydrogenase-4 component A [Shigella flexneri K-227] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|283786092|ref|YP_003365957.1| oxidoreductase [Citrobacter rodentium ICC168] gi|282949546|emb|CBG89161.1| oxidoreductase [Citrobacter rodentium ICC168] Length = 652 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CRHCEDAPCARSCPNGAISHLNDSVQVNQQKCIGCKSCVVACPFG 100 >gi|255524301|ref|ZP_05391259.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296185258|ref|ZP_06853668.1| protein HymB [Clostridium carboxidivorans P7] gi|255511984|gb|EET88266.1| NADH dehydrogenase (quinone) [Clostridium carboxidivorans P7] gi|296050092|gb|EFG89516.1| protein HymB [Clostridium carboxidivorans P7] Length = 626 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C +VCP E + I+ ++CI+CG C C +I Sbjct: 578 CIGC--TACTKVCPTKAISGEVKKAHVINKEKCINCGACSSTCKFSSI 623 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 1/43 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP +I P +CI C C CP AI + + Sbjct: 560 CPAG-VCTALLKYSIDPKKCIGCTACTKVCPTKAISGEVKKAH 601 >gi|227888249|ref|ZP_04006054.1| electron transport protein HydN [Escherichia coli 83972] gi|227834518|gb|EEJ44984.1| electron transport protein HydN [Escherichia coli 83972] gi|307554687|gb|ADN47462.1| electron transport protein HydN [Escherichia coli ABU 83972] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|146297119|ref|YP_001180890.1| thiamine pyrophosphate binding domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410695|gb|ABP67699.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 598 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 Y + E CI CK V CP E E+ + I C CG+C CP AIK Sbjct: 540 YRINEKCINCKACLNVTGCP--AISEDEDKNVFIDKTLCNGCGLCANFCPRMAIK 592 >gi|309784808|ref|ZP_07679441.1| protein aegA [Shigella dysenteriae 1617] gi|308927178|gb|EFP72652.1| protein aegA [Shigella dysenteriae 1617] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|302337663|ref|YP_003802869.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] gi|301634848|gb|ADK80275.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Spirochaeta smaragdinae DSM 11293] Length = 234 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 E C C C CPV EN ++ D CI CG CE CP Sbjct: 130 GETCKQCAEPYCANACPVQAISTDENTGARVVNTDICIGCGSCERACPFG 179 >gi|270263102|ref|ZP_06191372.1| hypothetical protein SOD_d01180 [Serratia odorifera 4Rx13] gi|270042790|gb|EFA15884.1| hypothetical protein SOD_d01180 [Serratia odorifera 4Rx13] Length = 198 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C+ C VCP + + + CI C C CP A++ T P + Sbjct: 76 CRQCEDAPCANVCPNGAISRQNGMVLVMQERCIGCKTCVVACPYGAMEVITRPVIRQ 132 >gi|224370949|ref|YP_002605113.1| ferredoxin (4Fe-4S iron-sulfur cluster binding protein) [Desulfobacterium autotrophicum HRM2] gi|223693666|gb|ACN16949.1| ferredoxin (4Fe-4S iron-sulfur cluster binding protein) [Desulfobacterium autotrophicum HRM2] Length = 361 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C C+ C++ C ++ G + + CI CG+C CPVDAI+ + +P Sbjct: 271 AVVDPEECTACE--TCLDRCQMNAIEIG-DAAVVDHARCIGCGLCVTTCPVDAIRLEEKP 327 >gi|242277841|ref|YP_002989970.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120735|gb|ACS78431.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 170 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 16/46 (34%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C CPV + I + C C C CP A Sbjct: 59 CRQCEDAPCAAACPVGAIGYNGKSVVIDAERCFGCKACLAACPFGA 104 >gi|170767182|ref|ZP_02901635.1| protein aegA [Escherichia albertii TW07627] gi|170123516|gb|EDS92447.1| protein aegA [Escherichia albertii TW07627] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|332344593|gb|AEE57927.1| hydrogenase-4 component A [Escherichia coli UMNK88] Length = 175 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|294083719|ref|YP_003550476.1| NADH-quinone oxidoreductase subunit I [Candidatus Puniceispirillum marinum IMCC1322] gi|292663291|gb|ADE38392.1| NADH-quinone oxidoreductase, chain I [Candidatus Puniceispirillum marinum IMCC1322] Length = 162 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 18/103 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 118 Query: 56 -----KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKM 93 + TE EL+ N A T +L + A+ Sbjct: 119 EGPNFEFATETREELYYDKNKLLANGDRWETEIARNLAADAEW 161 >gi|283836636|ref|ZP_06356377.1| cytochrome c nitrite reductase, Fe-S protein [Citrobacter youngae ATCC 29220] gi|291067370|gb|EFE05479.1| cytochrome c nitrite reductase, Fe-S protein [Citrobacter youngae ATCC 29220] Length = 223 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP + + N + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACPY 137 >gi|220904100|ref|YP_002479412.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868399|gb|ACL48734.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 290 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +++C C C+ CP E + D C C C CP I + + G Sbjct: 109 SDSCKHCDDAPCMRACPTGALVRTEVGGVYPQADICNGCASCVAACPFGVIARNEKSGHS 168 Query: 65 L 65 Sbjct: 169 H 169 >gi|204929696|ref|ZP_03220770.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321415|gb|EDZ06615.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 653 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|309786192|ref|ZP_07680820.1| hydrogenase-4 component A [Shigella dysenteriae 1617] gi|308925937|gb|EFP71416.1| hydrogenase-4 component A [Shigella dysenteriae 1617] Length = 164 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 10 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 60 >gi|114320829|ref|YP_742512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227223|gb|ABI57022.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 230 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP Y E + + I D+C+ C C CP A + D Sbjct: 71 SCMHCEDPVCVTVCPTGASYKREEDGIVLIDQDKCMGCNYCAWACPYGARELD 123 >gi|332998146|gb|EGK17750.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri VA-6] Length = 223 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCEHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|262275677|ref|ZP_06053486.1| tetrathionate reductase subunit B [Grimontia hollisae CIP 101886] gi|262219485|gb|EEY70801.1| tetrathionate reductase subunit B [Grimontia hollisae CIP 101886] Length = 255 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV Y+ E+ + + C+ C C CP DA Sbjct: 109 CNHCDNPPCVAVCPVQATYQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|261211946|ref|ZP_05926232.1| electron transport complex protein RnfB [Vibrio sp. RC341] gi|260838554|gb|EEX65205.1| electron transport complex protein RnfB [Vibrio sp. RC341] Length = 195 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G L + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|255319168|ref|ZP_05360386.1| electron transport complex, rnfaBcdge type, b subunit [Acinetobacter radioresistens SK82] gi|262379300|ref|ZP_06072456.1| NADH:ubiquinone oxidoreductase [Acinetobacter radioresistens SH164] gi|255303814|gb|EET83013.1| electron transport complex, rnfaBcdge type, b subunit [Acinetobacter radioresistens SK82] gi|262298757|gb|EEY86670.1| NADH:ubiquinone oxidoreductase [Acinetobacter radioresistens SH164] Length = 266 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C T C+ CPVD G+ + D C C +C P CPVD I Sbjct: 90 DECIGC--TKCISACPVDAIIGSGKLMHTVLTDLCTGCELCIPPCPVDCI 137 Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 86 VIREDECIGCTKCISACPVDAI 107 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 114 MHTVLTDLCTGCEL--CIPPCPVDCI 137 >gi|322419479|ref|YP_004198702.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320125866|gb|ADW13426.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 279 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C VCPV F + + CI C C CP K + Sbjct: 82 EMCMHCNEPACASVCPVGAFKKTKEGPVTYDAKRCIGCRFCMVACPFGVPKYE 134 >gi|224105397|ref|XP_002313797.1| predicted protein [Populus trichocarpa] gi|222850205|gb|EEE87752.1| predicted protein [Populus trichocarpa] Length = 222 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 162 CIYCGF--CQEACPVDAIVEGPNF 183 >gi|171186292|ref|YP_001795211.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935504|gb|ACB40765.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 232 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C+ T C+EVCP Y+ + + I D+CI C C CP Sbjct: 69 CNHCEKTPCLEVCPTQATYKTKEGIVLIDKDKCIGCRYCIMACPYG 114 >gi|197117961|ref|YP_002138388.1| formate dehydrogenase iron-sulfur subunit [Geobacter bemidjiensis Bem] gi|197087321|gb|ACH38592.1| formate dehydrogenase, iron-sulfur subunit [Geobacter bemidjiensis Bem] Length = 262 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ C C++VCP Y E + + ++CI C C CP + + D+ Sbjct: 79 QRCMHCGDAGCIKVCPSPGALYRTKEGSVVFNKEKCIACKYCVSACPFNIPRYDSND 135 >gi|89896196|ref|YP_519683.1| hypothetical protein DSY3450 [Desulfitobacterium hafniense Y51] gi|219668013|ref|YP_002458448.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335644|dbj|BAE85239.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538273|gb|ACL20012.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 246 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC----EPECPVDAIKPDTEP 61 E CI C CV CP++ + +I+ + C++CG C CP AI E Sbjct: 6 EKCIGCG--ICVSYCPMEAISVADKKASINQEMCVECGTCIRPRVVRCPTKAIYEPYEQ 62 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 16/23 (69%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 + I ++CI CG+C CP++AI Sbjct: 1 MLIDQEKCIGCGICVSYCPMEAI 23 >gi|300855183|ref|YP_003780167.1| Fe-S-cluster-containing hydrogenase component [Clostridium ljungdahlii DSM 13528] gi|300435298|gb|ADK15065.1| Fe-S-cluster-containing hydrogenase component [Clostridium ljungdahlii DSM 13528] Length = 190 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C + C VCPV EN + + + CI C +C CP A Sbjct: 59 CRQCDDSPCANVCPVGAIVHQENKVVVKTELCIGCKICMLACPFGA 104 >gi|291286605|ref|YP_003503421.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290883765|gb|ADD67465.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 248 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C + CVE CP+ Y+ E + + ++ + CI CG C+ CP DA + P Sbjct: 104 ISLACNHCTNPACVEACPMGIIYKEEEYGLVLVNNETCISCGKCKEACPWDAPQF-YAPD 162 Query: 63 LELW 66 + Sbjct: 163 FSQY 166 >gi|209921900|ref|YP_002295979.1| thiosulfate reductase iron-sulfur subunit [Escherichia coli SE11] gi|209915393|dbj|BAG80464.1| thiosulfate reductase iron-sulfur subunit [Escherichia coli SE11] Length = 192 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP + EN + I CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASHRDENGIVQIDKSRCIGCDYCVAACPF 108 >gi|188587655|ref|YP_001920981.1| nitroreductase family protein fused to ferredoxin domain [Clostridium botulinum E3 str. Alaska E43] gi|188497936|gb|ACD51072.1| nitroreductase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 273 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V E CI CK C+ CPV + I + CI CG C CP A+ D Sbjct: 1 MFEVNKEKCISCKQ--CINDCPVSDILLIDGKANIKNESCIKCGHCIAICPTKAVSTDD 57 >gi|167769723|ref|ZP_02441776.1| hypothetical protein ANACOL_01057 [Anaerotruncus colihominis DSM 17241] gi|167668084|gb|EDS12214.1| hypothetical protein ANACOL_01057 [Anaerotruncus colihominis DSM 17241] Length = 177 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + C C C + CP G I CI CG+C CP A+ Sbjct: 52 IPVMCQHCSDASCAKACPRGAIKRGAAGEQLIDDALCIGCGLCVRACPFGAVY 104 >gi|91211799|ref|YP_541785.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UTI89] gi|117624664|ref|YP_853577.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli APEC O1] gi|218559403|ref|YP_002392316.1| oxidoreductase Fe-S binding subunit [Escherichia coli S88] gi|237704983|ref|ZP_04535464.1| AegA protein [Escherichia sp. 3_2_53FAA] gi|91073373|gb|ABE08254.1| putative oxidoreductase Fe-S subunit [Escherichia coli UTI89] gi|115513788|gb|ABJ01863.1| putative oxidoreductase Fe-S subunit [Escherichia coli APEC O1] gi|218366172|emb|CAR03918.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia coli S88] gi|226901349|gb|EEH87608.1| AegA protein [Escherichia sp. 3_2_53FAA] gi|307625970|gb|ADN70274.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli UM146] gi|323949500|gb|EGB45388.1| glutamate synthase [Escherichia coli H252] gi|323955716|gb|EGB51474.1| glutamate synthase [Escherichia coli H263] Length = 659 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|51893469|ref|YP_076160.1| anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] gi|51857158|dbj|BAD41316.1| anaerobic dimethyl sulfoxide reductase subunit B [Symbiobacterium thermophilum IAM 14863] Length = 198 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C C CV VCP Y +N L ++ D+C+ C C CP DA + + E G Sbjct: 64 SCNHCADPACVYVCPTGAMYKRSDNGLVLVNQDDCVGCQSCVWACPYDAPQYNPEVG 120 >gi|325280681|ref|YP_004253223.1| 4Fe-4S iron-sulfur binding protein (ferredoxin) [Odoribacter splanchnicus DSM 20712] gi|324312490|gb|ADY33043.1| 4Fe-4S iron-sulfur binding protein (ferredoxin) [Odoribacter splanchnicus DSM 20712] Length = 273 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE----CIDCGVCEPECPVDA 54 V T+ CI C C +VCP+ HP E CI C C +CPV A Sbjct: 199 VTTDACIDC--RRCAKVCPMGAIRLD------HPSEVSGICIKCNACVKQCPVHA 245 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE-LWLKINS 71 D CIDC C CP+ AI+ D + + +K N+ Sbjct: 202 DACIDCRRCAKVCPMGAIRLDHPSEVSGICIKCNA 236 >gi|291085186|ref|ZP_06570972.1| thiosulfate reductase electron transport protein phsb [Citrobacter youngae ATCC 29220] gi|291072235|gb|EFE10344.1| thiosulfate reductase electron transport protein phsb [Citrobacter youngae ATCC 29220] Length = 198 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV VCP + EN + + CI C C CP Sbjct: 69 SCQHCEDAPCVSVCPTGASFRDENGVVQVDKSRCIGCDYCVAACPF 114 >gi|218886706|ref|YP_002436027.1| dimethylsulfoxide reductase, chain B [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757660|gb|ACL08559.1| dimethylsulfoxide reductase, chain B [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 205 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ +C C+ CV+ CP ++ +N + + P +C+ C C CP A + Sbjct: 60 SYYLSVSCNHCEDPICVQSCPTTAMHQDKNGIVSVDPKKCVGCKYCSWGCPYGAPQYSER 119 Query: 61 PG 62 G Sbjct: 120 LG 121 >gi|325829783|ref|ZP_08163241.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella sp. HGA1] gi|325487950|gb|EGC90387.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella sp. HGA1] Length = 267 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CP N I D CI CG C CP AI Sbjct: 217 CIGC--QKCAKTCPTQSITVENNLARIDTDTCIGCGTCIEVCPTHAI 261 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 16/50 (32%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + DC E CP D I C CG C CP I + Sbjct: 142 GYGDCAEACPFDAIVVENGVARIDTAACTGCGTCAKICPRGIISMVDQAS 191 >gi|322613782|gb|EFY10721.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619475|gb|EFY16351.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624980|gb|EFY21809.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629577|gb|EFY26353.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633993|gb|EFY30730.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635569|gb|EFY32280.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639936|gb|EFY36610.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644377|gb|EFY40918.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652096|gb|EFY48458.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655259|gb|EFY51568.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658306|gb|EFY54572.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664306|gb|EFY60503.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669474|gb|EFY65623.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673201|gb|EFY69307.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676592|gb|EFY72660.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683343|gb|EFY79357.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685771|gb|EFY81764.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192551|gb|EFZ77780.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199597|gb|EFZ84688.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201245|gb|EFZ86313.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208075|gb|EFZ93020.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210202|gb|EFZ95103.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217068|gb|EGA01790.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220593|gb|EGA05042.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225488|gb|EGA09719.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229243|gb|EGA13367.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235442|gb|EGA19526.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237372|gb|EGA21435.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245127|gb|EGA29128.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248830|gb|EGA32756.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253117|gb|EGA36949.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255916|gb|EGA39661.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260966|gb|EGA44563.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266402|gb|EGA49890.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269767|gb|EGA53217.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 653 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|320176287|gb|EFW51348.1| putative oxidoreductase Fe-S binding subunit [Shigella dysenteriae CDC 74-1112] Length = 606 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 3 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 47 >gi|260893278|ref|YP_003239375.1| methyl-viologen-reducing hydrogenase delta subunit [Ammonifex degensii KC4] gi|260865419|gb|ACX52525.1| methyl-viologen-reducing hydrogenase delta subunit [Ammonifex degensii KC4] Length = 810 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 20/80 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDC---FYEG---------------ENFLAIHPDECIDCG 44 +V ++ C+ C C +CPV+ F G I P+ C CG Sbjct: 246 FVNSQKCVECG--RCAAICPVEVENDFDMGISRRKAAYKPHPMALPPGYTIDPNSCTRCG 303 Query: 45 VCEPECPVDAIKPDTEPGLE 64 C CP AI P Sbjct: 304 ACVGACPAQAIDLQAAPQER 323 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 V + C C C +VCP E+ P C CG+C CP AI+ Sbjct: 607 VDPQKCSGCGF--CAKVCPHGVIQRREDGTYYTSPAFCQGCGLCTTACPTGAIR 658 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIK 56 + + + P +C CG C CP I+ Sbjct: 602 DYYAEVDPQKCSGCGFCAKVCPHGVIQ 628 >gi|258513534|ref|YP_003189756.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777239|gb|ACV61133.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 443 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+CV+ CP + E I + CIDCG C CP A Sbjct: 13 DKCKGC--TNCVKRCPTEAIRVREGRALIIEERCIDCGECIKICPNRA 58 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + D+C C C CP +AI+ Sbjct: 10 LDEDKCKGCTNCVKRCPTEAIR 31 >gi|320180448|gb|EFW55379.1| putative oxidoreductase Fe-S binding subunit [Shigella boydii ATCC 9905] Length = 606 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 3 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 47 >gi|311278308|ref|YP_003940539.1| formate hydrogenlyase subunit 2 [Enterobacter cloacae SCF1] gi|308747503|gb|ADO47255.1| formate hydrogenlyase subunit 2 [Enterobacter cloacae SCF1] Length = 202 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAGVCPVNAITRIDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|301060589|ref|ZP_07201424.1| putative NAD-dependent formate dehydrogenase, beta subunit [delta proteobacterium NaphS2] gi|300445292|gb|EFK09222.1| putative NAD-dependent formate dehydrogenase, beta subunit [delta proteobacterium NaphS2] Length = 584 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + ENC C C + CPV+ E + + + ++CI C C C +AI+ Sbjct: 533 FIEENCTKCGQ--CFKACPVEAISWEKKQYPVLDKEKCIKCKTCIDACNFEAIQ 584 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 1/43 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 VCP + C CG C CPV+AI + + Sbjct: 518 HVCP-SRVCTALIKFEFIEENCTKCGQCFKACPVEAISWEKKQ 559 >gi|296132872|ref|YP_003640119.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola sp. JR] gi|296031450|gb|ADG82218.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermincola potens JR] Length = 54 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T+ C+ C C++ CP EG+ + D C DCG C CP AI + Sbjct: 1 MAYKITDECVACG--TCLDTCPNGAIEEGD--IYKITDACADCGACAEACPTGAIVEE 54 >gi|269139191|ref|YP_003295892.1| hydrogen sulfide production: iron- sulfur subunit; electron transfer [Edwardsiella tarda EIB202] gi|267984852|gb|ACY84681.1| hydrogen sulfide production: iron- sulfur subunit; electron transfer [Edwardsiella tarda EIB202] gi|304559108|gb|ADM41772.1| Thiosulfate reductase electron transport protein PhsB [Edwardsiella tarda FL6-60] Length = 190 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C C CV VCP + +N + + CI C C CP D G Sbjct: 61 SCQHCADAPCVSVCPTGASFRDDNGIVQVDKSRCIGCDYCVAACPFHVRYLDPRSG 116 >gi|257792587|ref|YP_003183193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488875|ref|ZP_07947405.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832779|ref|ZP_08165542.1| electron transport protein HydN [Eggerthella sp. HGA1] gi|257476484|gb|ACV56804.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316911949|gb|EFV33528.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485918|gb|EGC88379.1| electron transport protein HydN [Eggerthella sp. HGA1] Length = 208 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 21/52 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C+ VCP + + L + C C +C CP A+ P Sbjct: 51 CHQCEGAPCMTVCPEGAIVQERDRLHVDESRCTGCLLCALVCPFGAVYPSAP 102 >gi|260588669|ref|ZP_05854582.1| iron-sulfur cluster-binding protein [Blautia hansenii DSM 20583] gi|331081982|ref|ZP_08331110.1| hypothetical protein HMPREF0992_00034 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541144|gb|EEX21713.1| iron-sulfur cluster-binding protein [Blautia hansenii DSM 20583] gi|330405577|gb|EGG85107.1| hypothetical protein HMPREF0992_00034 [Lachnospiraceae bacterium 6_1_63FAA] Length = 374 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V C+ C C ++C D I+ D+C+ CG C CP DAI ++ Sbjct: 190 PHVDQNLCVGC--QMCAKICAHDAPEFENKKATINHDKCVGCGRCIGVCPKDAILSASDE 247 Query: 62 GLELWLKINSEYAT 75 E+ +N + A Sbjct: 248 SNEI---LNCKIAE 258 >gi|218781106|ref|YP_002432424.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762490|gb|ACL04956.1| Predicted heterodisulfide reductase/ glutamate synthase fusion protein HdrL [Desulfatibacillum alkenivorans AK-01] Length = 1482 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 2 TYVVTENCILCKHTDCVEVCP--VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V + C C CV CP V E + I P C CGVC ECP AI+ + Sbjct: 1408 AVVDQDKCASCL--ICVRSCPFGVPRIDETGKSI-IDPALCQGCGVCASECPAKAIRLNW 1464 Query: 60 EPGLE 64 + Sbjct: 1465 YEDEQ 1469 >gi|320354001|ref|YP_004195340.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122503|gb|ADW18049.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 266 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C C V + HPD C+ C C CP + K + + Sbjct: 73 CLHCVDPACASSCLVGALRRTPEGPVVYHPDLCVGCRYCMVACPFNIPKYEWDKSF 128 >gi|298676082|ref|YP_003727832.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298289070|gb|ADI75036.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalobium evestigatum Z-7303] Length = 58 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +++ENC+ C CV+ CPV+ +GEN + EC DCG C CP +AI+ + Sbjct: 3 AVIISENCVGC--ATCVDECPVEAISLDGENIAVVDEGECSDCGECVDVCPTEAIEIE 58 >gi|317153423|ref|YP_004121471.1| NIL domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943674|gb|ADU62725.1| NIL domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 146 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E+CI C C +CP D G + D+C CG+C CPV A+ D + Sbjct: 89 ESCIHCGV--CTAMCPTDALLLDPGTRLVVFDVDKCSACGMCTRVCPVKAMTLDLKDD 144 Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 36 HPDECIDCGVCEPECPVDAIKPD 58 + + CI CGVC CP DA+ D Sbjct: 87 NEESCIHCGVCTAMCPTDALLLD 109 >gi|291613334|ref|YP_003523491.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] gi|291583446|gb|ADE11104.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Sideroxydans lithotrophicus ES-1] Length = 430 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 13 KHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV CP G+ L I+P CI G CE CP DAIK Sbjct: 59 GAGSCVAACPEGALGMINGKGTL-INPTVCIGHGACEAACPHDAIK 103 >gi|224582989|ref|YP_002636787.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467516|gb|ACN45346.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 653 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|197251269|ref|YP_002147431.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214972|gb|ACH52369.1| protein AegA [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 653 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|168235874|ref|ZP_02660932.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734890|ref|YP_002115795.1| electron transport protein HydN [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710392|gb|ACF89613.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290742|gb|EDY30096.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 181 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 19/46 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + F+ + + CI C C CP A Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGA 103 >gi|268576410|ref|XP_002643185.1| Hypothetical protein CBG24154 [Caenorhabditis briggsae] gi|187040443|emb|CAP20828.1| hypothetical protein CBG_24154 [Caenorhabditis briggsae AF16] Length = 212 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 167 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 152 CIYCGL--CQEACPVDAIVEGPNFEY 175 Score = 37.4 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 111 ERCIACKLCEAICPAQAITIEAE 133 >gi|325830302|ref|ZP_08163759.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|325487769|gb|EGC90207.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 216 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 +Y V+ C C CV VCP + ++ E ++++ CI CG C CP A + D Sbjct: 60 SYNVSVACNHCDDPVCVRVCPTEAMHKDEQTGLVSVNDRHCIGCGYCHLSCPYSAPRVD 118 >gi|323977355|gb|EGB72441.1| glutamate synthase [Escherichia coli TW10509] Length = 659 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|323965964|gb|EGB61407.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327251228|gb|EGE62921.1| protein aegA domain protein [Escherichia coli STEC_7v] Length = 157 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|308271190|emb|CBX27799.1| hypothetical protein N47_C18570 [uncultured Desulfobacterium sp.] Length = 368 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C C+ C I +CI CG C C +AI+ + ++L+ Sbjct: 195 CIGCGD--CISHCSQQAISLVNEKAVIDSTKCIGCGECILICVNEAIQIKWNQAIPVFLE 252 >gi|293392063|ref|ZP_06636397.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952597|gb|EFE02716.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D7S-1] Length = 199 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C VCPV + + ++ CI C +C CP AI Sbjct: 51 CRHCDDSPCATVCPVHAITHEGDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|251778159|ref|ZP_04821079.1| nitroreductase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082474|gb|EES48364.1| nitroreductase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 273 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V E CI CK C+ CPV E I + CI CG C CP A+ D Sbjct: 1 MFEVNKEKCISCKQ--CINDCPVSDILLIEGKANIKNESCIKCGHCIAICPTKAVSTDD 57 >gi|255658479|ref|ZP_05403888.1| iron-sulfur cluster-binding protein [Mitsuokella multacida DSM 20544] gi|260849277|gb|EEX69284.1| iron-sulfur cluster-binding protein [Mitsuokella multacida DSM 20544] Length = 374 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E C C C + C D N IH D C CG C C DAI+ + Sbjct: 192 VNEELCRGC--RKCAKECGSDAITYENNKAVIHEDLCKGCGRCIGACSYDAIRNE 244 >gi|158320132|ref|YP_001512639.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140331|gb|ABW18643.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 226 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVD--CFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 ++ C C CV CP++ Y+ +N + +H + CI C CE CP I + Sbjct: 54 ISTLCNHCDDAPCVNACPLNPKAMYKSDNGITMHNHEACIGCRACEKACPYSVISFNETE 113 Query: 62 GLELW 66 W Sbjct: 114 PFGEW 118 >gi|50120807|ref|YP_049974.1| nitrite reductase complex component [Pectobacterium atrosepticum SCRI1043] gi|49611333|emb|CAG74780.1| nitrite reductase complex component [Pectobacterium atrosepticum SCRI1043] Length = 223 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C+++ CV+VCP F + + + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCENSPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYQVRFIHPQTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|317490042|ref|ZP_07948533.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316910883|gb|EFV32501.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 267 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CP N I D CI CG C CP AI Sbjct: 217 CIGC--QKCAKTCPTQSITVENNLARIDTDTCIGCGTCIEVCPTHAI 261 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 16/50 (32%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + DC E CP D I C CG C CP I + Sbjct: 142 GYGDCAEACPFDAIVVENGVARIDTAACTGCGTCAKICPRGIISMVDQAS 191 >gi|308463017|ref|XP_003093787.1| hypothetical protein CRE_24782 [Caenorhabditis remanei] gi|308249393|gb|EFO93345.1| hypothetical protein CRE_24782 [Caenorhabditis remanei] Length = 212 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 167 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 152 CIYCGL--CQEACPVDAIVEGPNFEY 175 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 111 ERCIACKLCEAICPAQAITIEAE 133 >gi|239816784|ref|YP_002945694.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] gi|239803361|gb|ACS20428.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Variovorax paradoxus S110] Length = 244 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D E Sbjct: 100 SCLHCEDPPCVPVCPTGASYKRKEDGIVLVDYDKCIGCKYCAWACPYGARELDEE 154 >gi|291288005|ref|YP_003504821.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885165|gb|ADD68865.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 203 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C CVEVCP + + + ECI C C CP A + E W Sbjct: 57 CNHCDDAPCVEVCPTGASKKLADGTVQVTASECIGCQACMEACPYGARYFNEEEKPTYWS 116 Query: 68 K 68 + Sbjct: 117 E 117 >gi|168466778|ref|ZP_02700632.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630777|gb|EDX49369.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 653 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|149246748|ref|XP_001527799.1| NADH-quinone oxidoreductase chain I [Lodderomyces elongisporus NRRL YB-4239] gi|146447753|gb|EDK42141.1| NADH-quinone oxidoreductase chain I [Lodderomyces elongisporus NRRL YB-4239] Length = 246 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 145 ERCIACKL--CEAICPAQAITIEAEERADGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 201 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 126 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERAD 171 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 186 CIYCGY--CQESCPVDAIVESPNVEY 209 >gi|147678983|ref|YP_001213198.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] gi|146275080|dbj|BAF60829.1| NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit [Pelotomaculum thermopropionicum SI] Length = 617 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ + C C C CP E + I ++CI CG C +C +AI Sbjct: 562 YVIDQEKCTGCG--ACARACPAGAIAGEKKQPHVIDVEKCIKCGSCIQKCKFEAIY 615 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I ++C CG C CP AI + + Sbjct: 562 YVIDQEKCTGCGACARACPAGAIAGEKKQPH 592 >gi|15616781|ref|NP_239993.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11133970|sp|P57259|NUOI_BUCAI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|25282723|pir||G84948 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain I [imported] - Buchnera sp. (strain APS) gi|10038844|dbj|BAB12879.1| NADH dehydrogenase I chain I [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 180 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVDCISLQKSEKTDGRWYPKFFRINFSRCIFCGLCEEACPTAAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LMPDFELSDF 125 >gi|331001428|ref|ZP_08325048.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329568310|gb|EGG50121.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 238 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C C+ VCPV E + + +CI CG C CP DA + + E Sbjct: 105 CNHCSEPACIPVCPVKAISKEAKYGAVRVDSSKCISCGACRAACPWDAPQYYKDLQAE 162 >gi|325294618|ref|YP_004281132.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065066|gb|ADY73073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 181 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C C+EVCP E + + P +CI C +C CP I + Sbjct: 60 CRHCNPAPCMEVCPTYAISRDEKTESVLVDPAKCIACSMCAIACPFGVITFE 111 >gi|170754223|ref|YP_001781834.1| iron-sulfur binding protein [Clostridium botulinum B1 str. Okra] gi|169119435|gb|ACA43271.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum B1 str. Okra] Length = 281 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T+C VC D L I P C CG C CP +AIK + E + + Sbjct: 65 DICIKC--TECELVCKFDAIKN----LKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G +I D CI C CE C DAIK Sbjct: 56 GGKKASIDEDICIKCTECELVCKFDAIK 83 >gi|186476850|ref|YP_001858320.1| ferredoxin [Burkholderia phymatum STM815] gi|184193309|gb|ACC71274.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia phymatum STM815] Length = 291 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCIAMIPV 137 Query: 58 -DTEPGLELWLKINSEYATQ 76 + G + W + + A + Sbjct: 138 TGDKTGWDAWTQSQANAARE 157 >gi|33594349|ref|NP_881993.1| ferredoxin [Bordetella pertussis Tohama I] gi|33595531|ref|NP_883174.1| ferredoxin [Bordetella parapertussis 12822] gi|33599929|ref|NP_887489.1| ferredoxin [Bordetella bronchiseptica RB50] gi|33564424|emb|CAE43733.1| ferredoxin [Bordetella pertussis Tohama I] gi|33565609|emb|CAE40255.1| ferredoxin [Bordetella parapertussis] gi|33567526|emb|CAE31439.1| ferredoxin [Bordetella bronchiseptica RB50] gi|332383760|gb|AEE68607.1| ferredoxin [Bordetella pertussis CS] Length = 83 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +TE CI C C CP + G ++ I PD C +C C+ CPV+ Sbjct: 1 MALKITEECINCDV--CEPQCPNEAISMGADYYVIDPDRCTECVGHHDEPQCKVVCPVEC 58 Query: 55 IK--PDTEPGLEL 65 I+ P + G E Sbjct: 59 IELHPQWQEGQEQ 71 >gi|317493927|ref|ZP_07952344.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918254|gb|EFV39596.1| 4Fe-4S binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 204 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C +VCPV+ + + ++ C+ C +C CP AI Sbjct: 51 CHQCEDAPCAQVCPVNAITHTNDSIQLNESLCVSCKLCGIACPFGAI 97 >gi|219681536|ref|YP_002467921.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682092|ref|YP_002468476.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471217|ref|ZP_05635216.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219621825|gb|ACL29981.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624379|gb|ACL30534.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085903|gb|ADP65985.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086476|gb|ADP66557.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087057|gb|ADP67137.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087614|gb|ADP67693.1| NADH dehydrogenase subunit I [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 180 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVDCISLQKSEKTDGRWYPKFFRINFSRCIFCGLCEEACPTAAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LMPDFELSDF 125 >gi|168261487|ref|ZP_02683460.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349434|gb|EDZ36065.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|119094136|gb|ABL60966.1| iron-sulfur cluster-binding protein [uncultured marine bacterium HF10_19P19] Length = 669 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 21/45 (46%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C++VCP + +AI P C CG+C CP A + P Sbjct: 293 CLDVCPAGAIVVAGDHVAIDPAVCGGCGMCGAVCPSGAAQTAFPP 337 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 T+ C +C CV CP + + L D C+ CG+C CP I Sbjct: 524 TDKCTICL--SCVGACPAGALQDNPDAPQLLFREDACLQCGICVATCPEKVI 573 Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D+C C C CP A++ + + L+ + Sbjct: 522 IDTDKCTICLSCVGACPAGALQDNPDAPQLLFRE 555 >gi|110678320|ref|YP_681327.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Roseobacter denitrificans OCh 114] gi|109454436|gb|ABG30641.1| 4Fe-4S binding domain protein [Roseobacter denitrificans OCh 114] Length = 252 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQAEG 137 >gi|299143765|ref|ZP_07036845.1| iron-sulfur cluster-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518250|gb|EFI41989.1| iron-sulfur cluster-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 316 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI CK C + CP D + +N I +CI+CG+C +CP AI + +E + Sbjct: 217 CIACKL--CEKNCPKDAIHVVDNLARIDYTKCINCGICVSKCPTGAIFCEYPERVEKMKE 274 Query: 69 INSEYATQ 76 A + Sbjct: 275 RQRLEAEK 282 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 CV VC D + + + ++C+ C C CP Sbjct: 144 VGGGTCVTVCEFDAIHIVDGVAKVDKEKCVACKKCIEICP 183 >gi|291547662|emb|CBL20770.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Ruminococcus sp. SR1/5] Length = 287 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + CI C C + C + ++ L I ++C CG C CPVDA Sbjct: 164 DACIHCGV--CEKACRENAISFEDDKLVIDTEKCNYCGRCAKSCPVDA 209 Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D CI CGVCE C +AI + + Sbjct: 164 DACIHCGVCEKACRENAISFEDD 186 >gi|261868396|ref|YP_003256318.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413728|gb|ACX83099.1| electron transport protein HydN [Aggregatibacter actinomycetemcomitans D11S-1] Length = 199 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C VCPV + + ++ CI C +C CP AI Sbjct: 51 CRHCDDSPCATVCPVHAITHEGDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|238878682|gb|EEQ42320.1| NADH-ubiquinone oxidoreductase subunit 8 [Candida albicans WO-1] Length = 244 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 143 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 199 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + E Sbjct: 124 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEE 166 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 184 CIYCGY--CQESCPVDAIVETPNVEY 207 >gi|298530704|ref|ZP_07018106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510078|gb|EFI33982.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 367 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C C++VC + + + P++C+ C C C A++ + E +L+ Sbjct: 194 CQGCGL--CMQVCASGALTLVDEKVRMDPEKCVGCAACILVCKTGALQINWETEGNAFLE 251 Query: 69 INSEYATQWPNITTKKE 85 EY+ ++ KK+ Sbjct: 252 RMMEYSAA--VLSRKKD 266 >gi|298530556|ref|ZP_07017958.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509930|gb|EFI33834.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 247 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C + CV CP + E E + I+ D CI CG C CP A Sbjct: 61 CMHCDNPTCVHACPSGATYKEEETGIVQINKDMCIGCGNCVVACPYSA 108 >gi|169599789|ref|XP_001793317.1| hypothetical protein SNOG_02720 [Phaeosphaeria nodorum SN15] gi|160705324|gb|EAT89451.2| hypothetical protein SNOG_02720 [Phaeosphaeria nodorum SN15] Length = 230 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 187 EGP----------NAEYATE 196 >gi|119473031|ref|ZP_01614853.1| electron transport complex protein RnfB [Alteromonadales bacterium TW-7] gi|119444609|gb|EAW25921.1| electron transport complex protein RnfB [Alteromonadales bacterium TW-7] Length = 184 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|68464733|ref|XP_723444.1| potential mitochondrial Complex I, NUIM_23kd subunit [Candida albicans SC5314] gi|68465112|ref|XP_723255.1| potential mitochondrial Complex I, NUIM_23kd subunit [Candida albicans SC5314] gi|46445282|gb|EAL04551.1| potential mitochondrial Complex I, NUIM_23kd subunit [Candida albicans SC5314] gi|46445478|gb|EAL04746.1| potential mitochondrial Complex I, NUIM_23kd subunit [Candida albicans SC5314] Length = 246 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 145 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 201 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + E Sbjct: 126 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEE 168 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 186 CIYCGY--CQESCPVDAIVETPNVEY 209 >gi|304413378|ref|ZP_07394851.1| NADH:ubiquinone oxidoreductase, chain I [Candidatus Regiella insecticola LSR1] gi|304284221|gb|EFL92614.1| NADH:ubiquinone oxidoreductase, chain I [Candidatus Regiella insecticola LSR1] Length = 183 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 61 ERCVACNL--CAAVCPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTLAIQ 118 Query: 57 PDTEPGLELW 66 + + + Sbjct: 119 LTPDFEMGEF 128 >gi|296104102|ref|YP_003614248.1| putative oxidoreductase Fe-S binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058561|gb|ADF63299.1| putative oxidoreductase Fe-S binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 658 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 21/45 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C++ C + CP + ++ + ++ +CI C C CP Sbjct: 56 CHHCENAPCAQSCPNGAISKCDDSVQVNQQKCIGCKACVVACPFG 100 >gi|317053381|ref|YP_004119148.1| glutamate synthase, small subunit [Pantoea sp. At-9b] gi|316953120|gb|ADU72592.1| glutamate synthase, small subunit [Pantoea sp. At-9b] Length = 659 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + + CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAINRIDDSVQVDQQLCIGCKSCVIACPFG 100 >gi|254487223|ref|ZP_05100428.1| 4Fe-4S binding domain protein [Roseobacter sp. GAI101] gi|214044092|gb|EEB84730.1| 4Fe-4S binding domain protein [Roseobacter sp. GAI101] Length = 221 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D Sbjct: 54 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELD 106 >gi|323975014|gb|EGB70123.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 157 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|308152250|emb|CBI83544.1| NUIM (TYKY) subunit of mitochondrial NADH:ubiquinone oxidoreductase (complex I) [Pichia pastoris] gi|328353143|emb|CCA39541.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Pichia pastoris CBS 7435] Length = 222 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 121 ERCIACKL--CEAVCPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIV 178 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 +T N EYAT+ + K++ L + K + Sbjct: 179 -ETP---------NVEYATETREELLYNKEKLLANGDKWE 208 >gi|261247679|emb|CBG25506.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|257790458|ref|YP_003181064.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella lenta DSM 2243] gi|257474355|gb|ACV54675.1| electron transport complex, RnfABCDGE type, B subunit [Eggerthella lenta DSM 2243] Length = 267 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C + CP N I D CI CG C CP AI Sbjct: 217 CIGC--QKCAKTCPTQSITVENNLARIDTDTCIGCGTCIEVCPTHAI 261 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 16/50 (32%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + DC E CP D I C CG C CP I + Sbjct: 142 GYGDCAEACPFDAIVVENGVARIDTAACTGCGTCAKICPRGIISMVDQAS 191 >gi|226941414|ref|YP_002796488.1| DmsB [Laribacter hongkongensis HLHK9] gi|226716341|gb|ACO75479.1| DmsB [Laribacter hongkongensis HLHK9] Length = 204 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ +C C C +VCP + N + CI C C+ CP A + + + Sbjct: 59 SYYLSVSCNHCADPACTKVCPTGAMAKDANGFVAVDDAVCIGCKSCQMACPYGAPQYNAD 118 Query: 61 PG 62 G Sbjct: 119 TG 120 >gi|200387321|ref|ZP_03213933.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604419|gb|EDZ02964.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|168232025|ref|ZP_02657083.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470701|ref|ZP_03076685.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457065|gb|EDX45904.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333637|gb|EDZ20401.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|56412638|ref|YP_149713.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361573|ref|YP_002141209.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126895|gb|AAV76401.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093049|emb|CAR58488.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|16765799|ref|NP_461414.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991782|ref|ZP_02572881.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197263682|ref|ZP_03163756.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16421020|gb|AAL21373.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197241937|gb|EDY24557.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329923|gb|EDZ16687.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267994588|gb|ACY89473.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159031|emb|CBW18544.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913467|dbj|BAJ37441.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323130809|gb|ADX18239.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989407|gb|AEF08390.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|115352416|ref|YP_774255.1| ferredoxin [Burkholderia ambifaria AMMD] gi|115282404|gb|ABI87921.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia ambifaria AMMD] Length = 339 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 112 AFIDESLCIGC--TLCMQACPVDAIVGAPKQMHTIVESLCTGCDLCVPPCPVDCIAMVPV 169 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 170 TGERTGWDAWSQQQADAARE 189 >gi|332534029|ref|ZP_08409878.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis ANT/505] gi|332036466|gb|EGI72934.1| electron transport complex protein RnfB [Pseudoalteromonas haloplanktis ANT/505] Length = 184 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|260779356|ref|ZP_05888248.1| electron transport complex protein RnfB [Vibrio coralliilyticus ATCC BAA-450] gi|260605520|gb|EEX31815.1| electron transport complex protein RnfB [Vibrio coralliilyticus ATCC BAA-450] Length = 194 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|161612772|ref|YP_001586737.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362136|gb|ABX65904.1| hypothetical protein SPAB_00471 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|149912662|ref|ZP_01901196.1| iron-sulfur cluster-binding protein [Roseobacter sp. AzwK-3b] gi|149813068|gb|EDM72894.1| iron-sulfur cluster-binding protein [Roseobacter sp. AzwK-3b] Length = 259 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDAAEG 137 >gi|119475395|ref|ZP_01615748.1| ferredoxin [marine gamma proteobacterium HTCC2143] gi|119451598|gb|EAW32831.1| ferredoxin [marine gamma proteobacterium HTCC2143] Length = 85 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C VCP + Y+G+ I P C +C C+ CPVD Sbjct: 1 MSLIITDECINCDV--CEPVCPNEAIYQGDEIYEIDPALCTECVGHFDEPQCQTVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P E L++ S+Y Sbjct: 59 I-PKDPNRQESQLQLLSKY 76 >gi|78048263|ref|YP_364438.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036693|emb|CAJ24384.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 154 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + E C+ C C CP GE I P C +C C CPV+ Sbjct: 61 MSLKINELCVNCDV--CEPACPNHAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVEC 118 Query: 55 IKPD--TEPGLELWLKINSEYATQWPNITTKKESLP 88 I PD + L + P + ++ P Sbjct: 119 IDPDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP 154 >gi|332999468|gb|EGK19053.1| hydrogenase-4 component A [Shigella flexneri VA-6] Length = 203 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|320185160|gb|EFW59940.1| putative oxidoreductase Fe-S binding subunit [Shigella flexneri CDC 796-83] Length = 532 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 77 >gi|303256812|ref|ZP_07342826.1| molybdopterin oxidoreductase [Burkholderiales bacterium 1_1_47] gi|302860303|gb|EFL83380.1| molybdopterin oxidoreductase [Burkholderiales bacterium 1_1_47] Length = 253 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPV 52 C C++ CV+VCP + + +H DE CI C +C+ CP Sbjct: 62 CNHCENPQCVKVCPTGAMFISPEGVVLHNDEACIGCRLCQNACPY 106 >gi|194443862|ref|YP_002041738.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194402525|gb|ACF62747.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|168243251|ref|ZP_02668183.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447960|ref|YP_002046542.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194406264|gb|ACF66483.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337676|gb|EDZ24440.1| glutamate synthase, small subunit subfamily [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|172061288|ref|YP_001808940.1| ferredoxin [Burkholderia ambifaria MC40-6] gi|171993805|gb|ACB64724.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia ambifaria MC40-6] Length = 341 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 112 AFIDESLCIGC--TLCMQACPVDAIVGAPKQMHTIVESLCTGCDLCVPPCPVDCIAMVPV 169 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 170 TGERTGWDAWSQQQADAARE 189 >gi|104780426|ref|YP_606924.1| lectron transport complex protein RnfB [Pseudomonas entomophila L48] gi|95109413|emb|CAK14113.1| putative lectron transport complex protein RnfB [Pseudomonas entomophila L48] Length = 254 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + EC C +C P CPVD I Sbjct: 80 ECIGC--TKCIQACPVDAIVGASKLMHTVIAIECTGCDLCLPACPVDCI 126 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I ECI C C CPVDAI Sbjct: 76 IREAECIGCTKCIQACPVDAI 96 >gi|49082640|gb|AAT50720.1| PA3490 [synthetic construct] Length = 189 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ + Sbjct: 106 AYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMREI 163 Query: 60 EPGLELW 66 + W Sbjct: 164 PDDVRHW 170 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 P+D E I ECI C C CPVDAI Sbjct: 94 PLDAAEETPPRVAYIREAECIGCTKCIQACPVDAI 128 >gi|332799826|ref|YP_004461325.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] gi|332697561|gb|AEE92018.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] Length = 597 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + C C C++VCP I D+CI C C CP AI Sbjct: 544 IIADKCKGCG--MCLKVCPTQAISGERRQPHKIDTDKCIKCNSCFDRCPFGAI 594 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP + I D+C CG+C CP AI + + Sbjct: 531 CPAGA-CKALVHYEIIADKCKGCGMCLKVCPTQAISGERRQPHK 573 >gi|332089785|gb|EGI94886.1| protein aegA [Shigella dysenteriae 155-74] Length = 578 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 3 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 47 >gi|306820550|ref|ZP_07454183.1| 4Fe-4S ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551464|gb|EFM39422.1| 4Fe-4S ferredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 314 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y E CI C CV++CP C ++ + + DECI C C CP A Sbjct: 237 PYTDKEKCINC--YKCVKICPKSCI---DDKIMTNRDECIVCMACVKICPTCA 284 >gi|301024682|ref|ZP_07188328.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300396463|gb|EFJ80001.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] Length = 218 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C++VC V+ + ++ + ++ CI C +C CP AI Sbjct: 64 CHHCEEAPCLQVCLVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAI 110 >gi|170701091|ref|ZP_02892067.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] gi|170133992|gb|EDT02344.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria IOP40-10] Length = 88 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MSLMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|85860696|ref|YP_462898.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] gi|85723787|gb|ABC78730.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] Length = 642 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 YV+ E C C CV+ CP G++ + I ++C CG C CP Sbjct: 561 AYVIDPEQCRAC--QLCVKKCPAGAIDGGKDLISVIDQEKCTKCGTCFEVCP 610 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP F + I P++C C +C +CP AI Sbjct: 551 CPA-LFCKALIAYVIDPEQCRACQLCVKKCPAGAI 584 >gi|295103391|emb|CBL00935.1| Fe-S-cluster-containing hydrogenase components 1 [Faecalibacterium prausnitzii SL3/3] Length = 214 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C C+ C CP + + D+CI CG C CP Sbjct: 119 DTCRQCEDPACGNACPQKAITTDSRGIRVVDTDKCIGCGACHDACP 164 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 14/56 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCGVCEPECPVDA 54 V T+ CI C C + CP + ++P+ +CI CG C CP A Sbjct: 148 VDTDKCIGCG--ACHDACPW-------HMPTVNPETGKSSKCIACGACVAGCPSGA 194 >gi|242398680|ref|YP_002994104.1| ATPase, ParA/MinD family, containing ferredoxin domains [Thermococcus sibiricus MM 739] gi|242265073|gb|ACS89755.1| ATPase, ParA/MinD family, containing ferredoxin domains [Thermococcus sibiricus MM 739] Length = 295 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 +E CI C C E CP DC + ++ C CGVC CPV+ Sbjct: 68 SETCIKCG--ICAERCPYDCIKILDENYVVNELTCEGCGVCRLVCPVN 113 Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 16/32 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 G I+ + CI CG+C CP D IK E Sbjct: 60 GAKVAKINSETCIKCGICAERCPYDCIKILDE 91 >gi|157376694|ref|YP_001475294.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319068|gb|ABV38166.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 231 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 +C C+ CV+VCP + + E + ++PD+C+ C C CP Sbjct: 99 SCQHCEDAPCVKVCPTGAAYIDSETGIVGVNPDKCVGCQYCIAACPYQ 146 >gi|153207582|ref|ZP_01946265.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212217980|ref|YP_002304767.1| electron transport complex protein [Coxiella burnetii CbuK_Q154] gi|120576550|gb|EAX33174.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212012242|gb|ACJ19622.1| electron transport complex protein [Coxiella burnetii CbuK_Q154] Length = 213 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V + CI C T C++ CP D + + D C C +C P CPVD I Sbjct: 81 AFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCIDMKII 138 Query: 61 PGLELWLKINSEYATQWPNITTKK 84 L K + A QW + KK Sbjct: 139 APLTPHEK--KQKAQQWRSRYEKK 160 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 110 MHTVITDACTGCEL--CLPPCPVDCI 133 >gi|332087445|gb|EGI92573.1| hydrogenase-4 component A [Shigella boydii 5216-82] Length = 203 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCEVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|325578553|ref|ZP_08148653.1| hydrogenase-4 component A [Haemophilus parainfluenzae ATCC 33392] gi|325159789|gb|EGC71919.1| hydrogenase-4 component A [Haemophilus parainfluenzae ATCC 33392] Length = 214 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C VCPV + + ++ CI C +C CP AI Sbjct: 66 CRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 112 >gi|311697015|gb|ADP99888.1| protein containing 4Fe-4S ferredoxin, iron-sulfur binding, subgroup domains [marine bacterium HP15] Length = 637 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C++VCP + + + + I D C CG C CP A+ + P Sbjct: 270 TRCLDVCPTEAIFSFGDHIQIDSDICAGCGSCAAVCPTSAVTMNETP 316 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 ++ C LC CV +CP + + + + C+ CG+CE CP AI Sbjct: 490 SDKCTLCL--ACVSLCPTGALGDHPDRPEVQFTENACVQCGICESTCPETAI 539 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 + I D+C C C CP A+ + + + N+ Sbjct: 486 IEIDSDKCTLCLACVSLCPTGALGDHPDRPEVQFTE-NA 523 >gi|218779007|ref|YP_002430325.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760391|gb|ACL02857.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 362 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C +C++ C V + I + CI CG C CP +AI Sbjct: 293 GDLCIGCG--ECLDRCQVAAISLDGDAAVIAGEYCIGCGNCATVCPQEAI 340 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D CI CG C C V AI D + Sbjct: 291 IDGDLCIGCGECLDRCQVAAISLDGDAA 318 >gi|206891168|ref|YP_002247862.1| tetrathionate reductase, subunit B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743106|gb|ACI22163.1| tetrathionate reductase, subunit B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CV VCPV F + CI C C CP A + P + Sbjct: 119 CNHCDNAPCVRVCPVKATFKRADGITMQDMHRCIGCKFCMAGCPYGARNYNFLPPRDYIK 178 Query: 68 KINSEYATQWPNITTKK 84 ++N EY T+ + K Sbjct: 179 ELNPEYPTRTIGVVEKC 195 >gi|150019920|ref|YP_001305274.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosipho melanesiensis BI429] gi|149792441|gb|ABR29889.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosipho melanesiensis BI429] Length = 97 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M ++ +CI CK CV VCPV+ + + F I+ + C CG+C +CP +AI+P+ Sbjct: 1 MPWIRESDCIKCKF--CVNVCPVEGAIIMKEDGFPYINNEICTRCGLCMEKCPKNAIRPN 58 Query: 59 TE 60 E Sbjct: 59 YE 60 >gi|118602190|ref|YP_903405.1| electron transport complex, RnfABCDGE type, B subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567129|gb|ABL01934.1| electron transport complex, RnfABCDGE type, B subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 179 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 CI C T C++VCPVD F + I DEC C +C P CPVD I Sbjct: 118 CIGC--TLCIQVCPVDAFLGASKMMTQVII-DECTGCDLCIPVCPVDCIH 164 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY 27 MT V+ + C C C+ VCPVDC + Sbjct: 140 MTQVIIDECTGCDL--CIPVCPVDCIH 164 >gi|17555194|ref|NP_498595.1| hypothetical protein T20H4.5 [Caenorhabditis elegans] gi|3929363|sp|Q22619|NDUS8_CAEEL RecName: Full=Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|4972961|gb|AAD34863.1|AF140272_1 NADH oxidoreductase complex I 23.8 kDa subunit [Caenorhabditis elegans] gi|459011|gb|AAA50662.1| Hypothetical protein T20H4.5 [Caenorhabditis elegans] Length = 212 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 167 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 152 CIYCGL--CQEACPVDAIVEGPNFEY 175 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 111 ERCIACKLCEAICPAQAITIEAE 133 >gi|323142517|ref|ZP_08077333.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322412950|gb|EFY03853.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 278 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C + CP+ E I CI CG C CP AI Sbjct: 222 ACIGC--TKCAQNCPMRAITMHERQATIDRRLCIICGKCAHGCPKQAI 267 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 10/49 (20%) Query: 17 CVEVCPVD----------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ +CPV F G + + + CI C C CP+ AI Sbjct: 190 CLFICPVGTYNSLFHIFGRFVPGAFAMQVRKNACIGCTKCAQNCPMRAI 238 >gi|213420835|ref|ZP_03353901.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 169 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 100 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 158 >gi|167851341|ref|ZP_02476849.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei B7210] Length = 296 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 83 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 136 >gi|165918320|ref|ZP_02218406.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 334] gi|165917970|gb|EDR36574.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 334] Length = 213 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V + CI C T C++ CP D + + D C C +C P CPVD I Sbjct: 81 AFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCIDMKII 138 Query: 61 PGLELWLKINSEYATQWPNITTKK 84 L K + A QW + KK Sbjct: 139 APLTPHEK--KQKAQQWRSRYEKK 160 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 110 MHTVITDACTGCEL--CLPPCPVDCI 133 >gi|34557118|ref|NP_906933.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Wolinella succinogenes DSM 1740] gi|34482833|emb|CAE09833.1| MOLYBDOPTERIN OXIDOREDUCTASE, IRON-SULFUR BINDING SUBUNIT [Wolinella succinogenes] Length = 187 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + C C++ C EVCP + Y E + P +CI C C CP DA D Sbjct: 59 FIPSQCQHCENAPCQEVCPTNATYYDERGFVSVDPKKCIMCTYCMTACPYDARYVD 114 >gi|303327190|ref|ZP_07357632.1| putative pyruvate formate-lyase activating enzyme [Desulfovibrio sp. 3_1_syn3] gi|302863178|gb|EFL86110.1| putative pyruvate formate-lyase activating enzyme [Desulfovibrio sp. 3_1_syn3] Length = 297 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C CP + LAI D+C CG+C CP A++ Sbjct: 54 CVGCG--SCASACPKGLIAMRDGSLAIERDQCDACGLCAAACPSTALR 99 >gi|291276488|ref|YP_003516260.1| putative ferredoxin [Helicobacter mustelae 12198] gi|290963682|emb|CBG39514.1| putative ferredoxin [Helicobacter mustelae 12198] Length = 83 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++ E CI C C E CP EG+ I PD C +C C CPVDA Sbjct: 1 MSLLIDEECIACD--ACREECPNSAIEEGDPIYMIDPDLCTECVGFYDEPSCVAVCPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDPD 64 >gi|289807490|ref|ZP_06538119.1| tetrathionate reductase subunit B [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 168 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C + CV VCPV ++ E+ + + C+ C C CP DA I +T+ + Sbjct: 24 CNHCDNPPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFINHETQTADK 82 >gi|218702339|ref|YP_002409968.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli IAI39] gi|218372325|emb|CAR20193.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli IAI39] Length = 157 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|197285164|ref|YP_002151036.1| electron transport complex protein [Proteus mirabilis HI4320] gi|227355594|ref|ZP_03839989.1| NADH dehydrogenase (ubiquinone) [Proteus mirabilis ATCC 29906] gi|194682651|emb|CAR42772.1| electron transport complex protein [Proteus mirabilis HI4320] gi|227164390|gb|EEI49279.1| NADH dehydrogenase (ubiquinone) [Proteus mirabilis ATCC 29906] Length = 208 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +NCI C T C++ CPVD + I D C C +C P CP D I Sbjct: 115 DNCIGC--TKCIQACPVDAIVGATRAMHTIIEDLCTGCDLCVPPCPTDCI 162 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D CI C C CPVDAI Sbjct: 112 IDEDNCIGCTKCIQACPVDAI 132 >gi|168817770|ref|ZP_02829770.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344958|gb|EDZ31722.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086970|emb|CBY96740.1| putative oxidoreductase, Fe-S subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|167835372|ref|ZP_02462255.1| ferredoxin [Burkholderia thailandensis MSMB43] Length = 87 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I PD+C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPDKCTECVGHFDGPQCQQVCPVEC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPRDPD 64 >gi|15644044|ref|NP_229093.1| ferredoxin [Thermotoga maritima MSB8] gi|170289313|ref|YP_001739551.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga sp. RQ2] gi|4981847|gb|AAD36363.1|AE001784_5 ferredoxin [Thermotoga maritima MSB8] gi|170176816|gb|ACB09868.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga sp. RQ2] Length = 95 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 5 VTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C+ C +CV+VCPV+ I +CI CG C CPV AI+P+ E Sbjct: 4 VNSKCVGCG--NCVKVCPVEGAIRIENGKAVIDNYKCIRCGKCFDACPVGAIRPNYE 58 >gi|262402645|ref|ZP_06079206.1| electron transport complex protein RnfB [Vibrio sp. RC586] gi|262351427|gb|EEZ00560.1| electron transport complex protein RnfB [Vibrio sp. RC586] Length = 195 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G L + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKALHTVIKNECTGCDLCVAPCPTDCIEMIPI 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|260170367|ref|ZP_05756779.1| flavodoxin [Bacteroides sp. D2] gi|315918726|ref|ZP_07914966.1| flavodoxin [Bacteroides sp. D2] gi|313692601|gb|EFS29436.1| flavodoxin [Bacteroides sp. D2] Length = 267 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIK 56 T CI C C++ CP++ F +N L + CI CG CE ECP DA+ Sbjct: 188 TSRCIACG--KCMKSCPMNVFTLKDNAKTPLPVDEMNCIMCGKCEKECPADAVF 239 >gi|238913616|ref|ZP_04657453.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|218190496|gb|EEC72923.1| hypothetical protein OsI_06764 [Oryza sativa Indica Group] Length = 669 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%) Query: 4 VVTEN-CI--LCKHTDCVEVCPVD-----CFYEGENFLA--IHPDECIDCGVCEPECPVD 53 VVTE+ C C C + CPV+ C + I + CI CG+C CP D Sbjct: 13 VVTEDRCRPSKCGQQ-CRKRCPVNATGRQCIEVTPSSRVSLISEELCIGCGICVKVCPFD 71 Query: 54 AIK 56 AI+ Sbjct: 72 AIQ 74 >gi|160935009|ref|ZP_02082395.1| hypothetical protein CLOLEP_03885 [Clostridium leptum DSM 753] gi|156866462|gb|EDO59834.1| hypothetical protein CLOLEP_03885 [Clostridium leptum DSM 753] Length = 431 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C+ C T+C++ CP + E I + CIDCG C CP A Sbjct: 6 DKCLGC--TNCIKRCPTEAIRVREGKAQIISERCIDCGECIRVCPHHA 51 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + + D+C+ C C CP +AI+ Sbjct: 1 MTLDKDKCLGCTNCIKRCPTEAIR 24 >gi|159903401|ref|YP_001550745.1| ferredoxin [Prochlorococcus marinus str. MIT 9211] gi|159888577|gb|ABX08791.1| Ferredoxin [Prochlorococcus marinus str. MIT 9211] Length = 73 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPV- 52 M + + + I C + CPV+C G+ N+ I + CIDCGVC CPV Sbjct: 1 MPHTIVSD-ICEGVASCFQACPVECIKPGQGGNMKGTNYYYIDFNTCIDCGVCLEVCPVK 59 Query: 53 DAIKPDTEPGLE 64 A+ + P L+ Sbjct: 60 GAVIAEERPDLQ 71 >gi|257790263|ref|YP_003180869.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830362|ref|ZP_08163819.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|257474160|gb|ACV54480.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487829|gb|EGC90267.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 394 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C +VC C +N L I P+ CI CG C CP A++ EL Sbjct: 37 MKCADVCTSGCISYDDNELVIEPERCIGCGTCATVCPTCALEAHRPNDAEL 87 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 9/65 (13%) Query: 3 YVVTEN--CILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+ + C C C CP +G + P +C+ C C CP A+ Sbjct: 287 HVIIDPEKCSSC--QMCATFCPTGAIAKYAGEDGSIGVTHRPVDCVKCRCCTDICPEGAL 344 Query: 56 KPDTE 60 + E Sbjct: 345 ELSDE 349 >gi|242281199|ref|YP_002993328.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242124093|gb|ACS81789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 428 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 12/64 (18%) Query: 8 NCILCKHTDCVEVCPVDCFY------EGEN----FLAIHPDECIDCGVCEPECPVDAIKP 57 +C C C CP+D G F I+ + C+ CGVC +CP A++ Sbjct: 293 DCNGCG--KCARACPIDAITMHKENVPGAEKPRRFAEINKNICLGCGVCALKCPTGALQM 350 Query: 58 DTEP 61 D Sbjct: 351 DKRE 354 >gi|188584735|ref|YP_001916280.1| Fe-S cluster domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349422|gb|ACB83692.1| Fe-S cluster domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 460 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E+CI C H C++ CP I + CIDCG C CP +A Sbjct: 13 ESCIGCVH--CLKFCPTQAIRIKGGRAEILKERCIDCGGCIQICPNNA 58 >gi|319428322|gb|ADV56396.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens 200] Length = 553 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALSSYLNKIISRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|94269003|ref|ZP_01291347.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93451383|gb|EAT02241.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 265 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V C C + CV CP F + + +A+ CI C C CP A + Sbjct: 122 VLNLCNHCDNPPCVRACPTKATFKKADGVVAMDYHRCIGCRFCMAACPYGARSFNWREPR 181 Query: 64 ELWLKINSEYATQWPNITTKK 84 +IN +Y + + K Sbjct: 182 HHIREINPDYPARTIGVVEKC 202 >gi|146291447|ref|YP_001181871.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563137|gb|ABP74072.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 553 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALSSYLNKIISRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|320179068|gb|EFW54027.1| NrfC protein [Shigella boydii ATCC 9905] Length = 223 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|308270558|emb|CBX27170.1| hypothetical protein N47_A11990 [uncultured Desulfobacterium sp.] Length = 263 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C CK CV CP F + + +A+ CI C C CP + + Sbjct: 126 CNQCKDAPCVRACPTKATFKQADGIVAMDFHRCIGCRFCMAACPYGSRSFNFRDPRPFVK 185 Query: 68 KINSEYATQWPNITTKK 84 +IN ++ T+ + K Sbjct: 186 EINKKFPTRARGVVEKC 202 >gi|302339910|ref|YP_003805116.1| methyl-accepting chemotaxis sensory transducer [Spirochaeta smaragdinae DSM 11293] gi|301637095|gb|ADK82522.1| methyl-accepting chemotaxis sensory transducer [Spirochaeta smaragdinae DSM 11293] Length = 702 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 9 CILCKHTDCVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEP 61 C+ C C+ CPV C + + IH D CI CG C C +A + DTE Sbjct: 16 CVNC--HACIAACPVKYCIDGSGSTVTIHHDLCIGCGKCIEACTHNARSVVDDTEA 69 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 35 IHPDECIDCGVCEPECPV 52 I +C++C C CPV Sbjct: 11 IDESKCVNCHACIAACPV 28 >gi|294494958|ref|YP_003541451.1| cobyrinic acid ac-diamide synthase [Methanohalophilus mahii DSM 5219] gi|292665957|gb|ADE35806.1| Cobyrinic acid ac-diamide synthase [Methanohalophilus mahii DSM 5219] Length = 285 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C CV+ C EG I P C CGVCE CP DA+ + E + Sbjct: 66 ELCTGCG--ICVDHCRFGAIKEG---FEIDPYICEGCGVCEYVCPADAVTMEYNKCGEAY 120 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 35 IHPDECIDCGVCEPECPVDAIKP 57 IHP+ C CG+C C AIK Sbjct: 63 IHPELCTGCGICVDHCRFGAIKE 85 >gi|237732063|ref|ZP_04562544.1| thiosulfate reductase electron transporter PhsB [Citrobacter sp. 30_2] gi|226907602|gb|EEH93520.1| thiosulfate reductase electron transporter PhsB [Citrobacter sp. 30_2] Length = 192 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV VCP + EN + + CI C C CP Sbjct: 63 SCQHCEDAPCVSVCPTGASFRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|207857890|ref|YP_002244541.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206709693|emb|CAR34043.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 653 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|164686673|ref|ZP_02210701.1| hypothetical protein CLOBAR_00268 [Clostridium bartlettii DSM 16795] gi|164604063|gb|EDQ97528.1| hypothetical protein CLOBAR_00268 [Clostridium bartlettii DSM 16795] Length = 184 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C + CP D N + + +CI C C CP+ AI Sbjct: 59 CRQCEDAPCAKACPQDAISRKNNAIIVDQKKCIGCKNCMLACPLGAI 105 >gi|54301686|ref|YP_131679.1| putative tetrathionate reductase, subunit B [Photobacterium profundum SS9] gi|46915106|emb|CAG21879.1| putative tetrathionate reductase, subunit B [Photobacterium profundum SS9] Length = 222 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV+VCPV Y+ E+ + + C+ C C CP DA Sbjct: 110 CNHCDNPPCVKVCPVQATYQREDGIVMVDNKRCVACAYCVQACPYDA 156 >gi|15598686|ref|NP_252180.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PAO1] gi|107103020|ref|ZP_01366938.1| hypothetical protein PaerPA_01004089 [Pseudomonas aeruginosa PACS2] gi|218890265|ref|YP_002439129.1| electron transport complex protein RnfB [Pseudomonas aeruginosa LESB58] gi|254242171|ref|ZP_04935493.1| hypothetical protein PA2G_02902 [Pseudomonas aeruginosa 2192] gi|17369007|sp|Q9HYB9|RNFB_PSEAE RecName: Full=Electron transport complex protein rnfB gi|226735423|sp|B7UWJ3|RNFB_PSEA8 RecName: Full=Electron transport complex protein rnfB gi|9949636|gb|AAG06878.1|AE004770_3 probable ferredoxin [Pseudomonas aeruginosa PAO1] gi|126195549|gb|EAZ59612.1| hypothetical protein PA2G_02902 [Pseudomonas aeruginosa 2192] gi|218770488|emb|CAW26253.1| probable ferredoxin [Pseudomonas aeruginosa LESB58] Length = 188 Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ + Sbjct: 106 AYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMREI 163 Query: 60 EPGLELW 66 + W Sbjct: 164 PDDVRHW 170 Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 P+D E I ECI C C CPVDAI Sbjct: 94 PLDAAEETPPRVAYIREAECIGCTKCIQACPVDAI 128 >gi|310826460|ref|YP_003958817.1| Fe-S cluster domain protein [Eubacterium limosum KIST612] gi|308738194|gb|ADO35854.1| Fe-S cluster domain protein [Eubacterium limosum KIST612] Length = 452 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+ + C+ C T C+ CP E I +CIDCG C CP A T+P Sbjct: 9 YLDKDKCLGC--TTCLRSCPTGAIRVREGKAKIIESKCIDCGECIRVCPHHAKMAKTDP 65 Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + + D+C+ C C CP AI+ Sbjct: 8 VYLDKDKCLGCTTCLRSCPTGAIR 31 >gi|331675602|ref|ZP_08376349.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA280] gi|331067210|gb|EGI38618.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA280] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|303247436|ref|ZP_07333708.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] gi|302491132|gb|EFL51024.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] Length = 266 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V + C C CV CPV C + ++ + CI C C CP A Sbjct: 189 TVADECERCGQ--CVTACPVGCVHLEDSGVVTDKAACIRCCACVKGCPTGA 237 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 DEC CG C CPV + + Sbjct: 192 DECERCGQCVTACPVGCVHLED 213 >gi|301156226|emb|CBW15697.1| predicted iron-sulfur protein [Haemophilus parainfluenzae T3T1] Length = 197 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP D I Sbjct: 102 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCI 154 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 18 VEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 V+V +D E E + I + CI C C CPVDAI Sbjct: 86 VDVPAMDDVAEPEEMVAFIDENMCIGCTKCIQACPVDAI 124 >gi|300937183|ref|ZP_07152035.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|300457737|gb|EFK21230.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 157 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|260432364|ref|ZP_05786335.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416192|gb|EEX09451.1| iron-sulfur cluster-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 249 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDAAAG 137 >gi|254571471|ref|XP_002492845.1| hypothetical protein [Pichia pastoris GS115] gi|238032643|emb|CAY70666.1| Hypothetical protein PAS_chr3_0619 [Pichia pastoris GS115] Length = 211 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 110 ERCIACKL--CEAVCPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIV 167 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 +T N EYAT+ + K++ L + K + Sbjct: 168 -ETP---------NVEYATETREELLYNKEKLLANGDKWE 197 >gi|163732626|ref|ZP_02140071.1| 4Fe-4S binding domain protein [Roseobacter litoralis Och 149] gi|161393986|gb|EDQ18310.1| 4Fe-4S binding domain protein [Roseobacter litoralis Och 149] Length = 252 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWACPYGARELDQAEG 137 >gi|119505634|ref|ZP_01627705.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2080] gi|119458577|gb|EAW39681.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2080] Length = 200 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 114 AYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIADECTGCDLCVEPCPVDCI 166 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 14/26 (53%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 N I DECI C C CPVDAI Sbjct: 111 PNVAYIREDECIGCTKCIQACPVDAI 136 Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF 32 M V+ + C C CVE CPVDC Sbjct: 143 MHTVIADECTGCDL--CVEPCPVDCIDMLPRK 172 >gi|109947128|ref|YP_664356.1| hypothetical protein Hac_0535 [Helicobacter acinonychis str. Sheeba] gi|109714349|emb|CAJ99357.1| fdx [Helicobacter acinonychis str. Sheeba] Length = 83 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYYDEPSCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|73532680|dbj|BAE19898.1| tetrathionate reductase subunit B [Edwardsiella tarda] Length = 188 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV VCPV Y+ ++ + + C+ C C CP DA Sbjct: 61 CNHCENPPCVAVCPVQATYQRDDGIVMVDNRRCVGCAYCIQACPYDA 107 >gi|329765826|ref|ZP_08257392.1| putative ATPase RIL [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137669|gb|EGG41939.1| putative ATPase RIL [Candidatus Nitrosoarchaeum limnia SFB1] Length = 595 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 1 MTYVVT----ENCI--LCKHTDCVEVCPV-----DCF--YEGENFLAIHPDECIDCGVCE 47 MT+ V E C C +C++ CPV DC E I + C CG+C Sbjct: 1 MTHRVAVLDKELCQPKKCG-LECIKYCPVNKSGADCIILNEESKKAQIDENVCNGCGICV 59 Query: 48 PECPVDAI 55 CP +AI Sbjct: 60 KVCPFEAI 67 >gi|171060171|ref|YP_001792520.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170777616|gb|ACB35755.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 90 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T CI C C CP GE++ I P C +C C CPV+ Sbjct: 1 MALIITSECINCDV--CEPECPNQAISMGEDYYVIDPARCTECVGHFGEPQCVQVCPVEC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P +E ++ +Y Sbjct: 59 I-PVDPAHVETHQQLERKY 76 >gi|168263386|ref|ZP_02685359.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347881|gb|EDZ34512.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP + + N + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACPY 137 >gi|119871780|ref|YP_929787.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673188|gb|ABL87444.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 232 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C+ C+EVCP Y+ + + I D+CI C C CP Sbjct: 69 CNHCEKAPCLEVCPTQATYKTKEGIVLIDKDKCIGCRYCIMACPYG 114 >gi|319945304|ref|ZP_08019566.1| ferredoxin [Lautropia mirabilis ATCC 51599] gi|319741874|gb|EFV94299.1| ferredoxin [Lautropia mirabilis ATCC 51599] Length = 109 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + G + I P+ C +C C CPV+ Sbjct: 1 MALIITDECINCD--CCEPECPNEAISMGPEYYIIDPNRCTECVGHFDEPQCAQICPVEC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|308272002|emb|CBX28610.1| hypothetical protein N47_G39340 [uncultured Desulfobacterium sp.] Length = 1018 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDC---FYEGENFL----AIHPDECIDCGVCEPECPVDAIK 56 V+ C C CV +CP E F I+P C CG+C C AI+ Sbjct: 945 VIPAACSSCGV--CVSICPYSAPSFIEETARFFPGKANINPALCKGCGLCVASCRSGAIR 1002 Query: 57 PDTEPGLELWLKI 69 +++ +I Sbjct: 1003 LKGFDNDQIFAQI 1015 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 29/84 (34%), Gaps = 25/84 (29%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA------------------IHPDECI--- 41 YV CI C C E CP E + L+ I PD C+ Sbjct: 111 YVDMNKCIACGL--CAEKCPKKVINEYDGSLSKRKAIYVKYAQAVPLKYAIDPDNCLFLT 168 Query: 42 --DCGVCEPECPVDAIKPDTEPGL 63 C CE CP DAI D +P Sbjct: 169 KGKCRACEKFCPADAINFDDQPKD 192 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWP 78 + ++CI CG+C +CP I + + L I +YA P Sbjct: 111 YVDMNKCIACGLCAEKCPKKVIN-EYDGSLSKRKAIYVKYAQAVP 154 >gi|302340162|ref|YP_003805368.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Spirochaeta smaragdinae DSM 11293] gi|301637347|gb|ADK82774.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Spirochaeta smaragdinae DSM 11293] Length = 595 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +++ + CI C C CPV L I D CI CG C C DA+ Sbjct: 541 HILADKCIGCGV--CARKCPVHAINGERRQLHEIDHDICIKCGECYKACKFDAVY 593 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 17/32 (53%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I D+CI CGVC +CPV AI + E Sbjct: 540 YHILADKCIGCGVCARKCPVHAINGERRQLHE 571 >gi|292491704|ref|YP_003527143.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291580299|gb|ADE14756.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 557 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 + C LC CV VCP +G L C+ CGVC+ CP DAI Sbjct: 433 QTCTLCL--ACVSVCPASALLDGGERPQLRFIEANCVQCGVCQAACPEDAI 481 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+E CP + + ++P C G C CP AI EL Sbjct: 204 CLEACPTLAITSVGDKIQVNPYLCQGGGSCTAACPTGAITYAYPTVDEL 252 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 15/54 (27%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA----------IHPDE---CIDCG 44 + NC+ C C CP D + ++ +E CI+CG Sbjct: 461 FIEANCVQCGV--CQAACPEDAIALSPRMVYESIRNRETRVLNEEEPFACIECG 512 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 13/36 (36%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + C C C CP A+ E +++ N Sbjct: 430 VDRQTCTLCLACVSVCPASALLDGGERPQLRFIEAN 465 >gi|251792885|ref|YP_003007611.1| electron transport protein HydN [Aggregatibacter aphrophilus NJ8700] gi|247534278|gb|ACS97524.1| electron transport protein HydN [Aggregatibacter aphrophilus NJ8700] Length = 199 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C VCPV + + ++ CI C +C CP AI Sbjct: 51 CRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|160944511|ref|ZP_02091739.1| hypothetical protein FAEPRAM212_02024 [Faecalibacterium prausnitzii M21/2] gi|158444293|gb|EDP21297.1| hypothetical protein FAEPRAM212_02024 [Faecalibacterium prausnitzii M21/2] Length = 217 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C C+ C CP + + D+CI CG C CP Sbjct: 122 DTCRQCEDPACGNACPQKAITTDSRGIRVVDTDKCIGCGACHDACP 167 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 14/56 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCGVCEPECPVDA 54 V T+ CI C C + CP + ++P+ +CI CG C CP A Sbjct: 151 VDTDKCIGCG--ACHDACPW-------HMPTVNPETGKSSKCIACGACVAGCPSGA 197 >gi|225428485|ref|XP_002284290.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297741457|emb|CBI32588.3| unnamed protein product [Vitis vinifera] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|120600652|ref|YP_965226.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|120560745|gb|ABM26672.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] Length = 553 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + I P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLPTPQALSSYLNKIISRF 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMSLQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 >gi|319639534|ref|ZP_07994281.1| ferredoxin [Neisseria mucosa C102] gi|317399105|gb|EFV79779.1| ferredoxin [Neisseria mucosa C102] Length = 83 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I D E E + ++ ++Y Sbjct: 59 ILIDEEHP-ETYEELMAKY 76 >gi|237752866|ref|ZP_04583346.1| ferredoxin [Helicobacter winghamensis ATCC BAA-430] gi|229375133|gb|EEO25224.1| ferredoxin [Helicobacter winghamensis ATCC BAA-430] Length = 83 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEECIACD--ACREECPNEAIEEGDPYYIIDPERCTECFGFYDEPACLSVCPVDA 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IISDPD 64 >gi|242309040|ref|ZP_04808195.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] gi|239524464|gb|EEQ64330.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] Length = 83 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEKCIACD--ACREECPNEAIEEGDPYYIIDPERCTECYGFYDEPACLSVCPVDA 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IVSDPD 64 >gi|71065158|ref|YP_263885.1| NADH dehydrogenase subunit I [Psychrobacter arcticus 273-4] gi|110287768|sp|Q4FU57|NUOI_PSYA2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71038143|gb|AAZ18451.1| NADH dehydrogenase I, subunit I [Psychrobacter arcticus 273-4] Length = 182 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + + +++ + Y + I+ + Sbjct: 118 MTPDFEMSEYVRQDLVYEKEHLLISGPGKYPD 149 >gi|46200681|ref|ZP_00207795.1| COG0369: Sulfite reductase, alpha subunit (flavoprotein) [Magnetospirillum magnetotacticum MS-1] Length = 393 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPVD + D+C C C CP AI Sbjct: 14 CIRCN--TCEEACPVDAITHDGTNYVVSFDKCTGCRTCVSPCPTGAI 58 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 16/32 (50%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E + I P CI C CE CPVDAI D Sbjct: 1 MELKRQHLIDPVVCIRCNTCEEACPVDAITHD 32 >gi|315186450|gb|EFU20210.1| electron transport complex, RnfABCDGE type, B subunit [Spirochaeta thermophila DSM 6578] Length = 289 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPV--DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C CV+VC N I P +CI CG C ECP AI Sbjct: 223 ACIGCG--KCVKVCETVTQAITLEHNLAYIDPVKCIACGKCVAECPTGAI 270 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 14 HTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 + DC E CP D + ++C CGVC CP Sbjct: 148 YGDCAEACPFDAISMDPVTGLPVVDEEKCTACGVCVEVCP 187 >gi|307718964|ref|YP_003874496.1| hypothetical protein STHERM_c12820 [Spirochaeta thermophila DSM 6192] gi|306532689|gb|ADN02223.1| hypothetical protein STHERM_c12820 [Spirochaeta thermophila DSM 6192] Length = 289 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPV--DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C CV+VC N I P +CI CG C ECP AI Sbjct: 223 ACIGCG--KCVKVCETVTQAITLEHNLAYIDPVKCIACGKCVAECPTGAI 270 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 14 HTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 + DC E CP D + ++C CGVC CP Sbjct: 148 YGDCAEACPFDAISMDPVTGLPVVDEEKCTACGVCVEVCP 187 >gi|225181373|ref|ZP_03734817.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167954|gb|EEG76761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiobacter alkaliphilus AHT 1] Length = 54 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 MTY +T+ C+ C C++ CP D EG+ + D+C +CG+C ECP DAI + Sbjct: 1 MTYKITDECVACG--ACLDSCPSDAIVEGD--VYTINDDCAECGLCVDECPSDAIIEE 54 >gi|187251162|ref|YP_001875644.1| putative PAS/PAC sensor protein [Elusimicrobium minutum Pei191] gi|186971322|gb|ACC98307.1| Putative PAS/PAC sensor protein [Elusimicrobium minutum Pei191] Length = 559 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 NC C C+ CPV N I DECI CG C CP A I+ D E Sbjct: 11 NCKNC--YKCIRHCPVKSIRVSGNQAHIINDECILCGQCFVVCPQGAKQIESDIE 63 >gi|148380175|ref|YP_001254716.1| 4Fe-4S cluster containing ParA family ATPase protein [Clostridium botulinum A str. ATCC 3502] gi|153934264|ref|YP_001384474.1| iron-sulfur binding protein [Clostridium botulinum A str. ATCC 19397] gi|153936550|ref|YP_001387990.1| iron-sulfur binding protein [Clostridium botulinum A str. Hall] gi|148289659|emb|CAL83763.1| 4Fe-4S cluster containing ParA family ATPase protein [Clostridium botulinum A str. ATCC 3502] gi|152930308|gb|ABS35808.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum A str. ATCC 19397] gi|152932464|gb|ABS37963.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum A str. Hall] Length = 281 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T+C VC D L I P C CG C CP +AIK + E + + Sbjct: 65 DICIKC--TECELVCKFDAIKN----LKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G +I D CI C CE C DAIK Sbjct: 56 GGKKASIDEDICIKCTECELVCKFDAIK 83 >gi|150391494|ref|YP_001321543.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149951356|gb|ABR49884.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 157 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + +C C+ C+++CP + + + I+ D+C CG+CE CP I Sbjct: 62 IPAHCRHCQEAFCLQLCPTKAITQEKKVVVINDDKCTGCGICEQGCPYGVI 112 >gi|257438725|ref|ZP_05614480.1| thiosulfate reductase electron transport protein phsb [Faecalibacterium prausnitzii A2-165] gi|257198860|gb|EEU97144.1| thiosulfate reductase electron transport protein phsb [Faecalibacterium prausnitzii A2-165] Length = 214 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C C+ C CP E + + D+CI CG C CP Sbjct: 119 DTCRQCEDPACGNACPQKAIVTNEQGIRVVDTDKCIGCGACVEACP 164 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 14/56 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCGVCEPECPVDA 54 V T+ CI C CVE CP + ++P+ +CI CG C CP A Sbjct: 148 VDTDKCIGCG--ACVEACPW-------HMPTVNPETGKSSKCIACGACVAGCPSGA 194 >gi|254037077|ref|ZP_04871154.1| formate-dependent nitrite reductase [Escherichia sp. 1_1_43] gi|226840183|gb|EEH72185.1| formate-dependent nitrite reductase [Escherichia sp. 1_1_43] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|32470879|ref|NP_863872.1| molybdopterin oxidoreductase, iron sulfur subunit [Rhodopirellula baltica SH 1] gi|32443024|emb|CAD71545.1| molybdopterin oxidoreductase, iron sulfur subunit [Rhodopirellula baltica SH 1] Length = 623 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C+ C+ CPV + + + H D+CI C C CP + K Sbjct: 176 VTTACHHCEDPGCLNGCPVKAYDKDPETGIVRHLDDQCIGCKYCTMMCPYEVPKY 230 >gi|319776070|ref|YP_004138558.1| Electron transport complex protein RnfB [Haemophilus influenzae F3047] gi|301170439|emb|CBW30046.1| predicted iron-sulfur protein [Haemophilus influenzae 10810] gi|317450661|emb|CBY86881.1| Electron transport complex protein RnfB [Haemophilus influenzae F3047] Length = 193 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP D I Sbjct: 103 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCI 155 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E I + CI C C CPVDAI Sbjct: 100 EKVAFIDENMCIGCTKCIQACPVDAI 125 >gi|258516509|ref|YP_003192731.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780214|gb|ACV64108.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 947 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V T +C C C+ CP E+ + I+P +C CG+C ECP++A++ Sbjct: 880 VNTGDCAACL--TCLRTCPYSVPKIVEHKVFINPVQCRGCGICTSECPLNALE 930 >gi|223982716|ref|ZP_03632946.1| hypothetical protein HOLDEFILI_00220 [Holdemania filiformis DSM 12042] gi|223965312|gb|EEF69594.1| hypothetical protein HOLDEFILI_00220 [Holdemania filiformis DSM 12042] Length = 201 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M Y +T C C C+ VCP C I + C+ CG C+ CP A+ + Sbjct: 145 MRYGITAKCDGCGV--CLSVCPQQCIELTGKQAHIRQEHCLHCGQCQQHCPKQAVVRE 200 >gi|254423403|ref|ZP_05037121.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] gi|196190892|gb|EDX85856.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] Length = 533 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 9/67 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDC-----GVCEPECPVD 53 M Y + ENCI C C +CP D + I P C C +C C Sbjct: 1 MNYTIKENCIACDV--CQPLCPQDAIKPNSESDGYWIDPTLCDGCPDLEIPLCVSACDTG 58 Query: 54 AIKPDTE 60 A+KP Sbjct: 59 ALKPLPP 65 Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 18/31 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C VC+P CP DAIKP++E Sbjct: 1 MNYTIKENCIACDVCQPLCPQDAIKPNSESD 31 >gi|254230289|ref|ZP_04923678.1| 4Fe-4S binding domain protein [Vibrio sp. Ex25] gi|151937186|gb|EDN56055.1| 4Fe-4S binding domain protein [Vibrio sp. Ex25] Length = 249 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 116 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 164 >gi|126175973|ref|YP_001052122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125999178|gb|ABN63253.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 188 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y GE+ + +IH ++C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGEDGIISIHTEKCVGCMYCVAACPY 104 Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 14/74 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG----------VCEPECPVDAI 55 TE C+ C + CV CP + A D+C C C CP DA+ Sbjct: 89 TEKCVGCMY--CVAACPYKVRFMNPETKA--ADKCNFCKDSRLARGEEPACVTVCPTDAL 144 Query: 56 KPDTEPGLELWLKI 69 + + I Sbjct: 145 VFGDANDPQSDVAI 158 >gi|284048714|ref|YP_003399053.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidaminococcus fermentans DSM 20731] gi|283952935|gb|ADB47738.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidaminococcus fermentans DSM 20731] Length = 57 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + ++ CI C C CPV E + CIDC C CPV AIK + Sbjct: 1 MAHKINQDECIGCG--SCAGTCPVGAIAEDNGKYKVDEASCIDCDACTGACPVGAIKAE 57 >gi|281181155|dbj|BAI57485.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE15] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|269102198|ref|ZP_06154895.1| electron transport complex protein RnfB [Photobacterium damselae subsp. damselae CIP 102761] gi|268162096|gb|EEZ40592.1| electron transport complex protein RnfB [Photobacterium damselae subsp. damselae CIP 102761] Length = 192 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 106 AFIHEDMCIGC--TKCIQACPVDAIVGGTKAIHTVIKDECTGCKLCVAPCPTDCIEMITV 163 Query: 58 DTEPGLELW 66 + P W Sbjct: 164 EETPDTWKW 172 >gi|237712153|ref|ZP_04542634.1| F420H2:quinone oxidoreductase [Bacteroides sp. 9_1_42FAA] gi|229453474|gb|EEO59195.1| F420H2:quinone oxidoreductase [Bacteroides sp. 9_1_42FAA] Length = 407 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Query: 12 CKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECP 51 C + CV+ CP C EG + + ++CIDCG+CE CP Sbjct: 11 CGCSSCVQKCPKKCISMYEDDEGFLYPVVDKEKCIDCGLCEIVCP 55 >gi|156937594|ref|YP_001435390.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566578|gb|ABU81983.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 219 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ C VCP Y ++ + + ++CI CG C CP A Sbjct: 107 CRHCEDAPCAHVCPTRATYVTKDGVVMVDKNKCILCGACIVACPYAA 153 >gi|124027920|ref|YP_001013240.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Hyperthermus butylicus DSM 5456] gi|123978614|gb|ABM80895.1| Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Hyperthermus butylicus DSM 5456] Length = 264 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C + CPV+ + I D+C+ C C CP D + D Sbjct: 75 CMHCSEAPCAKACPVNAIEVHPEGAVVIRSDKCVGCQYCIEACPYDVPRYD 125 >gi|83309275|ref|YP_419539.1| ferredoxin-NADP reductase [Magnetospirillum magneticum AMB-1] gi|82944116|dbj|BAE48980.1| Ferredoxin-NADP reductase [Magnetospirillum magneticum AMB-1] Length = 393 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C E CPVD + D+C C C CP AI Sbjct: 14 CIRCN--TCEEACPVDAITHDGTNYVVSYDKCTGCRTCVSPCPTGAI 58 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 14/24 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P CI C CE CPVDAI D Sbjct: 9 IDPVVCIRCNTCEEACPVDAITHD 32 >gi|323141275|ref|ZP_08076171.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] gi|322414232|gb|EFY05055.1| 4Fe-4S binding domain protein [Phascolarctobacterium sp. YIT 12067] Length = 272 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CI C C + CP++ E I+ CI CGVC+ CPV AI Sbjct: 221 CIGCGL--CEKKCPMESAELAEGKAQINQHNCICCGVCQHACPVQAISY 267 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 15/19 (78%) Query: 35 IHPDECIDCGVCEPECPVD 53 + ++CI CG+CE +CP++ Sbjct: 216 VDKNQCIGCGLCEKKCPME 234 >gi|299531136|ref|ZP_07044548.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni S44] gi|298720839|gb|EFI61784.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni S44] Length = 433 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRCN--TCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHDDN 42 >gi|167549507|ref|ZP_02343266.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325402|gb|EDZ13241.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 653 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|89092828|ref|ZP_01165780.1| iron-sulfur cluster-binding protein [Oceanospirillum sp. MED92] gi|89082853|gb|EAR62073.1| iron-sulfur cluster-binding protein [Oceanospirillum sp. MED92] Length = 555 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAIKPDTEPGL 63 C LC CV VCP G A++ C+ CG+C+ CP +AI+ +T L Sbjct: 424 CTLCL--SCVAVCPTQALTAGGETPALNFVEQSCVQCGLCDSACPENAIQLETRLSL 478 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 5/67 (7%) Query: 3 YVVTENCIL-----CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ + C T C++VCP D + + I P C G C CP AI Sbjct: 178 HINNDICAHSSRGQTGCTRCLDVCPADAISSINDLVNIDPHMCHGAGGCATACPTGAISY 237 Query: 58 DTEPGLE 64 L Sbjct: 238 ALPQPLR 244 >gi|317489724|ref|ZP_07948227.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911190|gb|EFV32796.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 394 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C +VC C +N L I P+ CI CG C CP A++ EL Sbjct: 37 MKCADVCTSGCISYDDNELVIEPERCIGCGTCATVCPTCALEAHRPNDAEL 87 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + I P++C C +C CP AI Sbjct: 287 HVIIDPEKCSSCQMCATFCPTGAI 310 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 9/65 (13%) Query: 3 YVVTEN--CILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V+ + C C C CP +G + P +C+ C C CP A+ Sbjct: 287 HVIIDPEKCSSC--QMCATFCPTGAIAKYADEDGSIGVTHRPVDCVKCRCCTDICPEGAL 344 Query: 56 KPDTE 60 + E Sbjct: 345 ELSDE 349 >gi|223985317|ref|ZP_03635393.1| hypothetical protein HOLDEFILI_02699 [Holdemania filiformis DSM 12042] gi|223962718|gb|EEF67154.1| hypothetical protein HOLDEFILI_02699 [Holdemania filiformis DSM 12042] Length = 563 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 1 MTYVVTE--NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+Y+ NC C CV VCP + I DECI CG C CP A K Sbjct: 1 MSYIQLSEANCRNCL--RCVRVCPTKAMTYQNHQPTILEDECILCGKCYAICPHSAKKVH 58 Query: 59 TEPGL-ELWLK--------INSEYATQWPN 79 ++ W+ I +A+ WP+ Sbjct: 59 SDGDQVRAWIAQGQPLALSIAPSFASVWPD 88 >gi|205353583|ref|YP_002227384.1| oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273364|emb|CAR38335.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628679|gb|EGE35022.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 653 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|126465606|ref|YP_001040715.1| cobyrinic acid a,c-diamide synthase [Staphylothermus marinus F1] gi|126014429|gb|ABN69807.1| Cobyrinic acid a,c-diamide synthase [Staphylothermus marinus F1] Length = 329 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V E CI C +C+ CP + N I+ C C C CP AI+ Sbjct: 72 IVQEKCINCG--ECMNACPFNAVELINNKYVINKWICEGCYTCSFVCPTKAIR 122 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ +YEG + I ++CI+CG C CP +A++ Sbjct: 61 IEPYYEG-RYAEIVQEKCINCGECMNACPFNAVE 93 >gi|157960089|ref|YP_001500123.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845089|gb|ABV85588.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 228 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA---IHPDECIDCGVCEPECP 51 C+ C CV CPV+ E+F I PD+CI C C CP Sbjct: 102 CLQCHDAPCVTACPVNANKASEDFDFVRDIDPDKCIGCMQCIEACP 147 >gi|20093761|ref|NP_613608.1| formylmethanofuran dehydrogenase subunit F, ferredoxin containing [Methanopyrus kandleri AV19] gi|19886668|gb|AAM01538.1| Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing [Methanopyrus kandleri AV19] Length = 150 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG---ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V + C+ C C+ CPVD + + I +EC+ CG+C CP +A++ + Sbjct: 71 VDEDRCVYCGV--CMRTCPVDAIQVTKPYQGHIEIDDEECVGCGLCVEICPCNALEFGRD 128 Query: 61 PGLEL 65 E Sbjct: 129 GTAEK 133 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 + + D C+ CGVC CPVDAI+ + ++I+ E Sbjct: 66 PKNVEVDEDRCVYCGVCMRTCPVDAIQ--VTKPYQGHIEIDDE 106 >gi|116753345|ref|YP_842463.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanosaeta thermophila PT] gi|116664796|gb|ABK13823.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanosaeta thermophila PT] Length = 128 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C+ +CP F + + P +CI CG C CP A++ Sbjct: 77 EECVHCG--ACIAICPTGTFRFDDWKVVTDPGKCIQCGACVTACPHRALQ 124 >gi|295097294|emb|CBK86384.1| Fe-S-cluster-containing hydrogenase components 2 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 186 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 63 CRQCEDAPCANVCPNGAIKREKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 115 >gi|237731331|ref|ZP_04561812.1| iron-sulfur cluster-binding protein [Citrobacter sp. 30_2] gi|226906870|gb|EEH92788.1| iron-sulfur cluster-binding protein [Citrobacter sp. 30_2] Length = 239 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C C+EVCP + EN + + CI C C CP + P T+ Sbjct: 107 QSCQHCDDAPCIEVCPTGASWRDENGIVRVDTSCCIGCSYCIGACPYQVRYLNPQTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + S A +P I Sbjct: 167 KCDFCAESRLAKGFPPIC 184 >gi|51247051|ref|YP_066934.1| related to F420H2-dehydrogenase, beta subunit [Desulfotalea psychrophila LSv54] gi|50878088|emb|CAG37944.1| related to F420H2-dehydrogenase, beta subunit [Desulfotalea psychrophila LSv54] Length = 443 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFY---EGENFLA--IHPDECIDCGVCEPECPVDA 54 M ++ T E+C C C+ +CP C + E FL + C +CG+CE CPV Sbjct: 56 MIHLNTKEDCCGC--HACLSICPAKCIQMLPDTEGFLYPMVDESLCPECGLCESVCPV-- 111 Query: 55 IKPDTEPGLE-LWLKINSE 72 I P + G + N Sbjct: 112 INPPRQEGDSVAFAAWNRN 130 >gi|332140733|ref|YP_004426471.1| electron transport complex protein RnfB [Alteromonas macleodii str. 'Deep ecotype'] gi|327550755|gb|AEA97473.1| electron transport complex protein RnfB [Alteromonas macleodii str. 'Deep ecotype'] Length = 193 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 111 AFIREDECIGC--TKCIQACPVDAILGAAKHMHTVITDECTGCDLCVDPCPVDCI 163 Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 VE P+D + E+ I DECI C C CPVDAI Sbjct: 93 VEPKPLDAAHGEEDVKKVAFIREDECIGCTKCIQACPVDAI 133 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C CV+ CPVDC Sbjct: 140 MHTVITDECTGCDL--CVDPCPVDCI 163 >gi|194437237|ref|ZP_03069335.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 101-1] gi|194423793|gb|EDX39782.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 101-1] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C H CV+VCP F + + + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYHVRFIHPVTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|116750554|ref|YP_847241.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699618|gb|ABK18806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1015 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C CV CP ++ I+ C CG+C ECP AI+ ++ + Sbjct: 948 CAACLV--CVRSCPYGVPQINKDDVSEINEALCQGCGICASECPAKAIRLAHYADDQIMV 1005 Query: 68 KINS 71 K+++ Sbjct: 1006 KVDA 1009 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 27/93 (29%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDEC--ID 42 YV CI C C E CP D + G + AI C I Sbjct: 106 YVDLSKCISCG--ACAEKCPAVVSDAYNAGLGKRKAIYKLYAQATPSGYAIDAANCRRIG 163 Query: 43 ----CGVCEPECPVDAIKPDTEPGLELWLKINS 71 C VC CP A+ T+ L L++ + Sbjct: 164 RGKKCSVCAKFCPAGAVDY-TQQEQVLDLEVGA 195 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 + +CI CG C +CP + GL I YA P+ Sbjct: 106 YVDLSKCISCGACAEKCPA-VVSDAYNAGLGKRKAIYKLYAQATPS 150 >gi|108805515|ref|YP_645452.1| formate dehydrogenase subunit beta [Rubrobacter xylanophilus DSM 9941] gi|108766758|gb|ABG05640.1| formate dehydrogenase beta subunit [Rubrobacter xylanophilus DSM 9941] Length = 312 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVD 53 ++ C C C++VCP + E + + D C CG C P CP Sbjct: 134 SDVCKHCTEAPCLDVCPTGAIFRTEFGTVVVQEDVCNGCGYCIPACPFG 182 >gi|325968086|ref|YP_004244278.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta moutnovskia 768-28] gi|323707289|gb|ADY00776.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta moutnovskia 768-28] Length = 444 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 22/39 (56%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 DCV CP + N + I+ + CI+CG+C +CP A Sbjct: 117 DCVNACPTNATSIVNNRVVINENACIECGLCVSKCPTGA 155 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF----LAIHPDECIDCGVCEPECPVDAI 55 C C C CP F G + L + +CI CG C CP AI Sbjct: 314 CSFCGV--CFAKCPERAFDVGRDGNKTVLKFNSLKCIGCGHCARLCPEKAI 362 >gi|255084007|ref|XP_002508578.1| NADH dehydrogenase [Micromonas sp. RCC299] gi|226523855|gb|ACO69836.1| NADH dehydrogenase [Micromonas sp. RCC299] Length = 228 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 127 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 183 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 168 CIYCGF--CQEACPVDAIVEGPNFEY 191 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 127 ERCIACKLCEAICPAQAITIEAEERED 153 >gi|89276311|gb|ABD66512.1| mitochondrial NADH:ubiquinone oxidoreductase complex I [Gymnadenia conopsea] Length = 226 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 181 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 125 ERCIACKLCEAICPAQAITIEAEERED 151 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 166 CIYCGF--CQEACPVDAIVEGPNF 187 >gi|78224702|ref|YP_386449.1| twin-arginine translocation pathway signal [Geobacter metallireducens GS-15] gi|78195957|gb|ABB33724.1| Twin-arginine translocation pathway signal [Geobacter metallireducens GS-15] Length = 257 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C++ CV+VCPV Y + + + CI CG C CP Sbjct: 123 AFFVPKLCNQCENPPCVQVCPVGATYATADGVVLVDRKWCIGCGYCIMGCPYG 175 >gi|332296822|ref|YP_004438744.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] gi|332179925|gb|AEE15613.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Treponema brennaborense DSM 12168] Length = 370 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C+ C C + C +I+ D+C+ CG C CP DA+ P + Sbjct: 194 VTQEACVGCG--MCRKNCAHGAITIEAKKASINHDKCVGCGRCIGACPKDAVHPGADHSG 251 Query: 64 ELWLKINSEYAT 75 ++ +N + A Sbjct: 252 DV---LNCKMAE 260 >gi|309389845|gb|ADO77725.1| putative PAS/PAC sensor protein [Halanaerobium praevalens DSM 2228] Length = 592 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD-TEPGLELW 66 +C C C+ CPV +N I ++CI CG C CP A E LE + Sbjct: 28 SCKDC--HKCLRECPVAAIGFKDNQAFIIEEKCIYCGNCIKTCPQGAKSALFEEKKLEAF 85 Query: 67 LK 68 L+ Sbjct: 86 LE 87 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 15/31 (48%) Query: 25 CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C + L + P C DC C ECPV AI Sbjct: 14 CLKKMNETLIVKPASCKDCHKCLRECPVAAI 44 >gi|293374979|ref|ZP_06621274.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] gi|292646389|gb|EFF64404.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] Length = 568 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL-ELW 66 NC C CV CPV I + CI CG+C CP + K +TE + + Sbjct: 10 NCKNC--YACVRACPVQSIKIKNEQAIIMEERCIACGLCLKACPKNVKKIETELEKVKQF 67 Query: 67 LK 68 +K Sbjct: 68 IK 69 >gi|291283740|ref|YP_003500558.1| putative polyferredoxin [Escherichia coli O55:H7 str. CB9615] gi|290763613|gb|ADD57574.1| Putative polyferredoxin [Escherichia coli O55:H7 str. CB9615] gi|320657197|gb|EFX25006.1| putative polyferredoxin [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662803|gb|EFX30135.1| putative polyferredoxin [Escherichia coli O55:H7 str. USDA 5905] Length = 284 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CI+C VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIR 64 >gi|264676201|ref|YP_003276107.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni CNB-2] gi|262206713|gb|ACY30811.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni CNB-2] Length = 433 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRCN--TCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHDDN 42 >gi|213051548|ref|ZP_03344426.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425190|ref|ZP_03357940.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 653 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|206896550|ref|YP_002247823.1| putative pyruvate formate-lyase 3-activating enzyme (PFL-activating enzyme 3) (Formate-C-acetyltransferase-activatingenzyme 3) [Coprothermobacter proteolyticus DSM 5265] gi|206739167|gb|ACI18245.1| putative pyruvate formate-lyase 3-activating enzyme (PFL-activating enzyme 3) (Formate-C-acetyltransferase-activatingenzyme 3) [Coprothermobacter proteolyticus DSM 5265] Length = 306 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C EVCP D + + I +C CGVC CP A Sbjct: 58 CMRCG--TCQEVCPQDALELTQGGVVIDRTQCTRCGVCAHYCPTTA 101 >gi|170765592|ref|ZP_02900403.1| formate hydrogenlyase, subunit B [Escherichia albertii TW07627] gi|170124738|gb|EDS93669.1| formate hydrogenlyase, subunit B [Escherichia albertii TW07627] Length = 203 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNAITRVNGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|11498296|ref|NP_069522.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649926|gb|AAB90550.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 368 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 + V T CI C C+ CP+ N ++ ++C+ CGVC P CP++AI+ Sbjct: 281 LATVDTSRCIACG--ICMLRCPMKAIKAKINREPASVDAEKCLGCGVCVPTCPMEAIELV 338 Query: 59 TEPGL 63 L Sbjct: 339 ERDEL 343 >gi|84623478|ref|YP_450850.1| ferredoxin [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367418|dbj|BAE68576.1| ferredoxin II [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 142 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C+ CPVD G + I P C C +C P CPVD I+ Sbjct: 84 AWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 137 >gi|26250880|ref|NP_756920.1| NrfC protein [Escherichia coli CFT073] gi|91213615|ref|YP_543601.1| NrfC protein [Escherichia coli UTI89] gi|110644424|ref|YP_672154.1| NrfC protein [Escherichia coli 536] gi|117626354|ref|YP_859677.1| formate-dependent nitire reductase subunit NrfC [Escherichia coli APEC O1] gi|191171961|ref|ZP_03033506.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli F11] gi|215489417|ref|YP_002331848.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218561157|ref|YP_002394070.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli S88] gi|218692364|ref|YP_002400576.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ED1a] gi|227886899|ref|ZP_04004704.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli 83972] gi|237703652|ref|ZP_04534133.1| formate-dependent nitrite reductase subunit NrfC [Escherichia sp. 3_2_53FAA] gi|300973868|ref|ZP_07172357.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 45-1] gi|300980240|ref|ZP_07174898.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 200-1] gi|301051420|ref|ZP_07198230.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 185-1] gi|306815806|ref|ZP_07449951.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli NC101] gi|312965680|ref|ZP_07779909.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 2362-75] gi|331660652|ref|ZP_08361584.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA206] gi|26111312|gb|AAN83494.1|AE016771_5 NrfC protein [Escherichia coli CFT073] gi|91075189|gb|ABE10070.1| NrfC protein [Escherichia coli UTI89] gi|110346016|gb|ABG72253.1| NrfC protein [Escherichia coli 536] gi|115515478|gb|ABJ03553.1| formate-dependent nitire reductase subunit NrfC [Escherichia coli APEC O1] gi|190907726|gb|EDV67320.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli F11] gi|215267489|emb|CAS11943.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O127:H6 str. E2348/69] gi|218367926|emb|CAR05723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli S88] gi|218429928|emb|CAR10905.2| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ED1a] gi|222035795|emb|CAP78540.1| Protein nrfC [Escherichia coli LF82] gi|226901564|gb|EEH87823.1| formate-dependent nitrite reductase subunit NrfC [Escherichia sp. 3_2_53FAA] gi|227836040|gb|EEJ46506.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli 83972] gi|294489652|gb|ADE88408.1| 4Fe-4S binding domain protein [Escherichia coli IHE3034] gi|300296950|gb|EFJ53335.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 185-1] gi|300307807|gb|EFJ62327.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 200-1] gi|300410678|gb|EFJ94216.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 45-1] gi|305850781|gb|EFM51237.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli NC101] gi|307556236|gb|ADN49011.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli ABU 83972] gi|307629137|gb|ADN73441.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UM146] gi|312289654|gb|EFR17545.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 2362-75] gi|312948660|gb|ADR29487.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315287909|gb|EFU47311.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 110-3] gi|315294773|gb|EFU54116.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 153-1] gi|315297484|gb|EFU56763.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 16-3] gi|320193444|gb|EFW68081.1| NrfC protein [Escherichia coli WV_060327] gi|323190048|gb|EFZ75326.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli RN587/1] gi|323950368|gb|EGB46249.1| cytochrome c nitrite reductase [Escherichia coli H252] gi|323954449|gb|EGB50233.1| cytochrome c nitrite reductase [Escherichia coli H263] gi|324009516|gb|EGB78735.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 57-2] gi|324015614|gb|EGB84833.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 60-1] gi|331051694|gb|EGI23733.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA206] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|323170275|gb|EFZ55928.1| protein aegA [Escherichia coli LT-68] Length = 604 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 51 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 95 >gi|300787601|ref|YP_003767892.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] gi|299797115|gb|ADJ47490.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] Length = 294 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C C++VCP + E + + D C CG C P CP I Sbjct: 110 SDVCKHCTEAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCIPACPYGVI 160 >gi|258516351|ref|YP_003192573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780056|gb|ACV63950.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 55 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+Y +TE C C C + CP D EG + I ++C +CG C ECP AI + Sbjct: 1 MSYRITEACEACG--TCKDACPNDAIIEG-DIYKIDAEKCAECGACVEECPTGAIVEE 55 >gi|261342154|ref|ZP_05970012.1| electron transport protein HydN [Enterobacter cancerogenus ATCC 35316] gi|288315487|gb|EFC54425.1| electron transport protein HydN [Enterobacter cancerogenus ATCC 35316] Length = 181 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAIKREKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|171058237|ref|YP_001790586.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Leptothrix cholodnii SP-6] gi|170775682|gb|ACB33821.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Leptothrix cholodnii SP-6] Length = 438 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 CI C + CP D G + ++ CI G C+ CP DAI Sbjct: 56 CIGSG--SCTKACPEDALGMVGGKAVLVNASACIGHGACQAACPFDAI 101 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 34 AIHPDECIDCGVCEPECPVDA 54 I P CI G C CP DA Sbjct: 50 VIDPARCIGSGSCTKACPEDA 70 >gi|170765779|ref|ZP_02900590.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] gi|170124925|gb|EDS93856.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] Length = 247 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M+Y+ +C CK C+ CP D + +I +C CG CE CP AI P Sbjct: 1 MSYIDQTSCTGCKV--CLLFCPDDAIEYYDGKCSIDSKQCTLCGCCEGCCPFSAIHP 55 >gi|281358699|ref|ZP_06245176.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] gi|281314825|gb|EFA98861.1| NADH dehydrogenase (quinone) [Victivallis vadensis ATCC BAA-548] Length = 634 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C T C CPV + I D+CI CG C+ C A+ Sbjct: 581 ILASKCKGC--TACARKCPVGAITGKVKEVHVIDADKCIKCGACKAACKFGAV 631 >gi|303258408|ref|ZP_07344411.1| protein NrfC [Burkholderiales bacterium 1_1_47] gi|331000576|ref|ZP_08324245.1| thiosulfate reductase electron transport protein phsb [Parasutterella excrementihominis YIT 11859] gi|302858854|gb|EFL81942.1| protein NrfC [Burkholderiales bacterium 1_1_47] gi|329571247|gb|EGG52943.1| thiosulfate reductase electron transport protein phsb [Parasutterella excrementihominis YIT 11859] Length = 247 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 +C C+ CV VCP + + + PD C+ C C CP + Sbjct: 117 SCQQCQDAPCVRVCPTGAAHRDPKTGIVTMDPDRCVGCKYCIAACPYN 164 >gi|296104198|ref|YP_003614344.1| putative polyferredoxin [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058657|gb|ADF63395.1| putative polyferredoxin [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 291 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 5 VTENCI-----LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT C+ C + CPV F ++ + I CI+CG C CP AI Sbjct: 12 VTHACVRRRFRHASCHACADACPVQAFSFTDSGVLIDDSRCIECGDCLFVCPAGAI 67 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+LC C C L + + C CG CE C AIK Sbjct: 193 CVLCG--ACWRSCQEKAIRFENASLRVETEYCTGCGGCEAVCQHAAIK 238 >gi|289828862|ref|ZP_06546605.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 220 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|189191492|ref|XP_001932085.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973691|gb|EDU41190.1| NADH-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 230 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 187 EGP----------NAEYATETREELLYNKEKLLANGDKWE 216 >gi|156743326|ref|YP_001433455.1| NADH-quinone oxidoreductase subunit I [Roseiflexus castenholzii DSM 13941] gi|156234654|gb|ABU59437.1| NADH-quinone oxidoreductase, chain I [Roseiflexus castenholzii DSM 13941] Length = 165 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF-------------YEGENF---LAIHPDECIDCGVCEPEC 50 E CI C + C CP D GE + I+ CI CG CE C Sbjct: 50 ERCIGC--SLCAAACPADAILVVPAENDPAAPNSPGERYAARYEINMLRCIFCGYCEDAC 107 Query: 51 PVDAIKPDTEPGLELW 66 P +AI + + L + Sbjct: 108 PTNAIVLEHQYELSFY 123 >gi|75906669|ref|YP_320965.1| XRE family transcriptional regulator [Anabaena variabilis ATCC 29413] gi|75700394|gb|ABA20070.1| transcriptional regulator, XRE family [Anabaena variabilis ATCC 29413] Length = 529 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVD 53 M Y + N C+ C +C CP N I P C +C G C CPV Sbjct: 1 MPYTIPNNSCVGCD--NCRPQCPTGAIKIENNKYWIDPSLCNNCEGYYAEPQCVIACPVK 58 Query: 54 AIKP 57 + P Sbjct: 59 SPIP 62 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I + C+ C C P+CP AIK + Sbjct: 3 YTIPNNSCVGCDNCRPQCPTGAIKIENNKYW 33 >gi|117922345|ref|YP_871537.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|117614677|gb|ABK50131.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 553 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEVDPYLCHGAGSCASACPTGAIGYDLPTPQALHSYLNKIINRY 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 >gi|16273571|ref|NP_439826.1| electron transport complex protein RnfB [Haemophilus influenzae Rd KW20] gi|68250288|ref|YP_249400.1| electron transport complex protein RnfB [Haemophilus influenzae 86-028NP] gi|145629224|ref|ZP_01785023.1| electron transport complex protein RnfB [Haemophilus influenzae 22.1-21] gi|145631464|ref|ZP_01787233.1| electron transport complex protein RnfB [Haemophilus influenzae R3021] gi|145633618|ref|ZP_01789345.1| electron transport complex protein RnfB [Haemophilus influenzae 3655] gi|145635460|ref|ZP_01791161.1| electron transport complex protein RnfB [Haemophilus influenzae PittAA] gi|145639160|ref|ZP_01794767.1| electron transport complex protein RnfB [Haemophilus influenzae PittII] gi|148825772|ref|YP_001290525.1| electron transport complex protein RnfB [Haemophilus influenzae PittEE] gi|229845219|ref|ZP_04465352.1| electron transport complex protein RnfB [Haemophilus influenzae 6P18H1] gi|229847305|ref|ZP_04467407.1| electron transport complex protein RnfB [Haemophilus influenzae 7P49H1] gi|260581277|ref|ZP_05849095.1| iron-sulfur cluster binding protein [Haemophilus influenzae RdAW] gi|260582612|ref|ZP_05850401.1| electron transport complex protein RnfB [Haemophilus influenzae NT127] gi|319896879|ref|YP_004135074.1| electron transport complex protein rnfb [Haemophilus influenzae F3031] gi|329123233|ref|ZP_08251801.1| electron transport complex protein RnfB [Haemophilus aegyptius ATCC 11116] gi|6136672|sp|P71396|RNFB_HAEIN RecName: Full=Electron transport complex protein rnfB gi|81335291|sp|Q4QJQ7|RNFB_HAEI8 RecName: Full=Electron transport complex protein rnfB gi|166225084|sp|A5UBJ1|RNFB_HAEIE RecName: Full=Electron transport complex protein rnfB gi|1574536|gb|AAC23330.1| iron-sulfur cluster binding protein [Haemophilus influenzae Rd KW20] gi|68058487|gb|AAX88740.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Haemophilus influenzae 86-028NP] gi|144978727|gb|EDJ88450.1| electron transport complex protein RnfB [Haemophilus influenzae 22.1-21] gi|144982894|gb|EDJ90407.1| electron transport complex protein RnfB [Haemophilus influenzae R3021] gi|144985495|gb|EDJ92311.1| electron transport complex protein RnfB [Haemophilus influenzae 3655] gi|145267334|gb|EDK07337.1| electron transport complex protein RnfB [Haemophilus influenzae PittAA] gi|145271722|gb|EDK11632.1| electron transport complex protein RnfB [Haemophilus influenzae PittII] gi|148715932|gb|ABQ98142.1| electron transport complex protein RnfB [Haemophilus influenzae PittEE] gi|229809730|gb|EEP45454.1| electron transport complex protein RnfB [Haemophilus influenzae 7P49H1] gi|229811814|gb|EEP47510.1| electron transport complex protein RnfB [Haemophilus influenzae 6P18H1] gi|260092104|gb|EEW76049.1| iron-sulfur cluster binding protein [Haemophilus influenzae RdAW] gi|260094284|gb|EEW78183.1| electron transport complex protein RnfB [Haemophilus influenzae NT127] gi|309750740|gb|ADO80724.1| Electron transport complex protein RnfB [Haemophilus influenzae R2866] gi|309972920|gb|ADO96121.1| Electron transport complex protein RnfB [Haemophilus influenzae R2846] gi|317432383|emb|CBY80738.1| Electron transport complex protein RnfB [Haemophilus influenzae F3031] gi|327471442|gb|EGF16890.1| electron transport complex protein RnfB [Haemophilus aegyptius ATCC 11116] Length = 193 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP D I Sbjct: 103 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCI 155 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E I + CI C C CPVDAI Sbjct: 100 EKVAFIDENMCIGCTKCIQACPVDAI 125 >gi|332346076|gb|AEE59410.1| cytochrome c nitrite reductase, Fe-S protein NrfC [Escherichia coli UMNK88] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|331650093|ref|ZP_08351166.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M605] gi|330908407|gb|EGH36926.1| NrfC protein [Escherichia coli AA86] gi|331041038|gb|EGI13195.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M605] Length = 223 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|304314490|ref|YP_003849637.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis str. Marburg] gi|302587949|gb|ADL58324.1| F420-dependent sulfite reductase [Methanothermobacter marburgensis str. Marburg] Length = 690 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V E C C C EVC V+ + D C+ CG C ECP A Sbjct: 560 TVEEICNGCG--RCFEVCKVEAISVRGETSYTNHDLCVGCGKCIRECPHTA 608 >gi|296109957|ref|YP_003616906.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434771|gb|ADG13942.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 252 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C CVE CP+DC Y+ + I D+C+ C +CE CP AIK Sbjct: 193 ELCVGC--MVCVEECPIDCIYDIGGVVEIDNDKCVLCRICEEVCPTKAIK 240 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 10 ILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 I CK C + CPVD + D CI C +C CPVDAI Sbjct: 42 ICCKCNLCYKECPVDAIERAKVKRAVKIKDNCIKCEICAKTCPVDAIF 89 Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C C C VCP + +++ D CI CG CE +CP A+K + E G Sbjct: 126 EKCGKCG--ICAMVCPTKAIKVVRKKSFSVNLDLCIGCGACEEQCPKKAVKVERELG 180 Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 10/62 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI C C E CP E + + + C+ C VC ECP+D I Sbjct: 153 VNLDLCIGCG--ACEEQCPKKAVKVERELGNIYKEGHMEVDKELCVGCMVCVEECPIDCI 210 Query: 56 KP 57 Sbjct: 211 YD 212 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 28/78 (35%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGE------------------------NFLAIHPD 38 + +NCI C+ C + CPVD + EG+ + + Sbjct: 69 IKDNCIKCE--ICAKTCPVDAIFVIEGDVNIKDSKIVLSINKKEVMKRKIRLKNYIFNDE 126 Query: 39 ECIDCGVCEPECPVDAIK 56 +C CG+C CP AIK Sbjct: 127 KCGKCGICAMVCPTKAIK 144 >gi|149374620|ref|ZP_01892394.1| NADH-quinone oxidoreductase, chain I [Marinobacter algicola DG893] gi|149361323|gb|EDM49773.1| NADH-quinone oxidoreductase, chain I [Marinobacter algicola DG893] Length = 182 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVDCISLQKGEQEDGRWYPEFFRINFSRCIFCGMCEEACPTSAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMGEY 127 >gi|305667525|ref|YP_003863812.1| pyridine nucleotide-disulphide oxidoreductase domain-containing protein [Maribacter sp. HTCC2170] gi|88709575|gb|EAR01808.1| Pyridine nucleotide-disulphide oxidoreductase domain protein [Maribacter sp. HTCC2170] Length = 410 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAI 55 Y+ CI C+ CP EN + I+ CI G C CPV+AI Sbjct: 23 PYIDLNECIGSG--ACITACPEKDILGIENGIATVINTSNCIGHGACFHSCPVEAI 76 >gi|115352917|ref|YP_774756.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria AMMD] gi|115282905|gb|ABI88422.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ambifaria AMMD] Length = 88 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MSLMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|93005410|ref|YP_579847.1| NADH dehydrogenase subunit I [Psychrobacter cryohalolentis K5] gi|110287769|sp|Q1QD90|NUOI_PSYCK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|92393088|gb|ABE74363.1| NADH-quinone oxidoreductase, chain I [Psychrobacter cryohalolentis K5] Length = 182 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + + +++ + Y + I+ + Sbjct: 118 MTPDFEMGEYVRQDLVYEKEHLLISGPGKYPD 149 >gi|324112958|gb|EGC06934.1| glutamate synthase [Escherichia fergusonii B253] Length = 636 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 33 CHHCEDAPCARSCPNGAISHVNDSVQVNQQKCIGCKSCVIACPFG 77 >gi|307130992|ref|YP_003883008.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] gi|306528521|gb|ADM98451.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Dickeya dadantii 3937] Length = 196 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V +NCI C T C++ CPVD + + D C C +C P CP D I+ Sbjct: 109 AWVDEDNCIGC--TKCIQACPVDAIVGTTRAVHTVIRDLCTGCNLCVPPCPTDCIE 162 >gi|300704663|ref|YP_003746266.1| 4fe-4S ferredoxin, iron-sulfur binding [Ralstonia solanacearum CFBP2957] gi|299072327|emb|CBJ43661.1| 4Fe-4S ferredoxin, iron-sulphur binding [Ralstonia solanacearum CFBP2957] Length = 268 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP----DTEP 61 E+CI C T C++ CPVD + D C C +C CPVD I Sbjct: 88 EHCIGC--TLCIQACPVDAIVGAPKAMHVVLADWCTGCDLCVAPCPVDCIDMVPVTGERA 145 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 146 GWDAWSQAQADAAR 159 Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 84 VIDPEHCIGCTLCIQACPVDAI 105 >gi|288932668|ref|YP_003436728.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894916|gb|ADC66453.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 160 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C+ +CPV Y E N + + PD CI C C CP AI D + Sbjct: 53 CEHCEEAPCMIICPVKAIYRDEETNAVLLDPDICIGCKQCMVVCPFGAIGFDED 106 >gi|258542714|ref|YP_003188147.1| NADH dehydrogenase subunit I [Acetobacter pasteurianus IFO 3283-01] gi|256633792|dbj|BAH99767.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-01] gi|256636851|dbj|BAI02820.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-03] gi|256639904|dbj|BAI05866.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-07] gi|256642960|dbj|BAI08915.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-22] gi|256646015|dbj|BAI11963.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-26] gi|256649068|dbj|BAI15009.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-32] gi|256652055|dbj|BAI17989.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655112|dbj|BAI21039.1| NADH-quinone oxidoreductase chain I [Acetobacter pasteurianus IFO 3283-12] Length = 162 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C CP + E E I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEATCPAEAITIEAEERDDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 117 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP +AI + E + Sbjct: 61 ERCIACKLCEATCPAEAITIEAEERDD 87 Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG N+ Sbjct: 102 CIYCGL--CEEACPVDAIVEGPNY 123 >gi|167762908|ref|ZP_02435035.1| hypothetical protein BACSTE_01272 [Bacteroides stercoris ATCC 43183] gi|167699248|gb|EDS15827.1| hypothetical protein BACSTE_01272 [Bacteroides stercoris ATCC 43183] Length = 330 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 T CI C CV+VCP + N I P++C C CE CP I P + Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEVCPQGTIIALNFPPRKP 275 Query: 66 WLKINSEYATQWPNITTKKESLPSAAK 92 +E P + + + AAK Sbjct: 276 ----KAEGEAVAPKVAEPVKKVAEAAK 298 Score = 40.1 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 17/50 (34%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVSACQFGAIRMNPETGLPEVDESKCTACGACVKACPRNIIE 189 >gi|158319260|ref|YP_001511767.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139459|gb|ABW17771.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 186 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 V + C C T CV CPV + E+ + + ++CI C C CP A + E Sbjct: 55 VPQLCNHCDETPCVSACPVKATDKSEDGIVFVDREKCIGCFACVGACPYGARIQEEE 111 >gi|332969438|gb|EGK08461.1| ferredoxin [Psychrobacter sp. 1501(2011)] Length = 82 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C VCP D YEGE+ I+PD C +C C CP+D Sbjct: 1 MALMITDECINCDV--CEPVCPNDAIYEGEDIYEINPDLCTECVGHFDEPQCVEICPIDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPHD 62 >gi|325496246|gb|EGC94105.1| electron transporter hydN [Escherichia fergusonii ECD227] Length = 175 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|295102368|emb|CBK99913.1| Fe-S-cluster-containing hydrogenase components 1 [Faecalibacterium prausnitzii L2-6] Length = 214 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 + C C+ C CP E + + D+CI CG C CP Sbjct: 119 DTCRQCEDPACGNACPQKAITTNEQGIRVVDTDKCIGCGACHEACP 164 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 14/56 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-----ECIDCGVCEPECPVDA 54 V T+ CI C C E CP + ++P+ +CI CG C CP A Sbjct: 148 VDTDKCIGCG--ACHEACPW-------HMPTVNPETGKSSKCIACGACVAGCPSGA 194 >gi|213619202|ref|ZP_03373028.1| formate hydrogenlyase subunit 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 143 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|206890760|ref|YP_002249173.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A, selenocysteine-containing [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742698|gb|ACI21755.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A, selenocysteine-containing [Thermodesulfovibrio yellowstonii DSM 11347] Length = 666 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C C CV +CP Y+G+ I P C CGVC CP AIK + Sbjct: 596 DKCSSCGV--CVPLCPYSAIRIEEYKGKEKAYIEPALCAGCGVCASACPSRAIKFNGFTT 653 Query: 63 LELWLKINS 71 ++ +I++ Sbjct: 654 EQIMAQIDA 662 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIK-PDTEPGLELWLK 68 + D+C CGVC P CP AI+ + + + +++ Sbjct: 592 EVDRDKCSSCGVCVPLCPYSAIRIEEYKGKEKAYIE 627 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 11/18 (61%) Query: 34 AIHPDECIDCGVCEPECP 51 I D+CI CGVC CP Sbjct: 238 YIDWDKCIGCGVCTEICP 255 >gi|149201260|ref|ZP_01878235.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] gi|149145593|gb|EDM33619.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Roseovarius sp. TM1035] Length = 260 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 87 SCLHCDDAPCVTVCPTGASYKRVEDGIVLVNETDCIGCGLCAWACPYGAREMDQAEG 143 >gi|149194896|ref|ZP_01871990.1| ferredoxin [Caminibacter mediatlanticus TB-2] gi|149135055|gb|EDM23537.1| ferredoxin [Caminibacter mediatlanticus TB-2] Length = 84 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + E CI C CV+ CP G+ I PD C +C C CPVDA Sbjct: 1 MSLKINEECIACD--ACVDECPNGAIEPGDPIYEIDPDLCTECIEYGGEPQCVQVCPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|89902847|ref|YP_525318.1| hydrogenase 2 protein HybA [Rhodoferax ferrireducens T118] gi|89347584|gb|ABD71787.1| Twin-arginine translocation pathway signal [Rhodoferax ferrireducens T118] Length = 331 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C+ C CV CPV +A P C+ C C CP Sbjct: 114 SCMHCADPSCVSACPVSAMTKDPATGIVAYDPGACVGCRYCVVACPFG 161 >gi|74313277|ref|YP_311696.1| electron transport protein HydN [Shigella sonnei Ss046] gi|73856754|gb|AAZ89461.1| involved in electron transport from formate to hydrogen, Fe-S centers [Shigella sonnei Ss046] Length = 175 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|15678133|ref|NP_275248.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] gi|2621136|gb|AAB84604.1| glutamate synthase (NADPH), alpha subunit [Methanothermobacter thermautotrophicus str. Delta H] Length = 622 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C+ C C VCP D E+ I +CI CG C CPV Sbjct: 170 CVFCG--TCEIVCPTDAIKIVEDHAEIDKTKCIMCGSCLAACPV 211 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 19/52 (36%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C C D + I + C+ C +C CP+ AI E Sbjct: 48 CQQCVDPSCARGCFRDAIRRENGAVKIDQESCVGCKLCMLMCPIGAITYTDE 99 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECI----DCGVCEPEC 50 E+C+ CK C+ +CP+ + + +CI D C C Sbjct: 77 ESCVGCKL--CMLMCPIGAITYTDEGMVKCDQQCIEKPGDTPACVAAC 122 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/17 (64%), Positives = 12/17 (70%) Query: 40 CIDCGVCEPECPVDAIK 56 C+ CG CE CP DAIK Sbjct: 170 CVFCGTCEIVCPTDAIK 186 >gi|194432997|ref|ZP_03065280.1| 4Fe-4S binding domain protein [Shigella dysenteriae 1012] gi|194418724|gb|EDX34810.1| 4Fe-4S binding domain protein [Shigella dysenteriae 1012] gi|332088583|gb|EGI93696.1| protein aegA domain protein [Shigella dysenteriae 155-74] Length = 175 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|331681003|ref|ZP_08381640.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H299] gi|331081224|gb|EGI52385.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H299] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|293415783|ref|ZP_06658426.1| polyferredoxin [Escherichia coli B185] gi|291433431|gb|EFF06410.1| polyferredoxin [Escherichia coli B185] Length = 284 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CI+C VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIR 64 >gi|282856353|ref|ZP_06265632.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] gi|282585724|gb|EFB91013.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] Length = 649 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C+ CP F E I P +C+ C VC CP AI Sbjct: 597 CIGCK--KCLSTGCPALSFDTRERKAVIDPMQCVGCTVCAQVCPRQAI 642 >gi|242281209|ref|YP_002993338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242124103|gb|ACS81799.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 139 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHP-DECIDCGVCEPECPVDAIKPDTEP 61 V + C+ C C EVCP + IH D CI CG C CPVDAI D + Sbjct: 49 FVAKVCMACSPAPCAEVCPTGAMRGRKKGGGVIHKKDLCIRCGKCAEACPVDAIYLDLKD 108 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C C E CPVD Y L P CI CG C CP + ++ Sbjct: 85 DLCIRCG--KCAEACPVDAIYLD---LKDRPYVCIHCGRCVEFCPHECLE 129 >gi|225713986|gb|ACO12839.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Lepeophtheirus salmonis] Length = 203 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 102 ERCIACKL--CEAICPAQAITIEAEERSDGARRTTRYDIDMTKCIYCGLCQEACPVDAI 158 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 102 ERCIACKLCEAICPAQAITIEAEE 125 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 143 CIYCGL--CQEACPVDAIVEGPNF 164 >gi|194445567|ref|YP_002041785.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404230|gb|ACF64452.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 287 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIVAVRCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDN 213 >gi|297537625|ref|YP_003673394.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Methylotenera sp. 301] gi|297256972|gb|ADI28817.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Methylotenera sp. 301] Length = 435 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 C CV+ CP + P CI G C CPV+AIK Sbjct: 59 CGSGACVKACPEKALSLINGKAVLTDPTHCIGHGACLEACPVEAIK 104 >gi|325680883|ref|ZP_08160420.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324107347|gb|EGC01626.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 405 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 V ++C C + C+ CP DC EG ++ +CIDCG C CPV Sbjct: 7 VKKDCCGC--SACMNSCPKDCIKMKPDKEGFSYPVTDAAKCIDCGRCTKVCPV 57 >gi|262376770|ref|ZP_06069998.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter lwoffii SH145] gi|262308480|gb|EEY89615.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter lwoffii SH145] Length = 180 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L +++ + Y + I+ + Sbjct: 116 MTPDFELGEYVRQDLVYEKEHLLISGPGKYPD 147 >gi|260868162|ref|YP_003234564.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli O111:H- str. 11128] gi|257764518|dbj|BAI36013.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O111:H- str. 11128] Length = 239 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|170769899|ref|ZP_02904352.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia albertii TW07627] gi|170121193|gb|EDS90124.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia albertii TW07627] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|154498291|ref|ZP_02036669.1| hypothetical protein BACCAP_02280 [Bacteroides capillosus ATCC 29799] gi|150272838|gb|EDN00007.1| hypothetical protein BACCAP_02280 [Bacteroides capillosus ATCC 29799] Length = 503 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V E C C C + CP+D + E + ++C +CGVC C AI E Sbjct: 1 MVIVNLEACKGC--MICEKNCPLDAVHVVERKAVVDAEKCCECGVCTRVCKFGAISKPAE 58 >gi|152989151|ref|YP_001347023.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PA7] gi|166991043|sp|A6V1T8|RNFB_PSEA7 RecName: Full=Electron transport complex protein rnfB gi|150964309|gb|ABR86334.1| probable ferredoxin [Pseudomonas aeruginosa PA7] Length = 188 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ + Sbjct: 106 AYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMREI 163 Query: 60 EPGLELW 66 P + W Sbjct: 164 APDVRHW 170 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 P+D E I ECI C C CPVDAI Sbjct: 94 PLDAAEETPPRVAYIREAECIGCTKCIQACPVDAI 128 >gi|29654985|ref|NP_820677.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Coxiella burnetii RSA 493] gi|154707199|ref|YP_001423730.1| electron transport complex protein [Coxiella burnetii Dugway 5J108-111] gi|161830706|ref|YP_001597520.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 331] gi|29542254|gb|AAO91191.1| electron transport complex protein [Coxiella burnetii RSA 493] gi|154356485|gb|ABS77947.1| electron transport complex protein [Coxiella burnetii Dugway 5J108-111] gi|161762573|gb|ABX78215.1| electron transport complex, RnfABCDGE type, B subunit [Coxiella burnetii RSA 331] Length = 213 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V + CI C T C++ CP D + + D C C +C P CPVD I Sbjct: 81 AFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCIDMKII 138 Query: 61 PGLELWLKINSEYATQWPNITTKK 84 L K + A QW + KK Sbjct: 139 APLTPHEK--KQKAQQWRSRYEKK 160 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 110 MHTVITDACTGCEL--CLPPCPVDCI 133 >gi|16762960|ref|NP_458577.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144447|ref|NP_807789.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213021319|ref|ZP_03335766.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213163055|ref|ZP_03348765.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427238|ref|ZP_03359988.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622746|ref|ZP_03375529.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647382|ref|ZP_03377435.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859692|ref|ZP_03385396.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25285334|pir||AF1020 cytochrome c-type biogenesis protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505267|emb|CAD09263.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140085|gb|AAO71649.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|301156415|emb|CBW15886.1| formate hydrogenlyase subunit 2 (fhl subunit 2) (hydrogenase-3 component b) [Haemophilus parainfluenzae T3T1] Length = 199 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C VCPV + + ++ CI C +C CP AI Sbjct: 51 CRHCDDSPCATVCPVHAITHINDTIQLNESLCIGCKLCGIACPFGAI 97 >gi|145591121|ref|YP_001153123.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282889|gb|ABP50471.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 373 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V E C LC CV VCP D + L + P CI CGVC +CP I+ +P Sbjct: 255 VKEGCTLCG--ACVNVCPTDALSIKGHELRLVPALCIACGVCAEKCPEGVIEIRQQPEKR 312 Query: 65 LW 66 + Sbjct: 313 PY 314 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C C CP F E + + D C+DCG+C CPVDAIK + P Sbjct: 85 DKCIWCGL--CAGYCPASAFEYVERAVVRVKYDLCVDCGLCNSVCPVDAIKMPSLPD 139 >gi|53725521|ref|YP_103524.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76812165|ref|YP_332747.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|52428944|gb|AAU49537.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 23344] gi|76581618|gb|ABA51093.1| electron transport complex, RnfABCDGE type, B subunit subfamily, putative [Burkholderia pseudomallei 1710b] Length = 316 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 106 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 158 >gi|187733852|ref|YP_001882767.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii CDC 3083-94] gi|187430844|gb|ACD10118.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii CDC 3083-94] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|193063017|ref|ZP_03044109.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E22] gi|194426867|ref|ZP_03059420.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B171] gi|260846866|ref|YP_003224644.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O103:H2 str. 12009] gi|192931276|gb|EDV83878.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E22] gi|194415203|gb|EDX31472.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B171] gi|257762013|dbj|BAI33510.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O103:H2 str. 12009] gi|323162159|gb|EFZ48024.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E128010] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|15804664|ref|NP_290705.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 EDL933] gi|15834308|ref|NP_313081.1| NrfC [Escherichia coli O157:H7 str. Sakai] gi|16131898|ref|NP_418496.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|24115338|ref|NP_709848.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 301] gi|30064661|ref|NP_838832.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 2457T] gi|74314565|ref|YP_312984.1| formate-dependent nitrite reductase [Shigella sonnei Ss046] gi|82546416|ref|YP_410363.1| formate-dependent nitrite reductase complex Fe-S centers [Shigella boydii Sb227] gi|89110793|ref|AP_004573.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. W3110] gi|110807909|ref|YP_691429.1| formate-dependent nitrite reductase [Shigella flexneri 5 str. 8401] gi|157157837|ref|YP_001465576.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E24377A] gi|157163542|ref|YP_001460860.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli HS] gi|168748075|ref|ZP_02773097.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4113] gi|168755247|ref|ZP_02780254.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4401] gi|168760926|ref|ZP_02785933.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4501] gi|168766336|ref|ZP_02791343.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4486] gi|168774435|ref|ZP_02799442.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4196] gi|168780489|ref|ZP_02805496.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4076] gi|168784693|ref|ZP_02809700.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC869] gi|168798260|ref|ZP_02823267.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC508] gi|170021929|ref|YP_001726883.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli ATCC 8739] gi|170083526|ref|YP_001732846.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|188495798|ref|ZP_03003068.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 53638] gi|191168764|ref|ZP_03030541.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B7A] gi|194432233|ref|ZP_03064521.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 1012] gi|195935857|ref|ZP_03081239.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. EC4024] gi|208808344|ref|ZP_03250681.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4206] gi|208811978|ref|ZP_03253307.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4045] gi|208819115|ref|ZP_03259435.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4042] gi|209396255|ref|YP_002273613.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4115] gi|209921558|ref|YP_002295642.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE11] gi|217325897|ref|ZP_03441981.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. TW14588] gi|218556630|ref|YP_002389544.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI1] gi|218697781|ref|YP_002405448.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli 55989] gi|218707694|ref|YP_002415213.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UMN026] gi|238903181|ref|YP_002928977.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BW2952] gi|253775300|ref|YP_003038131.1| cytochrome C nitrite reductase, Fe-S protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164007|ref|YP_003047115.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli B str. REL606] gi|254796092|ref|YP_003080929.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. TW14359] gi|256019721|ref|ZP_05433586.1| formate-dependent nitrite reductase, 4Fe4S subunit [Shigella sp. D9] gi|256024946|ref|ZP_05438811.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia sp. 4_1_40B] gi|260858182|ref|YP_003232073.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O26:H11 str. 11368] gi|260870831|ref|YP_003237233.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O111:H- str. 11128] gi|261225191|ref|ZP_05939472.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261255557|ref|ZP_05948090.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291285489|ref|YP_003502307.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. CB9615] gi|293402711|ref|ZP_06646808.1| cytochrome c nitrite reductase [Escherichia coli FVEC1412] gi|293407806|ref|ZP_06651646.1| cytochrome c nitrite reductase [Escherichia coli B354] gi|293417577|ref|ZP_06660199.1| cytochrome c nitrite reductase [Escherichia coli B185] gi|293476377|ref|ZP_06664785.1| cytochrome c nitrite reductase [Escherichia coli B088] gi|298378240|ref|ZP_06988124.1| formate-dependent nitrite reductase [Escherichia coli FVEC1302] gi|300817994|ref|ZP_07098207.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 107-1] gi|300824670|ref|ZP_07104777.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 119-7] gi|300897486|ref|ZP_07115904.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 198-1] gi|300906393|ref|ZP_07124091.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 84-1] gi|300916948|ref|ZP_07133648.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 115-1] gi|300930495|ref|ZP_07145894.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 187-1] gi|300946659|ref|ZP_07160916.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 116-1] gi|300957506|ref|ZP_07169716.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 175-1] gi|301019230|ref|ZP_07183426.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 196-1] gi|301021611|ref|ZP_07185607.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 69-1] gi|301302762|ref|ZP_07208891.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 124-1] gi|301645068|ref|ZP_07245030.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 146-1] gi|307140763|ref|ZP_07500119.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli H736] gi|307312086|ref|ZP_07591723.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli W] gi|309795881|ref|ZP_07690295.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 145-7] gi|312974130|ref|ZP_07788301.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1827-70] gi|331644815|ref|ZP_08345932.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H736] gi|331655895|ref|ZP_08356883.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M718] gi|331665744|ref|ZP_08366638.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA143] gi|331670938|ref|ZP_08371772.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA271] gi|331680203|ref|ZP_08380862.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H591] gi|332280856|ref|ZP_08393269.1| nrfC [Shigella sp. D9] gi|77416666|sp|P0AAK8|NRFC_ECO57 RecName: Full=Protein nrfC; Flags: Precursor gi|77416667|sp|P0AAK7|NRFC_ECOLI RecName: Full=Protein nrfC; Flags: Precursor gi|77416668|sp|P0AAK9|NRFC_SHIFL RecName: Full=Protein nrfC; Flags: Precursor gi|12519029|gb|AAG59270.1|AE005640_4 formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. EDL933] gi|404304|emb|CAA51043.1| nrfC [Escherichia coli] gi|2367345|gb|AAC77042.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. MG1655] gi|13364531|dbj|BAB38477.1| formate-dependent nitrite reductase NrfC [Escherichia coli O157:H7 str. Sakai] gi|24054641|gb|AAN45555.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 301] gi|30042920|gb|AAP18643.1| formate-dependent nitrite reductase [Shigella flexneri 2a str. 2457T] gi|73858042|gb|AAZ90749.1| formate-dependent nitrite reductase [Shigella sonnei Ss046] gi|81247827|gb|ABB68535.1| formate-dependent nitrite reductase complex Fe-S centers [Shigella boydii Sb227] gi|85676824|dbj|BAE78074.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K12 substr. W3110] gi|110617457|gb|ABF06124.1| NrfC protein [Shigella flexneri 5 str. 8401] gi|157069222|gb|ABV08477.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli HS] gi|157079867|gb|ABV19575.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E24377A] gi|169756857|gb|ACA79556.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli ATCC 8739] gi|169891361|gb|ACB05068.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli str. K-12 substr. DH10B] gi|187769817|gb|EDU33661.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4196] gi|188017384|gb|EDU55506.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4113] gi|188490997|gb|EDU66100.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 53638] gi|189001818|gb|EDU70804.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4076] gi|189357547|gb|EDU75966.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4401] gi|189364249|gb|EDU82668.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4486] gi|189368569|gb|EDU86985.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4501] gi|189374793|gb|EDU93209.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC869] gi|189379215|gb|EDU97631.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC508] gi|190901191|gb|EDV60963.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli B7A] gi|194419436|gb|EDX35517.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 1012] gi|208728145|gb|EDZ77746.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4206] gi|208733255|gb|EDZ81942.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4045] gi|208739238|gb|EDZ86920.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4042] gi|209157655|gb|ACI35088.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. EC4115] gi|209751068|gb|ACI73841.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751070|gb|ACI73842.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751072|gb|ACI73843.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751074|gb|ACI73844.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209751076|gb|ACI73845.1| formate-dependent nitrite reductase NrfC [Escherichia coli] gi|209914817|dbj|BAG79891.1| formate-dependent nitrite reductase nrfC subunit [Escherichia coli SE11] gi|217322118|gb|EEC30542.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli O157:H7 str. TW14588] gi|218354513|emb|CAV01381.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli 55989] gi|218363399|emb|CAR01052.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI1] gi|218434791|emb|CAR15723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli UMN026] gi|238861138|gb|ACR63136.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BW2952] gi|242379599|emb|CAQ34421.1| formate-dependent nitrite reductase, 4Fe-4S subunit, subunit of nitrite reductase complex [Escherichia coli BL21(DE3)] gi|253326344|gb|ACT30946.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975908|gb|ACT41579.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli B str. REL606] gi|253980064|gb|ACT45734.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli BL21(DE3)] gi|254595492|gb|ACT74853.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli O157:H7 str. TW14359] gi|257756831|dbj|BAI28333.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O26:H11 str. 11368] gi|257767187|dbj|BAI38682.1| formate-dependent nitrite reductase NrfC, 4Fe4S subunit [Escherichia coli O111:H- str. 11128] gi|260451098|gb|ACX41520.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli DH1] gi|281603444|gb|ADA76428.1| putative Fe-S-cluster-containing hydrogenase components 1 [Shigella flexneri 2002017] gi|290765362|gb|ADD59323.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. CB9615] gi|291320830|gb|EFE60272.1| cytochrome c nitrite reductase [Escherichia coli B088] gi|291429626|gb|EFF02640.1| cytochrome c nitrite reductase [Escherichia coli FVEC1412] gi|291430295|gb|EFF03293.1| cytochrome c nitrite reductase [Escherichia coli B185] gi|291472057|gb|EFF14539.1| cytochrome c nitrite reductase [Escherichia coli B354] gi|298280574|gb|EFI22075.1| formate-dependent nitrite reductase [Escherichia coli FVEC1302] gi|299882331|gb|EFI90542.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 196-1] gi|300315756|gb|EFJ65540.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 175-1] gi|300358761|gb|EFJ74631.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 198-1] gi|300397952|gb|EFJ81490.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 69-1] gi|300401841|gb|EFJ85379.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 84-1] gi|300415776|gb|EFJ99086.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 115-1] gi|300453638|gb|EFK17258.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 116-1] gi|300461629|gb|EFK25122.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 187-1] gi|300522853|gb|EFK43922.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 119-7] gi|300529404|gb|EFK50466.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 107-1] gi|300841982|gb|EFK69742.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 124-1] gi|301076634|gb|EFK91440.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 146-1] gi|306907893|gb|EFN38394.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli W] gi|308120542|gb|EFO57804.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 145-7] gi|309704540|emb|CBJ03889.1| cytochrome c-type biogenesis protein [Escherichia coli ETEC H10407] gi|310331664|gb|EFP98920.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1827-70] gi|313648724|gb|EFS13164.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2a str. 2457T] gi|315063396|gb|ADT77723.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli W] gi|315138627|dbj|BAJ45786.1| formate-dependent nitrite reductase 4Fe-4S subunit [Escherichia coli DH1] gi|315254754|gb|EFU34722.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 85-1] gi|315617447|gb|EFU98053.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 3431] gi|320174437|gb|EFW49581.1| NrfC protein [Shigella dysenteriae CDC 74-1112] gi|320183144|gb|EFW58004.1| NrfC protein [Shigella flexneri CDC 796-83] gi|320190799|gb|EFW65449.1| NrfC protein [Escherichia coli O157:H7 str. EC1212] gi|320200794|gb|EFW75380.1| NrfC protein [Escherichia coli EC4100B] gi|320638829|gb|EFX08475.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. G5101] gi|320644197|gb|EFX13262.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H- str. 493-89] gi|320649516|gb|EFX18040.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H- str. H 2687] gi|320654912|gb|EFX22873.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660418|gb|EFX27879.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O55:H7 str. USDA 5905] gi|320665689|gb|EFX32726.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli O157:H7 str. LSU-61] gi|323155881|gb|EFZ42049.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli EPECa14] gi|323164520|gb|EFZ50321.1| cytochrome c nitrite reductase, Fe-S protein [Shigella sonnei 53G] gi|323171496|gb|EFZ57142.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli LT-68] gi|323175963|gb|EFZ61555.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1180] gi|323182179|gb|EFZ67589.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli 1357] gi|323380540|gb|ADX52808.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli KO11] gi|323935563|gb|EGB31894.1| cytochrome c nitrite reductase [Escherichia coli E1520] gi|323940256|gb|EGB36449.1| cytochrome c nitrite reductase [Escherichia coli E482] gi|323946206|gb|EGB42240.1| cytochrome c nitrite reductase [Escherichia coli H120] gi|323960438|gb|EGB56072.1| cytochrome c nitrite reductase [Escherichia coli H489] gi|323965736|gb|EGB61188.1| cytochrome c nitrite reductase [Escherichia coli M863] gi|323969791|gb|EGB65072.1| cytochrome c nitrite reductase [Escherichia coli TA007] gi|323975292|gb|EGB70395.1| cytochrome c nitrite reductase [Escherichia coli TW10509] gi|324017129|gb|EGB86348.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 117-3] gi|324118645|gb|EGC12537.1| cytochrome c nitrite reductase [Escherichia coli E1167] gi|326341879|gb|EGD65662.1| NrfC protein [Escherichia coli O157:H7 str. 1125] gi|326346547|gb|EGD70281.1| NrfC protein [Escherichia coli O157:H7 str. 1044] gi|327250419|gb|EGE62132.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli STEC_7v] gi|331035790|gb|EGI08028.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H736] gi|331046249|gb|EGI18339.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli M718] gi|331056795|gb|EGI28789.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA143] gi|331061852|gb|EGI33777.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli TA271] gi|331071666|gb|EGI43002.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli H591] gi|332083567|gb|EGI88787.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii 5216-82] gi|332084228|gb|EGI89431.1| cytochrome c nitrite reductase, Fe-S protein [Shigella dysenteriae 155-74] gi|332087818|gb|EGI92944.1| cytochrome c nitrite reductase, Fe-S protein [Shigella boydii 3594-74] gi|332103208|gb|EGJ06554.1| nrfC [Shigella sp. D9] gi|332752191|gb|EGJ82583.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-671] gi|332753277|gb|EGJ83658.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2747-71] gi|332764783|gb|EGJ95012.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 2930-71] gi|333011118|gb|EGK30532.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-272] gi|333012690|gb|EGK32070.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-227] gi|333014265|gb|EGK33621.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-304] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|310659230|ref|YP_003936951.1| indolepyruvate ferredoxin oxidoreductase [Clostridium sticklandii DSM 519] gi|308826008|emb|CBH22046.1| Indolepyruvate ferredoxin oxidoreductase [Clostridium sticklandii] Length = 600 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCF--YEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 YV CI CK C++ CP YEG L +I ++C+ C +C CPV+AIK Sbjct: 532 YVDPNICIGCK--TCIKTNCPPLRMKKYEGIEKLKSSIDKNQCVGCSICAQVCPVNAIK 588 >gi|331653947|ref|ZP_08354948.1| putative polyferredoxin [Escherichia coli M718] gi|331048796|gb|EGI20872.1| putative polyferredoxin [Escherichia coli M718] Length = 284 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP E +A+ ++CI+C VC+ CP +AI+ Sbjct: 23 HACVEACPAQALTLTEEGIAVDAEQCIECAVCQFICPQEAIR 64 >gi|303248865|ref|ZP_07335114.1| Fe-S cluster domain protein [Desulfovibrio fructosovorans JJ] gi|302489734|gb|EFL49667.1| Fe-S cluster domain protein [Desulfovibrio fructosovorans JJ] Length = 582 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C C C+ CPV + P+ CI CG C CP A Sbjct: 8 YTIETECQDC--YRCLRHCPVKAIQVENGRATVVPELCIACGQCVAACPAHA 57 >gi|300924342|ref|ZP_07140319.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 182-1] gi|301330549|ref|ZP_07223159.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 78-1] gi|300419432|gb|EFK02743.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 182-1] gi|300843501|gb|EFK71261.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 78-1] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|269140245|ref|YP_003296946.1| electron transport protein [Edwardsiella tarda EIB202] gi|267985906|gb|ACY85735.1| electron transport protein [Edwardsiella tarda EIB202] gi|304560075|gb|ADM42739.1| Electron transport protein HydN [Edwardsiella tarda FL6-60] Length = 180 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C VCP ++F+ + ++CI C C CP Sbjct: 58 CRQCEDAPCANVCPNGAISRQQDFICVDQEKCIGCKTCVVACPYG 102 >gi|261343672|ref|ZP_05971317.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rustigianii DSM 4541] gi|282568055|gb|EFB73590.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rustigianii DSM 4541] Length = 204 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 18 VEVCPVDCFYEGENFL----AIHPDECIDCGVCEPECPVDAI 55 V+ P+D +N + I + CI C C CPVDAI Sbjct: 91 VDPQPIDGDENAQNPVRKVAVIDEENCIGCTKCIQACPVDAI 132 >gi|197283983|ref|YP_002149855.1| hypothetical protein PMI0070 [Proteus mirabilis HI4320] gi|227358148|ref|ZP_03842489.1| oxidoreductase, Fe-S subunit [Proteus mirabilis ATCC 29906] gi|194681470|emb|CAR40309.1| putative oxidoreductase, Fe-S subunit [Proteus mirabilis HI4320] gi|227161484|gb|EEI46521.1| oxidoreductase, Fe-S subunit [Proteus mirabilis ATCC 29906] Length = 209 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T+ C CK +C+ VCPV E F + + CI C C CP Sbjct: 121 TDTCRQCKTPECMNVCPVKAIRYQEEFGCIVVDTRRCIGCAACTTACP 168 >gi|91213088|ref|YP_543074.1| putative electron transport protein YsaA [Escherichia coli UTI89] gi|117625856|ref|YP_859179.1| putative electron transport protein YsaA [Escherichia coli APEC O1] gi|237703345|ref|ZP_04533826.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074662|gb|ABE09543.1| putative electron transport protein YsaA [Escherichia coli UTI89] gi|115514980|gb|ABJ03055.1| putative electron transport protein YsaA [Escherichia coli APEC O1] gi|226902609|gb|EEH88868.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 159 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 53 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 107 >gi|396407|gb|AAC43166.1| ORF_o223 [Escherichia coli str. K-12 substr. MG1655] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|62181094|ref|YP_217511.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128727|gb|AAX66430.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715581|gb|EFZ07152.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 287 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|15668380|ref|NP_247176.1| 4Fe-4S iron-sulfur protein [Methanocaldococcus jannaschii DSM 2661] gi|2494448|sp|Q57661|Y208_METJA RecName: Full=Uncharacterized protein MJ0208 gi|1498983|gb|AAB98191.1| 4Fe-4S iron-sulfur protein [Methanocaldococcus jannaschii DSM 2661] Length = 246 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQW 77 + VCP + +NF+ I +C+ CG C+ CP +AI E + + KI++E + Sbjct: 166 INVCPNGAIVKRDNFVEILLSKCLGCGNCKKVCPYNAIIEGKEIKMRVR-KIDAENTRKL 224 Query: 78 P 78 Sbjct: 225 M 225 >gi|325972135|ref|YP_004248326.1| NADH dehydrogenase (quinone) [Spirochaeta sp. Buddy] gi|324027373|gb|ADY14132.1| NADH dehydrogenase (quinone) [Spirochaeta sp. Buddy] Length = 595 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +Y + E CI C T C CPV E + I CI CGVC C A++ Sbjct: 539 SYTINAEKCIGC--TACARKCPVAAISGERKQVHVIDQSICIKCGVCMETCKFGAVE 593 Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 I+ ++CI C C +CPV AI + Sbjct: 540 YTINAEKCIGCTACARKCPVAAISGE 565 >gi|310828225|ref|YP_003960582.1| RnfB [Eubacterium limosum KIST612] gi|308739959|gb|ADO37619.1| RnfB [Eubacterium limosum KIST612] Length = 347 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI CK CV+VCP + N +I+ D+C C C +CP AI + Sbjct: 217 CIACK--ACVKVCPAEAITVENNLASINYDKCTQCQACFEKCPTGAITLE 264 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CV C G+N L + D+C CG C CP I Sbjct: 148 CVSACMFGALSIGDNGLPEVDVDKCTACGKCRDACPKGII 187 >gi|284924166|emb|CBG37266.1| cytochrome c-type biogenesis protein [Escherichia coli 042] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|296110016|ref|YP_003616965.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus infernus ME] gi|295434830|gb|ADG14001.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Methanocaldococcus infernus ME] Length = 613 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +NC C C EVC ++C Y ++ + + CI CG C CP +A + E G Sbjct: 491 VNDNCNGCG--RCYEVCKLECIYIRGSYSYTNYNICIGCGKCIKACPNEA-REVLEEGYI 547 Query: 65 LWL 67 +++ Sbjct: 548 MYI 550 >gi|255942799|ref|XP_002562168.1| Pc18g03280 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586901|emb|CAP94552.1| Pc18g03280 [Penicillium chrysogenum Wisconsin 54-1255] Length = 220 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 119 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 176 Query: 57 PDTEPGLELWLKINSEYATQ 76 + N+EYAT+ Sbjct: 177 ETS----------NAEYATE 186 >gi|204929112|ref|ZP_03220255.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321656|gb|EDZ06855.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613670|gb|EFY10610.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620241|gb|EFY17110.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623287|gb|EFY20128.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630492|gb|EFY27261.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632831|gb|EFY29576.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638836|gb|EFY35530.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640343|gb|EFY37002.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647151|gb|EFY43650.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648978|gb|EFY45421.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653884|gb|EFY50208.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660991|gb|EFY57220.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663068|gb|EFY59275.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668513|gb|EFY64668.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673352|gb|EFY69455.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679138|gb|EFY75192.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683233|gb|EFY79248.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685897|gb|EFY81887.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195184|gb|EFZ80365.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198752|gb|EFZ83852.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202396|gb|EFZ87439.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209219|gb|EFZ94155.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209798|gb|EFZ94721.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216124|gb|EGA00854.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220676|gb|EGA05123.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223729|gb|EGA08036.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231335|gb|EGA15449.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232573|gb|EGA16670.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240984|gb|EGA25024.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245597|gb|EGA29592.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247627|gb|EGA31576.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251070|gb|EGA34944.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257468|gb|EGA41159.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263361|gb|EGA46895.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266320|gb|EGA49809.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271464|gb|EGA54886.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 192 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPFQ 109 >gi|148656359|ref|YP_001276564.1| NADH-quinone oxidoreductase subunit I [Roseiflexus sp. RS-1] gi|148568469|gb|ABQ90614.1| NADH-quinone oxidoreductase, chain I [Roseiflexus sp. RS-1] Length = 165 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCF-------------YEGENF---LAIHPDECIDCGVCEPEC 50 E CI C + C CP D GE + I+ CI CG CE C Sbjct: 50 ERCIGC--SLCAAACPADAILVVPAENDPAAPHSPGERYAERYEINMLRCIFCGYCEDAC 107 Query: 51 PVDAIKPDTEPGLELW 66 P +AI + + L + Sbjct: 108 PTNAIVLEHQYELSFY 123 >gi|15678433|ref|NP_275548.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2621468|gb|AAB84911.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 261 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VT+ C C C CP + + CI CG C CP DA++ + E G Sbjct: 138 VTDRCTACG--TCTRFCPTGAIQLDKEIAVVDESICIGCGACVNVCPSDAVELERELG 193 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 10/59 (16%) Query: 9 CILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CI C CV VCP D L + D C++C VCE CP AI+ + Sbjct: 171 CIGCG--ACVNVCPSDAVELERELGPVIETRRLLVDQDACVECLVCEENCPTGAIRIED 227 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + C+ C C E CP + + + D+CI C VC CPV A+K + Sbjct: 203 VDQDACVECLV--CEENCPTGAIRIEDGEVVVDKDKCILCEVCSTRCPVAALKLERLADE 260 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 +T C+ C C E CPVD E + A D C+ C +C CPV I Sbjct: 54 ITPKCVRCNL--CFEECPVDAISESSASKPARILDNCVKCEICAQTCPVRCI 103 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 27/81 (33%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-------------------------DE 39 + +NC+ C+ C + CPV C E+ I D Sbjct: 84 ILDNCVKCE--ICAQTCPVRCINVVESTATIGDEDVTYNLEYVRIPHRLLRMKNIEVTDR 141 Query: 40 CIDCGVCEPECPVDAIKPDTE 60 C CG C CP AI+ D E Sbjct: 142 CTACGTCTRFCPTGAIQLDKE 162 >gi|20092251|ref|NP_618326.1| sulfite reductase, beta subunit [Methanosarcina acetivorans C2A] gi|19917487|gb|AAM06806.1| sulfite reductase, beta subunit [Methanosarcina acetivorans C2A] Length = 288 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ENC+ CK C + C V ++ + I ++CI CG C C DA++ + Sbjct: 169 ENCVGCKL--CEKACKVGAITVLDDKIRIDLEKCILCGACIAACRKDALRAE 218 Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 8/51 (15%) Query: 18 VEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V CP C EN I + C+ C +CE C V AI + Sbjct: 141 VTGCPAACVRPQENDFGVMGTVKPEILEENCVGCKLCEKACKVGAITVLDD 191 >gi|134297002|ref|YP_001120737.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia vietnamiensis G4] gi|134140159|gb|ABO55902.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia vietnamiensis G4] Length = 88 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPGKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHEESH 69 >gi|298675829|ref|YP_003727579.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288817|gb|ADI74783.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalobium evestigatum Z-7303] Length = 541 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECID--CGVCEPECPVDAIKPD 58 +T+ CI C C E CP D + + L + C+ C C CPV+AIK + Sbjct: 477 ITDGCIFC--HKCEEECPEDAITILDTDEGLIANYNAQRCLGTSCRRCVGICPVNAIKYE 534 Query: 59 T 59 Sbjct: 535 D 535 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Query: 38 DECIDCGVCEPECPVDAIK-PDTEPGL 63 D CI C CE ECP DAI DT+ GL Sbjct: 479 DGCIFCHKCEEECPEDAITILDTDEGL 505 >gi|284165039|ref|YP_003403318.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] gi|284014694|gb|ADB60645.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] Length = 552 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 2/76 (2%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C C +VCP + ++ L + D CI C C+ CP + Sbjct: 215 PCQHCTDAPCEKVCPTTARHTRDKDGLVLTDYDVCIGCRYCQVACPYGVNYFQWDEPDVA 274 Query: 66 WLKINSEYATQWPNIT 81 +I+ E IT Sbjct: 275 HEEISGENGEDPKEIT 290 >gi|257792191|ref|YP_003182797.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476088|gb|ACV56408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 203 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++V C+ C++ CVE CP + + + + + ++CI C C CP A Sbjct: 51 HIVPMLCMHCENPPCVEACPTEGATYKREDGIVVVDKEKCIGCKSCIMACPYGARYYREN 110 Query: 61 PGLELWLKIN 70 ++N Sbjct: 111 EDGYFGTELN 120 >gi|88859826|ref|ZP_01134465.1| electron transport complex protein RnfB [Pseudoalteromonas tunicata D2] gi|88817820|gb|EAR27636.1| electron transport complex protein RnfB [Pseudoalteromonas tunicata D2] Length = 184 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--KPD 58 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I P Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGATRQMHTVLIDECTGCDLCVEPCPVDCIDMLPV 164 Query: 59 TEPGLELWLKINS 71 E ++N+ Sbjct: 165 QETSQNWKWQLNA 177 >gi|193067862|ref|ZP_03048828.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E110019] gi|192958837|gb|EDV89274.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli E110019] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|325262532|ref|ZP_08129269.1| protein HymB [Clostridium sp. D5] gi|324032364|gb|EGB93642.1| protein HymB [Clostridium sp. D5] Length = 597 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CP D + I+P++C+ CG C +C AI + Sbjct: 546 ADKCKGC--TLCARTCPSDAIIGSVKEPHMINPEKCVKCGACMEKCRFGAIYKE 597 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I D+C C +C CP DAI Sbjct: 541 QYKIDADKCKGCTLCARTCPSDAI 564 >gi|262280139|ref|ZP_06057924.1| NADH-quinone oxidoreductase subunit I [Acinetobacter calcoaceticus RUH2202] gi|262260490|gb|EEY79223.1| NADH-quinone oxidoreductase subunit I [Acinetobacter calcoaceticus RUH2202] Length = 180 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 MTPDFELGEYV 126 >gi|257063467|ref|YP_003143139.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256791120|gb|ACV21790.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 192 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDT 59 M Y + C C++ CV CP + E+ + CI CG C CP D Sbjct: 49 MPYHFSAGCNHCENPACVANCPTGACQKAEDGTVFRDEEVCIGCGSCANSCPYGHPMIDD 108 Query: 60 EP 61 E Sbjct: 109 EA 110 >gi|257065425|ref|YP_003145097.1| indolepyruvate ferredoxin oxidreductase, alpha/beta subunit [Slackia heliotrinireducens DSM 20476] gi|256793078|gb|ACV23748.1| indolepyruvate ferredoxin oxidreductase, alpha/beta subunit [Slackia heliotrinireducens DSM 20476] Length = 637 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +T+ CI CK CP + C CG+C CP DAI + Sbjct: 585 ITDACIGCKRCITQIGCP--AIGFDGEKAVVDRSLCNGCGLCMQVCPFDAIVKE 636 >gi|123455670|ref|XP_001315577.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121898258|gb|EAY03354.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 499 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAI 55 CI C CV+VCP +G + + C+ CG C CP AI Sbjct: 133 ACIDC--YKCVDVCPTGALTKGNHLQTFGHFGLRDSGCVSCGACVDVCPTKAI 183 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDA 54 ++++ CIDC C CP A Sbjct: 123 TTGSISLNHAACIDCYKCVDVCPTGA 148 >gi|119944508|ref|YP_942188.1| electron transport complex, RnfABCDGE type, B subunit [Psychromonas ingrahamii 37] gi|119863112|gb|ABM02589.1| electron transport complex, RnfABCDGE type, B subunit [Psychromonas ingrahamii 37] Length = 184 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + + DEC C +C CP D I Sbjct: 106 AFIREDECIGC--TKCIQACPVDAILGATRQMHTVITDECTGCELCVEPCPTDCI 158 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ CVE CP DC Sbjct: 135 MHTVITDECTGCEL--CVEPCPTDCI 158 >gi|325969843|ref|YP_004246035.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] gi|323709046|gb|ADY02533.1| heterodisulfide reductase, subunit A [Vulcanisaeta moutnovskia 768-28] Length = 656 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 6/59 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V ++C CV CP Y G ++ C CG C CP A++ Sbjct: 579 AFVDQDSCRGSGL--CVSECPYGAIVIKEYAGSKKAWVNEVLCKGCGACVAVCPSGAVQ 635 >gi|330935903|ref|XP_003305174.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] gi|311317931|gb|EFQ86730.1| hypothetical protein PTT_17940 [Pyrenophora teres f. teres 0-1] Length = 230 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAIV 186 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 187 EGP----------NAEYATETREELLYNKEKLLANGDKWE 216 >gi|303244434|ref|ZP_07330769.1| nitrite and sulphite reductase 4Fe-4S region [Methanothermococcus okinawensis IH1] gi|302485132|gb|EFL48061.1| nitrite and sulphite reductase 4Fe-4S region [Methanothermococcus okinawensis IH1] Length = 626 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 V ENC C C +VC V+ + + + CI CG C CP + Sbjct: 491 VNEENCNGCG--RCADVCKVEAIHMKGKTSYTNYNACIGCGKCIAACPNE 538 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 8/47 (17%) Query: 18 VEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 + CP C G + ++ + C CG C C V+AI Sbjct: 466 ISGCPNKCVRPQIHDIGIVGVKYPIVNEENCNGCGRCADVCKVEAIH 512 >gi|300723256|ref|YP_003712556.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus nematophila ATCC 19061] gi|297629773|emb|CBJ90381.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus nematophila ATCC 19061] Length = 207 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIIGANRAMHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|87311263|ref|ZP_01093385.1| molybdopterin oxidoreductase, iron sulfur subunit [Blastopirellula marina DSM 3645] gi|87286003|gb|EAQ77915.1| molybdopterin oxidoreductase, iron sulfur subunit [Blastopirellula marina DSM 3645] Length = 536 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C C++ CPV + + + +H D+CI C C CP D + Sbjct: 115 VTTACHHCADPGCLKGCPVKAYDKDPVTGIVVHLDDQCIGCKYCTMMCPYDVPQY 169 >gi|53728862|ref|ZP_00348260.1| COG2878: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165975622|ref|YP_001651215.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250915|ref|ZP_07337106.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251990|ref|ZP_07338161.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244978|ref|ZP_07527075.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247152|ref|ZP_07529204.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249376|ref|ZP_07531369.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251696|ref|ZP_07533601.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253931|ref|ZP_07535783.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258385|ref|ZP_07540126.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260624|ref|ZP_07542316.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|165875723|gb|ABY68771.1| putative ferredoxin II, iron sulfur protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649420|gb|EFL79605.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650221|gb|EFL80386.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854143|gb|EFM86351.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856401|gb|EFM88552.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858598|gb|EFM90661.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860893|gb|EFM92901.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863135|gb|EFM95077.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867569|gb|EFM99416.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869701|gb|EFN01486.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 203 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + + PD C C +C CP + I+ Sbjct: 114 DMCIGC--TKCIQACPVDAIIGTNKAMHTVIPDLCTGCELCVAPCPTNCIE 162 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 IH D CI C C CPVDAI Sbjct: 111 IHEDMCIGCTKCIQACPVDAI 131 >gi|323484501|ref|ZP_08089867.1| hypothetical protein HMPREF9474_01618 [Clostridium symbiosum WAL-14163] gi|323692562|ref|ZP_08106795.1| NADH dehydrogenase [Clostridium symbiosum WAL-14673] gi|323402279|gb|EGA94611.1| hypothetical protein HMPREF9474_01618 [Clostridium symbiosum WAL-14163] gi|323503428|gb|EGB19257.1| NADH dehydrogenase [Clostridium symbiosum WAL-14673] Length = 595 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 ++YV+ E C C T C + CP +N I ++CI CG C +C AI Sbjct: 538 LSYVIDREKCRGC--TLCAKNCPAGAIIGTVKNPHIIDNEKCIKCGACMEKCHFGAIY 593 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I ++C C +C CP AI Sbjct: 529 CPAG-VCKALLSYVIDREKCRGCTLCAKNCPAGAI 562 >gi|257093872|ref|YP_003167513.1| hydrogenase 2 protein HybA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046396|gb|ACV35584.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 344 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 +C+ C CV CPV + +A + C+ C C CP Sbjct: 126 SCMHCADPSCVSACPVTAMTKDPKTGIVAYDAEACVGCRYCVVACPFG 173 >gi|188577211|ref|YP_001914140.1| ferredoxin [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521663|gb|ACD59608.1| ferredoxin II [Xanthomonas oryzae pv. oryzae PXO99A] Length = 142 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C+ CPVD G + I P C C +C P CPVD I+ Sbjct: 84 AWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 137 >gi|157148004|ref|YP_001455323.1| hypothetical protein CKO_03811 [Citrobacter koseri ATCC BAA-895] gi|157085209|gb|ABV14887.1| hypothetical protein CKO_03811 [Citrobacter koseri ATCC BAA-895] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|114332300|ref|YP_748522.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosomonas eutropha C91] gi|114309314|gb|ABI60557.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Nitrosomonas eutropha C91] Length = 89 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I+PD C +C C CPV Sbjct: 1 MALIITDECINCDV--CEPECPNQAISQGEEIYEINPDLCTECVGHYDTPQCVEVCPVSC 58 Query: 55 IKPD 58 I D Sbjct: 59 IIVD 62 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 17/29 (58%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I DECI+C VCEPECP AI E Sbjct: 1 MALIITDECINCDVCEPECPNQAISQGEE 29 >gi|239905422|ref|YP_002952161.1| putative NAD-reducing hydrogenase subunit [Desulfovibrio magneticus RS-1] gi|239795286|dbj|BAH74275.1| putative NAD-reducing hydrogenase subunit [Desulfovibrio magneticus RS-1] Length = 629 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 3/57 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + C C CV+ CP E + I CI CG C C A++ Sbjct: 573 MPTINAARCKGC--RLCVKACPAGAITGEKKQPHVIDETLCIKCGACATACKFGAVE 627 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 12/32 (37%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+ C C +C CP AI + + Sbjct: 573 MPTINAARCKGCRLCVKACPAGAITGEKKQPH 604 >gi|239618433|ref|YP_002941755.1| dihydroorotate dehydrogenase family protein [Kosmotoga olearia TBF 19.5.1] gi|239507264|gb|ACR80751.1| dihydroorotate dehydrogenase family protein [Kosmotoga olearia TBF 19.5.1] Length = 361 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C CVEVCP E + + + C CG+C+ +CP AI Sbjct: 313 CVKCGV--CVEVCPYFALSM-EEQVIVDEEACFGCGLCQTKCPTKAI 356 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 14/26 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I +C+ CGVC CP A+ + + Sbjct: 308 IDHSKCVKCGVCVEVCPYFALSMEEQ 333 >gi|170760254|ref|YP_001787599.1| iron-sulfur binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169407243|gb|ACA55654.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum A3 str. Loch Maree] Length = 281 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C C +C D I P C CG C CP +AIK + E E + Sbjct: 65 DVCIKCG--KCKSICKFDAI----ENFKIDPFLCEGCGACTLTCPPNAIKLEDEKNAETF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G I D CI CG C+ C DAI+ Sbjct: 56 GGKKANIDEDVCIKCGKCKSICKFDAIE 83 >gi|162452981|ref|YP_001615348.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sorangium cellulosum 'So ce 56'] gi|161163563|emb|CAN94868.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sorangium cellulosum 'So ce 56'] Length = 300 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C + CV+VCPV ++ + + + + CI C CE CP A + + Sbjct: 149 YYLPVQCQQCDNAPCVKVCPVQATWKEPDGIVAVDYNWCIGCRYCEAACPYHARRFNWTK 208 Query: 62 GLELWLKIN 70 +IN Sbjct: 209 PEVPADEIN 217 >gi|171320168|ref|ZP_02909230.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|172061765|ref|YP_001809417.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia ambifaria MC40-6] gi|171094582|gb|EDT39634.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MEX-5] gi|171994282|gb|ACB65201.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia ambifaria MC40-6] Length = 88 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP G + I P++C +C C+ CPV+ Sbjct: 1 MSLMITDECINCDV--CEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|91227192|ref|ZP_01261651.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio alginolyticus 12G01] gi|91188720|gb|EAS75008.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio alginolyticus 12G01] Length = 228 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 143 >gi|74312004|ref|YP_310423.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|73855481|gb|AAZ88188.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] Length = 239 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|295094257|emb|CBK83348.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Coprococcus sp. ART55/1] Length = 597 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 5 VTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++E CI CK C+ CP + +AI C CG+C CPV AI Sbjct: 543 ISEKCIQCK--KCIREIGCP--AIILKDGKVAIDESLCTGCGLCSQICPVGAI 591 >gi|256422828|ref|YP_003123481.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] gi|256037736|gb|ACU61280.1| NADH-quinone oxidoreductase, chain I [Chitinophaga pinensis DSM 2588] Length = 171 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 12/71 (16%) Query: 6 TENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC F I+ CI CG CE CP AI Sbjct: 48 GERCVGCYL--CAAACPVDCIALQATEDENGRRYPEFFRINFSRCIFCGYCEEACPTYAI 105 Query: 56 KPDTEPGLELW 66 + + + + Sbjct: 106 QLTPDFEMAEY 116 >gi|188585138|ref|YP_001916683.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349825|gb|ACB84095.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 268 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C C +VCPVD N I EC++CG C+ +CP D I D E Sbjct: 214 CIGCGV--CAKVCPVDAITIENNLAYIDSHECVNCGKCKEKCPRDCITSDLE 263 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 C +CP D +N + I P++C C C CP D IK Sbjct: 145 CEHICPFDAIEMQDNGIPHIDPEKCTGCNKCANTCPKDVIK 185 >gi|56478497|ref|YP_160086.1| phenylacetyl-CoA:acceptor oxidoreductase [Aromatoleum aromaticum EbN1] gi|56314540|emb|CAI09185.1| Phenylacetyl-CoA:acceptor oxidoreductase [Aromatoleum aromaticum EbN1] Length = 215 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C+ C C EVCP + + L I D CI C C CP +A Sbjct: 57 SCMHCDEPPCEEVCPTTATKKRADGLVTIDYDTCIGCANCVMACPYEA 104 >gi|146296862|ref|YP_001180633.1| Fe-S cluster domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410438|gb|ABP67442.1| Fe-S cluster domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 444 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I CIDCG C CP A Sbjct: 13 EKCRGC--TNCIKKCPTEAIRVRSSKARIIDQRCIDCGECIRTCPYHA 58 >gi|325843356|ref|ZP_08167939.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] gi|325489385|gb|EGC91758.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] Length = 568 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL-ELW 66 NC C CV CPV I + CI CG+C CP + K +TE + + Sbjct: 10 NCKNC--YACVRACPVQSIKIKNEQAIIMEERCIACGLCLKACPKNVKKIETELEKVKQF 67 Query: 67 LK 68 +K Sbjct: 68 IK 69 >gi|238921139|ref|YP_002934654.1| 4Fe-4S iron-sulfur binding domain protein [Edwardsiella ictaluri 93-146] gi|238870708|gb|ACR70419.1| 4Fe-4S iron-sulfur binding domain protein [Edwardsiella ictaluri 93-146] Length = 180 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C VCP ++F+ + ++CI C C CP Sbjct: 58 CRQCEDAPCANVCPNGAISRQQDFICVDQEKCIGCKTCVVACPYG 102 >gi|288574319|ref|ZP_06392676.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570060|gb|EFC91617.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 62 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C+ CV CPV+ + + +C++CG C CPV+AI Sbjct: 14 ETCVGCE--SCVGTCPVEAIEMNDGKAVVDEGKCVECGACVSACPVEAI 60 >gi|227111751|ref|ZP_03825407.1| nitrite reductase complex component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 223 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C H CV+VCP + + + + ++PD C+ C C CP I P T+ Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDAASGIVDVNPDLCVGCQYCLAACPYQVRFIHPQTKTAD 150 Query: 64 E 64 + Sbjct: 151 K 151 >gi|222053362|ref|YP_002535724.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] gi|221562651|gb|ACM18623.1| Electron transfer flavoprotein alpha subunit [Geobacter sp. FRC-32] Length = 449 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK---- 56 VV CI C C CPV+ + A+ ++CI C C CP A++ Sbjct: 15 ARVVEGKCIACGAR-CESSCPVNSIEMSDGGEPAVLAEKCIGCEKCIKVCPASALEMFYS 73 Query: 57 PDTEPGLELW 66 P+ L+ W Sbjct: 74 PEDLELLKQW 83 >gi|91228909|ref|ZP_01262809.1| electron transport complex protein RnfB [Vibrio alginolyticus 12G01] gi|269968667|ref|ZP_06182663.1| electron transport complex protein RnfB [Vibrio alginolyticus 40B] gi|91187540|gb|EAS73872.1| electron transport complex protein RnfB [Vibrio alginolyticus 12G01] gi|269826721|gb|EEZ81059.1| electron transport complex protein RnfB [Vibrio alginolyticus 40B] Length = 198 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|239927159|ref|ZP_04684112.1| Fe-S-cluster-containing hydrogenase, HybA [Streptomyces ghanaensis ATCC 14672] Length = 235 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDTEPG 62 ++ C C H C++VCP + E + + D C CG C P CP I +PD Sbjct: 145 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYGVIDQRPDDGRA 204 Query: 63 LE 64 + Sbjct: 205 WK 206 >gi|225175951|ref|ZP_03729943.1| NADH dehydrogenase (quinone) [Dethiobacter alkaliphilus AHT 1] gi|225168539|gb|EEG77341.1| NADH dehydrogenase (quinone) [Dethiobacter alkaliphilus AHT 1] Length = 608 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +V E+C C C + CPVD G+ I C+ CG+C C D I ++PG Sbjct: 537 IVAEDCKGCGL--CRKQCPVDAISGGKKEPHVIDQATCLRCGLCVNSCKFDCITVSSKPG 594 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Query: 19 EVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +VCP +C E I ++C CG+C +CPVDAI Sbjct: 522 KVCPAKNCKALIE--YEIVAEDCKGCGLCRKQCPVDAI 557 >gi|224418131|ref|ZP_03656137.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|253827458|ref|ZP_04870343.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313141666|ref|ZP_07803859.1| 4Fe-4S ferredoxin [Helicobacter canadensis MIT 98-5491] gi|253510864|gb|EES89523.1| ferredoxin [Helicobacter canadensis MIT 98-5491] gi|313130697|gb|EFR48314.1| 4Fe-4S ferredoxin [Helicobacter canadensis MIT 98-5491] Length = 83 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C C E CP + EG+ + I P+ C +C C CPVDA Sbjct: 1 MSLMINEECIACD--ACREECPNEAIDEGDPYYIIDPELCTECYGFYDEPACLSVCPVDA 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IVSDPD 64 >gi|239617509|ref|YP_002940831.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506340|gb|ACR79827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] Length = 95 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M +V +CI C CV+ CPV+ + I C CG C CP +AI P++ Sbjct: 1 MPWVKENDCIGCGL--CVQACPVENAIKMKDRKAVIDNSVCTRCGKCFDVCPKNAIHPNS 58 Query: 60 E 60 E Sbjct: 59 E 59 >gi|168700929|ref|ZP_02733206.1| formate dehydrogenase beta subunit [Gemmata obscuriglobus UQM 2246] Length = 319 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 ++ C C C + CP E + I PD C C C CP I Sbjct: 141 SDVCKHCAAAPCQQACPTGSIVYTEFANVYIQPDICNGCAYCVAACPFGVI 191 >gi|270307556|ref|YP_003329614.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Dehalococcoides sp. VS] gi|270153448|gb|ACZ61286.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Dehalococcoides sp. VS] Length = 312 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + C +VCPV F + + + I CI C C CP A Sbjct: 146 PCMHCDNPPCTKVCPVGATFKQPDGIVVIDYQRCIGCRFCIVACPYTA 193 >gi|15920962|ref|NP_376631.1| indolepyruvate oxidoreductase subunit A [Sulfolobus tokodaii str. 7] gi|15621746|dbj|BAB65740.1| 598aa long hypothetical indolepyruvate oxidoreductase subunit A [Sulfolobus tokodaii str. 7] Length = 598 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 9 CILCKHTDCVE--VCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI--KPDTEPGL 63 C C T C + CP E+ I P CI CG C P CP +AI K + G Sbjct: 537 CTGC--TICYDYFTCP--AIIPREDKKAIIDPVLCIGCGACIPICPYNAISLKGEIPKGW 592 Query: 64 EL 65 + Sbjct: 593 DE 594 >gi|326796151|ref|YP_004313971.1| electron transport complex protein rnfB [Marinomonas mediterranea MMB-1] gi|326546915|gb|ADZ92135.1| Electron transport complex protein rnfB [Marinomonas mediterranea MMB-1] Length = 198 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 113 DECIGC--TKCIQACPVDAILGAAKQMHTVIADECTGCDLCVEPCPVDCI 160 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D E + I DECI C C CPVDAI Sbjct: 90 VEALPLDGDVEESPAKRVAVIREDECIGCTKCIQACPVDAI 130 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 137 MHTVIADECTGCDL--CVEPCPVDCI 160 >gi|317008927|gb|ADU79507.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori India7] Length = 84 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYHIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD 58 AI PD Sbjct: 59 AILPD 63 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|269961739|ref|ZP_06176099.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833522|gb|EEZ87621.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 255 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + CV VCPV ++ E+ + + C+ C C CP DA Sbjct: 109 CNHCDNPPCVAVCPVQATFQREDGIVMVDNSRCVACAYCVQACPYDA 155 >gi|116748324|ref|YP_845011.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697388|gb|ABK16576.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 381 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 15/82 (18%) Query: 5 VTENCILCKHTDCVEVC----------PVDCFYEGEN---FLAIHPDECIDCGVCEPECP 51 + +NCI C C + C P D I P C+ C C CP Sbjct: 191 ILKNCIGCGV--CRDQCAHEAIELVDRPEDAPRPEPKITQMARIDPRRCVGCAACIHACP 248 Query: 52 VDAIKPDTEPGLELWLKINSEY 73 A++ D + L +++ EY Sbjct: 249 QHALEVDWKTDLPRFMERMVEY 270 >gi|313203348|ref|YP_004042005.1| fad-dependent pyridine nucleotide-disulfide oxidoreductase [Paludibacter propionicigenes WB4] gi|312442664|gb|ADQ79020.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Paludibacter propionicigenes WB4] Length = 443 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V+ +N CI K CV+ CP N I+ CI G C CPV+AI Sbjct: 56 VIDQNRCI--KSGACVDACPEHDILGIVNGKATVINASHCIGHGACFRACPVEAI 108 >gi|260892256|ref|YP_003238353.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] gi|260864397|gb|ACX51503.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Ammonifex degensii KC4] Length = 995 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C CV VCP +AI P C CG C ECP AI+ + Sbjct: 927 CVACL--TCVRVCPYGAPRYTPEKGVVAIEPLACQGCGTCVGECPNAAIELE 976 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 26/77 (33%), Gaps = 20/77 (25%) Query: 7 ENCILCKHTDCVEVCPVDC---FYEG---------------ENFLAIHPDECIDCGVCEP 48 E C C C +VCPV+ F +G I C CG C Sbjct: 105 EECRACGV--CFKVCPVEVPDEFNQGLSSRKAIYQPYPQAFPRAAVIDWGSCTRCGRCRD 162 Query: 49 ECPVDAIKPDTEPGLEL 65 CP AI + EP + Sbjct: 163 TCPTKAIDLEMEPEEKE 179 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + P +C+ C C CP A + E G Sbjct: 922 VDPAKCVACLTCVRVCPYGAPRYTPEKG 949 >gi|161524127|ref|YP_001579139.1| ferredoxin [Burkholderia multivorans ATCC 17616] gi|189351116|ref|YP_001946744.1| ferredoxin [Burkholderia multivorans ATCC 17616] gi|160341556|gb|ABX14642.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia multivorans ATCC 17616] gi|189335138|dbj|BAG44208.1| electron transport complex protein [Burkholderia multivorans ATCC 17616] Length = 320 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 112 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCIAMVPV 169 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 170 TGERTGWDAWTQEQADAARE 189 >gi|125972862|ref|YP_001036772.1| NADH dehydrogenase (quinone) [Clostridium thermocellum ATCC 27405] gi|256005732|ref|ZP_05430687.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 2360] gi|281417061|ref|ZP_06248081.1| NADH dehydrogenase (quinone) [Clostridium thermocellum JW20] gi|125713087|gb|ABN51579.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Clostridium thermocellum ATCC 27405] gi|255990305|gb|EEU00432.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 2360] gi|281408463|gb|EFB38721.1| NADH dehydrogenase (quinone) [Clostridium thermocellum JW20] gi|316940900|gb|ADU74934.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 1313] Length = 597 Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M Y + E C C C CPV GE I ++CI CGVC +CP AI Sbjct: 539 MHYEIDAEKCKSCG--ICARQCPVKAIS-GEKKVPYVIDQNKCIKCGVCMEKCPFKAI 593 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I ++C CG+C +CPV AI + + Sbjct: 540 HYEIDAEKCKSCGICARQCPVKAISGEKKVP 570 >gi|328474564|gb|EGF45369.1| electron transport complex protein RnfB [Vibrio parahaemolyticus 10329] Length = 198 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 +T W ++N+ Sbjct: 165 ETTTDSWKW-QLNA 177 >gi|256810301|ref|YP_003127670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793501|gb|ACV24170.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 405 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 YV+ E+ CI C C +VC V+ + I P+ C+ CG CE ECPV AI+ Sbjct: 272 YVIDEDLCIGC--RICQKVCHVNAVKISKEIKLPYIVPELCVACGACERECPVGAIRAVK 329 Query: 60 EPGLEL 65 + Sbjct: 330 PEEAKE 335 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLEL 65 E C+ C +C CPV+ E I CI C C CP++ AI E L+ Sbjct: 126 EVCVRCG--NCERACPVNVIKRKEGRYVIDRASCISCKECIKACPIENAIVVFDERTLKE 183 Query: 66 WLK 68 ++ Sbjct: 184 KIE 186 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%) Query: 8 NCILCKHTDCVEVCPVDCFY------EGENF---------LAIHPDECIDCGVCEPECPV 52 +CI C +CVE CP E E L I + C+ CG CE CPV Sbjct: 83 SCIAC--ANCVEACPTGVLEIDKHRAETEGLFFDIPKYTNLIIDEEVCVRCGNCERACPV 140 Query: 53 DAIK 56 + IK Sbjct: 141 NVIK 144 Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 8/58 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA------IHPDECIDCGVCEPECPVDAIKPD 58 E CI C+ C E CP N I CI C C CP ++ D Sbjct: 47 ERCISCE--ACKESCPAFAIELIYNESYNKKLPKIDEGSCIACANCVEACPTGVLEID 102 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++V CI C C +VC + E + EC+ CG+C CP AI+ Sbjct: 211 PHIVDSLCITCG--TCKDVC-IGEIDLKEKKVV----ECVKCGLCIEVCPTTAIRTHVP 262 >gi|207859432|ref|YP_002246083.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206711235|emb|CAR35611.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|168243690|ref|ZP_02668622.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450668|ref|YP_002048269.1| cytochrome c nitrite reductase Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200387438|ref|ZP_03214050.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194408972|gb|ACF69191.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199604536|gb|EDZ03081.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205337307|gb|EDZ24071.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|198241756|ref|YP_002218172.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936272|gb|ACH73605.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326625971|gb|EGE32316.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|169861584|ref|XP_001837426.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Coprinopsis cinerea okayama7#130] gi|116501447|gb|EAU84342.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Coprinopsis cinerea okayama7#130] Length = 245 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C CPVDAI Sbjct: 144 ERCIACKL--CEAICPAQAITIESEARQDGSRKTTKYDIDMTKCIYCGFCAEACPVDAI 200 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 144 ERCIACKLCEAICPAQAITIESEARQD 170 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD E +N Sbjct: 185 CIYCGF--CAEACPVDAIVETQNQ 206 >gi|21226713|ref|NP_632635.1| Iron-sulfur cluster-binding protein [Methanosarcina mazei Go1] gi|20905001|gb|AAM30307.1| Iron-sulfur cluster-binding protein [Methanosarcina mazei Go1] Length = 376 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ T C LCK CV C E L I+P++CI C C CP DA++ Sbjct: 309 PFINTSKCALCK--ACVLNCSAHAIEEMNKTLKINPEKCIQCYCCRELCPNDAVE 361 >gi|308184080|ref|YP_003928213.1| ferrodoxin [Helicobacter pylori SJM180] gi|308060000|gb|ADO01896.1| ferrodoxin [Helicobacter pylori SJM180] Length = 83 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ +I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYSIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|284162362|ref|YP_003400985.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284012359|gb|ADB58312.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 420 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 23/87 (26%) Query: 4 VVTENCILCKHTDCVEVCPVD-------------CFYEGENF-----LAIHPDECIDCGV 45 V ENC C +C +VCPV+ Y + I PD C CG Sbjct: 111 FVNENCTACG--ECEKVCPVERPNDFDFGMDKTKAIYLPHDMAFPPIYVIDPDVCNKCGE 168 Query: 46 CEPECPVDAIKPDTEPGLELWLKINSE 72 C C DAI D +P L IN++ Sbjct: 169 CVKVCKYDAINLDEQPQE---LTINAK 192 >gi|269791990|ref|YP_003316894.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099625|gb|ACZ18612.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 57 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C+ C+ CV VCP + ++PD C++CG C CPV AI Sbjct: 4 AVVDKDTCVGCE--ACVGVCPTSAISMVDGKAEVNPDACVECGACVATCPVSAI 55 >gi|157157694|ref|YP_001462964.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] gi|238900886|ref|YP_002926682.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli BW2952] gi|256022666|ref|ZP_05436531.1| hypothetical protein E4_04784 [Escherichia sp. 4_1_40B] gi|260843976|ref|YP_003221754.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli O103:H2 str. 12009] gi|260855495|ref|YP_003229386.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli O26:H11 str. 11368] gi|297516334|ref|ZP_06934720.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli OP50] gi|300821457|ref|ZP_07101604.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 119-7] gi|300930861|ref|ZP_07146230.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 187-1] gi|300951260|ref|ZP_07165111.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 116-1] gi|300958548|ref|ZP_07170680.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 175-1] gi|301647851|ref|ZP_07247635.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 146-1] gi|307138328|ref|ZP_07497684.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli H736] gi|331677541|ref|ZP_08378216.1| putative oxidoreductase Fe-S subunit [Escherichia coli H591] gi|1549282|gb|AAB47947.1| hypothetical protein [Escherichia coli str. K-12 substr. MG1655] gi|157079724|gb|ABV19432.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] gi|238862104|gb|ACR64102.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli BW2952] gi|242377399|emb|CAQ32147.2| predicted 4Fe-4S ferredoxin-type protein [Escherichia coli BL21(DE3)] gi|257754144|dbj|BAI25646.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O26:H11 str. 11368] gi|257759123|dbj|BAI30620.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O103:H2 str. 12009] gi|300314793|gb|EFJ64577.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 175-1] gi|300449475|gb|EFK13095.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 116-1] gi|300461277|gb|EFK24770.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 187-1] gi|300525960|gb|EFK47029.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 119-7] gi|301074041|gb|EFK88847.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 146-1] gi|331074001|gb|EGI45321.1| putative oxidoreductase Fe-S subunit [Escherichia coli H591] Length = 239 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|307718918|ref|YP_003874450.1| hypothetical protein STHERM_c12360 [Spirochaeta thermophila DSM 6192] gi|306532643|gb|ADN02177.1| hypothetical protein STHERM_c12360 [Spirochaeta thermophila DSM 6192] Length = 574 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y VT +C C C+ CPV + + C+ CG C CP A Sbjct: 8 YTVTSDCFDC--YKCIRECPVKAIRISGGRAEVVEELCLYCGHCVEVCPSGA 57 >gi|304391506|ref|ZP_07373448.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ahrensia sp. R2A130] gi|303295735|gb|EFL90093.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ahrensia sp. R2A130] Length = 273 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + + D+CI CG+C C A + D G Sbjct: 98 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVDEDKCIGCGLCAWSCAYGAREMDAAAG 154 >gi|258516625|ref|YP_003192847.1| NADH dehydrogenase (quinone) [Desulfotomaculum acetoxidans DSM 771] gi|257780330|gb|ACV64224.1| NADH dehydrogenase (quinone) [Desulfotomaculum acetoxidans DSM 771] Length = 619 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 +T+V+ E C C C CP GE + I +CI CG C C DAI Sbjct: 562 LTFVIDKEKCNGCG--KCARSCPAGAIT-GEKKMPHEIDITKCIKCGACLAGCKFDAIY 617 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CP E F I ++C CG C CP AI + + E+ + Sbjct: 553 CPAGACTELLTF-VIDKEKCNGCGKCARSCPAGAITGEKKMPHEIDI 598 >gi|224583440|ref|YP_002637238.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467967|gb|ACN45797.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 192 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|218560650|ref|YP_002393563.1| hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli S88] gi|218367419|emb|CAR05201.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli S88] gi|294493205|gb|ADE91961.1| 4Fe-4S binding domain protein [Escherichia coli IHE3034] gi|307628655|gb|ADN72959.1| putative electron transport protein YsaA [Escherichia coli UM146] gi|315285329|gb|EFU44774.1| 4Fe-4S binding domain protein [Escherichia coli MS 110-3] gi|323949817|gb|EGB45701.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323954882|gb|EGB50662.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] Length = 157 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|126700932|ref|YP_001089829.1| electron transport protein [Clostridium difficile 630] gi|115252369|emb|CAJ70210.1| putative oxidoreductase, Fe-S subunit [Clostridium difficile] Length = 171 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C + CP N + I+ + CI C C CP+ AI Sbjct: 59 CRHCEDAPCAKACPNGGIVRVGNTIKINEENCIGCKTCMLACPIGAI 105 >gi|114320439|ref|YP_742122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226833|gb|ABI56632.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 566 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC C +VCP + L D C+ CG+C+ CP +A+ Sbjct: 425 VNTDACTLC--MACAQVCPSSALTDNPESVQLRFIEDNCVQCGLCQTACPEEAV 476 Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 5/54 (9%) Query: 6 TENCIL-----CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T+ C T C++ C + + ++P C GVC CP A Sbjct: 183 TDICAHGASGLTGCTRCLDGCTTGAITSLGDMIEVNPYLCQGVGVCVSACPSGA 236 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 P F E + ++ D C C C CP A+ + E +++ N Sbjct: 416 PGAPFGE----VLVNTDACTLCMACAQVCPSSALTDNPESVQLRFIEDN 460 >gi|110643822|ref|YP_671552.1| putative electron transport protein YsaA [Escherichia coli 536] gi|218691862|ref|YP_002400074.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli ED1a] gi|110345414|gb|ABG71651.1| putative electron transport protein YsaA [Escherichia coli 536] gi|218429426|emb|CAR10392.2| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli ED1a] gi|222035288|emb|CAP78033.1| electron transport protein ysaA [Escherichia coli LF82] gi|312948139|gb|ADR28966.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O83:H1 str. NRG 857C] gi|324007369|gb|EGB76588.1| 4Fe-4S binding domain protein [Escherichia coli MS 57-2] Length = 157 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|124266052|ref|YP_001020056.1| iron-sulfur cluster protein [Methylibium petroleiphilum PM1] gi|124258827|gb|ABM93821.1| iron-sulfur cluster protein [Methylibium petroleiphilum PM1] Length = 262 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D E Sbjct: 111 SCLHCEDPPCVPVCPTGASYKRKEDGIVLVDYDKCIGCKYCSWACPYGARELDEE 165 >gi|331648631|ref|ZP_08349719.1| putative oxidoreductase, Fe-S subunit [Escherichia coli M605] gi|331042378|gb|EGI14520.1| putative oxidoreductase, Fe-S subunit [Escherichia coli M605] Length = 644 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV + + ++ +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVYALTFQADSVQLNEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|330835151|ref|YP_004409879.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (SreB-like ferredoxin) [Metallosphaera cuprina Ar-4] gi|329567290|gb|AEB95395.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (SreB-like ferredoxin) [Metallosphaera cuprina Ar-4] Length = 274 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + CVEVCPV F ++ + + +ECI C CP Sbjct: 90 YNIPINCFHCMNAPCVEVCPVGATFKRTQDGIVLVDYEECIGTKYCIYACPYG 142 >gi|312135108|ref|YP_004002446.1| Fe-S cluster domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775159|gb|ADQ04646.1| Fe-S cluster domain protein [Caldicellulosiruptor owensensis OL] Length = 443 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 DKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + D+C C C CP +AI+ Sbjct: 9 LDKDKCKGCTNCIKRCPTEAIR 30 >gi|302391251|ref|YP_003827071.1| dihydroorotate dehydrogenase family protein [Acetohalobium arabaticum DSM 5501] gi|302203328|gb|ADL12006.1| dihydroorotate dehydrogenase family protein [Acetohalobium arabaticum DSM 5501] Length = 409 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ E CI C C+ C D +GE + PD+C CG+C CP +A+ + Sbjct: 339 VIPEECIGCG--MCLNWCFYDAISLYEEDGETKAKVDPDKCDHCGLCVSLCPKEALNMEY 396 Query: 60 EPGLEL 65 E E Sbjct: 397 EDKDEK 402 >gi|257486634|ref|ZP_05640675.1| iron-sulfur cluster-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVAPCPVDCIE 137 >gi|238912647|ref|ZP_04656484.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 287 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDN 213 >gi|218548099|ref|YP_002381890.1| oxidoreductase Fe-S binding subunit [Escherichia fergusonii ATCC 35469] gi|218355640|emb|CAQ88252.1| fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit [Escherichia fergusonii ATCC 35469] Length = 702 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 99 CHHCEDAPCARSCPNGAISHVNDSVQVNQQKCIGCKSCVIACPFG 143 >gi|168236981|ref|ZP_02662039.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734388|ref|YP_002117213.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709890|gb|ACF89111.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290036|gb|EDY29395.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|150003986|ref|YP_001298730.1| pyruvate-formate lyase-activating enzyme [Bacteroides vulgatus ATCC 8482] gi|149932410|gb|ABR39108.1| pyruvate-formate lyase-activating enzyme [Bacteroides vulgatus ATCC 8482] Length = 302 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C++VCP + +C+ CG C ECP AI+ Sbjct: 53 CLGCG--TCLKVCPNGALTLTPEGIITDKQKCVLCGRCAEECPAMAIE 98 Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 9/42 (21%) Query: 21 CPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C G++ L +C+ CG C CP A Sbjct: 27 CPLSCIWCHNPEGIRNGKDKLY-TAKKCLGCGTCLKVCPNGA 67 >gi|126664781|ref|ZP_01735765.1| formate dehydrogenase, iron-sulfur subunit, putative [Marinobacter sp. ELB17] gi|126631107|gb|EBA01721.1| formate dehydrogenase, iron-sulfur subunit, putative [Marinobacter sp. ELB17] Length = 134 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 18 VEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 + VCP DCFY+ E+ + +H D CI CG C CP A + Sbjct: 1 MAVCPTDCFYQTEDGIVLHSKDLCIGCGYCFYACPFGAPQF 41 >gi|91772648|ref|YP_565340.1| nitrite and sulphite reductase [Methanococcoides burtonii DSM 6242] gi|91711663|gb|ABE51590.1| coenzyme F420-dependent sulfite reductase [Methanococcoides burtonii DSM 6242] Length = 639 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V TE C C C E+C ++ I D CI+CG C CP +A + + G Sbjct: 514 VDTEKCTGCG--RCSELCKLNAISVISGKAVIDRDLCINCGWCVRGCPHEAAV-EDQKGY 570 Query: 64 ELWLKIN 70 +W+ N Sbjct: 571 SVWIGGN 577 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 11/29 (37%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C CG C CP + I+ D Sbjct: 13 VVDTGMCTLCGACAAVCPYEIIEFDENGP 41 >gi|16767529|ref|NP_463144.1| formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991482|ref|ZP_02572581.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168466975|ref|ZP_02700823.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821264|ref|ZP_02833264.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197263392|ref|ZP_03163466.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422839|gb|AAL23103.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|195630636|gb|EDX49248.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197241647|gb|EDY24267.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330187|gb|EDZ16951.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205342069|gb|EDZ28833.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261249378|emb|CBG27241.1| cytochrome C-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996599|gb|ACY91484.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160771|emb|CBW20302.1| 4Fe-4S subunit, subunit of nitrite reductase complex [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915383|dbj|BAJ39357.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088687|emb|CBY98445.1| Uncharacterized ferredoxin-like protein ydhX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223150|gb|EFX48220.1| NrfC protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132620|gb|ADX20050.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991095|gb|AEF10078.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|15668692|ref|NP_247491.1| polyferredoxin MvhB [Methanocaldococcus jannaschii DSM 2661] gi|48474782|sp|P81292|Y51A_METJA RecName: Full=Uncharacterized polyferredoxin-like protein MJ0514.1 gi|2826292|gb|AAB98510.1| polyferredoxin (mvhB) [Methanocaldococcus jannaschii DSM 2661] Length = 163 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 + CI C C+E+CPV+ + L I + ++C+ CG C+ CP +AI Sbjct: 37 DKCISCG--KCIEICPVNAITYSSDGLYITINKEKCVFCGKCKKVCPTNAI 85 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++E C C C+ CP + E + + I ++C CG CE CP++AI Sbjct: 112 ISERCASCLV--CLRNCPFNAIEEYGSKIRIDINKCELCGKCEEICPLNAI 160 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 D+CI CG C CPV+AI ++ L++ IN E Sbjct: 37 DKCISCGKCIEICPVNAITYSSDG---LYITINKE 68 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 22/81 (27%) Query: 7 ENCILCKHTDCVEVCPVDCF---------YEGENFLAIHPDECID--------CGVCEPE 49 E C+ C C +VCP + E + + E ID C VC Sbjct: 68 EKCVFCG--KCKKVCPTNAIVIIRLRCEINEDARIIEVDKYEFIDYISERCASCLVCLRN 125 Query: 50 CPVDAIKPDTEPGLELWLKIN 70 CP +AI+ E G ++ + IN Sbjct: 126 CPFNAIE---EYGSKIRIDIN 143 >gi|194289253|ref|YP_002005160.1| ferredoxin [Cupriavidus taiwanensis LMG 19424] gi|193223088|emb|CAQ69093.1| FERREDOXIN [4FE-4S] PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 273 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + PD C C +C P CPVD I Sbjct: 88 CIGC--TLCIQACPVDAIAGAAKQMHTVIPDLCTGCDLCVPPCPVDCI 133 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 IDESLCIGCTLCIQACPVDAI 103 >gi|319428519|gb|ADV56593.1| surface localized dimethyl sulfoxide reductase, ferredoxin subunit, DmsB [Shewanella putrefaciens 200] Length = 225 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + C C CV+ CP + ++ L I CI C C CP DA + D Sbjct: 78 AYYASVGCNHCSEPVCVKACPTGAMHKRAKDGLVLIEESLCIGCESCSRACPYDAPQIDI 137 Query: 60 E 60 E Sbjct: 138 E 138 >gi|56416077|ref|YP_153152.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617418|ref|YP_001591383.1| hypothetical protein SPAB_05274 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168231287|ref|ZP_02656345.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470140|ref|ZP_03076124.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197365004|ref|YP_002144641.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238912736|ref|ZP_04656573.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|56130334|gb|AAV79840.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366782|gb|ABX70550.1| hypothetical protein SPAB_05274 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194456504|gb|EDX45343.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197096481|emb|CAR62088.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205334315|gb|EDZ21079.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|89896192|ref|YP_519679.1| hypothetical protein DSY3446 [Desulfitobacterium hafniense Y51] gi|219668017|ref|YP_002458452.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335640|dbj|BAE85235.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538277|gb|ACL20016.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 239 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC--EPECPVDAIKPDTE 60 E C+ C +C+ CP+ G + I+ DEC++CG+C + ECPV+A E Sbjct: 6 ELCLSCG--ECLPYCPMGAIEMG-DTAQINQDECVECGICIRQIECPVEAFYEPAE 58 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I+ + C+ CG C P CP+ AI+ Sbjct: 3 INEELCLSCGECLPYCPMGAIEMGD 27 >gi|295107537|emb|CBL05080.1| formate dehydrogenase beta subunit [Gordonibacter pamelaeae 7-10-1-b] Length = 307 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +C C C +CP +E + + +CI C C CP D + Sbjct: 78 SCQHCTDAACATICPAGAITKHEATGLVTVDDSKCIGCQYCSTACPFDVPRY 129 >gi|253989007|ref|YP_003040363.1| NADH dehydrogenase subunit I [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780457|emb|CAQ83619.1| NADH-quinone oxidoreductase subunit I [Photorhabdus asymbiotica] Length = 180 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|239995948|ref|ZP_04716472.1| electron transport complex protein RnfB [Alteromonas macleodii ATCC 27126] Length = 193 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 111 AFIREDECIGC--TKCIQACPVDAILGAAKHMHTVITDECTGCDLCVDPCPVDCI 163 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 VE P+D + E+ I DECI C C CPVDAI Sbjct: 93 VEPKPLDAAHGEEDVKKVAFIREDECIGCTKCIQACPVDAI 133 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C CV+ CPVDC Sbjct: 140 MHTVITDECTGCDL--CVDPCPVDCI 163 >gi|197251255|ref|YP_002149193.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214958|gb|ACH52355.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|191173211|ref|ZP_03034742.1| protein aegA [Escherichia coli F11] gi|300995683|ref|ZP_07181211.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 200-1] gi|190906462|gb|EDV66070.1| protein aegA [Escherichia coli F11] gi|300304791|gb|EFJ59311.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 200-1] gi|323188716|gb|EFZ74001.1| hypothetical protein ECRN5871_3136 [Escherichia coli RN587/1] gi|324011765|gb|EGB80984.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 60-1] Length = 644 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 21/57 (36%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVYALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|317484216|ref|ZP_07943145.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924565|gb|EFV45722.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 240 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C CV+ CP Y+ E+ + + CI CG C CP A Sbjct: 56 ACMHCDEPSCVDACPTHATYKAEDGVVMVDETRCIACGSCMRACPYQA 103 >gi|299771412|ref|YP_003733438.1| NADH dehydrogenase subunit I [Acinetobacter sp. DR1] gi|298701500|gb|ADI92065.1| NADH dehydrogenase subunit I [Acinetobacter sp. DR1] Length = 180 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 LTPDFELGEYV 126 >gi|226953545|ref|ZP_03824009.1| NADH dehydrogenase subunit I [Acinetobacter sp. ATCC 27244] gi|294649467|ref|ZP_06726891.1| NADH-quinone oxidoreductase subunit I [Acinetobacter haemolyticus ATCC 19194] gi|226835723|gb|EEH68106.1| NADH dehydrogenase subunit I [Acinetobacter sp. ATCC 27244] gi|292824637|gb|EFF83416.1| NADH-quinone oxidoreductase subunit I [Acinetobacter haemolyticus ATCC 19194] Length = 180 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 MTPDFELAEYV 126 >gi|239627945|ref|ZP_04670976.1| NADH dehydrogenase [Clostridiales bacterium 1_7_47_FAA] gi|239518091|gb|EEQ57957.1| NADH dehydrogenase [Clostridiales bacterium 1_7_47FAA] Length = 596 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 ++YV+ + C C T C CP +N I ++CI CG C +C AI Sbjct: 539 LSYVIDRDKCRGC--TLCARTCPAGAIVGSVKNPHVIDLNKCIKCGACMEKCKFGAIY 594 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP + I D+C C +C CP AI Sbjct: 530 CPAG-VCKALLSYVIDRDKCRGCTLCARTCPAGAI 563 >gi|254427723|ref|ZP_05041430.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Alcanivorax sp. DG881] gi|196193892|gb|EDX88851.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Alcanivorax sp. DG881] Length = 194 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I + Sbjct: 109 AYIREDECIGC--TKCIQACPVDAIVGAAKLMHTVIVDECTGCDLCVEPCPVDCIDMLEV 166 Query: 60 EPGLELW 66 + L+ W Sbjct: 167 KQTLQTW 173 >gi|204926813|ref|ZP_03218015.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323478|gb|EDZ08673.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|304314560|ref|YP_003849707.1| energy-converting hydrogenase A, subunit P [Methanothermobacter marburgensis str. Marburg] gi|5734542|emb|CAB52771.1| polyferredoxin [Methanothermobacter thermautotrophicus] gi|302588019|gb|ADL58394.1| energy-converting hydrogenase A, subunit P [Methanothermobacter marburgensis str. Marburg] Length = 340 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 3 YVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 YV+ + CI C C++ CPVD E + + I CI CG C +CPV Sbjct: 125 YVIDDYLCIRC--RKCMKACPVDAIVEEDGRVEIDQSRCIACGDCLEKCPV 173 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 18/72 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCE 47 +V CI C C EVCP D E I CI C C Sbjct: 82 IVRGACIRCGF--CAEVCPTDPKTIECGENHLIREEFTIVPSEKLYVIDDYLCIRCRKCM 139 Query: 48 PECPVDAIKPDT 59 CPVDAI + Sbjct: 140 KACPVDAIVEED 151 Score = 41.3 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVD 53 E C+ C CV+ CP E+ + P++C+ C C CP Sbjct: 263 EKCVQC--RLCVDECPSGAITYSEDEGVVRDPEKCLRCSTCYQTCPFG 308 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 13/58 (22%) Query: 7 ENCILCKHTDCVEVCPV-DCFY----------EGENFLAIHPDECIDCGVCEPECPVD 53 E CI C C CP EG + I CI CG C CP D Sbjct: 45 EYCIGCG--ACTTACPAPGAIKLVRDTDTSEEEGLTYPVIVRGACIRCGFCAEVCPTD 100 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPG 62 P++C+ C +C ECP AI + G Sbjct: 262 PEKCVQCRLCVDECPSGAITYSEDEG 287 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 31 NFLAIHPDECIDCGVCEPECPV-DAIK 56 +F +H + CI CG C CP AIK Sbjct: 38 DFPTVHKEYCIGCGACTTACPAPGAIK 64 >gi|17230004|ref|NP_486552.1| transcriptional regulator [Nostoc sp. PCC 7120] gi|423971|pir||A47082 probable transcription regulator PatB - Anabaena sp gi|142067|gb|AAB59013.1| PatB [Nostoc sp. PCC 7120] gi|17131604|dbj|BAB74211.1| transcriptional regulator [Nostoc sp. PCC 7120] Length = 529 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 9/64 (14%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVD 53 M Y + N C+ C +C CP N I P C +C G C CPV Sbjct: 1 MPYTIPNNSCVGCD--NCRPQCPTGAIKIENNKYWIDPSLCNNCEGYYAEPQCVIACPVK 58 Query: 54 AIKP 57 + P Sbjct: 59 SPIP 62 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I + C+ C C P+CP AIK + Sbjct: 3 YTIPNNSCVGCDNCRPQCPTGAIKIENNKYW 33 >gi|325294615|ref|YP_004281129.1| NADH dehydrogenase (quinone) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065063|gb|ADY73070.1| NADH dehydrogenase (quinone) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 639 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ E C C T C CPV+ Y E + I CI CG C C DA++ Sbjct: 578 IIQEACKGC--TVCALKCPVNAIYGERKKPHVIDQSACIKCGACLEVCKFDAVR 629 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 17/63 (26%) Query: 3 YVVTENCIL--CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +VV + C CK I + C C VC +CPV+AI + + Sbjct: 559 HVVNKRCPGKVCKDLI---------------QYVIIQEACKGCTVCALKCPVNAIYGERK 603 Query: 61 PGL 63 Sbjct: 604 KPH 606 >gi|331659015|ref|ZP_08359957.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA206] gi|315295673|gb|EFU54993.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 16-3] gi|331053597|gb|EGI25626.1| putative oxidoreductase, Fe-S subunit [Escherichia coli TA206] Length = 644 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV + + ++ +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVYALTFQADSVQLNEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|307262756|ref|ZP_07544383.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871901|gb|EFN03618.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 196 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + + PD C C +C CP + I+ Sbjct: 107 DMCIGC--TKCIQACPVDAIIGTNKAMHTVIPDLCTGCELCVAPCPTNCIE 155 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 IH D CI C C CPVDAI Sbjct: 104 IHEDMCIGCTKCIQACPVDAI 124 >gi|205355049|ref|YP_002228850.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274830|emb|CAR39890.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|204929685|ref|ZP_03220759.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321404|gb|EDZ06604.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322613728|gb|EFY10667.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619529|gb|EFY16405.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625034|gb|EFY21863.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629523|gb|EFY26299.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634046|gb|EFY30783.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635516|gb|EFY32227.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639808|gb|EFY36487.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644430|gb|EFY40971.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648575|gb|EFY45024.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655205|gb|EFY51514.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658252|gb|EFY54518.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664253|gb|EFY60450.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669420|gb|EFY65569.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673147|gb|EFY69253.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676539|gb|EFY72607.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683289|gb|EFY79303.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685825|gb|EFY81818.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194768|gb|EFZ79956.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199544|gb|EFZ84635.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204681|gb|EFZ89679.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208129|gb|EFZ93074.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210147|gb|EFZ95048.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217015|gb|EGA01737.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221813|gb|EGA06217.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225008|gb|EGA09263.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229297|gb|EGA13421.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235388|gb|EGA19472.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237426|gb|EGA21489.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245180|gb|EGA29181.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248883|gb|EGA32809.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253170|gb|EGA37002.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255404|gb|EGA39172.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262037|gb|EGA45602.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266348|gb|EGA49836.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269821|gb|EGA53271.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 287 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDN 213 >gi|62182728|ref|YP_219145.1| putative nitrite reductase; formate-dependent, Fe-S centers [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224586045|ref|YP_002639844.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62130361|gb|AAX68064.1| putative nitrite reductase; formate-dependent, Fe-S centers [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224470573|gb|ACN48403.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322717228|gb|EFZ08799.1| Protein nrfC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326630202|gb|EGE36545.1| putative nitrite reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|83590232|ref|YP_430241.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573146|gb|ABC19698.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 195 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKP 57 Y ++ +C C+ CV+ CP + + + ++CI C C CP A + Sbjct: 61 AYWISLSCNHCQDPPCVKNCPTGAMQKRPEDGIVFVDQNKCIGCRYCVWSCPYGAPQY 118 >gi|89897650|ref|YP_521137.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89337098|dbj|BAE86693.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 204 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + C CPV Y E+ I D CI C C CP DA Sbjct: 65 CNHCDNAPCESACPVRATYRTEDGTILIDYDRCIGCKYCMAACPYDA 111 >gi|28898877|ref|NP_798482.1| electron transport complex protein RnfB [Vibrio parahaemolyticus RIMD 2210633] gi|260362455|ref|ZP_05775396.1| electron transport complex protein RnfB [Vibrio parahaemolyticus K5030] gi|260879450|ref|ZP_05891805.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AN-5034] gi|260897153|ref|ZP_05905649.1| electron transport complex protein RnfB [Vibrio parahaemolyticus Peru-466] gi|260902710|ref|ZP_05911105.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AQ4037] gi|33301642|sp|Q87MX3|RNFB_VIBPA RecName: Full=Electron transport complex protein rnfB gi|28807096|dbj|BAC60366.1| RnfB-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087155|gb|EFO36850.1| electron transport complex protein RnfB [Vibrio parahaemolyticus Peru-466] gi|308093524|gb|EFO43219.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AN-5034] gi|308109013|gb|EFO46553.1| electron transport complex protein RnfB [Vibrio parahaemolyticus AQ4037] gi|308113332|gb|EFO50872.1| electron transport complex protein RnfB [Vibrio parahaemolyticus K5030] Length = 198 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 +T W ++N+ Sbjct: 165 ETTTDSWKW-QLNA 177 >gi|113972044|ref|YP_735837.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886728|gb|ABI40780.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 553 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEVDPYLCHGAGSCSSACPTGAIGYDLPTPQALHSYLNKIINRY 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 >gi|322615434|gb|EFY12354.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618494|gb|EFY15383.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622094|gb|EFY18944.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627165|gb|EFY23957.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631125|gb|EFY27889.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637657|gb|EFY34358.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642468|gb|EFY39069.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643657|gb|EFY40211.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648271|gb|EFY44731.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654683|gb|EFY51003.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659643|gb|EFY55886.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662148|gb|EFY58364.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666106|gb|EFY62284.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672526|gb|EFY68637.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675955|gb|EFY72026.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680440|gb|EFY76478.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684666|gb|EFY80670.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194656|gb|EFZ79847.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323201742|gb|EFZ86806.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206256|gb|EFZ91218.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213267|gb|EFZ98069.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215638|gb|EGA00382.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222060|gb|EGA06446.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227927|gb|EGA12081.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229096|gb|EGA13225.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236294|gb|EGA20370.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237586|gb|EGA21647.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241748|gb|EGA25777.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248105|gb|EGA32042.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254565|gb|EGA38376.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258375|gb|EGA42052.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259655|gb|EGA43289.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265928|gb|EGA49424.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270370|gb|EGA53818.1| putative formate-dependent nitrite reductase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 223 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|320101426|ref|YP_004177018.1| ABC transporter-like protein [Desulfurococcus mucosus DSM 2162] gi|319753778|gb|ADV65536.1| ABC transporter related protein [Desulfurococcus mucosus DSM 2162] Length = 602 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Query: 17 CVEVCPVDCFYE-------GENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ CPV+ G+N I D CI CG+C +CP AI P Sbjct: 21 CIRFCPVNRGRRKKAIELSGDNKYVVISEDACIGCGICVKKCPFHAISIVNLPDE 75 >gi|307299220|ref|ZP_07579021.1| dihydroorotate dehydrogenase family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915016|gb|EFN45402.1| dihydroorotate dehydrogenase family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 359 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C CVEVCP + + + EC CG+CE CPV AI Sbjct: 309 DKCTRCGL--CVEVCPYFALSL-QEKVEVDSAECFGCGLCESICPVAAI 354 Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 34 AIHPDECIDCGVCEPECPVDA 54 I D+C CG+C CP A Sbjct: 305 VIDHDKCTRCGLCVEVCPYFA 325 >gi|168818248|ref|ZP_02830248.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344912|gb|EDZ31676.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086497|emb|CBY96268.1| Protein nrfC homolog Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 192 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|154150816|ref|YP_001404434.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999368|gb|ABS55791.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 128 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDA 54 V T C+ C C+ +CP + F ++ + LAI D CI CG C P CP A Sbjct: 74 VNTSECVDCG--ACISICPREVFSFDTDWKLAIAEDRCIVCGKCVPACPHSA 123 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E+ + ++ EC+DCG C CP + DT+ Sbjct: 69 EHGINVNTSECVDCGACISICPREVFSFDTD 99 >gi|153835285|ref|ZP_01987952.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio harveyi HY01] gi|148868221|gb|EDL67367.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio harveyi HY01] Length = 228 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 143 >gi|146312604|ref|YP_001177678.1| putative oxidoreductase Fe-S binding subunit [Enterobacter sp. 638] gi|145319480|gb|ABP61627.1| glutamate synthase, small subunit [Enterobacter sp. 638] Length = 658 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C++ C + CP + + ++ +CI C C CP Sbjct: 56 CHHCENAPCAQRCPNGAIARINDSVQVNQQKCIGCKACVVACPFG 100 >gi|94676609|ref|YP_588818.1| NADH dehydrogenase subunit I [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|110287758|sp|Q1LT96|NUOI_BAUCH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|94219759|gb|ABF13918.1| NADH-quinone oxidoreductase, chain I [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 180 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC EG F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCISLQKTESKEGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMAEF 125 >gi|293609132|ref|ZP_06691435.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829705|gb|EFF88067.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 180 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 LTPDFELGEYV 126 >gi|283853304|ref|ZP_06370553.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B] gi|283571285|gb|EFC19296.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B] Length = 421 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C C+ CP GE + P+ CI CG C CP AI + Sbjct: 35 CIGCD--ACLSYCPTGAIVGEMGEPHKIVAPEACIHCGQCLTHCPQGAIYEE 84 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 F+ + +CI C C CP AI + + Sbjct: 27 FVQVDESKCIGCDACLSYCPTGAIVGEMGEPHK 59 >gi|110643035|ref|YP_670765.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli 536] gi|110344627|gb|ABG70864.1| hypothetical protein YgfT (putative pyridine nucleotide-disulphide oxidoreductase) [Escherichia coli 536] Length = 639 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 21/57 (36%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVYALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|94309960|ref|YP_583170.1| ferredoxin [Cupriavidus metallidurans CH34] gi|93353812|gb|ABF07901.1| electron transport complex, RnfABCDGE type, B subunit [Cupriavidus metallidurans CH34] Length = 279 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 CI C T C++ CPVD + + PD C C +C CPVD I+ Sbjct: 91 CIGC--TLCIQACPVDAIVGAPKQMHTVLPDWCTGCDLCVTPCPVDCIE 137 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 86 IEESLCIGCTLCIQACPVDAI 106 >gi|304314315|ref|YP_003849462.1| glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] gi|302587774|gb|ADL58149.1| predicted glutamate synthase, large subunit [Methanothermobacter marburgensis str. Marburg] Length = 619 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C+ C C VCP D E+ I +CI CG C CPV Sbjct: 167 CVFCG--TCEIVCPTDAIEIVEDHAEIDKTKCIMCGSCLAACPV 208 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 19/52 (36%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C C D + I + C+ C +C CP+ AI + Sbjct: 45 CQQCVDPSCARGCFRDAIQRENGAVKIDQESCVGCKLCMLMCPIGAITYTDD 96 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECI----DCGVCEPEC 50 E+C+ CK C+ +CP+ ++ + +C+ D C C Sbjct: 74 ESCVGCKL--CMLMCPIGAITYTDDGMVKCDQQCMESPGDTPACVAAC 119 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 12/17 (70%) Query: 40 CIDCGVCEPECPVDAIK 56 C+ CG CE CP DAI+ Sbjct: 167 CVFCGTCEIVCPTDAIE 183 >gi|295106689|emb|CBL04232.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 171 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +VV C+ C++ C+ C V+ + + + I ++CI C C CP A Sbjct: 19 HVVPMLCMHCENAPCIAACAVEGATYKRDDGIVMIDKEKCIGCKACITACPYAARYYVES 78 Query: 61 PGLELWLKINSEYATQWPN 79 G ++N A +P Sbjct: 79 EGGYFGSELNEYEALMYPT 97 >gi|257452669|ref|ZP_05617968.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium sp. 3_1_5R] Length = 580 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 Y +T+ C+ C T C CPV I E CI CG+C C AI Sbjct: 526 YRITDKCVGC--TLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAI 577 >gi|160934825|ref|ZP_02082211.1| hypothetical protein CLOLEP_03700 [Clostridium leptum DSM 753] gi|156866278|gb|EDO59650.1| hypothetical protein CLOLEP_03700 [Clostridium leptum DSM 753] Length = 580 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI CK C+ + CP + + I +C+ CGVCE CP AI Sbjct: 525 VDNDKCIGCK--ACMAIGCP--AISQRDGKAVIDRTQCVGCGVCEGLCPKQAI 573 >gi|322378418|ref|ZP_08052872.1| ferredoxin [Helicobacter suis HS1] gi|322380977|ref|ZP_08055039.1| ferredoxin [Helicobacter suis HS5] gi|321146595|gb|EFX41433.1| ferredoxin [Helicobacter suis HS5] gi|321149174|gb|EFX43620.1| ferredoxin [Helicobacter suis HS1] Length = 97 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M+ +V + CI C C E CP D + + +I PD C +C G C CPVDA Sbjct: 15 MSLLVNQECIACD--ACREECPTDAIDQDDPIYSIDPDRCTECVGYSDEPGCVSVCPVDA 72 Query: 55 IKPD 58 I D Sbjct: 73 IILD 76 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 12/22 (54%) Query: 39 ECIDCGVCEPECPVDAIKPDTE 60 ECI C C ECP DAI D Sbjct: 22 ECIACDACREECPTDAIDQDDP 43 >gi|319760609|ref|YP_004124547.1| NADH-quinone oxidoreductase subunit I [Candidatus Blochmannia vafer str. BVAF] gi|318039323|gb|ADV33873.1| NADH-quinone oxidoreductase subunit I [Candidatus Blochmannia vafer str. BVAF] Length = 181 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVSCPVGCISLKKSETIDGRWYPDFFRINFSRCIFCGMCEEACPTAAIQ 116 Query: 57 PDTEPGLELW 66 ++ + + Sbjct: 117 LISDFEMSDF 126 >gi|253572693|ref|ZP_04850094.1| quinone oxidoreductase [Bacteroides sp. 1_1_6] gi|251837825|gb|EES65915.1| quinone oxidoreductase [Bacteroides sp. 1_1_6] Length = 389 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV 52 E+C C + CV++CP C E+ FL I+ D C++C +CE CPV Sbjct: 8 EDCCGC--SACVQICPKCCISMYEDNEGFLYPEINKDICVNCHLCENVCPV 56 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ ++C C C CP I + L+ +IN + Sbjct: 5 INKEDCCGCSACVQICPKCCISMYEDNEGFLYPEINKD 42 >gi|239909239|ref|YP_002955981.1| nucleotide-disulphide oxidoreductase family protein [Desulfovibrio magneticus RS-1] gi|239799106|dbj|BAH78095.1| nucleotide-disulphide oxidoreductase family protein [Desulfovibrio magneticus RS-1] Length = 777 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Query: 8 NCILCKHTDCVEVCPVDCF----YEGENF-LAIHPDECIDCGVCEPECP 51 C C C +CPV EG+ F + P++CI CG C CP Sbjct: 717 ACRDCGL--CETLCPVGAISRQQKEGKEFAMVSDPEKCIGCGFCANACP 763 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 39 ECIDCGVCEPECPVDAIKPDTEPGLE 64 C DCG+CE CPV AI + G E Sbjct: 717 ACRDCGLCETLCPVGAISRQQKEGKE 742 >gi|226330215|ref|ZP_03805733.1| hypothetical protein PROPEN_04128 [Proteus penneri ATCC 35198] gi|225201010|gb|EEG83364.1| hypothetical protein PROPEN_04128 [Proteus penneri ATCC 35198] Length = 208 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +NCI C T C++ CPVD + + D C C +C P CP D I Sbjct: 115 DNCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVPPCPTDCI 162 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D CI C C CPVDAI Sbjct: 112 IDEDNCIGCTKCIQACPVDAI 132 >gi|239624057|ref|ZP_04667088.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47_FAA] gi|239522088|gb|EEQ61954.1| 4Fe-4S ferredoxin [Clostridiales bacterium 1_7_47FAA] Length = 366 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V C+ C CV C +I C CG C CP+DA+ D Sbjct: 188 PHVDAGLCVGCG--ACVRQCAHGAITLESGKASIDTAVCAGCGRCIGTCPMDAVAADNNE 245 Query: 62 GLELWLKINSEYA 74 ++ K +EYA Sbjct: 246 ANDILNKKIAEYA 258 >gi|87118384|ref|ZP_01074283.1| electron transport complex protein RnfB [Marinomonas sp. MED121] gi|86166018|gb|EAQ67284.1| electron transport complex protein RnfB [Marinomonas sp. MED121] Length = 198 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 112 DECIGC--TKCIQACPVDAILGAAKQMHTVISDECTGCDLCVEPCPVDCI 159 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 108 VIREDECIGCTKCIQACPVDAI 129 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+++ C C CVE CPVDC Sbjct: 136 MHTVISDECTGCDL--CVEPCPVDCI 159 >gi|170717801|ref|YP_001784864.1| electron transporter subunit RnfB [Haemophilus somnus 2336] gi|168825930|gb|ACA31301.1| electron transport complex, RnfABCDGE type, B subunit [Haemophilus somnus 2336] Length = 196 Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ E CI C T C++ CPVD + I D C C +C CP D I Sbjct: 106 AFINEEMCIGC--TKCIQACPVDAIIGTNKAMHTIIADLCTGCELCVAPCPTDCI 158 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I+ + CI C C CPVDAI Sbjct: 103 PKVAFINEEMCIGCTKCIQACPVDAI 128 >gi|291546305|emb|CBL19413.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Ruminococcus sp. SR1/5] Length = 623 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 ++ E CI C C + CP I+ D CI CG C+ C DAI + Sbjct: 568 HINPEFCIGCG--KCAKNCPTGAISGKIKHPHVINNDVCIKCGSCKDNCNFDAIYVE 622 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 13/25 (52%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I+P+ CI CG C CP AI Sbjct: 565 RQFHINPEFCIGCGKCAKNCPTGAI 589 >gi|293409983|ref|ZP_06653559.1| ferredoxin protein ydhX [Escherichia coli B354] gi|291470451|gb|EFF12935.1| ferredoxin protein ydhX [Escherichia coli B354] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|268678907|ref|YP_003303338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268616938|gb|ACZ11303.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 190 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++C+ C++T CV VCP ++ E+ + + D C+ C C CP A D Sbjct: 58 QSCVHCENTPCVNVCPTHASFKNEDGIVLVDVDLCVGCLYCVAACPYQARYVD 110 >gi|227328565|ref|ZP_03832589.1| electron transport protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 173 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D + + + CI C C CP AI Sbjct: 57 CRQCENAPCASVCPNDALVRDRDSIQVIQSRCIGCKSCVVACPFGAI 103 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 18/92 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--------YEGENFL---AIHP-DECIDCGV---CEP 48 V+ CI CK CV CP EGE L +H D C+D C Sbjct: 83 VIQSRCIGCK--SCVVACPFGAINVVTKSSNNEGEAHLTKSEVHKCDLCVDVAQSPSCVS 140 Query: 49 ECPVDAIKPDTEPGLELW-LKINSEYATQWPN 79 CP A++ T L L+ A WP+ Sbjct: 141 VCPTSALRLVTADELRKQTLEKQRRSALGWPS 172 >gi|242766902|ref|XP_002341262.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218724458|gb|EED23875.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 225 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 181 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 182 ESP----------NAEYATETREELLYNKEKLLANGDKWE 211 >gi|218691012|ref|YP_002399224.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli ED1a] gi|218428576|emb|CAR09503.2| fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit [Escherichia coli ED1a] Length = 639 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV + + ++ +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVYALTFQADSVQLNEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|254448470|ref|ZP_05061930.1| electron transport complex, rnfaBcdge type, b subunit [gamma proteobacterium HTCC5015] gi|198261853|gb|EDY86138.1| electron transport complex, rnfaBcdge type, b subunit [gamma proteobacterium HTCC5015] Length = 200 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT-EPGLE 64 E CI C T C++ CPVD + + DEC C +C CPVD I + +P + Sbjct: 115 EGCIGC--TLCIQACPVDAILGAAKQMHTVITDECTGCELCVEPCPVDVITMEDIQPTTQ 172 Query: 65 LW 66 W Sbjct: 173 TW 174 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P+D + I + CI C +C CPVDAI Sbjct: 99 PLDAEERPPSVAVIEEEGCIGCTLCIQACPVDAI 132 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+T+ C C+ CVE CPVD Sbjct: 139 MHTVITDECTGCEL--CVEPCPVDVITM 164 >gi|183599995|ref|ZP_02961488.1| hypothetical protein PROSTU_03520 [Providencia stuartii ATCC 25827] gi|188022274|gb|EDU60314.1| hypothetical protein PROSTU_03520 [Providencia stuartii ATCC 25827] Length = 223 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 +C C+H CV+VCP + + ++PD C+ C C CP Sbjct: 91 SCQHCEHAPCVDVCPTGASFIDKTTGIVDVNPDLCVGCQYCIAACPY 137 >gi|161505257|ref|YP_001572369.1| hypothetical protein SARI_03397 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866604|gb|ABX23227.1| hypothetical protein SARI_03397 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 223 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|170743893|ref|YP_001772548.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methylobacterium sp. 4-46] gi|168198167|gb|ACA20114.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacterium sp. 4-46] Length = 320 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C + C+E CP ++ E + + + D C CG C P CP + Sbjct: 118 SDVCKHCHNAPCLEACPTGALFKTEFDTVVVQQDICNGCGYCVPACPFGVV 168 >gi|221069698|ref|ZP_03545803.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni KF-1] gi|220714721|gb|EED70089.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Comamonas testosteroni KF-1] Length = 433 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPVD +N + D+C C C CP +I Sbjct: 20 EICIRCN--TCEATCPVDAITHDDNNYVVMADKCNGCMDCISPCPTGSI 66 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPVDAI D Sbjct: 17 IDPEICIRCNTCEATCPVDAITHDDN 42 >gi|37526970|ref|NP_930314.1| NADH dehydrogenase subunit I [Photorhabdus luminescens subsp. laumondii TTO1] gi|81707635|sp|Q7N2J4|NUOI_PHOLL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|36786403|emb|CAE15456.1| NADH dehydrogenase I chain I (NADH-ubiquinone oxidoreductase chain 9) (NUO9) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 180 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|189499447|ref|YP_001958917.1| NADH dehydrogenase (quinone) [Chlorobium phaeobacteroides BS1] gi|189494888|gb|ACE03436.1| NADH dehydrogenase (quinone) [Chlorobium phaeobacteroides BS1] Length = 594 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 2 TYVVTEN-CILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 T+ + ++ C C + C CPVD + I D C++CG+C C DAI Sbjct: 536 THTIMQDTCTGC--SICERYCPVDAITGVIKKPESWVIDHDLCVNCGMCVEVCNSDAI 591 >gi|219670779|ref|YP_002461214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219541039|gb|ACL22778.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 201 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C + C CPV Y E+ I D CI C C CP DA Sbjct: 62 CNHCDNAPCESACPVRATYRTEDGTILIDYDRCIGCKYCMAACPYDA 108 >gi|309793436|ref|ZP_07687863.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 145-7] gi|308123023|gb|EFO60285.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 145-7] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|317057598|ref|YP_004106065.1| NADH dehydrogenase (quinone) [Ruminococcus albus 7] gi|315449867|gb|ADU23431.1| NADH dehydrogenase (quinone) [Ruminococcus albus 7] Length = 630 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 ++ + C C T C CP + +N I +CI CGVC C AI Sbjct: 577 IIADKCKGC--TLCARNCPANAITGTVKNPHVIDTTKCIKCGVCMNNCKFGAI 627 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I D+C C +C CP +AI Sbjct: 574 QYEIIADKCKGCTLCARNCPANAI 597 >gi|300918039|ref|ZP_07134661.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 115-1] gi|300414781|gb|EFJ98091.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 115-1] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|300904520|ref|ZP_07122360.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 84-1] gi|301303184|ref|ZP_07209310.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 124-1] gi|300403547|gb|EFJ87085.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 84-1] gi|300841593|gb|EFK69353.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 124-1] gi|315257527|gb|EFU37495.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 85-1] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|291326157|ref|ZP_06123425.2| anaerobic dimethyl sulfoxide reductase, B subunit [Providencia rettgeri DSM 1131] gi|291315461|gb|EFE55914.1| anaerobic dimethyl sulfoxide reductase, B subunit [Providencia rettgeri DSM 1131] Length = 161 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 +T +C C C++VCP D + + + + + ++CI C +C CP A D G Sbjct: 31 FITMSCNHCDDPQCLKVCPADTYTKRADGIVVQDHEKCIGCQMCIMACPYHAPVFDPAEG 90 >gi|254502148|ref|ZP_05114299.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] gi|222438219|gb|EEE44898.1| 4Fe-4S binding domain protein [Labrenzia alexandrii DFL-11] Length = 134 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 18 VEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 + VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 1 MAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQF 41 >gi|294656335|ref|XP_458595.2| DEHA2D02948p [Debaryomyces hansenii CBS767] gi|199431392|emb|CAG86730.2| DEHA2D02948p [Debaryomyces hansenii] Length = 243 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 142 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTVKYDIDMTKCIYCGYCQDSCPVDAI 198 >gi|169351160|ref|ZP_02868098.1| hypothetical protein CLOSPI_01939 [Clostridium spiroforme DSM 1552] gi|169292222|gb|EDS74355.1| hypothetical protein CLOSPI_01939 [Clostridium spiroforme DSM 1552] Length = 770 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C C C +CP C EG + I +CI CG C+ +CPV + Sbjct: 399 DQCTGCG--ACSVICPKQCISMKKNDEGFLYPVIDYHKCIHCGNCQRKCPVKNKYKEDNK 456 Query: 62 GLELWLKINSE 72 E + +N + Sbjct: 457 EPETYACMNKD 467 >gi|168242131|ref|ZP_02667063.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448056|ref|YP_002046112.1| 4Fe-4S binding domain-containing protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194406360|gb|ACF66579.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338597|gb|EDZ25361.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 192 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|167747724|ref|ZP_02419851.1| hypothetical protein ANACAC_02445 [Anaerostipes caccae DSM 14662] gi|167653086|gb|EDR97215.1| hypothetical protein ANACAC_02445 [Anaerostipes caccae DSM 14662] Length = 525 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 16 DCVEVCPVDCFYEGENFLA---IHPD-ECIDCGVCEPECPVDAIKPDTEPGLELW 66 C + CP C GEN + + PD +CI CG+C C AI E + + Sbjct: 404 PCQDACPKKCIKIGENITSLPAVDPDAQCIGCGMCVAACSGQAIFLVNEQFEKDY 458 >gi|262393887|ref|YP_003285741.1| NrfC protein [Vibrio sp. Ex25] gi|262337481|gb|ACY51276.1| NrfC protein [Vibrio sp. Ex25] Length = 228 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 143 >gi|114049274|ref|YP_739824.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113890716|gb|ABI44767.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 553 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 418 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + P C G C CP AI D L +N Sbjct: 198 CLNFCPADAISSVAKKIEVDPYLCHGAGSCSSACPTGAIGYDLPTPQALHSYLNKIINRY 257 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 258 REQAQTAPVI 267 >gi|312879492|ref|ZP_07739292.1| glycyl-radical enzyme activating protein family [Aminomonas paucivorans DSM 12260] gi|310782783|gb|EFQ23181.1| glycyl-radical enzyme activating protein family [Aminomonas paucivorans DSM 12260] Length = 301 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C CVE CP + + + C+ CGVC CP A++ Sbjct: 53 DRCIGCG--RCVESCPHKALSFVNDGVHVDLSRCVGCGVCASVCPSLALE 100 >gi|295394365|ref|ZP_06804589.1| formate dehydrogenase-N, beta subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294972717|gb|EFG48568.1| formate dehydrogenase-N, beta subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 356 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ C C H C++VCP + E + + D C CG C CP I+ + Sbjct: 158 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQNDVCNGCGTCVAGCPFGVIERRDD 213 >gi|300901520|ref|ZP_07119591.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 198-1] gi|284921593|emb|CBG34665.1| putative oxidoreductase Fe-S subunit [Escherichia coli 042] gi|300355050|gb|EFJ70920.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 198-1] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|167551004|ref|ZP_02344759.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324031|gb|EDZ11870.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 192 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|161502772|ref|YP_001569884.1| hypothetical protein SARI_00823 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864119|gb|ABX20742.1| hypothetical protein SARI_00823 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 198 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 69 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 114 >gi|51473963|ref|YP_067720.1| NADH dehydrogenase subunit I [Rickettsia typhi str. Wilmington] gi|81389938|sp|Q68VV4|NUOI_RICTY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|51460275|gb|AAU04238.1| NADH dehydrogenase (ubiquinone) subunit I [Rickettsia typhi str. Wilmington] Length = 159 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E ++ I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAVCPAQAIVIESDERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 58 ERCIACKLCEAVCPAQAIVIESDERDD 84 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|17545725|ref|NP_519127.1| ferredoxin [Ralstonia solanacearum GMI1000] gi|17428019|emb|CAD14708.1| probable ferredoxin [4fe-4s] protein [Ralstonia solanacearum GMI1000] Length = 268 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E CI C T C++ CPVD + D C C +C CPVD I D P Sbjct: 88 ERCIGC--TLCIQACPVDAIVGAPKAMHVVLEDWCTGCDLCVAPCPVDCI--DMVPATGE 143 Query: 66 WLKINS 71 N+ Sbjct: 144 RTGWNA 149 Score = 41.3 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 85 IDPERCIGCTLCIQACPVDAI 105 >gi|327542557|gb|EGF29031.1| molybdopterin oxidoreductase, iron sulfur subunit [Rhodopirellula baltica WH47] Length = 598 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-FLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C+ C+ CPV + + + H D+CI C C CP + K Sbjct: 151 VTTACHHCEDPGCLNGCPVKAYDKDPETGIVRHLDDQCIGCKYCTMMCPYEVPKY 205 >gi|325833701|ref|ZP_08166116.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325485241|gb|EGC87711.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 381 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 3 YVVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 Query: 58 DTEPGLEL 65 +L Sbjct: 80 LRPLDEDL 87 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGEN-FLAIHPDECIDCGVCEPEC 50 T+ C C C CP EGE FL +C+ C +C C Sbjct: 290 TQACSSCN--MCTVFCPTGALRKSELVPAEGEGSFLEFSAADCVQCNLCADAC 340 >gi|187733460|ref|YP_001881530.1| formate hydrogenlyase subunit B [Shigella boydii CDC 3083-94] gi|187430452|gb|ACD09726.1| formate hydrogenlyase, subunit B [Shigella boydii CDC 3083-94] gi|320173423|gb|EFW48622.1| Formate hydrogenlyase subunit 2 [Shigella dysenteriae CDC 74-1112] gi|320186510|gb|EFW61238.1| Formate hydrogenlyase subunit 2 [Shigella flexneri CDC 796-83] Length = 203 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QLCHHCEDAPCAVVCPVNVITRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|200387861|ref|ZP_03214473.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604959|gb|EDZ03504.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 192 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|167991837|ref|ZP_02572936.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205329900|gb|EDZ16664.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332989454|gb|AEF08437.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 287 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C +C C CP + +N L I C CG C CP A++ Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALR 238 >gi|74316399|ref|YP_314139.1| ferredoxin protein [Thiobacillus denitrificans ATCC 25259] gi|74055894|gb|AAZ96334.1| probable ferredoxin protein [Thiobacillus denitrificans ATCC 25259] Length = 83 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C+ CP + +G+ I P++C +C C CPVD Sbjct: 1 MALMITDECINCDV--CLPECPNEAISQGDEIYIIDPNKCTECVGHFDTPQCVEVCPVDC 58 Query: 55 I-----KPDTEPGLEL 65 I P+T L+ Sbjct: 59 IPKNPSYPETPEQLQE 74 >gi|82777147|ref|YP_403496.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|188496456|ref|ZP_03003726.1| iron-sulfur cluster-binding protein [Escherichia coli 53638] gi|256018135|ref|ZP_05432000.1| putative oxidoreductase, Fe-S subunit [Shigella sp. D9] gi|293446045|ref|ZP_06662467.1| ferredoxin-like protein ydhX [Escherichia coli B088] gi|300819572|ref|ZP_07099765.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 107-1] gi|300924703|ref|ZP_07140651.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 182-1] gi|301326568|ref|ZP_07219907.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 78-1] gi|331653069|ref|ZP_08354074.1| putative oxidoreductase Fe-S subunit [Escherichia coli M718] gi|332279180|ref|ZP_08391593.1| conserved hypothetical protein [Shigella sp. D9] gi|81241295|gb|ABB62005.1| putative oxidoreductase, Fe-S subunit [Shigella dysenteriae Sd197] gi|188491655|gb|EDU66758.1| iron-sulfur cluster-binding protein [Escherichia coli 53638] gi|291322875|gb|EFE62303.1| ferredoxin-like protein ydhX [Escherichia coli B088] gi|300419130|gb|EFK02441.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 182-1] gi|300527820|gb|EFK48882.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 107-1] gi|300846730|gb|EFK74490.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 78-1] gi|324016534|gb|EGB85753.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 117-3] gi|331049167|gb|EGI21239.1| putative oxidoreductase Fe-S subunit [Escherichia coli M718] gi|332101532|gb|EGJ04878.1| conserved hypothetical protein [Shigella sp. D9] Length = 239 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|16760995|ref|NP_456612.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765394|ref|NP_461009.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141309|ref|NP_804651.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413035|ref|YP_150110.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167990974|ref|ZP_02572073.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229378|ref|ZP_02654436.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238800|ref|ZP_02663858.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168259639|ref|ZP_02681612.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194442552|ref|YP_002041331.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194468539|ref|ZP_03074523.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736046|ref|YP_002115097.1| 4Fe-4S binding domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250292|ref|YP_002147021.1| 4Fe-4S binding domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265686|ref|ZP_03165760.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361959|ref|YP_002141596.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213161811|ref|ZP_03347521.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425575|ref|ZP_03358325.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583790|ref|ZP_03365616.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213648906|ref|ZP_03378959.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850286|ref|ZP_03381184.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913454|ref|ZP_04657291.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825943|ref|ZP_06545102.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|60392917|sp|P0A1I1|PHSB_SALTY RecName: Full=Thiosulfate reductase electron transport protein phsB gi|60392918|sp|P0A1I2|PHSB_SALTI RecName: Full=Thiosulfate reductase electron transport protein phsB gi|25285316|pir||AC0763 thiosulfate reductase electron transport protein PhsB phsB [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|755677|gb|AAC36935.1| thiosulfate reductase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420595|gb|AAL20968.1| hydrogen sulfide production iron-sulfur subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503293|emb|CAD02425.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi] gi|29136936|gb|AAO68500.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127292|gb|AAV76798.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194401215|gb|ACF61437.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194454903|gb|EDX43742.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711548|gb|ACF90769.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197093436|emb|CAR58893.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213995|gb|ACH51392.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243941|gb|EDY26561.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288421|gb|EDY27802.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205330523|gb|EDZ17287.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335941|gb|EDZ22705.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205351209|gb|EDZ37840.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261247278|emb|CBG25102.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994114|gb|ACY88999.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158625|emb|CBW18136.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913055|dbj|BAJ37029.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224709|gb|EFX49772.1| Thiosulfate reductase electron transport protein phsB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130387|gb|ADX17817.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988999|gb|AEF07982.1| thiosulfate reductase electron transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 192 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|16761396|ref|NP_457013.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140907|ref|NP_804249.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213650794|ref|ZP_03380847.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213864835|ref|ZP_03386954.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289828737|ref|ZP_06546527.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25387629|pir||AC0816 probable oxidoreductase STY2717 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503695|emb|CAD07709.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136532|gb|AAO68098.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 619 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|220931054|ref|YP_002507962.1| putative PAS/PAC sensor protein [Halothermothrix orenii H 168] gi|219992364|gb|ACL68967.1| putative PAS/PAC sensor protein [Halothermothrix orenii H 168] Length = 571 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 1 MTYVVTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M V+T C C C+ CPV + + D CI CG C CP +A Sbjct: 1 MGLVITSEAKCRDC--YKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNA 54 >gi|125972856|ref|YP_001036766.1| hydrogenase large subunit-like protein [Clostridium thermocellum ATCC 27405] gi|256005726|ref|ZP_05430681.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 2360] gi|281417055|ref|ZP_06248075.1| Fe-S cluster domain protein [Clostridium thermocellum JW20] gi|125713081|gb|ABN51573.1| hydrogenase large subunit-like protein [Clostridium thermocellum ATCC 27405] gi|255990299|gb|EEU00426.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 2360] gi|281408457|gb|EFB38715.1| Fe-S cluster domain protein [Clostridium thermocellum JW20] gi|316940906|gb|ADU74940.1| Fe-S cluster domain protein [Clostridium thermocellum DSM 1313] Length = 448 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKH-TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + VT + + CK T+C++ CP + ++ I + CIDCG C CP A K T+P Sbjct: 6 HSVTLDEVKCKGCTNCIKRCPTEAIRVRKSKARIINERCIDCGECIRVCPYHAKKAITDP 65 >gi|325921027|ref|ZP_08182908.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas gardneri ATCC 19865] gi|325548476|gb|EGD19449.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas gardneri ATCC 19865] Length = 143 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 85 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 138 >gi|317010558|gb|ADU84305.1| ferrodoxin [Helicobacter pylori SouthAfrica7] Length = 83 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYSDEPSCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|283853883|ref|ZP_06371097.1| nitroreductase [Desulfovibrio sp. FW1012B] gi|283570725|gb|EFC18771.1| nitroreductase [Desulfovibrio sp. FW1012B] Length = 300 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 22/64 (34%), Gaps = 2/64 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C CV +CP L CI CG CE CP A+ + Sbjct: 10 AEACQGCG--ACVALCPSGVLAFAGGRLVARQTGCIGCGHCEAVCPAGAVTLPGDDWAAS 67 Query: 66 WLKI 69 + I Sbjct: 68 FSTI 71 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 8/19 (42%) Query: 35 IHPDECIDCGVCEPECPVD 53 I + C CG C CP Sbjct: 8 IDAEACQGCGACVALCPSG 26 >gi|262369340|ref|ZP_06062668.1| NADH-quinone oxidoreductase subunit I [Acinetobacter johnsonii SH046] gi|262315408|gb|EEY96447.1| NADH-quinone oxidoreductase subunit I [Acinetobacter johnsonii SH046] Length = 180 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 MTPDFELGEYV 126 >gi|257466530|ref|ZP_05630841.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 580 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 Y +T+ C+ C T C CPV I E CI CG+C C AI Sbjct: 526 YRITDKCVGC--TLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAI 577 >gi|242399111|ref|YP_002994535.1| Putative oxidoreductase, Fe-S subunit [Thermococcus sibiricus MM 739] gi|242265504|gb|ACS90186.1| Putative oxidoreductase, Fe-S subunit [Thermococcus sibiricus MM 739] Length = 183 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + C+ C CV+ CPVD E + + ++CI+CG C CP + T+ G Sbjct: 62 VPQTCVQCPDYPCVKACPVDALSVNEKTGAVLVDEEKCIECGACITACPGKVPRIPTDKG 121 >gi|269792085|ref|YP_003316989.1| NADH dehydrogenase (quinone) [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099720|gb|ACZ18707.1| NADH dehydrogenase (quinone) [Thermanaerovibrio acidaminovorans DSM 6589] Length = 620 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V + C+ C C +VCP D + + C CG C CP+ A+ P Sbjct: 560 ARVEADLCVSCG--ACAKVCPFDAIHRDPSGKFAVDRRCEGCGACLDVCPMGALLP 613 Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 D C+ CG C CP DAI D Sbjct: 565 DLCVSCGACAKVCPFDAIHRD 585 >gi|268680480|ref|YP_003304911.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618511|gb|ACZ12876.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 212 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C VCP + + + + CI C +C CP AI D E Sbjct: 54 CRQCDDAPCANVCPTGALRIANSCVELCEEICIGCKLCTIACPYGAIVIDAE 105 >gi|220905362|ref|YP_002480674.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869661|gb|ACL49996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 653 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C++ CP E GE + C CG+C CP AI+ + Sbjct: 585 CVNCG--KCIQCCPFGAIKEVEVRGEGKAQVIETVCQGCGLCTATCPQGAIQLSHATDNQ 642 Query: 65 LWLKINS 71 + ++N+ Sbjct: 643 ILAEVNA 649 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 TYV C C C E CP D F E I+ C Sbjct: 235 TYVDWSLCTGCG--ACTEKCPSKKTPDAFNEEISNTTAITIAFPQAIPKKAVINAGHCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AIK D E Sbjct: 293 FIKGKCGVCAKICPTGAIKYDMEDE 317 >gi|212712690|ref|ZP_03320818.1| hypothetical protein PROVALCAL_03787 [Providencia alcalifaciens DSM 30120] gi|212684606|gb|EEB44134.1| hypothetical protein PROVALCAL_03787 [Providencia alcalifaciens DSM 30120] Length = 223 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 +C C+H CV+VCP + + ++PD C+ C C CP Sbjct: 91 SCQHCEHAPCVDVCPTGASFIDKTTGIVDVNPDLCVGCQYCIAACPY 137 >gi|296119426|ref|ZP_06837984.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Corynebacterium ammoniagenes DSM 20306] gi|295967309|gb|EFG80576.1| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit [Corynebacterium ammoniagenes DSM 20306] Length = 358 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C + C++VCP + E + + D C CG C CP I+ Sbjct: 128 SDVCKHCTNAGCLDVCPTGALFRTEFGTVVVQDDVCNGCGTCVAGCPFGVIE 179 >gi|262165248|ref|ZP_06032985.1| electron transport complex protein RnfB [Vibrio mimicus VM223] gi|262024964|gb|EEY43632.1| electron transport complex protein RnfB [Vibrio mimicus VM223] Length = 195 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|332086810|gb|EGI91946.1| glutamate synthase [NADPH] small chain [Shigella boydii 5216-82] Length = 491 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|323971874|gb|EGB67099.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 219 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 + + C+ C +CV VCPV + + D C C C CP + K D Sbjct: 108 IKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYD 163 >gi|296387990|ref|ZP_06877465.1| electron transport complex protein RnfB [Pseudomonas aeruginosa PAb1] Length = 188 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y+ CI C T C++ CPVD + + DEC C +C CPVD I+ Sbjct: 106 AYIREAECIGC--TKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEMRAT 163 Query: 61 PGL 63 P Sbjct: 164 PDD 166 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 22 PVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 P+D E I ECI C C CPVDAI Sbjct: 94 PLDAAEETPPRVAYIREAECIGCTKCIQACPVDAI 128 >gi|257790390|ref|YP_003180996.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474287|gb|ACV54607.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 381 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 3 YVVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 Query: 58 DTEPGLEL 65 +L Sbjct: 80 LRPLDEDL 87 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGEN-FLAIHPDECIDCGVCEPEC 50 T+ C C C CP EGE FL +C+ C +C C Sbjct: 290 TQACSSCN--MCTVFCPTGALRKSELVPAEGEGSFLEFSAADCVQCNLCADAC 340 >gi|193213037|ref|YP_001998990.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086514|gb|ACF11790.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobaculum parvum NCIB 8327] Length = 199 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP----DTEPGL 63 C+ C++T C+ CP + ++ + ++ D CI C C CP DA P D E Sbjct: 60 CMHCENTPCLSACPTGATHMNDDGIVLVNNDRCIGCYACCIACPYDARYPYDREDVEKEH 119 Query: 64 ELWLK 68 EL+ + Sbjct: 120 ELYGE 124 >gi|168261433|ref|ZP_02683406.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349505|gb|EDZ36136.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPS 246 >gi|198246136|ref|YP_002216149.1| 4Fe-4S binding domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940652|gb|ACH77985.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623895|gb|EGE30240.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|62180643|ref|YP_217060.1| hydrogen sulfide production: iron- sulfur subunit; electron transfer [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168466286|ref|ZP_02700156.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|62128276|gb|AAX65979.1| Hydrogen sulfide production: iron- sulfur subunit; electron transfer [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|195631429|gb|EDX49989.1| 4Fe-4S binding domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|322715114|gb|EFZ06685.1| hydrogen sulfide production: iron- sulfur subunit; electron transfer [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|11499962|ref|NP_071208.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|2650708|gb|AAB91278.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 182 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPD 58 C C+H CV VCP Y E+ + I D CI C C CP A I P+ Sbjct: 59 CQHCEHPGCVHVCPTGASYVNEDGIVLIDYDLCIGCKYCMVACPYLARYIHPE 111 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 24/81 (29%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH-----PDECIDCG---------VCEPECPV 52 + CI CK+ C+ CP IH PD+C C C CP Sbjct: 89 DLCIGCKY--CMVACPYLA-------RYIHPERHTPDKCTFCVHRVKEGKLPACVETCPA 139 Query: 53 DA-IKPDTEPGLELWLKINSE 72 +A I D + K+ +E Sbjct: 140 NARIFGDLDDPNSEVAKLVAE 160 >gi|312796966|ref|YP_004029888.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] gi|312168741|emb|CBW75744.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 355 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 V+ E CI C T C++ CPVD L + D C C +C CPVD I+ Sbjct: 113 VIDETVCIGC--TLCMQACPVDAIVGAPKQLHTVLADWCTGCDLCVAPCPVDCIE 165 Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 14/34 (41%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P + I CI C +C CPVDAI Sbjct: 101 PANGVERTRPRAVIDETVCIGCTLCMQACPVDAI 134 >gi|302392270|ref|YP_003828090.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302204347|gb|ADL13025.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C E CP E + I D+CI C +C CP+ I Sbjct: 53 CLHCEDPSCQEACPTGAINKIEETGAVVIDHDKCIGCNMCMMVCPIGII 101 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGV---CEPECPVDAIKPDTEPG 62 + CI C C+ VCP+ E + H +C CG C CP A++ Sbjct: 84 DKCIGCN--MCMMVCPIGIISTAETETSAHNSKCDLCGGEPECVEFCPTGALEYGRPDE 140 >gi|301026855|ref|ZP_07190255.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 69-1] gi|300395295|gb|EFJ78833.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 69-1] Length = 239 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|291245007|ref|XP_002742384.1| PREDICTED: NADH dehydrogenase iron-sulfur protein 8, mitochondrial-like [Saccoglossus kowalevskii] Length = 207 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 106 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGYCQEACPVDAI 162 Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD EG NF Sbjct: 147 CIYCGY--CQEACPVDAIVEGPNFEY 170 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 106 ERCIACKLCEAICPAQAITIEAEPRAD 132 >gi|227828775|ref|YP_002830555.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|229585982|ref|YP_002844484.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238620967|ref|YP_002915793.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|227460571|gb|ACP39257.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.14.25] gi|228021032|gb|ACP56439.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.27] gi|238382037|gb|ACR43125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|323475842|gb|ADX86448.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] gi|323478584|gb|ADX83822.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 89 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 V T+ C+ CK C +VCP + + I H + C++CG CP AIK G Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIIVHYERCLECGAALVACPYGAIKFRFPEG 82 Query: 63 LELW 66 + Sbjct: 83 GISY 86 >gi|223041240|ref|ZP_03611489.1| methyl-accepting chemotaxis sensory transducer [Campylobacter rectus RM3267] gi|222877499|gb|EEF12631.1| methyl-accepting chemotaxis sensory transducer [Campylobacter rectus RM3267] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ C++VCP Y+ + + + ECI C +C CP A Sbjct: 55 CNHCENPACIDVCPTGASYQRNSGIVKVDSAECIGCALCAEACPYHA 101 >gi|200388028|ref|ZP_03214640.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605126|gb|EDZ03671.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|126207654|ref|YP_001052879.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae L20] gi|307256192|ref|ZP_07537979.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126096446|gb|ABN73274.1| electron transport complex protein RnfB [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306865373|gb|EFM97269.1| Electron transport complex protein rnfB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 196 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C++ CPVD + + PD C C +C CP + I+ Sbjct: 107 DMCIGC--TKCIQACPVDAIIGTNKAMHTVIPDLCTGCELCVAPCPTNCIE 155 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 IH D CI C C CPVDAI Sbjct: 104 IHEDMCIGCTKCIQACPVDAI 124 >gi|146312827|ref|YP_001177901.1| electron transport protein HydN [Enterobacter sp. 638] gi|145319703|gb|ABP61850.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Enterobacter sp. 638] Length = 181 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAINRENGFVQVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|57641548|ref|YP_184026.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit F [Thermococcus kodakarensis KOD1] gi|57159872|dbj|BAD85802.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit F [Thermococcus kodakarensis KOD1] Length = 600 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 ++T+ C C T C CP + GE I + CI CG C C +AI+ Sbjct: 542 IITDKCTGC--TACAIFCPANAIS-GERLKPHFIDQEACIKCGTCYEVCRFNAIE 593 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 I D+C C C CP +AI + Sbjct: 540 YVIITDKCTGCTACAIFCPANAISGE 565 >gi|32477812|ref|NP_870806.1| oxidoreductase, Fe-S subunit [Rhodopirellula baltica SH 1] gi|32448369|emb|CAD77883.1| putative oxidoreductase, Fe-S subunit [Rhodopirellula baltica SH 1] Length = 620 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C C+ CP + E + + CI CG C CP I+ Sbjct: 502 QACMHCTDPVCMIGCPTGALHREESTGHVRVSESICIGCGTCAKGCPYGNIE 553 >gi|325524747|gb|EGD02729.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia sp. TJI49] Length = 84 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHDESH 69 >gi|325496502|gb|EGC94361.1| oxidoreductase Fe-S binding subunit [Escherichia fergusonii ECD227] Length = 659 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVNDSVQVNQQKCIGCKSCVIACPFG 100 >gi|301062518|ref|ZP_07203161.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300443375|gb|EFK07497.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 506 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 10/98 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C+ C CV CPV+ + + I D C CG C C A+ D+ P Sbjct: 3 VDVEKCVGCGF--CVRDCPVEAVHLVKKKAVI-EDHCTQCGACLKVCEYHALSRDSLPAE 59 Query: 64 ELWLKINSEYATQWPNITTKKESLPSA-AKMDGVKQKY 100 + + ++ P KE A + + V K Sbjct: 60 DA-VACDA-----CPIFCQVKEGYKGACHRFENVGGKL 91 >gi|254496015|ref|ZP_05108918.1| iron-sulfur cluster binding protein [Legionella drancourtii LLAP12] gi|254354764|gb|EET13396.1| iron-sulfur cluster binding protein [Legionella drancourtii LLAP12] Length = 204 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD G+ A+ EC CG+C CPVD I Sbjct: 83 ECIGC--TKCIKACPVDAIIGSGKLMHAVIAHECTGCGLCVAPCPVDCI 129 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 13/29 (44%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + I ECI C C CPVDAI Sbjct: 71 TRAPSVAVIREAECIGCTKCIKACPVDAI 99 >gi|226327835|ref|ZP_03803353.1| hypothetical protein PROPEN_01712 [Proteus penneri ATCC 35198] gi|225203539|gb|EEG85893.1| hypothetical protein PROPEN_01712 [Proteus penneri ATCC 35198] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV CP + E + + ++ D C+ C CE CP A + D Sbjct: 60 SYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDICVGCRYCELRCPYGAPQFDE 119 Query: 60 EPGL 63 + L Sbjct: 120 KKKL 123 >gi|197248415|ref|YP_002147480.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212118|gb|ACH49515.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|150020389|ref|YP_001305743.1| NADH dehydrogenase (quinone) [Thermosipho melanesiensis BI429] gi|149792910|gb|ABR30358.1| NADH dehydrogenase (quinone) [Thermosipho melanesiensis BI429] Length = 623 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C + C CP + E I ++CI CG+C +C +AI+ Sbjct: 568 YVINPELCKSC--SLCARACPQNAISGERGKPYVIDQEKCIKCGICFEKCKFNAIE 621 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPD 58 I+P+ C C +C CP +AI + Sbjct: 566 KKYVINPELCKSCSLCARACPQNAISGE 593 >gi|186470986|ref|YP_001862304.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phymatum STM815] gi|184197295|gb|ACC75258.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phymatum STM815] Length = 246 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C+ CV VCP + E+ L + D CI C C CP A + D E Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDYDRCIGCKYCSWACPYGAREIDEE 126 >gi|262393721|ref|YP_003285575.1| electron transport complex protein RnfB [Vibrio sp. Ex25] gi|262337315|gb|ACY51110.1| electron transport complex protein RnfB [Vibrio sp. Ex25] Length = 198 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G + + DEC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKAVHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|16765847|ref|NP_461462.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197262713|ref|ZP_03162787.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16421071|gb|AAL21421.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240968|gb|EDY23588.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|261247723|emb|CBG25551.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994646|gb|ACY89531.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159076|emb|CBW18590.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913514|dbj|BAJ37488.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222772|gb|EFX47843.1| Putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130855|gb|ADX18285.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|18313641|ref|NP_560308.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] gi|18161189|gb|AAL64490.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Pyrobaculum aerophilum str. IM2] Length = 188 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C + CV VCP Y+ + L + P+ CI C C CP +A D + GL Sbjct: 63 CQHCDNAPCVAVCPTGASYKDVDGLVKMRPELCIGCKYCMVACPYEARWLDEDTGL 118 >gi|107023264|ref|YP_621591.1| ferredoxin [Burkholderia cenocepacia AU 1054] gi|116690347|ref|YP_835970.1| ferredoxin [Burkholderia cenocepacia HI2424] gi|105893453|gb|ABF76618.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia AU 1054] gi|116648436|gb|ABK09077.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia HI2424] Length = 342 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 117 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCIPPCPVDCIAMLPV 174 Query: 59 --TEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 175 TGDRTGWDAWSQEQADAARE 194 >gi|330506329|ref|YP_004382757.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Methanosaeta concilii GP-6] gi|328927137|gb|AEB66939.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanosaeta concilii GP-6] Length = 368 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 2/69 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C C + CP + I C CG C CP A+ D + Sbjct: 192 AELCEGC--RACADGCPNQAITVKKKITQIDYSLCTGCGKCLRLCPAHALDFDWIVEVPP 249 Query: 66 WLKINSEYA 74 +++ EYA Sbjct: 250 FMERMVEYA 258 >gi|330468137|ref|YP_004405880.1| formate dehydrogenase subunit beta [Verrucosispora maris AB-18-032] gi|328811108|gb|AEB45280.1| formate dehydrogenase subunit beta [Verrucosispora maris AB-18-032] Length = 305 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C C++VCP + E + + D C CG C CP I + G Sbjct: 125 SDVCKHCTRAGCLDVCPTGALFRTEFGTVVVQEDICNGCGYCVSACPYGVIDRRVDDG 182 >gi|327542020|gb|EGF28519.1| cyclic nucleotide-binding protein [Rhodopirellula baltica WH47] Length = 620 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ C C+ CP + E + + CI CG C CP I+ Sbjct: 502 QACMHCTDPVCMIGCPTGALHREESTGHVRVSESICIGCGTCAKGCPYGNIE 553 >gi|323703247|ref|ZP_08114899.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531803|gb|EGB21690.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 234 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVC--EPECPVDA 54 E C+ C CV CP+ E+ L+I+ DEC++C +C CP +A Sbjct: 6 EKCLGCG--SCVPYCPMRALSIVEDQLSINHDECVECNICYRANVCPTEA 53 >gi|217968655|ref|YP_002353889.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|217505982|gb|ACK52993.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 215 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C+ C C VCP + + + L I D CI C C CP +A Sbjct: 57 ACMHCAEPPCAAVCPTEATQKRRDGLVTIDYDVCIGCANCVMACPYEA 104 >gi|217076475|ref|YP_002334191.1| dihydroorotate dehydrogenase family protein [Thermosipho africanus TCF52B] gi|217036328|gb|ACJ74850.1| dihydroorotate dehydrogenase family protein [Thermosipho africanus TCF52B] Length = 360 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C LCK C +VCP + + + P++C CG+CE CPV AI Sbjct: 311 EKCTLCK--ICEKVCPYFAITI-DTKVHVDPNKCFGCGLCESRCPVKAI 356 >gi|215486846|ref|YP_002329277.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O127:H6 str. E2348/69] gi|215264918|emb|CAS09304.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O127:H6 str. E2348/69] Length = 239 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + + A +P I Sbjct: 167 KCDFCAETRLAKGFPPIC 184 >gi|55742238|ref|NP_001006930.1| NADH dehydrogenase ubiquinone Fe-S 8 [Xenopus (Silurana) tropicalis] gi|50416643|gb|AAH77660.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus (Silurana) tropicalis] gi|89271932|emb|CAJ82191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus (Silurana) tropicalis] Length = 209 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 108 ERCIACKL--CEAVCPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 164 Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 108 ERCIACKLCEAVCPAQAITIEAEP 131 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 149 CIYCGF--CQEACPVDAIVEGPNF 170 >gi|89092706|ref|ZP_01165659.1| electron transport complex protein RnfB [Oceanospirillum sp. MED92] gi|89083218|gb|EAR62437.1| electron transport complex protein RnfB [Oceanospirillum sp. MED92] Length = 198 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 108 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIETECTGCDLCVEPCPVDCI 160 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGE---NFLAIHPDECIDCGVCEPECPVDAI 55 VE P++ E E I DECI C C CPVDAI Sbjct: 90 VEAIPLEGGVEEEPVKKVAYIREDECIGCTKCIQACPVDAI 130 >gi|293414987|ref|ZP_06657630.1| ferredoxin-like protein ydhX [Escherichia coli B185] gi|291432635|gb|EFF05614.1| ferredoxin-like protein ydhX [Escherichia coli B185] Length = 239 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 ++C C+ C++VCP + E + + +CI C C CP ++ + Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNSVTKVAD 166 Query: 66 WLKINSE--YATQWPNITTKKESLPSAAKMDGVKQKYE 101 +E A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|207857499|ref|YP_002244150.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206709302|emb|CAR33642.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|168238265|ref|ZP_02663323.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738104|ref|YP_002115589.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713606|gb|ACF92827.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288840|gb|EDY28213.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|167771609|ref|ZP_02443662.1| hypothetical protein ANACOL_02981 [Anaerotruncus colihominis DSM 17241] gi|167666249|gb|EDS10379.1| hypothetical protein ANACOL_02981 [Anaerotruncus colihominis DSM 17241] Length = 274 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C C +N +I P++C++CG C CP AI Sbjct: 216 CIGCK--KCERTCEHGAITVTDNLASIDPEKCVNCGNCVTACPTGAI 260 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 16/43 (37%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + DC+ C + I C+ CG+C CP I Sbjct: 144 GYGDCINACQYGAISIVDGIAVIDKAACVGCGMCAKACPNQLI 186 >gi|85860137|ref|YP_462339.1| ferridoxin [Syntrophus aciditrophicus SB] gi|85723228|gb|ABC78171.1| ferridoxin [Syntrophus aciditrophicus SB] Length = 137 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 T+ C+ C C CP D + + P+ C CG+C CP A++ Sbjct: 82 TDKCVHCG--ACTAFCPTDALHMDRETMKVVFDPELCNGCGICVTACPARAME 132 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 + D+C+ CG C CP DA+ D E Sbjct: 81 NTDKCVHCGACTAFCPTDALHMDRE 105 >gi|32266484|ref|NP_860516.1| ferredoxin [Helicobacter hepaticus ATCC 51449] gi|32262535|gb|AAP77582.1| ferredoxin [Helicobacter hepaticus ATCC 51449] Length = 83 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++ CI C C E CP EG+ +I PD C +C C CPVDA Sbjct: 1 MSLMINNECIACD--ACAEECPNGAIEEGDPIYSIDPDVCTECVGSYDEPSCLSVCPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDPD 64 >gi|54309051|ref|YP_130071.1| iron-sulfur cluster-binding protein [Photobacterium profundum SS9] gi|46913483|emb|CAG20269.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum SS9] Length = 581 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 T++C LC CV VCP F+ G L + ++CI CG+CE CP Sbjct: 446 TDDCTLC--MSCVAVCPTRAFHAVGGRPGLQLIEEDCIQCGLCEKACP 491 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 19/48 (39%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CV+ CP + + I+P C G C CP +AI + Sbjct: 213 CVDACPAGALSSIGHAIEINPYLCQGVGTCATACPTEAITYALPDPEK 260 >gi|326799008|ref|YP_004316827.1| NAD(P)H-quinone oxidoreductase subunit I [Sphingobacterium sp. 21] gi|326549772|gb|ADZ78157.1| NAD(P)H-quinone oxidoreductase subunit I [Sphingobacterium sp. 21] Length = 169 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 19/78 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 72 ERCTACGL--CALSCPAEAITMISAERKKGEEHLYREEKYAAVYEINMLRCIFCGLCEEA 129 Query: 50 CPVDAIKPDTEPGLELWL 67 CP +AI D +L Sbjct: 130 CPKEAIYLDGPHVPADYL 147 >gi|322832829|ref|YP_004212856.1| electron transport complex, RnfABCDGE type, B subunit [Rahnella sp. Y9602] gi|321168030|gb|ADW73729.1| electron transport complex, RnfABCDGE type, B subunit [Rahnella sp. Y9602] Length = 188 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 AYIDESNCIGC--TKCIQACPVDAIVGATRAVHTVITDLCTGCDLCVAPCPTDCIE 162 >gi|307596266|ref|YP_003902583.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551467|gb|ADN51532.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Vulcanisaeta distributa DSM 14429] Length = 445 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C +CV CP + N + I+ CI+CG+C CP A Sbjct: 115 GCG--ECVNACPANAISIVNNRVTINESACIECGLCVSRCPTGA 156 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF----LAIHPDECIDCGVCEPECPVDAIKPD 58 +V C C C CP F G + L ++ +CI CG C CP AI D Sbjct: 309 HVDDVKCSFCGV--CFAKCPERAFDVGRDGNKTVLKLNNLKCIGCGYCARLCPEKAITVD 366 >gi|302871907|ref|YP_003840543.1| Fe-S cluster domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574766|gb|ADL42557.1| Fe-S cluster domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 443 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 DKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + D+C C C CP +AI+ Sbjct: 9 LDKDKCKGCTNCIKRCPTEAIR 30 >gi|167549451|ref|ZP_02343210.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168466721|ref|ZP_02700575.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821497|ref|ZP_02833497.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195630838|gb|EDX49430.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205325401|gb|EDZ13240.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205342030|gb|EDZ28794.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087023|emb|CBY96792.1| NADH-quinone oxidoreductase subunits H/I NADH dehydrogenase I subunits H/I; NDH-1 subunit H/I [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|15896602|ref|NP_349951.1| nitroreductase family protein [Clostridium acetobutylicum ATCC 824] gi|15026443|gb|AAK81291.1|AE007833_4 Nitroreductase family protein fused to ferredoxin domain [Clostridium acetobutylicum ATCC 824] gi|325510763|gb|ADZ22399.1| Nitroreductase family protein fused to ferredoxin domain [Clostridium acetobutylicum EA 2018] Length = 273 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 1 MTYVVTENCILCKHTDCVEVC-PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V E CI C CV+ C P D + I+ + CI CG C CP++A+ D Sbjct: 1 MMTVDIEKCIGCG--KCVKDCFPKD-IEIVDGKAKINNETCIKCGHCIAVCPMNAVSTDD 57 Query: 60 EPGLELWLKINSEYA 74 + + N E Sbjct: 58 Y-DMSEVKEYNKEEF 71 >gi|3929358|sp|O24143|NDUS8_TOBAC RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=Complex I-28.5kD; Short=CI-28.5kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|1666177|emb|CAA70326.1| NADH dehydrogenase [Nicotiana tabacum] Length = 230 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEAREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 185 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 129 ERCIACKLCEAICPAQAITIEAEARED 155 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 170 CIYCGF--CQEACPVDAIVEGPNF 191 >gi|89896267|ref|YP_519754.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219667929|ref|YP_002458364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335715|dbj|BAE85310.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219538189|gb|ACL19928.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 182 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 M + + C+ C ++ CV+ CP + E+ + + ++C+ C C CP A Sbjct: 52 MVH-IPSLCMHCGNSPCVDACPTGASQQREDGIVWVEENKCVGCKACVMACPYGA 105 >gi|269216660|ref|ZP_06160514.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] gi|269129894|gb|EEZ60977.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] Length = 181 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 V+ C C C+ CPV + + EN + + D CI C C CP A Sbjct: 51 FVSMACNHCADPQCLANCPVGAYTKLENGIVVQDHDACIGCQTCVKACPYGAPHY 105 >gi|253989599|ref|YP_003040955.1| electron transport complex protein RnfB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781049|emb|CAQ84211.1| 4Fe-4S ferredoxin, iron-sulphur binding [Photorhabdus asymbiotica] Length = 205 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIVGATRAMHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|268589520|ref|ZP_06123741.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rettgeri DSM 1131] gi|291315189|gb|EFE55642.1| electron transport complex, RnfABCDGE type, B subunit [Providencia rettgeri DSM 1131] Length = 204 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 112 IDEENCIGCTKCIQACPVDAI 132 >gi|254461199|ref|ZP_05074615.1| formate dehydrogenase Fe-S subunit [Rhodobacterales bacterium HTCC2083] gi|206677788|gb|EDZ42275.1| formate dehydrogenase Fe-S subunit [Rhodobacteraceae bacterium HTCC2083] Length = 134 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 18 VEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 + VCPVDCFY+ E + +H D CI CG C CP A + Sbjct: 1 MAVCPVDCFYQNEEGVVLHSKDLCIGCGYCFYACPFGAPQF 41 >gi|168243307|ref|ZP_02668239.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449267|ref|YP_002046585.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198245772|ref|YP_002216591.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353626|ref|YP_002227427.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857935|ref|YP_002244586.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194407571|gb|ACF67790.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197940288|gb|ACH77621.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273407|emb|CAR38382.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205337655|gb|EDZ24419.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206709738|emb|CAR34090.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326624347|gb|EGE30692.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628726|gb|EGE35069.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 >gi|289523847|ref|ZP_06440701.1| conserved domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502503|gb|EFD23667.1| conserved domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 57 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C+ CV VCP + + + PD CI+CG C CPV AI Sbjct: 9 DTCIGCE--ACVGVCPAEAISIEDGKAKVDPDTCIECGACVSTCPVSAI 55 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDT 59 + D CI C C CP +AI + Sbjct: 5 VVDRDTCIGCEACVGVCPAEAISIED 30 >gi|224539450|ref|ZP_03679989.1| hypothetical protein BACCELL_04355 [Bacteroides cellulosilyticus DSM 14838] gi|224518955|gb|EEF88060.1| hypothetical protein BACCELL_04355 [Bacteroides cellulosilyticus DSM 14838] Length = 325 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQNTI 265 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVE C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVEACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKNIIE 189 >gi|161613328|ref|YP_001587293.1| hypothetical protein SPAB_01039 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362692|gb|ABX66460.1| hypothetical protein SPAB_01039 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|11497792|ref|NP_069014.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|2650470|gb|AAB91057.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 251 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C + CV+VCPV ++ E+ + + + CI C C CP + + E + Sbjct: 64 PCMHCDNPPCVKVCPVGATWKREDGVVLVDFERCIGCRYCMTACPYGVRQFNWEDKDK 121 >gi|15802083|ref|NP_288105.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|15831632|ref|NP_310405.1| oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|261227884|ref|ZP_05942165.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261258382|ref|ZP_05950915.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. FRIK966] gi|291282801|ref|YP_003499619.1| hypothetical protein G2583_2066 [Escherichia coli O55:H7 str. CB9615] gi|12515670|gb|AAG56658.1|AE005390_5 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13361845|dbj|BAB35801.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|209769268|gb|ACI82946.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209769270|gb|ACI82947.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209769274|gb|ACI82949.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|290762674|gb|ADD56635.1| Uncharacterized ferredoxin-like protein ydhX [Escherichia coli O55:H7 str. CB9615] gi|320641885|gb|EFX11253.1| hypothetical protein ECO5101_07322 [Escherichia coli O157:H7 str. G5101] gi|320647342|gb|EFX16150.1| hypothetical protein ECO9389_09063 [Escherichia coli O157:H- str. 493-89] gi|320652636|gb|EFX20905.1| hypothetical protein ECO2687_03555 [Escherichia coli O157:H- str. H 2687] gi|320653021|gb|EFX21217.1| hypothetical protein ECO7815_12485 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658705|gb|EFX26382.1| hypothetical protein ECO5905_08419 [Escherichia coli O55:H7 str. USDA 5905] gi|320668695|gb|EFX35500.1| hypothetical protein ECOSU61_21168 [Escherichia coli O157:H7 str. LSU-61] Length = 239 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|288560652|ref|YP_003424138.1| energy-converting hydrogenase A subunit Q EhaQ [Methanobrevibacter ruminantium M1] gi|288543362|gb|ADC47246.1| energy-converting hydrogenase A subunit Q EhaQ [Methanobrevibacter ruminantium M1] Length = 483 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIK 56 E CI C C+ VCP+D Y+ EN I DE C C +C CP DAI Sbjct: 23 EKCINCSDKPCLGVCPIDAVYQDENTKLIKLDEHCFGCVLCSNACPYDAIH 73 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEP 61 VV ENCI C C++VCP +G N + I D C+ CG+C C +AIK Sbjct: 343 VVEENCISCGL--CMDVCPTKSISLDGPNPIKIDTDNSCVYCGLCAEACNFEAIK----L 396 Query: 62 GLELWLKINSEYATQWPNITTKK 84 E + N E ++ ++ Sbjct: 397 AEEFFTNRNHEIFFIKRDLRGRR 419 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C LC+ C++ CPVD ++ + ++ DECI C CE CPV+A Sbjct: 429 ACQLCEV--CIKNCPVDAMSVEDDMITVNHDECISCRNCEGICPVNA 473 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 9 CILCKHTDCVEVCPVDCFY----EGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 C C CV C + GE I ++CI CG C CP DAIK Sbjct: 94 CRACG--ACVNACKSGAIHLKSTGGEEMHSEIDENKCIRCGYCFRACPTDAIKY 145 Score = 42.8 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPV-DAI 55 CI C + C CP D GE L I D+CI C C CP AI Sbjct: 128 CIRCGY--CFRACPTDAIKYGEILPKTVKEGKTLCIDHDQCIGCMTCTRICPSKGAI 182 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAI-KPDTEPG 62 + CI C C +CP G I P C C C CP AI + E Sbjct: 164 DQCIGC--MTCTRICPSKGAINVGKTNKLPFIDPAYCARCEECMHACPTYAIDYVEREEA 221 Query: 63 LELWLKI 69 E + KI Sbjct: 222 FESFNKI 228 >gi|258514656|ref|YP_003190878.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778361|gb|ACV62255.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 936 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C VCP N + I P +C CG+C ECP AI+ Sbjct: 869 CAACL--TCTRVCPYGIPRVINNKVFIDPVQCKGCGICTVECPHKAIE 914 >gi|225016113|ref|ZP_03705346.1| hypothetical protein CLOSTMETH_00057 [Clostridium methylpentosum DSM 5476] gi|224951110|gb|EEG32319.1| hypothetical protein CLOSTMETH_00057 [Clostridium methylpentosum DSM 5476] Length = 628 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 + C C T C CPV+ +N I P +CI CG C C +AI Sbjct: 578 DKCKGC--TLCARNCPVNAITGTVKNPHKIDPAKCIKCGACMERCKFNAI 625 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I D+C C +C CPV+AI Sbjct: 572 QYEILEDKCKGCTLCARNCPVNAI 595 >gi|224582936|ref|YP_002636734.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467463|gb|ACN45293.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|167757520|ref|ZP_02429647.1| hypothetical protein CLORAM_03070 [Clostridium ramosum DSM 1402] gi|167702517|gb|EDS17096.1| hypothetical protein CLORAM_03070 [Clostridium ramosum DSM 1402] Length = 371 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C C+++C + ++ +I D+C+ CG C CP DAI + Sbjct: 197 DKCIGCGQ--CIKICAHNGTSITDHKASIDHDKCVGCGRCIGVCPKDAIVASMDEA 250 >gi|164688745|ref|ZP_02212773.1| hypothetical protein CLOBAR_02392 [Clostridium bartlettii DSM 16795] gi|164602221|gb|EDQ95686.1| hypothetical protein CLOBAR_02392 [Clostridium bartlettii DSM 16795] Length = 573 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 C C CV VCPVD I D CI CG C CP Sbjct: 10 CRGC--YACVRVCPVDAIVIKGGQADILMDRCILCGRCSKACP 50 >gi|161505794|ref|YP_001572906.1| hypothetical protein SARI_03970 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867141|gb|ABX23764.1| hypothetical protein SARI_03970 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 157 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIHRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|119776308|ref|YP_929048.1| polysulfide reductase subunit B [Shewanella amazonensis SB2B] gi|119768808|gb|ABM01379.1| polysulfide reductase, subunit B [Shewanella amazonensis SB2B] Length = 188 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV+VCP Y G++ + I ++C+ C C CP Sbjct: 59 SCQQCEDAPCVKVCPTGAAYVGDDGIVSIKAEKCVGCMYCVAACPY 104 >gi|253690637|ref|YP_003019827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757215|gb|ACT15291.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 173 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D + + + CI C C CP AI Sbjct: 57 CRQCENAPCASVCPNDALVRDRDSIQVIQSRCIGCKSCVVACPFGAI 103 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 18/92 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENFL---AIHP-DECIDCGV---CEP 48 V+ CI CK CV CP EGE L +H D C D C Sbjct: 83 VIQSRCIGCK--SCVVACPFGAINVVTKASNDEGETHLTQSEVHKCDLCADVAQSPSCVS 140 Query: 49 ECPVDAIKPDTEPGLELW-LKINSEYATQWPN 79 CP A++ T L L+ A WP+ Sbjct: 141 VCPTSALRLVTADELRKQTLEKQRRSALGWPS 172 >gi|206901606|ref|YP_002250206.1| dihydroorotate dehydrogenase superfamily [Dictyoglomus thermophilum H-6-12] gi|206740709|gb|ACI19767.1| dihydroorotate dehydrogenase superfamily [Dictyoglomus thermophilum H-6-12] Length = 390 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + C C C +VC D E E I D C CG+C CPV AI Sbjct: 327 AYINPDLCTSCG--ICKKVCIYDAPVEKEGK-YIITDLCDGCGLCVKLCPVRAI 377 >gi|182413283|ref|YP_001818349.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Opitutus terrae PB90-1] gi|177840497|gb|ACB74749.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Opitutus terrae PB90-1] Length = 179 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPD 58 +E C C + CV CP ++ + + P++CI C C CP DA I PD Sbjct: 55 SERCNHCDNPPCVHCCPTGASHVHDRGGVVLVTPEKCIGCKACLAACPYDARFIHPD 111 >gi|221135173|ref|ZP_03561476.1| electron transport complex protein RnfB [Glaciecola sp. HTCC2999] Length = 193 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 Y+ CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 AYIREAECIGC--TKCIQACPVDAIIGASKQMHTVIVDECTGCDLCVAPCPVDCIDMLPV 164 Query: 58 -DTEPGLELWLKINSE 72 +T + L +++ Sbjct: 165 KETPQTWQWDLARSAD 180 >gi|90418565|ref|ZP_01226477.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90338237|gb|EAS51888.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 576 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V T+ C LC CV CP E+ L+ C+ CG+CE CP I + Sbjct: 416 HVQTDGCTLC--HACVTACPTGALSASEDRPLLSFSHGACVQCGLCESTCPEQVITLEPT 473 Query: 61 PGLELW 66 W Sbjct: 474 LDFAAW 479 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 15/40 (37%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C++ C + + I C CG C CP A Sbjct: 189 TRCLDACAMQAIAPAGEHVTIDAYVCAGCGNCAAVCPTGA 228 >gi|90411830|ref|ZP_01219839.1| putative dimethyl sulfoxide reductase chain B protein [Photobacterium profundum 3TCK] gi|90327392|gb|EAS43756.1| putative dimethyl sulfoxide reductase chain B protein [Photobacterium profundum 3TCK] Length = 205 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C CV CP ++ + + ++ + C+ C CE CP A + D E Sbjct: 60 YYLSISCNHCTEPACVSGCPTGAMHKRKEDGLVVVNQETCVGCRYCEMRCPYGAPQYDAE 119 >gi|14590966|ref|NP_143041.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Pyrococcus horikoshii OT3] gi|3257555|dbj|BAA30238.1| 618aa long hypothetical indolepyruvate ferredoxin oxidoreductase alpha subunit [Pyrococcus horikoshii OT3] Length = 618 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ + C CK + CP + + I C CG+C CP DAIK E Sbjct: 560 VIEDKCTGCKACILLSGCPALIYDPETRKVRIDELICTGCGICNQLCPFDAIKFREE 616 >gi|317487970|ref|ZP_07946553.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833273|ref|ZP_08165779.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|316912919|gb|EFV34445.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485655|gb|EGC88123.1| putative Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA-----IKPD 58 + C C++ C++VCPV Y+ + + IH D+CI C +C CP +A +P+ Sbjct: 61 IPVACQHCENPACLKVCPVGATYKDDMGRVEIHYDKCIGCRICMAACPYNARVFNWSEPE 120 Query: 59 TEPGL 63 +P Sbjct: 121 RDPNW 125 >gi|317488807|ref|ZP_07947340.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912112|gb|EFV33688.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 381 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 3 YVVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y+ ++ C++ ++ C + CP + N L + + C+ CG C CPV+A+ P Sbjct: 20 YLASDRCVVVRNRHASCAKCADACPTGSVFAANNVLELDGEGCVACGACTTVCPVEALIP 79 Query: 58 DTEPGLEL 65 +L Sbjct: 80 LRPLDEDL 87 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EGEN-FLAIHPDECIDCGVCEPEC 50 T+ C C C CP EGE FL +C+ C +C C Sbjct: 290 TQACSSCN--MCTVFCPTGALRKSELVPEEGEGSFLEFSAADCVQCNLCADAC 340 >gi|299066971|emb|CBJ38166.1| 4Fe-4S ferredoxin, iron-sulphur binding [Ralstonia solanacearum CMR15] Length = 268 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP----DTEP 61 E CI C T C++ CPVD + D C C +C CPVD I Sbjct: 88 ERCIGC--TLCIQACPVDAIVGAPKAMHVVLADWCTGCDLCVAPCPVDCIDMVPVTGERT 145 Query: 62 GLELWLKINSEYAT 75 G W + ++ A Sbjct: 146 GWNAWSQAQADEAR 159 Score = 41.3 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 85 IDPERCIGCTLCIQACPVDAI 105 >gi|290475910|ref|YP_003468805.1| NADH dehydrogenase I subunit I, 2Fe-2S ferredoxin-related [Xenorhabdus bovienii SS-2004] gi|289175238|emb|CBJ82041.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Xenorhabdus bovienii SS-2004] Length = 180 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|261867802|ref|YP_003255724.1| electron transport complex protein RnfB [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413134|gb|ACX82505.1| electron transport complex protein RnfB [Aggregatibacter actinomycetemcomitans D11S-1] Length = 196 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP I Sbjct: 106 AFIDENMCIGC--TKCIQACPVDAIIGTNKSMHTIIPDLCTGCELCVAPCPTSCI 158 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 103 PKVAFIDENMCIGCTKCIQACPVDAI 128 >gi|271498826|ref|YP_003331851.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270342381|gb|ACZ75146.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 184 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKP 57 C C+H C++ CPV+ + + E+ + +H P CI C C CP A K Sbjct: 56 ACNHCEHPACLDACPVEAYTKREDGIVVHDPARCIGCKNCLRSCPYGAPKF 106 >gi|255659582|ref|ZP_05404991.1| F420H2-dehydrogenase, beta subunit [Mitsuokella multacida DSM 20544] gi|260848141|gb|EEX68148.1| F420H2-dehydrogenase, beta subunit [Mitsuokella multacida DSM 20544] Length = 398 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 8 NCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEP 61 +C C C CP D EG + + D C +CG CE CPV + I + + Sbjct: 14 DCCGC--YACYNSCPFDAITMEEDAEGFRYPRVDADRCRNCGKCERNCPVLNPIVKEQDQ 71 Query: 62 GLELWLKINSEYA 74 + IN + A Sbjct: 72 TPPTYAAINKDEA 84 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 E +A + +C C C CP DAI + + + +++++ Sbjct: 5 EKMIAANRADCCGCYACYNSCPFDAITMEEDAEGFRYPRVDAD 47 >gi|227113884|ref|ZP_03827540.1| electron transport protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 173 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D + + + CI C C CP AI Sbjct: 57 CRQCENAPCASVCPNDALVRDRDSIQVIQSRCIGCKSCVVACPFGAI 103 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 18/92 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENFL---AIHP-DECIDCGV---CEP 48 V+ CI CK CV CP EGE L +H D C+D C Sbjct: 83 VIQSRCIGCK--SCVVACPFGAINVVTKASNDEGEAHLTQSEVHKCDLCVDVAQSPSCVS 140 Query: 49 ECPVDAIKPDTEPGLELW-LKINSEYATQWPN 79 CP A++ T L L+ A WP+ Sbjct: 141 VCPTSALRLVTADELRKQTLEKQRRSALGWPS 172 >gi|242280658|ref|YP_002992787.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123552|gb|ACS81248.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 304 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI C C+E CP + + + I P +C+ CGVC +C DA++ Sbjct: 236 AVVDPQKCIGCGQ--CMEYCPFGAMHLRDKRMRIDPKKCMGCGVCTNKCRKDALR 288 >gi|197285565|ref|YP_002151437.1| anaerobic dimethyl sulfoxide reductase subunit B [Proteus mirabilis HI4320] gi|227356062|ref|ZP_03840453.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] gi|194683052|emb|CAR43553.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis HI4320] gi|227163839|gb|EEI48747.1| anaerobic dimethyl sulfoxide reductase chain B [Proteus mirabilis ATCC 29906] Length = 205 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV CP + E + + ++ D C+ C CE CP A + D Sbjct: 59 SYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDE 118 Query: 60 EPGL 63 + L Sbjct: 119 KKKL 122 >gi|182413557|ref|YP_001818623.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Opitutus terrae PB90-1] gi|177840771|gb|ACB75023.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Opitutus terrae PB90-1] Length = 551 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 +T C C C+ CPV + + + H D+CI C C +CP DA K + Sbjct: 106 TITTACHHCADPACLNGCPVLAYEKDPLTGIVRHLDDQCIGCQYCILKCPYDAPKYNARL 165 Query: 62 G 62 G Sbjct: 166 G 166 >gi|171463534|ref|YP_001797647.1| NADH-quinone oxidoreductase, chain I [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193072|gb|ACB44033.1| NADH-quinone oxidoreductase, chain I [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 163 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G + I +CI CG CE CPVDAI Sbjct: 62 ERCIGCKL--CEAVCPAYAITIETAERDDGTRRTSRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +T + Sbjct: 62 ERCIGCKLCEAVCPAYAITIETAERDD 88 >gi|167761979|ref|ZP_02434106.1| hypothetical protein BACSTE_00324 [Bacteroides stercoris ATCC 43183] gi|167700211|gb|EDS16790.1| hypothetical protein BACSTE_00324 [Bacteroides stercoris ATCC 43183] Length = 277 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V TE C C + CV+ CP +G+ ++CI C C CP A DT Sbjct: 205 VDTELCNHCGY--CVKHCPAGAIVKGDECST-DVEKCIRCCACVKGCPQKARTFDTP--- 258 Query: 64 ELWLKINSEYATQ 76 + + ++ + Sbjct: 259 --FAALLADCFKK 269 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 12/31 (38%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 A+ + C CG C CP AI E Sbjct: 200 PRIPAVDTELCNHCGYCVKHCPAGAIVKGDE 230 >gi|108802182|ref|YP_642379.1| formate dehydrogenase beta subunit [Mycobacterium sp. MCS] gi|119871335|ref|YP_941287.1| formate dehydrogenase beta subunit [Mycobacterium sp. KMS] gi|108772601|gb|ABG11323.1| formate dehydrogenase beta subunit [Mycobacterium sp. MCS] gi|119697424|gb|ABL94497.1| formate dehydrogenase beta subunit [Mycobacterium sp. KMS] Length = 300 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 121 SDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 172 >gi|254976912|ref|ZP_05273384.1| electron transport protein [Clostridium difficile QCD-66c26] gi|255094298|ref|ZP_05323776.1| electron transport protein [Clostridium difficile CIP 107932] gi|255102480|ref|ZP_05331457.1| electron transport protein [Clostridium difficile QCD-63q42] gi|255308385|ref|ZP_05352556.1| electron transport protein [Clostridium difficile ATCC 43255] gi|255316052|ref|ZP_05357635.1| electron transport protein [Clostridium difficile QCD-76w55] gi|255518709|ref|ZP_05386385.1| electron transport protein [Clostridium difficile QCD-97b34] gi|255651831|ref|ZP_05398733.1| electron transport protein [Clostridium difficile QCD-37x79] gi|255657271|ref|ZP_05402680.1| electron transport protein [Clostridium difficile QCD-23m63] gi|260684857|ref|YP_003216142.1| electron transport protein [Clostridium difficile CD196] gi|260688515|ref|YP_003219649.1| electron transport protein [Clostridium difficile R20291] gi|296451876|ref|ZP_06893594.1| electron transporter HydN [Clostridium difficile NAP08] gi|296879728|ref|ZP_06903703.1| electron transporter HydN [Clostridium difficile NAP07] gi|306521618|ref|ZP_07407965.1| electron transport protein [Clostridium difficile QCD-32g58] gi|260211020|emb|CBA66338.1| electron transport protein [Clostridium difficile CD196] gi|260214532|emb|CBE07053.1| electron transport protein [Clostridium difficile R20291] gi|296259293|gb|EFH06170.1| electron transporter HydN [Clostridium difficile NAP08] gi|296429317|gb|EFH15189.1| electron transporter HydN [Clostridium difficile NAP07] Length = 171 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C + CP N + I+ + CI C C CP+ AI Sbjct: 59 CRHCEDAPCAKACPNGGIVRVGNTIKINEENCIGCKTCMLACPIGAI 105 >gi|293390124|ref|ZP_06634458.1| electron transport complex protein RnfB [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950658|gb|EFE00777.1| electron transport complex protein RnfB [Aggregatibacter actinomycetemcomitans D7S-1] Length = 196 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP I Sbjct: 106 AFIDENMCIGC--TKCIQACPVDAIIGTNKSMHTIIPDLCTGCELCVAPCPTSCI 158 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 103 PKVAFIDENMCIGCTKCIQACPVDAI 128 >gi|209731956|gb|ACI66847.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 109 ERCIACKLCEAVCPAQAITIEAE 131 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|126667558|ref|ZP_01738528.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter sp. ELB17] gi|126627984|gb|EAZ98611.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter sp. ELB17] Length = 211 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DTEPGLE 64 + CI C T C++ CPVD + + EC C +C CPVD I EP + Sbjct: 114 DECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVEPCPVDCIDMIVIEPDIR 171 Query: 65 LWL 67 W+ Sbjct: 172 SWI 174 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D + + + I DECI C C CPVDAI Sbjct: 91 VEPQPLDAEHGAAQAKRVAVIREDECIGCTKCIQACPVDAI 131 >gi|28867646|ref|NP_790265.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213967810|ref|ZP_03395957.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|301382447|ref|ZP_07230865.1| ferredoxin [Pseudomonas syringae pv. tomato Max13] gi|302061161|ref|ZP_07252702.1| ferredoxin [Pseudomonas syringae pv. tomato K40] gi|302132046|ref|ZP_07258036.1| ferredoxin [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850881|gb|AAO53960.1| ferredoxin [Pseudomonas syringae pv. tomato str. DC3000] gi|213927586|gb|EEB61134.1| ferredoxin [Pseudomonas syringae pv. tomato T1] gi|331014959|gb|EGH95015.1| ferredoxin [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 83 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I+P+ C +C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVINPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEP 61 I D Sbjct: 59 IPLDENH 65 >gi|86152690|ref|ZP_01070895.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843575|gb|EAQ60785.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter jejuni subsp. jejuni HB93-13] Length = 220 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C + C++ CP + + + I CI C C CP A + + E Sbjct: 67 AYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDSMCIGCKACAMACPYGAPQFNHE 126 Query: 61 PGL 63 G Sbjct: 127 SGH 129 >gi|90422688|ref|YP_531058.1| glycyl-radical activating protein [Rhodopseudomonas palustris BisB18] gi|90104702|gb|ABD86739.1| Glycyl-radical enzyme activating [Rhodopseudomonas palustris BisB18] Length = 306 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC+ C C EVCP EN I +CI CG C C A Sbjct: 60 NCVKCG--KCKEVCPTGAISP-ENPAFIDRSKCISCGTCANVCAYGA 103 Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 7/48 (14%) Query: 21 CPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CP+ C + E L C+ CG C+ CP AI P+ Sbjct: 35 CPLACRWCSNPESQKAEPSLFFQKANCVKCGKCKEVCPTGAISPENPA 82 >gi|118581974|ref|YP_903224.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504684|gb|ABL01167.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pelobacter propionicus DSM 2379] Length = 367 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + C C C++ C D + I +C C C CPV AI+ Sbjct: 189 VSAKACTGCGF--CLKSCAHDAIAINDGIAYIDALKCAGCSRCISVCPVRAIQVQWNEAA 246 Query: 64 ELWLKINSEYAT 75 +L ++ +EYA Sbjct: 247 DLVMRKMAEYAR 258 >gi|329898086|ref|ZP_08272295.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC3088] gi|328920958|gb|EGG28383.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC3088] Length = 198 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ + CI C T C++ CPVD + + EC C +C CPVD I + Sbjct: 113 AYIHEDECIGC--TKCIQACPVDAILGAAKLMHTVIASECTGCDLCVEPCPVDCIDMIEL 170 Query: 60 EPGLELW 66 L+ W Sbjct: 171 PTTLQNW 177 >gi|237735082|ref|ZP_04565563.1| 4Fe-4S ferredoxin [Mollicutes bacterium D7] gi|229381858|gb|EEO31949.1| 4Fe-4S ferredoxin [Coprobacillus sp. D7] Length = 367 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + CI C C+++C + ++ +I D+C+ CG C CP DAI + Sbjct: 193 DKCIGCGQ--CIKICAHNGTSITDHKASIDHDKCVGCGRCIGVCPKDAIVASMDEA 246 >gi|161612713|ref|YP_001586678.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362077|gb|ABX65845.1| hypothetical protein SPAB_00411 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAKGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 + C +C C CP + +N L I C CG C CP A ++ D EP L Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPAL 247 >gi|50120188|ref|YP_049355.1| electron transport protein HydN [Pectobacterium atrosepticum SCRI1043] gi|49610714|emb|CAG74159.1| electron transport protein [Pectobacterium atrosepticum SCRI1043] Length = 181 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C+ C VCP ++F+ + CI C C CP ++ + P ++ + Sbjct: 58 CRQCEDAPCANVCPNGAITREKDFIHVQQARCIGCKTCVVACPYGVMEVVSRPVMKKRI 116 >gi|308048358|ref|YP_003911924.1| respiratory nitrite reductase specific menaquinol--cytochrome-c reductase complex Fe-S cluster containing subunit NrfC [Ferrimonas balearica DSM 9799] gi|307630548|gb|ADN74850.1| respiratory nitrite reductase specific menaquinol--cytochrome-c reductase complex Fe-S cluster containing subunit NrfC [Ferrimonas balearica DSM 9799] Length = 219 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C+ C+ C+ VCP + EN + + P +C+ C C CP Sbjct: 89 SCVHCETAACIAVCPTGACFRDENGVVDVDPYKCVGCQYCIAACPY 134 >gi|242399275|ref|YP_002994699.1| Membrane-bound hydrogenase MBH 1, subunit Mbh1N (hydrogenase subunit) [Thermococcus sibiricus MM 739] gi|242265668|gb|ACS90350.1| Membrane-bound hydrogenase MBH 1, subunit Mbh1N (hydrogenase subunit) [Thermococcus sibiricus MM 739] Length = 189 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 ++ E C C T C CP + + I+P++CI CG+C C AI+ Sbjct: 134 IIAEKCKGC--TLCARNCPQNAIEGAPRVVHKINPEKCIGCGICATICKFSAIEE 186 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 + CI CK C+ VCP F + + C+ C C CPV+A++ Sbjct: 44 DKCIGCKL--CMNVCPAGVFEYVPEIKKVTLWLGRCVFCQQCVDVCPVNALE 93 >gi|257791333|ref|YP_003181939.1| thiamine pyrophosphate protein domain-containing protein TPP-binding [Eggerthella lenta DSM 2243] gi|257475230|gb|ACV55550.1| thiamine pyrophosphate protein domain protein TPP-binding [Eggerthella lenta DSM 2243] Length = 583 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ C C CP + I +CI CG C C +AI Sbjct: 520 AYAVTDACTACGVCS-TLGCPAIAKDPANDHALIDAAQCIGCGQCAQYCAWNAI 572 >gi|219852096|ref|YP_002466528.1| nitroreductase [Methanosphaerula palustris E1-9c] gi|219546355|gb|ACL16805.1| nitroreductase [Methanosphaerula palustris E1-9c] Length = 295 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V E C C C EVC G N I CI CG C CPV A Sbjct: 28 HVDNEKCTRCG--SCTEVC-RGVLGMGNNGPEIVSPSCIRCGQCVAVCPVGA 76 >gi|212711766|ref|ZP_03319894.1| hypothetical protein PROVALCAL_02841 [Providencia alcalifaciens DSM 30120] gi|212685288|gb|EEB44816.1| hypothetical protein PROVALCAL_02841 [Providencia alcalifaciens DSM 30120] Length = 200 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 112 IDEENCIGCTKCIQACPVDAI 132 >gi|212223876|ref|YP_002307112.1| putative ATPase RIL [Thermococcus onnurineus NA1] gi|212008833|gb|ACJ16215.1| Hypothetical ATPase [Thermococcus onnurineus NA1] Length = 591 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 66 Query: 56 K-----PDTEPGLELWLKINSEYATQWPNI 80 + E G +N+ + P + Sbjct: 67 TIINLPEELEEGCVHRYGVNAFVLYRLPVV 96 >gi|169351250|ref|ZP_02868188.1| hypothetical protein CLOSPI_02029 [Clostridium spiroforme DSM 1552] gi|169292312|gb|EDS74445.1| hypothetical protein CLOSPI_02029 [Clostridium spiroforme DSM 1552] Length = 599 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C C + CPV + G+ I ++CI CG C C + I+ Sbjct: 543 YVIDEEKCRKCGL--CAKQCPVGAIHGELGKVPYVIDQEKCIKCGQCIKACHFNVIE 597 Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CP E I ++C CG+C +CPV AI + Sbjct: 532 CPAGVCKE-LLQYVIDEEKCRKCGLCAKQCPVGAIHGEL 569 >gi|124382860|ref|YP_001025159.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] gi|126446057|ref|YP_001079510.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|126238911|gb|ABO02023.1| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10247] gi|261827011|gb|ABM99646.2| iron-sulfur cluster-binding protein [Burkholderia mallei NCTC 10229] Length = 265 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + EN L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREENGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|309388392|gb|ADO76272.1| Electron transfer flavoprotein alpha subunit [Halanaerobium praevalens DSM 2228] gi|309389792|gb|ADO77672.1| Electron transfer flavoprotein alpha subunit [Halanaerobium praevalens DSM 2228] Length = 418 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + C+ C CV CP D + + ++C CG+C +C DA++ D E E Sbjct: 7 DKCVGCGV--CVTSCPFDALKMENDIAVVDTEKCTMCGICVKKCNFDAMEIDKEETGEK 63 Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 L I D+C+ CGVC CP DA+K + + Sbjct: 1 MLNIFEDKCVGCGVCVTSCPFDALKMEND 29 >gi|297619557|ref|YP_003707662.1| NIL domain-containing protein [Methanococcus voltae A3] gi|297378534|gb|ADI36689.1| NIL domain protein [Methanococcus voltae A3] Length = 132 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E CI C C+ CPV E+F DECI C C CP AI Sbjct: 80 EKCIDCG--ACIVHCPVGAIKFEEDFSVAFDIDECIGCKTCAKICPTKAI 127 Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++CIDCG C CPV AIK + + Sbjct: 80 EKCIDCGACIVHCPVGAIKFEED 102 >gi|256827540|ref|YP_003151499.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256583683|gb|ACU94817.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 299 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAI-HPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +C+ C CV VCP Y + L I D+CI C C CP D + + Sbjct: 80 SCMHCTDAACVNVCPSGSLYHDPDGTGLVIYDVDKCIGCQYCRSACPFDVPRHTGIGVVG 139 Query: 65 LWLKIN 70 +KIN Sbjct: 140 GGIKIN 145 >gi|261345710|ref|ZP_05973354.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rustigianii DSM 4541] gi|282566197|gb|EFB71732.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rustigianii DSM 4541] Length = 223 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 +C C+H CV+VCP + + ++PD C+ C C CP Sbjct: 91 SCQHCEHAPCVDVCPTGASFIDKATGIVDVNPDLCVGCQYCIAACPY 137 >gi|218130960|ref|ZP_03459764.1| hypothetical protein BACEGG_02562 [Bacteroides eggerthii DSM 20697] gi|317476271|ref|ZP_07935521.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217986832|gb|EEC53164.1| hypothetical protein BACEGG_02562 [Bacteroides eggerthii DSM 20697] gi|316907545|gb|EFV29249.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 286 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 T CI C CV+VCP + N I P++C C CE CP I P + Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEVCPQGTIIALNFPPRKP 275 Query: 66 WLK 68 + Sbjct: 276 KTE 278 Score = 41.7 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVTACQFDAIHMNPETGLPEVDESKCTACGACAKACPRNIIE 189 >gi|39996541|ref|NP_952492.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|39983422|gb|AAR34815.1| ferredoxin family protein [Geobacter sulfurreducens PCA] gi|298505557|gb|ADI84280.1| ferredoxin family protein [Geobacter sulfurreducens KN400] Length = 94 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + E C+ C CVEVCP F EG + D+C++CG C CP AI+ D Sbjct: 15 FIGEKCVGCG--MCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNCPASAIRVD 68 >gi|317490471|ref|ZP_07948952.1| indolepyruvate ferredoxin oxidoreductase [Eggerthella sp. 1_3_56FAA] gi|325831351|ref|ZP_08164605.1| putative indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eggerthella sp. HGA1] gi|316910409|gb|EFV32037.1| indolepyruvate ferredoxin oxidoreductase [Eggerthella sp. 1_3_56FAA] gi|325486605|gb|EGC89053.1| putative indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eggerthella sp. HGA1] Length = 583 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y VT+ C C CP + I +CI CG C C +AI Sbjct: 520 AYAVTDACTACGVCS-TLGCPAIAKDPANDHALIDAAQCIGCGQCAQYCAWNAI 572 >gi|126729406|ref|ZP_01745220.1| benzoyl-CoA oxygenase, A subunit [Sagittula stellata E-37] gi|126710396|gb|EBA09448.1| benzoyl-CoA oxygenase, A subunit [Sagittula stellata E-37] Length = 395 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 9/70 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-------KPDT 59 E CI C C CP++ ++ + + PD+C C C P CP +I +P + Sbjct: 14 EICIRC--YTCEMTCPIEAITHNDDNVVVDPDKCNFCMDCIPVCPTGSIDEWRVVREPYS 71 Query: 60 EPGLELWLKI 69 W+++ Sbjct: 72 LDAQFGWVEL 81 Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP++AI + + Sbjct: 11 IDPEICIRCYTCEMTCPIEAITHNDD 36 >gi|126438164|ref|YP_001073855.1| formate dehydrogenase beta subunit [Mycobacterium sp. JLS] gi|126237964|gb|ABO01365.1| formate dehydrogenase beta subunit [Mycobacterium sp. JLS] Length = 300 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 121 SDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 172 >gi|58581545|ref|YP_200561.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426139|gb|AAW75176.1| ferredoxin II [Xanthomonas oryzae pv. oryzae KACC10331] Length = 156 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C+ CPVD G + I P C C +C P CPVD I+ Sbjct: 98 AWIVEADCIGC--TKCIHACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 151 >gi|130071|sp|P13629|PHFL_DESVO RecName: Full=Periplasmic [Fe] hydrogenase large subunit; AltName: Full=Fe hydrogenlyase gi|145099|gb|AAA23373.1| [Fe]-hydrogenase alpha subunit [Desulfovibrio vulgaris] Length = 421 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKP 57 CI C C + CP + G+ H + CI+CG C CPV AI Sbjct: 35 CIGCD--SCQQYCPTGAIFGDTGDAHKIPHEELCINCGQCLTHCPVGAIYE 83 Score = 40.5 bits (94), Expect = 0.079, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 15/28 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDT 59 F+ I +CI C C+ CP AI DT Sbjct: 27 FIQIDESKCIGCDSCQQYCPTGAIFGDT 54 >gi|303245127|ref|ZP_07331443.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302484510|gb|EFL47458.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 386 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VV +NC+ C CV CPV+ +N I +CI C +C CP +AI Sbjct: 127 VVMDNCVGCGV--CVPECPVEAITIEDNKAVIDKTKCIYCSICGQTCPWNAI 176 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDE-------CIDCGVCEPECPVDAIK 56 C+LC CV+VCP++ E PDE C+ CGVC PECPV+AI Sbjct: 91 CVLC--QKCVDVCPIEIISIPGLVEKPKKQITIPDEPIVVMDNCVGCGVCVPECPVEAIT 148 Query: 57 PDTE 60 + Sbjct: 149 IEDN 152 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C LC CVEVCP E + + +P +C+ CG C CP Sbjct: 34 CTLCMQ--CVEVCPTGALSEIDGKIDYNPVKCMKCGKCAEACPT 75 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C C E+CP + + N + + P C CG+C CPV+A+ D + Sbjct: 199 ACIGC--FKCAEICPGNMIKVDKNNLIVMPPKACPACGLCVNVCPVNALTLDVK 250 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 10/63 (15%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI+C C CP G N + +P C CG C CP+ ++ D Sbjct: 296 CIVCG--ACTVACPTGALKMGTINHNGKDYNRIEFNPSLCDKCGKCVEVCPMKVLEIDEN 353 Query: 61 PGL 63 Sbjct: 354 DEH 356 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C EVCP E + CI CG C CP A+K Sbjct: 273 KECAEVCPTRAIKVDEKSKTV--KMCIVCGACTVACPTGALK 312 >gi|269217312|ref|ZP_06161166.1| iron-sulfur cluster-binding protein [Slackia exigua ATCC 700122] gi|269129449|gb|EEZ60534.1| iron-sulfur cluster-binding protein [Slackia exigua ATCC 700122] Length = 259 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 E+C CK C+ CPV Y + D CI CG+C CP + + D Sbjct: 155 EHCKQCKEAACMRNCPVHAIYADPKTGARVVDTDACIGCGLCHEACPWNMPQID 208 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 14/61 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCGVCEPECPVDAIKPD 58 V T+ CI C C E CP N I P +CI CG C +CP AIK Sbjct: 185 VDTDACIGCGL--CHEACPW-------NMPQIDPASGKSTKCIACGRCAVQCPNGAIKFV 235 Query: 59 T 59 Sbjct: 236 D 236 >gi|253582041|ref|ZP_04859265.1| dihydroorotate dehydrogenase [Fusobacterium varium ATCC 27725] gi|251836390|gb|EES64927.1| dihydroorotate dehydrogenase [Fusobacterium varium ATCC 27725] Length = 365 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V TE CI C C VC E I+ ++C CGVC +CP A Sbjct: 312 VTTEKCIGC--RVCKTVCGYKAIEIIEKKAVINKEKCFGCGVCVSKCPTKA 360 >gi|237802343|ref|ZP_04590804.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. oryzae str. 1_6] gi|257482983|ref|ZP_05637024.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624663|ref|ZP_06457617.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648503|ref|ZP_06479846.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. aesculi str. 2250] gi|298485253|ref|ZP_07003346.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160241|gb|EFI01269.1| Ferredoxin [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330871125|gb|EGH05834.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330874686|gb|EGH08835.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330891346|gb|EGH24007.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. mori str. 301020] gi|330965063|gb|EGH65323.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. actinidiae str. M302091] gi|330985917|gb|EGH84020.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011777|gb|EGH91833.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331025200|gb|EGI05256.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. oryzae str. 1_6] Length = 83 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I+P+ C +C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVINPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEP 61 I D Sbjct: 59 IPLDENH 65 >gi|218779665|ref|YP_002430983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761049|gb|ACL03515.1| Periplasmic 4Fe-4S Ferredoxin protein with transmembrane domain [Desulfatibacillum alkenivorans AK-01] Length = 312 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C+ CV C V + EN I +CI C C CP + + Sbjct: 115 CMHCQDPACVSACIVGALTKQENGAVIYDKSKCIGCRYCMVACPFGIPAYEYDQPF 170 >gi|213421582|ref|ZP_03354648.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 29 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 75 >gi|114051372|ref|NP_001040316.1| NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] gi|87248369|gb|ABD36237.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Bombyx mori] Length = 221 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 120 ERCIACKL--CEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 176 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 120 ERCIACKLCEAICPAQAITIEAEE 143 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 161 CIYCGF--CQEACPVDAIVEGPNF 182 >gi|62182754|ref|YP_219171.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130387|gb|AAX68090.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717255|gb|EFZ08826.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 208 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ++ C C CV CP ++ + + + C+ C CE CP A + DT Sbjct: 59 TYYLSIACNHCDEPVCVSGCPTGAMHKRKEDGLVVVDDSVCVGCRYCEMRCPYGAPQFDT 118 Query: 60 EPG 62 + Sbjct: 119 QAN 121 >gi|78355312|ref|YP_386761.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217717|gb|ABB37066.1| iron-sulfur cluster-binding protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 427 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 13/65 (20%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-----------NFLAIHPDECIDCGVCEPE 49 M + E C C C CP+D + + C+ CG C + Sbjct: 284 MAQIQEERCTGCG--KCAAACPIDAITMVPAAQTTPDTRRRRSVQVDTSLCLGCGACALK 341 Query: 50 CPVDA 54 CP A Sbjct: 342 CPTGA 346 Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I + C CG C CP+DAI Sbjct: 284 MAQIQEERCTGCGKCAAACPIDAI 307 >gi|312622471|ref|YP_004024084.1| Fe-S cluster domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202938|gb|ADQ46265.1| Fe-S cluster domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 443 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 EKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 >gi|303326306|ref|ZP_07356749.1| heterodisulfide reductase, A subunit [Desulfovibrio sp. 3_1_syn3] gi|302864222|gb|EFL87153.1| heterodisulfide reductase, A subunit [Desulfovibrio sp. 3_1_syn3] Length = 653 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C+ CP E GE + C CG+C CP AI+ + Sbjct: 585 CVDCG--KCIRCCPFGAIKEVEIRGEQKAQVIETVCQGCGLCTATCPQGAIQLSHATDNQ 642 Query: 65 LWLKINS 71 + ++N+ Sbjct: 643 ILAEVNA 649 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYE---------------GENFLAIHPDECID 42 YV C C C E CP D F E I+ C Sbjct: 235 AYVDWSKCTGCG--ACTEKCPSKKTPDAFNEFTGPTTAITIAFPQAIPKKAVINAAHCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AI+ D + Sbjct: 293 FVKGKCGVCAKVCPTGAIQYDMQDE 317 >gi|170290376|ref|YP_001737192.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174456|gb|ACB07509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 191 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVD 53 V C+ C CV+ CP + + I P +CI C C CP Sbjct: 61 VPMRCMHCDPAPCVKACPTGSMHRTDEGFVISDPSKCIGCRTCLLACPFG 110 >gi|187251479|ref|YP_001875961.1| putative Indolepyruvate ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] gi|186971639|gb|ACC98624.1| Putative indolepyruvate ferredoxin oxidoreductase [Elusimicrobium minutum Pei191] Length = 56 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + CI C C CPV E + I P CIDCG C CPV I Sbjct: 1 MAHKIDGAVCINCG--ACEGTCPVSAISEQDGKRVIDPAVCIDCGACVSSCPVSCI 54 >gi|148653804|ref|YP_001280897.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Psychrobacter sp. PRwf-1] gi|148572888|gb|ABQ94947.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Psychrobacter sp. PRwf-1] Length = 83 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C VCP D YEGE I+PD C +C C CP+D Sbjct: 1 MALMITDECINCDV--CEPVCPNDAIYEGEEIYEINPDLCTECVGHFDEPQCVEICPIDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPND 62 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEP CP DAI E Sbjct: 7 DECINCDVCEPVCPNDAIYEGEE 29 >gi|169769016|ref|XP_001818978.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40] gi|83766836|dbj|BAE56976.1| unnamed protein product [Aspergillus oryzae] Length = 226 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 182 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 183 ETA----------NAEYATETREELLYNKEKLLANGDKWE 212 >gi|307825404|ref|ZP_07655623.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacter tundripaludum SV96] gi|307733579|gb|EFO04437.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacter tundripaludum SV96] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +++ E+CI C C+ CPVD + + EC C +C CPVD I Sbjct: 82 AFIIEEDCIGC--VKCIADCPVDAIVGAAKLMHTVIASECTGCELCIAPCPVDCIIMQAA 139 Query: 61 PG 62 P Sbjct: 140 PP 141 >gi|308047958|ref|YP_003911524.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307630148|gb|ADN74450.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 225 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + C C CV+ CP + E + + + CI C C CP DA + D Sbjct: 78 AYYASLGCNHCSEPVCVKTCPTGAMHKREQDGLVLVDESLCIGCQSCAQACPYDAPQID 136 >gi|284049221|ref|YP_003399560.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] gi|283953442|gb|ADB48245.1| hydrogenase large subunit domain protein [Acidaminococcus fermentans DSM 20731] Length = 418 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C K DCV+VC D + + + I PD+C+ C C C ++++K Sbjct: 59 CSEDKQADCVKVCQWDAMHPSADGVQIDPDKCVGCQACVDACKLESLK 106 >gi|227832792|ref|YP_002834499.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] gi|262182719|ref|ZP_06042140.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] gi|227453808|gb|ACP32561.1| formate dehydrogenase, iron-sulfur subunit [Corynebacterium aurimucosum ATCC 700975] Length = 347 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C + C++VCP + E + + D C CG C CP I+ + G Sbjct: 117 SDVCKHCTNAGCLDVCPTGALFRSEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGG 174 >gi|238501446|ref|XP_002381957.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus flavus NRRL3357] gi|220692194|gb|EED48541.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Aspergillus flavus NRRL3357] Length = 226 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 182 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 183 ETA----------NAEYATETREELLYNKEKLLANGDKWE 212 >gi|222529283|ref|YP_002573165.1| fe-S cluster domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456130|gb|ACM60392.1| Fe-S cluster domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 443 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 EKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 >gi|150402527|ref|YP_001329821.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033557|gb|ABR65670.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 132 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV CPV F + + +ECI C C CPV+AIK Sbjct: 80 EKCIDCG--ACVVHCPVGALSVDNEFKILLDEEECIGCKNCAKICPVNAIK 128 Score = 40.9 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 16/31 (51%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ++CIDCG C CPV A+ D E Sbjct: 72 PKMIQKDDEKCIDCGACVVHCPVGALSVDNE 102 >gi|15611332|ref|NP_222983.1| ferredoxin [Helicobacter pylori J99] gi|4154783|gb|AAD05841.1| Ferredoxin [Helicobacter pylori J99] gi|307636971|gb|ADN79421.1| 4Fe-4S ferredoxin [Helicobacter pylori 908] gi|317013722|gb|ADU81158.1| ferredoxin [Helicobacter pylori Gambia94/24] gi|325995562|gb|ADZ50967.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Helicobacter pylori 2018] gi|325997158|gb|ADZ49366.1| 4Fe-4S ferredoxin/ iron-sulfur binding protein [Helicobacter pylori 2017] Length = 84 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 9/65 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ +I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYSIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD 58 AI PD Sbjct: 59 AILPD 63 Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|303256134|ref|ZP_07342151.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302861104|gb|EFL84178.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 192 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C CV+ CP Y EN L P++C+ C C CP DA Sbjct: 67 CQHCSDAPCVKTCPFGANYYDENGLVRNDPNKCVGCNYCVASCPYDA 113 >gi|212211971|ref|YP_002302907.1| electron transport complex protein [Coxiella burnetii CbuG_Q212] gi|212010381|gb|ACJ17762.1| electron transport complex protein [Coxiella burnetii CbuG_Q212] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V + CI C T C++ CP D + + D C C +C P CPVD I Sbjct: 81 AFVREDECIGC--TKCIQACPTDAIIGASKLMHTVITDACTGCELCLPPCPVDCIDMKII 138 Query: 61 PGLELWLKINSEYATQWPNITTKK 84 L K + A QW + KK Sbjct: 139 APLTPHEK--KQKAQQWRSRYEKK 160 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C+ C+ CPVDC Sbjct: 110 MHTVITDACTGCEL--CLPPCPVDCI 133 >gi|212224064|ref|YP_002307300.1| ATPase, N-terminus [Thermococcus onnurineus NA1] gi|212009021|gb|ACJ16403.1| ATPase, N-terminus [Thermococcus onnurineus NA1] Length = 295 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 ++ TE+CI C C E CP DC + + C C VC CPV Sbjct: 64 AHINTESCIRCG--ICQERCPYDCIKVIDGDYVVSELTCEGCNVCSLVCPV 112 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G I+ + CI CG+C+ CP D IK Sbjct: 60 GAKVAHINTESCIRCGICQERCPYDCIK 87 >gi|189346683|ref|YP_001943212.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] gi|189340830|gb|ACD90233.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium limicola DSM 245] Length = 62 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +TE C C C CPV +G++ I CIDC C CPVD Sbjct: 1 MAHRITEECTYCG--ACEPECPVAAITQGDDIYIIDESVCIDCIGYHDEAACVAVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|150402896|ref|YP_001330190.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033926|gb|ABR66039.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 658 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 23/86 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C CP++ E G I D CIDCG Sbjct: 240 YVDEDTCTGCG--ACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKDHCIDCG 297 Query: 45 VCEPECPVDAIKPDTEPGLELWLKIN 70 +C C +A++ D +P LKIN Sbjct: 298 LCAKVCCAEAVRYDQKPQE---LKIN 320 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPD--ECIDCGVCEPECPVDA 54 V E C CK C +CP + E + L D C CG C CP A Sbjct: 577 ATVNEEVCGGCKV--CALMCPYNAITYEEKDGHLVAISDDVACKGCGACAAACPSGA 631 >gi|149926432|ref|ZP_01914693.1| putative iron-sulfur binding protein [Limnobacter sp. MED105] gi|149824795|gb|EDM84009.1| putative iron-sulfur binding protein [Limnobacter sp. MED105] Length = 704 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C++ C + ++P C+ CG C CP AI+ P Sbjct: 330 SCIDACSTKAIKSAGEKIEVNPHLCLGCGACTTVCPTGAIQFALSPA 376 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 V + C LC C CP + L C+ CG+C CP +A Sbjct: 569 VNKDKCTLC--MSCTSACPASALIDNPEMPQLRFIERNCVQCGLCVETCPENA 619 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 4/44 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 E C C CV+ CP + L I + C G C C Sbjct: 202 EMCTRCG--ACVDACPTQSIS--KESLTIDLNSCDQSGACIKAC 241 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 17/36 (47%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 ++ D+C C C CP A+ + E +++ N Sbjct: 569 VNKDKCTLCMSCTSACPASALIDNPEMPQLRFIERN 604 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 12/25 (48%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 + + C CG C CP +I ++ Sbjct: 199 VDMEMCTRCGACVDACPTQSISKES 223 >gi|149191081|ref|ZP_01869341.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio shilonii AK1] gi|148835109|gb|EDL52086.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio shilonii AK1] Length = 228 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 ++C C++ CV VCP Y+ E I H ++C+ CG C CP Sbjct: 97 DSCQHCENPPCVYVCPTGAAYKDEETGIIDVHNEKCVGCGYCLAACPYQ 145 >gi|149191926|ref|ZP_01870158.1| iron-sulfur cluster-binding protein [Vibrio shilonii AK1] gi|148834231|gb|EDL51236.1| iron-sulfur cluster-binding protein [Vibrio shilonii AK1] Length = 553 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDA 54 T+ C LC CV VCP + + A+ +CI CG+CE CP A Sbjct: 417 TDKCTLC--MACVAVCPTKALHNDGDRPALDFIEQDCIQCGMCEKACPESA 465 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENFL----AIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGNDKIGHKIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 T + +++ Sbjct: 233 HYALPTPQETQKFIE 247 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 14/31 (45%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 D+C C C CP A+ D + +++ Sbjct: 418 DKCTLCMACVAVCPTKALHNDGDRPALDFIE 448 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F ++ D C C C CP A+ + + ++IN Sbjct: 166 PKFFRLNTDLCAHSSRGVKGCERCVDACPAGALSSEGNDKIGHKIEIN 213 >gi|332980968|ref|YP_004462409.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mahella australiensis 50-1 BON] gi|332698646|gb|AEE95587.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Mahella australiensis 50-1 BON] Length = 56 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M Y +T++CI C C C G++ + P C +CG C CPVDA Sbjct: 1 MPYRITDDCISCG--ACEPDCEGGAISAGDDIYVVDPALCTECGNCADVCPVDA 52 >gi|293603975|ref|ZP_06686388.1| NADH:ubiquinone oxidoreductase subunit RnfB [Achromobacter piechaudii ATCC 43553] gi|292817579|gb|EFF76647.1| NADH:ubiquinone oxidoreductase subunit RnfB [Achromobacter piechaudii ATCC 43553] Length = 214 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C++ CPVD + + D C C +C CPVD I+ P W Sbjct: 86 CIGC--TLCIQACPVDAIVGANKHMHTVLADWCTGCDLCVAPCPVDCIQ--MVPAGRSWT 141 Query: 68 KINSEYATQ 76 + ++ + Q Sbjct: 142 EQDAAISRQ 150 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 81 IDESHCIGCTLCIQACPVDAI 101 >gi|294637678|ref|ZP_06715956.1| cytochrome c nitrite reductase, Fe-S protein [Edwardsiella tarda ATCC 23685] gi|291089154|gb|EFE21715.1| cytochrome c nitrite reductase, Fe-S protein [Edwardsiella tarda ATCC 23685] Length = 223 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CVEVCP F + + + + PD C+ C C CP Sbjct: 91 SCQHCDSPPCVEVCPTGASFRDATSGIVDVDPDLCVGCQYCIAACPY 137 >gi|159905698|ref|YP_001549360.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887191|gb|ABX02128.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 132 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV CPV + E + + +ECI C C CPV+AIK Sbjct: 80 EKCIDCG--ACVVHCPVGALSVDSEFKILLDEEECIGCKNCAKICPVNAIK 128 Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ++CIDCG C CPV A+ D+E Sbjct: 72 PKMIQKDDEKCIDCGACVVHCPVGALSVDSE 102 >gi|187919644|ref|YP_001888675.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718082|gb|ACD19305.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] Length = 251 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYCAWACPYGARELDE 125 >gi|66047114|ref|YP_236955.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae B728a] gi|63257821|gb|AAY38917.1| Electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. syringae B728a] Length = 291 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD I +EC C +C CPVD I+ Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGAAKLMHTVII-NECTGCDLCIAPCPVDCIE 137 >gi|115445575|ref|NP_001046567.1| Os02g0282900 [Oryza sativa Japonica Group] gi|47848571|dbj|BAD22422.1| putative 68 kDa protein HP68 [Oryza sativa Japonica Group] gi|113536098|dbj|BAF08481.1| Os02g0282900 [Oryza sativa Japonica Group] gi|125581670|gb|EAZ22601.1| hypothetical protein OsJ_06269 [Oryza sativa Japonica Group] gi|215768320|dbj|BAH00549.1| unnamed protein product [Oryza sativa Japonica Group] Length = 608 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%) Query: 4 VVTEN-CI--LCKHTDCVEVCPVD-----CFYEGENFLA--IHPDECIDCGVCEPECPVD 53 VVTE+ C C C + CPV+ C + I + CI CG+C CP D Sbjct: 14 VVTEDRCRPSKCGQQ-CRKRCPVNATGRQCIEVTPSSRVSLISEELCIGCGICVKVCPFD 72 Query: 54 AIK 56 AI+ Sbjct: 73 AIQ 75 >gi|46126979|ref|XP_388043.1| NUIM_NEUCR NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor (Complex I-23KD) (CI-23KD) [Gibberella zeae PH-1] Length = 213 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGEN---------FLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 112 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTKYDIDMTKCIYCGFCQESCPVDAIV 169 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 170 ESP----------NAEYATE 179 >gi|323456536|gb|EGB12403.1| hypothetical protein AURANDRAFT_52238 [Aureococcus anophagefferens] Length = 214 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 113 ERCIACKL--CEAVCPAQAITIEAEARADGSRKTTRYDIDMTKCIYCGYCQEACPVDAI 169 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 113 ERCIACKLCEAVCPAQAITIEAEARAD 139 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C + C E CPVD EG N+ Sbjct: 154 CIYCGY--CQEACPVDAIVEGPNY 175 >gi|322806473|emb|CBZ04042.1| mind superfamily P-loop ATPase containing an inserted ferredoxin domain [Clostridium botulinum H04402 065] Length = 281 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T+C VC D I P C CG C CP +AIK + E + + Sbjct: 65 DICIKC--TECELVCKFDAI----ENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 37.1 bits (85), Expect = 0.94, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G +I D CI C CE C DAI+ Sbjct: 56 GGKKASIDEDICIKCTECELVCKFDAIE 83 >gi|242064838|ref|XP_002453708.1| hypothetical protein SORBIDRAFT_04g011050 [Sorghum bicolor] gi|241933539|gb|EES06684.1| hypothetical protein SORBIDRAFT_04g011050 [Sorghum bicolor] Length = 597 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 2 TYVVTENCI--LCKHTDCVEVCPVD-----CFYEGENFLA--IHPDECIDCGVCEPECPV 52 VV + C C +C CPV+ C ++ I D C+ CG+C CP Sbjct: 9 AVVVEDRCRPSKCG-QECRRRCPVNATGRQCIEVTQSSKVSLISEDLCVGCGICVKVCPF 67 Query: 53 DAIK 56 +AI+ Sbjct: 68 NAIQ 71 >gi|257791615|ref|YP_003182221.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257475512|gb|ACV55832.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 + C C++ C++VCPV Y+ + + IH D+CI C +C CP +A Sbjct: 61 IPVACQHCENPACLKVCPVGATYKDDMGRVEIHYDKCIGCRICMAACPYNA 111 >gi|268589748|ref|ZP_06123969.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291314901|gb|EFE55354.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 204 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +Y ++ +C C + CV CP ++ E + L + C+ C CE CP A + D + Sbjct: 59 SYYLSISCNHCSNPTCVAGCPTGAMHKREQDGLVVDQTICVGCRYCELRCPYGAPQYDEK 118 Query: 61 PGL 63 L Sbjct: 119 KKL 121 >gi|157377115|ref|YP_001475715.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319489|gb|ABV38587.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 238 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 C C+ CV VCP + E + + + CI C C CP Sbjct: 95 CNNCETPSCVSVCPTGATFKREEDGIVVVDSTLCIGCNYCIQACPYG 141 >gi|145591762|ref|YP_001153764.1| putative ATPase RIL [Pyrobaculum arsenaticum DSM 13514] gi|145283530|gb|ABP51112.1| ABC transporter related [Pyrobaculum arsenaticum DSM 13514] Length = 590 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Query: 2 TYVVTENCI--LCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVD 53 V ++C C H +CV+ CPV+ E I CI CG+C +CP + Sbjct: 5 AVVDVDSCQPKKCGH-ECVKYCPVNKTGKVVWIDEQTKKAVISEALCIGCGICVHKCPFE 63 Query: 54 AIKPDTEPGL 63 AI P Sbjct: 64 AITIVNLPDE 73 >gi|27380020|ref|NP_771549.1| NADH dehydrogenase subunit I [Bradyrhizobium japonicum USDA 110] gi|81736780|sp|Q89KJ6|NUOI_BRAJA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|27353174|dbj|BAC50174.1| NADH ubiquinone oxidoreductase chain I [Bradyrhizobium japonicum USDA 110] Length = 168 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 66 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 123 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 47 PISPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIEAGP 89 Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 108 CIYCGL--CQEACPVDAIVEGPNF 129 >gi|330999804|ref|ZP_08323509.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] gi|329573807|gb|EGG55396.1| 4Fe-4S binding domain protein [Parasutterella excrementihominis YIT 11859] Length = 183 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C+ C + C+ VCP F + + + + ++C CG+C+ CP DAI Sbjct: 61 ACMHCSNPTCLAVCPAAAFTKRPDGIVVLDRNKCTSCGLCKEACPYDAI 109 >gi|238028672|ref|YP_002912903.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Burkholderia glumae BGR1] gi|237877866|gb|ACR30199.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia glumae BGR1] Length = 89 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G + I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPDIYVIDPGKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHAETH 69 >gi|222444427|ref|ZP_03606942.1| hypothetical protein METSMIALI_00038 [Methanobrevibacter smithii DSM 2375] gi|261351023|ref|ZP_05976440.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] gi|222433992|gb|EEE41157.1| hypothetical protein METSMIALI_00038 [Methanobrevibacter smithii DSM 2375] gi|288860363|gb|EFC92661.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] Length = 456 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 7/57 (12%) Query: 6 TENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T+ C C CV+ C GE + I+PD C+ CG C CP DAIK Sbjct: 95 TKLCKSCG--ACVQACKTGSIKIHAVDTGEAYSVINPDTCVRCGYCFRVCPTDAIKY 149 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C+E CP++ Y N C C +C CP DAI D + Sbjct: 29 CANCTDKPCLESCPIEAIYVDPNDGFTKIKSTCFGCVLCRNACPYDAIHMDVD 81 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +E C C CV+ CP D + + + + CI C CE CPV AIK Sbjct: 403 SEKCQSCG--ICVKNCPTDALILEGDKVTFNEENCIYCRQCEAICPVTAIK 451 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C +C+ CP + + I ++C+ CG C +C AI+ + Sbjct: 325 CIACG--ECLNSCPTGAISLDAPKPIVIDENKCVYCGRCVGDCQFGAIRAYDD 375 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY---------EGENFLAIHPDECIDCGVCEPECP-VDAI 55 + C+ C + C VCP D +G + ++ D CI C C CP AI Sbjct: 130 DTCVRCGY--CFRVCPTDAIKYGQLLPKTVKGGKVIIVNQDVCIGCMTCTRVCPAAGAI 186 Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 10/74 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C C CP D + EN I+ C CG C C +IK Sbjct: 57 IKSTCFGC--VLCRNACPYDAIHMDVDIAEPIKENVPNINTKLCKSCGACVQACKTGSIK 114 Query: 57 PDTEPGLELWLKIN 70 E + IN Sbjct: 115 IHAVDTGEAYSVIN 128 Score = 40.1 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPV-DCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 V + CI C C VCP + I+P C C C CP AIK + Sbjct: 165 VNQDVCIGC--MTCTRVCPAAGAINVSKTNKLPYINPGYCARCEECMHSCPSTAIKYSSR 222 Query: 60 EPGLELWLKI 69 + +L+ +I Sbjct: 223 KKAFKLYSEI 232 >gi|209735168|gb|ACI68453.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 109 ERCIACKLCEAVCPAQAITIEAE 131 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|168179907|ref|ZP_02614571.1| iron-sulfur binding protein [Clostridium botulinum NCTC 2916] gi|226949492|ref|YP_002804583.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum A2 str. Kyoto] gi|182669235|gb|EDT81211.1| iron-sulfur binding protein [Clostridium botulinum NCTC 2916] gi|226844018|gb|ACO86684.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum A2 str. Kyoto] Length = 281 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T+C VC D I P C CG C CP +AIK + E + + Sbjct: 65 DICIKC--TECELVCKFDAI----ENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G +I D CI C CE C DAI+ Sbjct: 56 GGKKASIDEDICIKCTECELVCKFDAIE 83 >gi|56552709|ref|YP_163548.1| RnfABCDGE type eelectron transport complex subunit B [Zymomonas mobilis subsp. mobilis ZM4] gi|241762603|ref|ZP_04760676.1| electron transport complex, RnfABCDGE type, B subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753651|ref|YP_003226544.1| electron transport complex, RnfABCDGE type subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544283|gb|AAV90437.1| electron transport complex, RnfABCDGE type, B subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|241372798|gb|EER62502.1| electron transport complex, RnfABCDGE type, B subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553014|gb|ACV75960.1| electron transport complex, RnfABCDGE type, B subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 220 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + CI C T C+ C D + I PD C C CE CP AI+ Sbjct: 108 DLCIGC--TACIRDCSSDAIIGAARQVHTIIPDVCHGCSKCETACPTGAIE 156 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 13/27 (48%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G IH D CI C C +C DAI Sbjct: 99 GPKTALIHEDLCIGCTACIRDCSSDAI 125 >gi|15896720|ref|NP_350069.1| nitroreductase family protein [Clostridium acetobutylicum ATCC 824] gi|15026573|gb|AAK81409.1|AE007845_10 Nitroreductase family protein fused to ferredoxin domain [Clostridium acetobutylicum ATCC 824] gi|325510888|gb|ADZ22524.1| Nitroreductase family protein fused to ferredoxin domain [Clostridium acetobutylicum EA 2018] Length = 269 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + C+ C CV CP EN + P +CI CG C CP +AI Sbjct: 9 DKCVKCG--ICVNECPEQIIKMKENSPEDVCPQKCIACGHCVAVCPKEAI 56 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIK 56 N + ++ D+C+ CG+C ECP IK Sbjct: 2 NLITVNHDKCVKCGICVNECPEQIIK 27 >gi|116178838|ref|XP_001219268.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Chaetomium globosum CBS 148.51] gi|88184344|gb|EAQ91812.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Chaetomium globosum CBS 148.51] Length = 223 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAVCPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 179 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 180 ESP----------NAEYATE 189 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 103 PISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERAD 148 >gi|284434569|gb|ADB85312.1| putative NADH-ubiquinone [Phyllostachys edulis] Length = 221 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 120 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 176 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 120 ERCIACKLCEAICPAQAITIEAEERED 146 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 161 CIYCGF--CQEACPVDAIVEGPNF 182 >gi|262373368|ref|ZP_06066647.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter junii SH205] gi|262313393|gb|EEY94478.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter junii SH205] Length = 180 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 MTPDFELAEYV 126 >gi|237735737|ref|ZP_04566218.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229381482|gb|EEO31573.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 203 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+++ CI C C CP C G I D C+ CG+C CPV AI+ Sbjct: 150 YLISNRCIACD--RCKRECPQQCIKSGS-KYKIMQDHCLHCGLCYENCPVRAIE 200 >gi|212528252|ref|XP_002144283.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Penicillium marneffei ATCC 18224] gi|210073681|gb|EEA27768.1| NADH-quinone oxidoreductase, 23 kDa subunit, putative [Penicillium marneffei ATCC 18224] Length = 225 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 181 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 182 ESP----------NAEYATETREELLYNKEKLLANGDKWE 211 >gi|148642370|ref|YP_001272883.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] gi|148551387|gb|ABQ86515.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] Length = 453 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 7/57 (12%) Query: 6 TENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T+ C C CV+ C GE + I+PD C+ CG C CP DAIK Sbjct: 92 TKLCKSCG--ACVQACKTGSIKIHAVDTGEAYSVINPDTCVRCGYCFRVCPTDAIKY 146 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C+E CP++ Y N C C +C CP DAI D + Sbjct: 26 CANCTDKPCLESCPIEAIYVDPNDGFTKIKSTCFGCVLCRNACPYDAIHMDVD 78 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +E C C CV+ CP D + + + + CI C CE CPV AIK Sbjct: 400 SEKCQSCG--ICVKNCPTDALILEGDKVTFNEENCIYCRQCEAICPVTAIK 448 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C +C+ CP + + I ++C+ CG C +C AI+ + Sbjct: 322 CIACG--ECLNSCPTGAISLDAPKPIVIDENKCVYCGRCVGDCQFGAIRAYDD 372 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY---------EGENFLAIHPDECIDCGVCEPECP-VDAI 55 + C+ C + C VCP D +G + ++ D CI C C CP AI Sbjct: 127 DTCVRCGY--CFRVCPTDAIKYGQLLPKTVKGGKVIIVNQDVCIGCMTCTRVCPAAGAI 183 Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 10/74 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C C CP D + EN I+ C CG C C +IK Sbjct: 54 IKSTCFGC--VLCRNACPYDAIHMDVDIAEPIKENVPNINTKLCKSCGACVQACKTGSIK 111 Query: 57 PDTEPGLELWLKIN 70 E + IN Sbjct: 112 IHAVDTGEAYSVIN 125 Score = 40.1 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 6/70 (8%) Query: 4 VVTENCILCKHTDCVEVCPV-DCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT- 59 V + CI C C VCP + I+P C C C CP AIK + Sbjct: 162 VNQDVCIGC--MTCTRVCPAAGAINVSKTNKLPYINPGYCARCEECMHSCPSTAIKYSSR 219 Query: 60 EPGLELWLKI 69 + +L+ +I Sbjct: 220 KKAFKLYSEI 229 >gi|323699800|ref|ZP_08111712.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323459732|gb|EGB15597.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 370 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +NC C+ C+ C E +A++P++C+ CG C C ++ + G++ Sbjct: 193 DNCQACE--ACLRACKTGALYIDETTGKIALNPEKCVGCGGCFVACRHGGLQVNWAVGVQ 250 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 +L+ EYA T K SL MD V Sbjct: 251 DFLERMMEYAKGV-LATKTKPSLHVNFVMDVVPD 283 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 3/38 (7%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+PD C C C C A+ D G + +N E Sbjct: 190 INPDNCQACEACLRACKTGALYIDETTGK---IALNPE 224 >gi|317487064|ref|ZP_07945872.1| pyridine nucleotide-disulfide oxidoreductase [Bilophila wadsworthia 3_1_6] gi|316921746|gb|EFV43024.1| pyridine nucleotide-disulfide oxidoreductase [Bilophila wadsworthia 3_1_6] Length = 767 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 9/54 (16%) Query: 7 ENCILCKHTD----CVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECP 51 + C+ C C+E CP G PD CI CG+C CP Sbjct: 701 DRCVSCGTCRDCRMCLESCPEGAISRETLAGGAYRYVSDPDRCIGCGICSGVCP 754 >gi|302889235|ref|XP_003043503.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256724420|gb|EEU37790.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 211 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGEN---------FLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 110 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTKYDIDMTKCIYCGFCQESCPVDAIV 167 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 168 ESP----------NAEYATE 177 >gi|257790218|ref|YP_003180824.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317489680|ref|ZP_07948184.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325830334|ref|ZP_08163791.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474115|gb|ACV54435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316911274|gb|EFV32879.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325487801|gb|EGC90239.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 178 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +V C+ C+ C VCP Y ++ + + ++CI C C CP A Sbjct: 53 IVPTQCMHCEDAPCAAVCPTHATYITDSGVVLVDEEKCIGCKYCMAACPYGA 104 >gi|161502318|ref|YP_001569430.1| putative polyferredoxin [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863665|gb|ABX20288.1| hypothetical protein SARI_00350 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + +I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFLLTQGQASIDMARCIACGDCLFVCPVDAI 67 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 E C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 EACRMCG--ACWRSCPENVIQFADDTLTITAARCTGCGGCAAVCPHQALRLRFDMEPAQT 248 Query: 65 LWLK 68 + Sbjct: 249 RHIA 252 >gi|150401595|ref|YP_001325361.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014298|gb|ABR56749.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 151 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 28/50 (56%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C++ C +CPVD Y + + + CI CG+CE CPV +I D Sbjct: 42 CMQCENAPCYNICPVDAIYLKDGIPLVKKERCIGCGMCEIVCPVGSIFID 91 >gi|121534160|ref|ZP_01665985.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307263|gb|EAX48180.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 272 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C CV+VCP ++ + + + ++CI CG C CP + Sbjct: 75 CFHCGEAACVKVCPSGALFKTKTGIVAVDREKCIACGYCHNACPFN 120 >gi|85857933|ref|YP_460135.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] gi|85721024|gb|ABC75967.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] Length = 637 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C C + CPV+ E + I +CI CGVC C DAI Sbjct: 587 EKCTGC--MACAKKCPVEAISGERKKAHEIDQAKCIKCGVCMETCKFDAI 634 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP + I ++C C C +CPV+AI + + E Sbjct: 571 CPAG-VCKALIQYNIDKEKCTGCMACAKKCPVEAISGERKKAHE 613 >gi|70607818|ref|YP_256688.1| 4Fe-4S binding domain-containing protein [Sulfolobus acidocaldarius DSM 639] gi|68568466|gb|AAY81395.1| conserved 4Fe-4S binding domain protein [Sulfolobus acidocaldarius DSM 639] Length = 277 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + CV VCPV F E+ + + ++CI C C CP Sbjct: 95 YNIPINCFHCMNAPCVPVCPVGATFKRVEDGIVLVDYNKCIGCKYCIYGCPYG 147 >gi|121613356|ref|YP_001001226.1| dimethylsulfoxide reductase, chain B [Campylobacter jejuni subsp. jejuni 81-176] gi|167006119|ref|ZP_02271877.1| dimethylsulfoxide reductase, chain B [Campylobacter jejuni subsp. jejuni 81-176] gi|87249630|gb|EAQ72589.1| dimethylsulfoxide reductase, chain B [Campylobacter jejuni subsp. jejuni 81-176] gi|107770406|gb|ABF83738.1| anaerobic dimethyl sulfoxide reductase subunit B-like protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 218 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C + C++ CP + + + I CI C C CP A + + E Sbjct: 65 AYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDSMCIGCKACAMACPYGAPQFNHE 124 Query: 61 PGL 63 G Sbjct: 125 SGH 127 >gi|311280100|ref|YP_003942331.1| putative oxidoreductase, 4Fe-4S subunit [Enterobacter cloacae SCF1] gi|308749295|gb|ADO49047.1| putative oxidoreductase, 4Fe-4S subunit [Enterobacter cloacae SCF1] Length = 158 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 20/52 (38%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C++ CV CPV GE + CI C C CP I + Sbjct: 51 CHQCENAPCVAACPVRALTMGEERVEADSARCIGCQSCVVACPFGVITIEMP 102 >gi|300785105|ref|YP_003765396.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] gi|299794619|gb|ADJ44994.1| Fe-S-cluster-containing hydrogenase [Amycolatopsis mediterranei U32] Length = 346 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI--KPDT 59 ++ C C H C++VCP + E + + D C CG C CP I +PD Sbjct: 163 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVIDRRPDD 219 >gi|293416140|ref|ZP_06658780.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] gi|291432329|gb|EFF05311.1| oxidoreductase Fe-S binding subunit [Escherichia coli B185] Length = 644 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C +CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIDCPFGVVEMVDTIAQK 116 >gi|168333855|ref|ZP_02692098.1| hypothetical protein Epulo_03060 [Epulopiscium sp. 'N.t. morphotype B'] Length = 224 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C C D Y+ E I C +CG C CP +AI Sbjct: 171 IGSGCISCG--KCKRECSFDAIYQDERQYKIDGSRCDECGSCFLVCPANAI 219 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 40 CIDCGVCEPECPVDAIKPDTEP 61 CI CG C+ EC DAI D Sbjct: 175 CISCGKCKRECSFDAIYQDERQ 196 >gi|157415803|ref|YP_001483059.1| hypothetical protein C8J_1484 [Campylobacter jejuni subsp. jejuni 81116] gi|157386767|gb|ABV53082.1| hypothetical protein C8J_1484 [Campylobacter jejuni subsp. jejuni 81116] gi|307748441|gb|ADN91711.1| Anaerobic dimethyl sulfoxide reductase chain B [Campylobacter jejuni subsp. jejuni M1] gi|315931264|gb|EFV10234.1| dimethylsulfoxide reductase, chain B [Campylobacter jejuni subsp. jejuni 327] Length = 218 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C + C++ CP + + + I CI C C CP A + + E Sbjct: 65 AYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDSMCIGCKACAMACPYGAPQFNHE 124 Query: 61 PGL 63 G Sbjct: 125 SGH 127 >gi|189424213|ref|YP_001951390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] gi|189420472|gb|ACD94870.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter lovleyi SZ] Length = 256 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Query: 5 VTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEP 61 + C C CV+ CPV ++ + + +H DE CI C C+ CP A D Sbjct: 60 IPVLCNHCSDAPCVKACPVKPKAMFKTPDGITMHNDERCIGCRRCQKACPYSA--MDVAK 117 Query: 62 GLELWLKINSEYATQWPNITTKK 84 + I++ T+ P+ ++ Sbjct: 118 EKAEYSVISANSGTEAPHKASRD 140 >gi|94969628|ref|YP_591676.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94551678|gb|ABF41602.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 261 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C C VCPV + E I+ + C+ C C CP K + E L Sbjct: 60 CQHCLEPACASVCPVGALQKTEIGPVIYEEHRCMGCRYCMAACPFGVPKYEWEKPLPQ 117 >gi|66735109|gb|AAY53799.1| putative oxidoreductase [Campylobacter jejuni] Length = 219 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +C C + C++ CP + + + I CI C C CP A + + E Sbjct: 65 AYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDSMCIGCKACAMACPYGAPQFNHE 124 Query: 61 PGL 63 G Sbjct: 125 SGH 127 >gi|56412594|ref|YP_149669.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361529|ref|YP_002141165.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126851|gb|AAV76357.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093005|emb|CAR58438.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 287 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAAHCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|330835594|ref|YP_004410322.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567733|gb|AEB95838.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera cuprina Ar-4] Length = 87 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + C CK C++VCP + + + +H + C++CG CP DAI G Sbjct: 22 VNLDICRTCKEKPCIKVCPAGTYERSGDVIEVHYERCLECGAALVACPFDAISFKFPEG 80 >gi|289193023|ref|YP_003458964.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus sp. FS406-22] gi|288939473|gb|ADC70228.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus sp. FS406-22] Length = 269 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + ENC+ C C+++C D + I+P C CG CE C +AI+P Sbjct: 63 YKINENCVKCG--KCLDICQFDAIED----FKINPILCEGCGACELICEFNAIEP 111 >gi|258627118|ref|ZP_05721914.1| electron transport complex protein RnfB [Vibrio mimicus VM603] gi|258580636|gb|EEW05589.1| electron transport complex protein RnfB [Vibrio mimicus VM603] Length = 195 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|282600278|ref|ZP_05973699.2| anaerobic dimethyl sulfoxide reductase, B subunit [Providencia rustigianii DSM 4541] gi|282565941|gb|EFB71476.1| anaerobic dimethyl sulfoxide reductase, B subunit [Providencia rustigianii DSM 4541] Length = 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 +T +C C C++VCP + + + + + + ++CI C +C CP A D G Sbjct: 31 FITMSCNHCDDPQCLKVCPANTYSKRADGIVVQDHEKCIGCQMCIMACPYHAPVFDPAEG 90 >gi|150401639|ref|YP_001325405.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014342|gb|ABR56793.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 398 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VV +NC+ C C VCPV+ + + ++CI C VC CP +AI Sbjct: 143 VVMDNCVGCGV--CPPVCPVEAITMENDRAVVDTEKCIYCSVCAQTCPWNAIF 193 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +E CI C C E+CP D + +N P C CG+C CPVDA+ D + Sbjct: 212 SEKCIGC--IACAEICPGDMIKIDSKNIAVELPKACPACGLCVGVCPVDALYLDVD 265 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCF------------YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+LC+ CV +CP+D + D C+ CGVC P CPV+AI Sbjct: 107 CVLCEL--CVGICPIDIISIPNKIDNPKKEIPSPKEAIVVMDNCVGCGVCPPVCPVEAIT 164 Query: 57 PDTE 60 + + Sbjct: 165 MEND 168 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C+LC CV CP + + +P +C CG C C Sbjct: 50 CVLCL--SCVNACPTGALCVINDTINYNPIKCTKCGACAKVCTTG 92 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 11/68 (16%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF---------LAIHPDECIDCGVCEPECPV 52 V TE CI C + C + CP + + + ++CI C C CP Sbjct: 170 AVVDTEKCIYC--SVCAQTCPWNAIFVNGKMPTKRHKKIDFKLDSEKCIGCIACAEICPG 227 Query: 53 DAIKPDTE 60 D IK D++ Sbjct: 228 DMIKIDSK 235 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C EVCP D E ++ CI CG C CP A+K Sbjct: 288 KKCAEVCPTDAIVINEESKSV--KMCIVCGACATTCPTGALK 327 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 10/53 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVD 53 CI+C C CP G N + +P C CG C CP+D Sbjct: 311 CIVCG--ACATTCPTGALKVGNIKHNGKDYNRIVFNPSMCNSCGDCVGVCPMD 361 >gi|312793474|ref|YP_004026397.1| Fe-S cluster domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876011|ref|ZP_07736000.1| Fe-S cluster domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797209|gb|EFR13549.1| Fe-S cluster domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|312180614|gb|ADQ40784.1| Fe-S cluster domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 443 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 EKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 >gi|309389497|gb|ADO77377.1| electron transport complex, RnfABCDGE type, B subunit [Halanaerobium praevalens DSM 2228] Length = 329 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C + C +VCPVD +N I ++C++CG C +CP I+ + Sbjct: 218 CIAC--SLCAKVCPVDAIEIKDNLAVIDYEKCVNCGKCAEKCPTGTIQFE 265 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + +NC+ C T C CPV+ E +N I D+CI CG+C C V A+ Sbjct: 274 INDNCVGC--TLCARACPVEAIEGEVKNRHQIDQDKCIQCGLCFEACNVKAV 323 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DC VCP D Y EN L I P++C CG C ECP Sbjct: 145 GFGDCESVCPFDAIYMSENGLPQIDPEKCTACGKCITECP 184 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C+ C C E CP +EG+ + I+ D C+ C +C CPV+AI+ + + Sbjct: 245 EKCVNCG--KCAEKCPTGTIQFEGKMIEKVEIN-DNCVGCTLCARACPVEAIEGEVKNRH 301 Query: 64 E 64 + Sbjct: 302 Q 302 >gi|301062599|ref|ZP_07203231.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300443279|gb|EFK07412.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 249 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDA 54 NC+ C+ CVE CP Y+ + I CI CG C P CP A Sbjct: 60 NCMQCEKPTCVEACPTGATYKDPLDGTVRIDRRLCIGCGQCLPACPYGA 108 >gi|290475319|ref|YP_003468207.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus bovienii SS-2004] gi|289174640|emb|CBJ81434.1| putative 4Fe-4S ferredoxin-type protein [Xenorhabdus bovienii SS-2004] Length = 205 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 110 AFIDEENCIGC--TKCIQACPVDAIIGANRAIHTVVEDLCTGCDLCVAPCPTDCI 162 >gi|326201391|ref|ZP_08191263.1| NADH dehydrogenase (quinone) [Clostridium papyrosolvens DSM 2782] gi|325988959|gb|EGD49783.1| NADH dehydrogenase (quinone) [Clostridium papyrosolvens DSM 2782] Length = 597 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M Y V C C C +VCP+ C GE I +C CGVC +CP AI Sbjct: 540 MKYTVEASKCKSCG--ICAKVCPMSCIK-GEKKVPYVIDNTKCAKCGVCMEKCPFKAI 594 >gi|253577815|ref|ZP_04855087.1| NADH dehydrogenase I subunit F [Ruminococcus sp. 5_1_39B_FAA] gi|251850133|gb|EES78091.1| NADH dehydrogenase I subunit F [Ruminococcus sp. 5_1_39BFAA] Length = 623 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++ E CI C C + CP I D CI CG C+ C DA+ + Sbjct: 568 HINPEFCIGCG--KCAKNCPAGAISGKIKHPYHIDNDICIKCGACKDNCNFDAVYVE 622 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 13/25 (52%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I+P+ CI CG C CP AI Sbjct: 565 RQFHINPEFCIGCGKCAKNCPAGAI 589 >gi|224050711|ref|XP_002196899.1| PREDICTED: similar to NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Taeniopygia guttata] Length = 235 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 134 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 190 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 134 ERCIACKLCEAVCPAQAITIEAEPRAD 160 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 175 CIYCGF--CQEACPVDAIVEGPNF 196 >gi|241949545|ref|XP_002417495.1| NADH-ubiquinone oxidoreductase 23 subunit, mitochondrial precursor, putative; mitochondrial complex I, NUIM subunit, putative [Candida dubliniensis CD36] gi|223640833|emb|CAX45148.1| NADH-ubiquinone oxidoreductase 23 subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 247 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 146 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 202 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + E Sbjct: 127 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEE 169 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 187 CIYCGY--CQESCPVDAIVETPNVEY 210 >gi|218885423|ref|YP_002434744.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756377|gb|ACL07276.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 169 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ +CV+VCP E + + + D+CI CG C CP + + + Sbjct: 59 PCFHCEQPECVDVCPTGAMTKREADGIVYVEADDCIGCGACLEACPWHIPQWNEDGD 115 >gi|119871679|ref|YP_929686.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673087|gb|ABL87343.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 220 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV CP + Y+ + L + CI C C CP A+ D + Sbjct: 63 CQHCDKPYCVATCPTNALYKDRDGLVKLRESSCIGCRYCLAACPYGAVWWDEK 115 >gi|24375983|ref|NP_720026.1| iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] gi|24350982|gb|AAN57470.1|AE015883_1 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 558 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V E C LC CV +CP +G + L C+ CG+CE CP I Sbjct: 423 VNVEKCTLC--MSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCESACPEKVI 474 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + P C G C CP AI D L +N Sbjct: 203 CLNFCPADAISSVAKKIEVDPYLCHGAGSCASTCPTGAISYDLPTPQALHSYLNKMISRY 262 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 263 REQAQTAPVI 272 >gi|23014022|ref|ZP_00053863.1| COG1145: Ferredoxin [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+E C C CP E L+ P CIDCG+C CP A+ D Sbjct: 253 VSEACNNSG--ACAAHCPTQALQSWVGEAAEGLSFDPRSCIDCGLCVSACPGSALSFDRS 310 Query: 61 PG 62 G Sbjct: 311 AG 312 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C E CPV + + + C+ CG C CPV AI+ Sbjct: 27 ACAEGCPVAAIEAMGDVPTV-SETCVGCGSCAVACPVGAIE 66 >gi|257460004|ref|ZP_05625108.1| iron-sulfur cluster-binding domain protein [Campylobacter gracilis RM3268] gi|257442445|gb|EEV17584.1| iron-sulfur cluster-binding domain protein [Campylobacter gracilis RM3268] Length = 406 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Query: 15 TDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 CVEVCP + + F I CI CG C CP A+K + ++ +I Sbjct: 61 APCVEVCPTVAILKNDEKRELVFSYID---CIGCGACVSVCPSGALKF-AKLPQSVFGEI 116 Query: 70 NSEYATQWP 78 YA + P Sbjct: 117 AKLYAGKIP 125 >gi|227831507|ref|YP_002833287.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|229580456|ref|YP_002838856.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|229580894|ref|YP_002839293.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284999058|ref|YP_003420826.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|227457955|gb|ACP36642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|228011172|gb|ACP46934.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011610|gb|ACP47371.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446954|gb|ADB88456.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 89 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 V T+ C+ CK C +VCP + + I H + C++CG CP AIK G Sbjct: 23 VNTDICLTCKDKPCTKVCPAGTYEPSPDGRIIVHYERCLECGAALVACPYGAIKFRFPEG 82 Query: 63 LELW 66 + Sbjct: 83 GISY 86 >gi|160934810|ref|ZP_02082196.1| hypothetical protein CLOLEP_03685 [Clostridium leptum DSM 753] gi|156866263|gb|EDO59635.1| hypothetical protein CLOLEP_03685 [Clostridium leptum DSM 753] Length = 206 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T C C C VCP C I C+ CG C CP AI+ Sbjct: 153 YFITTGCTGCGD--CETVCPQSCIDLISVPAVIKQAHCLHCGNCYEICPAKAIE 204 >gi|120014|sp|P00193|FER_PEPAS RecName: Full=Ferredoxin Length = 54 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV+ ++CI C C CPV+ + + AI D CIDCG C CPV A P+ Sbjct: 1 AYVINDSCIACG--ACKPECPVN--IQQGSIYAIDADSCIDCGSCASVCPVGAPNPED 54 >gi|134300798|ref|YP_001114294.1| glycyl-radical activating family protein [Desulfotomaculum reducens MI-1] gi|134053498|gb|ABO51469.1| glycyl-radical enzyme activating protein family [Desulfotomaculum reducens MI-1] Length = 297 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 6/48 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + CI C CVE C G IH + C CG C CP A Sbjct: 53 DRCIGCGD--CVETCVNQAILPGG----IHKERCRRCGQCAAVCPTLA 94 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 7/44 (15%) Query: 21 CPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CP+ C + E L PD CI CG C C AI P Sbjct: 29 CPLKCLWCHNPESQDPEPQLMFWPDRCIGCGDCVETCVNQAILP 72 >gi|284165623|ref|YP_003403902.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] gi|284015278|gb|ADB61229.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Haloterrigena turkmenica DSM 5511] Length = 224 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI-KPDTEPGLEL 65 C C++ CV VCP + E + F+++H D C+ C C CP A PD+ G Sbjct: 92 CYHCENAPCVSVCPTNALQKEDDGFVSVHEDLCVGCQYCLSGCPFGAPQFPDSNDGAAQ 150 >gi|183985165|ref|YP_001853456.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium marinum M] gi|183178491|gb|ACC43601.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium marinum M] Length = 296 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 115 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVIE 166 >gi|171059653|ref|YP_001792002.1| RnfABCDGE type electron transport complex subunit B [Leptothrix cholodnii SP-6] gi|170777098|gb|ACB35237.1| electron transport complex, RnfABCDGE type, B subunit [Leptothrix cholodnii SP-6] Length = 224 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPDT 59 CI C T C++ CPVDC G + I D C C +C P CPVD I+ + Sbjct: 89 CIGC--TLCIKACPVDCIVGGHKRMHSVIEAD-CTGCELCLPACPVDCIQVEV 138 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Query: 24 DCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +C EG + I CI C +C CPVD I Sbjct: 72 ECGTEGPRTVVWIDEAWCIGCTLCIKACPVDCI 104 >gi|167569319|ref|ZP_02362193.1| ferredoxin [Burkholderia oklahomensis C6786] Length = 288 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCIAMIPV 137 Query: 58 -DTEPGLELWLKINSEYATQ 76 + G + W + ++ A Sbjct: 138 TGEKTGWDAWSQQQADAART 157 >gi|325959022|ref|YP_004290488.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330454|gb|ADZ09516.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 460 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT---EPGLEL 65 C C+ C+ CPVD ++ E+ D+C+ C +C CP +AI T EP E Sbjct: 30 CEACEDKPCLMSCPVDAIWKTEDGKIEIDDKCVGCVLCREACPYNAINMKTTLSEPIREN 89 Query: 66 WLKINSEYATQW 77 IN++ Q Sbjct: 90 VPNINTKLCRQC 101 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V+ +NCI C C+ CPV C E + + I D C+ CG C C +AI+ E Sbjct: 316 VIEDNCIGCG--ACMSECPVKCIELEMPSPVHID-DRCVHCGKCIETCQFNAIELAEE 370 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C+ C CV CP + ++ + + ++CI CG C+ CPV+AIK TE Sbjct: 399 EACMACG--ICVRKCPTNALKLEKDEVIVDTEKCILCGECDIICPVNAIKLKTE 450 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 6 TENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T+ C C CV+ C E I+ D C+ CG C CP +AIK Sbjct: 95 TKLCRQCG--ACVKACKTGSIQLISSGNEEAHSEINEDTCVRCGYCARVCPTEAIKY 149 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 10/76 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 + + C+ C C E CP + EN I+ C CG C C +I+ Sbjct: 57 IDDKCVGC--VLCREACPYNAINMKTTLSEPIRENVPNINTKLCRQCGACVKACKTGSIQ 114 Query: 57 PDTEPGLELWLKINSE 72 + E +IN + Sbjct: 115 LISSGNEEAHSEINED 130 Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPV-DAI 55 + C+ C + C VCP + GE + ++ +CI C C CP AI Sbjct: 130 DTCVRCGY--CARVCPTEAIKYGEILPRSVVGGKAIVVNQKDCIGCMTCTKVCPSRGAI 186 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 4 VVTENCILCKHTDCVEVCP-VDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKP 57 V ++CI C C +VCP G+ I+P C C C CP AIK Sbjct: 165 VNQKDCIGC--MTCTKVCPSRGAINVGKVSKLPFINPSYCARCEECMNVCPSAAIKY 219 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 24/79 (30%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL----------------------AIHPDECID 42 + + C+ C C+E C + E + + C+ Sbjct: 346 IDDRCVHCG--KCIETCQFNAIELAEEYFKVEDGKIFFKRDALTGQREGKIVTDVEACMA 403 Query: 43 CGVCEPECPVDAIKPDTEP 61 CG+C +CP +A+K + + Sbjct: 404 CGICVRKCPTNALKLEKDE 422 >gi|320527824|ref|ZP_08028992.1| 4Fe-4S binding domain protein [Solobacterium moorei F0204] gi|320131761|gb|EFW24323.1| 4Fe-4S binding domain protein [Solobacterium moorei F0204] Length = 254 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V++ CI C T C + CPV EN +EC C C CP AI Sbjct: 185 VSDACIGC--TLCAKKCPVTAIEMRENKPVWVKEECTMCLGCLHRCPKHAIFY 235 >gi|300987856|ref|ZP_07178407.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 200-1] gi|300306004|gb|EFJ60524.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 200-1] gi|324011433|gb|EGB80652.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 60-1] Length = 239 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + + A +P I Sbjct: 167 KCDFCAETRLAKGFPPIC 184 >gi|262043980|ref|ZP_06017063.1| hydrogenase-4 component A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038658|gb|EEW39846.1| hydrogenase-4 component A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 173 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C VCPV+ + + ++ C+ C +C CP AI+ Sbjct: 49 QMCHHCEDAPCATVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEF 99 >gi|239908372|ref|YP_002955113.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Desulfovibrio magneticus RS-1] gi|239798238|dbj|BAH77227.1| molybdopterin oxidoreductase iron-sulfur binding subunit [Desulfovibrio magneticus RS-1] Length = 250 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 C+ C++ CV VCPV ++ + + I D CI C C CP A Sbjct: 84 PCMQCENPPCVAVCPVTATWKNKQGVTVIDYDRCIGCRYCLTACPYGA 131 >gi|254167532|ref|ZP_04874384.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|197623795|gb|EDY36358.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] Length = 62 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV CPV+C + E + I D+CI CG C CPV AI D Sbjct: 11 CNYCG--ACVGSCPVNCMFLDETIVRIDEDKCIKCGFCIRACPVGAISAD 58 >gi|20094920|ref|NP_614767.1| flavoprotein [Methanopyrus kandleri AV19] gi|19888159|gb|AAM02697.1| Archaea-specific flavoprotein [Methanopyrus kandleri AV19] Length = 246 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V+ E C C CV+ CP + I C+ CG C CP DAI E + Sbjct: 145 VLRERCEGCG--ICVDACPRSAIDMVDGKAFIRLLRCVGCGKCAEACPEDAIHGGLEYEM 202 Query: 64 E 64 Sbjct: 203 R 203 >gi|50123379|ref|YP_052546.1| electron transport protein [Pectobacterium atrosepticum SCRI1043] gi|49613905|emb|CAG77358.1| electron transport protein [Pectobacterium atrosepticum SCRI1043] Length = 173 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D + + + CI C C CP AI Sbjct: 57 CRQCENAPCASVCPNDALVRDRDSIQVIQSRCIGCKSCVVACPFGAI 103 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 27/77 (35%), Gaps = 17/77 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENF---LAIHP-DECIDCGV---CEP 48 V+ CI CK CV CP EGE +H D C+D C Sbjct: 83 VIQSRCIGCK--SCVVACPFGAINVVTKASNDEGEAHPTQSEVHKCDLCVDVAQSPSCVS 140 Query: 49 ECPVDAIKPDTEPGLEL 65 CP A++ T L Sbjct: 141 VCPTSALRLVTADELRK 157 >gi|84386976|ref|ZP_00990000.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio splendidus 12B01] gi|84378266|gb|EAP95125.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrio splendidus 12B01] Length = 206 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ C C + CV+VCP ++ + + + CI C C CP A + + Sbjct: 60 SYYLSIACNHCTNPACVKVCPSGAMHKRDEDGLVVVDESVCIGCQHCSNACPYGAPQYNA 119 Query: 60 EPGL 63 + G Sbjct: 120 KKGH 123 >gi|332799832|ref|YP_004461331.1| Fe-S cluster domain-containing protein [Tepidanaerobacter sp. Re1] gi|332697567|gb|AEE92024.1| Fe-S cluster domain protein [Tepidanaerobacter sp. Re1] Length = 443 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C T+C++ CP + I ++CIDCG C CP A Sbjct: 16 DKCKGC--TNCIKGCPTEAIRVRNGKAHILDNKCIDCGECIRICPNSA 61 >gi|325960196|ref|YP_004291662.1| methyl-viologen-reducing hydrogenase subunit delta [Methanobacterium sp. AL-21] gi|325331628|gb|ADZ10690.1| methyl-viologen-reducing hydrogenase delta subunit [Methanobacterium sp. AL-21] Length = 771 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 20/73 (27%) Query: 6 TENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCGVCE 47 + C C C E+C ++ E + +I PD CI CG C Sbjct: 240 GDRCTSCG--RCAEICSINVPDEFNFNLTLRNAAYKPFAGALPSSFSIDPDACIKCGKCV 297 Query: 48 PECPVDAIKPDTE 60 CPVDAI +++ Sbjct: 298 EACPVDAINLESK 310 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C C C+E CP Y + + + P C CG C C A+ Sbjct: 580 DRCNQCL--SCLEQCPAKAIYL-DKMVEVDPVACTGCGYCVSLCETKALSLPLYSDQ 633 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 13/29 (44%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 NF + D C C C +CP AI D Sbjct: 572 PNFAVLDQDRCNQCLSCLEQCPAKAIYLD 600 >gi|317484987|ref|ZP_07943870.1| CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923725|gb|EFV44928.1| CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 294 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C C C E C D + + I P C CGVC CP AI + E + Sbjct: 66 DACRRCG--ICFEHCRFDAVKKDGDVYGIDPLRCEGCGVCVALCPAKAIAFPEKECGEWY 123 Query: 67 L 67 + Sbjct: 124 V 124 >gi|312127646|ref|YP_003992520.1| Fe-S cluster domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777665|gb|ADQ07151.1| Fe-S cluster domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 443 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + + I CIDCG C CP A Sbjct: 12 EKCKGC--TNCIKRCPTEAIRVRNSKARIIDQRCIDCGECIRTCPYHA 57 >gi|306815076|ref|ZP_07449232.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli NC101] gi|305851724|gb|EFM52177.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli NC101] gi|324007028|gb|EGB76247.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 57-2] Length = 239 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + + A +P I Sbjct: 167 KCDFCAETRLAKGFPPIC 184 >gi|167948048|ref|ZP_02535122.1| polysulfide reductase, subunit B, putative [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 177 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA----IKPDTEPGL 63 C C + C+ VCP Y+ +N + + D C+ C C CP DA D E G Sbjct: 27 CNHCDNPPCMSVCPTGATYKMDNGIVMVDEDLCMGCRACAMACPYDARRAVTYDDVEKGK 86 Query: 64 ELWLK 68 + + Sbjct: 87 AFYGE 91 >gi|186475080|ref|YP_001856550.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia phymatum STM815] gi|184191539|gb|ACC69504.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phymatum STM815] Length = 85 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCVQVCPVEC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|88608014|ref|YP_506692.1| NADH dehydrogenase subunit I [Neorickettsia sennetsu str. Miyayama] gi|115502534|sp|Q2GCV4|NUOI_NEOSM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|88600183|gb|ABD45651.1| NADH dehydrogenase I, I subunit [Neorickettsia sennetsu str. Miyayama] Length = 160 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 21/99 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 58 ERCIACKL--CEVVCPAQAITIEAAPRESDGSRRATKYDIDMTKCIYCGFCQEACPVDAI 115 Query: 56 KPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 E + + N E + KK+ L + +K + Sbjct: 116 ---VEGPNFEFARENRE-----DLLYDKKKLLDNGSKWE 146 >gi|327401443|ref|YP_004342282.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316951|gb|AEA47567.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 659 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 4/70 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 ++ E C C C+ +CP E ++P C CG C CP A + Sbjct: 587 AFIREERCSGC--RICIGMCPYGAISFDEEKGVAVVNPAMCRGCGTCVAACPSKAAQQYL 644 Query: 60 EPGLELWLKI 69 +++ +I Sbjct: 645 FRDEQIYAEI 654 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 14/33 (42%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 N I + C C +C CP AI D E G Sbjct: 584 PNIAFIREERCSGCRICIGMCPYGAISFDEEKG 616 >gi|312797358|ref|YP_004030280.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] gi|312169133|emb|CBW76136.1| Ferredoxin [Burkholderia rhizoxinica HKI 454] Length = 90 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP G I PD+C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYLIDPDKCTECIGHFDEPQCVQVCPVEC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|254166869|ref|ZP_04873723.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|289596256|ref|YP_003482952.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] gi|197624479|gb|EDY37040.1| 4Fe-4S binding domain protein [Aciduliprofundum boonei T469] gi|289534043|gb|ADD08390.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aciduliprofundum boonei T469] Length = 62 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV CPV+C + E + I D+CI CG C CPV AI D Sbjct: 11 CNYCG--ACVGSCPVNCMFLDETIVRIDEDKCIKCGFCIRACPVGAISAD 58 >gi|163931196|pdb|3BK7|A Chain A, Structure Of The Complete Abce1RNAASE-L Inhibitor Protein From Pyrococcus Abysii Length = 607 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 27 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 84 Query: 56 KPDTEPGL 63 P Sbjct: 85 SIVNLPEQ 92 >gi|167916633|ref|ZP_02503724.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 112] gi|254187013|ref|ZP_04893528.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei Pasteur 52237] gi|157934696|gb|EDO90366.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei Pasteur 52237] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|114762113|ref|ZP_01441581.1| iron-sulfur cluster-binding protein [Pelagibaca bermudensis HTCC2601] gi|114545137|gb|EAU48140.1| iron-sulfur cluster-binding protein [Roseovarius sp. HTCC2601] Length = 249 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPG 62 +C+ C CV VCP + E+ + + +E CI CG+C CP A + D G Sbjct: 81 SCLHCDDAPCVTVCPTGASYKRVEDGIVLVEEEACIGCGLCAWACPYGARELDLAAG 137 >gi|57235074|ref|YP_180863.1| [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit, putative [Dehalococcoides ethenogenes 195] gi|57225522|gb|AAW40579.1| [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit, putative [Dehalococcoides ethenogenes 195] Length = 267 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C CV VCPV ++ + D+C C C+ CP K + + Sbjct: 73 CLHCYEPACVSVCPVGALHKRPTGAVVWDQDKCFGCRYCQNACPFQIPKFEWDDNWAK 130 >gi|26247920|ref|NP_753960.1| putative ferredoxin-like protein ydhX [Escherichia coli CFT073] gi|227885913|ref|ZP_04003718.1| formate-dependent nitrite reductase [Fe-S] protein [Escherichia coli 83972] gi|300995335|ref|ZP_07181032.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 45-1] gi|301051000|ref|ZP_07197845.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 185-1] gi|26108323|gb|AAN80525.1|AE016761_100 Putative ferredoxin-like protein ydhX [Escherichia coli CFT073] gi|227837092|gb|EEJ47558.1| formate-dependent nitrite reductase [Fe-S] protein [Escherichia coli 83972] gi|300297333|gb|EFJ53718.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 185-1] gi|300406168|gb|EFJ89706.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 45-1] gi|312946271|gb|ADR27098.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O83:H1 str. NRG 857C] gi|315290549|gb|EFU49923.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 153-1] Length = 239 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + + A +P I Sbjct: 167 KCDFCAETRLAKGFPPIC 184 >gi|14521449|ref|NP_126925.1| putative ATPase RIL [Pyrococcus abyssi GE5] gi|5458668|emb|CAB50155.1| ABC transporter ATP-binding protein [Pyrococcus abyssi GE5] Length = 593 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 13 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 70 Query: 56 KPDTEPGL 63 P Sbjct: 71 SIVNLPEQ 78 >gi|305665372|ref|YP_003861659.1| putative iron-sulfur protein [Maribacter sp. HTCC2170] gi|88710127|gb|EAR02359.1| probable iron-sulfur protein [Maribacter sp. HTCC2170] Length = 472 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLEL 65 +CI CK CV VCP + L ECI+C C EC DAI D GL Sbjct: 268 DCIDCKQ--CVHVCPTNIDIRNGTQL-----ECINCTACIDEC--DAIMEKIDKPKGLIR 318 Query: 66 W 66 + Sbjct: 319 Y 319 >gi|268678836|ref|YP_003303267.1| cobyrinic acid ac-diamide synthase [Sulfurospirillum deleyianum DSM 6946] gi|268616867|gb|ACZ11232.1| Cobyrinic acid ac-diamide synthase [Sulfurospirillum deleyianum DSM 6946] Length = 292 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + ++ E C C C +VC D + C CG CE C ++AI + Sbjct: 61 LAHIDPETCRNCG--RCAKVCRFDAIVLENGRYVVDELSCEGCGYCEKVCRLNAISMNER 118 Query: 61 PGLELWL 67 + Sbjct: 119 LAGAWFT 125 >gi|258623674|ref|ZP_05718660.1| electron transport complex protein RnfB [Vibrio mimicus VM573] gi|262171979|ref|ZP_06039657.1| electron transport complex protein RnfB [Vibrio mimicus MB-451] gi|258584040|gb|EEW08803.1| electron transport complex protein RnfB [Vibrio mimicus VM573] gi|261893055|gb|EEY39041.1| electron transport complex protein RnfB [Vibrio mimicus MB-451] Length = 195 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|167899982|ref|ZP_02487383.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 7894] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|145589226|ref|YP_001155823.1| NADH dehydrogenase subunit I [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047632|gb|ABP34259.1| NADH dehydrogenase subunit I [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 163 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G + I +CI CG CE CPVDAI Sbjct: 62 ERCIGCKL--CEAVCPAYAITIETAERDDGTRRTSRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +T + Sbjct: 62 ERCIGCKLCEAVCPAYAITIETAERDD 88 >gi|315187124|gb|EFU20881.1| Fe-S cluster domain protein [Spirochaeta thermophila DSM 6578] Length = 574 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y VT +C C C+ CPV + + C+ CG C CP A Sbjct: 8 YTVTSDCFDC--YKCIRECPVKAIRISSGRAEVVEELCLYCGHCVEVCPSGA 57 >gi|297627205|ref|YP_003688968.1| Anaerobic dimethyl sulfoxide reductase, chain B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922970|emb|CBL57552.1| Anaerobic dimethyl sulfoxide reductase, chain B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 214 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 TY + +C C+ CV+VCP + ++ + +C+ C CE C A + + E Sbjct: 69 TYYTSISCNHCEDPLCVQVCPTTAMTQRDDGTVFVDQSKCVGCRYCEWACAYGAPQFNAE 128 Query: 61 PGL 63 G Sbjct: 129 AGH 131 >gi|261252304|ref|ZP_05944877.1| NrfC protein [Vibrio orientalis CIP 102891] gi|260935695|gb|EEX91684.1| NrfC protein [Vibrio orientalis CIP 102891] Length = 229 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C C++ CV VCP Y E + +H D+C+ CG C CP + E G Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKDKCVGCGYCLAACPYQVRFFNPEDG 154 >gi|186920127|ref|YP_001874781.1| NADH dehydrogenase subunit 8 [Hemiselmis andersenii] gi|186461073|gb|ACC78235.1| NADH dehydrogenase subunit 8 [Hemiselmis andersenii] Length = 163 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP Y+G I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIEAEPRYDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 118 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 62 ERCIACKLCEAVCPAQAITIEAEP 85 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 103 CIFCGF--CQEACPVDAIVEGPNFEY 126 >gi|158522075|ref|YP_001529945.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510901|gb|ABW67868.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 355 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V T+ C C+ C++ C + ++ + + CI CG+C CP AI +P Sbjct: 274 VDTDECTGCE--ACLDRCQMGAIRLNADDVAEVDLNRCIGCGLCVTTCPTQAITLVAKPE 331 Query: 63 LE 64 E Sbjct: 332 PE 333 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 9/69 (13%) Query: 9 CILCKHTDCV------EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C V P + ++ + DEC C C C + AI+ + + Sbjct: 243 CNCCGDCCGVLVALKKHPRPAE-IVFANHYAQVDTDECTGCEACLDRCQMGAIRLNADDV 301 Query: 63 LELWLKINS 71 E + +N Sbjct: 302 AE--VDLNR 308 >gi|67641868|ref|ZP_00440634.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|217424178|ref|ZP_03455677.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 576] gi|251768078|ref|ZP_02269399.2| iron-sulfur cluster-binding protein [Burkholderia mallei PRL-20] gi|254182460|ref|ZP_04889054.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1655] gi|254205447|ref|ZP_04911800.1| iron-sulfur cluster-binding protein [Burkholderia mallei JHU] gi|254262448|ref|ZP_04953313.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1710a] gi|147755033|gb|EDK62097.1| iron-sulfur cluster-binding protein [Burkholderia mallei JHU] gi|184212995|gb|EDU10038.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1655] gi|217392643|gb|EEC32666.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 576] gi|238522879|gb|EEP86321.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|243060877|gb|EES43063.1| iron-sulfur cluster-binding protein [Burkholderia mallei PRL-20] gi|254213450|gb|EET02835.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1710a] Length = 276 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 83 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 136 >gi|324999411|ref|ZP_08120523.1| formate dehydrogenase beta subunit [Pseudonocardia sp. P1] Length = 346 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 166 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 216 >gi|258515969|ref|YP_003192191.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779674|gb|ACV63568.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +++ C+ C C VCPV + EN I ++CI C C CP +A Sbjct: 190 ISDKCLQCGF--CARVCPVGAI-DLENSALIDKEKCILCCACIKGCPENA 236 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPD 58 +F++I D+C+ CG C CPV AI + Sbjct: 186 DFISI-SDKCLQCGFCARVCPVGAIDLE 212 >gi|167761220|ref|ZP_02433347.1| hypothetical protein CLOSCI_03625 [Clostridium scindens ATCC 35704] gi|167660886|gb|EDS05016.1| hypothetical protein CLOSCI_03625 [Clostridium scindens ATCC 35704] Length = 468 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + CI C +C++ CP I P+ C+DCG C CP A Sbjct: 24 DACIGC--INCIKYCPTQAIRVHNGKAKITPEFCVDCGRCLRYCPHHA 69 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + D CI C C CP AI+ Sbjct: 21 LDEDACIGCINCIKYCPTQAIR 42 >gi|297582957|ref|YP_003698737.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297141414|gb|ADH98171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 225 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA-IKPDTEPGL 63 T C C + C +CP Y E+ + + D+CI C C CP +A I + + Sbjct: 99 TAQCNHCHNAPCERICPTQATYLNEDGIMVMDHDKCIGCKGCVAACPYNARIWSEAKQTP 158 Query: 64 EL 65 E Sbjct: 159 EK 160 >gi|45358387|ref|NP_987944.1| coenzyme F420-non-reducing hydrogenase subunit beta [Methanococcus maripaludis S2] gi|44921145|emb|CAF30380.1| coenzyme F420-non-reducing hydrogenase subunit beta [Methanococcus maripaludis S2] Length = 397 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VTE+C+ C C+ CPV + D CI C +C CP +AI Sbjct: 131 VTEDCVGCGV--CISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIF 180 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V ++ CI C C + CP D +A+ P C CG+C+ CPVDAI+ E Sbjct: 198 VDSDLCIGCGD--CTDKCPRDLIVL-NEMVAVPPKGCPACGLCKAACPVDAIELVVE 251 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 10/53 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVD 53 CI C CV+ CP D G+ + P+ C CG C CP D Sbjct: 310 CIRCG--ACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYD 360 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 12/64 (18%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECP 51 V ++CI C + C + CP + + ++ D CI CG C +CP Sbjct: 157 AVVDKDSCIYC--SICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCP 214 Query: 52 VDAI 55 D I Sbjct: 215 RDLI 218 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCP-----VDCFYEGENFLAIHPDE-------CIDCGVCEPECPVDAIK 56 C+ C CV+ CP ++ E P E C+ CGVC ECPV A+ Sbjct: 94 CVGC--MKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALS 151 Query: 57 PDTE 60 + E Sbjct: 152 IEGE 155 >gi|315453072|ref|YP_004073342.1| ferredoxin, 4Fe-4S [Helicobacter felis ATCC 49179] gi|315132124|emb|CBY82752.1| ferredoxin, 4Fe-4S [Helicobacter felis ATCC 49179] Length = 84 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V++ CI C C E CP + E + I PD C +C C CPVDA Sbjct: 1 MSLLVSQECIACD--ACREECPTEAIDENDPIYNIDPDRCTECIGYSDEPNCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 IMPD 62 >gi|296415821|ref|XP_002837584.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633457|emb|CAZ81775.1| unnamed protein product [Tuber melanosporum] Length = 232 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 131 ERCIACKL--CEAICPALAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 188 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 189 ESP----------NAEYATE 198 >gi|295097941|emb|CBK87031.1| hypothetical protein ENC_37430 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 291 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT C+ + C +VCPV F ++ +++ CI+CG C CP +AI Sbjct: 12 VTHACVRRRFRHASCLACADVCPVQAFSFTDSSVSVDDSRCIECGDCLFVCPAEAI 67 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TE+C+LC C C + L + C CG CE C AI Sbjct: 190 TESCVLCG--ACWRSCTENAIRFENAELVVETGRCTGCGGCEAVCQHAAI 237 >gi|297526580|ref|YP_003668604.1| dihydroorotate dehydrogenase family protein [Staphylothermus hellenicus DSM 12710] gi|297255496|gb|ADI31705.1| dihydroorotate dehydrogenase family protein [Staphylothermus hellenicus DSM 12710] Length = 406 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CI C C +VC + EG+ ++ D C CG+C CP AI + E Sbjct: 350 CIGCGF--CEQVCDYNAVKVLPSEEGKRIAQVNHDLCYGCGLCTSVCPTRAIHFEEELD 406 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 + P +CI CG CE C +A+K + ++N + Sbjct: 344 VVDPRKCIGCGFCEQVCDYNAVKVLPSEEGKRIAQVNHDL 383 >gi|255656166|ref|ZP_05401575.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-23m63] gi|296450400|ref|ZP_06892156.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP08] gi|296879477|ref|ZP_06903471.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP07] gi|296260661|gb|EFH07500.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP08] gi|296429623|gb|EFH15476.1| probable iron-sulfur subunit of hydrogenase [Clostridium difficile NAP07] Length = 151 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C C++VCP +CF + E F+ + CI C +CE C A Sbjct: 65 ACIHCDEPKCLDVCPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGA 111 >gi|226323626|ref|ZP_03799144.1| hypothetical protein COPCOM_01401 [Coprococcus comes ATCC 27758] gi|225207810|gb|EEG90164.1| hypothetical protein COPCOM_01401 [Coprococcus comes ATCC 27758] Length = 622 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C C + C CP EG ++ I+ ++CI CG C +CP AI + Sbjct: 571 EICKGC--SKCARNCPAGAI-EGVLKSPYHINQEKCIKCGACMEQCPFKAIHIE 621 Score = 40.5 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 11/26 (42%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIK 56 I P+ C C C CP AI+ Sbjct: 564 RKFQIDPEICKGCSKCARNCPAGAIE 589 >gi|212223688|ref|YP_002306924.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] gi|212008645|gb|ACJ16027.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] Length = 163 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPV 52 V NC C+ C+EVCP Y E+ + I +CI C +C CP Sbjct: 41 VPLNCRHCEKAPCIEVCPTKAIYRDEDGAVVIDESKCIGCYMCSAVCPY 89 >gi|226505580|ref|NP_001149640.1| LOC100283266 [Zea mays] gi|194703360|gb|ACF85764.1| unknown [Zea mays] gi|195605168|gb|ACG24414.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Zea mays] gi|195628756|gb|ACG36208.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Zea mays] Length = 223 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|167748568|ref|ZP_02420695.1| hypothetical protein ANACAC_03341 [Anaerostipes caccae DSM 14662] gi|167651882|gb|EDR96011.1| hypothetical protein ANACAC_03341 [Anaerostipes caccae DSM 14662] Length = 416 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 6 TENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 TE+C C C C D E + L+I PD+C CGVC C Sbjct: 52 TESCESCAYDRACKNSCIFDAIEEVDGKLSIDPDKCSGCGVCIESC 97 >gi|20089551|ref|NP_615626.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19914464|gb|AAM04106.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit 6 (predicted alternative beta subunit) [Methanosarcina acetivorans C2A] Length = 264 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI CK C + CP E I ++C CG C CP AI+ Sbjct: 217 CIGCK--KCEKECPAGAIRVTEFLAEIDQEKCTACGACVAICPQKAIE 262 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 CV+ C GE+ ++ C CG C CP Sbjct: 148 CVQACQFGALSMGEDGFPVVNKALCTSCGNCIAACP 183 >gi|332752022|gb|EGJ82415.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri 4343-70] gi|332999188|gb|EGK18775.1| cytochrome c nitrite reductase, Fe-S protein [Shigella flexneri K-218] Length = 223 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHVPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|332528759|ref|ZP_08404736.1| NADH dehydrogenase subunit I [Hylemonella gracilis ATCC 19624] gi|332041825|gb|EGI78174.1| NADH dehydrogenase subunit I [Hylemonella gracilis ATCC 19624] Length = 180 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 79 ERCIACKL--CEAVCPAMAITIESDARADGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 135 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 79 ERCIACKLCEAVCPAMAITIESDARAD 105 >gi|317479124|ref|ZP_07938264.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316904696|gb|EFV26510.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 300 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQNTI 265 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + ++C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEEKCTACGACAKACPKSIIE 189 Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 21/74 (28%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAI-----HPDE-----------CIDCG 44 V E C C C + CP +G+ I + D+ CI CG Sbjct: 168 VDEEKCTACG--ACAKACPKSIIEIRPQGKKSRRIYVQCVNKDKGAVARKACTVACIGCG 225 Query: 45 VCEPECPVDAIKPD 58 C CP +AI + Sbjct: 226 KCVKVCPFEAITLE 239 >gi|315122717|ref|YP_004063206.1| NADH dehydrogenase subunit I [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496119|gb|ADR52718.1| NADH dehydrogenase subunit I [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 159 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP ++G I +CI CG+C+ CPVDAI Sbjct: 57 ERCIACKL--CEAVCPAQAITIESGPRLHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAI 114 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI ++ P Sbjct: 57 ERCIACKLCEAVCPAQAITIESGP 80 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|296159919|ref|ZP_06842740.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] gi|295889902|gb|EFG69699.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] Length = 251 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYCAWACPYGARELDE 125 >gi|224824815|ref|ZP_03697922.1| NADH-quinone oxidoreductase, chain I [Lutiella nitroferrum 2002] gi|224603308|gb|EEG09484.1| NADH-quinone oxidoreductase, chain I [Lutiella nitroferrum 2002] Length = 162 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G + I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAMAITIESEQRDDGTRRTSRYDIDLTKCIFCGFCEEACPVDAI 117 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 61 ERCIACKLCEAVCPAMAITIESEQRDD 87 >gi|183599240|ref|ZP_02960733.1| hypothetical protein PROSTU_02699 [Providencia stuartii ATCC 25827] gi|188021470|gb|EDU59510.1| hypothetical protein PROSTU_02699 [Providencia stuartii ATCC 25827] Length = 208 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVIEDLCTGCDLCVAPCPTDCIE 163 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 112 IDEENCIGCTKCIQACPVDAI 132 >gi|167757175|ref|ZP_02429302.1| hypothetical protein CLORAM_02725 [Clostridium ramosum DSM 1402] gi|167703350|gb|EDS17929.1| hypothetical protein CLORAM_02725 [Clostridium ramosum DSM 1402] Length = 202 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+++ CI C C CP C G I D C+ CG+C CPV AI+ Sbjct: 149 YLISNRCIACD--RCKRECPQQCIKSGS-KYKIMQDHCLHCGLCYENCPVRAIE 199 >gi|121607727|ref|YP_995534.1| FAD/NAD(P)-binding oxidoreductase subunit [Verminephrobacter eiseniae EF01-2] gi|121552367|gb|ABM56516.1| benzoyl-CoA oxygenase, component A [Verminephrobacter eiseniae EF01-2] Length = 424 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ E+ + + C C C P CP AI Sbjct: 18 EICIRCN--TCEATCPVNAITHDEHNYVVRAELCNACLACIPPCPTGAI 64 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I P+ CI C CE CPV+AI D Sbjct: 15 IDPEICIRCNTCEATCPVNAITHDE 39 >gi|66047983|ref|YP_237824.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|71735790|ref|YP_276890.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. phaseolicola 1448A] gi|289672461|ref|ZP_06493351.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. syringae FF5] gi|302188123|ref|ZP_07264796.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. syringae 642] gi|63258690|gb|AAY39786.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas syringae pv. syringae B728a] gi|71556343|gb|AAZ35554.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326363|gb|EFW82416.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. glycinea str. B076] gi|320331646|gb|EFW87584.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. glycinea str. race 4] gi|330872369|gb|EGH06518.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. glycinea str. race 4] gi|330898969|gb|EGH30388.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. japonica str. M301072PT] gi|330944157|gb|EGH46276.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. pisi str. 1704B] gi|330954989|gb|EGH55249.1| ferredoxin, 4Fe-4S [Pseudomonas syringae Cit 7] gi|330957094|gb|EGH57354.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. maculicola str. ES4326] gi|330970962|gb|EGH71028.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. aceris str. M302273PT] gi|330980017|gb|EGH78283.1| ferredoxin, 4Fe-4S [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 83 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I+P+ C +C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVINPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEP 61 I D Sbjct: 59 IPLDENH 65 >gi|148255905|ref|YP_001240490.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. BTAi1] gi|156632578|sp|A5EK90|NUOI_BRASB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|146408078|gb|ABQ36584.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. BTAi1] Length = 162 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|313672282|ref|YP_004050393.1| NADH dehydrogenase (quinone) [Calditerrivibrio nitroreducens DSM 19672] gi|312939038|gb|ADR18230.1| NADH dehydrogenase (quinone) [Calditerrivibrio nitroreducens DSM 19672] Length = 595 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV E+ C C C +VCPV E I +C+ C C CP +AI Sbjct: 542 FVVAEDRCKKCG--ICFKVCPVGAITWEKGKVAYIDKSKCVKCRECIVNCPFNAI 594 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 + D C CG+C CPV AI + Sbjct: 542 FVVAEDRCKKCGICFKVCPVGAITWE 567 >gi|238020170|ref|ZP_04600596.1| hypothetical protein GCWU000324_00041 [Kingella oralis ATCC 51147] gi|237868564|gb|EEP69568.1| hypothetical protein GCWU000324_00041 [Kingella oralis ATCC 51147] Length = 83 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|224023565|ref|ZP_03641931.1| hypothetical protein BACCOPRO_00268 [Bacteroides coprophilus DSM 18228] gi|224016787|gb|EEF74799.1| hypothetical protein BACCOPRO_00268 [Bacteroides coprophilus DSM 18228] Length = 261 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTE 60 V + C C +C+EVCP Y + I + CI C C ECP A D+ Sbjct: 186 VCNDLCYACG--NCIEVCPTHAIYLSADGSQIETIAERCIRCCACVKECPTGARIFDSP 242 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 14/42 (33%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 P G N + D C CG C CP AI + Sbjct: 173 PYKPLPAGNNATPVCNDLCYACGNCIEVCPTHAIYLSADGSQ 214 >gi|218130044|ref|ZP_03458848.1| hypothetical protein BACEGG_01629 [Bacteroides eggerthii DSM 20697] gi|217987764|gb|EEC54091.1| hypothetical protein BACEGG_01629 [Bacteroides eggerthii DSM 20697] Length = 277 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V TE C C + C CP +G+ ++CI C C CP A DT Sbjct: 205 VDTELCNHCGY--CAVHCPASAIKKGDE-CYTDAEKCIRCCACVKGCPQKARTFDTP 258 >gi|126458164|ref|YP_001077136.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1106a] gi|134281741|ref|ZP_01768448.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 305] gi|167908290|ref|ZP_02495495.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei NCTC 13177] gi|237507755|ref|ZP_04520470.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] gi|242312856|ref|ZP_04811873.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1106b] gi|126231932|gb|ABN95345.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1106a] gi|134246803|gb|EBA46890.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 305] gi|234999960|gb|EEP49384.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei MSHR346] gi|242136095|gb|EES22498.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 1106b] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|53723318|ref|YP_112303.1| iron-sulfur cluster protein [Burkholderia pseudomallei K96243] gi|167924487|ref|ZP_02511578.1| iron-sulfur cluster protein [Burkholderia pseudomallei BCC215] gi|52213732|emb|CAH39786.1| iron-sulfur cluster protein [Burkholderia pseudomallei K96243] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|89901118|ref|YP_523589.1| RnfABCDGE type electron transport complex subunit B [Rhodoferax ferrireducens T118] gi|89345855|gb|ABD70058.1| electron transport complex, RnfABCDGE type, B subunit [Rhodoferax ferrireducens T118] Length = 232 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ + CI C T C+E CP D + + C C +C P CPVD IK + Sbjct: 77 AFIDEDWCIGC--TLCIEACPTDAILGSNKLMHTVIEAYCTGCELCLPVCPVDCIKLENV 134 Query: 59 --TEPGLELWLKINSEYATQ 76 G W + ++ A Sbjct: 135 TKAATGWAAWSRQQADLAQI 154 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 22/83 (26%), Gaps = 36/83 (43%) Query: 9 CILCKHTDC-------------VEVCPVDC----------------------FYEGENFL 33 C C + DC + CP E + Sbjct: 17 CTRCGYRDCAAYAQAVSTGAAGINQCPPGGEQGIAWLATITGQAVRALNPVHGAETPRSV 76 Query: 34 -AIHPDECIDCGVCEPECPVDAI 55 I D CI C +C CP DAI Sbjct: 77 AFIDEDWCIGCTLCIEACPTDAI 99 >gi|82543961|ref|YP_407908.1| oxidoreductase, Fe-S subunit [Shigella boydii Sb227] gi|81245372|gb|ABB66080.1| putative oxidoreductase, Fe-S subunit [Shigella boydii Sb227] Length = 239 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 154 >gi|53715919|ref|YP_106560.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 23344] gi|76818979|ref|YP_336603.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710b] gi|121597376|ref|YP_990671.1| iron-sulfur cluster-binding protein [Burkholderia mallei SAVP1] gi|126443292|ref|YP_001064213.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 668] gi|167829879|ref|ZP_02461350.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 9] gi|226199217|ref|ZP_03794777.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei Pakistan 9] gi|254176209|ref|ZP_04882867.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|254192604|ref|ZP_04899043.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei S13] gi|254203576|ref|ZP_04909937.1| iron-sulfur cluster-binding protein [Burkholderia mallei FMH] gi|254296602|ref|ZP_04964058.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 406e] gi|52421889|gb|AAU45459.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 23344] gi|76583452|gb|ABA52926.1| iron-sulfur cluster-binding protein [Burkholderia pseudomallei 1710b] gi|121225174|gb|ABM48705.1| iron-sulfur cluster-binding protein [Burkholderia mallei SAVP1] gi|126222783|gb|ABN86288.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 668] gi|147745815|gb|EDK52894.1| iron-sulfur cluster-binding protein [Burkholderia mallei FMH] gi|157806448|gb|EDO83618.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 406e] gi|160697251|gb|EDP87221.1| iron-sulfur cluster-binding protein [Burkholderia mallei ATCC 10399] gi|169649362|gb|EDS82055.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei S13] gi|225928624|gb|EEH24651.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei Pakistan 9] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|16767556|ref|NP_463171.1| anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416103|ref|YP_153178.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617453|ref|YP_001591418.1| hypothetical protein SPAB_05310 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552241|ref|ZP_02345994.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991519|ref|ZP_02572618.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231324|ref|ZP_02656382.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237018|ref|ZP_02662076.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243727|ref|ZP_02668659.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263351|ref|ZP_02685324.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467011|ref|ZP_02700859.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821231|ref|ZP_02833231.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444405|ref|YP_002043556.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447805|ref|YP_002048297.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470496|ref|ZP_03076480.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736806|ref|YP_002117241.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249022|ref|YP_002149221.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265548|ref|ZP_03165622.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365029|ref|YP_002144666.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243354|ref|YP_002218197.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387281|ref|ZP_03213893.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355074|ref|YP_002228875.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859459|ref|YP_002246110.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224586070|ref|YP_002639869.1| anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912763|ref|ZP_04656600.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16422868|gb|AAL23130.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130360|gb|AAV79866.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366817|gb|ABX70585.1| hypothetical protein SPAB_05310 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403068|gb|ACF63290.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406109|gb|ACF66328.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456860|gb|EDX45699.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712308|gb|ACF91529.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630641|gb|EDX49253.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096506|emb|CAR62115.1| anaerobic dimethyl sulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212725|gb|ACH50122.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243803|gb|EDY26423.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289949|gb|EDY29308.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937870|gb|ACH75203.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604379|gb|EDZ02924.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274855|emb|CAR39918.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323045|gb|EDZ10884.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330101|gb|EDZ16865.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334192|gb|EDZ20956.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337283|gb|EDZ24047.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342183|gb|EDZ28947.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347982|gb|EDZ34613.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711262|emb|CAR35639.1| anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470598|gb|ACN48428.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261249404|emb|CBG27268.1| anaerobic dimethyl sulfoxide reductase chain A [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996633|gb|ACY91518.1| putative anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160798|emb|CBW20329.1| anaerobic dimethyl sulfoxide reductase chain A [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915407|dbj|BAJ39381.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088715|emb|CBY98473.1| putative dimethyl sulfoxide reductase chain B protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223179|gb|EFX48249.1| Anaerobic dimethyl sulfoxide reductase chain B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615461|gb|EFY12381.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618521|gb|EFY15410.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622066|gb|EFY18916.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627138|gb|EFY23930.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631097|gb|EFY27861.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637684|gb|EFY34385.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642495|gb|EFY39096.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643629|gb|EFY40183.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650550|gb|EFY46958.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653503|gb|EFY49833.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659670|gb|EFY55913.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662120|gb|EFY58336.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666133|gb|EFY62311.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672553|gb|EFY68664.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675982|gb|EFY72053.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680467|gb|EFY76505.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684638|gb|EFY80642.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132647|gb|ADX20077.1| putative anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194622|gb|EFZ79814.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197169|gb|EFZ82309.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201714|gb|EFZ86778.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206228|gb|EFZ91190.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213238|gb|EFZ98040.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215610|gb|EGA00354.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222032|gb|EGA06418.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227899|gb|EGA12053.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229068|gb|EGA13197.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236321|gb|EGA20397.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237559|gb|EGA21620.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241775|gb|EGA25804.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248077|gb|EGA32014.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254592|gb|EGA38403.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258349|gb|EGA42026.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259627|gb|EGA43261.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265899|gb|EGA49395.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270342|gb|EGA53790.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625997|gb|EGE32342.1| putative anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630229|gb|EGE36572.1| putative anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991121|gb|AEF10104.1| putative anaerobic dimethylsulfoxide reductase subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 208 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ++ C C CV CP ++ + + + C+ C CE CP A + DT Sbjct: 59 TYYLSIACNHCDEPVCVSGCPTGAMHKRKEDGLVVVDDSVCVGCRYCEMRCPYGAPQFDT 118 Query: 60 EPG 62 + Sbjct: 119 QAN 121 >gi|83310159|ref|YP_420423.1| ferredoxin [Magnetospirillum magneticum AMB-1] gi|82945000|dbj|BAE49864.1| Ferredoxin [Magnetospirillum magneticum AMB-1] Length = 99 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C + CP + +GE I P+ C +C C CPVD Sbjct: 1 MALLITDQCINCDV--CEQECPNEAITQGEEIFVIDPNRCTECVGHYDYPQCIEHCPVDC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IIVDPD 64 >gi|319790804|ref|YP_004152444.1| benzoyL-CoA oxygenase/reductase, boxa protein [Variovorax paradoxus EPS] gi|315593267|gb|ADU34333.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Variovorax paradoxus EPS] Length = 429 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 11/76 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---------KP 57 E CI C C CPV+ +N + D C C C CP +I + Sbjct: 18 EICIRCN--TCEATCPVNAITHDDNNYVVRADVCNGCMACISPCPTGSIDNWRTMPLVRA 75 Query: 58 DTEPGLELWLKINSEY 73 T W ++ +E Sbjct: 76 YTIEEQLTWEELPAEL 91 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV+AI D Sbjct: 15 IDPEICIRCNTCEATCPVNAITHDDN 40 >gi|317059209|ref|ZP_07923694.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium sp. 3_1_5R] gi|313684885|gb|EFS21720.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium sp. 3_1_5R] Length = 594 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 Y +T+ C+ C T C CPV I E CI CG+C C AI Sbjct: 540 YRITDKCVGC--TLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAI 591 >gi|307266193|ref|ZP_07547736.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918797|gb|EFN49028.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 126 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVT CI CK+ C+ VCP + I ++C+ CG+C CP IK Sbjct: 47 VVT--CIQCKNAVCIRVCPSKAIKRQNGIVKIDKEKCVGCGICAQYCPQSVIK 97 >gi|258620204|ref|ZP_05715243.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM573] gi|258587562|gb|EEW12272.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM573] Length = 244 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 114 SCQHCENPPCVYVCPTGATYKDEATGIVDVHKERCVGCGYCIAACPYQ 161 >gi|257790270|ref|YP_003180876.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830451|ref|ZP_08163908.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474167|gb|ACV54487.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487918|gb|EGC90356.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 221 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C +CV+VCP ++ E+ I +CI C C CP + + E Sbjct: 58 YYLPVQCQHCADPECVKVCPTGASHKLEDGTVQIDKAKCIGCQFCAMSCPYNVRYLNEEE 117 Query: 62 G 62 G Sbjct: 118 G 118 >gi|239813114|ref|YP_002942024.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Variovorax paradoxus S110] gi|239799691|gb|ACS16758.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Variovorax paradoxus S110] Length = 428 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ +N + D C C C CP +I Sbjct: 18 EICIRCN--TCEATCPVNAITHDDNNYVVRADICNGCMACISPCPTGSI 64 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV+AI D Sbjct: 15 IDPEICIRCNTCEATCPVNAITHDDN 40 >gi|194218557|ref|XP_001498476.2| PREDICTED: similar to NADH dehydrogenase (ubiquinone) [Equus caballus] Length = 210 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAVCPAQAITIEAEPRAD 135 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|170726903|ref|YP_001760929.1| electron transport complex protein RnfB [Shewanella woodyi ATCC 51908] gi|169812250|gb|ACA86834.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella woodyi ATCC 51908] Length = 189 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGTGKQMHTVITDYCTGCDLCVAPCPVDCI 159 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP 37 M V+T+ C C CV CPVDC + L I P Sbjct: 136 MHTVITDYCTGCDL--CVAPCPVDCI----DMLPITP 166 >gi|90425971|ref|YP_534341.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] gi|90107985|gb|ABD90022.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB18] Length = 192 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C VCP + + I +CI C +C CP AI Sbjct: 67 CRQCEDAPCTMVCPTGSCRQANGQIEIVEQQCIGCKLCVMVCPFGAI 113 >gi|270296900|ref|ZP_06203099.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272887|gb|EFA18750.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 300 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQNTI 265 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + ++C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEEKCTACGACAKACPKSIIE 189 >gi|255728045|ref|XP_002548948.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240133264|gb|EER32820.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 231 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 130 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 186 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + E Sbjct: 111 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEE 153 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 171 CIYCGY--CQESCPVDAIVETPNVEY 194 >gi|225414543|ref|ZP_03761732.1| hypothetical protein CLOSTASPAR_05766 [Clostridium asparagiforme DSM 15981] gi|225041922|gb|EEG52168.1| hypothetical protein CLOSTASPAR_05766 [Clostridium asparagiforme DSM 15981] Length = 367 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V E C+ C C + C + +I +C+ CG C CP+DA+ Sbjct: 189 PFVNQELCVGCG--SCKKNCAHGAITIEDRKASIDVSKCVGCGRCIGACPLDAV 240 >gi|254173144|ref|ZP_04879817.1| oxidoreductase iron-sulfur protein [Thermococcus sp. AM4] gi|214032553|gb|EEB73382.1| oxidoreductase iron-sulfur protein [Thermococcus sp. AM4] Length = 165 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 + V NC C+ C+ VCP + E+ P +CI C +C CP K D E Sbjct: 40 FTVPFNCRHCEKAPCLNVCPTGALFRDEDGAVAFDPLKCIGCLMCAVACPFGIPKLDEE 98 >gi|157363272|ref|YP_001470039.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermotoga lettingae TMO] gi|157313876|gb|ABV32975.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotoga lettingae TMO] Length = 356 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V +E C+ C C CPV+ F AI+ D CI CG C C A+ P + Sbjct: 189 VASEKCVAC--RMCERNCPVNAITV-SKFAAINYDVCIGCGQCIAMCNYGAMVPKWDSSS 245 Query: 64 ELWLKINSEY 73 E+ K +EY Sbjct: 246 EILSKKMAEY 255 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 E+ + ++C+ C +CE CPV+AI + + IN Sbjct: 184 ESKPVVASEKCVACRMCERNCPVNAI------TVSKFAAIN 218 >gi|83590477|ref|YP_430486.1| aldo/keto reductase [Moorella thermoacetica ATCC 39073] gi|83573391|gb|ABC19943.1| Aldo/keto reductase [Moorella thermoacetica ATCC 39073] Length = 315 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 + E C C +CV CP E + P+ CI CG C C Sbjct: 264 IEEWCQGCG--NCVRRCPQGALEVIEGRAVVDPERCILCGYCAGAC 307 >gi|329955029|ref|ZP_08296010.1| ferredoxin [Bacteroides clarus YIT 12056] gi|328526319|gb|EGF53334.1| ferredoxin [Bacteroides clarus YIT 12056] Length = 321 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEVCPQGTI 265 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVVACQFDAIHMNPETGLPEVDEAKCTACGACAKACPRSIIE 189 >gi|328952559|ref|YP_004369893.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452883|gb|AEB08712.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 1003 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 2 TYVVTENCILCKHTDCVEVCP--VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV + C C CV+ CP V E +N I+ C CG C ECP I+ Sbjct: 933 AYVEPDRCAACLV--CVKTCPFGVPRINE-DNVSEINTALCQGCGTCASECPAKVIQLAH 989 Query: 60 EPGLELWLKINSEY 73 + I + + Sbjct: 990 YEDEKFKANIMASF 1003 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 21/75 (28%), Gaps = 20/75 (26%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL------------------AIHPDECIDCGVCEPEC 50 C C C +VCPV E L AI CI CG+C C Sbjct: 113 CTGCGD--CRKVCPVRAVNEFNAGLDLREATYIRYPQAVPLAFAIDRQVCIGCGLCGQVC 170 Query: 51 PVDAIKPDTEPGLEL 65 AI Sbjct: 171 LAGAINYLDTARQRE 185 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 + P +C CG C CPV A+ Sbjct: 107 YLDPVKCTGCGDCRKVCPVRAV 128 >gi|315505893|ref|YP_004084780.1| formate dehydrogenase beta subunit [Micromonospora sp. L5] gi|315412512|gb|ADU10629.1| formate dehydrogenase beta subunit [Micromonospora sp. L5] Length = 347 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 167 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCISACPYGVI 217 >gi|257791430|ref|YP_003182036.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317490572|ref|ZP_07949047.1| formate dehydrogenase [Eggerthella sp. 1_3_56FAA] gi|325831451|ref|ZP_08164705.1| putative formate dehydrogenase, beta subunit [Eggerthella sp. HGA1] gi|257475327|gb|ACV55647.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316910321|gb|EFV31955.1| formate dehydrogenase [Eggerthella sp. 1_3_56FAA] gi|325486705|gb|EGC89153.1| putative formate dehydrogenase, beta subunit [Eggerthella sp. HGA1] Length = 307 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +C C C +CP E F+++ +CI C C CP D + Sbjct: 78 SCQHCTDAPCATICPGGALKKDEATGFVSVDESKCIGCRYCSTACPFDVPQY 129 >gi|257790280|ref|YP_003180886.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|325830177|ref|ZP_08163634.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474177|gb|ACV54497.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|325487644|gb|EGC90082.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 206 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C++ +CV+VCP ++ E+ I +CI C C CP + E Sbjct: 59 YFLNVQCQHCENPECVKVCPTGASHKTEDGTVQIDKSKCIGCQFCAMSCPYGVRYLNEEE 118 >gi|255527518|ref|ZP_05394386.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|255508788|gb|EET85160.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] Length = 195 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELW 66 C C+ C + CPVD ++ + +CI C C CP+ AI P+ + G ++ Sbjct: 60 CRQCEDALCAKACPVDAISTKNGYVQVEEGKCIGCKTCTVACPIGAIDMIPEFKDGKRVF 119 Query: 67 ---LKINSEYATQ 76 +K+N E ++Q Sbjct: 120 QAKIKVNDENSSQ 132 >gi|295107121|emb|CBL04664.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 253 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPG 62 E+C C+ C+ CPV Y E A + D CI CG+C CP + D+E G Sbjct: 150 EHCKQCEDPACMNYCPVHAIYADEKSGARKVDADRCIGCGMCSQACPWNMPVVDSETG 207 >gi|281356261|ref|ZP_06242754.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] gi|281317630|gb|EFB01651.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] Length = 491 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 4/57 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C+ C CV CP C + I + C+ C C CPV AI Sbjct: 215 EQCVKCG--KCVRSCPSGCIALAKG--EIDNERCVRCMNCFSACPVGAIHYGHPAAA 267 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 9/57 (15%) Query: 5 VTENCILCKHT----DCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPV 52 + C+ C E CP + I + CI CG CE CPV Sbjct: 392 IPPLCVAVADGTDCGACAEHCPTGALRMEPDSRGIRIPKLTSELCIGCGSCEYACPV 448 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 17 CVEVCPVD-----CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C VCPV G L + ++C+ CG C CP I Sbjct: 189 CTAVCPVGTLLGLAAKSGWFRLTLDKEQCVKCGKCVRSCPSGCI 232 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 15/60 (25%) Query: 16 DCVEVCPVDCFYE----GENFLAI-----HPDECI------DCGVCEPECPVDAIKPDTE 60 +C VCP + I P C+ DCG C CP A++ + + Sbjct: 363 NCGRVCPTGAIVPMALPDKRRCRIGLAEYIPPLCVAVADGTDCGACAEHCPTGALRMEPD 422 >gi|302867706|ref|YP_003836343.1| formate dehydrogenase subunit beta [Micromonospora aurantiaca ATCC 27029] gi|302570565|gb|ADL46767.1| formate dehydrogenase beta subunit [Micromonospora aurantiaca ATCC 27029] Length = 347 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 167 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCISACPYGVI 217 >gi|227503750|ref|ZP_03933799.1| possible formate dehydrogenase beta subunit [Corynebacterium striatum ATCC 6940] gi|227199574|gb|EEI79622.1| possible formate dehydrogenase beta subunit [Corynebacterium striatum ATCC 6940] Length = 352 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ C C + C++VCP + E + + D C CG C CP I+ + G Sbjct: 122 SDVCKHCTNAGCLDVCPTGALFRSEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGG 179 >gi|261856152|ref|YP_003263435.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothiobacillus neapolitanus c2] gi|261836621|gb|ACX96388.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halothiobacillus neapolitanus c2] Length = 81 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP +G I P+ C +C C CPVD Sbjct: 1 MSLLITDECINCDV--CEPECPNGAISQGPEIYVIDPNLCTECVGHYDTPQCVEVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P E ++ ++Y Sbjct: 59 I-PLDPDNRETHDELLAKY 76 >gi|218701203|ref|YP_002408832.1| electron transport protein HydN [Escherichia coli IAI39] gi|218371189|emb|CAR19020.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Escherichia coli IAI39] Length = 175 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C++ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCENAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|167744330|ref|ZP_02417104.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei 14] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 125 >gi|39995180|ref|NP_951131.1| oxidoreductase, iron-sulfur cluster-binding subunit [Geobacter sulfurreducens PCA] gi|39981942|gb|AAR33404.1| oxidoreductase, iron-sulfur cluster-binding subunit [Geobacter sulfurreducens PCA] gi|298504185|gb|ADI82908.1| oxidoreductase, iron-sulfur cluster-binding subunit [Geobacter sulfurreducens KN400] Length = 257 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + V + C C + CV+VCPV Y+ + + + CI CG C CP Sbjct: 123 AFFVPKLCNQCDNPPCVQVCPVGATYKTVDGVVLVDRSWCIGCGYCIMGCPYG 175 >gi|11466187|ref|NP_066510.1| NADH dehydrogenase subunit 8 [Naegleria gruberi] gi|10444222|gb|AAG17788.1|AF288092_13 NADH dehydrogenase subunit 8 [Naegleria gruberi] Length = 159 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP G I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEVVCPALAITIDSAQQLNGSRQTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 + CI C +CE CP AI D+ Sbjct: 58 ERCIACKLCEVVCPALAITIDS 79 >gi|296104389|ref|YP_003614535.1| electron transport protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058848|gb|ADF63586.1| electron transport protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 186 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + CI C C CP A++ P Sbjct: 63 CRQCEDAPCANVCPNGAIKREKGFVHVMQARCIGCKTCVVACPYGAMEVVVRP 115 >gi|218779702|ref|YP_002431020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761086|gb|ACL03552.1| Periplasmic formate dehydrogenase FdhABC, beta subunit (iron-sulfur subunit) [Desulfatibacillum alkenivorans AK-01] Length = 263 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C CV CPV + CI C C+ CP +A + + Sbjct: 74 CNHCIEPACVTACPVGALTKTAEGPVHYDESRCIGCRYCQVVCPFNAPRFEWNDP 128 >gi|160942428|ref|ZP_02089735.1| hypothetical protein CLOBOL_07312 [Clostridium bolteae ATCC BAA-613] gi|158434680|gb|EDP12447.1| hypothetical protein CLOBOL_07312 [Clostridium bolteae ATCC BAA-613] Length = 624 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 2 TYVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY++ E C C + C + CP E ++ I +CI CG C CP A+ Sbjct: 567 TYIIDEETCRGC--SKCAKGCPAGAIAGELKHVFTIRQQQCIKCGACAEACPFGAVH 621 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 11/29 (37%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 I + C C C CP AI + + Sbjct: 568 YIIDEETCRGCSKCAKGCPAGAIAGELKH 596 >gi|118472264|ref|YP_886216.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Mycobacterium smegmatis str. MC2 155] gi|118173551|gb|ABK74447.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium smegmatis str. MC2 155] Length = 304 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + + D C CG C CP I+ Sbjct: 124 SDVCKHCTHAGCLDVCPTGALFRTEFSTVVVQQDICNGCGYCVSGCPYGVIE 175 >gi|110598040|ref|ZP_01386319.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] gi|110340299|gb|EAT58793.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chlorobium ferrooxidans DSM 13031] Length = 62 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +TE C C C CPV+ G++ I C+DC C CPVD Sbjct: 1 MAHRITETCTYCG--ACEPECPVNAITAGDDIYIIDETTCVDCIGFHDEAACVQVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|55378121|ref|YP_135971.1| formate dehydrogenase-O iron-sulfur subunit [Haloarcula marismortui ATCC 43049] gi|55230846|gb|AAV46265.1| formate dehydrogenase-O iron-sulfur subunit [Haloarcula marismortui ATCC 43049] Length = 220 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 V C C + CV VCP D EN + D CI C C CP A + E Sbjct: 85 VPMQCYHCSNAPCVSVCPTDSLISKENGFVRVRDDLCIGCQYCLSACPFGAPQFPDEDS 143 >gi|119776035|ref|YP_928775.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Shewanella amazonensis SB2B] gi|119768535|gb|ABM01106.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Shewanella amazonensis SB2B] Length = 230 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C+ CV VCP + +A++ D C+ C C CP I P+T Sbjct: 98 SCQHCEAAPCVRVCPTGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETRTAD 157 Query: 64 E 64 + Sbjct: 158 K 158 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 24/66 (36%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG----------VCEP 48 V ++ C+ C++ C+ CP IHP D+C C C Sbjct: 127 VNSDRCVGCQY--CIAACPYQV-------RYIHPETRTADKCDFCQKSRLAQGLQPACVE 177 Query: 49 ECPVDA 54 CP A Sbjct: 178 ACPTKA 183 >gi|67643798|ref|ZP_00442541.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei GB8 horse 4] gi|121599061|ref|YP_992363.1| ferredoxin [Burkholderia mallei SAVP1] gi|124385577|ref|YP_001026832.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126451277|ref|YP_001079881.1| ferredoxin [Burkholderia mallei NCTC 10247] gi|126453295|ref|YP_001065463.1| ferredoxin [Burkholderia pseudomallei 1106a] gi|166999900|ref|ZP_02265729.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei PRL-20] gi|242316966|ref|ZP_04815982.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 1106b] gi|254175604|ref|ZP_04882264.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei ATCC 10399] gi|254207541|ref|ZP_04913891.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei JHU] gi|254258562|ref|ZP_04949616.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 1710a] gi|254359954|ref|ZP_04976224.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei 2002721280] gi|121227871|gb|ABM50389.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei SAVP1] gi|124293597|gb|ABN02866.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei NCTC 10229] gi|126226937|gb|ABN90477.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 1106a] gi|126244147|gb|ABO07240.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei NCTC 10247] gi|147751435|gb|EDK58502.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei JHU] gi|148029194|gb|EDK87099.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei 2002721280] gi|160696648|gb|EDP86618.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei ATCC 10399] gi|238525236|gb|EEP88664.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei GB8 horse 4] gi|242140205|gb|EES26607.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 1106b] gi|243064025|gb|EES46211.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia mallei PRL-20] gi|254217251|gb|EET06635.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 1710a] Length = 290 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|322613949|gb|EFY10885.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620318|gb|EFY17186.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625323|gb|EFY22150.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630010|gb|EFY26783.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634200|gb|EFY30935.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635899|gb|EFY32608.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643073|gb|EFY39648.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644596|gb|EFY41132.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650838|gb|EFY47230.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652998|gb|EFY49333.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659961|gb|EFY56201.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663294|gb|EFY59498.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668780|gb|EFY64933.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674417|gb|EFY70510.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678375|gb|EFY74436.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680881|gb|EFY76915.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687183|gb|EFY83156.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192142|gb|EFZ77375.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200646|gb|EFZ85720.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201356|gb|EFZ86422.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206756|gb|EFZ91710.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211814|gb|EFZ96646.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216173|gb|EGA00901.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220396|gb|EGA04850.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226253|gb|EGA10468.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228373|gb|EGA12504.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234194|gb|EGA18282.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237179|gb|EGA21246.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244698|gb|EGA28702.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249179|gb|EGA33097.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250702|gb|EGA34582.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257577|gb|EGA41264.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262286|gb|EGA45847.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266159|gb|EGA49650.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268794|gb|EGA52252.1| protein AegA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 157 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|315917685|ref|ZP_07913925.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691560|gb|EFS28395.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 594 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 Y +T+ C+ C T C CPV I E CI CG+C C AI Sbjct: 540 YRITDKCVGC--TLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAI 591 >gi|313157190|gb|EFR56620.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 302 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 7/73 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C CV +CP G+ L P CI C C C A +T Sbjct: 235 CTQCG--RCVALCPTQAIARGDE-LHTDPARCIRCCACVKGCAFGARTFETPFAA----V 287 Query: 69 INSEYATQWPNIT 81 ++ +A + P +T Sbjct: 288 LSRNFARRKPPVT 300 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 9/25 (36%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 C CG C CP AI E Sbjct: 231 DAARCTQCGRCVALCPTQAIARGDE 255 >gi|302879333|ref|YP_003847897.1| NADH-quinone oxidoreductase, chain I [Gallionella capsiferriformans ES-2] gi|302582122|gb|ADL56133.1| NADH-quinone oxidoreductase, chain I [Gallionella capsiferriformans ES-2] Length = 162 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CPVDAI Sbjct: 61 ERCIGCKL--CEAVCPAMAIKIAVAEREDGTRRTTQYDIDLTKCIFCGFCEESCPVDAI 117 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 38 DECIDCGVCEPECPVDAIK 56 + CI C +CE CP AIK Sbjct: 61 ERCIGCKLCEAVCPAMAIK 79 >gi|227824514|ref|ZP_03989346.1| 4Fe-4S ferredoxin [Acidaminococcus sp. D21] gi|226905013|gb|EEH90931.1| 4Fe-4S ferredoxin [Acidaminococcus sp. D21] Length = 57 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M + + + CI C C CPV E + CIDC C CPV AI + Sbjct: 1 MAHKIDQDACIGCG--SCAGTCPVGAISEDNGKYKVDEASCIDCDACTGACPVGAIAAE 57 >gi|213024433|ref|ZP_03338880.1| hydrogen sulfide production: iron- sulfur subunit; electron transfer [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 171 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 52 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 97 >gi|170733685|ref|YP_001765632.1| ferredoxin [Burkholderia cenocepacia MC0-3] gi|169816927|gb|ACA91510.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia cenocepacia MC0-3] Length = 306 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD-- 58 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 80 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCIPPCPVDCIAMLPV 137 Query: 59 --TEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 138 TGDRTGWDAWSQEQADAARE 157 >gi|204928671|ref|ZP_03219870.1| protein AegA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322104|gb|EDZ07302.1| protein AegA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 157 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|167574102|ref|ZP_02366976.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia oklahomensis C6786] Length = 248 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|218778074|ref|YP_002429392.1| dihydropyrimidine dehydrogenase (NADP(+)) [Desulfatibacillum alkenivorans AK-01] gi|218759458|gb|ACL01924.1| Dihydropyrimidine dehydrogenase (NADP(+)) [Desulfatibacillum alkenivorans AK-01] Length = 695 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 10 ILC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + C DCV+ C D G + ++ D C+ CG CE CP ++ Sbjct: 135 VGCLGLGDCVKACLFDAISIGPDGYPVVNADNCVGCGACERACPKGVLE 183 >gi|51894426|ref|YP_077117.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] gi|51858115|dbj|BAD42273.1| electron transport protein [Symbiobacterium thermophilum IAM 14863] Length = 199 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C CPV + + + + CI C C CP A Sbjct: 61 CRHCEDAPCANACPVGAIVRQDGVVLVKQERCIGCKTCVLACPFGA 106 >gi|16762644|ref|NP_458261.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144131|ref|NP_807473.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415559|ref|YP_152634.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197250554|ref|YP_002148595.1| protein AegA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197364486|ref|YP_002144123.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213052803|ref|ZP_03345681.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418298|ref|ZP_03351364.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428116|ref|ZP_03360866.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582428|ref|ZP_03364254.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615802|ref|ZP_03371628.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213865474|ref|ZP_03387593.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585465|ref|YP_002639264.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289828329|ref|ZP_06546254.1| protein AegA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25285317|pir||AF0979 probable electron-transport protein STY4132 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504950|emb|CAD07962.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139768|gb|AAO71333.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129816|gb|AAV79322.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095963|emb|CAR61547.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214257|gb|ACH51654.1| protein AegA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|224469993|gb|ACN47823.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 157 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|329961451|ref|ZP_08299556.1| ferredoxin [Bacteroides fluxus YIT 12057] gi|328531799|gb|EGF58625.1| ferredoxin [Bacteroides fluxus YIT 12057] Length = 315 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQNTI 265 Score = 41.3 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACAKACPKNIIE 189 >gi|308051326|ref|YP_003914892.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307633516|gb|ADN77818.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 205 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y V+ C C + CV+ CP + + + + C+ C C CP DA + D Sbjct: 63 SYYVSIGCNHCSNPVCVKACPTGAMHKRRSDGLVHVDQGICVGCEACARACPYDAPQIDK 122 Query: 60 EPG 62 + G Sbjct: 123 DRG 125 >gi|255526305|ref|ZP_05393221.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296185227|ref|ZP_06853637.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255510018|gb|EET86342.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296050061|gb|EFG89485.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 417 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + E+CI C C + CP+D + C+ CG+C CP +I Sbjct: 287 FIEESCIGCG--KCAKACPIDAIKIDPVTKKARTDENICLGCGICVRNCPKKSIYLKHRE 344 Query: 62 GL 63 Sbjct: 345 KQ 346 >gi|239904991|ref|YP_002951730.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] gi|239794855|dbj|BAH73844.1| iron-sulfur binding protein [Desulfovibrio magneticus RS-1] Length = 583 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y + C C C+ CPV + P+ CI CG C CP A Sbjct: 8 YTIEAECQDC--YRCLRQCPVKAIQVENGRATVVPELCIACGQCVAACPSQA 57 >gi|254477029|ref|ZP_05090415.1| iron-sulfur cluster-binding protein [Ruegeria sp. R11] gi|214031272|gb|EEB72107.1| iron-sulfur cluster-binding protein [Ruegeria sp. R11] Length = 237 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ CI CG+C CP A + D G Sbjct: 60 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESNCIGCGLCAWSCPYGARELDLAEG 116 >gi|153869109|ref|ZP_01998797.1| DSMO reductase subunit B [Beggiatoa sp. PS] gi|152074346|gb|EDN71210.1| DSMO reductase subunit B [Beggiatoa sp. PS] Length = 244 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +C+ C+ CV VCP Y E + + + D+CI C C CP A + D Sbjct: 72 SCLHCEEPPCVPVCPTGASYKREADGIVLVDYDKCIGCKYCSWACPYGAREYD 124 >gi|145255608|ref|XP_001399017.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS 513.88] gi|134084609|emb|CAK97485.1| unnamed protein product [Aspergillus niger] Length = 224 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 123 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGYCQESCPVDAIV 180 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 + N+EYAT+ + K++ L + K + Sbjct: 181 ETS----------NAEYATETREELLYNKEKLLANGDKWE 210 >gi|317470826|ref|ZP_07930207.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316901653|gb|EFV23586.1| 4Fe-4S binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 416 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 6 TENCILCK-HTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 TE+C C C C D E + L+I PD+C CGVC C Sbjct: 52 TESCESCAYDRACKNSCIFDAIEEVDGKLSIDPDKCSGCGVCIESC 97 >gi|239908987|ref|YP_002955729.1| putative electron transport protein [Desulfovibrio magneticus RS-1] gi|239798854|dbj|BAH77843.1| putative electron transport protein [Desulfovibrio magneticus RS-1] Length = 198 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 19/47 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + + P CI C C CPV A Sbjct: 62 ACRHCEAAPCAAVCPTAAVRCDASGVVVEPARCIGCKACLAVCPVGA 108 >gi|183599629|ref|ZP_02961122.1| hypothetical protein PROSTU_03116 [Providencia stuartii ATCC 25827] gi|188021881|gb|EDU59921.1| hypothetical protein PROSTU_03116 [Providencia stuartii ATCC 25827] Length = 180 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + W Sbjct: 116 LTPDFEMGEW 125 >gi|163757590|ref|ZP_02164679.1| iron-sulfur cluster-binding protein [Hoeflea phototrophica DFL-43] gi|162285092|gb|EDQ35374.1| iron-sulfur cluster-binding protein [Hoeflea phototrophica DFL-43] Length = 248 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C CV VCP + E+ + + D CI CG+C CP A + D Sbjct: 81 SCLHCDDAPCVTVCPTGASHKRSEDGIVLVTEDMCIGCGLCAWACPYGAREMD 133 >gi|288940992|ref|YP_003443232.1| DsrO protein [Allochromatium vinosum DSM 180] gi|10120478|gb|AAG13084.1| DsrO [Allochromatium vinosum DSM 180] gi|288896364|gb|ADC62200.1| DsrO [Allochromatium vinosum DSM 180] Length = 268 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+H CV+VCP F + + + CI C C CP A Sbjct: 130 CQHCEHPPCVDVCPTGASFKRADGIVMVDRHLCIGCRYCMMACPYKA 176 >gi|325122853|gb|ADY82376.1| ferredoxin [Acinetobacter calcoaceticus PHEA-2] Length = 87 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 14/82 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITNDCINCD--MCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPDT------EPGLELWLKIN 70 IKPD E LE + +N Sbjct: 59 IKPDHAHIENKEQLLEKFKDLN 80 >gi|309781131|ref|ZP_07675869.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia sp. 5_7_47FAA] gi|308920197|gb|EFP65856.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia sp. 5_7_47FAA] Length = 276 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP----DTEP 61 E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 92 ERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCIDMIPVTGERT 149 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 150 GWDAWSQQQADVAR 163 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P + + I P+ CI C +C CPVDAI Sbjct: 76 PSNGIEQPRAIAVIDPERCIGCTLCIQACPVDAI 109 >gi|297526113|ref|YP_003668137.1| Cobyrinic acid ac-diamide synthase [Staphylothermus hellenicus DSM 12710] gi|297255029|gb|ADI31238.1| Cobyrinic acid ac-diamide synthase [Staphylothermus hellenicus DSM 12710] Length = 295 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + ++ T+ C C C ++C N I P C C C CP +AI Sbjct: 64 LPFIDTKKCTKCGV--CAKICDTGAILMPPNSFPVIFPRLCSGCKACYYACPYNAI 117 >gi|207743646|ref|YP_002260038.1| ferredoxin [4fe-4s] protein [Ralstonia solanacearum IPO1609] gi|206595045|emb|CAQ61972.1| ferredoxin [4fe-4s] protein [Ralstonia solanacearum IPO1609] Length = 265 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 7/90 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP----DTEP 61 E+CI C T C++ CPVD + D C C +C CPVD I Sbjct: 85 EHCIGC--TLCIQACPVDAIVGAPKAMHVVLADWCTGCDLCVAPCPVDCIDMVPVTGERT 142 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAA 91 G + W + ++ A + + A Sbjct: 143 GWDAWSQAQADVARDRYVFHNDRLAREQAE 172 Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 81 VIDPEHCIGCTLCIQACPVDAI 102 >gi|168181019|ref|ZP_02615683.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] gi|226951006|ref|YP_002806097.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] gi|182668050|gb|EDT80029.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916] gi|226842509|gb|ACO85175.1| [Fe] hydrogenase [Clostridium botulinum A2 str. Kyoto] Length = 449 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 8 NC-ILCKHTD----CVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK D C CP D + N I ++C DCG C CP +I Sbjct: 81 DCSMDCKKEDGKTFCQNSCPFDAILINKKTNSTYIDTEKCTDCGFCVEACPTGSI 135 >gi|167567033|ref|ZP_02359949.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia oklahomensis EO147] Length = 252 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|160890331|ref|ZP_02071334.1| hypothetical protein BACUNI_02772 [Bacteroides uniformis ATCC 8492] gi|156860063|gb|EDO53494.1| hypothetical protein BACUNI_02772 [Bacteroides uniformis ATCC 8492] Length = 300 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEACPQNTI 265 Score = 41.7 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + ++C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEEKCTACGACAKACPKSIIE 189 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 21/74 (28%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAI-----HPDE-----------CIDCG 44 V E C C C + CP +G+ I + D+ CI CG Sbjct: 168 VDEEKCTACG--ACAKACPKSIIEIRPQGKKSRRIYVQCVNKDKGAVARKACTVACIGCG 225 Query: 45 VCEPECPVDAIKPD 58 C CP +AI + Sbjct: 226 KCVKVCPFEAITLE 239 >gi|146341105|ref|YP_001206153.1| NADH dehydrogenase subunit I [Bradyrhizobium sp. ORS278] gi|156632703|sp|A4YVK2|NUOI_BRASO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|146193911|emb|CAL77928.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I) (NDH-1, chain I) [Bradyrhizobium sp. ORS278] Length = 162 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|121533863|ref|ZP_01665689.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307374|gb|EAX48290.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 271 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 + C C CV VCP F + + + C CG C CP D Sbjct: 106 QLCNHCSEPACVSVCPTGATFKRDDGIVVVDDTICWGCGYCINACPYD 153 >gi|317177092|dbj|BAJ54881.1| ferredoxin [Helicobacter pylori F16] Length = 83 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|299138041|ref|ZP_07031221.1| DMSO reductase anchor subunit (DmsC) [Acidobacterium sp. MP5ACTX8] gi|298599971|gb|EFI56129.1| DMSO reductase anchor subunit (DmsC) [Acidobacterium sp. MP5ACTX8] Length = 532 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 C C +C++ CPVD + + + +H D CI C C CP + + E G Sbjct: 105 CNHCLSAECIKGCPVDAYTKDSITGIVLHSADACIGCQYCVWNCPYSVPQFNPERG 160 >gi|296242973|ref|YP_003650460.1| ABC transporter-like protein [Thermosphaera aggregans DSM 11486] gi|296095557|gb|ADG91508.1| ABC transporter related protein [Thermosphaera aggregans DSM 11486] Length = 602 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%) Query: 17 CVEVCPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ CPV+ E + I D+CI CG+C +CP +AI P Sbjct: 21 CIRFCPVNRTKKVKAIDLSEDKTHSVIFEDKCIGCGICVKKCPFNAISIVNVPDE 75 >gi|261823786|ref|YP_003261892.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pectobacterium wasabiae WPP163] gi|261607799|gb|ACX90285.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pectobacterium wasabiae WPP163] Length = 169 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D + + + CI C C CP AI Sbjct: 57 CRQCENAPCASVCPNDALVRDRDSIQVIQSRCIGCKSCVVACPFGAI 103 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 29/88 (32%), Gaps = 14/88 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCG---VCEPECPV 52 V+ CI CK CV CP E D C+D C CP Sbjct: 83 VIQSRCIGCK--SCVVACPFGAINVVTKASNDESTQSEVHKCDLCVDVAPSPSCVSVCPT 140 Query: 53 DAIKPDTEPGLELW-LKINSEYATQWPN 79 A++ T L L+ A WPN Sbjct: 141 SALRLVTADELRKQTLEKQQRSALGWPN 168 >gi|254481239|ref|ZP_05094484.1| electron transport complex, RnfABCDGE type, B subunit subfamily [marine gamma proteobacterium HTCC2148] gi|214038402|gb|EEB79064.1| electron transport complex, RnfABCDGE type, B subunit subfamily [marine gamma proteobacterium HTCC2148] Length = 203 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 114 AYIREDECIGC--TKCIQACPVDAILGAAKHMHTVIVSECTGCDLCVEPCPVDCI 166 >gi|146303598|ref|YP_001190914.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701848|gb|ABP94990.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 276 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + CVEVCPV F ++ + + +ECI C CP Sbjct: 90 YNIPINCFHCMNAPCVEVCPVGATFKRTQDGIVLVDYEECIGTKYCIYACPYG 142 >gi|66046433|ref|YP_236274.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae B728a] gi|81308095|sp|Q4ZRI6|NUOI_PSEU2 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|63257140|gb|AAY38236.1| NADH-quinone oxidoreductase, chain I [Pseudomonas syringae pv. syringae B728a] gi|330972914|gb|EGH72980.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aceris str. M302273PT] Length = 182 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|323486564|ref|ZP_08091886.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14163] gi|323694298|ref|ZP_08108472.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14673] gi|323400157|gb|EGA92533.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14163] gi|323501644|gb|EGB17532.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium symbiosum WAL-14673] Length = 454 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +NC CK V+ CPV + + I +EC +CG C +CP DA+ +T+ Sbjct: 308 ADNCKGCKSCVVVDACPVSAAAVEDGTVRIPEEECNNCGRCTSKCPFDAVTEETK 362 >gi|189466149|ref|ZP_03014934.1| hypothetical protein BACINT_02519 [Bacteroides intestinalis DSM 17393] gi|189434413|gb|EDV03398.1| hypothetical protein BACINT_02519 [Bacteroides intestinalis DSM 17393] Length = 324 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T CI C CV+VCP + N I P++C C CE CP + I Sbjct: 218 TVACIGCG--KCVKVCPFEAITLENNLAYIDPNKCKSCRKCEEVCPQNTI 265 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CVE C D + + +C CG C CP + I+ Sbjct: 142 CLGCGD--CVEACQFDAIHMNPETGLPEVDEAKCTACGACAKACPKNIIE 189 >gi|89108511|ref|AP_002291.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli str. K-12 substr. W3110] gi|170081331|ref|YP_001730651.1| 4Fe-4S ferridoxin-type protein [Escherichia coli str. K-12 substr. DH10B] gi|226524717|ref|NP_416186.4| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli str. K-12 substr. MG1655] gi|253773372|ref|YP_003036203.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161732|ref|YP_003044840.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli B str. REL606] gi|331642267|ref|ZP_08343402.1| putative oxidoreductase Fe-S subunit [Escherichia coli H736] gi|331668353|ref|ZP_08369201.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA271] gi|269849742|sp|P77375|YDHX_ECOLI RecName: Full=Uncharacterized ferredoxin-like protein ydhX; Flags: Precursor gi|85675068|dbj|BAA15443.2| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli str. K12 substr. W3110] gi|169889166|gb|ACB02873.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli str. K-12 substr. DH10B] gi|226510944|gb|AAC74741.4| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli str. K-12 substr. MG1655] gi|253324416|gb|ACT29018.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973633|gb|ACT39304.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli B str. REL606] gi|253977828|gb|ACT43498.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli BL21(DE3)] gi|260449206|gb|ACX39628.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|309701896|emb|CBJ01208.1| putative oxidoreductase Fe-S subunit [Escherichia coli ETEC H10407] gi|315136312|dbj|BAJ43471.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli DH1] gi|331039065|gb|EGI11285.1| putative oxidoreductase Fe-S subunit [Escherichia coli H736] gi|331063547|gb|EGI35458.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA271] Length = 222 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|255318323|ref|ZP_05359558.1| 4Fe-4S binding domain protein [Acinetobacter radioresistens SK82] gi|262379067|ref|ZP_06072223.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter radioresistens SH164] gi|255304635|gb|EET83817.1| 4Fe-4S binding domain protein [Acinetobacter radioresistens SK82] gi|262298524|gb|EEY86437.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter radioresistens SH164] Length = 180 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L +++ + Y + I+ + Sbjct: 116 LTPDFELGEYVRQDLVYEKEHLLISGPGKYPD 147 >gi|218550855|ref|YP_002384646.1| hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia fergusonii ATCC 35469] gi|218358396|emb|CAQ91043.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia fergusonii ATCC 35469] Length = 197 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C C+ C VCPV + + CI C C CP A++ + Sbjct: 91 AFTTAVACHQCEDAPCANVCPVQAIRRERGHIFVEQSRCIGCKSCMLACPFGAMRVVAQE 150 Query: 62 GLELWLKIN 70 +K + Sbjct: 151 SQVQAIKCD 159 >gi|167626343|ref|YP_001676843.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668775|ref|ZP_04756353.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877306|ref|ZP_05250016.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596344|gb|ABZ86342.1| 4Fe-4S ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843327|gb|EET21741.1| ferredoxin [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 81 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T++CI C C CP + +GE + I+PD+C +C C CP+ Sbjct: 1 MALLITDDCINCD--ICEPECPNEAISQGEEYYEINPDKCTECVGHFEESQCTKVCPIRC 58 Query: 55 IKPD 58 I D Sbjct: 59 IITD 62 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 D+CI+C +CEPECP +AI E + +IN Sbjct: 7 DDCINCDICEPECPNEAISQG-----EEYYEIN 34 >gi|198243858|ref|YP_002216546.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938374|gb|ACH75707.1| protein AegA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 653 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGVIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|108562704|ref|YP_627020.1| ferrodoxin [Helicobacter pylori HPAG1] gi|207108360|ref|ZP_03242522.1| ferrodoxin [Helicobacter pylori HPKX_438_CA4C1] gi|107836477|gb|ABF84346.1| ferrodoxin [Helicobacter pylori HPAG1] gi|261839133|gb|ACX98898.1| ferrodoxin [Helicobacter pylori 52] gi|308063139|gb|ADO05026.1| ferrodoxin [Helicobacter pylori Sat464] gi|317181620|dbj|BAJ59404.1| ferredoxin [Helicobacter pylori F57] Length = 83 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|77917781|ref|YP_355596.1| hypothetical protein Pcar_0165 [Pelobacter carbinolicus DSM 2380] gi|77543864|gb|ABA87426.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 227 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T+ CI C C C + E I C CG C CP AI+ Sbjct: 170 ITDACISCG--KCQAGCSFKAISQHEGKFVIDHTRCDACGDCYMVCPAGAIE 219 >gi|34498747|ref|NP_902962.1| ferredoxin [Chromobacterium violaceum ATCC 12472] gi|34104598|gb|AAQ60956.1| Electron transport complex protein [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 7/97 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI----KPDTEP 61 ++CI C T C++ CPVD + + DEC C +C CPVD I D + Sbjct: 84 DSCIGC--TLCIQACPVDAIVGAAKQMHTVIADECTGCELCLAPCPVDCIDLVPVADPDD 141 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQ 98 G + + A + + ++ +A K + + Sbjct: 142 GKRERVMARAAQARKRFDARQARKDRDAADKARRLAE 178 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I D CI C +C CPVDAI Sbjct: 80 VIREDSCIGCTLCIQACPVDAI 101 >gi|325929561|ref|ZP_08190675.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas perforans 91-118] gi|325540071|gb|EGD11699.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas perforans 91-118] Length = 142 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 84 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 137 >gi|269469176|gb|EEZ80718.1| NADH dehydrogenase I chain I [uncultured SUP05 cluster bacterium] Length = 173 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP + I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPANAITIESEMRDDGTRRTTQYDIDLFKCIFCGFCEEACPVDAI 118 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP +AI ++E Sbjct: 62 ERCIACKLCEAVCPANAITIESE 84 >gi|240103196|ref|YP_002959505.1| putative ATPase RIL [Thermococcus gammatolerans EJ3] gi|239910750|gb|ACS33641.1| Predicted ATPase, RNase L inhibitor-like protein [Thermococcus gammatolerans EJ3] Length = 590 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 10 DKCNPNKCGHFLCERVCPVNRM--GGEAIIIDEENYRPIIQEASCTGCGICVHKCPFNAI 67 Query: 56 KPDTEPGL 63 P Sbjct: 68 TIVNLPEQ 75 >gi|225707568|gb|ACO09630.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Osmerus mordax] Length = 210 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 109 ERCIACKLCEAICPAQAITIEAE 131 >gi|207725274|ref|YP_002255670.1| ferredoxin [4fe-4s] protein [Ralstonia solanacearum MolK2] gi|206590508|emb|CAQ37470.1| ferredoxin [4fe-4s] protein [Ralstonia solanacearum MolK2] Length = 265 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP----DTEP 61 E+CI C T C++ CPVD + D C C +C CPVD I Sbjct: 85 EHCIGC--TLCIQACPVDAIVGAPKAMHVVLADWCTGCDLCVAPCPVDCIDMVPVTGERT 142 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 143 GWDAWSQAQADVAR 156 Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I P+ CI C +C CPVDAI Sbjct: 81 VIDPEHCIGCTLCIQACPVDAI 102 >gi|200388401|ref|ZP_03215013.1| protein AegA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605499|gb|EDZ04044.1| protein AegA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 157 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|157964943|ref|YP_001499767.1| NADH dehydrogenase subunit I [Rickettsia massiliae MTU5] gi|157844719|gb|ABV85220.1| NADH dehydrogenase I chain I [Rickettsia massiliae MTU5] Length = 162 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQAACPVDAI 117 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 61 ERCIACKLCEAICPAQAIVIEADERED 87 Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C CPVD EG NF Sbjct: 102 CIYCGL--CQAACPVDAIVEGPNF 123 >gi|157375704|ref|YP_001474304.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318078|gb|ABV37176.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 228 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA---IHPDECIDCGVCEPECP 51 C+ C+ CV CPV+ E+F I P +CI C C CP Sbjct: 102 CLQCEDAPCVAACPVNANKASEDFGFVRDIDPAKCIGCMQCIEACP 147 >gi|320353511|ref|YP_004194850.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122013|gb|ADW17559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 148 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C VCP ++ + + C CG C P CPVDAI D E Sbjct: 54 CLACTSPPCANVCPTGALVPRKDGGVVVKKKLCNRCGACAPACPVDAIFLDPEGE 108 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C C CPVD + P C+ CG+C P CP D ++ + Sbjct: 86 CNRCG--ACAPACPVDAIFLDPEGE---PFLCVHCGLCVPFCPHDCLELAERNEVRPDPS 140 Query: 69 INS 71 N+ Sbjct: 141 RNA 143 >gi|307945104|ref|ZP_07660440.1| iron-sulfur cluster-binding protein [Roseibium sp. TrichSKD4] gi|307770977|gb|EFO30202.1| iron-sulfur cluster-binding protein [Roseibium sp. TrichSKD4] Length = 249 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C+ C CV VCP + E+ + + CI CG+C CP A + D Sbjct: 82 SCLHCDTAPCVTVCPTGASYKRSEDGIVLVDESACIGCGLCAWACPYGARELD 134 >gi|239905934|ref|YP_002952673.1| Fe hydrogenase large subunit [Desulfovibrio magneticus RS-1] gi|239795798|dbj|BAH74787.1| Fe hydrogenase large subunit [Desulfovibrio magneticus RS-1] Length = 421 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C C+ CP Y GE H + CI+CG C CPV AI + Sbjct: 35 CIGCD--SCMGYCPTGAIYGETGEPHKIPHVEACINCGQCLTHCPVSAIYEE 84 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 F+ + +CI C C CP AI +T + Sbjct: 27 FIKVDESKCIGCDSCMGYCPTGAIYGETGEPHK 59 >gi|194292353|ref|YP_002008260.1| benzoyl-CoA dioxygenase component a [Cupriavidus taiwanensis LMG 19424] gi|193226257|emb|CAQ72206.1| Benzoyl-CoA dioxygenase component A [Cupriavidus taiwanensis LMG 19424] Length = 426 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 28/101 (27%), Gaps = 16/101 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C CPV + D+C C C CP +I Sbjct: 17 EICIRCN--TCEATCPVGAITHDSRNYVVDADKCNLCMACISPCPTGSI-----DNWRDM 69 Query: 67 LKINS---EYATQWPNITTKKES------LPSAAKMDGVKQ 98 K+ + E W + P A V + Sbjct: 70 PKLRAYSVEEQLTWDALPEPLSPEQLADLAPGADMQSAVPE 110 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI D+ Sbjct: 14 IDPEICIRCNTCEATCPVGAITHDSR 39 >gi|57234357|ref|YP_181590.1| hydrogenase subunit HymB, putative [Dehalococcoides ethenogenes 195] gi|57224805|gb|AAW39862.1| hydrogenase subunit HymB, putative [Dehalococcoides ethenogenes 195] Length = 640 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 Y+ + C C C CP D G+ + I D+CI CG C CP Sbjct: 563 YIDPDKCKAC--MICARNCPTDAIKGGKGLIHTIEQDKCIKCGACLDTCPA 611 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I PD+C C +C CP DAIK Sbjct: 562 FYIDPDKCKACMICARNCPTDAIK 585 >gi|21242137|ref|NP_641719.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|21107549|gb|AAM36255.1| ferredoxin II [Xanthomonas axonopodis pv. citri str. 306] Length = 168 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 110 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 163 >gi|20093900|ref|NP_613747.1| ferredoxin [Methanopyrus kandleri AV19] gi|19886841|gb|AAM01677.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 192 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 16/73 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--------------ENFLAIHPDECIDCGVCEPECPV 52 E CI C CVEVCP G + + D C+ CG CE CP Sbjct: 79 ERCIRCGL--CVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESACPS 136 Query: 53 DAIKPDTEPGLEL 65 DAI + ++ Sbjct: 137 DAITVEETAEVDE 149 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 7 ENCILCKHTDCVEVCPVD-------CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CILC C + CPV+ E +H + CI CG+C CP AI+ Sbjct: 43 DRCILCG--ACADACPVEGRDGCPPAMEMSEEGPVLHKERCIRCGLCVEVCPTGAIE 97 Score = 40.9 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-DAIKP---DT 59 V ++ C+ C C CP D E + + C+ C VC CPV AIK DT Sbjct: 119 VDSDLCVGCG--KCESACPSDAITV-EETAEVDEERCVLCEVCLEVCPVAGAIKLVPTDT 175 Query: 60 EPGLELWLK 68 + ++ W + Sbjct: 176 DELVKRWKE 184 >gi|296166768|ref|ZP_06849191.1| formate dehydrogenase-O, beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897880|gb|EFG77463.1| formate dehydrogenase-O, beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 339 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 158 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 208 >gi|238910299|ref|ZP_04654136.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 157 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|268593589|ref|ZP_06127810.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Providencia rettgeri DSM 1131] gi|291310806|gb|EFE51259.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Providencia rettgeri DSM 1131] Length = 184 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C C++ C+E CPV+ + + E+ + + +P+ CI C C CP A Sbjct: 56 ACNHCENPACLEACPVEAYTKREDGIVVNNPENCIGCRNCIRSCPYGAP 104 >gi|195940544|ref|ZP_03085926.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O157:H7 str. EC4024] Length = 193 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 21/45 (46%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C++ CV+ CP + + + ++ +CI C C CP Sbjct: 33 CHHCENAPCVQSCPNGAITQHSDSVQVNQQKCIGCKACVVACPFG 77 >gi|187935352|ref|YP_001886203.1| nitroreductase family protein fused to ferredoxin domain [Clostridium botulinum B str. Eklund 17B] gi|187723505|gb|ACD24726.1| nitroreductase family protein [Clostridium botulinum B str. Eklund 17B] Length = 273 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M V E CI CK C+ CPV ++ I + CI CG C CP +A+ Sbjct: 1 MFKVNKEKCISCKQ--CINDCPVSDILLIDSKANIKNEACIKCGHCIAICPTNAV 53 >gi|184200425|ref|YP_001854632.1| putative formate dehydrogenase iron-sulfur subunit [Kocuria rhizophila DC2201] gi|183580655|dbj|BAG29126.1| putative formate dehydrogenase iron-sulfur protein [Kocuria rhizophila DC2201] Length = 404 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP I+ Sbjct: 201 SDVCKHCTHAGCLDVCPTGALFRTEYGTVVVQEDICNGCGTCVAGCPFGVIE 252 >gi|168232507|ref|ZP_02657565.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168818508|ref|ZP_02830508.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194469365|ref|ZP_03075349.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455729|gb|EDX44568.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333269|gb|EDZ20033.1| protein AegA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205344438|gb|EDZ31202.1| protein AegA [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088084|emb|CBY97846.1| Electron transport protein hydN [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 157 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|168027577|ref|XP_001766306.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682520|gb|EDQ68938.1| predicted protein [Physcomitrella patens subsp. patens] Length = 225 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 180 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 124 ERCIACKLCEAVCPAQAITIEAEERED 150 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 165 CIYCGF--CQEACPVDAIVEGPNF 186 >gi|116792080|gb|ABK26223.1| unknown [Picea sitchensis] Length = 224 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 123 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 179 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 123 ERCIACKLCEAICPAQAITIEAEERED 149 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 164 CIYCGF--CQEACPVDAIVEGPNF 185 >gi|163737101|ref|ZP_02144519.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] gi|161389705|gb|EDQ14056.1| iron-sulfur cluster-binding protein [Phaeobacter gallaeciensis BS107] Length = 264 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ CI CG+C CP A + D G Sbjct: 87 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESNCIGCGLCAWSCPYGARELDLAEG 143 >gi|189423538|ref|YP_001950715.1| Fis family transcriptional regulator [Geobacter lovleyi SZ] gi|189419797|gb|ACD94195.1| transcriptional regulator, Fis family [Geobacter lovleyi SZ] Length = 767 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 1 MTYVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++T E C C CV CPV E + I + CI CG C CP A Sbjct: 1 MQPIITYKERCRTC--YSCVRTCPVKAIKVDEGYAEIIYERCIGCGNCL-NCPQKA 53 >gi|52549490|gb|AAU83339.1| coenzyme F420-reducing hydrogenase beta subunit [uncultured archaeon GZfos27E7] Length = 267 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C C E+C VD I D+CI CG C CP +A+ +TE G +W+ N Sbjct: 122 GCG--RCAELCRVDAISIVLGKSVIDSDKCISCGWCIRGCPHEAVI-ETERGYTMWIGGN 178 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G+ L I ++ CG C C VDAI Sbjct: 109 GQGRLDIDEEKFNGCGRCAELCRVDAI 135 >gi|127514172|ref|YP_001095369.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126639467|gb|ABO25110.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 238 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 C C CV VCP + E + + + + CI C C CP D Sbjct: 95 CNNCDRPSCVSVCPTGATFKREQDGIVVVDSELCIGCNYCIQACPYD 141 >gi|331647161|ref|ZP_08348255.1| putative oxidoreductase Fe-S subunit [Escherichia coli M605] gi|331043944|gb|EGI16080.1| putative oxidoreductase Fe-S subunit [Escherichia coli M605] Length = 239 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|289743757|gb|ADD20626.1| NADH-ubiquinone oxidoreductase NDUFS8/23 kDa subunit [Glossina morsitans morsitans] Length = 215 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 114 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 170 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 114 ERCIACKLCEAICPAQAITIEAEERAD 140 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 155 CIYCGF--CQEACPVDAIVEGPNF 176 >gi|270308168|ref|YP_003330226.1| hydrogenase subunit, NADH dehydrogenase subunit E subfamily [Dehalococcoides sp. VS] gi|270154060|gb|ACZ61898.1| hydrogenase subunit, NADH dehydrogenase subunit E subfamily [Dehalococcoides sp. VS] Length = 641 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 Y+ E C C C CP D G+ + I D+CI CG C CP Sbjct: 564 YIDPEKCKAC--MICARNCPTDAIKGGKGLIHTIEQDKCIKCGACLDTCPA 612 Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I P++C C +C CP DAIK Sbjct: 563 FYIDPEKCKACMICARNCPTDAIK 586 >gi|238755292|ref|ZP_04616636.1| Formate hydrogenlyase subunit 2 [Yersinia ruckeri ATCC 29473] gi|238706526|gb|EEP98899.1| Formate hydrogenlyase subunit 2 [Yersinia ruckeri ATCC 29473] Length = 198 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C +VCPV+ N + ++ + C+ C +C CP AI Sbjct: 57 CHQCEDAPCAQVCPVNAITHENNAIHLNENLCVSCKLCGIACPFGAI 103 >gi|171680662|ref|XP_001905276.1| hypothetical protein [Podospora anserina S mat+] gi|170939958|emb|CAP65184.1| unnamed protein product [Podospora anserina S mat+] Length = 220 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 119 ERCIACKL--CEAVCPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 176 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 177 ESP----------NAEYATE 186 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 100 PISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERAD 145 >gi|170683856|ref|YP_001745039.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli SMS-3-5] gi|170521574|gb|ACB19752.1| protein aegA [Escherichia coli SMS-3-5] Length = 644 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 21/57 (36%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C C ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQPDSVQLDEQKCIGCKRCAIACSFGVVEMVDTIAQK 116 >gi|170682806|ref|YP_001743584.1| iron-sulfur cluster-binding protein [Escherichia coli SMS-3-5] gi|170520524|gb|ACB18702.1| iron-sulfur cluster-binding protein [Escherichia coli SMS-3-5] Length = 239 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|218780114|ref|YP_002431432.1| NADH dehydrogenase (quinone) [Desulfatibacillum alkenivorans AK-01] gi|218761498|gb|ACL03964.1| Putative NADH-quinone oxidoreductase, NADH-binding subunit NuoF [Desulfatibacillum alkenivorans AK-01] Length = 633 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 TY + + C C C + CP + E + I D CI CG+CE C +A+ Sbjct: 577 TYSIDPDACTGCG--ACAKQCPNNAITGEKKEPHTIDTDACIRCGICEETCKFNAV 630 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +I PD C CG C +CP +AI + + Sbjct: 578 YSIDPDACTGCGACAKQCPNNAITGEKKEPH 608 >gi|156937394|ref|YP_001435190.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566378|gb|ABU81783.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Ignicoccus hospitalis KIN4/I] Length = 505 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 T C C VCP + E ++I PD+C CG+C CP Sbjct: 119 TFACASPSCRMCKSVCPSNAIRLKEGRVSIDPDKCTSCGLCVAACP 164 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 16/67 (23%) Query: 1 MTY-------VVTEN--CILCKHTDCVEVCPVDCF---YEGENFLAIH--PDECIDCGVC 46 M Y VV C C T C E CP + + P C+ C C Sbjct: 268 MAYSLEDFYEVVVNPKLCDAC--TACSEACPTRSLVLRTPTPAMVILTHLPAACVGCHAC 325 Query: 47 EPECPVD 53 CPV Sbjct: 326 VRACPVQ 332 >gi|160878249|ref|YP_001557217.1| NADH dehydrogenase (quinone) [Clostridium phytofermentans ISDg] gi|160426915|gb|ABX40478.1| NADH dehydrogenase (quinone) [Clostridium phytofermentans ISDg] Length = 628 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++ E C C T C +CPV E + +I +CI CG C+ C AI + Sbjct: 575 IIPELCKGC--TKCARLCPVSAISGEVKKLHSIDTKKCIKCGACKDSCGFKAIIEE 628 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTE 60 L I P+ C C C CPV AI + + Sbjct: 573 LKIIPELCKGCTKCARLCPVSAISGEVK 600 >gi|78189898|ref|YP_380236.1| polysulfide reductase, subunit B, putative [Chlorobium chlorochromatii CaD3] gi|78172097|gb|ABB29193.1| putative sulfite reductase-associated electron transfer protein DsrO [Chlorobium chlorochromatii CaD3] Length = 253 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C CV CP + + + + CI C C CP AI + + Sbjct: 115 CNHCAKAPCVTACPTSAIFRRYDGIVGLDFHRCIGCRACMTACPYSAISFNWKAP 169 >gi|310827326|ref|YP_003959683.1| hypothetical protein ELI_1734 [Eubacterium limosum KIST612] gi|308739060|gb|ADO36720.1| hypothetical protein ELI_1734 [Eubacterium limosum KIST612] Length = 223 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ CI C C E+C D EGE I+ + C +CG C CPV+AI Sbjct: 171 TITDACISCG--KCTELCYFDAVEEGEP-YKINGNRCDECGNCYHHCPVNAI 219 >gi|312878994|ref|ZP_07738794.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Aminomonas paucivorans DSM 12260] gi|310782285|gb|EFQ22683.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Aminomonas paucivorans DSM 12260] Length = 597 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ E C C T C +VCP + I ++C+ CG C C AI Sbjct: 542 YVIDPEKCKGC--TLCAKVCPAGAVTGKLKEAHVIDQEKCVKCGACFSACKFGAI 594 Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I P++C C +C CP A+ Sbjct: 541 QYVIDPEKCKGCTLCAKVCPAGAV 564 >gi|219851494|ref|YP_002465926.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] gi|219545753|gb|ACL16203.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanosphaerula palustris E1-9c] Length = 203 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C C++VCP + Y +AIH + CIDC VC CP I+ ++L Sbjct: 59 CRHCDPAPCMQVCPTEALYRDLSTGSVAIHYNRCIDCAVCAMACPFGVIRFQRVRQVDLP 118 Query: 67 LKINSE 72 +N++ Sbjct: 119 RDVNAK 124 >gi|71733335|ref|YP_275286.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485447|ref|ZP_05639488.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625433|ref|ZP_06458387.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649284|ref|ZP_06480627.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. 2250] gi|289679207|ref|ZP_06500097.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae FF5] gi|298487555|ref|ZP_07005597.1| NADH-ubiquinone oxidoreductase chain I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302185030|ref|ZP_07261703.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. syringae 642] gi|110287765|sp|Q48H47|NUOI_PSE14 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71553888|gb|AAZ33099.1| NADH-quinone oxidoreductase, I subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157939|gb|EFH99017.1| NADH-ubiquinone oxidoreductase chain I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323795|gb|EFW79879.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. B076] gi|320327934|gb|EFW83939.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. race 4] gi|330866831|gb|EGH01540.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881176|gb|EGH15325.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. glycinea str. race 4] gi|330900634|gb|EGH32053.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. japonica str. M301072PT] gi|330954556|gb|EGH54816.1| NADH dehydrogenase subunit I [Pseudomonas syringae Cit 7] gi|330981363|gb|EGH79466.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330987949|gb|EGH86052.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010720|gb|EGH90776.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 182 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMADF 127 >gi|66524760|ref|XP_623480.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform 2 [Apis mellifera] Length = 201 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 100 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 156 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 100 ERCIACKLCEAICPAQAITIEAEERAD 126 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 141 CIYCGF--CQEACPVDAIVEGPNF 162 >gi|30063184|ref|NP_837355.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] gi|30041436|gb|AAP17164.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 2457T] Length = 239 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPY 153 >gi|302348411|ref|YP_003816049.1| Indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Acidilobus saccharovorans 345-15] gi|302328823|gb|ADL19018.1| Indolepyruvate:ferredoxin oxidoreductase (IOR), alpha subunit [Acidilobus saccharovorans 345-15] Length = 633 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y V ++ C C CP F + + I P C CGVC CP AI Sbjct: 566 YQVEDDKCTACGICYNAFSCPA-IFVKDDRKAWIDPSLCTGCGVCAEICPYKAI 618 >gi|240102306|ref|YP_002958614.1| formate dehydrogenase I subunit B (fdh1B) [Thermococcus gammatolerans EJ3] gi|239909859|gb|ACS32750.1| formate dehydrogenase I subunit B (fdh1B) [Thermococcus gammatolerans EJ3] Length = 165 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 + V NC C+ C+ VCP + ++ P +CI C +C CP K D E Sbjct: 40 FTVPFNCRHCEKAPCLNVCPTGALFRDKDGAVAFDPLKCIGCLMCAVACPFGVPKLDEE 98 >gi|159905359|ref|YP_001549021.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159886852|gb|ABX01789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 658 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 23/86 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C CP++ E G I D CIDCG Sbjct: 240 YVDDDTCTGCG--ACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKDHCIDCG 297 Query: 45 VCEPECPVDAIKPDTEPGLELWLKIN 70 +C C +A++ D +P LK+N Sbjct: 298 LCAKVCCAEAVRYDQKPQE---LKLN 320 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPD--ECIDCGVCEPECPVDA 54 V E C CK C +CP + E + L D C CG C CP A Sbjct: 577 ATVNEEVCGGCKV--CALMCPYNAITYEEKDGHLVAITDDVACKGCGACAAACPSGA 631 >gi|145616212|ref|XP_360940.2| hypothetical protein MGG_03483 [Magnaporthe oryzae 70-15] gi|145009964|gb|EDJ94620.1| hypothetical protein MGG_03483 [Magnaporthe oryzae 70-15] Length = 229 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E + I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAVCPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 186 ESP----------NAEYATE 195 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E ++ Sbjct: 109 PISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERMD 154 >gi|150019924|ref|YP_001305278.1| cobyrinic acid a,c-diamide synthase [Thermosipho melanesiensis BI429] gi|149792445|gb|ABR29893.1| Cobyrinic acid a,c-diamide synthase [Thermosipho melanesiensis BI429] Length = 282 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + V + CI C +C C N + + C CG C CPV+AIK Sbjct: 61 LPVVDNDKCIKCG--ECSRACQFGAISVFPNSTVVFKNLCHGCGACTMVCPVNAIKE 115 >gi|158321169|ref|YP_001513676.1| hypothetical protein Clos_2144 [Alkaliphilus oremlandii OhILAs] gi|158141368|gb|ABW19680.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 220 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C C++ C CPVD E + + +CI CGVC+ CP D E Sbjct: 123 ETCKQCENPKCASACPVDAISLNERWGAWMVDESKCIGCGVCKRACPWGMPTVDPED 179 >gi|91200370|emb|CAJ73416.1| strongly similar to NADH dehydrogenase I chain I [Candidatus Kuenenia stuttgartiensis] Length = 171 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 12/61 (19%) Query: 6 TENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C VCPVDC F I+ CI CG CE CP AI Sbjct: 48 GERCVGCYL--CAAVCPVDCISLQATEDEYGRRYPEFFRINFSRCIFCGFCEDACPTYAI 105 Query: 56 K 56 + Sbjct: 106 Q 106 >gi|297570515|ref|YP_003691859.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfurivibrio alkaliphilus AHT2] gi|296926430|gb|ADH87240.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfurivibrio alkaliphilus AHT2] Length = 682 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C+ C +CV +CP E I+ + C+ CG+C CP AIK Sbjct: 486 ARVTADRCVKCL--NCVRLCPYQAPRI-EQVALINRERCLACGICHGACPTGAIK 537 >gi|268679825|ref|YP_003304256.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268617856|gb|ACZ12221.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 154 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 26/62 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C+ C+ C+ +CP E F+ + C+ CG C CP AI E LK Sbjct: 60 CMHCETPSCLAICPHGVISLEEGFIKLDETACVGCGCCALACPYGAISMVKEDERVYALK 119 Query: 69 IN 70 N Sbjct: 120 CN 121 >gi|294102605|ref|YP_003554463.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] gi|293617585|gb|ADE57739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] Length = 57 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C+ C+ CV CPV+ + + D CI+CG C CPV+AI Sbjct: 4 AVVDKDACVGCE--TCVGACPVEAISMVDGKAEVDADTCIECGSCVSVCPVNAI 55 >gi|283785099|ref|YP_003364964.1| oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] gi|282948553|emb|CBG88143.1| putative oxidoreductase Fe-S subunit [Citrobacter rodentium ICC168] Length = 208 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK C++VCP++ E + + CI C C CP Sbjct: 121 DTCRQCKDPQCMKVCPIEAIRWQPEEGCIVVDHKRCIGCSACTTACP 167 >gi|270669404|ref|ZP_06222601.1| Electron transport complex protein rnfB [Haemophilus influenzae HK1212] gi|270316570|gb|EFA28404.1| Electron transport complex protein rnfB [Haemophilus influenzae HK1212] Length = 180 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP D I Sbjct: 95 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCI 147 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E I + CI C C CPVDAI Sbjct: 92 EKVAFIDENMCIGCTKCIQACPVDAI 117 >gi|268323322|emb|CBH36910.1| heterodisulfide reductase subunit A [uncultured archaeon] Length = 668 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V C+ C C +CP D + ++ C CG C CP AI Sbjct: 595 AFVDEGVCVGCG--TCEAICPFDALSLEAGVMHVNEVVCKGCGSCRSACPSGAITMRHFK 652 Query: 62 GLELWLKINS 71 +++ +I + Sbjct: 653 DEQIYAQIEA 662 >gi|126459993|ref|YP_001056271.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249714|gb|ABO08805.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum calidifontis JCM 11548] Length = 369 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V + C LC CV VCP D E L I P CI CG+C +CP ++ P Sbjct: 255 VLQGCTLCG--ACVNVCPTDALSLREFELRIVPALCIGCGLCAEKCPEGVMRVSESPSPA 312 Query: 65 LW 66 + Sbjct: 313 PY 314 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 4 VVTEN--CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 VV ++ CI C C + CP E + C DCG+C CPV+AI+ + Sbjct: 80 VVADSGKCIWCG--ICAKACPFSAVKYAERKYVEVDYGLCADCGLCNAVCPVEAIQMPSL 137 Query: 61 PG 62 P Sbjct: 138 PD 139 >gi|297578622|ref|ZP_06940550.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297536216|gb|EFH75049.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 195 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|150389144|ref|YP_001319193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949006|gb|ABR47534.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 358 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 K C+E+CPV+ + E + I + C CG+C CP A++ Sbjct: 32 KCRKCIEICPVEAIKQKETIIVIDKNSCNGCGICNVVCPSQALE 75 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 5 VTENCILCKHTDCVEVCPVDC--FYEGENFLAI--HPDECIDCGVCEPECPVDAIK 56 V NC C C +CP + E E+ L I C C +C CP AI+ Sbjct: 253 VNLNCDGCSF--CQAICPWNSWQIEENEDQLVIKHSARTCRSCELCFKLCPNKAIE 306 >gi|320161224|ref|YP_004174448.1| iron-sulfur binding protein [Anaerolinea thermophila UNI-1] gi|319995077|dbj|BAJ63848.1| iron-sulfur binding protein [Anaerolinea thermophila UNI-1] Length = 203 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 15/71 (21%) Query: 9 CILCKHTDCVEVCPVDCF-------------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C +VCP C I D C++CG+C CP DAI Sbjct: 85 CTSCG--ICAKVCPPQCIWIVRTTDPNTGKPIPAPAEFYIDVDICMNCGLCAEYCPFDAI 142 Query: 56 KPDTEPGLELW 66 K D + + + Sbjct: 143 KMDHDYEIASY 153 >gi|319787565|ref|YP_004147040.1| electron transport complex, RnfABCDGE type subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317466077|gb|ADV27809.1| electron transport complex, RnfABCDGE type, B subunit [Pseudoxanthomonas suwonensis 11-1] Length = 141 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 V+ +CI C T C++ CPVD G + + P C C +C P CPVD I + Sbjct: 81 AVVIEADCIGC--TKCIQACPVDAIIGGAKLMHVVLDP-LCTGCELCVPACPVDCIVMEP 137 Query: 60 EPGL 63 P Sbjct: 138 APAA 141 >gi|317489733|ref|ZP_07948235.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911167|gb|EFV32774.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 221 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C +CV+VCP ++ E+ I +CI C C CP + + E Sbjct: 58 YYLPVQCQHCADPECVKVCPTGASHKLEDGTVQIDKAKCIGCQFCAMSCPYNVRYLNEEE 117 Query: 62 G 62 G Sbjct: 118 G 118 >gi|307728378|ref|YP_003905602.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1003] gi|323524668|ref|YP_004226821.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1001] gi|307582913|gb|ADN56311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1003] gi|323381670|gb|ADX53761.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Burkholderia sp. CCGE1001] Length = 85 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEP 61 I D E Sbjct: 59 IPRDPEH 65 >gi|220929712|ref|YP_002506621.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium cellulolyticum H10] gi|220000040|gb|ACL76641.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium cellulolyticum H10] Length = 623 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKP 57 E C C + C +CPV EG+ ++ +CI CG C CP AIK Sbjct: 573 EKCKGC--SKCARICPVQAI-EGKIKEPYTVNQSKCIKCGACLEVCPFAAIKE 622 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + I ++C C C CPV AI+ Sbjct: 568 IVIEKEKCKGCSKCARICPVQAIE 591 >gi|24113059|ref|NP_707569.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] gi|24052030|gb|AAN43276.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 2a str. 301] Length = 239 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPY 153 >gi|73982757|ref|XP_851642.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor (Complex I-23KD) (CI-23KD) (TYKY subunit) isoform 1 [Canis familiaris] Length = 216 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 119 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 175 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 119 ERCIACKLCEAVCPAQAITIEAEPRAD 145 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 160 CIYCGF--CQEACPVDAIVEGPNF 181 >gi|28210729|ref|NP_781673.1| ferredoxin [Clostridium tetani E88] gi|28203167|gb|AAO35610.1| rnfB/polyferredoxin [Clostridium tetani E88] Length = 290 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C CPV+ +N I+ D+C+ CG+C +CP AI Sbjct: 218 CISCGL--CARNCPVEAIEMVDNLPVINYDKCVQCGICVKKCPTKAI 262 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C +VC D + I ++C CG C CP A+ T ++ + N Sbjct: 148 GSCTQVCLFDAITIEDGIAVIDEEKCTGCGACVDICP-KAVIELTPMSKKVRIACN 202 Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--------------NFLAIHPDE--CIDCGVCEPEC 50 E C C CV++CP + CI CG+C C Sbjct: 171 EKCTGCG--ACVDICPKAVIELTPMSKKVRIACNSHDKGISVKNSCAVGCISCGLCARNC 228 Query: 51 PVDAIKPDTEPGLELW 66 PV+AI+ + + Sbjct: 229 PVEAIEMVDNLPVINY 244 >gi|15641031|ref|NP_230662.1| electron transport complex protein RnfB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587394|ref|ZP_01677164.1| RnfB-related protein [Vibrio cholerae 2740-80] gi|121729983|ref|ZP_01682400.1| RnfB-related protein [Vibrio cholerae V52] gi|147674952|ref|YP_001216488.1| electron transport complex protein RnfB [Vibrio cholerae O395] gi|153215075|ref|ZP_01949792.1| RnfB-related protein [Vibrio cholerae 1587] gi|153800913|ref|ZP_01955499.1| RnfB-related protein [Vibrio cholerae MZO-3] gi|153819293|ref|ZP_01971960.1| RnfB-related protein [Vibrio cholerae NCTC 8457] gi|153823433|ref|ZP_01976100.1| RnfB-related protein [Vibrio cholerae B33] gi|153824911|ref|ZP_01977578.1| RnfB-related protein [Vibrio cholerae MZO-2] gi|153829521|ref|ZP_01982188.1| RnfB-related protein [Vibrio cholerae 623-39] gi|227081190|ref|YP_002809741.1| RnfB-related protein [Vibrio cholerae M66-2] gi|229505385|ref|ZP_04394895.1| electron transport complex protein RnfB [Vibrio cholerae BX 330286] gi|229510945|ref|ZP_04400424.1| electron transport complex protein RnfB [Vibrio cholerae B33] gi|229515402|ref|ZP_04404861.1| electron transport complex protein RnfB [Vibrio cholerae TMA 21] gi|229518066|ref|ZP_04407510.1| electron transport complex protein RnfB [Vibrio cholerae RC9] gi|229529891|ref|ZP_04419281.1| electron transport complex protein RnfB [Vibrio cholerae 12129(1)] gi|229608404|ref|YP_002879052.1| electron transport complex protein RnfB [Vibrio cholerae MJ-1236] gi|254291761|ref|ZP_04962547.1| RnfB-related protein [Vibrio cholerae AM-19226] gi|254848146|ref|ZP_05237496.1| electron transport complex protein rnfB [Vibrio cholerae MO10] gi|255745441|ref|ZP_05419389.1| electron transport complex protein RnfB [Vibrio cholera CIRS 101] gi|262151307|ref|ZP_06028442.1| electron transport complex protein RnfB [Vibrio cholerae INDRE 91/1] gi|262167227|ref|ZP_06034939.1| electron transport complex protein RnfB [Vibrio cholerae RC27] gi|262191541|ref|ZP_06049724.1| electron transport complex protein RnfB [Vibrio cholerae CT 5369-93] gi|298498871|ref|ZP_07008678.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|17369129|sp|Q9KT87|RNFB_VIBCH RecName: Full=Electron transport complex protein rnfB gi|172047411|sp|A5F2R3|RNFB_VIBC3 RecName: Full=Electron transport complex protein rnfB gi|254807927|sp|C3LTR4|RNFB_VIBCM RecName: Full=Electron transport complex protein rnfB gi|9655480|gb|AAF94177.1| RnfB-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548397|gb|EAX58459.1| RnfB-related protein [Vibrio cholerae 2740-80] gi|121628269|gb|EAX60782.1| RnfB-related protein [Vibrio cholerae V52] gi|124114938|gb|EAY33758.1| RnfB-related protein [Vibrio cholerae 1587] gi|124123504|gb|EAY42247.1| RnfB-related protein [Vibrio cholerae MZO-3] gi|126510153|gb|EAZ72747.1| RnfB-related protein [Vibrio cholerae NCTC 8457] gi|126519042|gb|EAZ76265.1| RnfB-related protein [Vibrio cholerae B33] gi|146316835|gb|ABQ21374.1| RnfB-related protein [Vibrio cholerae O395] gi|148874981|gb|EDL73116.1| RnfB-related protein [Vibrio cholerae 623-39] gi|149741423|gb|EDM55453.1| RnfB-related protein [Vibrio cholerae MZO-2] gi|150422354|gb|EDN14315.1| RnfB-related protein [Vibrio cholerae AM-19226] gi|227009078|gb|ACP05290.1| RnfB-related protein [Vibrio cholerae M66-2] gi|227012833|gb|ACP09043.1| RnfB-related protein [Vibrio cholerae O395] gi|229333665|gb|EEN99151.1| electron transport complex protein RnfB [Vibrio cholerae 12129(1)] gi|229344781|gb|EEO09755.1| electron transport complex protein RnfB [Vibrio cholerae RC9] gi|229347171|gb|EEO12131.1| electron transport complex protein RnfB [Vibrio cholerae TMA 21] gi|229350910|gb|EEO15851.1| electron transport complex protein RnfB [Vibrio cholerae B33] gi|229357608|gb|EEO22525.1| electron transport complex protein RnfB [Vibrio cholerae BX 330286] gi|229371059|gb|ACQ61482.1| electron transport complex protein RnfB [Vibrio cholerae MJ-1236] gi|254843851|gb|EET22265.1| electron transport complex protein rnfB [Vibrio cholerae MO10] gi|255736516|gb|EET91913.1| electron transport complex protein RnfB [Vibrio cholera CIRS 101] gi|262024371|gb|EEY43060.1| electron transport complex protein RnfB [Vibrio cholerae RC27] gi|262030923|gb|EEY49552.1| electron transport complex protein RnfB [Vibrio cholerae INDRE 91/1] gi|262032595|gb|EEY51150.1| electron transport complex protein RnfB [Vibrio cholerae CT 5369-93] gi|297543204|gb|EFH79254.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327483732|gb|AEA78139.1| Electron transport complex protein RnfB [Vibrio cholerae LMA3894-4] Length = 195 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|257463175|ref|ZP_05627575.1| putative [Fe] hydrogenase, electron-transfer subunit [Fusobacterium sp. D12] gi|317060766|ref|ZP_07925251.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium sp. D12] gi|313686442|gb|EFS23277.1| NADH:ubiquinone oxidoreductase subunit [Fusobacterium sp. D12] Length = 594 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 Y +T+ C+ C T C CPV I E CI CG+C C AI Sbjct: 540 YRITDKCVGC--TLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAI 591 >gi|217419601|ref|ZP_03451107.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 576] gi|217396905|gb|EEC36921.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 576] Length = 290 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|170691508|ref|ZP_02882673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] gi|170143713|gb|EDT11876.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia graminis C4D1M] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEP 61 I D E Sbjct: 59 IPRDPEH 65 >gi|195940382|ref|ZP_03085764.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. EC4024] gi|209396610|ref|YP_002270739.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209158010|gb|ACI35443.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209769272|gb|ACI82948.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209769276|gb|ACI82950.1| putative oxidoreductase Fe-S subunit [Escherichia coli] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|146309206|ref|YP_001189671.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|330505428|ref|YP_004382297.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] gi|145577407|gb|ABP86939.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] gi|328919714|gb|AEB60545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTE 60 I D Sbjct: 59 IPLDEN 64 >gi|110805647|ref|YP_689167.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] gi|170019979|ref|YP_001724933.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|209918984|ref|YP_002293068.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE11] gi|218554237|ref|YP_002387150.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli IAI1] gi|218695232|ref|YP_002402899.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli 55989] gi|307310758|ref|ZP_07590404.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|110615195|gb|ABF03862.1| putative oxidoreductase, Fe-S subunit [Shigella flexneri 5 str. 8401] gi|169754907|gb|ACA77606.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|209912243|dbj|BAG77317.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE11] gi|218351964|emb|CAU97696.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli 55989] gi|218361005|emb|CAQ98579.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli IAI1] gi|306908936|gb|EFN39432.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|315060976|gb|ADT75303.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli W] gi|323378452|gb|ADX50720.1| putative oxidoreductase, Fe-S subunit [Escherichia coli KO11] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|53718739|ref|YP_107725.1| ferredoxin [Burkholderia pseudomallei K96243] gi|134281040|ref|ZP_01767749.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 305] gi|237811474|ref|YP_002895925.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia pseudomallei MSHR346] gi|52209153|emb|CAH35097.1| putative electron transport-related protein [Burkholderia pseudomallei K96243] gi|134247346|gb|EBA47431.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 305] gi|237505183|gb|ACQ97501.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia pseudomallei MSHR346] Length = 290 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|121605275|ref|YP_982604.1| RnfABCDGE type electron transport complex subunit B [Polaromonas naphthalenivorans CJ2] gi|120594244|gb|ABM37683.1| electron transport complex, RnfABCDGE type, B subunit [Polaromonas naphthalenivorans CJ2] Length = 231 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD----TEPG 62 CI C T C++ CP D I P C C +C P CPVD I + T G Sbjct: 97 CIGC--TLCIKACPTDAIIGSNKLMHTVIEP-YCTGCELCIPACPVDCISLENLTGTHTG 153 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPNPGGK 111 W ++E A + + + ++AK +K ++ S P Sbjct: 154 WNAWSPQDAETARKRYESHRMQHTHDNSAK----PEKLQEKVSATPAKP 198 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 28 EGENFLAIHPDE-CIDCGVCEPECPVDAI 55 E +AI + CI C +C CP DAI Sbjct: 84 EAPRAVAIIDEAWCIGCTLCIKACPTDAI 112 >gi|254298437|ref|ZP_04965889.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 406e] gi|157808125|gb|EDO85295.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 406e] Length = 281 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|331673230|ref|ZP_08373998.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA280] gi|331069428|gb|EGI40815.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA280] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|326202709|ref|ZP_08192577.1| NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding [Clostridium papyrosolvens DSM 2782] gi|325987293|gb|EGD48121.1| NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding [Clostridium papyrosolvens DSM 2782] Length = 414 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAI 55 Y+ C+ C C++ CPVDC ++ + D +C CG C C AI Sbjct: 340 YINAAKCVGCG--ICIKSCPVDCIEGLPGYIHMIEDIDCTKCGKCIEVCEAGAI 391 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + I+ +C+ CG+C CPVD I+ Sbjct: 339 VYINAAKCVGCGICIKSCPVDCIE 362 >gi|304312861|ref|YP_003812459.1| hypothetical protein HDN1F_32410 [gamma proteobacterium HdN1] gi|301798594|emb|CBL46824.1| Hypothetical protein HDN1F_32410 [gamma proteobacterium HdN1] Length = 296 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + D+C C +C CPVD I Sbjct: 91 DECIGC--TKCIQACPVDAILGAAQLMHTVIGDQCTGCNLCVEPCPVDCI 138 Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 87 VIREDECIGCTKCIQACPVDAI 108 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 115 MHTVIGDQCTGCNL--CVEPCPVDCI 138 >gi|300939008|ref|ZP_07153705.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 21-1] gi|300456078|gb|EFK19571.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 21-1] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|298370606|ref|ZP_06981921.1| ferredoxin [Neisseria sp. oral taxon 014 str. F0314] gi|298281216|gb|EFI22706.1| ferredoxin [Neisseria sp. oral taxon 014 str. F0314] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|284161787|ref|YP_003400410.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284011784|gb|ADB57737.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 557 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + +NC LC C+ CP++ + + + + CI C +C CP AI+ + Sbjct: 426 INDNCTLCN--ACMNFCPMEAIKKEDGKILFNHALCIACEMCAKACPEKAIEVEKALDF 482 >gi|225572306|ref|ZP_03781170.1| hypothetical protein RUMHYD_00600 [Blautia hydrogenotrophica DSM 10507] gi|225040188|gb|EEG50434.1| hypothetical protein RUMHYD_00600 [Blautia hydrogenotrophica DSM 10507] Length = 56 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M +V+T+ C+ C C CP E E I+ +C+ CG C CP AI Sbjct: 1 MAFVITDRCVKCG--ACESECPNKAIVEEEKKFCINYRKCLQCGNCIDVCPNKAI 53 >gi|225075481|ref|ZP_03718680.1| hypothetical protein NEIFLAOT_00486 [Neisseria flavescens NRL30031/H210] gi|241760438|ref|ZP_04758532.1| ferredoxin [Neisseria flavescens SK114] gi|261364710|ref|ZP_05977593.1| ferredoxin [Neisseria mucosa ATCC 25996] gi|261380556|ref|ZP_05985129.1| hypothetical protein NEISUBOT_04575 [Neisseria subflava NJ9703] gi|224953200|gb|EEG34409.1| hypothetical protein NEIFLAOT_00486 [Neisseria flavescens NRL30031/H210] gi|241319107|gb|EER55600.1| ferredoxin [Neisseria flavescens SK114] gi|284796524|gb|EFC51871.1| ferredoxin [Neisseria subflava NJ9703] gi|288567006|gb|EFC88566.1| ferredoxin [Neisseria mucosa ATCC 25996] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|218705169|ref|YP_002412688.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli UMN026] gi|293405169|ref|ZP_06649161.1| ferredoxin-like protein ydhX [Escherichia coli FVEC1412] gi|298380812|ref|ZP_06990411.1| ferredoxin-like protein ydhX [Escherichia coli FVEC1302] gi|218432266|emb|CAR13156.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli UMN026] gi|291427377|gb|EFF00404.1| ferredoxin-like protein ydhX [Escherichia coli FVEC1412] gi|298278254|gb|EFI19768.1| ferredoxin-like protein ydhX [Escherichia coli FVEC1302] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|182417534|ref|ZP_02948861.1| pyruvate formate-lyase 2-activating enzyme [Clostridium butyricum 5521] gi|237665714|ref|ZP_04525702.1| glycyl-radical enzyme activating protein family [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378703|gb|EDT76230.1| pyruvate formate-lyase 2-activating enzyme [Clostridium butyricum 5521] gi|237658661|gb|EEP56213.1| glycyl-radical enzyme activating protein family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 298 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI C CV CP ++ + I ++C C C CP A++ + E Sbjct: 55 CIHCL--SCVNSCPSQAIQHQDDKIIIDHEKCTGCLTCANICPQKALENEGE 104 >gi|167585418|ref|ZP_02377806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Burkholderia ubonensis Bu] Length = 89 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPRDPQHAETH 69 >gi|91778366|ref|YP_553574.1| iron-sulfur cluster-binding protein [Burkholderia xenovorans LB400] gi|91691026|gb|ABE34224.1| iron-sulfur cluster-binding protein [Burkholderia xenovorans LB400] Length = 251 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYCAWACPYGARELDE 125 >gi|71909336|ref|YP_286923.1| 4Fe-4S ferredoxin, iron-sulfur binding [Dechloromonas aromatica RCB] gi|71848957|gb|AAZ48453.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Dechloromonas aromatica RCB] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + +GE I P++C +C C CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNEAISQGEEVYVIDPNKCTECVGHYDEPQCVQVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|77459832|ref|YP_349339.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf0-1] gi|110287767|sp|Q3KA56|NUOI_PSEPF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|77383835|gb|ABA75348.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf0-1] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|113461203|ref|YP_719272.1| electron transport complex protein RnfB [Haemophilus somnus 129PT] gi|112823246|gb|ABI25335.1| electron transport complex protein [Haemophilus somnus 129PT] Length = 196 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I D C C +C CP D I Sbjct: 106 AFIDEDMCIGC--TKCIQACPVDAIIGTNKAMHTIIADLCTGCELCVAPCPTDCI 158 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 12/26 (46%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 I D CI C C CPVDAI Sbjct: 103 PKVAFIDEDMCIGCTKCIQACPVDAI 128 >gi|331683178|ref|ZP_08383779.1| putative oxidoreductase Fe-S subunit [Escherichia coli H299] gi|331079393|gb|EGI50590.1| putative oxidoreductase Fe-S subunit [Escherichia coli H299] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|304314067|ref|YP_003849214.1| carbon monoxide dehydrogenase, iron sulfur subunit [Methanothermobacter marburgensis str. Marburg] gi|302587526|gb|ADL57901.1| carbon monoxide dehydrogenase, iron sulfur subunit [Methanothermobacter marburgensis str. Marburg] Length = 154 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 9 CILC--KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C + C +CPV E + L I D CI C +C CP I D+E Sbjct: 39 CLQCHPEKAPCARICPVGAIREVDGALVIDEDACILCKLCMVACPAGMIVLDSE 92 >gi|219852155|ref|YP_002466587.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] gi|219546414|gb|ACL16864.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] Length = 289 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T C C CVE C + D C+ CG+C CP + IK Sbjct: 161 ITGICTGCG--SCVEYCREGAIRIKNGISVLDLDTCVQCGICVKSCPFNVIK 210 >gi|325294577|ref|YP_004281091.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065025|gb|ADY73032.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 765 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 20/74 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCGVCEP 48 + CI C +C +VCPV+ E + I CI CG CE Sbjct: 245 DKCIACG--ECEKVCPVEVPNEFNLGKTKRKAIYKPFPLAIPDVYHIDEAACIFCGECEK 302 Query: 49 ECPVDAIKPDTEPG 62 CP AI E Sbjct: 303 VCPTQAINLQAESE 316 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 8/64 (12%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C C+ C+ CP +N++ I P+ C CG+C CP AI Sbjct: 555 DKCSRCE--TCLMCCPHGAISVKKGKTPEDNWIEIDPNLCRGCGLCYAACPSKAINFSNL 612 Query: 61 PGLE 64 + Sbjct: 613 EDEQ 616 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 12/19 (63%), Positives = 15/19 (78%) Query: 35 IHPDECIDCGVCEPECPVD 53 I+PD+CI CG CE CPV+ Sbjct: 242 INPDKCIACGECEKVCPVE 260 >gi|320591509|gb|EFX03948.1| NADH-quinone oxidoreductase [Grosmannia clavigera kw1407] Length = 243 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 142 ERCIACKL--CEAICPAQAITIEAEERADGSRRTSRYDIDMTKCIYCGFCQESCPVDAIV 199 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 200 ESP----------NAEYATE 209 >gi|295675400|ref|YP_003603924.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] gi|295435243|gb|ADG14413.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. CCGE1002] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IPRDPNHPE 67 >gi|146276820|ref|YP_001166979.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555061|gb|ABP69674.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 237 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C C+ CV VCP + + I C+ CG+C CP A + D Sbjct: 77 CQHCEDPPCVPVCPTGASQLRPDGVVAIDDARCLGCGLCAWACPYGARELD 127 >gi|331000330|ref|ZP_08324011.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329572126|gb|EGG53791.1| putative formate dehydrogenase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 321 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C+ + C E CP E + D C+ CG+C CP + Sbjct: 145 SDQCKHCRTSPCHEACPTGAIVRNEFGGVYYQTDICMGCGMCVAACPFGVPE 196 >gi|325267342|ref|ZP_08134004.1| ferredoxin [Kingella denitrificans ATCC 33394] gi|324981279|gb|EGC16929.1| ferredoxin [Kingella denitrificans ATCC 33394] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPESH 69 >gi|315126995|ref|YP_004068998.1| electron transport complex protein RnfB [Pseudoalteromonas sp. SM9913] gi|315015509|gb|ADT68847.1| electron transport complex protein RnfB [Pseudoalteromonas sp. SM9913] Length = 184 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIVGATRQMHTVLIDECTGCDLCVEPCPVDCI 159 >gi|302391758|ref|YP_003827578.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302203835|gb|ADL12513.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 178 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C VCP E+ + I D+CI C +C CP I+ Sbjct: 60 CRHCDDAPCETVCPTGAIGRENSESPVVIEKDKCIGCKMCLQVCPFGVIE 109 >gi|301062088|ref|ZP_07202789.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] gi|300443814|gb|EFK07878.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] Length = 1394 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 4 VVT-----ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 VVT E C C CV CP + + I P C CG+C ECP I+ Sbjct: 1317 VVTASVDQEKCAACLV--CVRSCPYNVPKINADGVSEIDPALCRGCGICVSECPAKVIQL 1374 Query: 58 DTEPGLELWLKINS 71 ++ K+ + Sbjct: 1375 GWYEDDQVMSKVEA 1388 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 I +C CG C CPV A+ + + G+ +YA P+ Sbjct: 18 FIDESKCTACGDCTDVCPV-ALPNEYDQGMSQKRATFKKYAQAIPS 62 >gi|269121726|ref|YP_003309903.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] gi|268615604|gb|ACZ09972.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sebaldella termitidis ATCC 33386] Length = 261 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C C + CPV EN ++CI C C CPV A D E Sbjct: 187 GEACYDC--MKCAKECPVSAISF-ENPRIADANKCIHCCACVKACPVKAKYFDNEMMKNF 243 Query: 66 WLKINSEYATQWPNI 80 + + +++A + NI Sbjct: 244 SVMLETKFAEKKENI 258 >gi|268591834|ref|ZP_06126055.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rettgeri DSM 1131] gi|291312803|gb|EFE53256.1| cytochrome c nitrite reductase, Fe-S protein [Providencia rettgeri DSM 1131] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 +C C+ CV+VCP + + ++PD C+ C C CP Sbjct: 91 SCQHCESAPCVDVCPTGASFIDKTTGIVDVNPDLCVGCQYCIAACPY 137 >gi|206889752|ref|YP_002248980.1| NrfC protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741690|gb|ACI20747.1| NrfC protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 185 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +E C C+ C++ CP + ++ I +CI C C CP DA Sbjct: 55 SELCNHCEEAPCIDACPTRASHRAKDGTVQIDRKKCIGCKACILACPYDA 104 >gi|218778106|ref|YP_002429424.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759490|gb|ACL01956.1| Heterodisulfide reductase, subunit A-like protein [Desulfatibacillum alkenivorans AK-01] Length = 1012 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 25/82 (30%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEG---------------ENFLAIHPDECID-- 42 YV TE CI C C CP D + +G AI P++C+ Sbjct: 103 YVDTEKCIACGQ--CAAKCPKKVTDEYNQGLIKRKAIYVPYPQAVPLKFAIDPEQCLKLT 160 Query: 43 ---CGVCEPECPVDAIKPDTEP 61 CG CE CP AI D + Sbjct: 161 KDKCGNCEKVCPAGAILYDDKE 182 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 7/53 (13%) Query: 9 CILCKHTDCVEVCPVDC---FYEGEN--FLAIHPDECIDCGVCEPECPVDAIK 56 C C CV CP EG N I+P C CG C C A+ Sbjct: 943 CSSC--MVCVSTCPYSAPSMVKEGPNAGKAEINPVLCKGCGQCVASCRSGALH 993 >gi|167629546|ref|YP_001680045.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein, putative [Heliobacterium modesticaldum Ice1] gi|119675286|gb|ABL89192.1| ferredoxin-like protein [Heliobacterium modesticaldum] gi|167592286|gb|ABZ84034.1| 4fe-4S ferredoxin, iron-sulfur binding domain protein, putative [Heliobacterium modesticaldum Ice1] Length = 54 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M Y +++ C+ C C + CPV+ +G+ + D CIDCG C CP AI Sbjct: 1 MVYKISDACVACG--ACEDACPVNAIIKGD--VYSITDACIDCGTCADTCPAGAI 51 >gi|91210884|ref|YP_540870.1| putative oxidoreductase Fe-S subunit [Escherichia coli UTI89] gi|117623852|ref|YP_852765.1| putative oxidoreductase Fe-S subunit [Escherichia coli APEC O1] gi|237705617|ref|ZP_04536098.1| iron-sulfur cluster-binding protein [Escherichia sp. 3_2_53FAA] gi|331657646|ref|ZP_08358608.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA206] gi|91072458|gb|ABE07339.1| putative oxidoreductase Fe-S subunit [Escherichia coli UTI89] gi|115512976|gb|ABJ01051.1| putative oxidoreductase Fe-S subunit [Escherichia coli APEC O1] gi|226900374|gb|EEH86633.1| iron-sulfur cluster-binding protein [Escherichia sp. 3_2_53FAA] gi|294493141|gb|ADE91897.1| iron-sulfur cluster-binding protein [Escherichia coli IHE3034] gi|307626843|gb|ADN71147.1| putative oxidoreductase Fe-S subunit [Escherichia coli UM146] gi|315286339|gb|EFU45775.1| putative thiosulfate reductase electron transport protein phsb [Escherichia coli MS 110-3] gi|331055894|gb|EGI27903.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA206] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|92115052|ref|YP_574980.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91798142|gb|ABE60281.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 82 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP GE I P+ C +C C+ CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAISPGEEIYVIDPNLCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPDTE 60 I D E Sbjct: 59 IPLDPE 64 >gi|58261400|ref|XP_568110.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115557|ref|XP_773492.1| hypothetical protein CNBI1060 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256118|gb|EAL18845.1| hypothetical protein CNBI1060 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230192|gb|AAW46593.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 273 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 134 ERCIACKL--CEAICPAQAITIESEAREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 190 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI ++E + Sbjct: 115 PLSARFRGEHALRRYPNGEERCIACKLCEAICPAQAITIESEARED 160 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD E +N Sbjct: 175 CIYCGF--CQEACPVDAIVETQNQ 196 >gi|328908342|gb|EGG28101.1| anaerobic dimethyl sulfoxide reductase, chain B [Propionibacterium sp. P08] Length = 161 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 TY + +C C+ +EVCP ++ + + D+C+ C CE CP A + Sbjct: 106 TYYTSISCNHCEDPIYMEVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQ 161 >gi|329914674|ref|ZP_08276144.1| Iron-sulfur cluster-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327545089|gb|EGF30386.1| Iron-sulfur cluster-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 547 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 I C T C++VC D N + + P+ C+ CG C CP A Sbjct: 169 IGC--TSCIDVCSADAIRHDGNLVKVVPNLCVGCGACTTVCPSGA 211 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 T C LC CV CP + + L C+ CG+CE CP +AI Sbjct: 412 TSACTLC--MSCVGACPESALMDNADLPQLRFVEKNCVQCGLCETTCPENAI 461 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 9/21 (42%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + C C C CP AI Sbjct: 43 IDLEICTRCNACVDACPEQAI 63 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 15/36 (41%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 I+ C C C CP A+ + + +++ N Sbjct: 410 INTSACTLCMSCVGACPESALMDNADLPQLRFVEKN 445 Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 19/59 (32%), Gaps = 6/59 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC-PVDAIKPDTEPGLE 64 E C C CV+ CP + I ++C C C + AI + Sbjct: 46 EICTRCN--ACVDACPEQAI---DLMYQIDLNKCTSHSDCVKACGSIGAIDFNRTATQR 99 >gi|303257710|ref|ZP_07343722.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] gi|302859680|gb|EFL82759.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderiales bacterium 1_1_47] Length = 192 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 C C++ CV+ CP Y EN L PD+C+ C C CP DA Sbjct: 67 CQQCENAPCVKTCPFGANYYDENGLVRNDPDKCVGCNYCIASCPYDA 113 >gi|295106095|emb|CBL03638.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Gordonibacter pamelaeae 7-10-1-b] Length = 382 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C + CP D +N LA+ + C+ CG C CP +A+ P +L Sbjct: 37 RKCTDACPTDAVGAKDNVLALDNERCVACGACTTVCPTEALIPLAPLDEDL 87 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 10/56 (17%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-------EGEN-FLAIHPDECIDCGVCEPEC 50 +V E C C C CP EGE FL +C+ C +C C Sbjct: 288 HVDAEACSSCG--MCAVFCPTGALKKSDLVPEEGEGSFLEFSAADCVQCNLCADAC 341 >gi|288958539|ref|YP_003448880.1| nitrogen fixation protein [Azospirillum sp. B510] gi|288910847|dbj|BAI72336.1| nitrogen fixation protein [Azospirillum sp. B510] Length = 514 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 +CI CK CV VCP EG+ CI CG+C C Sbjct: 290 DCIDCKQ--CVHVCPTGTDIREGQQI------SCIGCGLCVDAC 325 >gi|281178741|dbj|BAI55071.1| putative oxidoreductase Fe-S subunit [Escherichia coli SE15] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGVCPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNIT 81 + + A +P I Sbjct: 167 KCDFCAETRLAKGFPPIC 184 >gi|317152504|ref|YP_004120552.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942755|gb|ADU61806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 302 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 TYV + C+ C+ CV C + EN D+CI C C CP + + Sbjct: 106 TYVKVQ-CMHCQDPACVSACITGALTKKENGTVHYDVDKCIGCRYCMAACPFEIPAYEYH 164 Query: 61 PG 62 Sbjct: 165 EP 166 >gi|218551401|ref|YP_002385193.1| anaerobic reductase chain B [Escherichia fergusonii ATCC 35469] gi|301648118|ref|ZP_07247877.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|218358943|emb|CAQ91603.1| putative anaerobic reductase chain B (DMSO reductase iron-sulfur subunit) [Escherichia fergusonii ATCC 35469] gi|301073785|gb|EFK88591.1| dimethylsulfoxide reductase, chain B [Escherichia coli MS 146-1] gi|324112272|gb|EGC06250.1| dimethylsulfoxide reductase [Escherichia fergusonii B253] gi|325499669|gb|EGC97528.1| anaerobic reductase chain B (DMSO reductase iron-sulfur subunit) [Escherichia fergusonii ECD227] Length = 208 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ++ C C CV CP + E + + + C+ C CE CP A + DT Sbjct: 59 TYYLSIACNHCDEPTCVAGCPTGAMHKREEDGLVLVDDSVCVGCRYCEMRCPYGAPQFDT 118 Query: 60 EP 61 + Sbjct: 119 QA 120 >gi|156975002|ref|YP_001445909.1| hypothetical protein VIBHAR_02724 [Vibrio harveyi ATCC BAA-1116] gi|156526596|gb|ABU71682.1| hypothetical protein VIBHAR_02724 [Vibrio harveyi ATCC BAA-1116] Length = 165 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H ++C+ CG C CP Sbjct: 32 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKEKCVGCGYCLAACPYQ 80 >gi|241661892|ref|YP_002980252.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12D] gi|240863919|gb|ACS61580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12D] Length = 87 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPVD Sbjct: 1 MALIITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|77165396|ref|YP_343921.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nitrosococcus oceani ATCC 19707] gi|254433504|ref|ZP_05047012.1| 4Fe-4S binding domain protein [Nitrosococcus oceani AFC27] gi|76883710|gb|ABA58391.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Nitrosococcus oceani ATCC 19707] gi|207089837|gb|EDZ67108.1| 4Fe-4S binding domain protein [Nitrosococcus oceani AFC27] Length = 84 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I P C +C C CPV+ Sbjct: 1 MALLITDECINCDV--CEPECPNGAISQGEEIYVIEPKLCTECVGHFETPQCVEVCPVEC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAISQGEE 29 >gi|109105179|ref|XP_001104103.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Macaca mulatta] gi|62287022|sp|Q60HE3|NDUS8_MACFA RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|52782251|dbj|BAD51972.1| NADH dehydrogenase Fe-S protein 8 [Macaca fascicularis] gi|90076936|dbj|BAE88148.1| unnamed protein product [Macaca fascicularis] Length = 210 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAVCPAQAITIEAEPRAD 135 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|150019644|ref|YP_001311898.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906109|gb|ABR36942.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 368 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V + C+ C C + C + I+ +C+ CG C CP+DA+ P ++ Sbjct: 192 VYEDKCVGCG--MCAKNCAHSAISLTDKKALINHSKCVGCGRCIGICPMDAVMPASDESN 249 Query: 64 ELWLKINSEYATQWPNITTK 83 ++ K +EY+ W + + Sbjct: 250 DILNKKIAEYS--WAVLNGR 267 >gi|148257236|ref|YP_001241821.1| putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. BTAi1] gi|146409409|gb|ABQ37915.1| Putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. BTAi1] Length = 495 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 17/82 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C CV VCP+ +G NF CI+CG+C C + D GL + Sbjct: 290 DCVDCG--ACVAVCPIGIDIRQGPNF------ACINCGLCVDACDGVMARLDRPRGLIDY 341 Query: 67 LKINSEYATQWPNITTKKESLP 88 W NI + P Sbjct: 342 --------ESWDNIERGRAGQP 355 >gi|325916606|ref|ZP_08178869.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537160|gb|EGD08893.1| electron transport complex, RnfABCDGE type, B subunit [Xanthomonas vesicatoria ATCC 35937] Length = 139 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 81 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 134 >gi|325958954|ref|YP_004290420.1| methyl-viologen-reducing hydrogenase subunit delta [Methanobacterium sp. AL-21] gi|325330386|gb|ADZ09448.1| methyl-viologen-reducing hydrogenase delta subunit [Methanobacterium sp. AL-21] Length = 777 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 20/79 (25%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC------------------FYEGENFLAIHPDECIDC 43 +YV+ CI C +C EVCPV+ + I + C C Sbjct: 247 SYVIKGKCISCG--NCAEVCPVEVSDSWNEDMTTRKAIFKPFPQAVPDVYTIDHENCKKC 304 Query: 44 GVCEPECPVDAIKPDTEPG 62 G C+ C ++AI D E Sbjct: 305 GKCQDVCRMNAIDLDMETE 323 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V C LC C+++C + EN L I P C CG C EC +AI + Sbjct: 583 VDNSKCNLC--QKCIDICSFKAAFIQENVLKIDPIACNGCGACIAECETNAIDIIGQTDE 640 Query: 64 ELWLKINSEYATQWPN 79 +L+ I+ + P+ Sbjct: 641 QLFAMIDGMLINKKPD 656 >gi|296241805|ref|YP_003649292.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296094389|gb|ADG90340.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermosphaera aggregans DSM 11486] Length = 169 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 + +C+ C C++VCP + + + P +CI C C CP + D Sbjct: 53 IPVSCLHCAKAPCIDVCPTGAMTRDKEGAVYVIPSKCIGCMACLYACPFGIPQLD 107 >gi|254884334|ref|ZP_05257044.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837127|gb|EET17436.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 394 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPV 52 E+C C T C+ C + E+ F I+ ++C++CG+C CPV Sbjct: 8 ESCTGC--TACMNSCSHNAIVMAEDAEGFIFPHINGNKCVECGLCMRVCPV 56 >gi|298529637|ref|ZP_07017040.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511073|gb|EFI34976.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 652 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C C++VCP E G+ + C CG+C CP AI+ + Sbjct: 584 CIGCG--KCIQVCPFGAVKEVDFRGQPKAEVIETVCQGCGICTATCPQGAIQLSHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 26/86 (30%), Gaps = 26/86 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 YV + C C C+E CP D F E I PD C Sbjct: 235 AYVNWDLCTGCGL--CMEKCPAKKSTDYFNENLGKTTAINIPFPQAIPKKAVIDPDFCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPGL 63 C VC CP AI + + Sbjct: 293 FTKGKCSVCAKLCPTKAIDFEQQEEF 318 >gi|164663359|ref|XP_001732801.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] gi|159106704|gb|EDP45587.1| hypothetical protein MGL_0576 [Malassezia globosa CBS 7966] Length = 245 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 144 ERCIACKL--CEAICPALAITIESEPRMDGSRRTTRYDIDMTKCIYCGMCQEACPVDAI 200 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 PV + GE+ L +P + CI C +CE CP AI ++EP ++ Sbjct: 125 PVSPRFRGEHALRRYPTGEERCIACKLCEAICPALAITIESEPRMD 170 >gi|30064072|ref|NP_838243.1| electron transport protein HydN [Shigella flexneri 2a str. 2457T] gi|56480169|ref|NP_708520.2| electron transport protein HydN [Shigella flexneri 2a str. 301] gi|30042328|gb|AAP18053.1| 4Fe-4S iron-sulfur protein [Shigella flexneri 2a str. 2457T] gi|56383720|gb|AAN44227.2| 4Fe-4S iron-sulfur protein [Shigella flexneri 2a str. 301] gi|281602082|gb|ADA75066.1| 4Fe-4S iron-sulfur protein [Shigella flexneri 2002017] gi|313648193|gb|EFS12638.1| hydrogenase-4 component A [Shigella flexneri 2a str. 2457T] gi|332753430|gb|EGJ83810.1| hydrogenase-4 component A [Shigella flexneri 4343-70] gi|332753940|gb|EGJ84315.1| hydrogenase-4 component A [Shigella flexneri K-671] gi|332755674|gb|EGJ86037.1| hydrogenase-4 component A [Shigella flexneri 2747-71] gi|332765664|gb|EGJ95877.1| putative electron transport protein HydN [Shigella flexneri 2930-71] gi|333000620|gb|EGK20197.1| hydrogenase-4 component A [Shigella flexneri K-218] gi|333015799|gb|EGK35135.1| hydrogenase-4 component A [Shigella flexneri K-304] Length = 175 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISRDKGFVPVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|313835401|gb|EFS73115.1| putative dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL037PA2] gi|314929259|gb|EFS93090.1| putative dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL044PA1] gi|314972422|gb|EFT16519.1| putative dimethylsulfoxide reductase, chain B [Propionibacterium acnes HL037PA3] Length = 160 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 TY + +C C+ +EVCP ++ + + D+C+ C CE CP A + Sbjct: 105 TYYTSISCNHCEDPIYMEVCPTTAMSRRDDGTVYVDQDKCVGCRYCEWACPYSAPQ 160 >gi|296116527|ref|ZP_06835137.1| NADH dehydrogenase subunit I [Gluconacetobacter hansenii ATCC 23769] gi|295976739|gb|EFG83507.1| NADH dehydrogenase subunit I [Gluconacetobacter hansenii ATCC 23769] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C CP + +G I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEATCPAEAITIEAEPRDDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 117 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP +AI + EP + Sbjct: 61 ERCIACKLCEATCPAEAITIEAEPRDD 87 Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG N+ Sbjct: 102 CIYCGL--CEEACPVDAIVEGPNY 123 >gi|182889618|gb|AAI65418.1| Zgc:109991 protein [Danio rerio] Length = 210 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAETRADGNRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNFEY 173 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 109 ERCIACKLCEAVCPAQAITIEAE 131 >gi|158321164|ref|YP_001513671.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141363|gb|ABW19675.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 362 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C+ +CP D +++ + CI CG+C+ CP AI+ Sbjct: 31 DPCTKCRD-----ICPKDAMLLNSGKISMDENLCIGCGLCKAVCPTQAIQ 75 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 6/62 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T+ + E C C C CP + +G L H +C C C C AI+ Sbjct: 251 TWRINEQCNGCGQ--CQSACPNKAWSLEKEDGTLKLYHHAGKCYQCRKCIESCSKKAIEG 308 Query: 58 DT 59 D Sbjct: 309 DD 310 >gi|90578562|ref|ZP_01234372.1| hypothetical iron-sulfur cluster-binding protein [Vibrio angustum S14] gi|90439395|gb|EAS64576.1| hypothetical iron-sulfur cluster-binding protein [Vibrio angustum S14] Length = 551 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 6 TENCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 T +C LC CV VCP + L I D C+ CG+CE CP I + Sbjct: 416 TTDCTLC--MSCVAVCPTRALHAIGDRPGLLFIEED-CVQCGMCEKACPEKVISLEPRFN 472 Query: 63 LEL 65 + Sbjct: 473 WDW 475 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 17/47 (36%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C++ CP +AI P C G C CP +AI Sbjct: 193 CLDACPACALSSDGAEIAIDPYLCQGVGTCATACPTEAITYALPDPQ 239 >gi|91781709|ref|YP_556915.1| ferredoxin [Burkholderia xenovorans LB400] gi|91685663|gb|ABE28863.1| Ferredoxin [Burkholderia xenovorans LB400] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEP 61 I D E Sbjct: 59 IPRDPEH 65 >gi|77917677|ref|YP_355492.1| Fe-S-cluster-containing hydrogenase components 1 [Pelobacter carbinolicus DSM 2380] gi|77543760|gb|ABA87322.1| Fe-S-cluster-containing hydrogenase components 1 [Pelobacter carbinolicus DSM 2380] Length = 198 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 +C C C+ CP + + +P++C C +C CP DAI Sbjct: 57 SCRHCDPAACLSACPAGAITRDPETDAVVQNPEKCQACAMCAMVCPFDAI 106 >gi|78357984|ref|YP_389433.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220389|gb|ABB39738.1| iron-sulfur cluster-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 155 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C CP F + + + CI CG C CPV+AI D E Sbjct: 54 CVACNPAPCATACPTGAFSQRKGGGVKVDRSLCIRCGNCAEACPVEAIYIDPEESF 109 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 15/64 (23%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-----CIDCGVCEPECPVDAIK-PDTEPG 62 CI C +C E CPV+ I P+E CI CG C P CP ++ D + G Sbjct: 86 CIRCG--NCAEACPVEAI-------YIDPEESFPYVCIHCGRCVPFCPHACLELADADEG 136 Query: 63 LELW 66 + + Sbjct: 137 RQEY 140 >gi|15806869|ref|NP_295592.1| polyferredoxin [Deinococcus radiodurans R1] gi|6459648|gb|AAF11421.1|AE002026_9 polyferredoxin, putative [Deinococcus radiodurans R1] Length = 334 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 17 CVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CV+ CP + G + I P+ C CG+C CP A++ D LE Sbjct: 37 CVDACPHEAVTVNAGGYAVEIDPERCTGCGLCVQSCPSGALEYDLLAPLE 86 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 12/69 (17%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VV ++CI C C VCP EG L + C C C CP AI Sbjct: 256 VVDDSCIDC--PVCANVCPTQAITRNLQPEGGVRLLLDLSACTGCMACLRSCPPQAIH-- 311 Query: 59 TEPGLELWL 67 WL Sbjct: 312 ---EQRQWL 317 >gi|78046995|ref|YP_363170.1| ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035425|emb|CAJ23070.1| putative ferredoxin [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 156 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 98 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 151 >gi|326428756|gb|EGD74326.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Salpingoeca sp. ATCC 50818] Length = 209 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 108 ERCIACKL--CEAICPAQAITIETVPREDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 164 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 149 CIFCGF--CQEACPVDAIVEGPNFEY 172 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +T P + Sbjct: 108 ERCIACKLCEAICPAQAITIETVPRED 134 >gi|296241969|ref|YP_003649456.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Thermosphaera aggregans DSM 11486] gi|296094553|gb|ADG90504.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermosphaera aggregans DSM 11486] Length = 636 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 21/62 (33%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C C + CP I + C CG+C CP +AI P Sbjct: 571 VDPEKCTGCLACVNLSACPALVLEPDSRKPVIIEELCAGCGLCASICPFNAISVANTPTQ 630 Query: 64 EL 65 + Sbjct: 631 DW 632 >gi|227535963|ref|ZP_03966012.1| NADH dehydrogenase (quinone) [Sphingobacterium spiritivorum ATCC 33300] gi|300771669|ref|ZP_07081544.1| NADH-quinone oxidoreductase subunit I [Sphingobacterium spiritivorum ATCC 33861] gi|227244206|gb|EEI94221.1| NADH dehydrogenase (quinone) [Sphingobacterium spiritivorum ATCC 33300] gi|300761658|gb|EFK58479.1| NADH-quinone oxidoreductase subunit I [Sphingobacterium spiritivorum ATCC 33861] Length = 174 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 19/78 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 72 ERCTACGL--CALSCPAEAITMTAAERQKGEENLYREEKYAAVYEINMLRCIFCGLCEEA 129 Query: 50 CPVDAIKPDTEPGLELWL 67 CP +AI D +L Sbjct: 130 CPKEAIYLDGPHVTASYL 147 >gi|315230439|ref|YP_004070875.1| RNase L inhibitor [Thermococcus barophilus MP] gi|315183467|gb|ADT83652.1| RNase L inhibitor [Thermococcus barophilus MP] Length = 590 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYKPIIQEASCTGCGICVHKCPFNAI 66 Query: 56 KPDTEPGL 63 P Sbjct: 67 TIVNLPEQ 74 >gi|117626444|ref|YP_859767.1| putative pyruvate-formate lyase-activating enzyme [Escherichia coli APEC O1] gi|115515568|gb|ABJ03643.1| putative pyruvate-formate lyase-activating enzyme [Escherichia coli APEC O1] Length = 305 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +CI C C++ CP N I+ D CI CG C CP A++ Sbjct: 60 DCIRCG--KCIDACPQQALS-TTNAWFINRDRCIQCGKCTEICPTRALE 105 >gi|269849725|sp|Q8X616|YDHX_ECO57 RecName: Full=Uncharacterized ferredoxin-like protein ydhX; Flags: Precursor Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|15676051|ref|NP_273181.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis MC58] gi|59802180|ref|YP_208892.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|121634001|ref|YP_974246.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|194099902|ref|YP_002003039.1| 4Fe-4S ferrodoxin [Neisseria gonorrhoeae NCCP11945] gi|239997905|ref|ZP_04717829.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae 35/02] gi|240015115|ref|ZP_04722028.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae DGI18] gi|240017564|ref|ZP_04724104.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae FA6140] gi|240081707|ref|ZP_04726250.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae FA19] gi|240113983|ref|ZP_04728473.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae MS11] gi|240116719|ref|ZP_04730781.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID18] gi|240118941|ref|ZP_04733003.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID1] gi|240122186|ref|ZP_04735148.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID24-1] gi|240124479|ref|ZP_04737435.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae PID332] gi|240124653|ref|ZP_04737539.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae SK-92-679] gi|240129154|ref|ZP_04741815.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae SK-93-1035] gi|254494740|ref|ZP_05107911.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|254805831|ref|YP_003084052.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|260439522|ref|ZP_05793338.1| putative ferredoxin [Neisseria gonorrhoeae DGI2] gi|261400047|ref|ZP_05986172.1| ferredoxin [Neisseria lactamica ATCC 23970] gi|268593756|ref|ZP_06127923.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268597805|ref|ZP_06131972.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268600048|ref|ZP_06134215.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268602390|ref|ZP_06136557.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268604652|ref|ZP_06138819.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268683110|ref|ZP_06149972.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268683227|ref|ZP_06150089.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268687537|ref|ZP_06154399.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|291042757|ref|ZP_06568498.1| ferredoxin [Neisseria gonorrhoeae DGI2] gi|293398224|ref|ZP_06642429.1| ferredoxin [Neisseria gonorrhoeae F62] gi|304388924|ref|ZP_07370971.1| ferredoxin [Neisseria meningitidis ATCC 13091] gi|313667418|ref|YP_004047702.1| ferredoxin [Neisseria lactamica ST-640] gi|7225340|gb|AAF40582.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis MC58] gi|59719075|gb|AAW90480.1| putative ferredoxin [Neisseria gonorrhoeae FA 1090] gi|120865707|emb|CAM09434.1| putative ferredoxin [Neisseria meningitidis FAM18] gi|193935192|gb|ACF31016.1| ferredoxin, 4Fe-4S bacterial type [Neisseria gonorrhoeae NCCP11945] gi|226513780|gb|EEH63125.1| ferredoxin [Neisseria gonorrhoeae 1291] gi|254669373|emb|CBA08496.1| putative ferredoxin [Neisseria meningitidis alpha14] gi|254671137|emb|CBA08170.1| Ferredoxin [Neisseria meningitidis alpha153] gi|261391661|emb|CAX49109.1| putative ferredoxin [Neisseria meningitidis 8013] gi|268547145|gb|EEZ42563.1| ferredoxin [Neisseria gonorrhoeae 35/02] gi|268551593|gb|EEZ46612.1| ferredoxin [Neisseria gonorrhoeae FA19] gi|268584179|gb|EEZ48855.1| ferredoxin [Neisseria gonorrhoeae MS11] gi|268586521|gb|EEZ51197.1| ferredoxin [Neisseria gonorrhoeae PID18] gi|268588783|gb|EEZ53459.1| ferredoxin [Neisseria gonorrhoeae PID1] gi|268623394|gb|EEZ55794.1| ferredoxin [Neisseria gonorrhoeae PID332] gi|268623511|gb|EEZ55911.1| ferredoxin [Neisseria gonorrhoeae SK-92-679] gi|268627821|gb|EEZ60221.1| ferredoxin [Neisseria gonorrhoeae SK-93-1035] gi|269210270|gb|EEZ76725.1| ferredoxin [Neisseria lactamica ATCC 23970] gi|291013191|gb|EFE05157.1| ferredoxin [Neisseria gonorrhoeae DGI2] gi|291611487|gb|EFF40557.1| ferredoxin [Neisseria gonorrhoeae F62] gi|304337058|gb|EFM03245.1| ferredoxin [Neisseria meningitidis ATCC 13091] gi|309378534|emb|CBX22806.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|313004880|emb|CBN86306.1| putative ferredoxin [Neisseria lactamica 020-06] gi|316985968|gb|EFV64907.1| ferredoxin [Neisseria meningitidis H44/76] gi|317165359|gb|ADV08900.1| putative ferredoxin [Neisseria gonorrhoeae TCDC-NG08107] gi|325133190|gb|EGC55861.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M6190] gi|325135232|gb|EGC57857.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M13399] gi|325138802|gb|EGC61354.1| iron-sulfur cluster-binding protein [Neisseria meningitidis ES14902] gi|325141268|gb|EGC63767.1| iron-sulfur cluster-binding protein [Neisseria meningitidis CU385] gi|325145445|gb|EGC67721.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240013] gi|325197412|gb|ADY92868.1| iron-sulfur cluster-binding protein [Neisseria meningitidis G2136] gi|325199337|gb|ADY94792.1| iron-sulfur cluster-binding protein [Neisseria meningitidis H44/76] gi|325203042|gb|ADY98496.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240149] gi|325203243|gb|ADY98696.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M01-240355] gi|325205216|gb|ADZ00669.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M04-240196] gi|325207160|gb|ADZ02612.1| iron-sulfur cluster-binding protein [Neisseria meningitidis NZ-05/33] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|226939464|ref|YP_002794537.1| NADH dehydrogenase subunit I [Laribacter hongkongensis HLHK9] gi|226714390|gb|ACO73528.1| NuoI [Laribacter hongkongensis HLHK9] Length = 160 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG CE CP DAI Sbjct: 59 ERCIACKL--CEAVCPAMAITIDSEQRADGTRRTTRYEIDYQKCIFCGFCEEACPTDAI 115 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D+E + Sbjct: 59 ERCIACKLCEAVCPAMAITIDSEQRAD 85 >gi|225572038|ref|ZP_03780902.1| hypothetical protein RUMHYD_00332 [Blautia hydrogenotrophica DSM 10507] gi|225040473|gb|EEG50719.1| hypothetical protein RUMHYD_00332 [Blautia hydrogenotrophica DSM 10507] Length = 643 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CP D + + I P++C+ CG C +C AI + Sbjct: 593 DKCKGC--TLCARTCPNDAVIGKVKEPHTIDPNKCVKCGACMEKCRFGAIYKE 643 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I PD+C C +C CP DA+ Sbjct: 590 IDPDKCKGCTLCARTCPNDAV 610 >gi|153808573|ref|ZP_01961241.1| hypothetical protein BACCAC_02869 [Bacteroides caccae ATCC 43185] gi|149128895|gb|EDM20112.1| hypothetical protein BACCAC_02869 [Bacteroides caccae ATCC 43185] Length = 343 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV CP +G+ L + +CI C C CP +A DT Sbjct: 276 CTHCGL--CVVHCPAGAITKGDE-LNVDETKCIKCCACVKVCPRNAKVYDTP 324 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 10/27 (37%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 C CG+C CP AI E Sbjct: 270 VKDESLCTHCGLCVVHCPAGAITKGDE 296 >gi|85858317|ref|YP_460519.1| methyl-viologen-reducing hydrogenase subunit delta [Syntrophus aciditrophicus SB] gi|85859241|ref|YP_461443.1| methyl-viologen-reducing hydrogenase subunit delta [Syntrophus aciditrophicus SB] gi|85721408|gb|ABC76351.1| methyl-viologen-reducing hydrogenase, delta subunit [Syntrophus aciditrophicus SB] gi|85722332|gb|ABC77275.1| methyl-viologen-reducing hydrogenase, delta subunit [Syntrophus aciditrophicus SB] Length = 243 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECP--VDAI 55 Y+ E C C C CP+D + + I D+CI CG C CP AI Sbjct: 162 YIDPEKCQAC--MTCARRCPMDAIISAKKEVHIIEQDKCIRCGACFAACPPQFSAI 215 Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 12/79 (15%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEP----GLELWLKINSEYATQWPNITT------ 82 I P++C C C CP+DAI + + ++ + +A P + Sbjct: 161 YYIDPEKCQACMTCARRCPMDAIISAKKEVHIIEQDKCIRCGACFAACPPQFSAIVKLVG 220 Query: 83 --KKESLPSAAKMDGVKQK 99 LP + K K Sbjct: 221 QPAPPPLPEGQRAVVKKSK 239 >gi|82702149|ref|YP_411715.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] gi|110287762|sp|Q2YA98|NUOI1_NITMU RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|82410214|gb|ABB74323.1| NADH dehydrogenase subunit I [Nitrosospira multiformis ATCC 25196] Length = 171 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 12/74 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC F I+ CI CG CE CP DAI+ Sbjct: 49 ERCVACYL--CAAACPVDCIALQATEDEHERRYPEFFRINFSRCIFCGFCEEACPTDAIQ 106 Query: 57 PDTEPGLELWLKIN 70 + + + + N Sbjct: 107 LTPDFEMGEYNRKN 120 >gi|51596492|ref|YP_070683.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis IP 32953] gi|145598187|ref|YP_001162263.1| electron transport complex protein RnfB [Yersinia pestis Pestoides F] gi|153949540|ref|YP_001400870.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis IP 31758] gi|170024242|ref|YP_001720747.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis YPIII] gi|186895542|ref|YP_001872654.1| electron transport complex protein RnfB [Yersinia pseudotuberculosis PB1/+] gi|51589774|emb|CAH21404.1| putative iron-sulfur protein [Yersinia pseudotuberculosis IP 32953] gi|145209883|gb|ABP39290.1| iron-sulfur protein [Yersinia pestis Pestoides F] gi|152961035|gb|ABS48496.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis IP 31758] gi|169750776|gb|ACA68294.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis YPIII] gi|186698568|gb|ACC89197.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pseudotuberculosis PB1/+] Length = 207 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 163 >gi|328474734|gb|EGF45539.1| nitrite reductase Fe-S protein NrfC [Vibrio parahaemolyticus 10329] Length = 228 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H + C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCLAACPYQ 143 >gi|307720678|ref|YP_003891818.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978771|gb|ADN08806.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 187 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C C EVCP Y EN + ++ D+CI C C CP DA D Sbjct: 64 CQHCDDAPCEEVCPTHATYYDENGVVRVNADKCILCSYCMNACPYDARYVDDR 116 >gi|251792841|ref|YP_003007567.1| electron transport complex protein RnfB [Aggregatibacter aphrophilus NJ8700] gi|247534234|gb|ACS97480.1| electron transport complex protein RnfB [Aggregatibacter aphrophilus NJ8700] Length = 197 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I PD C C +C CP I Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIIGSNKAMHTIIPDLCTGCELCVAPCPTSCI 159 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 13/28 (46%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAI 55 IH D CI C C CPVDAI Sbjct: 102 PAPKVAFIHEDMCIGCTKCIQACPVDAI 129 >gi|257791834|ref|YP_003182440.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317489834|ref|ZP_07948331.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325830006|ref|ZP_08163464.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] gi|257475731|gb|ACV56051.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316911083|gb|EFV32695.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325488173|gb|EGC90610.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] Length = 261 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVD 53 V+ C C + CVE CPV + + +CI C C CP Sbjct: 105 VMQNQCRQCPYPSCVEACPVGAMHADPETGVRLVDEGKCIGCERCVEACPFT 156 >gi|219871791|ref|YP_002476166.1| electron transport complex protein RnfB [Haemophilus parasuis SH0165] gi|219691995|gb|ACL33218.1| electron transport complex protein RnfB/NADH:ubiquinone oxidoreductase, subunit RnfB [Haemophilus parasuis SH0165] Length = 202 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ E CI C T C+ CPVD + + D C C +C CP D I+ Sbjct: 108 AYIHEELCIGC--TKCIAACPVDAIVGTNKAMHTVIADFCTGCELCVAPCPTDCIE 161 >gi|209525025|ref|ZP_03273569.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] gi|209494434|gb|EDZ94745.1| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [Arthrospira maxima CS-328] Length = 1192 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 37/113 (32%) Query: 6 TENCILCKHTDCVEVCPVDCF--------------------------YEGENFLA-IHPD 38 + C+ C C+ VCP +EG+ F + P+ Sbjct: 687 ADVCVQCG--KCIMVCPHAVIRGKAYDESALNGAPETFKTTAVRDKAFEGQKFTIQVSPE 744 Query: 39 ECIDCGVCEPECPV--------DAIKPDTEPGLELWLKINSEYATQWPNITTK 83 +C CGVC CP AI +++P + + N E+ PN + Sbjct: 745 DCTGCGVCVDVCPAKNKSMPSKKAINMESQPPIRATERENWEFFLNLPNPDRR 797 >gi|206895457|ref|YP_002246544.1| ferredoxin 2 [Coprothermobacter proteolyticus DSM 5265] gi|206738074|gb|ACI17152.1| ferredoxin 2 [Coprothermobacter proteolyticus DSM 5265] Length = 450 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C T+C++ CP + I CIDCG C CP A Sbjct: 17 EKCKGC--TNCIKRCPAEAIRVRNGKARIIDQLCIDCGECIRACPNHA 62 Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + ++C C C CP +AI+ Sbjct: 14 LDEEKCKGCTNCIKRCPAEAIR 35 >gi|158522645|ref|YP_001530515.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511471|gb|ABW68438.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 392 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C C CV C + E + +CI CG+C C AI+ + + Sbjct: 299 DACNGCGV--CVRRCQMGAIEVKEKKAHLDVGKCIGCGLCVTTCKTGAIRLEKK 350 >gi|397906|emb|CAA48368.1| NADH dehydrogenase I, subunit nuoI [Escherichia coli] Length = 179 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 114 Query: 57 PDTEPGLELW 66 + + + Sbjct: 115 LTPDFEMGEY 124 >gi|46201666|ref|ZP_00208197.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 233 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 + V C C CV+VCP + + + CI C C CP A Sbjct: 89 AHSVPVMCQHCAKPACVDVCPTGASMKRADGIVLVDRHICIGCRYCMMACPYKA 142 >gi|237800535|ref|ZP_04588996.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023395|gb|EGI03452.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. oryzae str. 1_6] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMADF 127 >gi|218782788|ref|YP_002434106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764172|gb|ACL06638.1| MvH Hase/Heterodisulfide reductase, subunit A-like protein [Desulfatibacillum alkenivorans AK-01] Length = 1021 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 11/56 (19%) Query: 5 VTENCILCKHTDCVEVCPVDCFY----EGEN-----FLAIHPDECIDCGVCEPECP 51 VTE+C C CV+VCP GE+ + + P C CGVC CP Sbjct: 938 VTEHCDGC--ALCVDVCPYRAIRLQESTGEDGRMHRMIQVDPALCKGCGVCAATCP 991 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 25/83 (30%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEGEN---------------FLAIHPDECI--- 41 YV + CI C C E CP D F EG N AI P+ CI Sbjct: 104 YVDMDKCIACGL--CAEKCPRPVADEFNEGVNNRKAIYIKYGQSVPLKYAIDPNACIYLT 161 Query: 42 --DCGVCEPECPVDAIKPDTEPG 62 C CE CP AI + + Sbjct: 162 RGKCRACEKFCPTGAINFEDKAE 184 >gi|83591098|ref|YP_431107.1| thiamine pyrophosphate enzyme [Moorella thermoacetica ATCC 39073] gi|83574012|gb|ABC20564.1| Thiamine pyrophosphate enzyme [Moorella thermoacetica ATCC 39073] Length = 631 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 3 YVVT-ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y V+ +NC+ C++ C+++ CP + I P C CG+C CP +AI+ E Sbjct: 573 YAVSPDNCLSCRY--CLDLGCP--AISFSDGHGVIDPVLCNGCGLCTQVCPGEAIRKAGE 628 Query: 61 PGL 63 Sbjct: 629 EDE 631 >gi|78357324|ref|YP_388773.1| ferredoxin hydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219729|gb|ABB39078.1| Ferredoxin hydrogenase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 439 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-GENFL--AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + C+ C +C CP E E+ + P C++CG C CP AI + Sbjct: 54 DKCMACG--ECEYHCPTGVMQEVTEDGYRGVVDPVACVNCGQCLANCPFGAIHEEVSFVG 111 Query: 64 ELWLKI 69 EL+ K+ Sbjct: 112 ELYEKL 117 Score = 37.4 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 P D F+ + D+C+ CG CE CP ++ TE G Sbjct: 38 PKDVDPATIRFVEVDHDKCMACGECEYHCPTGVMQEVTEDGYR 80 >gi|54308453|ref|YP_129473.1| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum SS9] gi|46912882|emb|CAG19671.1| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum SS9] Length = 230 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPV 52 +C C + CV VCP ++ + + + P +C+ CG C CP Sbjct: 98 SCQHCDNAPCVHVCPTGASFKDPDTGIVDVDPFKCVGCGYCLAACPY 144 >gi|299470484|emb|CBN78476.1| NUOI homolog, NADH dehydrogenase (ubiquinone) subunit [Ectocarpus siliculosus] Length = 236 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 135 ERCISCKL--CEAICPAQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQEACPVDAI 191 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 135 ERCISCKLCEAICPAQAITIEAEQRED 161 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG N+ Sbjct: 176 CIYCGF--CQEACPVDAIVEGPNY 197 >gi|283853098|ref|ZP_06370353.1| NADH dehydrogenase (quinone) [Desulfovibrio sp. FW1012B] gi|283571496|gb|EFC19501.1| NADH dehydrogenase (quinone) [Desulfovibrio sp. FW1012B] Length = 491 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +TY + C C T C +VCPV+C + I +CI CG C +C D+I Sbjct: 434 LTYTIDPAKCTGC--TLCTKVCPVECISGTKKQPHTIDATKCIKCGACYDKCKFDSI 488 >gi|257095311|ref|YP_003168952.1| NADH dehydrogenase subunit I [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047835|gb|ACV37023.1| NADH-quinone oxidoreductase, chain I [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP + I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAMAITIESDQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI 117 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 61 ERCIACKLCEAVCPAMAITIESDQRDD 87 >gi|261402870|ref|YP_003247094.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus vulcanius M7] gi|261369863|gb|ACX72612.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus vulcanius M7] Length = 617 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V ENC C C EVC ++ + + CI CG C CP +A Sbjct: 490 VNEENCNGCG--RCAEVCKIEAIDIRGEMSYTNYNVCIGCGKCIKNCPNEA 538 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 4/47 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C CV D G + ++ + C CG C C ++AI Sbjct: 468 CPNC----CVRPQIHDVGIVGVKYPKVNEENCNGCGRCAEVCKIEAI 510 >gi|291287233|ref|YP_003504049.1| hypothetical protein Dacet_1321 [Denitrovibrio acetiphilus DSM 12809] gi|290884393|gb|ADD68093.1| protein of unknown function DUF362 [Denitrovibrio acetiphilus DSM 12809] Length = 360 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ E CILC C++ CPVD +F + +CI+C C C DA+ Sbjct: 297 VLNEKCILC--MLCMKSCPVDAIAVINDFPFVDKKKCIECFCCHEVCESDAV 346 >gi|190358907|sp|A8F2T4|NUOI_RICM5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I Length = 159 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQAACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C CPVD EG NF Sbjct: 99 CIYCGL--CQAACPVDAIVEGPNF 120 >gi|288856257|ref|NP_001165784.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Nasonia vitripennis] Length = 201 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 100 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 156 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 100 ERCIACKLCEAICPAQAITIEAEERAD 126 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 141 CIYCGF--CQEACPVDAIVEGPNF 162 >gi|152982452|ref|YP_001353663.1| iron-sulfur binding protein [Janthinobacterium sp. Marseille] gi|151282529|gb|ABR90939.1| iron-sulfur binding protein [Janthinobacterium sp. Marseille] Length = 699 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M V ++C LC CV CP + N L C+ CG+CE CP +AI Sbjct: 560 MVMVNKDSCTLC--MSCVGACPESALTDNANMPQLRFIEKNCVQCGLCEKTCPENAI 614 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C T C++VC + + + ++P+ C+ CG C CP A Sbjct: 322 VGC--TACIDVCSAEAVSHHGDQIKVNPNLCVGCGACTTVCPSGA 364 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 16/39 (41%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + ++ D C C C CP A+ + +++ N Sbjct: 560 MVMVNKDSCTLCMSCVGACPESALTDNANMPQLRFIEKN 598 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + C C C CP +AI Sbjct: 196 IDLEACTRCNACVDVCPENAI 216 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 6/50 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC-PVDAI 55 E C C CV+VCP + + I +C C C + AI Sbjct: 199 EACTRCN--ACVDVCPENAI---DLTYQIDLSKCKSHRDCVKACGTIGAI 243 >gi|78357433|ref|YP_388882.1| dissimilatory sulfite reductase subunit alpha and beta-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219838|gb|ABB39187.1| Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 215 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C C CP D G A P CIDCG C CP A Sbjct: 95 DVCTGCG--RCAAACPDDAIDMGSGVPAFDPLRCIDCGQCLLRCPEKA 140 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 8/46 (17%) Query: 18 VEVCPVDCFYE-GENFLAI-------HPDECIDCGVCEPECPVDAI 55 V CP C + I H D C CG C CP DAI Sbjct: 67 VSGCPNGCARPHIADMGFISVCTPGVHQDVCTGCGRCAAACPDDAI 112 >gi|89893347|ref|YP_516834.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|89332795|dbj|BAE82390.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] Length = 190 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 + ++ C C + +C+ VCP + + + + +H PD+C C C CP A + Sbjct: 60 FFLSTACNHCANPECLRVCPYGAYAKRRDGIVLHFPDKCGSCKSCVASCPFGAPQ 114 >gi|115523011|ref|YP_779922.1| thiamine pyrophosphate binding domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516958|gb|ABJ04942.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Rhodopseudomonas palustris BisA53] Length = 605 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +VTE C C C+ + CP D ++EG + + I P CI C +C C +D IKP Sbjct: 543 IVTEQCTAC--QSCMNLGCPALTWSDQWFEGRHRVQIDPALCIGCTLCAQVCTIDCIKPT 600 Query: 59 TE 60 Sbjct: 601 AP 602 >gi|239624920|ref|ZP_04667951.1| dihydroorotate dehydrogenase [Clostridiales bacterium 1_7_47_FAA] gi|239521306|gb|EEQ61172.1| dihydroorotate dehydrogenase [Clostridiales bacterium 1_7_47FAA] Length = 362 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C C CP + + D+C CG+CE CP AI Sbjct: 311 EACTGCGL--CERNCPYFALEMRDKKPFVDNDKCFGCGLCESRCPAQAI 357 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 16/35 (45%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ I + C CG+CE CP A++ + Sbjct: 302 TPSYPVIDREACTGCGLCERNCPYFALEMRDKKPF 336 >gi|213619042|ref|ZP_03372868.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 53 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 98 >gi|219853289|ref|YP_002467721.1| methanogenesis marker 16 metalloprotein [Methanosphaerula palustris E1-9c] gi|219547548|gb|ACL17998.1| methanogenesis marker 16 metalloprotein [Methanosphaerula palustris E1-9c] Length = 414 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 10/57 (17%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP-------VDAIKPD 58 C+ C+ +CP G I D C++CG C CP + AI + Sbjct: 320 CVHCETCRAATLCPTGAISPGA---VIDRDRCVNCGTCVQVCPGPAFSGILGAITYE 373 >gi|194434710|ref|ZP_03066963.1| iron-sulfur cluster-binding protein [Shigella dysenteriae 1012] gi|194417048|gb|EDX33164.1| iron-sulfur cluster-binding protein [Shigella dysenteriae 1012] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWRDEQGSVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|167772706|ref|ZP_02444759.1| hypothetical protein ANACOL_04088 [Anaerotruncus colihominis DSM 17241] gi|167665184|gb|EDS09314.1| hypothetical protein ANACOL_04088 [Anaerotruncus colihominis DSM 17241] Length = 172 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 2/54 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKP 57 + C C C+ CPV C + CI C C CP A + Sbjct: 57 SSACNHCADAPCIAACPVGCIKKDPKTGMTIYDNHNCIGCKSCAMACPFGAPRY 110 >gi|169634174|ref|YP_001707910.1| NADH dehydrogenase subunit I [Acinetobacter baumannii SDF] gi|169797051|ref|YP_001714844.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AYE] gi|184157036|ref|YP_001845375.1| NADH dehydrogenase subunit I [Acinetobacter baumannii ACICU] gi|239501287|ref|ZP_04660597.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB900] gi|260551026|ref|ZP_05825231.1| NADH-quinone oxidoreductase subunit I [Acinetobacter sp. RUH2624] gi|260555657|ref|ZP_05827877.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter baumannii ATCC 19606] gi|301347787|ref|ZP_07228528.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB056] gi|301510622|ref|ZP_07235859.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB058] gi|301595907|ref|ZP_07240915.1| NADH dehydrogenase subunit I [Acinetobacter baumannii AB059] gi|332852140|ref|ZP_08433967.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013150] gi|332867539|ref|ZP_08437692.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013113] gi|332872611|ref|ZP_08440579.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6014059] gi|156632697|sp|A3M2Q5|NUOI_ACIBT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737380|sp|B2HU48|NUOI_ACIBC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737381|sp|B0VU49|NUOI_ACIBS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737382|sp|B0V894|NUOI_ACIBY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|169149978|emb|CAM87872.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter baumannii AYE] gi|169152966|emb|CAP02012.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter baumannii] gi|183208630|gb|ACC56028.1| Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Acinetobacter baumannii ACICU] gi|193076541|gb|ABO11199.2| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii ATCC 17978] gi|260405974|gb|EEW99461.1| NADH-quinone oxidoreductase subunit I [Acinetobacter sp. RUH2624] gi|260410568|gb|EEX03866.1| NADH-plastoquinone oxidoreductase, I subunit [Acinetobacter baumannii ATCC 19606] gi|332729512|gb|EGJ60851.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013150] gi|332733956|gb|EGJ65101.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6013113] gi|332739140|gb|EGJ69999.1| NADH-quinone oxidoreductase subunit I [Acinetobacter baumannii 6014059] Length = 180 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 LTPDFELGEYV 126 >gi|152995553|ref|YP_001340388.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Marinomonas sp. MWYL1] gi|150836477|gb|ABR70453.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Marinomonas sp. MWYL1] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ + CI C C CP D G I PD+C +C C CP+D Sbjct: 1 MALLINDRCINCD--MCEPECPNDAITMGAKIYVIDPDKCTECVGHYDQPTCVAVCPIDC 58 Query: 55 IKPD 58 +KPD Sbjct: 59 VKPD 62 >gi|104782528|ref|YP_609026.1| NADH dehydrogenase subunit I [Pseudomonas entomophila L48] gi|123255480|sp|Q1I7Z3|NUOI_PSEE4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|95111515|emb|CAK16235.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Pseudomonas entomophila L48] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|127514085|ref|YP_001095282.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella loihica PV-4] gi|126639380|gb|ABO25023.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella loihica PV-4] Length = 230 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C+ CV VCP + +A++ D C+ C C CP I P+T Sbjct: 98 SCQHCEAAPCVRVCPTGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETRTAD 157 Query: 64 E 64 + Sbjct: 158 K 158 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 24/66 (36%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHP-----DECIDCG----------VCEP 48 V ++ C+ C++ C+ CP IHP D+C C C Sbjct: 127 VNSDRCVGCQY--CIAACPYQV-------RYIHPETRTADKCDFCQKSRLAQGLQPACVE 177 Query: 49 ECPVDA 54 CP A Sbjct: 178 ACPTKA 183 >gi|116623297|ref|YP_825453.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226459|gb|ABJ85168.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 247 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 1/63 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C+ C VCPV + D+C+ C C CP + L Sbjct: 60 CMNCQQPACASVCPVGALQKTALGPVTYDADKCMGCRYCMQACPFQVPSYEWNQRLPKMR 119 Query: 68 KIN 70 K N Sbjct: 120 KCN 122 >gi|237749425|ref|ZP_04579905.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380787|gb|EEO30878.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 274 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 +NC +C C ++CPV+ + + + CI CG C CP Sbjct: 199 GDNCSVCG--TCADICPVEAITLTDVSTSTDENLCISCGACISVCP 242 Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 11/18 (61%) Query: 38 DECIDCGVCEPECPVDAI 55 D C CG C CPV+AI Sbjct: 200 DNCSVCGTCADICPVEAI 217 >gi|156039527|ref|XP_001586871.1| hypothetical protein SS1G_11900 [Sclerotinia sclerotiorum 1980] gi|154697637|gb|EDN97375.1| hypothetical protein SS1G_11900 [Sclerotinia sclerotiorum 1980 UF-70] Length = 229 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 186 ESP----------NAEYATETREELLYNKEKLLANGDKWE 215 >gi|157376057|ref|YP_001474657.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318431|gb|ABV37529.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 211 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + C C CV+ CPV ++ + + + D CI C C CP DA + D Sbjct: 63 AYYTSIGCNHCSEPACVKACPVGAMHKRKQDGLVHVASDLCIGCESCARACPYDAPQID 121 >gi|89074883|ref|ZP_01161333.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium sp. SKA34] gi|89049280|gb|EAR54843.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium sp. SKA34] Length = 551 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Query: 6 TENCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 T +C LC CV VCP L I D C+ CG+CE CP I + Sbjct: 416 TTDCTLC--MSCVAVCPTRALHAIGNRPGLLFIEED-CVQCGMCEKACPEKVISLEPRFN 472 Query: 63 LEL 65 + Sbjct: 473 WDW 475 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 17/47 (36%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C++ CP +AI P C G C CP +AI Sbjct: 193 CLDACPAGALSSDGVEVAIDPYLCQGVGSCATACPTEAITYALPDPQ 239 >gi|303247133|ref|ZP_07333408.1| response regulator receiver protein [Desulfovibrio fructosovorans JJ] gi|302491559|gb|EFL51444.1| response regulator receiver protein [Desulfovibrio fructosovorans JJ] Length = 1162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 23/82 (28%), Gaps = 20/82 (24%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDC 43 +V C+ C C +VCPV E N + D C C Sbjct: 110 PFVDATKCVGCG--ACAKVCPVSVPNEFNAGLTSRGAVYLPVPHAIPNHYVVDLDACQRC 167 Query: 44 GVCEPECPVDAIKPDTEPGLEL 65 C CP AI + Sbjct: 168 WQCYEACPTGAIDFKLDERERH 189 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 9/85 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C C++VCP + + C CG C CP A ++ Sbjct: 1080 CTRCG--KCLDVCPYGARTLDTEHDRIVVDDILCQGCGSCASACPNSASFIRGFSDRQVL 1137 Query: 67 LKINSEYATQWPNITTKKESLPSAA 91 I++ A ++ + P+ Sbjct: 1138 SVIDAALA-----VSGRPAPAPATD 1157 >gi|238921030|ref|YP_002934545.1| cytochrome c nitrite reductase, Fe-S protein, [Edwardsiella ictaluri 93-146] gi|238870599|gb|ACR70310.1| cytochrome c nitrite reductase, Fe-S protein, putative [Edwardsiella ictaluri 93-146] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV CP F + + + + PD C+ C C CP Sbjct: 91 SCQHCDDAPCVNACPTGASFRDAASGIVDVDPDLCVGCQYCIAACPY 137 >gi|307153522|ref|YP_003888906.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7822] gi|306983750|gb|ADN15631.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7822] Length = 533 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M Y + +NC C C CP + + I C DC C +CP+ + Sbjct: 1 MPYTIPDNCFGCG--TCQPQCPTGAIHVDDGRYWIESGLCNDCNEYSGEPQCVVQCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PIP 61 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 PD C CG C+P+CP AI D W++ Sbjct: 1 MPYTIPDNCFGCGTCQPQCPTGAIHVD---DGRYWIE 34 >gi|167821535|ref|ZP_02453215.1| iron-sulfur cluster protein [Burkholderia pseudomallei 91] Length = 246 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 83 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 136 >gi|90423913|ref|YP_532283.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisB18] gi|115502509|sp|Q215H2|NUOI1_RHOPB RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|90105927|gb|ABD87964.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisB18] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 41 PISPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIEAGP 83 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGL--CQEACPVDAIVEGPNF 123 >gi|332702632|ref|ZP_08422720.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552781|gb|EGJ49825.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 263 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + CV+ CP + I CI CG C CP A Sbjct: 61 ACMHCDNPTCVQACPTGATWKDPATGMVEIDRGLCIGCGNCIAACPYGA 109 >gi|330892471|gb|EGH25132.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. mori str. 301020] Length = 179 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMADF 127 >gi|317180082|dbj|BAJ57868.1| ferredoxin [Helicobacter pylori F32] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ +V + CI C C E CP + EG+ I PD C +C C CPVDA Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDA 58 Query: 55 IKPD 58 I PD Sbjct: 59 ILPD 62 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|220917951|ref|YP_002493255.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955805|gb|ACL66189.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Anaeromyxobacter dehalogenans 2CP-1] Length = 748 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C+ CP +G L H D CI G C ECPV AI+ Sbjct: 61 CIG--SLSCLRACPEGDILGIVDGAAKLV-HADHCIGHGRCAAECPVGAIR 108 >gi|197123161|ref|YP_002135112.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Anaeromyxobacter sp. K] gi|196173010|gb|ACG73983.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Anaeromyxobacter sp. K] Length = 745 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C+ CP +G L H D CI G C ECPV AI+ Sbjct: 61 CIG--SLSCLRACPEGDILGIVDGAAKLV-HADHCIGHGRCAAECPVGAIR 108 >gi|86159089|ref|YP_465874.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775600|gb|ABC82437.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Anaeromyxobacter dehalogenans 2CP-C] Length = 748 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C+ CP +G L H D CI G C ECPV AI+ Sbjct: 61 CIG--SLSCLRACPEGDILGIVDGAAKLV-HADHCIGHGRCAAECPVGAIR 108 >gi|330445943|ref|ZP_08309595.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490134|dbj|GAA04092.1| 4Fe-4S binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 551 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Query: 6 TENCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 T++C LC CV VCP + L I D C+ CG+CE CP I + Sbjct: 416 TKDCTLC--MSCVAVCPTRALHAIGDRPGLLFIEED-CVQCGMCEKACPEKVISLEPRFN 472 Query: 63 LEL 65 + Sbjct: 473 WDW 475 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 17/47 (36%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+E CP +AI P C G C CP +AI Sbjct: 193 CLEACPAGALSSDGVEIAIDPYLCQGVGTCATACPTEAITYALPDPQ 239 >gi|310659325|ref|YP_003937046.1| cobyrinic acid a,c-diamide synthase [Clostridium sticklandii DSM 519] gi|308826103|emb|CBH22141.1| Cobyrinic acid a,c-diamide synthase [Clostridium sticklandii] Length = 295 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +E CI C C+E C D E E+ ++P C C +CE CPV+AI + + EL Sbjct: 66 SEKCINCGL--CMEKCRFDAI-ENESDYKVNPFACEGCSLCEYVCPVNAIIMNKDVAGEL 122 Query: 66 WL 67 L Sbjct: 123 ML 124 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 23/38 (60%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 G N I ++CI+CG+C +C DAI+ +++ + + Sbjct: 58 GMNKAVIDSEKCINCGLCMEKCRFDAIENESDYKVNPF 95 >gi|312072386|ref|XP_003139042.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Loa loa] gi|307765791|gb|EFO25025.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Loa loa] Length = 206 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEARPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 161 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 146 CIYCGL--CQEACPVDAIVEGPNFEY 169 Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 105 ERCIACKLCEAICPAQAITIEAEA 128 >gi|258404666|ref|YP_003197408.1| electron transport complex, RnfABCDGE type, B subunit [Desulfohalobium retbaense DSM 5692] gi|257796893|gb|ACV67830.1| electron transport complex, RnfABCDGE type, B subunit [Desulfohalobium retbaense DSM 5692] Length = 286 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C + C + CP + + P +C CG C CP ++ G Sbjct: 215 CIGC--SKCKKECPEEAITMDNFLAVVDPAKCTGCGACIEVCPTGVMRSLLPEGQHPMHA 272 Query: 69 INSEYATQ 76 + SE A++ Sbjct: 273 VQSETASE 280 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Query: 17 CVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 CV+ CP D Y +N L + P +C CG C CP Sbjct: 146 CVKNCPFDAMYMQDNGLPGVDPVKCTGCGKCVEICP 181 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 18/66 (27%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL----------------AIHPDECIDCGVCEPECPV 52 C C CVE+CP D ++ CI C C+ ECP Sbjct: 170 CTGCG--KCVEICPRDIPKLTPESQSTACLCCSHDMGKVVKSVCSAGCIGCSKCKKECPE 227 Query: 53 DAIKPD 58 +AI D Sbjct: 228 EAITMD 233 >gi|261378974|ref|ZP_05983547.1| ferredoxin [Neisseria cinerea ATCC 14685] gi|296315172|ref|ZP_06865113.1| ferredoxin [Neisseria polysaccharea ATCC 43768] gi|269144589|gb|EEZ71007.1| ferredoxin [Neisseria cinerea ATCC 14685] gi|296837981|gb|EFH21919.1| ferredoxin [Neisseria polysaccharea ATCC 43768] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPSLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|195454170|ref|XP_002074119.1| GK14477 [Drosophila willistoni] gi|194170204|gb|EDW85105.1| GK14477 [Drosophila willistoni] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|86158429|ref|YP_465214.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774940|gb|ABC81777.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 298 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C CPV + + +P+ C+ C C CP D K + Sbjct: 104 CMHCLAPACASACPVKAMTKSPEGPVVYNPNRCMGCRYCMIACPFDVPKYE 154 >gi|17864306|ref|NP_524719.1| NADH:ubiquinone reductase 23kD subunit precursor [Drosophila melanogaster] gi|7300064|gb|AAF55234.1| NADH:ubiquinone reductase 23kD subunit precursor [Drosophila melanogaster] gi|16768338|gb|AAL28388.1| GM02062p [Drosophila melanogaster] gi|220942892|gb|ACL83989.1| ND23-PA [synthetic construct] gi|220953000|gb|ACL89043.1| ND23-PA [synthetic construct] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|114564289|ref|YP_751803.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335582|gb|ABI72964.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 211 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + D CI C C CP DA + D Sbjct: 63 AYYMSIACNHCSEPVCVKACPTGAMHKRREDGLVHVAADLCIGCESCARACPYDAPQIDK 122 Query: 60 E 60 + Sbjct: 123 D 123 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 13/62 (20%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVD 53 +V + CI C+ C CP D ++ + +C C C CP+ Sbjct: 97 HVAADLCIGCE--SCARACPYDAPQIDKDRKVM--TKCDGCFERLAEGKQPSCVESCPMR 152 Query: 54 AI 55 AI Sbjct: 153 AI 154 >gi|284007516|emb|CBA73012.1| Electron transport complex protein rnfB [Arsenophonus nasoniae] Length = 204 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ NCI C T C++ CPVD L + D C C +C CP D I Sbjct: 108 AFIDEANCIGC--TKCIQACPVDAIVGTTRALHTVVEDLCTGCDLCVAPCPTDCI 160 >gi|229591260|ref|YP_002873379.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens SBW25] gi|312961693|ref|ZP_07776191.1| NADH-quinone oxidoreductase, chain I [Pseudomonas fluorescens WH6] gi|229363126|emb|CAY50146.1| NADH Dehydrogenase I chain I [Pseudomonas fluorescens SBW25] gi|311283952|gb|EFQ62535.1| NADH-quinone oxidoreductase, chain I [Pseudomonas fluorescens WH6] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|224372257|ref|YP_002606629.1| ferredoxin [Nautilia profundicola AmH] gi|223588828|gb|ACM92564.1| ferredoxin [Nautilia profundicola AmH] Length = 85 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ E CI C CV+ CP + I PD C +C C CPVDA Sbjct: 1 MSLMINEECIACD--ACVDECPNGAIEPADPIYEIDPDLCTECIEHGGEPQCVQVCPVDA 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|152972444|ref|YP_001337590.1| putative electron transport protein Fe-S center [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897038|ref|YP_002921784.1| electron transport protein [Klebsiella pneumoniae NTUH-K2044] gi|330002346|ref|ZP_08304309.1| electron transport protein HydN [Klebsiella sp. MS 92-3] gi|150957293|gb|ABR79323.1| putative electron transport protein Fe-S center [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549366|dbj|BAH65717.1| electron transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328537331|gb|EGF63583.1| electron transport protein HydN [Klebsiella sp. MS 92-3] Length = 161 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 16/47 (34%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + CI C C CP A Sbjct: 57 ACRQCEDAPCASVCPQGAIQRDNDVWWVDQRRCIGCKSCMVACPYGA 103 >gi|84489021|ref|YP_447253.1| Fe-S center containing protein [Methanosphaera stadtmanae DSM 3091] gi|84372340|gb|ABC56610.1| predicted Fe-S center containing protein [Methanosphaera stadtmanae DSM 3091] Length = 367 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 10 ILCKHTD-CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I C + C++ CP + + I+ ++CI C C CP +AIK + + E +++ Sbjct: 194 IACLACNVCIDACPENAITV-DTHAHINYEKCIGCNDCIGACPKNAIKLN-KINSEEFIE 251 Query: 69 INSEYA 74 EYA Sbjct: 252 SMMEYA 257 >gi|70731263|ref|YP_261004.1| NADH dehydrogenase subunit I [Pseudomonas fluorescens Pf-5] gi|110287766|sp|Q4K9S9|NUOI_PSEF5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|68345562|gb|AAY93168.1| NADH-quinone oxidoreductase, I subunit [Pseudomonas fluorescens Pf-5] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|323702072|ref|ZP_08113740.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] gi|323532954|gb|EGB22825.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] Length = 627 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 5/64 (7%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNI 80 CP + I P++C C +C CP AI + + +IN E + Sbjct: 561 CPAGA-CQALKEYYIDPEKCKGCTLCSRVCPAGAITGEKKQPH----EINVELCLKCGTC 615 Query: 81 TTKK 84 K Sbjct: 616 AEKC 619 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ E C C T C VCP E + I+ + C+ CG C +C AI Sbjct: 573 YIDPEKCKGC--TLCSRVCPAGAITGEKKQPHEINVELCLKCGTCAEKCKFGAI 624 >gi|320352432|ref|YP_004193771.1| putative sulfite reductase-associated electron transfer protein DsrO [Desulfobulbus propionicus DSM 2032] gi|320120934|gb|ADW16480.1| putative sulfite reductase-associated electron transfer protein DsrO [Desulfobulbus propionicus DSM 2032] Length = 275 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CV CP + E+ + + CI C C CP + + Sbjct: 136 CNHCDNPPCVRACPTKATFRSEDGIIGMDYHRCIGCRFCMAACPYGSRSFNWRDPRSFIT 195 Query: 68 KINSEYATQWPNITTKK 84 IN +Y + + K Sbjct: 196 DINRDYPARTRGVVEKC 212 >gi|309811972|ref|ZP_07705738.1| formate dehydrogenase-N subunit beta [Dermacoccus sp. Ellin185] gi|308434030|gb|EFP57896.1| formate dehydrogenase-N subunit beta [Dermacoccus sp. Ellin185] Length = 408 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++ CP + E + + D C CG C CP I+ Sbjct: 222 SDVCKHCTHAGCLDNCPTGALFRTEFGTVVVQADVCNGCGYCVGGCPFGVIE 273 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 14/72 (19%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDC---------GVCEPECP 51 V + C C + CV CP E + + +C C C CP Sbjct: 252 VQADVCNGCGY--CVGGCPFGVIERREKTATVNHGNAQKCTLCYDRLKEGQTPACAQTCP 309 Query: 52 VDAIKPDTEPGL 63 +IK T + Sbjct: 310 TTSIKFGTHAEM 321 >gi|296273781|ref|YP_003656412.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296097955|gb|ADG93905.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Arcobacter nitrofigilis DSM 7299] Length = 84 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C E CP EG+ I D C +C C CPVD Sbjct: 1 MSLIITDECIACD--ACREECPNMAIEEGDPIYIIDSDRCTECVGHYEEPACVEVCPVDC 58 Query: 55 IKPDTEPGLELWLKI 69 I D E ++ Sbjct: 59 IIVD-PDNQETMEEL 72 >gi|284922649|emb|CBG35737.1| electron transport protein [Escherichia coli 042] Length = 175 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CCQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|284006925|emb|CBA72195.1| hydrogenase-4 component A [Arsenophonus nasoniae] Length = 209 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C+ C +VCPV+ N + ++ C+ C +C CP I+ Sbjct: 57 QLCHQCEDAPCAQVCPVNAINRINNAIQLNESLCVSCKLCGLACPFGTIEF 107 >gi|260948246|ref|XP_002618420.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238848292|gb|EEQ37756.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 219 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 118 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 174 >gi|161870931|ref|YP_001600111.1| ferredoxin, 4Fe-4S type [Neisseria meningitidis 053442] gi|161596484|gb|ABX74144.1| ferredoxin, 4Fe-4S bacterial type [Neisseria meningitidis 053442] gi|308388341|gb|ADO30661.1| putative ferredoxin [Neisseria meningitidis alpha710] gi|325137182|gb|EGC59777.1| iron-sulfur cluster-binding protein [Neisseria meningitidis M0579] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDQEHPETH 69 >gi|67906754|gb|AAY82817.1| predicted iron-sulfur cluster-binding protein [uncultured bacterium MedeBAC46A06] Length = 672 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 17/38 (44%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C++VCP + + I P C CG C CP A Sbjct: 296 CLDVCPAGAISVAGDTVEIDPAICGGCGYCGAVCPSGA 333 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T+NC +C CV CP + + L D C+ CG+C CP I + L Sbjct: 527 TDNCTICL--SCVSACPAGALQDNPDAPQLLFREDACLQCGICMATCPEKVITLVPQFNL 584 Query: 64 ELWLKINSEY 73 +N+E Sbjct: 585 AD-SAMNAEL 593 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D C C C CP A++ + + L+ + Sbjct: 525 IDTDNCTICLSCVSACPAGALQDNPDAPQLLFRE 558 >gi|50083956|ref|YP_045466.1| NADH dehydrogenase subunit I [Acinetobacter sp. ADP1] gi|81393674|sp|Q6FE64|NUOI_ACIAD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|49529932|emb|CAG67644.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Acinetobacter sp. ADP1] Length = 180 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 116 MTPDFELGEYV 126 >gi|332159393|ref|YP_004424672.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Pyrococcus sp. NA2] gi|331034856|gb|AEC52668.1| indolepyruvate ferredoxin oxidoreductase alpha subunit [Pyrococcus sp. NA2] Length = 613 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 ++ + C CK + CP + + I C CG+C CP DAIK E Sbjct: 555 IIEDKCTGCKACILLSGCPALIYDPETRKVKIDELICTGCGICNQLCPFDAIKFKEE 611 >gi|330864198|emb|CBX74259.1| electron transport complex protein rnfB [Yersinia enterocolitica W22703] Length = 126 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + PD C C +C CP D I+ Sbjct: 29 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLPDLCTGCDLCVSPCPTDCIE 82 >gi|310826808|ref|YP_003959165.1| hydrogenase large subunit domain protein [Eubacterium limosum KIST612] gi|308738542|gb|ADO36202.1| hydrogenase large subunit domain protein [Eubacterium limosum KIST612] Length = 566 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG-LELW 66 +C C C+ CPV +N I D CI CG C CP +A ++ + W Sbjct: 10 SCRNC--YKCIRYCPVKAIKLMDNQAQIVEDLCIGCGNCFRICPQNAKYVASDVDSIRQW 67 Query: 67 LK 68 L+ Sbjct: 68 LE 69 >gi|284162671|ref|YP_003401294.1| Coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631] gi|284012668|gb|ADB58621.1| Coenzyme F420 hydrogenase [Archaeoglobus profundus DSM 5631] Length = 405 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Query: 1 MTY-VVTENCILCKHTDCVEVCPVDCF---YEGENFLAI-HPDECIDCGVCEPECPVDAI 55 M + V ++NC+ C CV+ CP + G I + + C CG C CP +A+ Sbjct: 1 MAHHVNSDNCVGC--RMCVDACPSGALSSKFNGSILTIILNSELCTGCGSCVDICPFNAL 58 Query: 56 KPDTEPGLELW-LKIN 70 + ++ + ++I+ Sbjct: 59 ELVPREEVKEFKIEID 74 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 31/92 (33%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN------FLAIH---PDE----------------- 39 +E C C CV++CP + + I P++ Sbjct: 40 SELCTGCG--SCVDICPFNALELVPREEVKEFKIEIDILRPEKIEKKKYYMIARKVVDVS 97 Query: 40 -CIDCGVCEPECPVDAIKP-DTEPGLELWLKI 69 C CG C CP + I D W+KI Sbjct: 98 YCTGCGAC-TVCPPNGIIWKDGVVDFPDWVKI 128 >gi|255528595|ref|ZP_05395364.1| nitroreductase [Clostridium carboxidivorans P7] gi|255507710|gb|EET84181.1| nitroreductase [Clostridium carboxidivorans P7] Length = 273 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 1 MTYVVTENCILCKHTDCVEVC-PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V TE C+ C CV+ C P D +N I+ C CG C CP AI D Sbjct: 1 MMKVDTEKCVGCGL--CVKDCFPKD-IEMVDNKAKINNVTCFKCGHCIAVCPKAAITTD- 56 Query: 60 EPGLELWLKINSEYATQWPN 79 E +E + N E + P+ Sbjct: 57 EYNMEDVKEYNKEDFSIQPD 76 >gi|254294094|ref|YP_003060117.1| NADH dehydrogenase subunit I [Hirschia baltica ATCC 49814] gi|254042625|gb|ACT59420.1| NADH-quinone oxidoreductase, chain I [Hirschia baltica ATCC 49814] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 18/84 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAEPRSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 118 Query: 56 -----KPDTEPGLELWLKINSEYA 74 + TE EL+ + + Sbjct: 119 EGPNFEFSTETREELFYDKDRLLS 142 >gi|229523193|ref|ZP_04412600.1| electron transport complex protein RnfB [Vibrio cholerae TM 11079-80] gi|229525629|ref|ZP_04415034.1| electron transport complex protein RnfB [Vibrio cholerae bv. albensis VL426] gi|229339210|gb|EEO04227.1| electron transport complex protein RnfB [Vibrio cholerae bv. albensis VL426] gi|229339556|gb|EEO04571.1| electron transport complex protein RnfB [Vibrio cholerae TM 11079-80] Length = 195 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD G + + +EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAPCPTDCIEMIPV 164 Query: 58 DTEPGLELWLKINS 71 T P W ++N+ Sbjct: 165 QTTPESWKW-QLNA 177 >gi|254520968|ref|ZP_05133023.1| ferredoxin [Stenotrophomonas sp. SKA14] gi|219718559|gb|EED37084.1| ferredoxin [Stenotrophomonas sp. SKA14] Length = 137 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 80 ALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|217076873|ref|YP_002334589.1| Fe-hydrogenase, subunit beta [Thermosipho africanus TCF52B] gi|217036726|gb|ACJ75248.1| Fe-hydrogenase, subunit beta [Thermosipho africanus TCF52B] Length = 624 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C + C CP E I ++C+ CG+C +C +AI+ Sbjct: 569 YVINPELCKSC--SLCARACPQGAISGERGKPYVIDQEKCVKCGICFEKCKFNAIE 622 Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP I+P+ C C +C CP AI + Sbjct: 558 CPSGT-CTALRKYVINPELCKSCSLCARACPQGAISGE 594 >gi|134096059|ref|YP_001101134.1| 4Fe-4S ferredoxin-type protein [Herminiimonas arsenicoxydans] gi|133739962|emb|CAL63013.1| Ferredoxin [Herminiimonas arsenicoxydans] Length = 87 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y G+ I P +C +C C+ CPV+ Sbjct: 1 MALLITDECINCDV--CEPECPNDAIYMGQEIYEIDPTKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 I------KPDTEPGLELWLKINSEY 73 I + E + ++ +E Sbjct: 59 IPFNPAWRESKEELQAKYERLQAEL 83 >gi|17944955|gb|AAL48541.1| RE02647p [Drosophila melanogaster] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPV AI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVGAI 172 Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPV EG NF Sbjct: 157 CIYCGF--CQEACPVGAIVEGPNF 178 >gi|49081734|gb|AAT50267.1| PA2644 [synthetic construct] Length = 183 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMGEF 127 >gi|78187077|ref|YP_375120.1| ferredoxin, 4Fe-4S [Chlorobium luteolum DSM 273] gi|78166979|gb|ABB24077.1| ferredoxin, 4Fe-4S [Chlorobium luteolum DSM 273] Length = 62 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +TE C C C CPV+ GE I C+DC C CPVD Sbjct: 1 MAHRITETCTYC--AACEPECPVNAISAGEEIYVIDEAACVDCIGYHDEAACVAVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|75676070|ref|YP_318491.1| NADH dehydrogenase subunit I [Nitrobacter winogradskyi Nb-255] gi|115502535|sp|Q3SRF2|NUOI_NITWN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|74420940|gb|ABA05139.1| NADH dehydrogenase subunit I [Nitrobacter winogradskyi Nb-255] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 41 PISPRFRGEHALRRYPNGEERCIACKLCEAVCPAQAITIEAGP 83 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGL--CQEACPVDAIVEGPNF 123 >gi|121997163|ref|YP_001001950.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Halorhodospira halophila SL1] gi|121588568|gb|ABM61148.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Halorhodospira halophila SL1] Length = 253 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C++ CV VCP Y+ E+ + + D CI C C CP E L Sbjct: 57 PCMQCENPTCVYVCPTRATYKTEDGVVLVDWDRCIGCKYCMIACPYGVRFYADEKPL 113 >gi|323508175|emb|CBQ68046.1| probable NADH-ubiquinone oxidoreductase 23 kDa subunit precursor [Sporisorium reilianum] Length = 265 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 164 ERCIACKL--CEAICPAQAITIESEPREDGARRTTRYDIDMTKCIYCGFCQEACPVDAI 220 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++EP + Sbjct: 164 ERCIACKLCEAICPAQAITIESEPRED 190 Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD E +N Sbjct: 205 CIYCGF--CQEACPVDAIVETQNTEY 228 >gi|302341854|ref|YP_003806383.1| hypothetical protein Deba_0414 [Desulfarculus baarsii DSM 2075] gi|301638467|gb|ADK83789.1| protein of unknown function DUF362 [Desulfarculus baarsii DSM 2075] Length = 376 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C +CP C + D CI C C CPV AI Sbjct: 316 CRACG--KCAAICPAGCLRLEGRRASFDHDRCIRCYCCHEVCPVGAI 360 >gi|259416891|ref|ZP_05740811.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] gi|259348330|gb|EEW60107.1| 4Fe-4S ferredoxin, iron-sulfur binding [Silicibacter sp. TrichCH4B] Length = 192 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 7/60 (11%) Query: 3 YV-VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP--VDAIKP 57 YV ++E C LC+H C+ CP D + GE + L I C CG+C CP V AI P Sbjct: 127 YVTISEGCTLCQH--CIWSCPSDAIHLGEQGDTLEIRDRHCTGCGLCASACPERVLAILP 184 >gi|256830862|ref|YP_003159590.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256580038|gb|ACU91174.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 369 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E+C C H CVEVC + + ++I D+C C C C ++ D + Sbjct: 193 EHCTGCGH--CVEVCSHGALTLDLNSKISIDRDKCAGCAACFLVCRSGGLEVDWRVDVNT 250 Query: 66 WLKINSEYAT 75 +L+ +EYA Sbjct: 251 FLERMAEYAA 260 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 12/26 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 IHP+ C CG C C A+ D Sbjct: 190 IHPEHCTGCGHCVEVCSHGALTLDLN 215 >gi|217966854|ref|YP_002352360.1| dihydroorotate dehydrogenase [Dictyoglomus turgidum DSM 6724] gi|217335953|gb|ACK41746.1| dihydroorotate dehydrogenase [Dictyoglomus turgidum DSM 6724] Length = 390 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ ++ C C C +VC D E + I D C CG+C CP AI Sbjct: 327 AYINSDLCTSCG--ICKKVCIYDAPIEKDGKYFIT-DLCDGCGLCVRLCPTKAI 377 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Query: 34 AIHPDECIDCGVCEPECPVDA-IKPD 58 I+ D C CG+C+ C DA I+ D Sbjct: 328 YINSDLCTSCGICKKVCIYDAPIEKD 353 >gi|168183630|ref|ZP_02618294.1| [Fe] hydrogenase [Clostridium botulinum Bf] gi|237797011|ref|YP_002864563.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] gi|182673207|gb|EDT85168.1| [Fe] hydrogenase [Clostridium botulinum Bf] gi|229262829|gb|ACQ53862.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657] Length = 449 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Query: 13 KHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 T C CP D + N I ++C DCG C CP +I Sbjct: 91 GKTFCQNSCPFDAILINKKTNSTYIDAEKCTDCGFCVEACPTGSI 135 >gi|170680331|ref|YP_001746462.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli SMS-3-5] gi|170518049|gb|ACB16227.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli SMS-3-5] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDRAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|194366700|ref|YP_002029310.1| ferredoxin [Stenotrophomonas maltophilia R551-3] gi|194349504|gb|ACF52627.1| electron transport complex, RnfABCDGE type, B subunit [Stenotrophomonas maltophilia R551-3] Length = 137 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 80 ALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|110641792|ref|YP_669522.1| putative ferredoxin-like protein YdhX [Escherichia coli 536] gi|110343384|gb|ABG69621.1| putative ferredoxin-like protein YdhX [Escherichia coli 536] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 137 >gi|41582337|gb|AAS07951.1| NADH-quinone oxidoreductase, chain I [uncultured marine bacterium 463] Length = 175 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQGVKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 >gi|83721382|ref|YP_441028.1| ferredoxin [Burkholderia thailandensis E264] gi|167579757|ref|ZP_02372631.1| ferredoxin [Burkholderia thailandensis TXDOH] gi|167617833|ref|ZP_02386464.1| ferredoxin [Burkholderia thailandensis Bt4] gi|257140319|ref|ZP_05588581.1| ferredoxin [Burkholderia thailandensis E264] gi|83655207|gb|ABC39270.1| ferredoxin [Burkholderia thailandensis E264] Length = 87 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPQD 62 >gi|34496404|ref|NP_900619.1| NADH dehydrogenase subunit I [Chromobacterium violaceum ATCC 12472] gi|81656630|sp|Q7NZH3|NUOI_CHRVO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|34102257|gb|AAQ58623.1| NADH-ubiquinone oxidoreductase, chain I [Chromobacterium violaceum ATCC 12472] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G + I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAMAISIESEQREDGTRRTSRYDIDLTKCIFCGFCEEACPVDAI 117 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 61 ERCIACKLCEAVCPAMAISIESEQRED 87 >gi|30249729|ref|NP_841799.1| NADH dehydrogenase subunit I [Nitrosomonas europaea ATCC 19718] gi|75540328|sp|Q82TV1|NUOI_NITEU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|30180766|emb|CAD85680.1| nuoI; NADH dehydrogenase I (chain I) oxidoreductase protein [Nitrosomonas europaea ATCC 19718] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAMAITIESEQRDDSTRRTTRYDIDMIKCIFCGFCEEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 61 ERCIACKLCEAVCPAMAITIESEQRDD 87 >gi|85076501|ref|XP_955936.1| NADH:ubiquinone oxidoreductase 21.3c kD subunit [Neurospora crassa OR74A] gi|3929361|sp|Q12644|NDUS8_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; Flags: Precursor gi|1246816|emb|CAA64794.1| ferredoxin-like iron-sulfur subunit of mitochondrial complex I [Neurospora crassa] gi|28916969|gb|EAA26700.1| NADH:ubiquinone oxidoreductase 21.3c kD subunit [Neurospora crassa OR74A] Length = 219 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 118 ERCIACKL--CEAVCPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 175 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 176 ESP----------NAEYATE 185 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 99 PISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERAD 144 >gi|301771866|ref|XP_002921339.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 1 [Ailuropoda melanoleuca] gi|301771868|ref|XP_002921340.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 2 [Ailuropoda melanoleuca] Length = 210 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAVCPAQAITIEAEPRAD 135 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|302803981|ref|XP_002983743.1| hypothetical protein SELMODRAFT_422906 [Selaginella moellendorffii] gi|302817680|ref|XP_002990515.1| hypothetical protein SELMODRAFT_428992 [Selaginella moellendorffii] gi|300141683|gb|EFJ08392.1| hypothetical protein SELMODRAFT_428992 [Selaginella moellendorffii] gi|300148580|gb|EFJ15239.1| hypothetical protein SELMODRAFT_422906 [Selaginella moellendorffii] Length = 215 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 114 ERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 170 Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 114 ERCIACKLCEAVCPAQAITIEAEERED 140 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 155 CIYCGF--CQEACPVDAIVEGPNF 176 >gi|285019250|ref|YP_003376961.1| ferredoxin protein [Xanthomonas albilineans GPE PC73] gi|283474468|emb|CBA16969.1| putative ferredoxin protein [Xanthomonas albilineans] Length = 136 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 V+ +CI C T C++ CPVD G + + C C +C P CPVD I Sbjct: 81 ALVIEADCIGC--TKCIQACPVDAIVGGAKHMHTVLAPLCTGCALCLPACPVDCI 133 >gi|240102127|ref|YP_002958435.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] gi|239909680|gb|ACS32571.1| 7Fe ferredoxin [Thermococcus gammatolerans EJ3] Length = 167 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVD 53 C C+ C++VCP ++ + I P++CI C +C CP Sbjct: 47 CRHCEKAPCMDVCPAGAIFKDYDGAVIIDPNKCIGCMMCLAVCPFG 92 >gi|238898693|ref|YP_002924374.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466452|gb|ACQ68226.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 180 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEKKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|167629826|ref|YP_001680325.1| proton-translocating NADH-ubiquinone oxidoreductase, chain f [Heliobacterium modesticaldum Ice1] gi|167592566|gb|ABZ84314.1| proton-translocating NADH-ubiquinone oxidoreductase, chain f [Heliobacterium modesticaldum Ice1] Length = 659 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +TY + + C C T C CPV C I CI CG C C A+ Sbjct: 602 LTYRIDADKCRGC--TLCARRCPVGCITGKPREAYAIDETRCIKCGACLECCKFGAV 656 >gi|297583518|ref|YP_003699298.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297141975|gb|ADH98732.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 276 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVD 53 C C+ C +VCP + + I ++C+ C C CP D Sbjct: 72 ACYHCEDAACEKVCPEGAISTTDMGNVVIDQEQCVGCSYCTQNCPFD 118 >gi|297619405|ref|YP_003707510.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297378382|gb|ADI36537.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 163 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 + CI C C+E CP +N ++I C+ CG C ECPV AI+ Sbjct: 96 SNACIGCG--KCLE-CPYGAVNNTDNIGISIDHQACVLCGDCIDECPVSAIRF 145 >gi|73982759|ref|XP_864136.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor (Complex I-23KD) (CI-23KD) (TYKY subunit) isoform 2 [Canis familiaris] Length = 206 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAVCPAQAITIEAEPRAD 135 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|226944925|ref|YP_002799998.1| NADH dehydrogenase subunit I [Azotobacter vinelandii DJ] gi|226719852|gb|ACO79023.1| NADH-quinone oxidoreductase, chain I [Azotobacter vinelandii DJ] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMSEY 127 >gi|327403952|ref|YP_004344790.1| NADH dehydrogenase subunit I [Fluviicola taffensis DSM 16823] gi|327319460|gb|AEA43952.1| NADH dehydrogenase subunit I [Fluviicola taffensis DSM 16823] Length = 179 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 19/67 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 ENC C C CP + GE L I+ CI CG+CE Sbjct: 72 ENCTACGL--CAVACPAEAITMTSEERKKGEEHLYREEKYATTYEINMLRCIFCGLCEEA 129 Query: 50 CPVDAIK 56 CP +AI Sbjct: 130 CPKEAIF 136 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + C CG+C CP +AI +E Sbjct: 72 ENCTACGLCAVACPAEAITMTSEE 95 >gi|257459788|ref|ZP_05624895.1| anaeroBic dimethyl sulfoxide reductase chain B [Campylobacter gracilis RM3268] gi|257442804|gb|EEV17940.1| anaeroBic dimethyl sulfoxide reductase chain B [Campylobacter gracilis RM3268] Length = 193 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C++C+ + CV+VCP ++ ++ + I C+ C C CP DA D Sbjct: 62 SCVMCEDSPCVDVCPTGASFKTKDGVTLIDERLCVSCKYCILACPYDARFVD 113 >gi|195953852|ref|YP_002122142.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195933464|gb|ACG58164.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 165 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 +Y + NC C CV CP + ++ L D CI C C CP AI + E Sbjct: 46 SYFMPMNCFHCDVAPCVYACPTSAMTKRDDGLVFVRDNLCIGCKACIIACPYGAISFNPE 105 Query: 61 PG 62 Sbjct: 106 TE 107 >gi|195328615|ref|XP_002031010.1| GM25751 [Drosophila sechellia] gi|194119953|gb|EDW41996.1| GM25751 [Drosophila sechellia] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|171464203|ref|YP_001798316.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193741|gb|ACB44702.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 88 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y G I P +C +C C CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNDAIYMGLEIYEIDPSKCTECVGHYDAPQCRQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I + E Sbjct: 59 ILFNPEHTETQ 69 >gi|167855542|ref|ZP_02478304.1| translation initiation factor IF-1 [Haemophilus parasuis 29755] gi|219871281|ref|YP_002475656.1| nitrate reductase [Haemophilus parasuis SH0165] gi|167853343|gb|EDS24595.1| translation initiation factor IF-1 [Haemophilus parasuis 29755] gi|219691485|gb|ACL32708.1| nitrate reductase [Haemophilus parasuis SH0165] Length = 225 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 ++C C + CV VCP + + ++PD C+ C C CP Sbjct: 95 QSCQHCSNAPCVSVCPTGASFIDKATGIVDVNPDLCVGCAYCIAVCPY 142 >gi|218782731|ref|YP_002434049.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764115|gb|ACL06581.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 340 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA-IKPDTEP 61 NC+ C CV+ C E + I PD C CG C CP +A I + P Sbjct: 282 NCLGCGV--CVDRCQFHAI-ELDEVAKIDPDSCFGCGNCVLTCPAEALILEEIRP 333 >gi|148244397|ref|YP_001219091.1| NADH dehydrogenase subunit I [Candidatus Vesicomyosocius okutanii HA] gi|156633542|sp|A5CXG5|NUOI_VESOH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|146326224|dbj|BAF61367.1| NADH dehydrogenase I chain I [Candidatus Vesicomyosocius okutanii HA] Length = 163 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGEN---FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP + +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPANAITIESKMRDDGTRRTTQYDIDLFKCIFCGFCEEACPVDAI 118 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP +AI +++ Sbjct: 62 ERCIACKLCEAVCPANAITIESK 84 >gi|158520765|ref|YP_001528635.1| proto-chlorophyllide reductase 57 kD subunit [Desulfococcus oleovorans Hxd3] gi|158509591|gb|ABW66558.1| Proto-chlorophyllide reductase 57 kD subunit [Desulfococcus oleovorans Hxd3] Length = 263 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 5/54 (9%) Query: 5 VTE-NCILCKHTDCVEVC--PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +T+ +C LC CV C P C E I P C+ CG C CP I Sbjct: 142 ITDADCTLCG--ACVAACRDPAVCLDEANTRPVIDPGLCLACGACAKACPTGTI 193 >gi|90413331|ref|ZP_01221325.1| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum 3TCK] gi|90325732|gb|EAS42195.1| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum 3TCK] Length = 230 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPV 52 +C C + CV VCP ++ + + + P +C+ CG C CP Sbjct: 98 SCQHCDNAPCVHVCPTGASFKDPDTGIVDVDPFKCVGCGYCLAACPY 144 >gi|59711541|ref|YP_204317.1| electron transport complex protein RnfB [Vibrio fischeri ES114] gi|197334877|ref|YP_002155697.1| electron transport complex protein RnfB [Vibrio fischeri MJ11] gi|75507049|sp|Q5E6B7|RNFB_VIBF1 RecName: Full=Electron transport complex protein rnfB gi|226735435|sp|B5FCN4|RNFB_VIBFM RecName: Full=Electron transport complex protein rnfB gi|59479642|gb|AAW85429.1| predicted iron-sulfur protein (Rnf/Rsx reducing system) [Vibrio fischeri ES114] gi|197316367|gb|ACH65814.1| electron transport complex protein RnfB [Vibrio fischeri MJ11] Length = 194 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIESECTGCDLCVAPCPTDCIE 160 >gi|332528400|ref|ZP_08404394.1| RnfABCDGE type electron transport complex subunit B [Hylemonella gracilis ATCC 19624] gi|332042163|gb|EGI78495.1| RnfABCDGE type electron transport complex subunit B [Hylemonella gracilis ATCC 19624] Length = 248 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 17/87 (19%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD-- 58 V+ E+ CI C T C++ CP D G + I C C +C P CPVD I + Sbjct: 83 VIDEDWCIGC--TLCLKACPTDAILGGNKHMHTVIDA-YCTGCELCIPVCPVDCIHMEPV 139 Query: 59 ---------TEPGLELWLKINSEYATQ 76 G W + A Q Sbjct: 140 VHDVGATGPVPTGWAAWTADQAATARQ 166 Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 25 CFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C EG + I D CI C +C CP DAI Sbjct: 73 CGSEGPMTVAVIDEDWCIGCTLCLKACPTDAI 104 >gi|328773488|gb|EGF83525.1| hypothetical protein BATDEDRAFT_15687 [Batrachochytrium dendrobatidis JAM81] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEPRED 148 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNFEY 186 >gi|303258379|ref|ZP_07344382.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] gi|302858825|gb|EFL81913.1| formate dehydrogenase, iron-sulfur subunit [Burkholderiales bacterium 1_1_47] Length = 321 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C+ + C E CP E + D C+ CG+C CP + Sbjct: 145 SDQCKHCRTSPCHEACPTGAIVRNEFGGVYYQTDICMGCGMCVAACPFGVPE 196 >gi|222033427|emb|CAP76168.1| Uncharacterized ferredoxin-like protein ydhX [Escherichia coli LF82] gi|307553692|gb|ADN46467.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli ABU 83972] Length = 222 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 137 >gi|255655815|ref|ZP_05401224.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-23m63] gi|296450946|ref|ZP_06892693.1| anaerobic sulfite reductase subunit C [Clostridium difficile NAP08] gi|296879088|ref|ZP_06903084.1| anaerobic sulfite reductase subunit C [Clostridium difficile NAP07] gi|296260164|gb|EFH07012.1| anaerobic sulfite reductase subunit C [Clostridium difficile NAP08] gi|296429961|gb|EFH15812.1| anaerobic sulfite reductase subunit C [Clostridium difficile NAP07] Length = 315 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 14/84 (16%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +E C+ CK VE CPV +N L I + C +CG C C D+I+ + E G + Sbjct: 169 SELCVGCKKCAVVEACPVKAAKLTDNGKLEIDSNLCNNCGKCIESCNFDSIE-EKESGYK 227 Query: 65 LWL------------KINSEYATQ 76 +++ +IN ++ + Sbjct: 228 VYIGGKWGKSVRPGTQINRLFSKE 251 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 10/57 (17%) Query: 18 VEVCPVDCFYEGENFLAI--------HPDECIDCGVC--EPECPVDAIKPDTEPGLE 64 V CP +C N L I + C+ C C CPV A K LE Sbjct: 142 VGGCPNNCIKPDLNDLGIVGQRVPDYDSELCVGCKKCAVVEACPVKAAKLTDNGKLE 198 >gi|157161136|ref|YP_001458454.1| iron-sulfur cluster-binding protein [Escherichia coli HS] gi|157066816|gb|ABV06071.1| iron-sulfur cluster-binding protein [Escherichia coli HS] Length = 239 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 107 QSCQHCEDAPCIDVCPTGASWHDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 166 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 167 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 202 >gi|150389448|ref|YP_001319497.1| indolepyruvate ferredoxin oxidoreductase [Alkaliphilus metalliredigens QYMF] gi|149949310|gb|ABR47838.1| Indolepyruvate ferredoxin oxidoreductase [Alkaliphilus metalliredigens QYMF] Length = 595 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENF----LAIHPDECIDCGVCEPECPVDAIK 56 YV CI C CV CP E +++ +I + C+ C +C CPV+AIK Sbjct: 534 YVDPSICIGC--RSCVNTNCPPIRMKEYKDYDKLKSSIDANMCVGCSICAQVCPVNAIK 590 >gi|257064390|ref|YP_003144062.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] gi|256792043|gb|ACV22713.1| 4Fe-4S protein [Slackia heliotrinireducens DSM 20476] Length = 450 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 16/83 (19%) Query: 3 YVVTE-----------NCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVC 46 YV++E C+ ++ + C VC + E + + PD+CI CG C Sbjct: 2 YVISEMNSPKLSVHANRCVFVRNRNADCLRCASVCTTGAISKSEAGVTVDPDKCIGCGTC 61 Query: 47 EPECPVDAIKPDTEPGLELWLKI 69 CP ++ ++ ++ Sbjct: 62 ATACPSCCLEAMNPSDETMFFQM 84 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 7/67 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDE-CIDCGVCEPECPVDAIKPDTE 60 T+ C C C CP + F H C+ C +CE CP AI Sbjct: 312 TDICRSC--RMCTVFCPTGAISRFDTKDDAFGVEHRSALCMQCRLCETICPEHAITVSDT 369 Query: 61 PGLELWL 67 L+ ++ Sbjct: 370 VSLDEFV 376 >gi|253564715|ref|ZP_04842171.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. 3_2_5] gi|251946180|gb|EES86557.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides sp. 3_2_5] Length = 387 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV 52 +C C T C C E+ FL I+ +CIDCG+C CPV Sbjct: 9 DCCGC--TACTSACNRGAIIMQEDEQGFLYPHINTTQCIDCGLCNKVCPV 56 >gi|240172913|ref|ZP_04751572.1| Fe-S-cluster-containing hydrogenase, HybA [Mycobacterium kansasii ATCC 12478] Length = 293 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 ++ C C H C++VCP + E + + D C CG C CP I Sbjct: 113 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQQDICNGCGYCVSGCPYGVI 163 >gi|218780381|ref|YP_002431699.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218761765|gb|ACL04231.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 587 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T +T++C C C++ C D EN A+ D C CG C CP+ A+ Sbjct: 510 LTMTITDDCNGCGV--CLDTCGFDAIKI-ENGKAVQTDACRGCGRCATYCPLGAVH 562 >gi|156937322|ref|YP_001435118.1| sulfide reductase, subunit B [Ignicoccus hospitalis KIN4/I] gi|156566306|gb|ABU81711.1| sulfide reductase, subunit B [Ignicoccus hospitalis KIN4/I] Length = 353 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C++ C VCPV + E + + + CI C C CP A Sbjct: 164 IPVACNQCEYPPCTMVCPVRATWQEADGIVVVDSYRCIGCRYCITACPYGA 214 >gi|134096493|ref|YP_001101568.1| putative Iron-sulfur cluster-binding protein (partial) [Herminiimonas arsenicoxydans] gi|133740396|emb|CAL63447.1| Putative iron-sulfur cluster ferredoxin [Herminiimonas arsenicoxydans] Length = 243 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y E + + + D+CI C C CP A + D Sbjct: 72 SCLHCEEPPCVPVCPTGASYKRESDGLVLVDYDKCIGCNYCAWACPYGARELDE 125 >gi|28870536|ref|NP_793155.1| NADH dehydrogenase I subunit I [Pseudomonas syringae pv. tomato str. DC3000] gi|213970028|ref|ZP_03398160.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato T1] gi|301381383|ref|ZP_07229801.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato Max13] gi|302062154|ref|ZP_07253695.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato K40] gi|302130464|ref|ZP_07256454.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. tomato NCPPB 1108] gi|81730550|sp|Q87ZQ2|NUOI_PSESM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|28853784|gb|AAO56850.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213925132|gb|EEB58695.1| NADH dehydrogenase I, I subunit [Pseudomonas syringae pv. tomato T1] gi|330875766|gb|EGH09915.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965585|gb|EGH65845.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017278|gb|EGH97334.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMADF 127 >gi|330810470|ref|YP_004354932.1| NADH-quinone oxidoreductase subunit I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|75527983|sp|Q8RQ74|NUOI_PSEFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|19483810|gb|AAL89571.1| NADH dehydrogenase I subunit I [Pseudomonas fluorescens] gi|327378578|gb|AEA69928.1| NADH-quinone oxidoreductase subunit I [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|294626911|ref|ZP_06705502.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665011|ref|ZP_06730320.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598771|gb|EFF42917.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605230|gb|EFF48572.1| ferredoxin II [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 142 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 84 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 137 >gi|213612664|ref|ZP_03370490.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 119 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 >gi|195570536|ref|XP_002103263.1| GD20325 [Drosophila simulans] gi|194199190|gb|EDX12766.1| GD20325 [Drosophila simulans] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|195395498|ref|XP_002056373.1| GJ10912 [Drosophila virilis] gi|194143082|gb|EDW59485.1| GJ10912 [Drosophila virilis] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|166712771|ref|ZP_02243978.1| ferredoxin [Xanthomonas oryzae pv. oryzicola BLS256] Length = 142 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 84 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIQ 137 >gi|153852617|ref|ZP_01994054.1| hypothetical protein DORLON_00027 [Dorea longicatena DSM 13814] gi|149754259|gb|EDM64190.1| hypothetical protein DORLON_00027 [Dorea longicatena DSM 13814] Length = 607 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V ++ CI CK C++ CP G + I C CG+C CPV AI Sbjct: 550 HVSSDKCIGCK--KCIKELGCPAIVLNNGN--VCIDSSMCTGCGLCSQVCPVTAI 600 >gi|153814130|ref|ZP_01966798.1| hypothetical protein RUMTOR_00339 [Ruminococcus torques ATCC 27756] gi|317499935|ref|ZP_07958171.1| NADH dehydrogenase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087842|ref|ZP_08336767.1| hypothetical protein HMPREF1025_00350 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848526|gb|EDK25444.1| hypothetical protein RUMTOR_00339 [Ruminococcus torques ATCC 27756] gi|316898652|gb|EFV20687.1| NADH dehydrogenase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409537|gb|EGG88978.1| hypothetical protein HMPREF1025_00350 [Lachnospiraceae bacterium 3_1_46FAA] Length = 639 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C T C CP D + I+P++C+ CG C +C AI + Sbjct: 589 DKCKGC--TLCARTCPADAIIGKVKEVHMINPEKCLKCGACMEKCRFGAIYKE 639 Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 13/24 (54%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I PD+C C +C CP DAI Sbjct: 583 QYKIDPDKCKGCTLCARTCPADAI 606 >gi|86748357|ref|YP_484853.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris HaA2] gi|86571385|gb|ABD05942.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris HaA2] Length = 607 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VVT C C C+ + CP D ++EG + + I P CI C +C C +D IK Sbjct: 544 VVTSQCTAC--QSCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIA 601 Query: 59 TEP 61 T P Sbjct: 602 TPP 604 >gi|86156757|ref|YP_463542.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773268|gb|ABC80105.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 640 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 21/73 (28%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECID----------CGVCE 47 +T C C C CPV+ GE N + D+C CG C Sbjct: 382 ITRMCANCD--RCARACPVNAVPMGEPTVENGVNMWQVDKDKCTRFRTGNLNGNMCGACL 439 Query: 48 PECPVDAIKPDTE 60 CP + KPDT Sbjct: 440 AVCPYN--KPDTP 450 >gi|15678427|ref|NP_275542.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2621461|gb|AAB84905.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 341 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 3 YVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 YV+ + CI CK C++ CPVD E + + + CI CG C +CPV Sbjct: 125 YVIDDYLCIRCK--KCMKACPVDAITEKDGRVEVDQGRCIACGECLEKCPV 173 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 18/72 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCE 47 +V CI C C EVCP D E I CI C C Sbjct: 82 IVRGACIRCGF--CAEVCPTDPKTIECGENHLIREEFTIVPSEKLYVIDDYLCIRCKKCM 139 Query: 48 PECPVDAIKPDT 59 CPVDAI Sbjct: 140 KACPVDAITEKD 151 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVD 53 E C+ C CV+ CP E+ + PD+C+ C C CP Sbjct: 263 EKCVQC--RLCVDECPSGAITYSEDEGIVRDPDKCLRCSTCYQTCPFG 308 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 13/58 (22%) Query: 7 ENCILCKHTDCVEVCP-----------VDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 E CI C C CP EG+ + I CI CG C CP D Sbjct: 45 EYCIGCG--ACTTACPAPGAIKLVRDTDTAEEEGQTYPVIVRGACIRCGFCAEVCPTD 100 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPG 62 P++C+ C +C ECP AI + G Sbjct: 262 PEKCVQCRLCVDECPSGAITYSEDEG 287 >gi|313148174|ref|ZP_07810367.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides fragilis 3_1_12] gi|313136941|gb|EFR54301.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides fragilis 3_1_12] Length = 387 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 10/56 (17%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV---DAI 55 +C C T C VC E+ FL I+ +CI+CG+C CPV DAI Sbjct: 9 DCCGC--TACASVCNKGAIIMQEDEQGFLYPHINTTQCINCGLCNKVCPVFRYDAI 62 >gi|302344645|ref|YP_003809174.1| nitroreductase [Desulfarculus baarsii DSM 2075] gi|301641258|gb|ADK86580.1| nitroreductase [Desulfarculus baarsii DSM 2075] Length = 304 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T + + CI C CV CP F + CI CG C CP A+ Sbjct: 7 TVIDAQKCIGCG--RCVVTCPAQAFTLAAGKSVVSGQRCILCGHCLAVCPTGAV 58 >gi|295106564|emb|CBL04107.1| Fe-S-cluster-containing hydrogenase components 2 [Gordonibacter pamelaeae 7-10-1-b] Length = 207 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 22/52 (42%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C+ VCP Y+ + L + C C VC CP A+ P Sbjct: 51 CHQCEGAPCLAVCPEGAIYQERDRLQVDEARCTGCLVCALACPFGAVYPSAP 102 >gi|257790238|ref|YP_003180844.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317489699|ref|ZP_07948203.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325830251|ref|ZP_08163708.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257474135|gb|ACV54455.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316911293|gb|EFV32898.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325487718|gb|EGC90156.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 210 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +C C++ +CV+VCP + + E+ + I ++CI C C CP + E Sbjct: 58 YFLPISCQHCENPECVKVCPTEASHVAEDGSIQIDKEKCIGCQFCVMACPYGVRYLNEEE 117 >gi|229816530|ref|ZP_04446829.1| hypothetical protein COLINT_03583 [Collinsella intestinalis DSM 13280] gi|229807865|gb|EEP43668.1| hypothetical protein COLINT_03583 [Collinsella intestinalis DSM 13280] Length = 84 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 1 MTYVV--TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M + + + CI C CV+ CP + D C+ CG C+ CP AI Sbjct: 24 MAHPIIDADECIACGV--CVDACPAGVLELNDVATVADEDSCVACGACQDACPAGAI 78 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 I DECI CGVC CP ++ + Sbjct: 29 IDADECIACGVCVDACPAGVLELND 53 >gi|295659241|ref|XP_002790179.1| NADH-quinone oxidoreductase subunit I 2 [Paracoccidioides brasiliensis Pb01] gi|30351132|gb|AAP23044.1| ferredoxin-like iron-sulfur protein [Paracoccidioides brasiliensis] gi|226281884|gb|EEH37450.1| NADH-quinone oxidoreductase subunit I 2 [Paracoccidioides brasiliensis Pb01] Length = 229 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 186 ESP----------NAEYATETREELLYNKEKLLANGDKWE 215 >gi|26990820|ref|NP_746245.1| NADH dehydrogenase subunit I [Pseudomonas putida KT2440] gi|148546977|ref|YP_001267079.1| NADH dehydrogenase subunit I [Pseudomonas putida F1] gi|167034694|ref|YP_001669925.1| NADH dehydrogenase subunit I [Pseudomonas putida GB-1] gi|170721050|ref|YP_001748738.1| NADH dehydrogenase subunit I [Pseudomonas putida W619] gi|81733276|sp|Q88FH0|NUOI_PSEPK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|24985827|gb|AAN69709.1|AE016607_3 NADH dehydrogenase I, I subunit [Pseudomonas putida KT2440] gi|148511035|gb|ABQ77895.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida F1] gi|166861182|gb|ABY99589.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida GB-1] gi|169759053|gb|ACA72369.1| NADH-quinone oxidoreductase, chain I [Pseudomonas putida W619] gi|313498024|gb|ADR59390.1| NuoI [Pseudomonas putida BIRD-1] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMAEF 127 >gi|15597840|ref|NP_251334.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PAO1] gi|107102164|ref|ZP_01366082.1| hypothetical protein PaerPA_01003214 [Pseudomonas aeruginosa PACS2] gi|116050631|ref|YP_790550.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa UCBPP-PA14] gi|152984090|ref|YP_001347926.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PA7] gi|218891195|ref|YP_002440061.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa LESB58] gi|254235626|ref|ZP_04928949.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa C3719] gi|254241074|ref|ZP_04934396.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 2192] gi|296388895|ref|ZP_06878370.1| NADH dehydrogenase subunit I [Pseudomonas aeruginosa PAb1] gi|313107683|ref|ZP_07793865.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 39016] gi|81783693|sp|Q9I0J4|NUOI_PSEAE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|122259754|sp|Q02ND6|NUOI_PSEAB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|166918795|sp|A6V4E1|NUOI_PSEA7 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737408|sp|B7VAQ8|NUOI_PSEA8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|9948713|gb|AAG06032.1|AE004693_3 NADH Dehydrogenase I chain I [Pseudomonas aeruginosa PAO1] gi|115585852|gb|ABJ11867.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa UCBPP-PA14] gi|126167557|gb|EAZ53068.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa C3719] gi|126194452|gb|EAZ58515.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 2192] gi|150959248|gb|ABR81273.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa PA7] gi|218771420|emb|CAW27187.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa LESB58] gi|310880367|gb|EFQ38961.1| NADH Dehydrogenase I chain I [Pseudomonas aeruginosa 39016] Length = 182 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E E+ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMGEF 127 >gi|323491428|ref|ZP_08096612.1| hypothetical protein VIBR0546_18742 [Vibrio brasiliensis LMG 20546] gi|323314297|gb|EGA67377.1| hypothetical protein VIBR0546_18742 [Vibrio brasiliensis LMG 20546] Length = 228 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y+ E I H ++C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIIDVHKEKCVGCGYCLAACPYQ 145 >gi|296132262|ref|YP_003639509.1| NADH dehydrogenase (quinone) [Thermincola sp. JR] gi|296030840|gb|ADG81608.1| NADH dehydrogenase (quinone) [Thermincola potens JR] Length = 619 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C C +VCPV E + I +CI CG C +C DAI Sbjct: 569 DKCKGCG--ACKKVCPVGAISGEKKEAHEIDAGKCIKCGSCIEKCKFDAI 616 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 I PD+C CG C+ CPV AI + + E Sbjct: 566 IDPDKCKGCGACKKVCPVGAISGEKKEAHE 595 >gi|291523914|emb|CBK89501.1| Uncharacterized conserved protein [Eubacterium rectale DSM 17629] gi|291528625|emb|CBK94211.1| Uncharacterized conserved protein [Eubacterium rectale M104/1] Length = 202 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y V ++CI CK C VCP C + I+ + C+ CG C CP I+ Sbjct: 148 YFVGKDCIGCKL--CYSVCPQKCIDISSVPVTINQNHCLHCGRCAEICPKQCIE 199 >gi|282162803|ref|YP_003355188.1| putative ferredoxin [Methanocella paludicola SANAE] gi|282155117|dbj|BAI60205.1| putative ferredoxin [Methanocella paludicola SANAE] Length = 129 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ENC+ C CV VCPV +E + + + C+ CG C CPV I+ Sbjct: 77 ENCVHCG--ACVAVCPVGAIAFEYDWRVRMDEKACVQCGNCVTACPVKVIR 125 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 + C+ CG C CPV AI + + Sbjct: 75 DEENCVHCGACVAVCPVGAIAFEYD 99 >gi|297587688|ref|ZP_06946332.1| Na(+)-translocating NADH-quinone reductase subunit A [Finegoldia magna ATCC 53516] gi|297574377|gb|EFH93097.1| Na(+)-translocating NADH-quinone reductase subunit A [Finegoldia magna ATCC 53516] Length = 442 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 21/66 (31%) Query: 7 ENCILCKHTDCVEVCPV------------DCFYEGENFLAIHPDECIDCGVCEPECP--- 51 E CI C CV+VCP+ + +EG + ++ +CI+CG C CP Sbjct: 366 EPCIKC--AKCVDVCPIGLLPLFLQLKSLNGDFEGAEKMHLN--DCIECGTCSYVCPSNR 421 Query: 52 --VDAI 55 V+AI Sbjct: 422 PLVEAI 427 >gi|209695338|ref|YP_002263267.1| electron transport complex protein RnfB [Aliivibrio salmonicida LFI1238] gi|226735410|sp|B6EGH6|RNFB_ALISL RecName: Full=Electron transport complex protein rnfB gi|208009290|emb|CAQ79556.1| electron transport complex protein RnfB [Aliivibrio salmonicida LFI1238] Length = 194 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD G L + EC C +C CP D I+ Sbjct: 107 AFIHEDMCIGC--TKCIQACPVDAIVGGTKALHTVIEAECTGCDLCVAPCPTDCIE 160 >gi|194901136|ref|XP_001980108.1| GG20344 [Drosophila erecta] gi|195501171|ref|XP_002097689.1| GE26357 [Drosophila yakuba] gi|190651811|gb|EDV49066.1| GG20344 [Drosophila erecta] gi|194183790|gb|EDW97401.1| GE26357 [Drosophila yakuba] Length = 217 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|167561482|ref|ZP_02354398.1| ferredoxin [Burkholderia oklahomensis EO147] gi|167568712|ref|ZP_02361586.1| ferredoxin [Burkholderia oklahomensis C6786] Length = 87 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPQD 62 >gi|170742519|ref|YP_001771174.1| NADH dehydrogenase subunit I [Methylobacterium sp. 4-46] gi|226737402|sp|B0ULL2|NUOI_METS4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|168196793|gb|ACA18740.1| NADH-quinone oxidoreductase, chain I [Methylobacterium sp. 4-46] Length = 162 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 60 ERCIACKLCEAVCPAQAITIEAGP 83 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|78355521|ref|YP_386970.1| electron transport protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217926|gb|ABB37275.1| electron transport protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 201 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 18/48 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C CP + L + C+ C C CP A++ Sbjct: 65 CRHCEDAPCAASCPAGAIRRKDGALVVEEARCVGCKTCMLACPFGAVE 112 >gi|11498862|ref|NP_070091.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649316|gb|AAB89980.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 369 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + CI C C+ CP+ N + ++C+ CGVC P CPV+AI+ Sbjct: 285 VDSSKCIACG--ICMLRCPMKAVKAKINREPANVEAEKCLGCGVCVPTCPVEAIELVERE 342 Query: 62 GLELW 66 L+ W Sbjct: 343 ELQEW 347 >gi|116750299|ref|YP_846986.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699363|gb|ABK18551.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 185 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C+ C + E + + I PD+CI+C C CP I+ + Sbjct: 43 CRHCDPAPCLLACLPGAIFRDEELDTVLIDPDKCINCASCAMACPFGVIRYHED 96 >gi|332662321|ref|YP_004445109.1| NAD(P)H-quinone oxidoreductase subunit I [Haliscomenobacter hydrossis DSM 1100] gi|332331135|gb|AEE48236.1| NAD(P)H-quinone oxidoreductase subunit I [Haliscomenobacter hydrossis DSM 1100] Length = 176 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 19/67 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA----------IHPDECIDCGVCEPE 49 ENC C C CP + +GE L I+ CI CG+CE Sbjct: 71 ENCTACGL--CAVACPAEAITIVAEERKKGEEHLYREEKYAAVYDINMLRCIFCGLCEEA 128 Query: 50 CPVDAIK 56 CP DAI Sbjct: 129 CPKDAIY 135 >gi|329962378|ref|ZP_08300382.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] gi|328530101|gb|EGF56986.1| 4Fe-4S binding domain protein [Bacteroides fluxus YIT 12057] Length = 277 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C C + CV+ CP +G+ I ++CI C C CP A DT Sbjct: 207 AELCTHCGY--CVKHCPAGAILKGDECNTI-AEKCIKCCACVKGCPQKARSYDTP 258 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 10/25 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 + C CG C CP AI E Sbjct: 206 DAELCTHCGYCVKHCPAGAILKGDE 230 >gi|323697845|ref|ZP_08109757.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323457777|gb|EGB13642.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 192 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 C CK+ CV+ C + + I PD+C G C CP I+ D Sbjct: 65 PCQHCKNPQCVKACKAGAITKDPQNGIVRIDPDKCTGSGACIEACPYHVIQFD 117 >gi|218702738|ref|YP_002410367.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI39] gi|218372724|emb|CAR20599.1| formate-dependent nitrite reductase, 4Fe4S subunit [Escherichia coli IAI39] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDRAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|194442517|ref|YP_002042914.1| oxidoreductase AegA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401180|gb|ACF61402.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 157 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|154420549|ref|XP_001583289.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121917530|gb|EAY22303.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 499 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 7/53 (13%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDAI 55 CI C CV++CP G + + C+ CG C CP AI Sbjct: 133 ACIDC--YKCVDICPTGALTHGNHLQTFGHFGLRDSGCVSCGACVDVCPTKAI 183 >gi|117621271|ref|YP_856980.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562678|gb|ABK39626.1| 4Fe-4S binding domain protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 230 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +C C + CV VCP + + + ++PD C+ C C CP Sbjct: 100 SCQHCDNAPCVHVCPTGASHIRKEDGIVDVNPDLCVGCMYCLAACPYQ 147 >gi|329118705|ref|ZP_08247406.1| ferredoxin [Neisseria bacilliformis ATCC BAA-1200] gi|327465208|gb|EGF11492.1| ferredoxin [Neisseria bacilliformis ATCC BAA-1200] Length = 83 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 ILIDEEHPETH 69 >gi|317476538|ref|ZP_07935785.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316907281|gb|EFV28988.1| 4Fe-4S binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 277 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V TE C C + C CP +G+ ++CI C C CP A DT Sbjct: 205 VDTELCSHCGY--CAVHCPASAIKKGDE-CYTDAEKCIRCCACVKGCPQKARTFDTP 258 >gi|300114344|ref|YP_003760919.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Nitrosococcus watsonii C-113] gi|299540281|gb|ADJ28598.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus watsonii C-113] Length = 84 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I P C +C C CPV+ Sbjct: 1 MALLITDECINCDV--CEPECPNGAISQGEEIYVIEPKLCTECVGHFETPQCVEVCPVEC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAISQGEE 29 >gi|299531510|ref|ZP_07044916.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni S44] gi|298720473|gb|EFI61424.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni S44] Length = 86 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y GE F I P +C +C C CPV Sbjct: 1 MALMITDECINCDV--CEPECPNDAIYMGEEFYEIDPHKCTECVGHFDEPQCVQICPVAC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I P +++ ++ +T K Sbjct: 59 I-----PVNPEYIESREVLFKKYELLTQAK 83 >gi|237795647|ref|YP_002863199.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum Ba4 str. 657] gi|229262837|gb|ACQ53870.1| CobQ/CobB/MinD/ParA family protein [Clostridium botulinum Ba4 str. 657] Length = 281 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C C +C D I P C CG C CP++AIK + E E + Sbjct: 65 DICIKCG--KCKSICKFDAI----ENFKIDPFLCEGCGTCTLICPLNAIKLEDEKNAETF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I D CI CG C+ C DAI+ Sbjct: 62 IDKDICIKCGKCKSICKFDAIE 83 >gi|237728156|ref|ZP_04558637.1| cytochrome c-type biogenesis protein [Citrobacter sp. 30_2] gi|226910167|gb|EEH96085.1| cytochrome c-type biogenesis protein [Citrobacter sp. 30_2] Length = 223 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP + + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASYRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|206577946|ref|YP_002236052.1| protein AegA [Klebsiella pneumoniae 342] gi|288933050|ref|YP_003437109.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] gi|290511844|ref|ZP_06551212.1| electron transporter HydN [Klebsiella sp. 1_1_55] gi|206567004|gb|ACI08780.1| protein AegA [Klebsiella pneumoniae 342] gi|288887779|gb|ADC56097.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Klebsiella variicola At-22] gi|289775634|gb|EFD83634.1| electron transporter HydN [Klebsiella sp. 1_1_55] Length = 161 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 16/49 (32%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + CI C C CP A Sbjct: 55 ATACRQCEDAPCASVCPQGAIQRDNDVWWVDQRRCIGCKSCMVACPYGA 103 >gi|116751281|ref|YP_847968.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700345|gb|ABK19533.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 358 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 12/72 (16%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI-----KPD-- 58 + C C C + C V+ + +F I D CI CG+C CP +AI +P+ Sbjct: 275 DKCSHCG--ICADERCQVEAIRDEGDFYRIVGDRCIGCGLCATTCPEEAIALMRRQPEEP 332 Query: 59 --TEPGLELWLK 68 T E W++ Sbjct: 333 GTTPETEEAWME 344 Score = 37.4 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Query: 34 AIHPDECIDCGVCEPE-CPVDAIKPD 58 I PD+C CG+C E C V+AI+ + Sbjct: 271 EIDPDKCSHCGICADERCQVEAIRDE 296 >gi|117925006|ref|YP_865623.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Magnetococcus sp. MC-1] gi|117608762|gb|ABK44217.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Magnetococcus sp. MC-1] Length = 243 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C++ CV+VCP + + ++ L + CI C C CP A Sbjct: 102 CNHCENPPCVDVCPTNASFIRKDGLVLVDKHRCIGCRYCMIACPYKARSLVYHENTTPKD 161 Query: 68 KINSE 72 ++N E Sbjct: 162 QLNRE 166 >gi|326791477|ref|YP_004309298.1| PAS/PAC sensor protein [Clostridium lentocellum DSM 5427] gi|326542241|gb|ADZ84100.1| putative PAS/PAC sensor protein [Clostridium lentocellum DSM 5427] Length = 569 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C CV CPV+ I + CI CG C CP +A Sbjct: 10 NCKNC--YACVRACPVNAIQVQAEQAKIVKERCIGCGKCLKVCPKNA 54 >gi|284009327|emb|CBA76492.1| NADH-quinone oxidoreductase chain I [Arsenophonus nasoniae] Length = 180 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVVCPVGCISLQKAEQPDGRWYPEFFQINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|220931029|ref|YP_002507937.1| NADH dehydrogenase I subunit F [Halothermothrix orenii H 168] gi|219992339|gb|ACL68942.1| NADH dehydrogenase I subunit F [Halothermothrix orenii H 168] Length = 624 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C + C CPVD + I D+CI CG C C +A++ Sbjct: 574 DLCKGC--SLCARKCPVDAISGKVKEPFVIDQDKCIKCGACYEACKFNAVE 622 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP E I+PD C C +C +CPVDAI Sbjct: 558 CPAG-VCEALKSYKINPDLCKGCSLCARKCPVDAI 591 >gi|153811524|ref|ZP_01964192.1| hypothetical protein RUMOBE_01916 [Ruminococcus obeum ATCC 29174] gi|149832265|gb|EDM87350.1| hypothetical protein RUMOBE_01916 [Ruminococcus obeum ATCC 29174] Length = 204 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + + CI CK C VCP C + I+ + C+ CG C CP I+ Sbjct: 148 YFIGKECIGCKL--CCSVCPQKCIDISSVPVTINQNHCLHCGRCAEICPKQCIE 199 >gi|53718157|ref|YP_107143.1| ferredoxin [Burkholderia pseudomallei K96243] gi|53724088|ref|YP_104608.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76809059|ref|YP_332163.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121599810|ref|YP_991443.1| ferredoxin [Burkholderia mallei SAVP1] gi|124384667|ref|YP_001027481.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126439656|ref|YP_001057618.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 668] gi|126450276|ref|YP_001082447.1| ferredoxin [Burkholderia mallei NCTC 10247] gi|126453640|ref|YP_001064864.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1106a] gi|134279445|ref|ZP_01766157.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 305] gi|167718011|ref|ZP_02401247.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei DM98] gi|167737028|ref|ZP_02409802.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 14] gi|167814137|ref|ZP_02445817.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 91] gi|167822662|ref|ZP_02454133.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 9] gi|167844233|ref|ZP_02469741.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei B7210] gi|167892743|ref|ZP_02480145.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 7894] gi|167901239|ref|ZP_02488444.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei NCTC 13177] gi|167909457|ref|ZP_02496548.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 112] gi|167917485|ref|ZP_02504576.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei BCC215] gi|217419688|ref|ZP_03451194.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 576] gi|226199554|ref|ZP_03795111.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei Pakistan 9] gi|238561330|ref|ZP_00442188.2| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|242316665|ref|ZP_04815681.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1106b] gi|254174705|ref|ZP_04881366.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|254181869|ref|ZP_04888466.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1655] gi|254187803|ref|ZP_04894315.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei Pasteur 52237] gi|254196729|ref|ZP_04903153.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei S13] gi|254201695|ref|ZP_04908059.1| ferredoxin [Burkholderia mallei FMH] gi|254207029|ref|ZP_04913380.1| ferredoxin [Burkholderia mallei JHU] gi|254260260|ref|ZP_04951314.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1710a] gi|254296079|ref|ZP_04963536.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 406e] gi|254357508|ref|ZP_04973782.1| ferredoxin [Burkholderia mallei 2002721280] gi|52208571|emb|CAH34507.1| ferredoxin [Burkholderia pseudomallei K96243] gi|52427511|gb|AAU48104.1| ferredoxin [Burkholderia mallei ATCC 23344] gi|76578512|gb|ABA47987.1| ferredoxin [Burkholderia pseudomallei 1710b] gi|121228620|gb|ABM51138.1| ferredoxin [Burkholderia mallei SAVP1] gi|124292687|gb|ABN01956.1| ferredoxin [Burkholderia mallei NCTC 10229] gi|126219149|gb|ABN82655.1| ferredoxin [Burkholderia pseudomallei 668] gi|126227282|gb|ABN90822.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1106a] gi|126243146|gb|ABO06239.1| ferredoxin [Burkholderia mallei NCTC 10247] gi|134248645|gb|EBA48727.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 305] gi|147747589|gb|EDK54665.1| ferredoxin [Burkholderia mallei FMH] gi|147752571|gb|EDK59637.1| ferredoxin [Burkholderia mallei JHU] gi|148026572|gb|EDK84657.1| ferredoxin [Burkholderia mallei 2002721280] gi|157805773|gb|EDO82943.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 406e] gi|157935483|gb|EDO91153.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei Pasteur 52237] gi|160695750|gb|EDP85720.1| ferredoxin [Burkholderia mallei ATCC 10399] gi|169653472|gb|EDS86165.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei S13] gi|184212407|gb|EDU09450.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1655] gi|217396992|gb|EEC37008.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 576] gi|225928435|gb|EEH24465.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei Pakistan 9] gi|238524794|gb|EEP88225.1| iron-sulfur cluster-binding protein [Burkholderia mallei GB8 horse 4] gi|242139904|gb|EES26306.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1106b] gi|254218949|gb|EET08333.1| ferredoxin, 4Fe-4S [Burkholderia pseudomallei 1710a] Length = 88 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P++C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPQD 62 >gi|325263205|ref|ZP_08129940.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium sp. D5] gi|324031598|gb|EGB92878.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Clostridium sp. D5] Length = 258 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 5/49 (10%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDA 54 E+C C CV VCP + E +CIDC C CP A Sbjct: 184 ESCTGCG--TCVSVCPTEAIDRENPRQT--DETKCIDCFACVKNCPAHA 228 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I + C CG C CP +AI + Sbjct: 181 IADESCTGCGTCVSVCPTEAIDRENP 206 >gi|302348178|ref|YP_003815816.1| NADH-quinone oxidoreductase subunit I [Acidilobus saccharovorans 345-15] gi|302328590|gb|ADL18785.1| NADH-quinone oxidoreductase subunit I [Acidilobus saccharovorans 345-15] Length = 196 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 22/103 (21%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--------------GENFLAIHPDECIDCGVCEPEC 50 + + CI C C +CP + + I+ + CI CG C C Sbjct: 62 IFDKCISC--ASCARICPARAMKMVTMEVKDKKLNRAMKKKYPVINYNRCIFCGYCVDVC 119 Query: 51 PVDAIKPDTEPG-----LELWLKINSEYATQWPNITTKKESLP 88 P +A+ ++ + +N E + P T KE +P Sbjct: 120 PTEALYHVPYHDLVYLNMQDMI-LNVEEFQKEPEFVTAKEGVP 161 >gi|288942375|ref|YP_003444615.1| RnfABCDGE type electron transport complex subunit B [Allochromatium vinosum DSM 180] gi|288897747|gb|ADC63583.1| electron transport complex, RnfABCDGE type, B subunit [Allochromatium vinosum DSM 180] Length = 178 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKP-DT 59 +V CI C T C + CP D N + + D CI C +C CP + I+ Sbjct: 103 AHVNEGLCIGC--TKCFKRCPTDAIMGANNMIHVVFADACIGCELCSEICPTEGIEMRPL 160 Query: 60 EPGLELWL 67 P L+ W Sbjct: 161 APTLQNWY 168 >gi|268678875|ref|YP_003303306.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268616906|gb|ACZ11271.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 83 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++TE CI C C + CP E + I PD C +C C CPV+ Sbjct: 1 MSLMITEECIACD--ACRDECPNGAIEESDPIYIIDPDVCTECVGHYDEPACISVCPVEC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDPD 64 >gi|218439089|ref|YP_002377418.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] gi|218171817|gb|ACK70550.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Cyanothece sp. PCC 7424] Length = 128 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 8/59 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVD 53 M+Y +T CI C C+ CP + + L I C DC C CP + Sbjct: 1 MSYTITHQCIGCD--RCLVQCPTGAIEKVNDVLVIDSTLCNDCLGYYGTAQCASICPTN 57 >gi|168465031|ref|ZP_02698923.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632373|gb|EDX50857.1| protein AegA [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 157 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|154149965|ref|YP_001403583.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998517|gb|ABS54940.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoregula boonei 6A8] Length = 118 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 E CI C C EVCP F EGE + +P C++CG C CPV AI Sbjct: 14 AEKCINC--RRCTEVCPHGVFAEGEKTAVLGNPRACMECGACAKNCPVQAI 62 >gi|153953474|ref|YP_001394239.1| hypothetical protein CKL_0840 [Clostridium kluyveri DSM 555] gi|219854096|ref|YP_002471218.1| hypothetical protein CKR_0753 [Clostridium kluyveri NBRC 12016] gi|146346355|gb|EDK32891.1| Hypothetical protein CKL_0840 [Clostridium kluyveri DSM 555] gi|219567820|dbj|BAH05804.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 178 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C CV VCPV E + + D+CI C C C V A+ Sbjct: 64 CRHCTEAFCVNVCPVKAIVENHGSIFVQEDKCIGCKNCMLVCAVGAV 110 >gi|119897052|ref|YP_932265.1| ferredoxin [Azoarcus sp. BH72] gi|119669465|emb|CAL93378.1| probable ferredoxin [Azoarcus sp. BH72] Length = 85 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 14/84 (16%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP +G+ I P++C +C C+ CPVD Sbjct: 1 MSLIITDECINCDV--CEPECPNGAISQGDEIYQIDPNKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPDTEPG------LELWLKINSE 72 I D + ++ +LK+++ Sbjct: 59 IPHDPDHQETKDQLMQKFLKLSAA 82 >gi|313906031|ref|ZP_07839384.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eubacterium cellulosolvens 6] gi|313469144|gb|EFR64493.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Eubacterium cellulosolvens 6] Length = 601 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 15/81 (18%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V + C+ CK C+++ CP +G I P++C+ CGVC+ C +DAI Sbjct: 526 HVEEDKCVGCK--SCMKIGCPSLSMKDG--KSVIDPNQCVGCGVCQQMCKLDAILDSD-- 579 Query: 62 GLELWLKINSEYATQWPNITT 82 N+ +A+ P I+ Sbjct: 580 --------NNPHASIRPGISR 592 >gi|312222247|emb|CBY02187.1| hypothetical protein [Leptosphaeria maculans] Length = 230 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E + I +CI CG+C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAQAITIEAEERMDGSRRTTRYDIDMTKCIYCGLCQESCPVDAI 185 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 PV + GE+ L +P + CI C +CE CP AI + E ++ Sbjct: 110 PVSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEERMD 155 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG N Sbjct: 170 CIYCGL--CQESCPVDAIVEGPNTEY 193 >gi|257469060|ref|ZP_05633154.1| dihydroorotate dehydrogenase family protein [Fusobacterium ulcerans ATCC 49185] gi|317063306|ref|ZP_07927791.1| dihydroorotate dehydrogenase [Fusobacterium ulcerans ATCC 49185] gi|313688982|gb|EFS25817.1| dihydroorotate dehydrogenase [Fusobacterium ulcerans ATCC 49185] Length = 365 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 VV+E+ CI C C VC E I+ D+C CGVC +CP A Sbjct: 311 VVSEDKCIGCG--ICKTVCGYKAIEIVEKKAVINKDKCFGCGVCVSKCPTKA 360 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + D+CI CG+C+ C AI+ Sbjct: 311 VVSEDKCIGCGICKTVCGYKAIE 333 >gi|206563028|ref|YP_002233791.1| putative dimethyl sulfoxide reductase subunit [Burkholderia cenocepacia J2315] gi|198039068|emb|CAR55031.1| putative dimethyl sulfoxide reductase subunit [Burkholderia cenocepacia J2315] Length = 247 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP F + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASFKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|157826248|ref|YP_001493968.1| NADH dehydrogenase subunit I [Rickettsia akari str. Hartford] gi|226737411|sp|A8GPY5|NUOI_RICAH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|157800206|gb|ABV75460.1| NADH dehydrogenase subunit I [Rickettsia akari str. Hartford] Length = 159 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|283046736|ref|NP_001164315.1| NADH:ubiquinone reductase 23kD subunit precursor [Tribolium castaneum] gi|270009224|gb|EFA05672.1| hypothetical protein TcasGA2_TC015022 [Tribolium castaneum] Length = 212 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEERAD 137 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|150015601|ref|YP_001307855.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] gi|149902066|gb|ABR32899.1| nitroreductase [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 V + CI C CV CP EN I +ECI CG C CP +AI Sbjct: 6 VNQDKCIKCGL--CVNECPERVLEPSENGPKEICGEECISCGHCVAICPREAI 56 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 N + ++ D+CI CG+C ECP ++P E Sbjct: 2 NLITVNQDKCIKCGLCVNECPERVLEPSENGPKE 35 >gi|320335010|ref|YP_004171721.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319756299|gb|ADV68056.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus maricopensis DSM 21211] Length = 326 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VV + CI C C VCP + GE L + C C C CP AI Sbjct: 248 VVDDTCIDC--PVCANVCPTNAITRDFQPTGEVTLTLDLAACTSCNACAQSCPPQAITLQ 305 Query: 59 TEPGLELWLK 68 E +E + + Sbjct: 306 PEWPIEAFGE 315 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C CP D + + I+ C CG+C CP A++ D Sbjct: 36 ACARACPHDAVILT-HTVEINEANCTGCGLCVQACPSGALEFDV 78 >gi|312143536|ref|YP_003994982.1| iron-sulfur protein [Halanaerobium sp. 'sapolanicus'] gi|311904187|gb|ADQ14628.1| putative iron-sulfur protein [Halanaerobium sp. 'sapolanicus'] Length = 420 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 C C C+ +CPV+ E E+ + + + C+ CGVC CP + IK Sbjct: 292 CSQC--QKCLSICPVNAISEIEDEEGKKIVVDKELCLGCGVCLRTCPENNIK 341 >gi|297527527|ref|YP_003669551.1| ABC transporter related protein [Staphylothermus hellenicus DSM 12710] gi|297256443|gb|ADI32652.1| ABC transporter related protein [Staphylothermus hellenicus DSM 12710] Length = 601 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Query: 17 CVEVCPVD------CFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ CPV+ + I+ D CI CG+C +CP +AI P Sbjct: 21 CIRFCPVNKTKHKKAIELSPDGKHAVIYEDICIGCGICVKKCPFNAISIVNLPDE 75 >gi|257437596|ref|ZP_05613351.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Faecalibacterium prausnitzii A2-165] gi|257199903|gb|EEU98187.1| putative 4Fe-4S ferredoxin, iron-sulfur binding protein [Faecalibacterium prausnitzii A2-165] Length = 251 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V NCI C C CPV +NF P +CI C C CPV A Sbjct: 175 TVNANCISCGL--CARECPVGAISY-DNFTVTDPSKCITCMRCVSRCPVHA 222 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/19 (63%), Positives = 13/19 (68%) Query: 40 CIDCGVCEPECPVDAIKPD 58 CI CG+C ECPV AI D Sbjct: 180 CISCGLCARECPVGAISYD 198 >gi|226499536|ref|NP_001148902.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Zea mays] gi|195623106|gb|ACG33383.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Zea mays] Length = 223 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|126465802|ref|YP_001040911.1| ATPase RIL [Staphylothermus marinus F1] gi|126014625|gb|ABN70003.1| ABC transporter related [Staphylothermus marinus F1] Length = 601 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Query: 17 CVEVCPVD------CFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ CPV+ + I+ D CI CG+C +CP +AI P Sbjct: 21 CIRFCPVNKTKRKKAIELSPDGKHAVIYEDICIGCGICVKKCPFNAISIVNLPDE 75 >gi|157821497|ref|NP_001099792.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Rattus norvegicus] gi|149061895|gb|EDM12318.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|149061896|gb|EDM12319.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|149061897|gb|EDM12320.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 (predicted), isoform CRA_a [Rattus norvegicus] gi|165971299|gb|AAI58792.1| Ndufs8 protein [Rattus norvegicus] Length = 212 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEPRAD 137 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|148259940|ref|YP_001234067.1| NADH dehydrogenase subunit I [Acidiphilium cryptum JF-5] gi|326403106|ref|YP_004283187.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] gi|146401621|gb|ABQ30148.1| NADH dehydrogenase subunit I [Acidiphilium cryptum JF-5] gi|325049967|dbj|BAJ80305.1| NADH-quinone oxidoreductase subunit I [Acidiphilium multivorum AIU301] Length = 163 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+CE CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIEAEPREDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 118 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 62 ERCIACKLCEAICPAQAITIEAEPRED 88 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGL--CEEACPVDAIVEGPNF 124 >gi|305666894|ref|YP_003863181.1| nrfC protein [Maribacter sp. HTCC2170] gi|88709119|gb|EAR01353.1| nrfC protein [Maribacter sp. HTCC2170] Length = 177 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA 54 +E C C++ CV CP +G L DECI CG C CP DA Sbjct: 54 SERCNHCENAPCVRCCPTGASHIVDGGIVLV-TADECIGCGACIESCPYDA 103 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 14/65 (21%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V + CI C C+E CP D Y+ + D+C C C CP Sbjct: 84 VTADECIGCG--ACIESCPYDARYQHPDGYV---DKCTFCHHRLEKGQLPACVEVCPTKC 138 Query: 55 IKPDT 59 + Sbjct: 139 MYFGD 143 >gi|328952548|ref|YP_004369882.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] gi|328452872|gb|AEB08701.1| Glutamate synthase (NADPH) [Desulfobacca acetoxidans DSM 11109] Length = 1503 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECP 51 E C++C C CP E+ I P EC CG C CP Sbjct: 1424 EKCVVC--MTCARTCPFGAPKVAEDGFIDIDPAECHGCGNCASACP 1467 >gi|310791703|gb|EFQ27230.1| NADH-quinone oxidoreductase [Glomerella graminicola M1.001] Length = 226 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 182 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 183 ESP----------NAEYATE 192 >gi|264676947|ref|YP_003276853.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni CNB-2] gi|262207459|gb|ACY31557.1| NADH-ubiquinone oxidoreductase chain 9 [Comamonas testosteroni CNB-2] Length = 86 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y GE F I P +C +C C CPV Sbjct: 1 MALMITDECINCDV--CEPECPNDAIYMGEEFYEIDPHKCTECVGHFDEPQCVQICPVAC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I P +++ ++ +T K Sbjct: 59 I-----PVNPEYIESREVLFKKYEQLTQAK 83 >gi|119872161|ref|YP_930168.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119673569|gb|ABL87825.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 96 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C C+ C +CP C+ + +++ + + C++CG C CP + I+ + Sbjct: 32 EQCRKCEKKPCTYMCPAKCYVQQGDYVVLSTEACVECGTCRVVCPYNNIEWNYP 85 >gi|94498903|ref|ZP_01305441.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Oceanobacter sp. RED65] gi|94428535|gb|EAT13507.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Oceanobacter sp. RED65] Length = 195 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 115 DECIGC--TKCIQACPVDAILGAAKQMHTVIEDECTGCDLCLDPCPVDCI 162 Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 111 VIREDECIGCTKCIQACPVDAI 132 >gi|15644905|ref|NP_207075.1| ferredoxin [Helicobacter pylori 26695] gi|188527083|ref|YP_001909770.1| ferredoxin [Helicobacter pylori Shi470] gi|208434223|ref|YP_002265889.1| ferrodoxin [Helicobacter pylori G27] gi|210134475|ref|YP_002300914.1| ferredoxin [Helicobacter pylori P12] gi|217031497|ref|ZP_03437002.1| hypothetical protein HPB128_21g55 [Helicobacter pylori B128] gi|217033432|ref|ZP_03438862.1| hypothetical protein HP9810_1g46 [Helicobacter pylori 98-10] gi|254778980|ref|YP_003057085.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori B38] gi|298736776|ref|YP_003729306.1| ferredoxin [Helicobacter pylori B8] gi|308182451|ref|YP_003926578.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori PeCan4] gi|2313367|gb|AAD07340.1| ferredoxin [Helicobacter pylori 26695] gi|188143323|gb|ACD47740.1| ferredoxin [Helicobacter pylori Shi470] gi|208432152|gb|ACI27023.1| ferrodoxin [Helicobacter pylori G27] gi|210132443|gb|ACJ07434.1| ferredoxin [Helicobacter pylori P12] gi|216944137|gb|EEC23565.1| hypothetical protein HP9810_1g46 [Helicobacter pylori 98-10] gi|216946697|gb|EEC25293.1| hypothetical protein HPB128_21g55 [Helicobacter pylori B128] gi|254000891|emb|CAX28827.1| Putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori B38] gi|261837723|gb|ACX97489.1| ferrodoxin [Helicobacter pylori 51] gi|297379499|gb|ADI34386.1| Ferredoxin [Helicobacter pylori v225d] gi|298355970|emb|CBI66842.1| ferredoxin [Helicobacter pylori B8] gi|308061630|gb|ADO03518.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori Cuz20] gi|308064636|gb|ADO06528.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori PeCan4] gi|315586271|gb|ADU40652.1| ferredoxin [Helicobacter pylori 35A] gi|317012119|gb|ADU82727.1| putative 4Fe-4S ferredoxin-type protein [Helicobacter pylori Lithuania75] gi|317179328|dbj|BAJ57116.1| ferredoxin [Helicobacter pylori F30] gi|332673118|gb|AEE69935.1| ferredoxin [Helicobacter pylori 83] Length = 84 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECPVD 53 M+ +V + CI C C E CP + EG+ I PD C +C C CPVD Sbjct: 1 MSLLVNDECIACD--ACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVD 58 Query: 54 AIKPD 58 AI PD Sbjct: 59 AILPD 63 Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI C C ECP +AI+ Sbjct: 7 DECIACDACREECPSEAIEEGDP 29 >gi|84516958|ref|ZP_01004315.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] gi|84509076|gb|EAQ05536.1| iron-sulfur cluster-binding protein [Loktanella vestfoldensis SKA53] Length = 253 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI C +C CP A + D + G Sbjct: 81 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNEADCIGCSLCAWACPYGARELDAKAG 137 >gi|269216297|ref|ZP_06160151.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] gi|269130556|gb|EEZ61634.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Slackia exigua ATCC 700122] Length = 205 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA-----IKPD 58 V C C++ C +VCP Y+ E I D+CI C C CP +A +PD Sbjct: 61 VPLACQHCENPACQKVCPTGATYKDEKGRVEIDYDKCIGCRFCMAACPYNARVFNWSEPD 120 Query: 59 TEPGLE 64 +P + Sbjct: 121 HDPDFQ 126 >gi|168206256|ref|ZP_02632261.1| nitroreductase family protein [Clostridium perfringens E str. JGS1987] gi|170662298|gb|EDT14981.1| nitroreductase family protein [Clostridium perfringens E str. JGS1987] Length = 272 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V T CI C T C++ C V + I + CI+CG C CP +A+ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMVDGKAHIKNESCIECGHCIAICPKEAVSDSD 57 >gi|119509218|ref|ZP_01628368.1| transcriptional regulator [Nodularia spumigena CCY9414] gi|119466060|gb|EAW46947.1| transcriptional regulator [Nodularia spumigena CCY9414] Length = 538 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 9/64 (14%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVD 53 M Y + NC+ C +C CP + I P+ C +C G C CP + Sbjct: 1 MPYTIPNNNCVGCD--NCRPQCPTGAIKIENDEYWIDPNLCNNCEGYYPEPQCVIVCPTN 58 Query: 54 AIKP 57 + P Sbjct: 59 SPIP 62 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 I + C+ C C P+CP AIK + + E W+ N Sbjct: 3 YTIPNNNCVGCDNCRPQCPTGAIKIEND---EYWIDPN 37 >gi|220929646|ref|YP_002506555.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium cellulolyticum H10] gi|219999974|gb|ACL76575.1| Respiratory-chain NADH dehydrogenase domain 51 kDa subunit [Clostridium cellulolyticum H10] Length = 597 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M Y V C C C + CP+ C GE I +C CGVC +CP AI Sbjct: 540 MKYTVDASKCKSCG--ICAKACPMGCIK-GEKKVPYVIDNSKCAKCGVCIEKCPFKAI 594 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 CP + + +C CG+C CP+ IK + + ++ NS+ A Sbjct: 531 CPAG-VCKSMMKYTVDASKCKSCGICAKACPMGCIKGEKKVP---YVIDNSKCAK 581 >gi|66773136|ref|NP_001019573.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8b [Danio rerio] gi|66267262|gb|AAH95111.1| Zgc:109991 [Danio rerio] Length = 210 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAVCPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNFEY 173 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 109 ERCIACKLCEAVCPAQAITIEAE 131 >gi|257076190|ref|ZP_05570551.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroplasma acidarmanus fer1] Length = 88 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V TE C +C C++VCP + E EN +++H + C++CG CP A++ Sbjct: 22 VNTEMCKICVDKPCIKVCPAGTYEEDKENGISVHYERCLECGAALYACPFGALQFKYPEK 81 Query: 63 LELWL 67 ++ Sbjct: 82 GVSYI 86 >gi|68171162|ref|ZP_00544570.1| NADH-quinone oxidoreductase, chain I [Ehrlichia chaffeensis str. Sapulpa] gi|88657739|ref|YP_507496.1| NADH dehydrogenase subunit I [Ehrlichia chaffeensis str. Arkansas] gi|115502529|sp|Q2GGD7|NUOI_EHRCR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|67999432|gb|EAM86073.1| NADH-quinone oxidoreductase, chain I [Ehrlichia chaffeensis str. Sapulpa] gi|88599196|gb|ABD44665.1| NADH dehydrogenase I, I subunit [Ehrlichia chaffeensis str. Arkansas] Length = 169 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 68 ERCIACKL--CEAICPAQAITIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 124 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 109 CIYCGF--CQEACPVDAIVEGPNFEY 132 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 68 ERCIACKLCEAICPAQAITIEAQERDD 94 >gi|319957641|ref|YP_004168904.1| 4fe-4S ferredoxin [Nitratifractor salsuginis DSM 16511] gi|319420045|gb|ADV47155.1| 4Fe-4S ferredoxin [Nitratifractor salsuginis DSM 16511] Length = 83 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C E CP + E + I PD C +C C CPVD Sbjct: 1 MALMITDECIACD--ACREECPSEAIEENDPIYIIDPDRCTECVGFFDEPQCIAVCPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|307133274|ref|YP_003885290.1| Electron transport protein hydN [Dickeya dadantii 3937] gi|306530803|gb|ADN00734.1| Electron transport protein hydN [Dickeya dadantii 3937] Length = 177 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C++ C VCP D + ++ + + CI C C CP AI T P + Sbjct: 57 CHQCENAPCASVCPHDALVQHQDSIQVISSRCIGCKSCVIACPFGAINVVTRPSDDE 113 >gi|300313426|ref|YP_003777518.1| [4Fe-4S]-type ferredoxin [Herbaspirillum seropedicae SmR1] gi|300076211|gb|ADJ65610.1| [4Fe-4S]-type ferredoxin protein [Herbaspirillum seropedicae SmR1] Length = 86 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + Y G I PD+C +C C+ CPV Sbjct: 1 MALMITDDCINCDV--CEPECPNEAIYMGPQIYEIDPDKCTECVGHFEEPQCQQVCPVAC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|167534830|ref|XP_001749090.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772514|gb|EDQ86165.1| predicted protein [Monosiga brevicollis MX1] Length = 204 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGE---------NFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 103 ERCIACKL--CEAVCPAQAITIETEPREDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 159 Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +TEP + Sbjct: 103 ERCIACKLCEAVCPAQAITIETEPRED 129 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 144 CIFCGF--CQEACPVDAIVEGPNFEY 167 >gi|161616737|ref|YP_001590702.1| hypothetical protein SPAB_04556 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366101|gb|ABX69869.1| hypothetical protein SPAB_04556 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 157 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|148642371|ref|YP_001272884.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] gi|148551388|gb|ABQ86516.1| polyferredoxin, iron-sulfur binding [Methanobrevibacter smithii ATCC 35061] Length = 347 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD 53 CI CK C++ CPV + E + + ++P +CI CG C CPV+ Sbjct: 132 CIRCK--KCMKQCPVGAIHVEDDGKVVVNPFKCISCGECLDVCPVN 175 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 18/69 (26%) Query: 8 NCILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCEPECP 51 CI C C EVCP + + I CI C C +CP Sbjct: 86 ACIRCGF--CAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFIIDDYLCIRCKKCMKQCP 143 Query: 52 VDAIKPDTE 60 V AI + + Sbjct: 144 VGAIHVEDD 152 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 13/61 (21%) Query: 4 VVTENCILCKHTDCVEVCP-----------VDCFYEGENFLAIHPDECIDCGVCEPECPV 52 V+ E CI C C+ CP D EG + I+ CI CG C CP Sbjct: 42 VIKEYCIGCG--ACISSCPSPNAIKLVRDEDDETKEGVTYPIINKSACIRCGFCAEVCPT 99 Query: 53 D 53 + Sbjct: 100 E 100 Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +E C C C+ CP E + + + ++C+ C +C CP IK Sbjct: 263 SETCKKC--QMCIPDCPTKAISFDEKNDTIVRNENKCLRCSICYQSCPFSTIKY 314 >gi|114706714|ref|ZP_01439614.1| putative ferredoxin [Fulvimarina pelagi HTCC2506] gi|114537662|gb|EAU40786.1| putative ferredoxin [Fulvimarina pelagi HTCC2506] Length = 679 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V C LC CV CPVD + L C+ CG+C CP +AI + Sbjct: 515 HVDKNACTLC--MACVSACPVDALRANPDKPQLRFVESACVQCGICSATCPENAITLEAR 572 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T C++VCP + + I C CG C CP A+ Sbjct: 281 RKTGCTKCIDVCPPGAITPAGDEVLIDTAICGGCGNCAAHCPTGAVSY 328 Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + + + C C C CPVDA++ + + +++ Sbjct: 514 IHVDKNACTLCMACVSACPVDALRANPDKPQLRFVE 549 >gi|110803341|ref|YP_698302.1| nitroreductase family protein [Clostridium perfringens SM101] gi|110683842|gb|ABG87212.1| nitroreductase family protein [Clostridium perfringens SM101] Length = 272 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V T CI C T C++ C V + I + CI+CG C CP +A+ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMVDGKAHIKNESCIECGHCIAICPKEAVSDSD 57 >gi|332159501|ref|YP_004424780.1| putative ATPase RIL [Pyrococcus sp. NA2] gi|331034964|gb|AEC52776.1| putative ATPase RIL [Pyrococcus sp. NA2] Length = 589 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 30/88 (34%), Gaps = 14/88 (15%) Query: 7 ENCI--LCKHTDCVEVCPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAIK- 56 + C C H C VCPV+ E N I C CG+C +CP AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENNKPIIQEASCTGCGICVHKCPFKAISI 68 Query: 57 ----PDTEPGLELWLKINSEYATQWPNI 80 E IN+ + P + Sbjct: 69 VNLPEQLEEDCVHRYGINAFVLYRLPVV 96 >gi|260598698|ref|YP_003211269.1| NADH dehydrogenase subunit I [Cronobacter turicensis z3032] gi|260217875|emb|CBA32420.1| NADH-quinone oxidoreductase subunit I [Cronobacter turicensis z3032] Length = 211 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 89 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 146 Query: 57 PDTEPGLELW 66 + L + Sbjct: 147 LTPDFELGEF 156 >gi|254481086|ref|ZP_05094332.1| NADH-quinone oxidoreductase, chain I subfamily, putative [marine gamma proteobacterium HTCC2148] gi|214038881|gb|EEB79542.1| NADH-quinone oxidoreductase, chain I subfamily, putative [marine gamma proteobacterium HTCC2148] Length = 175 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQGVKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 >gi|195108159|ref|XP_001998660.1| GI24093 [Drosophila mojavensis] gi|193915254|gb|EDW14121.1| GI24093 [Drosophila mojavensis] Length = 216 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 115 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 171 Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 115 ERCIACKLCEAICPAQAITIEAEERAD 141 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 156 CIYCGF--CQEACPVDAIVEGPNF 177 >gi|157374447|ref|YP_001473047.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316821|gb|ABV35919.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 211 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 Y + +C C CV+ CP ++ + + + D CI C C CP DA + D Sbjct: 63 AYYTSISCNHCSEPVCVKACPTGAMHKRSKDGLVHVSSDLCIGCSSCAKACPYDAPQLD 121 >gi|20094339|ref|NP_614186.1| ferredoxin [Methanopyrus kandleri AV19] gi|19887398|gb|AAM02116.1| Ferredoxin [Methanopyrus kandleri AV19] Length = 139 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C+ C T C VCP + + +ECI CG C CPV A++ ++ G Sbjct: 83 DRCLHC--TACHSVCPTGAIELKGVEVELDDEECIVCGSCTEICPVGALRIASKEGER 138 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 13/29 (44%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E E L D C+ C C CP AI+ Sbjct: 73 EIEKTLVRDEDRCLHCTACHSVCPTGAIE 101 >gi|190348547|gb|EDK41017.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 233 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 132 ERCIACKL--CEAICPAQAITIEAEERADGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 188 >gi|153872014|ref|ZP_02001030.1| Thiosulfate reductase subunit B [Beggiatoa sp. PS] gi|152071520|gb|EDN68970.1| Thiosulfate reductase subunit B [Beggiatoa sp. PS] Length = 247 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDA 54 C C C+E CP Y+ E+ + + D C C +C P CP DA Sbjct: 60 CQHCDDAPCIEACPSGAAYKREDGMVLQDDAICSGCELCVPACPYDA 106 >gi|158319262|ref|YP_001511769.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139461|gb|ABW17773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Alkaliphilus oremlandii OhILAs] Length = 363 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 5/58 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C CK CPV + + C CG+C CP AI + ++ Sbjct: 31 QRCTECKDA-----CPVGAICMDNKIAHVDEESCKGCGICRAICPSQAISLKKDDEIK 83 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V +NC C C CP + ++G ++ + C CG+CE CP A+ DT Sbjct: 254 VHDNCSSCGL--CQTTCPSKAWKVQKHKGHVTISHNARLCTSCGLCEDLCPQKALSKDT 310 >gi|91772370|ref|YP_565062.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanococcoides burtonii DSM 6242] gi|91711385|gb|ABE51312.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanococcoides burtonii DSM 6242] Length = 128 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA 54 E C+ C C+ VCPV F +++ L + D+CI CG C CP +A Sbjct: 77 EECVECG--ACISVCPVGVFSFADDWSLEVDTDKCIQCGTCLTMCPHNA 123 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 36 HPDECIDCGVCEPECPVD 53 +EC++CG C CPV Sbjct: 75 DEEECVECGACISVCPVG 92 >gi|323703766|ref|ZP_08115405.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531290|gb|EGB21190.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 368 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C C + CP GE+ I + C+ CG C CP AI+ + + ++ Sbjct: 193 EKCTGC--RKCHQWCPAGAISMGEDKKSFIAAELCMGCGECTVSCPFGAIEVNWKTEPDV 250 Query: 66 WLKINSEY 73 + +EY Sbjct: 251 IQEKIAEY 258 Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 19/72 (26%), Gaps = 4/72 (5%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMD 94 I ++C C C CP AI + ++ +E T Sbjct: 190 IDLEKCTGCRKCHQWCPAGAISMG--EDKKSFIA--AELCMGCGECTVSCPFGAIEVNWK 245 Query: 95 GVKQKYEKYFSP 106 ++ + Sbjct: 246 TEPDVIQEKIAE 257 >gi|317133836|ref|YP_004089747.1| putative PAS/PAC sensor protein [Ruminococcus albus 7] gi|315450298|gb|ADU23861.1| putative PAS/PAC sensor protein [Ruminococcus albus 7] Length = 558 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 NC C C+ CPV N I ECI CG C CP DA I ++E Sbjct: 11 NCKNC--YKCIRHCPVKSIRFSGNQAHIIEQECILCGQCVVVCPQDAKQIVDESE 63 >gi|303241136|ref|ZP_07327645.1| methyl-accepting chemotaxis sensory transducer [Acetivibrio cellulolyticus CD2] gi|302591396|gb|EFL61135.1| methyl-accepting chemotaxis sensory transducer [Acetivibrio cellulolyticus CD2] Length = 632 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Query: 7 ENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ C C+ VCPV+ +G+++ I +CI CG C C A + Sbjct: 11 EKCVGCN--KCIYVCPVEGANISYIKDGKSYTKIDESKCITCGSCINACDHQA--RSYQD 66 Query: 62 GLELWL 67 LE +L Sbjct: 67 DLESFL 72 >gi|301061446|ref|ZP_07202216.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] gi|300444485|gb|EFK08480.1| 4Fe-4S binding domain protein [delta proteobacterium NaphS2] Length = 912 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 25/82 (30%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEG---------------ENFLAIHPDECID-- 42 YV + CI C C E CP + + G AI P+ CI Sbjct: 9 YVDMDKCIACG--ACAEKCPKKVDNAYDAGLGKRKAIYVKYAQAVPLKYAIDPEYCIKLT 66 Query: 43 ---CGVCEPECPVDAIKPDTEP 61 CG CE CP DAI + + Sbjct: 67 KGKCGNCEKICPADAINYEDKE 88 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V C C T CV +CP E I C CG+C C A+ Sbjct: 844 VNPNKCSSC--TVCVSICPYSAPRMNEKTGKAEIESTLCKGCGLCVASCRSGALH 896 >gi|292492246|ref|YP_003527685.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] gi|291580841|gb|ADE15298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosococcus halophilus Nc4] Length = 84 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I P C +C C CPV+ Sbjct: 1 MALLITDECINCDV--CEPECPNGAISQGEEIYVIEPKLCTECVGHFETPQCVEVCPVEC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IIPD 62 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAISQGEE 29 >gi|190575367|ref|YP_001973212.1| ferredoxin [Stenotrophomonas maltophilia K279a] gi|190013289|emb|CAQ46923.1| putative ferredoxin [Stenotrophomonas maltophilia K279a] Length = 137 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 +V +CI C T C++ CPVD G ++ + D C C +C P CPVD I+ Sbjct: 80 ALIVEADCIGC--TKCIQACPVDAIVGGAKYMHTVIADLCTGCELCIPPCPVDCIE 133 >gi|153814772|ref|ZP_01967440.1| hypothetical protein RUMTOR_00987 [Ruminococcus torques ATCC 27756] gi|317501321|ref|ZP_07959524.1| hypothetical protein HMPREF1026_01467 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088354|ref|ZP_08337273.1| hypothetical protein HMPREF1025_00856 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847803|gb|EDK24721.1| hypothetical protein RUMTOR_00987 [Ruminococcus torques ATCC 27756] gi|316897285|gb|EFV19353.1| hypothetical protein HMPREF1026_01467 [Lachnospiraceae bacterium 8_1_57FAA] gi|330408598|gb|EGG88064.1| hypothetical protein HMPREF1025_00856 [Lachnospiraceae bacterium 3_1_46FAA] Length = 204 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + + CI CK C VCP C + I+ + C+ CG C CP I+ Sbjct: 148 YFIGKECIGCKL--CYSVCPQKCIDISSVPVTINQNHCLHCGRCAEICPKQCIE 199 >gi|118602283|ref|YP_903498.1| NADH dehydrogenase subunit I [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|156633539|sp|A1AVS0|NUOI_RUTMC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|118567222|gb|ABL02027.1| NADH dehydrogenase subunit I [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 163 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPD--ECIDCGVCEPECPVDAI 55 E CI CK C VCP + + D +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPANAITIESEMRDDGTRRTIVYDIDLFKCIFCGFCEEACPVDAI 118 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP +AI ++E Sbjct: 62 ERCIACKLCEAVCPANAITIESE 84 >gi|191170336|ref|ZP_03031889.1| 4Fe-4S binding domain protein [Escherichia coli F11] gi|300976975|ref|ZP_07173710.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|190909144|gb|EDV68730.1| 4Fe-4S binding domain protein [Escherichia coli F11] gi|300308445|gb|EFJ62965.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|324014246|gb|EGB83465.1| 4Fe-4S binding domain protein [Escherichia coli MS 60-1] Length = 157 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TYTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSCCIGCKSCMLACPFGAME 105 >gi|307354476|ref|YP_003895527.1| cobyrinic acid ac-diamide synthase [Methanoplanus petrolearius DSM 11571] gi|307157709|gb|ADN37089.1| Cobyrinic acid ac-diamide synthase [Methanoplanus petrolearius DSM 11571] Length = 289 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 TE C+ C C+E C E+ ++ P C CGVC+ CP AI E+ Sbjct: 66 TEKCVQCG--ACLENCRFGAVEIKEDQYSVRPLLCEGCGVCDYVCPSGAISMKKRLSGEI 123 Query: 66 W 66 + Sbjct: 124 F 124 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G + I ++C+ CG C C A++ Sbjct: 58 GLDISVIDTEKCVQCGACLENCRFGAVE 85 >gi|257792756|ref|YP_003183362.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476653|gb|ACV56973.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 219 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + C C++ +CV+VCP + + ++ I +CI C C CP Sbjct: 59 YFLPVQCQHCENPECVKVCPTEASHIRDDGTVQIDKSKCIGCQFCAMACPYG 110 >gi|157737741|ref|YP_001490425.1| 4Fe-4S ferredoxin, iron-sulfur binding [Arcobacter butzleri RM4018] gi|157699595|gb|ABV67755.1| 4Fe-4S ferredoxin, iron-sulfur binding [Arcobacter butzleri RM4018] Length = 557 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 9/73 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA----IKP 57 V NC LC CV C VD + E + L I+P C CG CE CP +A I Sbjct: 424 VNEANCTLCL--SCVGACNVDALFANEADFTLRINPSLCTACGYCEVSCP-EADCLTITK 480 Query: 58 DTEPGLELWLKIN 70 D W K N Sbjct: 481 DEIELQPSWFKEN 493 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 16 DCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 CVEVCP E L +C CG C CP ++ L+ +++ Y Sbjct: 218 SCVEVCPTMAITKDETTKSLVFSNVDCNSCGECVSICPSGSLDSAATSRDSLF-ELSQFY 276 Query: 74 ATQWP 78 T+ P Sbjct: 277 KTRHP 281 >gi|149196293|ref|ZP_01873348.1| molybdopterin oxidoreductase, iron sulfur subunit [Lentisphaera araneosa HTCC2155] gi|149140554|gb|EDM28952.1| molybdopterin oxidoreductase, iron sulfur subunit [Lentisphaera araneosa HTCC2155] Length = 459 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C C E CPV+ + + E + H D+CI C C +CP + + Sbjct: 112 VTSACHHCLEPACSEGCPVNAYDKDEVTGIVKHLDDQCIGCQYCILKCPYEVPQF 166 >gi|134094045|ref|YP_001099120.1| putative electron transport complex protein: ferredoxin subunit (RfnB) [Herminiimonas arsenicoxydans] gi|133737948|emb|CAL60993.1| Putative electron transport complex, ferredoxin subunit [Herminiimonas arsenicoxydans] Length = 239 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 8/78 (10%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI----KP 57 V+ E+ CI C T C++ CPVD + I D C C +C CPVD I Sbjct: 92 VIDESLCIGC--TLCIQACPVDAIVGAAKQMHTIVTDLCTGCDLCVAPCPVDCIAMVEYT 149 Query: 58 DTEPGLELWLKINSEYAT 75 + G + W + ++ A Sbjct: 150 PGKTGWDAWSQAEADAAR 167 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 15/34 (44%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 PV+ I CI C +C CPVDAI Sbjct: 80 PVNGVERPRPVAVIDESLCIGCTLCIQACPVDAI 113 >gi|187922588|ref|YP_001894230.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] gi|187713782|gb|ACD15006.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia phytofirmans PsJN] Length = 85 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNDAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEP 61 I D + Sbjct: 59 IPRDPDH 65 >gi|92115240|ref|YP_575168.1| NADH dehydrogenase subunit I [Chromohalobacter salexigens DSM 3043] gi|110287760|sp|Q1QST9|NUOI_CHRSD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91798330|gb|ABE60469.1| NADH dehydrogenase subunit I [Chromohalobacter salexigens DSM 3043] Length = 179 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVACISLQKGERDDGRWYPEFFRINFSRCIFCGLCEEACPTSAIQ 114 Query: 57 PDTEPGLELW 66 + + + Sbjct: 115 LTPDFEMSEY 124 >gi|150018923|ref|YP_001311177.1| NADH dehydrogenase (quinone) [Clostridium beijerinckii NCIMB 8052] gi|149905388|gb|ABR36221.1| NADH dehydrogenase (quinone) [Clostridium beijerinckii NCIMB 8052] Length = 626 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C + C + CPV+ E + I +CI CG C C AI+ Sbjct: 576 EKCRGC--SKCAKGCPVEAITGEIKKPYVIDKSKCIKCGNCIEGCVFKAIR 624 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I ++C C C CPV+AI + + Sbjct: 571 YEIDKEKCRGCSKCAKGCPVEAITGEIKKP 600 >gi|325294269|ref|YP_004280783.1| NIL domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064717|gb|ADY72724.1| NIL domain-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 138 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIK 56 E C+ C C+ CP + FY + + D+C+ CG C P CP+ I Sbjct: 85 EKCVHCG--ACIAPCPTNAFYLDQETFKVKFDKDKCVGCGHCIPACPLRIIY 134 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++C+ CG C CP +A D E Sbjct: 85 EKCVHCGACIAPCPTNAFYLDQE 107 >gi|188584958|ref|YP_001916503.1| protein of unknown function DUF362 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349645|gb|ACB83915.1| protein of unknown function DUF362 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 398 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 8/59 (13%) Query: 6 TENCILCKHTDCVEVCPVDCF-----YEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + +C C C + CPVD G+ L I PD CI+C C CP A+ + Sbjct: 323 SNSCAHCG--ICQKSCPVDAIKTQRSTNGDKNLYTITPDNCIECYCCHELCPEKAVNIE 379 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 15/22 (68%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I + C CG+C+ CPVDAIK Sbjct: 321 IDSNSCAHCGICQKSCPVDAIK 342 >gi|204926687|ref|ZP_03217889.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323352|gb|EDZ08547.1| dimethylsulfoxide reductase, chain B [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 208 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY + C C CV CP ++ + + + C+ C CE CP A + DT Sbjct: 59 TYYFSIACNHCDEPVCVSGCPTGAMHKRKEDGLVVVDDSVCVGCRYCEMRCPYGAPQFDT 118 Query: 60 EPG 62 + Sbjct: 119 QAN 121 >gi|152998654|ref|YP_001364335.1| formate dehydrogenase subunit beta [Shewanella baltica OS185] gi|217971318|ref|YP_002356069.1| formate dehydrogenase subunit beta [Shewanella baltica OS223] gi|151363272|gb|ABS06272.1| formate dehydrogenase, beta subunit [Shewanella baltica OS185] gi|217496453|gb|ACK44646.1| formate dehydrogenase, beta subunit [Shewanella baltica OS223] Length = 303 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C+ C + N + D+CI CG C CP D K D + Sbjct: 97 ACMHCADPACLTACSTSGAIIQHANGVVDFDSDKCIGCGYCASACPFDVPKIDPKDN 153 >gi|219666619|ref|YP_002457054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|219536879|gb|ACL18618.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 185 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIK 56 + ++ C C + +C+ VCP + + + + +H PD+C C C CP A + Sbjct: 55 FFLSTACNHCANPECLRVCPYGAYAKRRDGIVLHFPDKCGSCKSCVASCPFGAPQ 109 >gi|316973508|gb|EFV57088.1| NADH-quinone oxidoreductase subunit I [Trichinella spiralis] Length = 165 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG+C+ CPVDAIK Sbjct: 84 ERCIACKL--CEAICPAQAITIEAEERPDGSRRTTRYDIDMCKCIYCGLCQEACPVDAIK 141 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 84 ERCIACKLCEAICPAQAITIEAEE 107 >gi|317489038|ref|ZP_07947565.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831036|ref|ZP_08164360.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|316911905|gb|EFV33487.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486957|gb|EGC89403.1| putative thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 219 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + C C++ +CV+VCP + + ++ I +CI C C CP Sbjct: 59 YFLPVQCQHCENPECVKVCPTEASHIRDDGTVQIDKSKCIGCQFCAMACPYG 110 >gi|313648951|gb|EFS13388.1| uncharacterized ferredoxin-like protein ydhX [Shigella flexneri 2a str. 2457T] Length = 222 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPY 136 >gi|313672137|ref|YP_004050248.1| glutamate synthase (nadph) gltb3 subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312938893|gb|ADR18085.1| glutamate synthase (NADPH) GltB3 subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 776 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%) Query: 6 TENCILCKHTD----CVEVCPVDCF----YEGENFLAI-HPDECIDCGVCEPECP 51 T+ C+ C C+ CP +G F I +P++CI CG+C CP Sbjct: 706 TKRCLSCGFCRDCELCLNSCPEQAISRIQKDGGKFEYISNPNKCIGCGICAGICP 760 >gi|257062959|ref|YP_003142631.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256790612|gb|ACV21282.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 205 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ C+ CP + + E + I D+CI C +C CP +A Sbjct: 64 ACQHCENAACLRACPTGATYKDEEGRVEIDYDKCIGCRMCMAACPYNA 111 >gi|226288083|gb|EEH43596.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Paracoccidioides brasiliensis Pb18] Length = 229 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 186 ESP----------NAEYATETREELLYNKEKLLANGDKWE 215 >gi|197302545|ref|ZP_03167600.1| hypothetical protein RUMLAC_01273 [Ruminococcus lactaris ATCC 29176] gi|197298443|gb|EDY32988.1| hypothetical protein RUMLAC_01273 [Ruminococcus lactaris ATCC 29176] Length = 383 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAI---HPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C C+ +CP E E+ I P++CI+C C CP + +K EP Sbjct: 11 CTGCL--ACMNLCPCGAITCQEREDGNVIPQIDPEKCIECHRCVQGCPENHVKEKHEPRQ 68 >gi|153806624|ref|ZP_01959292.1| hypothetical protein BACCAC_00894 [Bacteroides caccae ATCC 43185] gi|149131301|gb|EDM22507.1| hypothetical protein BACCAC_00894 [Bacteroides caccae ATCC 43185] Length = 300 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T +CI C CV+ CP + N I PD+C C C CP + I Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPDKCKSCRKCVEVCPQNTI 265 Score = 40.1 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|145299279|ref|YP_001142120.1| formate-dependent nitrite reductase, 4Fe4S subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142852051|gb|ABO90372.1| formate-dependent nitrite reductase, 4Fe4S subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 226 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +C C + CV VCP + + + PD C+ C C CP Sbjct: 96 SCQHCDNAPCVHVCPTGASHIRAEDGIVDVDPDLCVGCMYCLAACPYQ 143 >gi|160895522|ref|YP_001561104.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Delftia acidovorans SPH-1] gi|160361106|gb|ABX32719.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Delftia acidovorans SPH-1] Length = 439 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV + + ++C C C CP AI Sbjct: 19 EICIRCN--TCEATCPVGAITHDDRNYVVLAEQCNGCMDCVSPCPTGAI 65 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 14/26 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI D Sbjct: 16 IDPEICIRCNTCEATCPVGAITHDDR 41 >gi|90407574|ref|ZP_01215755.1| electron transport protein [Psychromonas sp. CNPT3] gi|90311277|gb|EAS39381.1| electron transport protein [Psychromonas sp. CNPT3] Length = 176 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C C + CP + +N + + + CI C C CP A Sbjct: 57 CRQCDDAPCAKACPNNAIISEDNHIKVIQELCIGCKSCVVACPYGA 102 >gi|26250358|ref|NP_756398.1| putative pyruvate formate-lyase 3 activating enzyme [Escherichia coli CFT073] gi|26110788|gb|AAN82972.1|AE016769_87 Putative pyruvate formate-lyase 3 activating enzyme [Escherichia coli CFT073] Length = 305 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +CI C C++ CP N I+ D CI CG C CP A++ Sbjct: 60 DCIRCG--KCIDACPQQALS-TTNAWFINRDRCIQCGKCTEICPTRALE 105 >gi|315637523|ref|ZP_07892731.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] gi|315478182|gb|EFU68907.1| iron-sulfur cluster-binding domain protein [Arcobacter butzleri JV22] Length = 557 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 9/73 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA----IKP 57 V NC LC CV C VD + E + L I+P C CG CE CP +A I Sbjct: 424 VNEANCTLCL--SCVGACNVDALFANEADFTLRINPSLCTACGYCEVSCP-EADCLTITK 480 Query: 58 DTEPGLELWLKIN 70 D W K N Sbjct: 481 DEIELQPSWFKEN 493 Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%) Query: 16 DCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 C EVCP E L +C CG C CP ++ L+ +++ Y Sbjct: 218 ACAEVCPTMAITKDETTKSLVFSNVDCNSCGECVSICPSGSLDSAATSRDSLF-ELSQFY 276 Query: 74 ATQWP 78 + P Sbjct: 277 KNRHP 281 >gi|296161524|ref|ZP_06844329.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] gi|295888168|gb|EFG67981.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia sp. Ch1-1] Length = 85 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + G I P +C +C C CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNNAISMGPEIYVIDPKKCTECVGHFDEPQCIQVCPVEC 58 Query: 55 IKPDTEP 61 I D E Sbjct: 59 IPRDPEH 65 >gi|317052646|ref|YP_004113762.1| hypothetical protein Selin_2493 [Desulfurispirillum indicum S5] gi|316947730|gb|ADU67206.1| hypothetical protein Selin_2493 [Desulfurispirillum indicum S5] Length = 263 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVD 53 + C C CV VCP + E+ + + D+ C CG C CP D Sbjct: 105 QLCNHCAEPSCVRVCPTGATFSREDGVVMVDDKVCWGCGYCINACPYD 152 >gi|194437731|ref|ZP_03069826.1| pyruvate-formate lyase-activating enzyme [Escherichia coli 101-1] gi|194423227|gb|EDX39219.1| pyruvate-formate lyase-activating enzyme [Escherichia coli 101-1] Length = 305 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +CI C C++ CP N I+ D CI CG C CP A++ Sbjct: 60 DCIRCG--KCIDACPQQALS-TTNAWFINRDRCIQCGKCTEICPTRALE 105 >gi|209542887|ref|YP_002275116.1| NADH-quinone oxidoreductase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|209530564|gb|ACI50501.1| NADH-quinone oxidoreductase, chain I [Gluconacetobacter diazotrophicus PAl 5] Length = 170 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFY------EG---ENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C CPVDC +G ++ I+ CI CG CE CP AI+ Sbjct: 49 ERCVACGL--CAVACPVDCISLQKTEQDGRWYPDYFRINFSRCIFCGFCEEACPTYAIQL 106 Query: 58 DTEPGLELWL 67 + + ++ Sbjct: 107 TPDFEMSEYV 116 >gi|189485599|ref|YP_001956540.1| electron transfer flavoprotein alpha subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287558|dbj|BAG14079.1| electron transfer flavoprotein alpha subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 409 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 10/61 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA--------IHPDECIDCGVCEPECPVDAI 55 V T+ C+ CK C VCP + E I ++C CG C C +AI Sbjct: 7 VFTDKCVGCK--MCENVCPFNAISIVERLEYPKKFKLAVIDLNKCTYCGSCVQTCKFNAI 64 Query: 56 K 56 + Sbjct: 65 E 65 >gi|293609588|ref|ZP_06691890.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828040|gb|EFF86403.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 87 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 14/82 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITNDCINCD--MCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD------TEPGLELWLKIN 70 IKPD E LE + +N Sbjct: 59 IKPDPAHIENKEQLLEKFKDLN 80 >gi|168008160|ref|XP_001756775.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692013|gb|EDQ78372.1| predicted protein [Physcomitrella patens subsp. patens] Length = 161 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 116 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 60 ERCIACKLCEAVCPAQAITIEAEERED 86 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 101 CIYCGF--CQEACPVDAIVEGPNF 122 >gi|146342337|ref|YP_001207385.1| putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] gi|146195143|emb|CAL79168.1| Putative 4Fe-4S ferredoxin, fixG-like protein [Bradyrhizobium sp. ORS278] Length = 497 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 17/82 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +C+ C CV VCP+ +G NF CI+CG+C C K D GL + Sbjct: 292 DCVDCG--ACVAVCPIGIDIRQGPNF------ACINCGLCVDACDGVMAKLDRPRGLIDY 343 Query: 67 LKINSEYATQWPNITTKKESLP 88 W NI + P Sbjct: 344 --------ESWTNIERGRAGQP 357 >gi|160873232|ref|YP_001552548.1| formate dehydrogenase subunit beta [Shewanella baltica OS195] gi|160858754|gb|ABX47288.1| formate dehydrogenase, beta subunit [Shewanella baltica OS195] gi|315265457|gb|ADT92310.1| formate dehydrogenase, beta subunit [Shewanella baltica OS678] Length = 303 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C+ C + N + D+CI CG C CP D K D + Sbjct: 97 ACMHCADPACLTACSTSGAIIQHANGVVDFDSDKCIGCGYCASACPFDVPKIDPKDN 153 >gi|83590549|ref|YP_430558.1| sigma-54 dependent trancsriptional regulator [Moorella thermoacetica ATCC 39073] gi|83573463|gb|ABC20015.1| sigma54 specific transcriptional regulator, Fis family [Moorella thermoacetica ATCC 39073] Length = 748 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE-PG 62 +T C +C C+ CPV + + P+ CI CG C C A + E Sbjct: 7 TITGKCRMC--YACIRNCPVKAIKVVDGQARVVPELCIACGHCVQVCAQGAKLVEREIDK 64 Query: 63 LELWLKIN-----------SEYATQWP 78 +E +L +E+ WP Sbjct: 65 VEEFLAAGRVIACLAPSFVAEFHPAWP 91 >gi|262203451|ref|YP_003274659.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia bronchialis DSM 43247] gi|262086798|gb|ACY22766.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gordonia bronchialis DSM 43247] Length = 333 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + I D C CG C CP ++ Sbjct: 132 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVIQDDVCNGCGTCVAGCPFGVVE 183 >gi|237808741|ref|YP_002893181.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Tolumonas auensis DSM 9187] gi|237501002|gb|ACQ93595.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Tolumonas auensis DSM 9187] Length = 1196 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 38/109 (34%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----------------------EG-ENFLA---IHPDE 39 + CI C +C VCP G + L ++P++ Sbjct: 699 DLCIQCG--NCSFVCPHAAIRAKFYHKDLAENAPAGAKWAPISARGFPDTLYTLQVYPED 756 Query: 40 CIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLP 88 C CG+C CPV A IN A + P + +K +L Sbjct: 757 CTGCGLCVEACPVRA-------DDAQHRAIN--MADKLPILAREKRALG 796 >gi|222823215|ref|YP_002574788.1| ferredoxin [Campylobacter lari RM2100] gi|222538436|gb|ACM63537.1| ferredoxin [Campylobacter lari RM2100] Length = 81 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T CI C C E CP + Y+ + I PD C +C C CPVD Sbjct: 1 MSLLITRECISCD--ACREECPDEAIYDNDPIYVIDPDLCTECVNEFSEPACIVACPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IIPDPD 64 >gi|326519500|dbj|BAK00123.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 223 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|167856055|ref|ZP_02478798.1| electron transport complex protein RnfB [Haemophilus parasuis 29755] gi|167852804|gb|EDS24075.1| electron transport complex protein RnfB [Haemophilus parasuis 29755] Length = 199 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ E CI C T C+ CPVD + + D C C +C CP D I+ Sbjct: 108 AYIHEELCIGC--TKCIAACPVDAIVGTNKAMHTVIADFCTGCELCVAPCPTDCIE 161 >gi|126133937|ref|XP_001383493.1| mitochondrial complex I NUIM TYKY subunit (proton translocation) [Scheffersomyces stipitis CBS 6054] gi|126095642|gb|ABN65464.1| mitochondrial complex I NUIM TYKY subunit (proton translocation) [Scheffersomyces stipitis CBS 6054] Length = 226 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 125 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAI 181 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + E Sbjct: 106 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEE 148 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C + C E CPVD E N Sbjct: 166 CIYCGY--CQESCPVDAIVESPNVEY 189 >gi|119870982|ref|YP_940934.1| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. KMS] gi|161407219|ref|YP_642026.2| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. MCS] gi|119697071|gb|ABL94144.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. KMS] Length = 559 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC C C CP D EG + D C CG C +CPV AI+ E Sbjct: 504 NCFECDG--CYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPE 557 >gi|73670980|ref|YP_306995.1| hypothetical protein Mbar_A3546 [Methanosarcina barkeri str. Fusaro] gi|72398142|gb|AAZ72415.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 438 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C+ CK +E CP+ EN +P+ C +CG+C C +A Sbjct: 331 EKCLNCKDCLVIEACPMGAVSRRENGAVHNPEFCFNCGLCISRCRGEA 378 >gi|74149244|dbj|BAE22408.1| unnamed protein product [Mus musculus] Length = 212 Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEPRAD 137 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|327398596|ref|YP_004339465.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Hippea maritima DSM 10411] gi|327181225|gb|AEA33406.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Hippea maritima DSM 10411] Length = 202 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C++ C VCP Y ++ + I D C+ CG C CP DA + LE Sbjct: 64 CMHCENPPCHSVCPTGATYINKDGIVLIDYDLCLGCGYCIEACPYDARYEYEKEDLEK 121 >gi|326519326|dbj|BAJ96662.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 223 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|312622731|ref|YP_004024344.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Caldicellulosiruptor kronotskyensis 2002] gi|312203198|gb|ADQ46525.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 598 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 + + +NC+ CK V CP E EN + I C CG+C+ CP AI+ Sbjct: 540 FKINQNCLKCKVCLNVTGCP--AIDEDENGNIFIDSVLCKGCGLCKNFCPYYAIE 592 >gi|312880734|ref|ZP_07740534.1| electron transport complex, RnfABCDGE type, B subunit [Aminomonas paucivorans DSM 12260] gi|310784025|gb|EFQ24423.1| electron transport complex, RnfABCDGE type, B subunit [Aminomonas paucivorans DSM 12260] Length = 271 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C CV+ CP D + N I PD+C C +C +CP AI Sbjct: 218 CIGCGL--CVKACPNDAVHVENNLARIDPDKCTQCCLCVDKCPTKAI 262 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VCP D + + + +C+ CG C CP I+ Sbjct: 150 CVAVCPFDAIHIENSVARVDEAKCVGCGACVTLCPKGLIE 189 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 18/66 (27%) Query: 9 CILCKHTDCVEVCPVDCF----------------YEGENFLAIHPDECIDCGVCEPECPV 52 C+ C CV +CP + G + CI CG+C CP Sbjct: 173 CVGCG--ACVTLCPKGLIELVPLDQRVRVACHSTHRGPDVKKACQVGCIGCGLCVKACPN 230 Query: 53 DAIKPD 58 DA+ + Sbjct: 231 DAVHVE 236 >gi|303257784|ref|ZP_07343794.1| pyridine nucleotide-disulfide oxidoreductase family protein [Burkholderiales bacterium 1_1_47] gi|302859387|gb|EFL82468.1| pyridine nucleotide-disulfide oxidoreductase family protein [Burkholderiales bacterium 1_1_47] Length = 542 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFL-AI-HPDECIDCGVCEPECPVDAIKPDTE 60 NC+ C +C VCP + G++ + I + D C CGVC ECP AIK + E Sbjct: 487 NCLQCD--NCYGVCPDNAVIKTGDDNVPYIFNYDYCKGCGVCASECPCGAIKMEPE 540 >gi|300114447|ref|YP_003761022.1| electron transport complex RnfABCDGE type subunit B [Nitrosococcus watsonii C-113] gi|299540384|gb|ADJ28701.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus watsonii C-113] Length = 209 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DTE 60 V+ EN CI C T C++ CPVD L + EC C +C CPVD I+ Sbjct: 106 VIDENRCIGC--TLCIQACPVDAILGAPKQLHTVITAECTGCELCVAPCPVDCIEMVPVA 163 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAK 92 P W +WP T LP AA+ Sbjct: 164 PEPGTW---------KWPFPETTHPPLPIAAQ 186 >gi|298375410|ref|ZP_06985367.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19] gi|298267910|gb|EFI09566.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19] Length = 301 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP E + + C CG C CP A++ Sbjct: 52 CIGCG--ACVDVCPTGALTLTEAGIVTNRSLCRTCGRCAEVCPTLAME 97 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 9/16 (56%) Query: 39 ECIDCGVCEPECPVDA 54 +CI CG C CP A Sbjct: 51 KCIGCGACVDVCPTGA 66 >gi|295107545|emb|CBL05088.1| 4Fe-4S binding domain. [Gordonibacter pamelaeae 7-10-1-b] Length = 115 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 V + C C++ CV+VCP Y ++ I ++CI C C CP A Sbjct: 49 VPKQCNHCENPQCVKVCPTGASYVADDGTVQIDAEKCIGCKYCLAACPYQA 99 >gi|240102484|ref|YP_002958793.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] gi|239910038|gb|ACS32929.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Thermococcus gammatolerans EJ3] Length = 647 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 3 YVVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +V+ E C CK C+ CP + + I P C CG C CP DA +P E Sbjct: 588 HVIEEKCTGCK--ICINAYGCPAIYWDAEKKKARIDPTICWGCGGCAQVCPFDAFEPMKE 645 Query: 61 PG 62 Sbjct: 646 GE 647 >gi|239906941|ref|YP_002953682.1| nitroreductase family protein [Desulfovibrio magneticus RS-1] gi|239796807|dbj|BAH75796.1| nitroreductase family protein [Desulfovibrio magneticus RS-1] Length = 304 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPGLELW 66 C+ C +CV VCP G+ + + CI CG C CP A+ P +P + + Sbjct: 15 ACVGCG--ECVTVCPSGVLSLGDGLVVVAGAGCIGCGQCRAVCPQCALTIPGDDPWAQAY 72 >gi|303289747|ref|XP_003064161.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454477|gb|EEH51783.1| predicted protein [Micromonas pusilla CCMP1545] Length = 231 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 130 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 186 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 171 CIYCGF--CQEACPVDAIVEGPNFEY 194 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 130 ERCIACKLCEAICPAQAITIEAEERED 156 >gi|289207279|ref|YP_003459345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] gi|288942910|gb|ADC70609.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. K90mix] Length = 82 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP + Y G+ I P+ C +C C+ CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNEAIYPGDEIYEIDPERCTECVGHYDEPQCQDVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P E ++ ++Y Sbjct: 59 I-PLDPDRKETREQLQAKY 76 >gi|254509840|ref|ZP_05121907.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533551|gb|EEE36539.1| iron-sulfur cluster-binding protein [Rhodobacteraceae bacterium KLH11] Length = 238 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP + E+ + ++ +CI CG+C CP A + D G Sbjct: 70 SCLHCEDAPCVTVCPTGASYKRVEDGIVLVNESDCIGCGLCAWSCPYGARELDQAEG 126 >gi|144897604|emb|CAM74468.1| anaerobic dimethyl sulfoxide reductase chain B [Magnetospirillum gryphiswaldense MSR-1] Length = 244 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y E + + + D+CI C C CP A + D Sbjct: 75 SCLHCEDPPCVPVCPTGASYKRESDGIVLVDYDKCIGCKYCSWNCPYGAREFDE 128 >gi|124027372|ref|YP_001012692.1| putative ATPase RIL [Hyperthermus butylicus DSM 5456] gi|123978066|gb|ABM80347.1| RNase L inhibitor, ATPase [Hyperthermus butylicus DSM 5456] Length = 613 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 7 ENCILCK-HTDCVEVCPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C K H +C+ CPV+ F E I+ + C+ CG+C +CP AI Sbjct: 10 ELCKPSKCHRECIAFCPVNLTGGKAIEFDEARRKPVIYEETCVGCGICVKKCPFKAISIV 69 Query: 59 TEPGL 63 P Sbjct: 70 NLPDE 74 >gi|26991800|ref|NP_747225.1| ferredoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|148550200|ref|YP_001270302.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida F1] gi|24986912|gb|AAN70689.1|AE016712_7 ferredoxin, 4Fe-4S [Pseudomonas putida KT2440] gi|148514258|gb|ABQ81118.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas putida F1] gi|313501100|gb|ADR62466.1| Ferredoxin, 4Fe-4S [Pseudomonas putida BIRD-1] Length = 83 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IPLDEAHPE 67 >gi|330503264|ref|YP_004380133.1| NADH dehydrogenase subunit I [Pseudomonas mendocina NK-01] gi|328917550|gb|AEB58381.1| NADH dehydrogenase subunit I [Pseudomonas mendocina NK-01] Length = 182 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E ++ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMGEF 127 >gi|299068050|emb|CBJ39264.1| 4Fe-4S ferredoxin-type protein [Ralstonia solanacearum CMR15] Length = 82 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDAPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPHD 62 >gi|325679212|ref|ZP_08158803.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] gi|324109141|gb|EGC03366.1| 4Fe-4S binding domain protein [Ruminococcus albus 8] Length = 558 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 NC C C+ CPV N I ECI CG C CP DA I ++E Sbjct: 11 NCKNC--YKCIRYCPVKSIRFSGNQAHIIEQECILCGQCVVVCPQDAKQIVDESE 63 >gi|291280069|ref|YP_003496904.1| molybdopterin oxidoreductase 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] gi|290754771|dbj|BAI81148.1| molybdopterin oxidoreductase, 4Fe-4S ferredoxin [Deferribacter desulfuricans SSM1] Length = 184 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++T C VCP Y+ E + + D+CI C C CP DA Sbjct: 63 CQHCENTPCASVCPTHATYKTEEGVVLVDYDKCILCKACMTACPYDA 109 >gi|139437985|ref|ZP_01771538.1| Hypothetical protein COLAER_00525 [Collinsella aerofaciens ATCC 25986] gi|133776182|gb|EBA40002.1| Hypothetical protein COLAER_00525 [Collinsella aerofaciens ATCC 25986] Length = 401 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +E CI C CV C D E N A D CI CG C CPV+AI + + Sbjct: 8 SEACIGCG--RCVRACASDGIVVKGERPNRCARVTDGCILCGGCVDACPVNAISIERDEA 65 Query: 63 L 63 Sbjct: 66 A 66 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 11/24 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 L I + CI CG C C D I Sbjct: 3 GLIIDSEACIGCGRCVRACASDGI 26 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCF 26 VT+ CILC CV+ CPV+ Sbjct: 39 VTDGCILCGG--CVDACPVNAI 58 >gi|114320816|ref|YP_742499.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227210|gb|ABI57009.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 261 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 C C H CV+VCP + + + + CI C C CP A EP Sbjct: 124 CQHCAHPPCVQVCPTGASMQRADGIVQVDKHLCIGCRYCMMACPYKARSFVHEP 177 >gi|95930133|ref|ZP_01312872.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] gi|95133827|gb|EAT15487.1| 4Fe-4S ferredoxin, iron-sulfur binding [Desulfuromonas acetoxidans DSM 684] Length = 60 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKP 57 M+Y + E+C C +C VCPVDC +N I+ +ECIDCG C CPVD I Sbjct: 1 MSYRILEEDCTACG--ECEPVCPVDCISAKDNGKRLINEEECIDCGACADACPVDCIYQ 57 >gi|292492181|ref|YP_003527620.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] gi|291580776|gb|ADE15233.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus halophilus Nc4] Length = 180 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 12/74 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKAEDEQGRWYPEFFRINFSRCIFCGLCEEACPTYAIQ 115 Query: 57 PDTEPGLELWLKIN 70 + + + + N Sbjct: 116 LTPDFEMGEYERQN 129 >gi|283787055|ref|YP_003366920.1| cytochrome c-type biogenesis protein [Citrobacter rodentium ICC168] gi|282950509|emb|CBG90174.1| cytochrome c-type biogenesis protein [Citrobacter rodentium ICC168] Length = 223 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV+VCP + + N + ++PD C+ C C CP Sbjct: 91 SCQHCDRAPCVDVCPTGASYRDAANGIVDVNPDLCVGCQYCIAACPY 137 >gi|269468926|gb|EEZ80510.1| electron transport complex protein RnfB [uncultured SUP05 cluster bacterium] Length = 147 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK-PDTE 60 +V + CI C T C++ CPVD F + DEC C +C P CPVD I + + Sbjct: 74 FVDEQICIGC--TLCIQACPVDAFVGASKVMTTVIADECTGCDLCIPVCPVDCIHVLEVQ 131 Query: 61 PGLELWL 67 P L ++ Sbjct: 132 PTLNTYV 138 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY 27 MT V+ + C C C+ VCPVDC + Sbjct: 102 MTTVIADECTGCDL--CIPVCPVDCIH 126 >gi|257063524|ref|YP_003143196.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] gi|256791177|gb|ACV21847.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] Length = 447 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Query: 9 CILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C C+++CP + +GE P C++CGVC CP +AIK + ++ Sbjct: 318 CRACGV--CMQMCPTGSIHHTLGDGEFVYEFSPGTCVNCGVCVASCPKEAIKHRAQALMQ 375 Query: 65 LWL 67 + Sbjct: 376 PFY 378 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Query: 16 DCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 C++ CP ++ + I P C++CG C C +DA Sbjct: 31 SCIDTCPTGAIHKSDKRGMPEIDPTICVNCGQCLSACHLDA 71 >gi|218561250|ref|YP_002394163.1| pyruvate formate-lyase 3-activating enzyme [Escherichia coli S88] gi|218691120|ref|YP_002399332.1| putative pyruvate formate-lyase 3-activating enzyme [Escherichia coli ED1a] gi|237703757|ref|ZP_04534238.1| pyruvate-formate lyase-activating enzyme [Escherichia sp. 3_2_53FAA] gi|218368019|emb|CAR05821.1| putative pyruvate formate-lyase 3-activating enzyme [Escherichia coli S88] gi|218428684|emb|CAR09615.2| putative pyruvate formate-lyase 3-activating enzyme [Escherichia coli ED1a] gi|226901669|gb|EEH87928.1| pyruvate-formate lyase-activating enzyme [Escherichia sp. 3_2_53FAA] gi|323950274|gb|EGB46155.1| glycyl-radical enzyme activating protein family protein [Escherichia coli H252] gi|323955614|gb|EGB51374.1| glycyl-radical enzyme activating protein family protein [Escherichia coli H263] Length = 305 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +CI C C++ CP N I+ D CI CG C CP A++ Sbjct: 60 DCIRCG--KCIDACPQQALS-TTNAWFINRDRCIQCGKCTEICPTRALE 105 >gi|213416711|ref|ZP_03349855.1| hypothetical protein Salmonentericaenterica_01517 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPF 108 >gi|241662549|ref|YP_002980909.1| ferredoxin [Ralstonia pickettii 12D] gi|240864576|gb|ACS62237.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia pickettii 12D] Length = 276 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP----DTEP 61 E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 92 ERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCIDMIPVTGERT 149 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 150 GWDAWSQQRADVAR 163 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P + + I P+ CI C +C CPVDAI Sbjct: 76 PSNGIEQPRAIAVIDPERCIGCTLCIQACPVDAI 109 >gi|153005267|ref|YP_001379592.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028840|gb|ABS26608.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 307 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+ CP + E + + I D CI C C CP A Sbjct: 162 CQQCRNPPCVKACPTQATWKEPDGIVVIDYDWCIGCRCCMSACPYGA 208 >gi|254975433|ref|ZP_05271905.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-66c26] gi|255092820|ref|ZP_05322298.1| putative nitrite and sulfite reductase subunit [Clostridium difficile CIP 107932] gi|255517237|ref|ZP_05384913.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-97b34] gi|255650343|ref|ZP_05397245.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-37x79] gi|260683456|ref|YP_003214741.1| putative nitrite and sulfite reductase subunit [Clostridium difficile CD196] gi|260687052|ref|YP_003218185.1| putative nitrite and sulfite reductase subunit [Clostridium difficile R20291] gi|306520306|ref|ZP_07406653.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-32g58] gi|260209619|emb|CBA63285.1| putative nitrite and sulfite reductase subunit [Clostridium difficile CD196] gi|260213068|emb|CBE04440.1| putative nitrite and sulfite reductase subunit [Clostridium difficile R20291] Length = 315 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +E C+ CK VEVCPV + L I + C +CG C C D+I+ + E G + Sbjct: 169 SELCVGCKKCAVVEVCPVKAAKLTDKGKLEIDSNLCNNCGKCIESCNFDSIE-EKESGYK 227 Query: 65 LWL 67 +++ Sbjct: 228 VYI 230 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 10/57 (17%) Query: 18 VEVCPVDCFYEGENFLAI--------HPDECIDCGVC--EPECPVDAIKPDTEPGLE 64 V CP +C N L I + C+ C C CPV A K + LE Sbjct: 142 VGGCPNNCIKPDLNDLGIVGQRVPDYDSELCVGCKKCAVVEVCPVKAAKLTDKGKLE 198 >gi|159488755|ref|XP_001702368.1| NADH:ubiquinone oxidoreductase subunit 8 [Chlamydomonas reinhardtii] gi|34328786|gb|AAQ63697.1| NADH:ubiquinone oxidoreductase subunit 8 [Chlamydomonas reinhardtii] gi|158271162|gb|EDO96988.1| NADH:ubiquinone oxidoreductase subunit 8 [Chlamydomonas reinhardtii] Length = 231 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 130 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 186 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 130 ERCIACKLCEAICPAQAITIEAEERED 156 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 171 CIYCGF--CQEACPVDAIVEGPNF 192 >gi|327399174|ref|YP_004340043.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Hippea maritima DSM 10411] gi|327181803|gb|AEA33984.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Hippea maritima DSM 10411] Length = 590 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 4 VVTENCILCKHTDCVE-VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD-AI 55 VV + CI CK C+ CP +N I C C VC+ CPV+ AI Sbjct: 535 VVADKCIGCK--RCLRIACP--AIDFKDNKAVIDEVLCTGCEVCKNVCPVEGAI 584 >gi|255013975|ref|ZP_05286101.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 2_1_7] Length = 301 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP E + C CG C CP A++ Sbjct: 52 CIGCG--ACVDVCPTGALTLTEAGIVTDRSLCRTCGRCAEVCPTLAME 97 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C L +CI CG C CP A Sbjct: 26 CPLACVWCHNPEGISPRAEKLYTRK-KCIGCGACVDVCPTGA 66 >gi|291287559|ref|YP_003504375.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884719|gb|ADD68419.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 187 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T +C C+ CV CP + E+ + ++ CI CG C CP D + G Sbjct: 62 TLSCNHCEKPMCVASCPTKAMQKREDGIVFVNYSACIGCGTCSEVCPYSVPVMDEDLGQ 120 >gi|108803761|ref|YP_643698.1| 2-oxoacid:acceptor oxidoreductase subunit delta, pyruvate/2-ketoisovalerate [Rubrobacter xylanophilus DSM 9941] gi|108765004|gb|ABG03886.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Rubrobacter xylanophilus DSM 9941] Length = 403 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + CI C C CP +CF E L I+ + C CG+C CPV+ Sbjct: 291 DTCIKC--RQCWIDCPDECFEVTEEGLHPINYEYCTGCGICSQVCPVE 336 >gi|46202049|ref|ZP_00053861.2| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magnetotacticum MS-1] Length = 247 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C++ C EVCP F + + F+ + ++CI C C CP Sbjct: 52 PCMHCENPSCREVCPTGATFKDKDGFVLVDWEKCIGCKYCMVACPYG 98 >gi|330997523|ref|ZP_08321371.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] gi|329570468|gb|EGG52195.1| 4Fe-4S binding domain protein [Paraprevotella xylaniphila YIT 11841] Length = 387 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPVDAIKPDT 59 +T+ C CV++CP C + FL + CI CG+CE CP+ K Sbjct: 4 ITDKAKCCGCNACVQICPQKCIEMNPDSEGFLYPKTSKENCIQCGLCERVCPLGEPKSKR 63 Query: 60 EPGL 63 EP Sbjct: 64 EPKE 67 >gi|262276174|ref|ZP_06053983.1| iron-sulfur cluster-binding protein [Grimontia hollisae CIP 101886] gi|262219982|gb|EEY71298.1| iron-sulfur cluster-binding protein [Grimontia hollisae CIP 101886] Length = 570 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Query: 6 TENCIL-----CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--D 58 TE C T C++ CP + + I+P C G C CP +AI Sbjct: 198 TERCAHASRGLEGCTRCIDACPAEALSTINQTITINPYLCQGIGSCATVCPTEAISYALP 257 Query: 59 TEPGLELWL 67 + ++ Sbjct: 258 DPENTQHFV 266 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE-GEN-FLAIHPDECIDCGVCEPECPVDAIKPD 58 V T +C LC CV VCP G + +C+ CG+CE CP I + Sbjct: 433 VKTHDCTLCMG--CVAVCPTGALSSIGSRPGITFREQDCVQCGLCESSCPESVITLE 487 >gi|257065152|ref|YP_003144824.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Slackia heliotrinireducens DSM 20476] gi|256792805|gb|ACV23475.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Slackia heliotrinireducens DSM 20476] Length = 597 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C C C+ CP G+ I P CI CG C C DA+ + P Sbjct: 543 EACTGCG--MCMRACPAGAIS-GDRREPHVIDPHLCIACGSCREACHFDAVLTERRPA 597 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 1/45 (2%) Query: 19 EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CP AI P+ C CG+C CP AI D Sbjct: 525 KECPAG-VCAKLTQFAIEPEACTGCGMCMRACPAGAISGDRREPH 568 >gi|257064441|ref|YP_003144113.1| glycyl-radical enzyme activator family protein [Slackia heliotrinireducens DSM 20476] gi|256792094|gb|ACV22764.1| glycyl-radical enzyme activator family protein [Slackia heliotrinireducens DSM 20476] Length = 311 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 8 NCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 NCI C +CV VCPV + + + I C C C +C A++ +P Sbjct: 58 NCIGCG--ECVNVCPVGAIRMDSDEGVVIDRASCTLCLACADQCYAKALRAVAKP 110 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 19/33 (57%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E L P+ CI CG C CPV AI+ D++ G Sbjct: 49 EQQLIQSPNNCIGCGECVNVCPVGAIRMDSDEG 81 >gi|148285163|ref|YP_001249253.1| NADH dehydrogenase subunit I [Orientia tsutsugamushi str. Boryong] gi|189184497|ref|YP_001938282.1| NADH dehydrogenase subunit I [Orientia tsutsugamushi str. Ikeda] gi|156633535|sp|A5CFN6|NUOI_ORITB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737406|sp|B3CUK1|NUOI_ORITI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|146740602|emb|CAM81256.1| NADH dehydrogenase I chain I [Orientia tsutsugamushi str. Boryong] gi|189181268|dbj|BAG41048.1| NADH dehydrogenase I chain I [Orientia tsutsugamushi str. Ikeda] Length = 161 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E N I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAKEQPNGSRRTTKYDIDMTKCIYCGLCQEACPVDAI 116 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + + Sbjct: 60 ERCIACKLCEAICPAQAITIEAKE 83 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN 31 CI C C E CPVD EG N Sbjct: 101 CIYCGL--CQEACPVDAIVEGPN 121 >gi|304391410|ref|ZP_07373352.1| NADH-quinone oxidoreductase subunit i [Ahrensia sp. R2A130] gi|303295639|gb|EFL89997.1| NADH-quinone oxidoreductase subunit i [Ahrensia sp. R2A130] Length = 163 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 61 ERCIACKLCEAVCPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 11/40 (27%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF---------LAIHPDE 39 CI C C E CPVD EG NF L D+ Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNFEFSTETREELYYDKDK 140 >gi|289620443|emb|CBI53016.1| unnamed protein product [Sordaria macrospora] Length = 221 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 22/80 (27%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C VCP E E I +CI CG C+ CPVDAI Sbjct: 120 ERCIACKL--CEAVCPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 177 Query: 57 PDTEPGLELWLKINSEYATQ 76 N+EYAT+ Sbjct: 178 ESP----------NAEYATE 187 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 101 PISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERAD 146 >gi|284051681|ref|ZP_06381891.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Arthrospira platensis str. Paraca] gi|291570294|dbj|BAI92566.1| pyruvate flavodoxin oxidoreductase [Arthrospira platensis NIES-39] Length = 1193 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 37/113 (32%) Query: 6 TENCILCKHTDCVEVCPVDCF--------------------------YEGENFLA-IHPD 38 + C+ C C+ VCP +EG+ F + P+ Sbjct: 687 ADVCVQCG--KCIMVCPHAVIRGKAYDESALNGAPETFKTTAVRDKAFEGQKFTIQVSPE 744 Query: 39 ECIDCGVCEPECPV--------DAIKPDTEPGLELWLKINSEYATQWPNITTK 83 +C CG+C CP AI + +P + + N E+ PN + Sbjct: 745 DCTGCGICVDVCPAKNKSMPSKKAINMEYQPPIRATERDNWEFFLNLPNPDRR 797 >gi|315231247|ref|YP_004071683.1| Fe-hydrogenase subunit beta [Thermococcus barophilus MP] gi|315184275|gb|ADT84460.1| Fe-hydrogenase subunit beta [Thermococcus barophilus MP] Length = 190 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 ++ + C C T C CP + + I P++C+ CG+C C AI+ Sbjct: 135 IIPDKCKGC--TLCARNCPQNAITGAPGKVHKIDPNKCVGCGICASVCRFGAIEE 187 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + CI CK CV VCP + C+ C C CPV+A++ E Sbjct: 44 DKCIGCKL--CVTVCPAGVIEFVPEIKKVTFWLGRCVFCAQCVDVCPVNALEMSKE 97 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 12/26 (46%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKP 57 L D+CI C +C CP I+ Sbjct: 38 KLVYDVDKCIGCKLCVTVCPAGVIEF 63 >gi|170068344|ref|XP_001868829.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial [Culex quinquefasciatus] gi|167864397|gb|EDS27780.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial [Culex quinquefasciatus] Length = 213 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 112 ERCIACKL--CEAICPAQAITIEAEERTDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 168 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 112 ERCIACKLCEAICPAQAITIEAEE 135 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 153 CIYCGF--CQEACPVDAIVEGPNF 174 >gi|167625926|ref|YP_001676220.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355948|gb|ABZ78561.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 182 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 +C+ C + C+ VCP + ++ L + D+C CG+C CP DA+ Sbjct: 60 SCMHCGNPGCLMVCPSQAYSVRDDGLVVLDRDKCTGCGLCVNACPYDAV 108 >gi|121610913|ref|YP_998720.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121555553|gb|ABM59702.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 267 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C CV VCP Y+ + + + D+CI C C CP A + D + Sbjct: 107 SCLHCADPPCVPVCPTGASYKRQQDGIVLVDYDKCIGCKYCAWACPYGAREFDEQ 161 >gi|108772248|gb|ABG10970.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Mycobacterium sp. MCS] Length = 545 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC C C CP D EG + D C CG C +CPV AI+ E Sbjct: 490 NCFECDG--CYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPE 543 >gi|332800160|ref|YP_004461659.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Tepidanaerobacter sp. Re1] gi|332697895|gb|AEE92352.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Tepidanaerobacter sp. Re1] Length = 593 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V E C C C CP F I +CI C VC CPV+AI Sbjct: 538 VDEEICNGC--RACTRTGCPAINFSMNNKKSYIDQAQCIGCSVCAQVCPVNAIHE 590 >gi|301064321|ref|ZP_07204755.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] gi|300441600|gb|EFK05931.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] Length = 1395 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 7/77 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++V CI C C + CP G + P C CG C CP A Sbjct: 1320 SHVNEHYCIGCG--MCGDACPYGAIGLVDLETGGQVSRVQPALCKGCGACAVACPTGAAA 1377 Query: 57 PDTEPGLELWLKINSEY 73 E+ +++ Sbjct: 1378 VFHYDDQEVLTMVDAAL 1394 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 10/19 (52%) Query: 34 AIHPDECIDCGVCEPECPV 52 I PD C CG C CPV Sbjct: 18 FIDPDACTACGDCAEVCPV 36 >gi|295106684|emb|CBL04227.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 174 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 V+ +C+ C C +VCP GE+ + + ++CI C C CP + Sbjct: 55 FVSMSCMHCGEPACAKVCPAGAITKRGEDGIVVVDKEKCIGCHYCFFACPFGVPQY 110 >gi|289670256|ref|ZP_06491331.1| ferredoxin [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 139 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 81 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 134 >gi|256828656|ref|YP_003157384.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577832|gb|ACU88968.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 660 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 9/74 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL------AIHPDECIDCGVCEPECPVDAIKP 57 V C+ C C++ CP E ++ I C CG+C CP AI+ Sbjct: 579 VNPARCVGCG--KCIQTCPFGAIKEVQDRFGNPKAEVID-TVCQGCGICTVTCPQGAIQL 635 Query: 58 DTEPGLELWLKINS 71 + ++ ++N+ Sbjct: 636 EHFTDNQILAEVNA 649 Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 26/86 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECI- 41 TYV ++C C CVE CP D F E AI+ + C+ Sbjct: 235 TYVNWKDCTGCGL--CVEKCPSRKFPDKFNENLCNAPSINIPFPQAIPKKAAINAESCLM 292 Query: 42 ----DCGVCEPECPVDAIKPDTEPGL 63 CG+C CPV I + + L Sbjct: 293 LTKGKCGLCAKVCPVKCIDFEQQDEL 318 >gi|198433064|ref|XP_002131912.1| PREDICTED: similar to NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (TYKY subunit) [Ciona intestinalis] Length = 208 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 107 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 163 Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 148 CIYCGF--CQEACPVDAIVEGPNFEY 171 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 107 ERCIACKLCEAICPAQAITIEAEERAD 133 >gi|195037807|ref|XP_001990352.1| GH18285 [Drosophila grimshawi] gi|193894548|gb|EDV93414.1| GH18285 [Drosophila grimshawi] Length = 217 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|163732050|ref|ZP_02139496.1| NADH dehydrogenase subunit I [Roseobacter litoralis Och 149] gi|161394348|gb|EDQ18671.1| NADH dehydrogenase subunit I [Roseobacter litoralis Och 149] Length = 164 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP I +CI CG CE CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCEEACPVDAIV 120 Query: 56 -----KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 121 EGPNFEFSTETREELYYDKDRLLA 144 >gi|146307442|ref|YP_001187907.1| NADH dehydrogenase subunit I [Pseudomonas mendocina ymp] gi|145575643|gb|ABP85175.1| NADH dehydrogenase subunit I [Pseudomonas mendocina ymp] Length = 182 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C E ++ F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMGEY 127 >gi|71906801|ref|YP_284388.1| electron transport complex protein RnfB [Dechloromonas aromatica RCB] gi|71846422|gb|AAZ45918.1| Electron transport complex, RnfABCDGE type, B subunit [Dechloromonas aromatica RCB] Length = 180 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEP 61 V+ EN CI C T C++ CPVD L I +C C +C P CPV+ I T P Sbjct: 104 VIDENTCIGC--TLCIQACPVDAIVGAAKQLHIIIAQQCTGCELCLPPCPVECIAMATIP 161 Query: 62 G 62 Sbjct: 162 E 162 >gi|310779014|ref|YP_003967347.1| putative PAS/PAC sensor protein [Ilyobacter polytropus DSM 2926] gi|309748337|gb|ADO82999.1| putative PAS/PAC sensor protein [Ilyobacter polytropus DSM 2926] Length = 570 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTE 60 NC C CV C V + I D+CI CG C CP +A I D + Sbjct: 10 NCKHC--YKCVRKCEVKAIKIENDQAHIMEDKCIACGQCFAICPQNARNIMSDLD 62 >gi|293401784|ref|ZP_06645925.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304736|gb|EFE45984.1| putative 4Fe-4S binding domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 208 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y + NCI C C+ CP C +G+ I C+ CG+C CPV AI+ Sbjct: 152 YQIQTNCIGCN--KCLSSCPQQCIKQGKP-YHIVQSHCLHCGLCYELCPVHAIR 202 >gi|291280064|ref|YP_003496899.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] gi|290754766|dbj|BAI81143.1| iron-sulfur cluster-binding protein [Deferribacter desulfuricans SSM1] Length = 288 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C EVC D + I C CG C EC +AI + E + Sbjct: 67 ERCVKCN--RCYEVCEFDAVNFDGDTYLIDKLSCEGCGFCSYECKAEAINSYEKLTGEKY 124 Query: 67 LKI 69 + I Sbjct: 125 ISI 127 >gi|255008332|ref|ZP_05280458.1| putative dehydrogenase [Bacteroides fragilis 3_1_12] gi|313146055|ref|ZP_07808248.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides fragilis 3_1_12] gi|313134822|gb|EFR52182.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides fragilis 3_1_12] Length = 607 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +T+ C C +VC + EG + I D+C DCG+CE CP+ I+ Sbjct: 4 ITDKSECCGCNACGDVCAHNAITFKTDIEGFWYPEIDKDKCTDCGLCEKVCPIVNIEELK 63 Query: 60 EPGLEL 65 + E Sbjct: 64 KNDFEK 69 >gi|256810322|ref|YP_003127691.1| NIL domain protein [Methanocaldococcus fervens AG86] gi|256793522|gb|ACV24191.1| NIL domain protein [Methanocaldococcus fervens AG86] Length = 131 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C+ CP+D Y E + + DEC+ C C CP AI+ Sbjct: 80 EKCVHCG--CCLTQCPIDAIYMDEEYNVVFKEDECVGCKNCMKACPFKAIE 128 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++C+ CG C +CP+DAI D E Sbjct: 80 EKCVHCGCCLTQCPIDAIYMDEE 102 >gi|218678471|ref|ZP_03526368.1| NADH dehydrogenase subunit I [Rhizobium etli CIAT 894] Length = 160 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 115 Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 39 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 81 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 100 CIYCGF--CQEACPVDAIVEGPNF 121 >gi|114771827|ref|ZP_01449220.1| NADH dehydrogenase subunit I [alpha proteobacterium HTCC2255] gi|114547643|gb|EAU50534.1| NADH dehydrogenase subunit I [alpha proteobacterium HTCC2255] Length = 163 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 119 Query: 56 -----KPDTEPGLELWLKINSEYA 74 + TE EL+ N + Sbjct: 120 EGPNFEFATETREELFYNKNKLLS 143 >gi|54611544|gb|AAH21616.2| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Mus musculus] Length = 212 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEPRAD 137 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|70607938|ref|YP_256808.1| indolepyruvate ferredoxin oxidoreductase alpha [Sulfolobus acidocaldarius DSM 639] gi|68568586|gb|AAY81515.1| indolepyruvate ferredoxin oxidoreductase alpha [Sulfolobus acidocaldarius DSM 639] Length = 611 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Query: 9 CILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 C C T C + CP + I CI CG C P CP A IK D G + Sbjct: 550 CTGC--TICYDYFTCPA-IIPRKDKKAEIDVYNCIGCGACVPVCPFKAISIKGDKPEGWD 606 Query: 65 L-WLK 68 WL+ Sbjct: 607 KLWLE 611 >gi|325184975|emb|CCA19467.1| NADH dehydrogenase putative [Albugo laibachii Nc14] Length = 202 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 101 ERCIACKL--CEAICPAQAITIEAEARADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 157 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 101 ERCIACKLCEAICPAQAITIEAEARAD 127 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 142 CIYCGF--CQEACPVDAIVEGPNF 163 >gi|325261134|ref|ZP_08127872.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Clostridium sp. D5] gi|324032588|gb|EGB93865.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Clostridium sp. D5] Length = 860 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C VE CP+ + + I D+C CG C +CP I+ Sbjct: 715 EKCRGCGTCQVVEGCPIKIAELADGKILIDDDKCNHCGRCVGKCPFKVIE 764 >gi|311247106|ref|XP_003122482.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 1 [Sus scrofa] gi|311247126|ref|XP_003122488.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 1 [Sus scrofa] Length = 239 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 138 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 194 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 138 ERCIACKLCEAVCPAQAITIEAEPRAD 164 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 179 CIYCGF--CQEACPVDAIVEGPNF 200 >gi|312898042|ref|ZP_07757448.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Megasphaera micronuciformis F0359] gi|310620867|gb|EFQ04421.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Megasphaera micronuciformis F0359] Length = 645 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Query: 1 MT-YVVTEN-CILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 MT +VV ++ CI CK C+ CP F + I D C+ CGVC CPV+AI Sbjct: 585 MTPFVVDQDKCIGCK--KCLSTGCPALRFDDESRKSNISVD-CVGCGVCAQVCPVNAI 639 >gi|303249219|ref|ZP_07335456.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] gi|302489394|gb|EFL49345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio fructosovorans JJ] Length = 652 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++V + C+ C C+ CP E G+ + C CG+C CP AI+ Sbjct: 577 SHVDIKRCVGCG--KCIMTCPFKAIKEVEFRGQKKAEVIETVCQGCGLCTSTCPQGAIQL 634 Query: 58 DTEPGLELWLKINS 71 E+ ++N+ Sbjct: 635 SHFTDNEILAEVNA 648 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 TYV E C C C E CP D F E I P C Sbjct: 235 TYVDWELCTGCG--ACTEKCPSKKNPDKFNENIGPTTSINIPFPQAIPKKAVIDPTTCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AIK D + Sbjct: 293 FVKGKCGVCAKVCPTGAIKYDMQDE 317 >gi|160936128|ref|ZP_02083501.1| hypothetical protein CLOBOL_01024 [Clostridium bolteae ATCC BAA-613] gi|158440938|gb|EDP18662.1| hypothetical protein CLOBOL_01024 [Clostridium bolteae ATCC BAA-613] Length = 574 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C T C CP +N I ++CI CG C +C AI Sbjct: 524 DKCRGC--TLCARNCPAGAIVGSVKNPHVIDQNKCIKCGACMEKCKFGAIY 572 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D+C C +C CP AI Sbjct: 521 IDRDKCRGCTLCARNCPAGAI 541 >gi|126699405|ref|YP_001088302.1| putative nitrite and sulfite reductase subunit [Clostridium difficile 630] gi|255100934|ref|ZP_05329911.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-63q42] gi|255306823|ref|ZP_05350994.1| putative nitrite and sulfite reductase subunit [Clostridium difficile ATCC 43255] gi|115250842|emb|CAJ68666.1| putative nitrite and sulfite reductase subunit [Clostridium difficile] Length = 315 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +E C+ CK VEVCPV + L I + C +CG C C D+I+ + E G + Sbjct: 169 SELCVGCKKCAVVEVCPVKAAKLTDKGKLEIDSNLCNNCGKCIESCNFDSIE-EKESGYK 227 Query: 65 LWL 67 +++ Sbjct: 228 VYI 230 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 10/57 (17%) Query: 18 VEVCPVDCFYEGENFLAI--------HPDECIDCGVC--EPECPVDAIKPDTEPGLE 64 V CP +C N L I + C+ C C CPV A K + LE Sbjct: 142 VGGCPNNCIKPDLNDLGIVGQRVPDYDSELCVGCKKCAVVEVCPVKAAKLTDKGKLE 198 >gi|121607275|ref|YP_995082.1| RnfABCDGE type electron transport complex subunit B [Verminephrobacter eiseniae EF01-2] gi|121551915|gb|ABM56064.1| electron transport complex, RnfABCDGE type, B subunit [Verminephrobacter eiseniae EF01-2] Length = 220 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 ++ + CI C T C++VCP D + I C C +C P CPVD I DT Sbjct: 86 AFIDEDWCIGC--TLCLKVCPTDAIVGASKMMHTIIERYCTGCELCLPVCPVDCIALDT 142 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 28 EGENFL-AIHPDECIDCGVCEPECPVDAI 55 EG + I D CI C +C CP DAI Sbjct: 80 EGPRSVAFIDEDWCIGCTLCLKVCPTDAI 108 >gi|53712822|ref|YP_098814.1| putative dehydrogenase [Bacteroides fragilis YCH46] gi|52215687|dbj|BAD48280.1| putative dehydrogenase [Bacteroides fragilis YCH46] Length = 607 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +T+ C C +VC + EG + I D+C DCG+CE CP+ I+ Sbjct: 4 ITDKSECCGCNACGDVCAHNAITFKTDIEGFWYPEIDKDKCTDCGLCEKVCPIVNIEELK 63 Query: 60 EPGLEL 65 + E Sbjct: 64 KNDFEK 69 >gi|1171862|sp|P42028|NDUS8_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; AltName: Full=TYKY subunit; Flags: Precursor gi|163418|gb|AAA30664.1| NADH dehydrogenase (ubiquinone) [Bos taurus] gi|296471574|gb|DAA13689.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor [Bos taurus] Length = 212 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAVCPAQAITIEAEPRAD 137 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|310658139|ref|YP_003935860.1| formate dehydrogenase-h, [4fe-4S] ferredoxin subunit [Clostridium sticklandii DSM 519] gi|308824917|emb|CBH20955.1| formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit [Clostridium sticklandii] Length = 179 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTEN--CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +VT C C+ C VCPV ++ + I ++CI C C CP+ A Sbjct: 52 IVTTPIQCRQCEDAPCANVCPVSGIIHQDDKIIIKTEQCIGCKTCILACPIGA 104 >gi|307299479|ref|ZP_07579279.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306914878|gb|EFN45265.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 96 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M +V + C C T C++ CPVD I+ C CG C CPV+AI+P++ Sbjct: 1 MPWVREDLCTGC--TLCLKSCPVDGAIVMQGGKAHINNSLCTRCGDCFSACPVNAIRPNS 58 Query: 60 E 60 E Sbjct: 59 E 59 >gi|254490538|ref|ZP_05103724.1| 4Fe-4S binding domain protein [Methylophaga thiooxidans DMS010] gi|224464282|gb|EEF80545.1| 4Fe-4S binding domain protein [Methylophaga thiooxydans DMS010] Length = 84 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP +G I PD C +C C CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNGAISQGAEIYEIDPDLCTECVGHFDTPQCVEVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPKDPDHEETH 69 >gi|221211649|ref|ZP_03584628.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD1] gi|221169010|gb|EEE01478.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD1] Length = 288 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 80 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCIAMVPI 137 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 138 TGERTGWDAWTQEQADAARE 157 >gi|167725408|ref|ZP_02408644.1| putative molybdopterin oxidoreductase, iron-sulfur binding subunit [Burkholderia pseudomallei DM98] Length = 239 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP + E+ L + D+CI C C CP A + D Sbjct: 83 SCLHCEDPPCVPVCPTGASYKREEDGLVLVDYDKCIGCKYCTWACPYGARELDE 136 >gi|157377554|ref|YP_001476154.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319928|gb|ABV39026.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 563 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 ++ C LC CV CP +G + A+H +C+ CG+CE CP I Sbjct: 430 SDKCTLCL--SCVSTCPTQALTDGGDKPALHFVEQDCVQCGLCESACPEKVI 479 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 6/70 (8%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN------ 70 C+ CP D + + I P C G C CP AI D L ++ Sbjct: 208 CLNFCPADAIQSIDKMITIDPYLCHGAGSCTNACPTGAISYDLPTPQALHSYLHKLVTRF 267 Query: 71 SEYATQWPNI 80 E A P I Sbjct: 268 REQAQTAPVI 277 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 ++I+ D+C C C CP A+ + +++ Sbjct: 426 VSINSDKCTLCLSCVSTCPTQALTDGGDKPALHFVE 461 >gi|134045694|ref|YP_001097180.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132663319|gb|ABO34965.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 397 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C+ C CV CPV + D CI C +C CP +AI Sbjct: 130 TVLDECVGCGV--CVSECPVGAISIENEKAVVDKDSCIYCSICAQTCPWNAIF 180 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V ++ CI C C + CP D +A+ P C CG+C+ CPVDAI Sbjct: 198 VDSDLCIGCGD--CTDKCPKDLIVL-NEMIAVPPKGCPACGLCKAACPVDAI 246 Score = 40.9 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVD-CFYEG-------ENFLAIHP----DECIDCGVCEPECPVDAIK 56 C+ C C++ CP + EG + L P DEC+ CGVC ECPV AI Sbjct: 94 CVGC--MKCIDACPDNYVGMEGVVEPAKRDITLPKEPITVLDECVGCGVCVSECPVGAIS 151 Query: 57 PDTE 60 + E Sbjct: 152 IENE 155 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVD 53 CI C CV+ CP G+ + P C CG C CP D Sbjct: 310 CIRCG--ACVQSCPSGALRMGKITHNGKEYERIEFSPKLCDSCGKCVETCPYD 360 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 12/64 (18%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECP 51 V ++CI C + C + CP + + ++ D CI CG C +CP Sbjct: 157 AVVDKDSCIYC--SICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCP 214 Query: 52 VDAI 55 D I Sbjct: 215 KDLI 218 >gi|71892259|ref|YP_277993.1| NADH dehydrogenase subunit I [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|110287759|sp|Q492I3|NUOI_BLOPB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71796365|gb|AAZ41116.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 181 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 59 ERCVACNL--CAVACPVGCISLKKGESTDGRWYPKFFRINFSRCIFCGMCEEACPTAAIQ 116 Query: 57 PDTEPGLELW 66 + + + Sbjct: 117 LTPDFEMSDF 126 >gi|313157389|gb|EFR56812.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 290 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C CV+VCP F + + +H P+ CI CG C CP A++ P + Sbjct: 13 CIRCG--RCVKVCPSQIFVQEKAGAAVTLHKPENCIVCGHCAAACPTGAVEHADFPAEK 69 >gi|311694181|gb|ADP97054.1| electron transport complex, RnfABCDGE type, B subunit [marine bacterium HP15] Length = 140 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT-EPGLE 64 + CI C T C++ CPVD + + EC C +C CPVD I T EP + Sbjct: 62 DECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVDPCPVDCIDMVTVEPDIR 119 Query: 65 LWL 67 W Sbjct: 120 TWT 122 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 58 VIREDECIGCTKCIQACPVDAI 79 >gi|302388962|ref|YP_003824783.1| BFD domain protein (2Fe-2S)-binding domain protein [Thermosediminibacter oceani DSM 16646] gi|302199590|gb|ADL07160.1| BFD domain protein (2Fe-2S)-binding domain protein [Thermosediminibacter oceani DSM 16646] Length = 204 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + V E C CK C +VCPV + + ++C C CE CP AI Sbjct: 7 LAVVDEEKCRGCK--TCEKVCPVLAIKMVDRKAKVDEEKCRGCAACEQRCPFYAI 59 Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + ++C C CE CPV AIK Sbjct: 9 VVDEEKCRGCKTCEKVCPVLAIKMVDRKA 37 >gi|294788068|ref|ZP_06753312.1| NADH dehydrogenase (ubiquinone), I subunit [Simonsiella muelleri ATCC 29453] gi|294484361|gb|EFG32044.1| NADH dehydrogenase (ubiquinone), I subunit [Simonsiella muelleri ATCC 29453] Length = 159 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CPVDAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 114 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|284049169|ref|YP_003399508.1| Fe-S cluster domain protein [Acidaminococcus fermentans DSM 20731] gi|283953390|gb|ADB48193.1| Fe-S cluster domain protein [Acidaminococcus fermentans DSM 20731] Length = 433 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPG 62 V T +C C CV+ C V I D CIDCG C CP A++ Sbjct: 11 VNTRHCTGCL--ICVKDCLVQAIRVRNGKAVILSDRCIDCGECIRCCPTRAMEGWADPLT 68 Query: 63 LELWLKINSEYAT 75 K+N AT Sbjct: 69 ELKKYKVNIALAT 81 >gi|251780330|ref|ZP_04823250.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084645|gb|EES50535.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 626 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M+Y + + C C + C +CP E + I +CI CG C C AI+ Sbjct: 569 MSYEIDKDKCKGC--SKCARMCPAGAITGEIKKPYTIDQSKCIKCGACMDGCAFKAIQ 624 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D+C C C CP AI + + Sbjct: 571 YEIDKDKCKGCSKCARMCPAGAITGEIKKP 600 >gi|238759969|ref|ZP_04621122.1| NADH-quinone oxidoreductase subunit I [Yersinia aldovae ATCC 35236] gi|238701796|gb|EEP94360.1| NADH-quinone oxidoreductase subunit I [Yersinia aldovae ATCC 35236] Length = 180 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|237747572|ref|ZP_04578052.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378934|gb|EEO29025.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 136 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 27/56 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C++ CV VCP + + + + + CI C C CP A++ ++P + Sbjct: 13 CRQCENAPCVNVCPTNALVYSADTVQLIKERCIGCQTCVLACPFGAMEIVSKPVEQ 68 >gi|152994585|ref|YP_001339420.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Marinomonas sp. MWYL1] gi|150835509|gb|ABR69485.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Marinomonas sp. MWYL1] Length = 83 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP + +G+ I P +C +C C+ CPVD Sbjct: 1 MSLIITDECINCDV--CEPECPNEAISQGDEIYIIDPSKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPLD 62 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 16/29 (55%), Positives = 18/29 (62%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I DECI+C VCEPECP +AI E Sbjct: 1 MSLIITDECINCDVCEPECPNEAISQGDE 29 >gi|15679252|ref|NP_276369.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2622353|gb|AAB85730.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 448 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 CI C C++VCP D E+ L I D+CI CG C CP A+ + E Sbjct: 394 CIGCGL--CLDVCPEDAISRDESGLMIVDDDKCIHCGACSNICPARAVIFERE 444 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAI 55 V T+ CILC+ C CPVD F I P CI CG+C CP DAI Sbjct: 352 VDTDRCILCE--KCGIHCPVDAIPRTTMKKRSIKGGFTLIDPRLCIGCGLCLDVCPEDAI 409 Query: 56 KPDT 59 D Sbjct: 410 SRDE 413 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E+CI C C E+CPVD + + D CI C C CPVDAI Sbjct: 324 VSEDCISCG--ICSELCPVDAITLRRGSIEVDTDRCILCEKCGIHCPVDAI 372 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C C +VCPV + L I P++C C C ECP +AI D Sbjct: 177 CTEC--RVCEDVCPVGAIED----LEIDPEKCTLCLKCMRECPSNAIYIDD 221 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +CI C C+E CP + +C CGVCE CPV++IK + Sbjct: 34 SCITCG--ACMEACPNKAIRRNRYGGYVVDRAKCNACGVCEMTCPVNSIKIED 84 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV+ CP + + CI CG C CP AI+ Sbjct: 16 CVKACPTEAIRMIDGRAF----SCITCGACMEACPNKAIR 51 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C C T C+E CPV + L C+ CG C C V Sbjct: 269 CRDCDETPCIEACPVGTLRMVDGELR---GYCVSCGRCVNVCDV 309 >gi|330994062|ref|ZP_08317992.1| NADH-quinone oxidoreductase subunit I [Gluconacetobacter sp. SXCC-1] gi|329759008|gb|EGG75522.1| NADH-quinone oxidoreductase subunit I [Gluconacetobacter sp. SXCC-1] Length = 162 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C CP + +G I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEATCPAEAITIEAEPRDDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 117 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP +AI + EP + Sbjct: 61 ERCIACKLCEATCPAEAITIEAEPRDD 87 >gi|325262177|ref|ZP_08128915.1| putative pyruvate formate-lyase-activating enzyme [Clostridium sp. D5] gi|324033631|gb|EGB94908.1| putative pyruvate formate-lyase-activating enzyme [Clostridium sp. D5] Length = 296 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCP EN P++CI CG C C +A++ Sbjct: 53 ERCVQCG--ACGSVCPSHAHIFDENKHLFEPEKCIRCGACAEVCCTEALE 100 >gi|312372009|gb|EFR20062.1| hypothetical protein AND_20740 [Anopheles darlingi] Length = 216 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 115 ERCIACKL--CEAICPAQAITIEAEERSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 171 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 115 ERCIACKLCEAICPAQAITIEAEE 138 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 156 CIYCGF--CQEACPVDAIVEGPNF 177 >gi|302833042|ref|XP_002948085.1| NADH:ubiquinone oxidoreductase subunit 8 [Volvox carteri f. nagariensis] gi|300266887|gb|EFJ51073.1| NADH:ubiquinone oxidoreductase subunit 8 [Volvox carteri f. nagariensis] Length = 229 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 184 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 128 ERCIACKLCEAICPAQAITIEAEERED 154 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 169 CIYCGF--CQEACPVDAIVEGPNF 190 >gi|317050799|ref|YP_004111915.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfurispirillum indicum S5] gi|316945883|gb|ADU65359.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfurispirillum indicum S5] Length = 176 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 24/104 (23%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF----------YEGE-------NFLAIHPDECIDCGV 45 Y + E CI C CV+ CP+D +G+ + + ECI CG+ Sbjct: 68 YFIEEKCIACN--MCVKACPIDVIQLEFHREDREVDGKVKKVPVIDKYTVDIGECISCGL 125 Query: 46 CEPECPVDAIKPDTEPGLELWLK----INS-EYATQWPNITTKK 84 C CP DA+ E + K +N E A +P KK Sbjct: 126 CAEHCPTDAVFQSQEYETAYYYKELFVMNKDELAMTFPEYIEKK 169 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPD 58 L ++CI C +C CP+D I+ + Sbjct: 67 LYFIEEKCIACNMCVKACPIDVIQLE 92 >gi|218883674|ref|YP_002428056.1| Indolepyruvate oxidoreductase subunit iorA [Desulfurococcus kamchatkensis 1221n] gi|218765290|gb|ACL10689.1| Indolepyruvate oxidoreductase subunit iorA [Desulfurococcus kamchatkensis 1221n] Length = 637 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 23/62 (37%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 +V + CI C + CP G I + C CG+C CP AI P Sbjct: 572 IVEDKCIGCMACVNLTACPAIIVPAGSKKPIILEELCNGCGLCASICPYKAITVKNTPSP 631 Query: 64 EL 65 E Sbjct: 632 EW 633 >gi|167754888|ref|ZP_02427015.1| hypothetical protein CLORAM_00392 [Clostridium ramosum DSM 1402] gi|167704938|gb|EDS19517.1| hypothetical protein CLORAM_00392 [Clostridium ramosum DSM 1402] Length = 257 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V E CI C C++VCP++ E + I D C+ C C CP AI E +E Sbjct: 176 VDEKCIGC--QTCIKVCPMNNIELIEGKIKI-KDNCMTCLACFHWCPTAAIYMSKEKEIE 232 >gi|149378171|ref|ZP_01895888.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter algicola DG893] gi|149357533|gb|EDM46038.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Marinobacter algicola DG893] Length = 192 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT-EPGLE 64 + CI C T C++ CPVD + + EC C +C CPVD I T EP + Sbjct: 114 DECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVEPCPVDCIDMITIEPDIR 171 Query: 65 LWL 67 W Sbjct: 172 SWT 174 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDC---FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D + + I DECI C C CPVDAI Sbjct: 91 VEPQPLDAEHGVEQAKRVAVIREDECIGCTKCIQACPVDAI 131 >gi|160881922|ref|YP_001560890.1| NADH dehydrogenase (quinone) [Clostridium phytofermentans ISDg] gi|160430588|gb|ABX44151.1| NADH dehydrogenase (quinone) [Clostridium phytofermentans ISDg] Length = 595 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAI 55 ++Y + + C C T C CP + EG+ I D+CI CG C +C AI Sbjct: 538 LSYTIDADMCKGC--TLCARTCPNNAI-EGKVREPHVIIQDKCIKCGACMEKCKFGAI 592 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 12/31 (38%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I D C C +C CP +AI+ Sbjct: 540 YTIDADMCKGCTLCARTCPNNAIEGKVREPH 570 >gi|126437798|ref|YP_001073489.1| putative glutamate synthase (NADPH) small subunit [Mycobacterium sp. JLS] gi|126237598|gb|ABO00999.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Mycobacterium sp. JLS] Length = 558 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 8 NCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 NC C C CP D EG + D C CG C +CPV AI+ E Sbjct: 504 NCFECDG--CYGACPEDAIIKVAEGHHGYEFVYDRCTGCGACFEQCPVHAIEMLPE 557 >gi|78222455|ref|YP_384202.1| ferredoxin family protein [Geobacter metallireducens GS-15] gi|78193710|gb|ABB31477.1| Ferredoxin family protein [Geobacter metallireducens GS-15] Length = 96 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 E CI C CV VCP F +G D C++CG C CPV AI+ D+ Sbjct: 18 EACIGCG--MCVAVCPHGVFALQGNKAEMQDFDACMECGACAVNCPVGAIEVDS 69 >gi|326562847|gb|EGE13135.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 103P14B1] gi|326577018|gb|EGE26913.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 101P30B1] Length = 182 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L + + N Y + I+ + Sbjct: 118 LTPDFELGEYDRQNLVYEKEHLLISGVGKYPE 149 >gi|262376638|ref|ZP_06069866.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308348|gb|EEY89483.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 87 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + Y GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCDV--CEPVCPNEAIYMGELIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P +E ++ ++Y Sbjct: 59 I-PLDPNHVETQEQLQAKY 76 >gi|262274542|ref|ZP_06052353.1| electron transport complex protein RnfB [Grimontia hollisae CIP 101886] gi|262221105|gb|EEY72419.1| electron transport complex protein RnfB [Grimontia hollisae CIP 101886] Length = 194 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ ++CI C T C++ CPVD + + DEC C +C CP D I+ Sbjct: 107 AFIHEDDCIGC--TKCIQACPVDAIVGSTKAMHTVIKDECTGCDLCVAPCPTDCIE 160 >gi|222444426|ref|ZP_03606941.1| hypothetical protein METSMIALI_00037 [Methanobrevibacter smithii DSM 2375] gi|222433991|gb|EEE41156.1| hypothetical protein METSMIALI_00037 [Methanobrevibacter smithii DSM 2375] Length = 343 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD 53 CI CK C++ CPV + E + + ++P +CI CG C CPV+ Sbjct: 128 CIRCK--KCMKQCPVGAIHVEDDGKVVVNPFKCISCGECLDVCPVN 171 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 18/69 (26%) Query: 8 NCILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCEPECP 51 CI C C EVCP + + I CI C C +CP Sbjct: 82 ACIRCGF--CAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFIIDDYLCIRCKKCMKQCP 139 Query: 52 VDAIKPDTE 60 V AI + + Sbjct: 140 VGAIHVEDD 148 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 13/61 (21%) Query: 4 VVTENCILCKHTDCVEVCP-----------VDCFYEGENFLAIHPDECIDCGVCEPECPV 52 V+ E CI C C+ CP D EG + I+ CI CG C CP Sbjct: 38 VIKEYCIGCG--ACISSCPSPNAIKLVRDEDDETKEGITYPIINKSACIRCGFCAEVCPT 95 Query: 53 D 53 + Sbjct: 96 E 96 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +E C C C+ CP E + + + ++C+ C +C CP IK Sbjct: 259 SETCKKC--QMCIPDCPTKAISFDEKNDTIVRNENKCLRCSICYQSCPFSTIKY 310 >gi|212704668|ref|ZP_03312796.1| hypothetical protein DESPIG_02731 [Desulfovibrio piger ATCC 29098] gi|212671902|gb|EEB32385.1| hypothetical protein DESPIG_02731 [Desulfovibrio piger ATCC 29098] Length = 653 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V + C+ C C+ CP E GE + C CGVC CP AI+ Sbjct: 580 VDNKRCVACG--KCIRCCPFGAITEVEFRGEKKAQVIETVCQGCGVCTSTCPQGAIQLSH 637 Query: 60 EPGLELWLKINS 71 ++ ++N+ Sbjct: 638 ATDNQILAEVNA 649 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYE---------------GENFLAIHPDECID 42 TYV C C C E CP D F E I+P+ C Sbjct: 235 TYVDWSLCTGCG--ACTEKCPSKKTPDAFNEFTGPTTAINIAFPQAIPKKAVINPEYCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AIK D + Sbjct: 293 MTKGKCGVCAKVCPTGAIKYDMQDE 317 >gi|194745003|ref|XP_001954982.1| GF16476 [Drosophila ananassae] gi|190628019|gb|EDV43543.1| GF16476 [Drosophila ananassae] Length = 217 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|123441683|ref|YP_001005667.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. enterocolitica 8081] gi|156633543|sp|A1JLI2|NUOI_YERE8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|122088644|emb|CAL11439.1| NADH Dehydrogenase I chain I [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 180 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|21226237|ref|NP_632159.1| ferredoxin oxidoreductase [Methanosarcina mazei Go1] gi|20904473|gb|AAM29831.1| Ferredoxin oxidoreductase [Methanosarcina mazei Go1] Length = 438 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI CK E CP+ +GEN +P+ C +CG+C C +A Sbjct: 333 CINCKVCPVAEACPMGAVSKGENGAEHNPELCFNCGLCISRCRGEA 378 >gi|30248970|ref|NP_841040.1| 3Fe-4S ferredoxin [Nitrosomonas europaea ATCC 19718] gi|30138587|emb|CAD84878.1| 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain [Nitrosomonas europaea ATCC 19718] Length = 89 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I D C +C C CPV Sbjct: 1 MALIITDECINCDV--CEPECPNRAISQGEEIYEIDSDLCTECVGHYNTPQCVEVCPVSC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IVGDPD 64 >gi|114319377|ref|YP_741060.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114225771|gb|ABI55570.1| phenylacetyl-CoA:acceptor oxidoreductase PadC subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 249 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C+ CV VCP Y+ + + + ++CI C C CP E L Sbjct: 57 PCMQCEDPSCVHVCPTRATYKDPDAGGIVFVDWNKCIGCKYCMIACPYGVRFYADEQPL 115 >gi|294778024|ref|ZP_06743458.1| glycyl-radical enzyme activating family protein [Bacteroides vulgatus PC510] gi|294448082|gb|EFG16648.1| glycyl-radical enzyme activating family protein [Bacteroides vulgatus PC510] Length = 302 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C++ CP + +C+ CG C ECP AI+ Sbjct: 53 CLGCG--TCLKACPNGALTLAPEGIITDKQKCVLCGRCAEECPAMAIE 98 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 9/42 (21%) Query: 21 CPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C G++ L +C+ CG C CP A Sbjct: 27 CPLSCIWCHNPEGIRNGKDKLY-TAKKCLGCGTCLKACPNGA 67 >gi|289662868|ref|ZP_06484449.1| ferredoxin [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 139 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++V +CI C T C++ CPVD G + I P C C +C P CPVD I+ Sbjct: 81 AWIVEADCIGC--TKCIQACPVDAIVGGAKHMHTVIAP-LCTGCELCLPACPVDCIE 134 >gi|288573330|ref|ZP_06391687.1| Fe-S cluster domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569071|gb|EFC90628.1| Fe-S cluster domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 436 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V C C C++VCP + + + I P+ C+DCG C +C AI Sbjct: 8 VQLSACRGC--ARCIKVCPTEAMRVLDGKVMIIPELCVDCGECIRKCEDRAI 57 >gi|254793288|ref|YP_003078125.1| putative 4Fe-4S ferridoxin-type protein [Escherichia coli O157:H7 str. TW14359] gi|254592688|gb|ACT72049.1| predicted 4Fe-4S ferridoxin-type protein [Escherichia coli O157:H7 str. TW14359] Length = 222 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|288941047|ref|YP_003443287.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Allochromatium vinosum DSM 180] gi|288896419|gb|ADC62255.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Allochromatium vinosum DSM 180] Length = 205 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C + C+ VCP + N + + + C+ CG C CP A P T + Sbjct: 61 CNHCDNPPCMTVCPTGATQKKANGIVFVDQELCMGCGACAMACPYHARVPVTRRDMRQ 118 >gi|237665790|ref|ZP_04525778.1| dihydroorotate dehydrogenase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658737|gb|EEP56289.1| dihydroorotate dehydrogenase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 362 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C C + CP +N + I C CG+CE CP AI Sbjct: 312 DKCTNC--RLCEKACPYFAITSIDNQIKIDTKNCFGCGLCESRCPSKAIY 359 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 + I+ D+C +C +CE CP AI Sbjct: 304 PEYPLINKDKCTNCRLCEKACPYFAI 329 >gi|222529000|ref|YP_002572882.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Caldicellulosiruptor bescii DSM 6725] gi|222455847|gb|ACM60109.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Caldicellulosiruptor bescii DSM 6725] Length = 598 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIK 56 + + +NC+ CK V CP E EN + I C CG+C+ CP AI+ Sbjct: 540 FKINQNCLKCKVCLNVTGCP--AIDEDENGNIFIDSVLCKGCGLCKNFCPYYAIE 592 >gi|198274020|ref|ZP_03206552.1| hypothetical protein BACPLE_00157 [Bacteroides plebeius DSM 17135] gi|198273098|gb|EDY97367.1| hypothetical protein BACPLE_00157 [Bacteroides plebeius DSM 17135] Length = 268 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKPDTE 60 T+ C C +C+EVCP + E+ +I D +CI C C CP +A + T Sbjct: 195 TDGCFACG--ECIEVCPTHAIHFSEDQSSIETDIHKCIKCCACVKCCPNEAREFSTP 249 >gi|240849392|ref|NP_001155795.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondri [Acyrthosiphon pisum] gi|239789288|dbj|BAH71275.1| ACYPI009382 [Acyrthosiphon pisum] Length = 206 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 146 CIYCGF--CQEACPVDAIVEGPNFEY 169 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 105 ERCIACKLCEAICPAQAITIEAEERAD 131 >gi|126460291|ref|YP_001056569.1| putative ATPase RIL [Pyrobaculum calidifontis JCM 11548] gi|126250012|gb|ABO09103.1| ABC transporter related [Pyrobaculum calidifontis JCM 11548] Length = 589 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 9/65 (13%) Query: 7 ENC--ILCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C H +CV+ CPV+ E I CI CG+C +CP DAI Sbjct: 10 DACQPRKCGH-ECVKYCPVNKSGKVVYIDEQLKKAVISEALCIGCGICVHKCPFDAITIV 68 Query: 59 TEPGL 63 P Sbjct: 69 NLPDE 73 >gi|15897231|ref|NP_341836.1| putative ATPase RIL [Sulfolobus solfataricus P2] gi|284174476|ref|ZP_06388445.1| putative ATPase RIL [Sulfolobus solfataricus 98/2] gi|13813430|gb|AAK40626.1| RNase L inhibitor [Sulfolobus solfataricus P2] gi|261601897|gb|ACX91500.1| ABC transporter related protein [Sulfolobus solfataricus 98/2] Length = 600 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD E I+ + CI CG+C +CP +AI + E + Sbjct: 20 CINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 79 Query: 64 ELWLKIN 70 K+N Sbjct: 80 IHRYKVN 86 >gi|46195430|ref|NP_659119.2| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor [Mus musculus] gi|47117242|sp|Q8K3J1|NDUS8_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|22074762|gb|AAM34451.1| NADH dehydrogenase:ubiquinone Fe-S protein 8 [Mus musculus] gi|56540975|gb|AAH86766.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Mus musculus] gi|74139889|dbj|BAE31784.1| unnamed protein product [Mus musculus] gi|74150399|dbj|BAE32243.1| unnamed protein product [Mus musculus] gi|74204045|dbj|BAE29018.1| unnamed protein product [Mus musculus] gi|74204318|dbj|BAE39914.1| unnamed protein product [Mus musculus] gi|74227922|dbj|BAE37960.1| unnamed protein product [Mus musculus] gi|148701022|gb|EDL32969.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, isoform CRA_a [Mus musculus] gi|148701023|gb|EDL32970.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, isoform CRA_a [Mus musculus] Length = 212 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAICPAQAITIEAEPRAD 137 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|330998795|ref|ZP_08322523.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family [Parasutterella excrementihominis YIT 11859] gi|329576292|gb|EGG57808.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family [Parasutterella excrementihominis YIT 11859] Length = 468 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFL-AI-HPDECIDCGVCEPECPVDAIKPDTE 60 NC+ C +C VCP + G++ + I + D C CGVC ECP AIK + E Sbjct: 413 NCLQCD--NCYGVCPDNAVIKTGDDNVPYIFNYDYCKGCGVCASECPCGAIKMEPE 466 >gi|319782990|ref|YP_004142466.1| NADH-quinone oxidoreductase, chain I [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168878|gb|ADV12416.1| NADH-quinone oxidoreductase, chain I [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 163 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 119 VEGPNFEFATETREELYYDKDRLLA 143 >gi|304315176|ref|YP_003850323.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] gi|302588635|gb|ADL59010.1| HycB-related protein [Methanothermobacter marburgensis str. Marburg] Length = 128 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 19/51 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C C+ C V F I P+ C+ C +C CP I + Sbjct: 40 CRQCSDAPCLRACRVGAFKIINKIPVIDPERCVGCRLCLEACPEGCIIFED 90 >gi|291280504|ref|YP_003497339.1| ferredoxin-dependent glutamate synthase subunit beta [Deferribacter desulfuricans SSM1] gi|290755206|dbj|BAI81583.1| ferredoxin-dependent glutamate synthase, beta subunit [Deferribacter desulfuricans SSM1] Length = 777 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 9/54 (16%) Query: 7 ENCILCKHTD----CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECP 51 + C+ C C +VCP +G P++CI CG+C CP Sbjct: 708 DRCMSCGFCRDCEMCKDVCPEQAIVRIQNDDGTFEYYSDPNKCIGCGICAGVCP 761 >gi|269215524|ref|ZP_06159378.1| indolepyruvate ferredoxin oxidoreductase, IorA subunit [Slackia exigua ATCC 700122] gi|269131011|gb|EEZ62086.1| indolepyruvate ferredoxin oxidoreductase, IorA subunit [Slackia exigua ATCC 700122] Length = 580 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y V +C CK CV++ CP F N +I P C+ C C CP I ++E Sbjct: 522 YAVKPDCRGCK--MCVQIGCPSISFDLSSNVASIDPALCVGCSQCAQVCPFSVIVKESEA 579 >gi|262165512|ref|ZP_06033249.1| NrfC protein [Vibrio mimicus VM223] gi|262025228|gb|EEY43896.1| NrfC protein [Vibrio mimicus VM223] Length = 228 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACPYQ 145 >gi|221199573|ref|ZP_03572617.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD2M] gi|221205527|ref|ZP_03578542.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD2] gi|221174365|gb|EEE06797.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD2] gi|221180858|gb|EEE13261.1| electron transport complex, rnfaBcdge type, b subunit [Burkholderia multivorans CGD2M] Length = 288 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 80 AFIDENLCIGC--TLCMQACPVDAIVGAPKQMHTIVASLCTGCDLCVPPCPVDCIAMVPV 137 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 138 TGERTGWDAWTQEQADAARE 157 >gi|126656501|ref|ZP_01727762.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] gi|126622187|gb|EAZ92894.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Cyanothece sp. CCY0110] Length = 120 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 8/59 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVD 53 M+Y +T CI C C CP +N I C DC C CP + Sbjct: 1 MSYTITNECINC--HRCRSACPTGAITIQDNVFLIDATLCNDCHGYYGTPQCASVCPTN 57 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 +ECI+C C CP AI Sbjct: 1 MSYTITNECINCHRCRSACPTGAI 24 >gi|116749158|ref|YP_845845.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Syntrophobacter fumaroxidans MPOB] gi|116698222|gb|ABK17410.1| glutamate synthase (NADPH) GltB3 subunit [Syntrophobacter fumaroxidans MPOB] Length = 777 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 8/50 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN------FLAIHPDECIDCGVCEPECP 51 C C CV +CP E + + PD CI CG C CP Sbjct: 717 ACRDCG--ICVTMCPQTAISRQEKDNPFGFEMVVDPDRCIGCGFCAGSCP 764 >gi|319940750|ref|ZP_08015091.1| hydrogenase [Sutterella wadsworthensis 3_1_45B] gi|319805810|gb|EFW02584.1| hydrogenase [Sutterella wadsworthensis 3_1_45B] Length = 456 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ ++C+ C C + CP D G I D C+ CG C CP +AI+ Sbjct: 39 HINKDHCVGCD--TCRKFCPTDAIKGGLGAKHEIIDDACLYCGQCLVACPFNAIEQ 92 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 + I+ D C+ C C CP DAIK Sbjct: 38 IHINKDHCVGCDTCRKFCPTDAIK 61 >gi|308049947|ref|YP_003913513.1| electron transport complex, RnfABCDGE type, B subunit [Ferrimonas balearica DSM 9799] gi|307632137|gb|ADN76439.1| electron transport complex, RnfABCDGE type, B subunit [Ferrimonas balearica DSM 9799] Length = 184 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ CI C T C++ CPVD G+ + D+C C +C CPVD I+ Sbjct: 107 AYIREAECIGC--TKCIQACPVDAIIGTGKQMHTVLADQCTGCDLCVEPCPVDCIE 160 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 18 VEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D + I ECI C C CPVDAI Sbjct: 91 VEPEPLDADADSRPKVAYIREAECIGCTKCIQACPVDAI 129 >gi|305432890|ref|ZP_07402048.1| ferredoxin [Campylobacter coli JV20] gi|304444044|gb|EFM36699.1| ferredoxin [Campylobacter coli JV20] Length = 113 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 14/65 (21%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCG------VCEP 48 M +T++CI C C++ CPV EGE+ ++ D+C++C C Sbjct: 20 MAVKITDSCIACG--SCIDECPVSAIVDDANNPEGEDRYYVYADKCVECVGHNDQPACAS 77 Query: 49 ECPVD 53 CP D Sbjct: 78 ACPTD 82 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 15/30 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 G+ D CI CG C ECPV AI D Sbjct: 17 GDKMAVKITDSCIACGSCIDECPVSAIVDD 46 >gi|294102249|ref|YP_003554107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] gi|293617229|gb|ADE57383.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminobacterium colombiense DSM 12261] Length = 220 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V E CI C T C CPV+ E + I ++C+ CG C CP DAI Sbjct: 153 VDEEKCIGC--TKCARNCPVNAISGELKKPHVIDKEKCVGCGKCAELCPKDAIHQ 205 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 E CI CK C+ VCP + E E + IH D C C C CPV Sbjct: 64 ERCIGCKL--CIRVCPANAIEFLEEEKKIQIHVDRCCFCAQCTEICPVKC 111 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%) Query: 24 DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 D E + ++CI C C CPV+AI + + Sbjct: 142 DIVVESAVKYEVDEEKCIGCTKCARNCPVNAISGELKKPH 181 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEP 61 + CI C +C CP +AI+ E Sbjct: 62 DKERCIGCKLCIRVCPANAIEFLEEE 87 >gi|224369237|ref|YP_002603401.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacterium autotrophicum HRM2] gi|223691954|gb|ACN15237.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfobacterium autotrophicum HRM2] Length = 355 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 V ++ C C+ C+E C +D ++ ++ D CI CG+C CP AI + + Sbjct: 272 ARVDSDLCTGCE--TCLERCQMDAILLDQDMHALVNRDRCIGCGLCVTTCPTAAITLEQK 329 Query: 61 PGL 63 Sbjct: 330 DTD 332 >gi|254173159|ref|ZP_04879832.1| hydrogenase-4 component b [Thermococcus sp. AM4] gi|214032568|gb|EEB73397.1| hydrogenase-4 component b [Thermococcus sp. AM4] Length = 201 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYE-----GENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E CI C CV CP D E G L + CI C C CP A+ Sbjct: 47 PHINPEKCIGCG--ACVNACPPDALILEWDKEHGVKRLTFNAARCIRCHRCVEVCPTGAM 104 Query: 56 KP 57 +P Sbjct: 105 EP 106 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 17/30 (56%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P++CI CG C CP DA+ + + Sbjct: 48 HINPEKCIGCGACVNACPPDALILEWDKEH 77 >gi|254173494|ref|ZP_04880166.1| RNase L inhibitor [Thermococcus sp. AM4] gi|214032186|gb|EEB73016.1| RNase L inhibitor [Thermococcus sp. AM4] Length = 589 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP +AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYRPVIQEASCTGCGICVHKCPFNAI 66 >gi|210615651|ref|ZP_03290697.1| hypothetical protein CLONEX_02915 [Clostridium nexile DSM 1787] gi|210150194|gb|EEA81203.1| hypothetical protein CLONEX_02915 [Clostridium nexile DSM 1787] Length = 263 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 CI CK C +VCP D +N I P++C +CG+C +CP Sbjct: 218 CIGCK--MCQKVCPSDAIVVEDNIAHIDPEKCTNCGLCAEKCP 258 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 CV+ CP D + + + D C CG C CP Sbjct: 146 GFGSCVKACPFDAIHIVDGVAVVDKDACKACGKCVAACP 184 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 18/75 (24%) Query: 2 TYVVTENCILCKHTDCVEVCP--------------VDCFYE--GENFLAIHPDECIDCGV 45 V + C C CV CP V C + G++ L++ CI C + Sbjct: 166 AVVDKDACKACG--KCVAACPKHLVELVPYEQKHLVQCSSKDKGKDVLSVCKVGCIGCKM 223 Query: 46 CEPECPVDAIKPDTE 60 C+ CP DAI + Sbjct: 224 CQKVCPSDAIVVEDN 238 >gi|188589360|ref|YP_001921432.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum E3 str. Alaska E43] gi|188499641|gb|ACD52777.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum E3 str. Alaska E43] Length = 626 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M+Y + + C C + C +CP E + I +CI CG C C AI+ Sbjct: 569 MSYEIDKDKCKGC--SKCARMCPAGAITGEIKKPYTIDQSKCIKCGACMDGCAFKAIQ 624 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D+C C C CP AI + + Sbjct: 571 YEIDKDKCKGCSKCARMCPAGAITGEIKKP 600 >gi|170581266|ref|XP_001895608.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Brugia malayi] gi|158597368|gb|EDP35534.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Brugia malayi] Length = 206 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEARPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 161 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 146 CIYCGL--CQEACPVDAIVEGPNFEY 169 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 105 ERCIACKLCEAICPAQAITIEAEA 128 >gi|117925794|ref|YP_866411.1| hydrogenase 2 protein HybA [Magnetococcus sp. MC-1] gi|117609550|gb|ABK45005.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Magnetococcus sp. MC-1] Length = 340 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C+ C CV CPV + H D CI C C CP + + + + Sbjct: 113 SCMHCVDPGCVSACPVTAMRRNSLTGIVTHHADACIGCRTCMTGCPYNVPQFEYDKPFGQ 172 >gi|328952561|ref|YP_004369895.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452885|gb|AEB08714.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1042 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 31/92 (33%), Gaps = 32/92 (34%) Query: 3 YVVTENCILCKHTDCVEVCPVDC---FYEGEN---------------FLAIHPDECI--- 41 Y+ + CI C C E CP F EG N AI PD CI Sbjct: 118 YIDMDRCIACGV--CAEKCPYKAADEFNEGLNQRKAAYVKYPQAVPLKYAIDPDRCIYFK 175 Query: 42 --------DCGVCEPECPVDAI-KPDTEPGLE 64 CG CE CP A+ D + + Sbjct: 176 PDKKGKIGRCGACEKFCPAGAVNFLDVDQEQQ 207 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 15/56 (26%) Query: 9 CILCKHTDCVEVCPVDCF---------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C CP Y EN A C CGVC CP AI Sbjct: 969 CIGCGL--CEASCPFAAIRLIQVPGKGYRAENITA----SCKGCGVCAAACPQRAI 1018 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + CI CG+CE CP AI+ Sbjct: 964 VDAYLCIGCGLCEASCPFAAIR 985 >gi|319789166|ref|YP_004150799.1| NIL domain protein [Thermovibrio ammonificans HB-1] gi|317113668|gb|ADU96158.1| NIL domain protein [Thermovibrio ammonificans HB-1] Length = 138 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 E C+ C C+ CP + FY D+C+ CG C P CP+ I Sbjct: 85 EKCVHCG--ACIAPCPTNAFYLDRETFRVEFDKDKCVGCGHCIPACPLRIIY 134 Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 ++C+ CG C CP +A D E Sbjct: 85 EKCVHCGACIAPCPTNAFYLDRE 107 >gi|302390108|ref|YP_003825929.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermosediminibacter oceani DSM 16646] gi|302200736|gb|ADL08306.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermosediminibacter oceani DSM 16646] Length = 584 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 3 YVVTEN-CILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y ++E C C C+ + CP + + I+P C+ C VC CP AI+ Sbjct: 528 YTISEEKCRRC--RMCLRLGCP--AIQVRGDVIFINPINCVGCAVCVQVCPFGAIE 579 >gi|260892082|ref|YP_003238179.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] gi|260864223|gb|ACX51329.1| NADH dehydrogenase (quinone) [Ammonifex degensii KC4] Length = 626 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V+ E CI C C VCPV E + I C+ CG C C A+K Sbjct: 571 FVILAEKCIGCG--ACAYVCPVKAIKGEKKKPHHIDEKVCVKCGRCFEICRFQAVK 624 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 VTE C +C+ + I ++CI CG C CPV AIK + + Sbjct: 555 VTE--RRCSAGECMAL----------RRFVILAEKCIGCGACAYVCPVKAIKGEKKKPH 601 >gi|209737012|gb|ACI69375.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Salmo salar] Length = 210 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 109 ERCIACKLCEAICPAQAITIEAEP 132 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|85860877|ref|YP_463079.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] gi|85723968|gb|ABC78911.1| NADH:ubiquinone oxidoreductase, NADH-binding subunit [Syntrophus aciditrophicus SB] Length = 642 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 2 TYVV-TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECP 51 YV+ E C C CV+ CP G++ ++I ++C CG C CP Sbjct: 561 AYVIDPEQCRAC--QLCVKKCPAGAIDGGKDLVSIIDQEKCTKCGTCFEVCP 610 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 I P++C C +C +CP AI Sbjct: 562 YVIDPEQCRACQLCVKKCPAGAI 584 >gi|87196499|ref|NP_777243.2| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor [Bos taurus] gi|81674803|gb|AAI09907.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Bos taurus] Length = 212 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAVCPAQAIIIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAVCPAQAIIIEAEPRAD 137 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|15678429|ref|NP_275544.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] gi|2621463|gb|AAB84907.1| polyferredoxin [Methanothermobacter thermautotrophicus str. Delta H] Length = 337 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ + CI C CV+ CPV D C+ CG C CPVDAI+ Sbjct: 199 VLEDRCIGCGL--CVDECPVGVIEPEVPAPVKILDGCVFCGRCRGVCPVDAIE 249 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C CV CPVD + + D CI CG C+ CPV A++ + E Sbjct: 284 CQRCGV--CVNHCPVDAMTLNTE-VEVDADRCILCGECQDICPVTAVRLNLEDD 334 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 2 TYVVTE-NCILCKHTDCVEVCP-VDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKP 57 V+ + +CI C C VCP G I P C C C CP AI+ Sbjct: 47 AVVINQRDCIGC--MTCTRVCPSRGAIKVGKINRLPYIDPSYCARCEECMDVCPSAAIRY 104 Query: 58 DTEP-GLELWLKIN 70 + E + K+N Sbjct: 105 SSRKRAYENFSKLN 118 Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPG 62 D CI CG+C ECPV I+P+ Sbjct: 202 DRCIGCGLCVDECPVGVIEPEVPAP 226 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPV-DAIK 56 + C+ C + C CP + GE + I+ +CI C C CP AIK Sbjct: 15 DKCVRCSY--CARACPTEAIKYGEILPRSVVGGKAVVINQRDCIGCMTCTRVCPSRGAIK 72 Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 14/30 (46%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E I D+C+ C C CP +AIK Sbjct: 5 ETGVHSEIDEDKCVRCSYCARACPTEAIKY 34 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 24/80 (30%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL----------------------AIHPDECID 42 + + C+ C C VCPVD E + C Sbjct: 229 ILDGCVFCG--RCRGVCPVDAIEITEEGFRARDGRIYLERRVLTGPRRGSVEVDHMVCQR 286 Query: 43 CGVCEPECPVDAIKPDTEPG 62 CGVC CPVDA+ +TE Sbjct: 287 CGVCVNHCPVDAMTLNTEVE 306 >gi|50085926|ref|YP_047436.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter sp. ADP1] gi|49531902|emb|CAG69614.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter sp. ADP1] Length = 87 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +TE CI C C VCP + Y GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITEECINCDV--CEPVCPNEAIYMGELIYEIHPDLCTECVGHFDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D + Sbjct: 59 IPKDPDHEETQ 69 >gi|330958152|gb|EGH58412.1| NADH dehydrogenase subunit I [Pseudomonas syringae pv. maculicola str. ES4326] Length = 174 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G +F I+ CI CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQ 117 Query: 57 PDTEPGLELW 66 + + + Sbjct: 118 LTPDFEMADF 127 >gi|303243651|ref|ZP_07329992.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302485893|gb|EFL48816.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 426 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y++ EN CI C C +VC VD I+P+ C+ CG+C ECPVDAI Sbjct: 312 YIIDENKCIGC--RICYKVCNVDNAISISSETRLPYINPEYCVRCGLCYRECPVDAI 366 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGLEL 65 E C+ C + C VCPVD I + CI C C CPV DAIK E L+ Sbjct: 126 ELCVNC--SSCKLVCPVDAIDYNGVSHVIDKNICIGCNRCIDACPVIDAIKTYDEKILKE 183 Query: 66 WLK 68 + Sbjct: 184 KID 186 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 12/63 (19%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPVD-AIKP 57 CI C +C+EVCP + GE I ++CI C +C C VD AI Sbjct: 280 ECIKCG--ECIEVCPTNAMRIGEIPRIPKIRDKCYIIDENKCIGCRICYKVCNVDNAISI 337 Query: 58 DTE 60 +E Sbjct: 338 SSE 340 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 17/63 (26%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF---------------LAIHPDECIDCGVCEPECPV 52 +CI C +CVE CP G L I + C++C C+ CPV Sbjct: 83 SCISCG--NCVESCPTKVLEIGVLMKETEGLPWNVPKYTNLIIDEELCVNCSSCKLVCPV 140 Query: 53 DAI 55 DAI Sbjct: 141 DAI 143 Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 7/51 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V CI C +CV+VCP + + +N+ + ECI CG C CP +A Sbjct: 252 IVKSLCISCG--NCVDVCPG--YIDLKNYNVV---ECIKCGECIEVCPTNA 295 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 8/61 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA------IHPDECIDCGVCEPECPVDAI 55 T V E CI C C CP N I CI CG C CP + Sbjct: 42 TVVYPEKCISCG--ACKGSCPSFAIELVNNPKYNKKIPEIDVGSCISCGNCVESCPTKVL 99 Query: 56 K 56 + Sbjct: 100 E 100 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 17/28 (60%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++P++CI CG C+ CP AI+ P Sbjct: 43 VVYPEKCISCGACKGSCPSFAIELVNNP 70 >gi|288931276|ref|YP_003435336.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Ferroglobus placidus DSM 10642] gi|288893524|gb|ADC65061.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Ferroglobus placidus DSM 10642] Length = 97 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +V E CI C CV+ CP C +G + D C CG+C CPV+AI+ Sbjct: 29 AFVDEEKCIGCG--RCVKFCPEPCIELVEKDGNKVAKVDHDYCKGCGICASVCPVNAIRM 86 Query: 58 DTEP 61 +T+ Sbjct: 87 ETKE 90 >gi|218260395|ref|ZP_03475734.1| hypothetical protein PRABACTJOHN_01397 [Parabacteroides johnsonii DSM 18315] gi|218224549|gb|EEC97199.1| hypothetical protein PRABACTJOHN_01397 [Parabacteroides johnsonii DSM 18315] Length = 184 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 ++ E C C T C +CPV+ G+ + I P CI CG C C AI Sbjct: 130 FINPEKCKGC--TLCARMCPVNAIT-GDKKVPHVIDPQTCIRCGSCIERCKFGAIY 182 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P++C C +C CPV+AI D + Sbjct: 128 QYFINPEKCKGCTLCARMCPVNAITGDKKVPH 159 >gi|154500597|ref|ZP_02038635.1| hypothetical protein BACCAP_04270 [Bacteroides capillosus ATCC 29799] gi|150270486|gb|EDM97795.1| hypothetical protein BACCAP_04270 [Bacteroides capillosus ATCC 29799] Length = 557 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV ++ I PDECI CG C CP +A Sbjct: 11 NCKNC--YKCIRNCPVKSIRFSDHQANIVPDECILCGRCFVACPQNA 55 >gi|187927967|ref|YP_001898454.1| ferredoxin [Ralstonia pickettii 12J] gi|187724857|gb|ACD26022.1| electron transport complex, RnfABCDGE type, B subunit [Ralstonia pickettii 12J] Length = 276 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP----DTEP 61 E CI C T C++ CPVD + + D C C +C P CPVD I Sbjct: 92 ERCIGC--TLCIQACPVDAIVGAPKAMHTVLEDWCTGCDLCVPPCPVDCIDMIPITGERT 149 Query: 62 GLELWLKINSEYAT 75 G + W + ++ A Sbjct: 150 GWDAWSQQQADVAR 163 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 P + + I P+ CI C +C CPVDAI Sbjct: 76 PSNGIEQPRAIAVIDPERCIGCTLCIQACPVDAI 109 >gi|91975813|ref|YP_568472.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisB5] gi|123735639|sp|Q13BG8|NUOI1_RHOPS RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|91682269|gb|ABE38571.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisB5] Length = 171 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAVVCPVGCIDLTKAVADDGRWYPEHFRINFARCIFCGFCEEACPTSAIQ 106 Query: 57 PDTEPGLELW 66 + L W Sbjct: 107 LTPDFELGEW 116 >gi|46204691|ref|ZP_00049610.2| COG1143: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Magnetospirillum magnetotacticum MS-1] Length = 196 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%) Query: 21 CPVDCFYEGENFLAIHP--------DECIDCGVCEPECPVDAIKPDTEP 61 P + + G F H + CI C +CE CP AI + P Sbjct: 35 YPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|307822859|ref|ZP_07653090.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] gi|307736463|gb|EFO07309.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylobacter tundripaludum SV96] Length = 81 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++ E CI C C CP +G++ I+PD C +C C CPVD Sbjct: 1 MALIINEECINCDV--CEPECPNGAISQGDDIYIINPDLCTECIGHHDLPQCMEVCPVDC 58 Query: 55 IKPDTEP 61 I D + Sbjct: 59 IDKDAKH 65 >gi|294636197|ref|ZP_06714614.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] gi|291090498|gb|EFE23059.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] Length = 190 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C C+ CV VCP + E+ + + CI C C CP D G Sbjct: 61 SCQHCEAAPCVAVCPTGASFRDEDGIVQVDQSRCIGCDYCVAACPFHVRYLDPRSG 116 >gi|227114814|ref|ZP_03828470.1| putative anaerobic reductase chain B (DMSO reductase iron-sulfur subunit) [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 208 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +Y ++ C C CV CP + E+ L + + C+ C CE CP A + D Sbjct: 59 SYYLSIACNHCDDPTCVAGCPTGAMHKRKEDGLVLVDENVCVGCRYCEMRCPYGAPQFD 117 >gi|226950711|ref|YP_002805802.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A2 str. Kyoto] gi|226842543|gb|ACO85209.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A2 str. Kyoto] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|261340669|ref|ZP_05968527.1| NADH-quinone oxidoreductase subunit I [Enterobacter cancerogenus ATCC 35316] gi|296103962|ref|YP_003614108.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|288317083|gb|EFC56021.1| NADH-quinone oxidoreductase subunit I [Enterobacter cancerogenus ATCC 35316] gi|295058421|gb|ADF63159.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295098080|emb|CBK87170.1| NADH dehydrogenase subunit I [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAI 55 +E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 SERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 KPDTEPGLELW 66 + + L + Sbjct: 115 QLTPDFELGEY 125 >gi|218558540|ref|YP_002391453.1| 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli S88] gi|218689614|ref|YP_002397826.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli ED1a] gi|218365309|emb|CAR03030.1| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli S88] gi|218427178|emb|CAR08062.2| putative 4Fe-4S ferridoxin-type subunit of oxidoreductase [Escherichia coli ED1a] Length = 222 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 90 QSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 149 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 150 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 185 >gi|168183587|ref|ZP_02618251.1| electron transfer flavoprotein, alpha subunit/FixB family [Clostridium botulinum Bf] gi|237796726|ref|YP_002864278.1| electron transfer flavoprotein subunit alpha/FixB family protein [Clostridium botulinum Ba4 str. 657] gi|182673296|gb|EDT85257.1| electron transfer flavoprotein, alpha subunit/FixB family [Clostridium botulinum Bf] gi|229261514|gb|ACQ52547.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum Ba4 str. 657] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|168179067|ref|ZP_02613731.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum NCTC 2916] gi|182670138|gb|EDT82114.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum NCTC 2916] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|167844880|ref|ZP_02470388.1| ferredoxin [Burkholderia pseudomallei B7210] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCIAMIPV 137 Query: 58 -DTEPGLELWLKINSEYAT 75 G + W + ++ A Sbjct: 138 TGERTGWDAWSQQQADAAR 156 >gi|153938285|ref|YP_001392631.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum F str. Langeland] gi|152934181|gb|ABS39679.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum F str. Langeland] gi|295320617|gb|ADG00995.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum F str. 230613] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|28898701|ref|NP_798306.1| nitrite reductase Fe-S protein NrfC [Vibrio parahaemolyticus RIMD 2210633] gi|153840172|ref|ZP_01992839.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ3810] gi|260363700|ref|ZP_05776484.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus K5030] gi|260879733|ref|ZP_05892088.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AN-5034] gi|260898793|ref|ZP_05907234.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus Peru-466] gi|260901606|ref|ZP_05910001.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ4037] gi|28806919|dbj|BAC60190.1| nitrite reductase, Fe-S protein (NrfC) [Vibrio parahaemolyticus RIMD 2210633] gi|149746172|gb|EDM57292.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ3810] gi|308086597|gb|EFO36292.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus Peru-466] gi|308093420|gb|EFO43115.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AN-5034] gi|308108690|gb|EFO46230.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus AQ4037] gi|308113400|gb|EFO50940.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus K5030] Length = 228 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 E+C C + CV VCP Y E + +H + C+ CG C CP Sbjct: 95 ESCQHCDNPPCVYVCPTGAAYKDESTGIVDVHKERCVGCGYCLAACPYQ 143 >gi|238794600|ref|ZP_04638207.1| NADH-quinone oxidoreductase subunit I [Yersinia intermedia ATCC 29909] gi|238726086|gb|EEQ17633.1| NADH-quinone oxidoreductase subunit I [Yersinia intermedia ATCC 29909] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|114561242|ref|YP_748755.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332535|gb|ABI69917.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella frigidimarina NCIMB 400] Length = 559 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 M + +E C LC CV CP +G + L +C+ CG+CE CP + I Sbjct: 421 MVSINSEKCTLCL--SCVATCPTQALKDGGDAPALKFVEQDCVQCGLCEAACPENVI 475 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 7/72 (9%) Query: 4 VVTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V ++ C KH C+ CP D + + I P C G C CP A+ D Sbjct: 181 VNSDICAHDKHGLNGCNRCLNFCPADAISSVAHKIEIDPYLCHGAGSCTNACPTGALSYD 240 Query: 59 --TEPGLELWLK 68 T L +L+ Sbjct: 241 LPTPASLHTYLE 252 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 18/37 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 ++I+ ++C C C CP A+K + +++ Sbjct: 421 MVSINSEKCTLCLSCVATCPTQALKDGGDAPALKFVE 457 >gi|332999450|gb|EGK19035.1| hydrogenase-4 component A [Shigella flexneri VA-6] Length = 175 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C+ C VCP + F+ + + CI C C CP A++ P Sbjct: 58 CRQCEDAPCANVCPNGAISCDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRP 110 >gi|302039151|ref|YP_003799473.1| 2-ketoisovalerate ferredoxin reductase subunits gamma/delta [Candidatus Nitrospira defluvii] gi|300607215|emb|CBK43548.1| 2-ketoisovalerate ferredoxin reductase, fused gamma and delta subunit [Candidatus Nitrospira defluvii] Length = 305 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + C C C CP ++ I D C C +C ECP A+ + E Sbjct: 241 VADKCNGC--WLCFVYCPDGVISMNTDDRPVIDYDHCKGCQICVHECPTHALVAEREQE 297 >gi|300938216|ref|ZP_07152984.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 21-1] gi|300456806|gb|EFK20299.1| cytochrome c nitrite reductase, Fe-S protein [Escherichia coli MS 21-1] Length = 223 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDRAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|260776502|ref|ZP_05885397.1| NrfC protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607725|gb|EEX33990.1| NrfC protein [Vibrio coralliilyticus ATCC BAA-450] Length = 229 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + + D+C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVDKDKCVGCGYCLAACPYQ 145 >gi|255629169|gb|ACU14929.1| unknown [Glycine max] Length = 222 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CP DAI Sbjct: 121 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPGDAI 177 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 121 ERCIACKLCEAICPAQAITIEAEERED 147 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CP D EG NF Sbjct: 162 CIYCGF--CQEACPGDAIVEGPNF 183 >gi|288869815|ref|ZP_05976441.2| polyferredoxin [Methanobrevibacter smithii DSM 2374] gi|288860364|gb|EFC92662.1| polyferredoxin [Methanobrevibacter smithii DSM 2374] Length = 343 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD 53 CI CK C++ CPV + E + + ++P +CI CG C CPV+ Sbjct: 128 CIRCK--KCMKQCPVGAIHVEDDGKVVVNPFKCISCGECLDVCPVN 171 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 18/69 (26%) Query: 8 NCILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCEPECP 51 CI C C EVCP + + I CI C C +CP Sbjct: 82 ACIRCGF--CAEVCPTEPKTLECGENHLLKPEFNIIPSKRQFIIDDYLCIRCKKCMKQCP 139 Query: 52 VDAIKPDTE 60 V AI + + Sbjct: 140 VGAIHVEDD 148 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 13/61 (21%) Query: 4 VVTENCILCKHTDCVEVCP-----------VDCFYEGENFLAIHPDECIDCGVCEPECPV 52 V+ E CI C C+ CP D EG + I+ CI CG C CP Sbjct: 38 VIKEYCIGCG--ACISSCPSPNAIKLVRDEDDETKEGVTYPIINKSACIRCGFCAEVCPT 95 Query: 53 D 53 + Sbjct: 96 E 96 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +E C C C+ CP E + + + ++C+ C +C CP IK Sbjct: 259 SETCKKC--QMCIPDCPTKAISFDEKNDTIVRNENKCLRCSICYQSCPFSTIKY 310 >gi|229587157|ref|YP_002845658.1| NADH dehydrogenase subunit I [Rickettsia africae ESF-5] gi|259514784|sp|C3PLS5|NUOI_RICAE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|228022207|gb|ACP53915.1| NADH dehydrogenase I chain I [Rickettsia africae ESF-5] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 34.7 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|157829061|ref|YP_001495303.1| NADH dehydrogenase subunit I [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933787|ref|YP_001650576.1| NADH dehydrogenase subunit I [Rickettsia rickettsii str. Iowa] gi|226737414|sp|B0BVB0|NUOI_RICRO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737415|sp|A8GTS0|NUOI_RICRS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|157801542|gb|ABV76795.1| NADH dehydrogenase subunit I [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908874|gb|ABY73170.1| NADH-quinone oxidoreductase chain I [Rickettsia rickettsii str. Iowa] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|91204918|ref|YP_537273.1| NADH dehydrogenase subunit I [Rickettsia bellii RML369-C] gi|157827755|ref|YP_001496819.1| NADH dehydrogenase subunit I [Rickettsia bellii OSU 85-389] gi|110287771|sp|Q1RKD0|NUOI_RICBR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737412|sp|A8GY32|NUOI_RICB8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91068462|gb|ABE04184.1| NADH dehydrogenase I chain I [Rickettsia bellii RML369-C] gi|157803059|gb|ABV79782.1| NADH dehydrogenase subunit I [Rickettsia bellii OSU 85-389] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 34.7 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|15893152|ref|NP_360866.1| NADH dehydrogenase subunit I [Rickettsia conorii str. Malish 7] gi|20139030|sp|Q92G94|NUOI_RICCN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|15620362|gb|AAL03767.1| NADH dehydrogenase I chain I [Rickettsia conorii str. Malish 7] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|89893739|ref|YP_517226.1| hypothetical protein DSY0993 [Desulfitobacterium hafniense Y51] gi|219668114|ref|YP_002458549.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89333187|dbj|BAE82782.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538374|gb|ACL20113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 240 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCE--PECPVDAIKPDT 59 CI C C CP+ Y+ ++I DEC++CG+C +CP A D Sbjct: 8 CIGCGL--CAPYCPMGVLYKDGETMSIDHDECVECGICLNCAKCPKGAFYQDE 58 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I ++CI CG+C P CP+ + D E Sbjct: 3 IDVNKCIGCGLCAPYCPMGVLYKDGE 28 >gi|320105159|ref|YP_004180750.1| NADH dehydrogenase subunit I [Isosphaera pallida ATCC 43644] gi|319752441|gb|ADV64201.1| NADH dehydrogenase subunit I [Isosphaera pallida ATCC 43644] Length = 201 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 16/62 (25%) Query: 9 CILCKHTDCVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C CPV C + I CI CG+CE CPVDA Sbjct: 78 CVAC--MLCATACPVHCIDIVPATAPPSWPDREKYPESFVIDELRCIYCGMCEEACPVDA 135 Query: 55 IK 56 I+ Sbjct: 136 IE 137 >gi|297617703|ref|YP_003702862.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680] gi|297145540|gb|ADI02297.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680] Length = 401 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 VT +C C H C VCP I +C++CG C CP AI+ Sbjct: 26 VTSDCHGCDH--CTSVCPSHAIKGRIGEQHHIDTRKCLNCGQCLISCPFGAIED 77 >gi|254284151|ref|ZP_04959119.1| electron transport complex protein RnfB [gamma proteobacterium NOR51-B] gi|219680354|gb|EED36703.1| electron transport complex protein RnfB [gamma proteobacterium NOR51-B] Length = 200 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 114 AYIREDECIGC--TKCIQACPVDAILGAAKLMHTVIVDECTGCDLCVEPCPVDCI 166 >gi|212636218|ref|YP_002312743.1| anaerobic dimethyl sulfoxide reductase subunit B [Shewanella piezotolerans WP3] gi|212557702|gb|ACJ30156.1| Anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella piezotolerans WP3] Length = 226 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + D CI C C CP DA + D Sbjct: 79 AYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAEDICIGCESCSRACPYDAPQIDR 138 Query: 60 E 60 E Sbjct: 139 E 139 >gi|160893746|ref|ZP_02074530.1| hypothetical protein CLOL250_01300 [Clostridium sp. L2-50] gi|156864731|gb|EDO58162.1| hypothetical protein CLOL250_01300 [Clostridium sp. L2-50] Length = 661 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C C + C CPV E I +CI CG C C A+ + Sbjct: 610 EACKGC--SKCARNCPVGAITGEIRKPFVIDTAKCIKCGACIDNCAFHAVYTE 660 Score = 41.3 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 12/29 (41%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P+ C C C CPV AI + Sbjct: 607 IDPEACKGCSKCARNCPVGAITGEIRKPF 635 >gi|158520457|ref|YP_001528327.1| thiamine pyrophosphate binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509283|gb|ABW66250.1| thiamine pyrophosphate protein domain protein TPP-binding [Desulfococcus oleovorans Hxd3] Length = 620 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 3 YVVTENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + V++ C H DC+ CP FY + + I+P+ C C VC CP AI P Sbjct: 562 FYVSDRCKN--HRDCINTLACP--AFYVADGRVQINPNLCAGCAVCVQVCPEKAIVP 614 >gi|18312131|ref|NP_558798.1| ferredoxin like protein [Pyrobaculum aerophilum str. IM2] gi|18159564|gb|AAL62980.1| ferredoxin like protein [Pyrobaculum aerophilum str. IM2] Length = 96 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C C+ C +CP C+ + +++ + + C++CG C CP +I+ + Sbjct: 32 EKCRKCEKKPCTYMCPAKCYVQQGDYVVLSTEACVECGTCRVVCPHGSIEWNYP 85 >gi|107099346|ref|ZP_01363264.1| hypothetical protein PaerPA_01000358 [Pseudomonas aeruginosa PACS2] gi|254243460|ref|ZP_04936782.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa 2192] gi|126196838|gb|EAZ60901.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa 2192] Length = 83 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDT 59 I D Sbjct: 59 IPLDD 63 >gi|325294634|ref|YP_004281148.1| iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065082|gb|ADY73089.1| iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 64 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 +Y+ CI CK C+EVCP+ F GE + ++P++C C +C CPVDAI Sbjct: 5 SYIDQGLCIGCK--ICIEVCPMGVFVMSGEKAVVMNPEKCNGCEICVENCPVDAI 57 >gi|315618863|gb|EFU99446.1| uncharacterized ferredoxin-like protein ydhX [Escherichia coli 3431] gi|323940662|gb|EGB36853.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] Length = 211 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 79 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 138 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + P A + G + E Sbjct: 139 KCDFCAESRLAKGFPPICV--SACPEHALIFGREDSPE 174 >gi|301310562|ref|ZP_07216501.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|300832136|gb|EFK62767.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 301 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP E + + C CG C CP A++ Sbjct: 52 CIGCG--ACVDVCPTGALTLTEAGIVTNRSLCRTCGRCAEVCPTLAME 97 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C L +CI CG C CP A Sbjct: 26 CPLACVWCHNPEGISPRAEKLYTRK-KCIGCGACVDVCPTGA 66 >gi|254880766|ref|ZP_05253476.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 4_3_47FAA] gi|319639776|ref|ZP_07994506.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 3_1_40A] gi|254833559|gb|EET13868.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 4_3_47FAA] gi|317388593|gb|EFV69442.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 3_1_40A] Length = 302 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C++ CP + +C+ CG C ECP AI+ Sbjct: 53 CLGCG--TCLKACPNGALTLAPEGIITDKQKCVLCGRCAEECPAMAIE 98 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 9/42 (21%) Query: 21 CPVDCF--------YEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C G++ L +C+ CG C CP A Sbjct: 27 CPLSCIWCHNPEGIRNGKDKLY-TAKKCLGCGTCLKACPNGA 67 >gi|225706152|gb|ACO08922.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Osmerus mordax] Length = 210 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 109 ERCIACKLCEAICPAQAITIEAEP 132 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|167036163|ref|YP_001671394.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida GB-1] gi|170719528|ref|YP_001747216.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas putida W619] gi|325273725|ref|ZP_08139925.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas sp. TJI-51] gi|166862651|gb|ABZ01059.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida GB-1] gi|169757531|gb|ACA70847.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pseudomonas putida W619] gi|324101145|gb|EGB98791.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas sp. TJI-51] Length = 83 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IPLDEAHPE 67 >gi|323701335|ref|ZP_08113009.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533594|gb|EGB23459.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 257 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 C C + CV+ CPV + + P+ C CG C CP +I Sbjct: 162 CRQCGNARCVQACPVGALERHPETHAVQLKPEICQGCGACAEACPFGSIHFKD 214 >gi|298246474|ref|ZP_06970280.1| cyclic nucleotide-binding protein [Ktedonobacter racemifer DSM 44963] gi|297553955|gb|EFH87820.1| cyclic nucleotide-binding protein [Ktedonobacter racemifer DSM 44963] Length = 642 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C C+ C+ +C + + CI CG+C CP D I + Sbjct: 494 IATACRQCQDPVCM-LCSRAGIARLPSGEVYITESCIGCGICAERCPYDNISIVDLEEQQ 552 Query: 65 ------LWLKINSEYATQ----WPNITTKKESLPSAAKMDGVKQ 98 LW ++ ++++ P +TT L + +D V++ Sbjct: 553 TQRQGDLWQSFSTFFSSKKRKLLPVLTTP-GPLDNTPPLDPVEE 595 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 16/61 (26%) Query: 7 ENCILCKHTDCVEVCPV---DCFYEGE-NFLAIHP----------DECIDCGVCEPECPV 52 + CI C C+ CPV E N I DEC+ CG C P CPV Sbjct: 37 DMCIGCD--RCMRACPVPLSSKISIAELNKATIDDELSPLLVRFTDECVLCGSCVPVCPV 94 Query: 53 D 53 D Sbjct: 95 D 95 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 12/28 (42%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPEC 50 D EG L I +CI C CE C Sbjct: 446 DDGVIEGTEVLVIDLAKCIHCNECEEAC 473 >gi|291287814|ref|YP_003504630.1| electron transport complex, RnfABCDGE type, B subunit [Denitrovibrio acetiphilus DSM 12809] gi|290884974|gb|ADD68674.1| electron transport complex, RnfABCDGE type, B subunit [Denitrovibrio acetiphilus DSM 12809] Length = 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C + CPV I P CI CG CE CP AI+ Sbjct: 213 CIGC--RMCEKKCPVGAIDVDSFLAVIDPAPCIACGECERVCPTGAIR 258 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK--PDTE 60 V T C+ CV+ C D Y G + + I PD+C CG C CP IK P+ + Sbjct: 133 VCTYACVGEG--SCVKSCAFDAMYMGSDGIPVIIPDKCTSCGKCVAACPRKLIKLIPEDK 190 Query: 61 P 61 P Sbjct: 191 P 191 Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 18/72 (25%) Query: 4 VVTENCILCKHTDCVEVCP--------------VDCFYE--GENFLAIHPDECIDCGVCE 47 ++ + C C CV CP V C + G + CI C +CE Sbjct: 163 IIPDKCTSCG--KCVAACPRKLIKLIPEDKPFVVACMSKDKGPDVKKACKVGCIGCRMCE 220 Query: 48 PECPVDAIKPDT 59 +CPV AI D+ Sbjct: 221 KKCPVGAIDVDS 232 >gi|225572045|ref|ZP_03780909.1| hypothetical protein RUMHYD_00339 [Blautia hydrogenotrophica DSM 10507] gi|225040480|gb|EEG50726.1| hypothetical protein RUMHYD_00339 [Blautia hydrogenotrophica DSM 10507] Length = 623 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++ E C C C + CP I+ D CI CG C+ C DA+ + Sbjct: 568 HINPEFCKGCG--KCAKNCPTGAITGARKHPYTINNDLCIKCGNCKDNCAFDAVYVE 622 Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 12/25 (48%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I+P+ C CG C CP AI Sbjct: 565 RQFHINPEFCKGCGKCAKNCPTGAI 589 >gi|254422749|ref|ZP_05036467.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] gi|196190238|gb|EDX85202.1| 4Fe-4S binding domain protein [Synechococcus sp. PCC 7335] Length = 134 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 8/59 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVD 53 MTY +T+ CI C C+ CP + I+ D C +C C CP + Sbjct: 1 MTYAITDKCISC--QRCIPTCPTNAIERNGATFKINADLCNNCKGFYSVPQCWAVCPTE 57 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIK 56 D+CI C C P CP +AI+ Sbjct: 1 MTYAITDKCISCQRCIPTCPTNAIE 25 >gi|170755508|ref|YP_001782909.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum B1 str. Okra] gi|169120720|gb|ACA44556.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum B1 str. Okra] gi|322807596|emb|CBZ05171.1| electron transfer flavoprotein, alpha subunit [Clostridium botulinum H04402 065] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|168232096|ref|ZP_02657154.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472499|ref|ZP_03078483.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458863|gb|EDX47702.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333575|gb|EDZ20339.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 287 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTRACVRRRFRFSSCRACADVCPAQAFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEP 61 + C +C C CP + +N L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDNTLTIVAARCTGCGGCAAVCPHQALRLRFDVEP 245 >gi|134298016|ref|YP_001111512.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050716|gb|ABO48687.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 1010 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV C+ C CVEVCP G I+P C CG C C AI Sbjct: 934 AYVDKRKCMACGV--CVEVCPAKAATLVTDERGNTVADINPALCKGCGACSSSCRCGAI 990 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 26/90 (28%), Gaps = 29/90 (32%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECID-- 42 Y+ C C C E CPV D F +G N AI +C+ Sbjct: 104 YIDVNKCTGCG--SCAEACPVKVDDAFNQGLNKRKAIYKLYAQAFPNAYAIDSSKCLKFK 161 Query: 43 -------CGVCEPECPVDAIKPDTEPGLEL 65 CG C C AI + Sbjct: 162 NLSNDKLCGKCIKACQAGAINHHMQDEETQ 191 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 I ++C CG C CPV + GL I YA +PN Sbjct: 104 YIDVNKCTGCGSCAEACPVK-VDDAFNQGLNKRKAIYKLYAQAFPN 148 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 15/45 (33%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + +C+ CGVC CP A T+ IN Sbjct: 927 IETDGKAAYVDKRKCMACGVCVEVCPAKAATLVTDERGNTVADIN 971 >gi|323499047|ref|ZP_08104027.1| iron-sulfur cluster-binding protein [Vibrio sinaloensis DSM 21326] gi|323315882|gb|EGA68913.1| iron-sulfur cluster-binding protein [Vibrio sinaloensis DSM 21326] Length = 553 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 10/69 (14%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K D CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCDRCVDACPAGALSSEGNDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KPDTEPGLE 64 E Sbjct: 233 HYALPNPQE 241 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+C CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGASPSLQFIEQDCIQCGLCTKACP 462 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCDRCVDACPAGALSSEGNDKTGHRIEIN 213 >gi|313672151|ref|YP_004050262.1| molybdopterin oxidoreductase 4fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] gi|312938907|gb|ADR18099.1| molybdopterin oxidoreductase 4Fe-4S ferredoxin [Calditerrivibrio nitroreducens DSM 19672] Length = 185 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C C++ C VCP Y+ + + D+CI C C CP DA P Sbjct: 63 CQHCENAPCQSVCPTQATYKTPEGVVLVDYDKCILCKACMTACPYDARFP 112 >gi|297617602|ref|YP_003702761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] gi|297145439|gb|ADI02196.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 287 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C+EVCP + + E P CI C C CP + K Sbjct: 74 CMHCDEPACMEVCPRQAYSKNEWGATVHDPSRCIGCQYCHYACPWNVPKYLKRED 128 >gi|291614821|ref|YP_003524978.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291584933|gb|ADE12591.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 84 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP +G+ I P++C +C C CPVD Sbjct: 1 MSLIITDECINCDV--CEPECPNGAISQGDTIYIIDPNKCTECVGHYDTPQCVEVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P +E ++ ++Y Sbjct: 59 I-PHDPAHVETKEQLQAKY 76 >gi|170760160|ref|YP_001788602.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407149|gb|ACA55560.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A3 str. Loch Maree] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|153813652|ref|ZP_01966320.1| hypothetical protein RUMOBE_04075 [Ruminococcus obeum ATCC 29174] gi|149830268|gb|EDM85361.1| hypothetical protein RUMOBE_04075 [Ruminococcus obeum ATCC 29174] Length = 290 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + CI C C + C + ++ L I ++C CG C CPVDA Sbjct: 167 DTCIHCGV--CEKACREEAISFQDDKLIIDNEKCNYCGRCAKSCPVDA 212 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +C++ D +G ++ D CI CGVCE C +AI + Sbjct: 145 NCLKAEENDVGIKGAAQISWKEDTCIHCGVCEKACREEAISFQDD 189 >gi|126666311|ref|ZP_01737290.1| NADH dehydrogenase subunit I [Marinobacter sp. ELB17] gi|126629112|gb|EAZ99730.1| NADH dehydrogenase subunit I [Marinobacter sp. ELB17] Length = 179 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 57 ERCVACNL--CAVACPVACISLEKGEREDGRWYPEFFRINFSRCIFCGMCEEACPTSAIQ 114 Query: 57 PDTEPGLELW 66 + + + Sbjct: 115 LTPDFEMGEY 124 >gi|170724604|ref|YP_001758630.1| dimethylsulfoxide reductase subunit B [Shewanella woodyi ATCC 51908] gi|169809951|gb|ACA84535.1| dimethylsulfoxide reductase, chain B [Shewanella woodyi ATCC 51908] Length = 225 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP ++ + + + D CI C C CP DA + D+ Sbjct: 78 AYYMSIGCNHCSEPVCVKACPTGAMHKRRQDGLVHVAQDLCIGCESCARACPYDAPQIDS 137 Query: 60 E 60 E Sbjct: 138 E 138 >gi|116695848|ref|YP_841424.1| benzoyl-CoA dioxygenase A [Ralstonia eutropha H16] gi|113530347|emb|CAJ96694.1| Benzoyl-CoA dioxygenase A [Ralstonia eutropha H16] Length = 426 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV + D+C C C CP +I Sbjct: 17 EICIRCN--TCEATCPVGAITHDSRNYVVDADKCNLCMACISPCPTGSI 63 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI D+ Sbjct: 14 IDPEICIRCNTCEATCPVGAITHDSR 39 >gi|110680455|ref|YP_683462.1| NADH dehydrogenase subunit I [Roseobacter denitrificans OCh 114] gi|115502543|sp|Q163R7|NUOI_ROSDO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|109456571|gb|ABG32776.1| NADH-quinone oxidoreductase chain I [Roseobacter denitrificans OCh 114] Length = 164 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP I +CI CG CE CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCEEACPVDAIV 120 Query: 56 -----KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 121 EGPNFEFSTETREELYYDKDRLLA 144 >gi|115523735|ref|YP_780646.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisA53] gi|123321218|sp|Q07QW8|NUOI1_RHOP5 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|115517682|gb|ABJ05666.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisA53] Length = 173 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C I+ CI CG CE CP AI+ Sbjct: 51 ERCVACNL--CAVACPVGCIDLAKAVAEDGRWYPEHFRINFARCIFCGYCEEACPTAAIQ 108 Query: 57 PDTEPGLELW 66 + L W Sbjct: 109 LTPDFELSEW 118 >gi|289548469|ref|YP_003473457.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermocrinis albus DSM 14484] gi|289182086|gb|ADC89330.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermocrinis albus DSM 14484] Length = 183 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 NC C+ CV CP + ++ + + CI C C CP AI Sbjct: 59 NCFHCEVAPCVLACPTSAMRKRQDGIVYLEETRCIGCKACIIACPYGAI 107 >gi|257095540|ref|YP_003169181.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048064|gb|ACV37252.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 86 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 11/77 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP + ++G I P +C +C C CPVD Sbjct: 1 MSLIITDECINCDV--CEPECPNEAIFQGAEIYEIDPSKCTECVGHYDTPQCVEVCPVDC 58 Query: 55 IKPD---TEPGLELWLK 68 I D E +LW+K Sbjct: 59 IPKDPAHEESEDQLWVK 75 >gi|189485593|ref|YP_001956534.1| hypothetical protein TGRD_590 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287552|dbj|BAG14073.1| conserved hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 378 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C C CP + N I ++CI C C CP A+K ++++ Sbjct: 318 CVKC--MLCARACPAEAIRAAGNQYPHIDAEKCISCFCCHEMCPHKAVKFKKSMLAKIFI 375 Query: 68 KIN 70 K N Sbjct: 376 KEN 378 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 I+ C+ C +C CP +AI+ + I++E Sbjct: 313 INEKICVKCMLCARACPAEAIR----AAGNQYPHIDAE 346 >gi|163794803|ref|ZP_02188773.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] gi|159180076|gb|EDP64601.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [alpha proteobacterium BAL199] Length = 676 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELW 66 T C+++CP + +++ P C CG+C CP AI PD + + Sbjct: 282 RKTGCTRCLDLCPASAIAPAGDVVSVDPALCGGCGLCAGTCPTSAITYAYPDVQSVHQRI 341 Query: 67 LKINSEY 73 + + S Y Sbjct: 342 MALASAY 348 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 V TE C LC CV CP + + L D C+ CG+C CP I + Sbjct: 517 VDTEGCTLCL--ACVSACPASALQDNPDKPQLLFQEDACVQCGLCAATCPEKVITLE 571 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 16/36 (44%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + + + C C C CP A++ + + L+ + Sbjct: 515 VVVDTEGCTLCLACVSACPASALQDNPDKPQLLFQE 550 >gi|311247108|ref|XP_003122483.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 2 [Sus scrofa] gi|311247128|ref|XP_003122489.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like isoform 2 [Sus scrofa] Length = 212 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 111 ERCIACKLCEAVCPAQAITIEAEPRAD 137 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 152 CIYCGF--CQEACPVDAIVEGPNF 173 >gi|299531030|ref|ZP_07044443.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni S44] gi|298720987|gb|EFI61931.1| electron transport complex, RnfABCDGE type, B subunit [Comamonas testosteroni S44] Length = 220 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK----PDTEPGL 63 CI C T C++ CP D ++ + C C +C P CPVD I+ G Sbjct: 90 CIGC--TLCIKACPTDAILGANKRMHSVIAEHCTGCELCIPVCPVDCIELVNASAEATGW 147 Query: 64 ELWLKINSEYATQ 76 W +E+A Sbjct: 148 SAWSAAQAEHARH 160 Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 22/83 (26%), Gaps = 36/83 (43%) Query: 9 CILCKHTDC-------------VEVCPVDC----------------------FYEGENFL 33 C C + DC + CP E L Sbjct: 23 CTRCGYPDCASYAKAIASGEAAINQCPPGGQEGVRRLASITDRPELPLNAANGIETPRTL 82 Query: 34 A-IHPDECIDCGVCEPECPVDAI 55 A I CI C +C CP DAI Sbjct: 83 ALIDEAWCIGCTLCIKACPTDAI 105 >gi|67459652|ref|YP_247276.1| NADH dehydrogenase subunit I [Rickettsia felis URRWXCal2] gi|75535952|sp|Q4UK24|NUOI_RICFE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|67005185|gb|AAY62111.1| NADH dehydrogenase I chain I [Rickettsia felis URRWXCal2] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERDD 84 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|22125532|ref|NP_668955.1| NADH dehydrogenase subunit I [Yersinia pestis KIM 10] gi|45442148|ref|NP_993687.1| NADH dehydrogenase subunit I [Yersinia pestis biovar Microtus str. 91001] gi|51596899|ref|YP_071090.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis IP 32953] gi|108808035|ref|YP_651951.1| NADH dehydrogenase subunit I [Yersinia pestis Antiqua] gi|108812305|ref|YP_648072.1| NADH dehydrogenase subunit I [Yersinia pestis Nepal516] gi|145599238|ref|YP_001163314.1| NADH dehydrogenase subunit I [Yersinia pestis Pestoides F] gi|149365546|ref|ZP_01887581.1| NADH Dehydrogenase I chain I [Yersinia pestis CA88-4125] gi|153950602|ref|YP_001400439.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis IP 31758] gi|162421132|ref|YP_001606298.1| NADH dehydrogenase subunit I [Yersinia pestis Angola] gi|165925636|ref|ZP_02221468.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165937677|ref|ZP_02226239.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166008508|ref|ZP_02229406.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213832|ref|ZP_02239867.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399268|ref|ZP_02304792.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422344|ref|ZP_02314097.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424548|ref|ZP_02316301.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470944|ref|ZP_02335648.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis FV-1] gi|170023808|ref|YP_001720313.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis YPIII] gi|186895980|ref|YP_001873092.1| NADH dehydrogenase subunit I [Yersinia pseudotuberculosis PB1/+] gi|218929634|ref|YP_002347509.1| NADH dehydrogenase subunit I [Yersinia pestis CO92] gi|229838090|ref|ZP_04458249.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895289|ref|ZP_04510463.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Pestoides A] gi|229898650|ref|ZP_04513795.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. India 195] gi|229902649|ref|ZP_04517766.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Nepal516] gi|270490170|ref|ZP_06207244.1| NADH-quinone oxidoreductase, chain I [Yersinia pestis KIM D27] gi|294504362|ref|YP_003568424.1| NADH dehydrogenase subunit I [Yersinia pestis Z176003] gi|81639048|sp|Q669A7|NUOI_YERPS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123072748|sp|Q1C6B6|NUOI_YERPA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123073347|sp|Q1CHQ8|NUOI_YERPN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123777027|sp|Q7CJ89|NUOI_YERPE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633544|sp|A4TM29|NUOI_YERPP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772597|sp|A7FGR1|NUOI_YERP3 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772598|sp|B2K814|NUOI_YERPB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772599|sp|A9R6L4|NUOI_YERPG RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772600|sp|B1JGM0|NUOI_YERPY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|21958432|gb|AAM85206.1|AE013767_3 NADH dehydrogenase I chain I [Yersinia pestis KIM 10] gi|45437012|gb|AAS62564.1| NADH Dehydrogenase I chain I [Yersinia pestis biovar Microtus str. 91001] gi|51590181|emb|CAH21818.1| NADH dehydrogenase I chain I [Yersinia pseudotuberculosis IP 32953] gi|108775953|gb|ABG18472.1| NADH Dehydrogenase I chain I [Yersinia pestis Nepal516] gi|108779948|gb|ABG14006.1| NADH Dehydrogenase I chain I [Yersinia pestis Antiqua] gi|115348245|emb|CAL21173.1| NADH Dehydrogenase I chain I [Yersinia pestis CO92] gi|145210934|gb|ABP40341.1| NADH Dehydrogenase I chain I [Yersinia pestis Pestoides F] gi|149291959|gb|EDM42033.1| NADH Dehydrogenase I chain I [Yersinia pestis CA88-4125] gi|152962097|gb|ABS49558.1| NADH-quinone oxidoreductase, I subunit [Yersinia pseudotuberculosis IP 31758] gi|162353947|gb|ABX87895.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis Angola] gi|165914427|gb|EDR33042.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922745|gb|EDR39896.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165992890|gb|EDR45191.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205006|gb|EDR49486.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166958850|gb|EDR55871.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051772|gb|EDR63180.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056430|gb|EDR66199.1| NADH-quinone oxidoreductase, I subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750342|gb|ACA67860.1| NADH-quinone oxidoreductase, chain I [Yersinia pseudotuberculosis YPIII] gi|186699006|gb|ACC89635.1| NADH-quinone oxidoreductase, chain I [Yersinia pseudotuberculosis PB1/+] gi|229680096|gb|EEO76195.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Nepal516] gi|229688198|gb|EEO80269.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. India 195] gi|229694456|gb|EEO84503.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701775|gb|EEO89800.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis Pestoides A] gi|262362649|gb|ACY59370.1| NADH dehydrogenase subunit I [Yersinia pestis D106004] gi|262366278|gb|ACY62835.1| NADH dehydrogenase subunit I [Yersinia pestis D182038] gi|270338674|gb|EFA49451.1| NADH-quinone oxidoreductase, chain I [Yersinia pestis KIM D27] gi|294354821|gb|ADE65162.1| NADH dehydrogenase subunit I [Yersinia pestis Z176003] gi|320014614|gb|ADV98185.1| NADH:ubiquinone oxidoreductase, chain I [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|284161205|ref|YP_003399828.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|284011202|gb|ADB57155.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 134 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 C C+ CV+VCP + + I+ D CI C C C + AI Sbjct: 54 CRGCEDPPCVQVCPTGALRKRKGGGVIYKEDLCIGCKNCVQACTIGAIFE 103 Score = 37.1 bits (85), Expect = 0.86, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 + CI CK +CV+ C + +E + C+ CG C CP Sbjct: 84 DLCIGCK--NCVQACTIGAIFERRDGKI---AVCVHCGYCVNFCP 123 >gi|148381229|ref|YP_001255770.1| electron transfer flavoprotein alpha-subunit [Clostridium botulinum A str. ATCC 3502] gi|153933291|ref|YP_001385604.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A str. ATCC 19397] gi|153936895|ref|YP_001389010.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A str. Hall] gi|148290713|emb|CAL84844.1| electron transfer flavoprotein alpha-subunit [Clostridium botulinum A str. ATCC 3502] gi|152929335|gb|ABS34835.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A str. ATCC 19397] gi|152932809|gb|ABS38308.1| electron transfer flavoprotein, alpha subunit/FixB family protein [Clostridium botulinum A str. Hall] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVVNGLAEVN-EKCTICGACVEACPFDAI 53 >gi|94969971|ref|YP_592019.1| 4Fe-4S ferredoxin, iron-sulfur binding [Candidatus Koribacter versatilis Ellin345] gi|94552021|gb|ABF41945.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Candidatus Koribacter versatilis Ellin345] Length = 255 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C CPV + D+CI C C CP + + Sbjct: 58 CMHCQDPTCASACPVGALQKNSFGPVTYDADKCIGCRYCMVACPYSVPRYE 108 >gi|238788647|ref|ZP_04632439.1| NADH-quinone oxidoreductase subunit I [Yersinia frederiksenii ATCC 33641] gi|238723242|gb|EEQ14890.1| NADH-quinone oxidoreductase subunit I [Yersinia frederiksenii ATCC 33641] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|295109804|emb|CBL23757.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Ruminococcus obeum A2-162] Length = 287 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + CI C C + C + + L I +C CG C CPVDA Sbjct: 164 DTCIHCGV--CEKACREEAITFRDGKLVIDTQKCNYCGRCAKSCPVDA 209 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C++ D +G ++ D CI CGVCE C +AI Sbjct: 142 NCLKAEENDVGIKGAAQISWKEDTCIHCGVCEKACREEAI 181 >gi|260462240|ref|ZP_05810484.1| NADH-quinone oxidoreductase, chain I [Mesorhizobium opportunistum WSM2075] gi|259032100|gb|EEW33367.1| NADH-quinone oxidoreductase, chain I [Mesorhizobium opportunistum WSM2075] Length = 163 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 119 VEGPNFEFATETREELYYDKDRLLA 143 >gi|239946812|ref|ZP_04698565.1| NADH-quinone oxidoreductase subunit I [Rickettsia endosymbiont of Ixodes scapularis] gi|239921088|gb|EER21112.1| NADH-quinone oxidoreductase subunit I [Rickettsia endosymbiont of Ixodes scapularis] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERDD 84 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|187776798|ref|ZP_02993271.1| hypothetical protein CLOSPO_00314 [Clostridium sporogenes ATCC 15579] gi|187775457|gb|EDU39259.1| hypothetical protein CLOSPO_00314 [Clostridium sporogenes ATCC 15579] Length = 398 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C + CP D + ++ ++C CG C CP DAI Sbjct: 5 IIKEKCKACG--ICEKQCPFDAIHVINGLAEVN-EKCTICGACVEACPFDAI 53 >gi|162148803|ref|YP_001603264.1| NADH dehydrogenase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|209545449|ref|YP_002277678.1| NADH dehydrogenase subunit I [Gluconacetobacter diazotrophicus PAl 5] gi|161787380|emb|CAP56975.1| NADH-quinone oxidoreductase chain I [Gluconacetobacter diazotrophicus PAl 5] gi|209533126|gb|ACI53063.1| NADH-quinone oxidoreductase, chain I [Gluconacetobacter diazotrophicus PAl 5] Length = 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C CP + I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEATCPAEAITIESEPRDDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 117 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 17/27 (62%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP +AI ++EP + Sbjct: 61 ERCIACKLCEATCPAEAITIESEPRDD 87 >gi|157962175|ref|YP_001502209.1| electron transport complex protein RnfB [Shewanella pealeana ATCC 700345] gi|189043389|sp|A8H537|RNFB_SHEPA RecName: Full=Electron transport complex protein rnfB gi|157847175|gb|ABV87674.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella pealeana ATCC 700345] Length = 189 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|218767189|ref|YP_002341701.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|121051197|emb|CAM07468.1| putative ferredoxin [Neisseria meningitidis Z2491] gi|319411394|emb|CBY91805.1| putative ferredoxin [Neisseria meningitidis WUE 2594] gi|325129159|gb|EGC52007.1| iron-sulfur cluster-binding protein [Neisseria meningitidis N1568] Length = 83 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTE 60 I D E Sbjct: 59 ILIDEE 64 >gi|332702093|ref|ZP_08422181.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552242|gb|EGJ49286.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 370 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +NC C CVEVC E+ +++ D C CG C C ++ D + Sbjct: 194 DNCKGCG--ICVEVCAPGALRMDEDKRISVDKDLCAGCGACFHACAHHGVEIDWNTDINE 251 Query: 66 WLKINSEYATQWPNITTKKESL 87 +L EYA +T K +L Sbjct: 252 FLGRMMEYAAAT-LLTRAKPTL 272 Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 +HPD C CG+C C A++ D + Sbjct: 191 VHPDNCKGCGICVEVCAPGALRMDED 216 >gi|325528986|gb|EGD06007.1| ferredoxin [Burkholderia sp. TJI49] Length = 167 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C P CPVD I Sbjct: 80 AFIDESLCIGC--TLCMQACPVDAIVGAPKQMHTIVESLCTGCDLCVPPCPVDCIAMVPV 137 Query: 58 -DTEPGLELWLKINSEYATQ 76 G + W + ++ A + Sbjct: 138 TGERTGWDAWTQEQADAARE 157 >gi|312880839|ref|ZP_07740639.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] gi|310784130|gb|EFQ24528.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Aminomonas paucivorans DSM 12260] Length = 57 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C+ C+ CV VCP + ++ D C++CG C CPV AI Sbjct: 4 AVVDKDTCVGCE--ACVGVCPTSAISMEDGKAQVNADTCVECGACVATCPVSAI 55 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 11/30 (36%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + D C+ C C CP AI + Sbjct: 5 VVDKDTCVGCEACVGVCPTSAISMEDGKAQ 34 >gi|303246395|ref|ZP_07332674.1| nitroreductase [Desulfovibrio fructosovorans JJ] gi|302492105|gb|EFL51980.1| nitroreductase [Desulfovibrio fructosovorans JJ] Length = 301 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C VCP ++ + CI CG C CP +A+ Sbjct: 10 AEACLGCG--ACAAVCPSGVLGFDGRKASVVAEGCIGCGHCAALCPAEAV 57 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 11/24 (45%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I + C+ CG C CP + D Sbjct: 8 IDAEACLGCGACAAVCPSGVLGFD 31 >gi|294677721|ref|YP_003578336.1| [pyruvate formate-lyase]-activating enzyme [Rhodobacter capsulatus SB 1003] gi|294476541|gb|ADE85929.1| [pyruvate formate-lyase]-activating enzyme-1 [Rhodobacter capsulatus SB 1003] Length = 305 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C+ VCPV +CI CG C CP +A+K Sbjct: 58 ASACIGCG--KCIPVCPVGALSRDNPGFV-DRAKCIRCGDCTKVCPTEALK 105 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 7/47 (14%) Query: 21 CPVDC-FYEGENFLAIHPD------ECIDCGVCEPECPVDAIKPDTE 60 CP+ C + + PD CI CG C P CPV A+ D Sbjct: 35 CPLACRWCSNPESQSTEPDLFFRASACIGCGKCIPVCPVGALSRDNP 81 >gi|213579914|ref|ZP_03361740.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 259 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|126699794|ref|YP_001088691.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile 630] gi|115251231|emb|CAJ69062.1| putative oxidoreductase, Fe-S subunit [Clostridium difficile] Length = 140 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C C+ VCP +CF + E F+ + CI C +CE C A Sbjct: 54 ACIHCNEPKCLGVCPKNCFKKEEGFIVLDNQNCIGCKLCEKACEYGA 100 >gi|94499818|ref|ZP_01306354.1| Ferredoxin [Oceanobacter sp. RED65] gi|94428019|gb|EAT12993.1| Ferredoxin [Oceanobacter sp. RED65] Length = 81 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + EGE I P++C +C C+ CPVD Sbjct: 1 MALMITDDCINCDV--CEPECPNEAISEGEEIYEIDPNKCTECVGHYDEPQCQLVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D E Sbjct: 59 IPLDPENEETH 69 >gi|326388440|ref|ZP_08210036.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207172|gb|EGD57993.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 470 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCP-VDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C C+ CP D I P CI G C CP DAI Sbjct: 89 CIGCG--ACIRACPETDALGLIGRTAVLIEPWACIGHGTCRDACPTDAI 135 Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 9/17 (52%) Query: 35 IHPDECIDCGVCEPECP 51 I P CI CG C CP Sbjct: 84 IDPARCIGCGACIRACP 100 >gi|325267328|ref|ZP_08133990.1| NADH-quinone oxidoreductase subunit I [Kingella denitrificans ATCC 33394] gi|324981265|gb|EGC16915.1| NADH-quinone oxidoreductase subunit I [Kingella denitrificans ATCC 33394] Length = 195 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 94 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTTRYDIDLTKCIFCGFCEEACPTDAI 150 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 94 ERCIACKLCEAVCPAMAINIESEERED 120 >gi|307546575|ref|YP_003899054.1| ferredoxin [Halomonas elongata DSM 2581] gi|307218599|emb|CBV43869.1| ferredoxin [Halomonas elongata DSM 2581] Length = 82 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D GE I P+ C +C C+ CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNDAISPGEEIYIIDPNRCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P E ++ +Y Sbjct: 59 I-PLDPERQESRDELMEKY 76 >gi|302387715|ref|YP_003823537.1| Fe-S cluster domain protein [Clostridium saccharolyticum WM1] gi|302198343|gb|ADL05914.1| Fe-S cluster domain protein [Clostridium saccharolyticum WM1] Length = 470 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C+ C +C++ CP I+ CIDCG C CP A Sbjct: 13 ELCMGC--INCIKRCPTQAIRVRNGKAQINSKFCIDCGECIRVCPHHA 58 >gi|291614848|ref|YP_003525005.1| electron transport complex, RnfABCDGE type, B subunit [Sideroxydans lithotrophicus ES-1] gi|291584960|gb|ADE12618.1| electron transport complex, RnfABCDGE type, B subunit [Sideroxydans lithotrophicus ES-1] Length = 184 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I EC C +C CPVD I Sbjct: 105 AFIDEQTCIGC--TLCLQACPVDAIVGAAKQMHTIIASECTGCELCIAPCPVDCI 157 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 14/27 (51%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G+ I CI C +C CPVDAI Sbjct: 101 GKAVAFIDEQTCIGCTLCLQACPVDAI 127 >gi|238650815|ref|YP_002916670.1| NADH dehydrogenase subunit I [Rickettsia peacockii str. Rustic] gi|259514787|sp|C4K221|NUOI_RICPU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|238624913|gb|ACR47619.1| NADH dehydrogenase subunit I [Rickettsia peacockii str. Rustic] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 58 ERCIACKLCEAICPAQAIVIEADERED 84 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|207727832|ref|YP_002256226.1| ferredoxin protein [Ralstonia solanacearum MolK2] gi|206591073|emb|CAQ56685.1| ferredoxin protein [Ralstonia solanacearum MolK2] Length = 82 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDAPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|153941079|ref|YP_001391521.1| iron-sulfur binding protein [Clostridium botulinum F str. Langeland] gi|152936975|gb|ABS42473.1| iron-sulfur binding protein [Clostridium botulinum F str. Langeland] Length = 288 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + CI C T+C VC D L I P C CG C CP +AIK + E + + Sbjct: 65 DICIKC--TECELVCKFDAIKN----LKIDPFLCEWCGACTLICPQNAIKLEDEKTAKTF 118 Query: 67 L 67 + Sbjct: 119 I 119 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIK 56 G +I D CI C CE C DAIK Sbjct: 56 GGKKASIDEDICIKCTECELVCKFDAIK 83 >gi|149920708|ref|ZP_01909173.1| putative carbamoyl transferase [Plesiocystis pacifica SIR-1] gi|149818495|gb|EDM77944.1| putative carbamoyl transferase [Plesiocystis pacifica SIR-1] Length = 1178 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKP 57 V E C C C +CPVD F +G + + PD CI C VC CP DA++P Sbjct: 250 VDPERCDGCGV--CERLCPVD-FLDGLGQPRAGLEPDACIRCQVCVEACPTDAMRP 302 >gi|295094633|emb|CBK83724.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Coprococcus sp. ART55/1] Length = 286 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +CI+C CV+ C + + + D+C CG C CP DA Sbjct: 164 SCIMCGV--CVKACREGAITMADGKIILDTDKCNYCGRCAKACPTDA 208 >gi|291514556|emb|CBK63766.1| hypothetical protein AL1_12970 [Alistipes shahii WAL 8301] Length = 281 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 3/49 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C C +CP G+ P CI C C CPV A Sbjct: 211 ADRCTHCG--RCAAICPTQAIARGDE-AHTDPARCIRCCACVKGCPVGA 256 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 10/26 (38%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEP 61 D C CG C CP AI E Sbjct: 210 DADRCTHCGRCAAICPTQAIARGDEA 235 >gi|288559375|ref|YP_003422861.1| CoB--CoM heterodisulfide reductase subunit A HdrA [Methanobrevibacter ruminantium M1] gi|288542085|gb|ADC45969.1| CoB--CoM heterodisulfide reductase subunit A HdrA [Methanobrevibacter ruminantium M1] Length = 660 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY---EGENFL---------------AIHPDECIDCG 44 YV ++C C C EVCP++ EG + I + CIDCG Sbjct: 246 YVKEDDCTGCGQ--CQEVCPIEIPNYYDEGVGMVKAAYIPFPQAVPLCATIDKNYCIDCG 303 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C DAI D EP Sbjct: 304 LCETVCGPDAIDRDMEPEE 322 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 6 TENCILCKHTDCVEVCPVDCF-YEGE---NFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 T C C+ CVE+CP EGE AI+ C CG C CP A+ + Sbjct: 586 TTVCGACEV--CVELCPFGAVSIEGEGADKHAAINVALCKGCGTCVGACPSGAMNQNHFK 643 Query: 62 GLELWLKINSEY 73 ++ +I + Sbjct: 644 TEQIMAQIAAAL 655 >gi|239815128|ref|YP_002944038.1| electron transport complex, RnfABCDGE type, subunit beta [Variovorax paradoxus S110] gi|239801705|gb|ACS18772.1| electron transport complex, RnfABCDGE type, B subunit [Variovorax paradoxus S110] Length = 214 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 9/80 (11%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M V+ E CI C T C++ CP D + + C C +C P CPVD I + Sbjct: 76 MA-VIDEAWCIGC--TLCLDACPTDAIVGINKRMHTVIEAHCTGCELCIPVCPVDCISLE 132 Query: 59 TE----PGLELWLKINSEYA 74 E G + W + +E A Sbjct: 133 VETPGRSGWQAWSQAQAEAA 152 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 26 FYEGEN-FLAIHPDECIDCGVCEPECPVDAI 55 EG I CI C +C CP DAI Sbjct: 69 GTEGPRAMAVIDEAWCIGCTLCLDACPTDAI 99 >gi|134298021|ref|YP_001111517.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134050721|gb|ABO48692.1| tungsten-dependent benzoyl-CoA reductase-related protein bamE [Desulfotomaculum reducens MI-1] Length = 1010 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV C+ C CVEVCP G I+P C CG C C AI Sbjct: 934 AYVDKRKCMACGV--CVEVCPAKAATLVTDERGNTAADINPALCKGCGACSSSCRCGAI 990 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 26/90 (28%), Gaps = 29/90 (32%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECID-- 42 Y+ C C C E CPV D F +G N AI +C+ Sbjct: 104 YIDVNKCTGCG--SCAEACPVKVDDAFNQGLNKRKAIYKLYAQAFPNAYAIDSSKCLKFK 161 Query: 43 -------CGVCEPECPVDAIKPDTEPGLEL 65 CG C C AI + Sbjct: 162 NLSNDKLCGKCIKACQAGAINHHMQDEETQ 191 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPN 79 I ++C CG C CPV + GL I YA +PN Sbjct: 104 YIDVNKCTGCGSCAEACPVK-VDDAFNQGLNKRKAIYKLYAQAFPN 148 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 15/45 (33%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + +C+ CGVC CP A T+ IN Sbjct: 927 IETDGKAAYVDKRKCMACGVCVEVCPAKAATLVTDERGNTAADIN 971 >gi|46580807|ref|YP_011615.1| heterodisulfide reductase subunit A [Desulfovibrio vulgaris str. Hildenborough] gi|120601876|ref|YP_966276.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio vulgaris DP4] gi|46450227|gb|AAS96875.1| heterodisulfide reductase, A subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120562105|gb|ABM27849.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfovibrio vulgaris DP4] gi|311234513|gb|ADP87367.1| FAD dependent oxidoreductase [Desulfovibrio vulgaris RCH1] Length = 652 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C C+ CP GE + C CG+C CP AI+ + Sbjct: 584 CIGCG--KCITTCPYGAIEWMELRGETKARVIETVCQGCGICTVTCPQGAIQLQHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYE---------------GENFLAIHPDECID 42 TYV + C C C+E CP D F E I P C Sbjct: 235 TYVDWDLCTGCGL--CMEKCPSRKSPDAFNEHVGVTTAINIPFPQAIPKKAIIDPTACRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AI+ D E Sbjct: 293 FVKGKCGVCAKMCPTGAIRYDMEDE 317 >gi|327399634|ref|YP_004340503.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Hippea maritima DSM 10411] gi|327182263|gb|AEA34444.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Hippea maritima DSM 10411] Length = 146 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 C C C+E C + E + +PD C+ C +C CP IK DT Sbjct: 59 CRHCDDAPCMEACQNGSMHRDERGYVVVNPDTCVGCWMCVMACPYGVIKTDTR 111 >gi|322807875|emb|CBZ05450.1| periplasmic [Fe] hydrogenase [Clostridium botulinum H04402 065] Length = 449 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I ++C DCG C CP +I Sbjct: 81 DCSMDCKKEGGKTFCQNSCPFDAILINKKTNSTYIDTEKCTDCGFCVEACPTGSI 135 Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE 28 TY+ TE C C CVE CP + Sbjct: 113 TYIDTEKCTDCGF--CVEACPTGSILD 137 >gi|308050140|ref|YP_003913706.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] gi|307632330|gb|ADN76632.1| dimethylsulfoxide reductase, chain B [Ferrimonas balearica DSM 9799] Length = 211 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 Y ++ C C CVE+CP + ++ + + ++CI C +C CP DA + D Sbjct: 63 AYYMSIGCNHCSKPPCVEICPTGAMHKRAKDGIVRVDTEQCIGCEMCAEMCPYDAPQYD 121 >gi|257065446|ref|YP_003145118.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256793099|gb|ACV23769.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 205 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDA 54 C C + C VCP Y E + I D+CI C +C CP +A Sbjct: 64 ACQHCTNAACKRVCPTGATYRDEMGRIEIDYDKCIGCRMCMAACPFNA 111 >gi|255101316|ref|ZP_05330293.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-63q42] gi|255307192|ref|ZP_05351363.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile ATCC 43255] Length = 140 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C C+ VCP +CF + E F+ + CI C +CE C A Sbjct: 54 ACIHCNEPKCLGVCPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGA 100 >gi|148381490|ref|YP_001256031.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|153933063|ref|YP_001385865.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|153936232|ref|YP_001389272.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] gi|148290974|emb|CAL85110.1| iron-only hydrogenase [Clostridium botulinum A str. ATCC 3502] gi|152929107|gb|ABS34607.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397] gi|152932146|gb|ABS37645.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall] Length = 449 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I ++C DCG C CP +I Sbjct: 81 DCSMDCKKEGGKTFCQNSCPFDAILINKKTNSTYIDTEKCTDCGFCVEACPTGSI 135 Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE 28 TY+ TE C C CVE CP + Sbjct: 113 TYIDTEKCTDCGF--CVEACPTGSILD 137 >gi|160875340|ref|YP_001554656.1| dimethylsulfoxide reductase, chain B [Shewanella baltica OS195] gi|160860862|gb|ABX49396.1| dimethylsulfoxide reductase, chain B [Shewanella baltica OS195] gi|315267535|gb|ADT94388.1| dimethylsulfoxide reductase, chain B [Shewanella baltica OS678] Length = 225 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDE-CIDCGVCEPECPVDAIKPDT 59 Y + +C C CV+ CP + E+ L + + CI C C CP DA + D Sbjct: 78 AYYTSISCNHCSEPVCVKACPTGAMHKRKEDGLVLVEESLCIGCQSCSRACPYDAPQIDR 137 Query: 60 E 60 + Sbjct: 138 D 138 >gi|15898855|ref|NP_343460.1| indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Sulfolobus solfataricus P2] gi|284174241|ref|ZP_06388210.1| indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Sulfolobus solfataricus 98/2] gi|13815352|gb|AAK42250.1| Indolepyruvate ferredoxin oxidoreductase alpha subunit (iorA) [Sulfolobus solfataricus P2] gi|261603266|gb|ACX92869.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Sulfolobus solfataricus 98/2] Length = 612 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 4/64 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGL- 63 E C C CP + I CI CG C P CP AI K D Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRNDKKAEIDNYTCIGCGACVPICPFKAISLKGDKPEKWD 607 Query: 64 ELWL 67 ELWL Sbjct: 608 ELWL 611 >gi|16761442|ref|NP_457059.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140861|ref|NP_804203.1| polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213026884|ref|ZP_03341331.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213163416|ref|ZP_03349126.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213649659|ref|ZP_03379712.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857323|ref|ZP_03384294.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25512770|pir||AF0822 probable polyferredoxin STY2772 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503742|emb|CAD02730.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi] gi|29136486|gb|AAO68052.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 287 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|326402523|ref|YP_004282604.1| polysulfide reductase chain B [Acidiphilium multivorum AIU301] gi|325049384|dbj|BAJ79722.1| polysulfide reductase chain B [Acidiphilium multivorum AIU301] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +E C C H CV+ CP ++ G N + + C C C CP D Sbjct: 55 SERCNHCSHATCVDACPTGASQYWNGSNIVVVDATRCTGCKACIAACPYD 104 >gi|312144150|ref|YP_003995596.1| hypothetical protein Halsa_1824 [Halanaerobium sp. 'sapolanicus'] gi|311904801|gb|ADQ15242.1| hypothetical protein Halsa_1824 [Halanaerobium sp. 'sapolanicus'] Length = 380 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +NC+ C +C CP +NF + D CI C C+ CP DA++ L+ Sbjct: 320 DNCVGCG--NCAANCPPKVITMVDNFPEVELDGCIRCFCCQELCPYDAVEIKYPLLARLF 377 Query: 67 LK 68 Sbjct: 378 FA 379 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 5/34 (14%) Query: 34 AIHPDECIDCGVCEPECPVDAI-----KPDTEPG 62 D C+ CG C CP I P+ E Sbjct: 316 VFKKDNCVGCGNCAANCPPKVITMVDNFPEVELD 349 >gi|264678475|ref|YP_003278382.1| electron transport complex, RnfABCDGE type, B [Comamonas testosteroni CNB-2] gi|262208988|gb|ACY33086.1| electron transport complex, RnfABCDGE type, B [Comamonas testosteroni CNB-2] Length = 220 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 21/101 (20%) Query: 9 CILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK----PDTEPGL 63 CI C T C++ CP D ++ + C C +C P CPVD I+ G Sbjct: 90 CIGC--TLCIKACPTDAILGANKRMHSVSAEHCTGCELCIPVCPVDCIELVNASAEATGW 147 Query: 64 ELWLKINSEYATQW--------------PNITTKKESLPSA 90 W +E+A P TT + A Sbjct: 148 SAWSAAQAEHARHRYGVHLQRTGRKANAPVRTTAQPPAAEA 188 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 22/83 (26%), Gaps = 36/83 (43%) Query: 9 CILCKHTDC-------------VEVCPVDC----------------------FYEGENFL 33 C C + DC + CP E L Sbjct: 23 CTRCGYPDCASYAKAIASGEAAINQCPPGGQEGVRRLASITGRPELPLNAANGIETPRTL 82 Query: 34 A-IHPDECIDCGVCEPECPVDAI 55 A I CI C +C CP DAI Sbjct: 83 ALIDEAWCIGCTLCIKACPTDAI 105 >gi|240102116|ref|YP_002958424.1| formate hydrogenlyase II subunit G (Mhy2G) [Thermococcus gammatolerans EJ3] gi|239909669|gb|ACS32560.1| formate hydrogenlyase II subunit G (Mhy2G) [Thermococcus gammatolerans EJ3] Length = 165 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 8/61 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE------GENFLAIHPDECIDCGVCEPECPVDAI 55 ++ CI C CV CP D G + + CI C C+ CP AI Sbjct: 22 PHINPRLCIGCG--ACVNACPADALLRIDDYEKGTRKIVLDVGRCIRCARCDEACPTGAI 79 Query: 56 K 56 + Sbjct: 80 R 80 >gi|237710174|ref|ZP_04540655.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229455636|gb|EEO61357.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 395 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 V+T+ C C +CP C EG + + + CI+CG+CE CP+ Sbjct: 3 VITDKVTCCGCWACENICPKHCVVMKEDDEGFRYPEVDVEVCIECGLCEAVCPI 56 >gi|291285965|ref|YP_003502781.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] gi|290883125|gb|ADD66825.1| NADH-quinone oxidoreductase, chain I [Denitrovibrio acetiphilus DSM 12809] Length = 165 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 12/62 (19%) Query: 9 CILCKHTDCVEVCPVDCFY-EGE---------NFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C +VCP +C + E + + CI CG CE CPVDAI Sbjct: 61 CVGCYL--CQKVCPSECIHIETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMG 118 Query: 59 TE 60 E Sbjct: 119 WE 120 >gi|237654277|ref|YP_002890591.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237625524|gb|ACR02214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 83 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP Y+GE I P++C +C C+ CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAIYQGEEIYEIDPNKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPLD 62 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAIYQGEE 29 >gi|217970164|ref|YP_002355398.1| NADH dehydrogenase subunit I [Thauera sp. MZ1T] gi|217507491|gb|ACK54502.1| NADH-quinone oxidoreductase, chain I [Thauera sp. MZ1T] Length = 161 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG CE CPVDAI Sbjct: 60 ERCIACKL--CEAICPAMAITIESDQRDDGSRRTTRYDIDLTKCIFCGFCEEACPVDAI 116 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 60 ERCIACKLCEAICPAMAITIESDQRDD 86 >gi|197122277|ref|YP_002134228.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196172126|gb|ACG73099.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 300 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C CPV + + +P+ C+ C C CP D K + Sbjct: 104 CMHCLAPGCASACPVKAMSKSPEGPVVYNPNRCMGCRYCMIACPFDVPKYE 154 >gi|148225889|ref|NP_001087331.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) [Xenopus laevis] gi|51593201|gb|AAH78569.1| MGC85457 protein [Xenopus laevis] Length = 207 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C CP +G I +CI CG C+ CPVDAI Sbjct: 106 ERCIACKL--CEAACPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 162 Score = 40.5 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 106 ERCIACKLCEAACPAQAITIEAEPRAD 132 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 147 CIYCGF--CQEACPVDAIVEGPNF 168 >gi|49082534|gb|AAT50667.1| PA0362 [synthetic construct] Length = 84 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDT 59 I D Sbjct: 59 IPLDD 63 >gi|115524538|ref|YP_781449.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisA53] gi|122296203|sp|Q07NL5|NUOI2_RHOP5 RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|115518485|gb|ABJ06469.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisA53] Length = 162 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTERYDIDMVKCIYCGLCQEACPVDAI 117 >gi|332800413|ref|YP_004461912.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] gi|332698148|gb|AEE92605.1| NADH dehydrogenase (quinone) [Tepidanaerobacter sp. Re1] Length = 625 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 13/67 (19%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M +VV + C +VC +G LAI PD+C CG C CP AI+ T Sbjct: 551 MAHVVEKRCPS-------KVC------KGLGQLAIDPDKCRGCGKCRKICPASAIEGKTR 597 Query: 61 PGLELWL 67 ++ + Sbjct: 598 EPHKIDI 604 >gi|332702612|ref|ZP_08422700.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552761|gb|EGJ49805.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 267 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV VCP F + + + CI C C CP A Sbjct: 128 CNHCEYPPCVRVCPTKATFQRADGIVLMDFHRCIGCRYCMAGCPYGA 174 >gi|319424969|gb|ADV53043.1| surface localized dimethyl sulfoxide reductase, ferredoxin subunit, DmsB [Shewanella putrefaciens 200] Length = 226 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + + CI C C CP DA + D Sbjct: 80 AYYMSIGCNHCNEPVCVKACPTGAMHKRREDGLVQVATELCIGCESCARACPYDAPQLDI 139 Query: 60 E 60 E Sbjct: 140 E 140 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V TE CI C+ C CP D + +C C +C CP+ A Sbjct: 115 VATELCIGCE--SCARACPYDAPQLDIERKVM--TKCDGCSDRLAEGKKPICVDSCPLRA 170 Query: 55 IKPDTEPGLE 64 + DT L+ Sbjct: 171 LDFDTMENLK 180 >gi|311278762|ref|YP_003940993.1| NADH-quinone oxidoreductase, chain I [Enterobacter cloacae SCF1] gi|308747957|gb|ADO47709.1| NADH-quinone oxidoreductase, chain I [Enterobacter cloacae SCF1] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 14/70 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAI 55 +E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 SERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPGL 63 + PD E G Sbjct: 115 QLTPDFELGE 124 >gi|300692634|ref|YP_003753629.1| 4Fe-4S ferredoxin-type protein [Ralstonia solanacearum PSI07] gi|299079694|emb|CBJ52371.1| 4Fe-4S ferredoxin-type protein [Ralstonia solanacearum PSI07] Length = 82 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPVD Sbjct: 1 MALIITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|302877710|ref|YP_003846274.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580499|gb|ADL54510.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Gallionella capsiferriformans ES-2] Length = 84 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D +G+ I P++C +C C CPVD Sbjct: 1 MALLITDECINCDV--CEPECPNDAISQGDTIYEIDPNKCTECVGHYDTPQCVEVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P +E ++ ++Y Sbjct: 59 I-PKDPAHVENNAQLQAKY 76 >gi|257064545|ref|YP_003144217.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792198|gb|ACV22868.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 173 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVD 53 C C CV VCPV E + + P+ CI C C+ CP D Sbjct: 53 ACNHCTAPACVAVCPVGALTKREDDGIVVHDPEICIGCLSCQQACPYD 100 >gi|156379274|ref|XP_001631383.1| predicted protein [Nematostella vectensis] gi|156218422|gb|EDO39320.1| predicted protein [Nematostella vectensis] Length = 182 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 81 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 137 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 81 ERCIACKLCEAICPAQAITIEAEERAD 107 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 122 CIYCGF--CQEACPVDAIVEGPNF 143 >gi|145355484|ref|XP_001421991.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582230|gb|ABP00285.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 167 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 122 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 107 CIFCGF--CQEACPVDAIVEGPNFEY 130 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 66 ERCIACKLCEAICPAQAITIEAEERED 92 >gi|20093689|ref|NP_613536.1| heterodisulfide reductase, subunit A [Methanopyrus kandleri AV19] gi|190358780|sp|Q8TYP4|HDRA1_METKA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1 gi|19886574|gb|AAM01466.1| Heterodisulfide reductase, subunit A [Methanopyrus kandleri AV19] Length = 669 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 22/81 (27%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C EVCP++ E G I + CI CG Sbjct: 243 YVDEDACTGCGV--CAEVCPIEVPNEFDLGIGTRKAIYVPFPQAMPLVYTIDMEHCIQCG 300 Query: 45 VCEPECPVD--AIKPDTEPGL 63 +CE CP D AI D EP Sbjct: 301 LCEEACPQDPPAIDFDQEPEE 321 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V + C C C +VCP D +G+ + C CG C CP A++ Sbjct: 586 ATVDEDVCGGCG--ACAQVCPFDAIEMVEKDGKRVAEVQDVACQGCGQCAAACPSGAMQL 643 Query: 58 DTEPGLELWLKI 69 +L +I Sbjct: 644 RYYRDEQLMPQI 655 >gi|114561799|ref|YP_749312.1| twin-arginine translocation pathway signal [Shewanella frigidimarina NCIMB 400] gi|114333092|gb|ABI70474.1| Twin-arginine translocation pathway signal [Shewanella frigidimarina NCIMB 400] Length = 228 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 8 NCILCKHTDCVEVCPVD-CFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C C+ CV VCP F + E+ + ++ D+C+ C C CP D I P T+ Sbjct: 96 SCQHCEDAPCVNVCPTGAAFIDKESGIVSVNADKCVGCQYCILACPYDVRFINPVTKAAD 155 Query: 64 E 64 + Sbjct: 156 K 156 >gi|332526062|ref|ZP_08402200.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Rubrivivax benzoatilyticus JA2] gi|332109905|gb|EGJ10533.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Rubrivivax benzoatilyticus JA2] Length = 321 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C + CV+ CP + E + + + D CI C C CP A + Sbjct: 171 CMQCDNPPCVKACPTKATWKEPDGIVVVDYDWCIGCRYCMTACPYWARHFNWTEPQIPAA 230 Query: 68 KINSEYA 74 + N + Sbjct: 231 EFNPNLS 237 >gi|256838495|ref|ZP_05544005.1| flavodoxin [Parabacteroides sp. D13] gi|256739414|gb|EEU52738.1| flavodoxin [Parabacteroides sp. D13] Length = 268 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ T CI C+ C+++CP+ F + L CI C +C CP +I Sbjct: 185 FLNTSTCINCE--KCIKICPMHIFARRDTVLPTDEKNCIQCRLCADNCPTSSIYIHESFL 242 Query: 63 LELWLKINSEYATQWPN 79 L + I ++ + N Sbjct: 243 NGLRIAIRESFSDKLQN 259 >gi|225630646|ref|YP_002727437.1| NADH dehydrogenase I, I subunit [Wolbachia sp. wRi] gi|225592627|gb|ACN95646.1| NADH dehydrogenase I, I subunit [Wolbachia sp. wRi] Length = 169 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 68 ERCIACKL--CEVICPAQAIVIEAEEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 124 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 68 ERCIACKLCEVICPAQAIVIEAEERED 94 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 109 CIYCGL--CQEACPVDAIVEGPNF 130 >gi|74317665|ref|YP_315405.1| heterodisulfide reductase subunit A [Thiobacillus denitrificans ATCC 25259] gi|74057160|gb|AAZ97600.1| heterodisulfide reductase, subunit A [Thiobacillus denitrificans ATCC 25259] Length = 752 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C CK C CP E E F + C CG C CPV I + Sbjct: 544 EGCTQCK--RCTVECPFGAIDEDEKRFPVFNESRCRRCGTCMGACPVRVISFE 594 >gi|292492764|ref|YP_003528203.1| electron transport complex, RnfABCDGE type subunit beta [Nitrosococcus halophilus Nc4] gi|291581359|gb|ADE15816.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus halophilus Nc4] Length = 209 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 14/97 (14%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DTE 60 V+ EN CI C T C++ CPVD L + EC C +C CPVD I+ Sbjct: 106 VIDENRCIGC--TLCIQACPVDAILGAAKQLHTVIAAECTGCELCVAPCPVDCIEMVPLT 163 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVK 97 P L W +WP + LP A + K Sbjct: 164 PDLGSW---------KWPFPEVIEPPLPIALQQQKAK 191 >gi|255321043|ref|ZP_05362213.1| ferredoxin [Acinetobacter radioresistens SK82] gi|262379542|ref|ZP_06072698.1| ferredoxin [Acinetobacter radioresistens SH164] gi|255301867|gb|EET81114.1| ferredoxin [Acinetobacter radioresistens SK82] gi|262298999|gb|EEY86912.1| ferredoxin [Acinetobacter radioresistens SH164] Length = 87 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C+ CP D YEG I + C +C C CP+D Sbjct: 1 MALHITQQCINCD--MCLPECPNDAIYEGIKIYEIDAERCTECVGFYEQETCMAVCPIDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I+ + +++ + ++ ++ K Sbjct: 59 IELN-----PQYIETQEQLLEKFKHLNQFK 83 >gi|187777468|ref|ZP_02993941.1| hypothetical protein CLOSPO_01035 [Clostridium sporogenes ATCC 15579] gi|187774396|gb|EDU38198.1| hypothetical protein CLOSPO_01035 [Clostridium sporogenes ATCC 15579] Length = 449 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I ++C DCG C CP +I Sbjct: 81 DCSMDCKKERGKTFCQNSCPFDAILINKETNSTYIDTEKCTDCGFCVEACPTGSI 135 >gi|218778375|ref|YP_002429693.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfatibacillum alkenivorans AK-01] gi|218759759|gb|ACL02225.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfatibacillum alkenivorans AK-01] Length = 774 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 7/48 (14%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECP 51 C C C +CP E + + P++CI CG C CP Sbjct: 716 CRDCG--ICEAICPQAAITRVEEPGKRFEMVVDPEKCIGCGFCAGACP 761 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 9/47 (19%) Query: 18 VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V C +DC G C DCG+CE CP AI EPG Sbjct: 703 VNTCAMDCSSCG---------TCRDCGICEAICPQAAITRVEEPGKR 740 >gi|156933129|ref|YP_001437045.1| NADH dehydrogenase subunit I [Cronobacter sakazakii ATCC BAA-894] gi|226737391|sp|A7MPB5|NUOI_ENTS8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156531383|gb|ABU76209.1| hypothetical protein ESA_00939 [Cronobacter sakazakii ATCC BAA-894] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|304314565|ref|YP_003849712.1| polyferredoxin [Methanothermobacter marburgensis str. Marburg] gi|6996551|emb|CAB75573.1| polyferredoxin [Methanothermobacter thermautotrophicus] gi|302588024|gb|ADL58399.1| polyferredoxin [Methanothermobacter marburgensis str. Marburg] Length = 251 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 VT+ C C C CP GE CI CG C CP DAIK + E G Sbjct: 129 VTDKCTACG--TCERFCPTGAIRVGETAAV-DRSICIGCGACVNVCPSDAIKLERELG 183 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 10/59 (16%) Query: 9 CILCKHTDCVEVCPVDCFYEG--------ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CI C CV VCP D L + D C++C VCE CP AI+ + Sbjct: 161 CIGCG--ACVNVCPSDAIKLERELGPVIETRRLMVDQDACVECLVCEENCPTGAIRIED 217 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V + C+ C C E CP + + + D+CI C VC +CPV A+K + Sbjct: 193 VDQDACVECLV--CEENCPTGAIRIEDGEVVVDGDKCILCEVCSSKCPVAALKLE 245 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 26/76 (34%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHP------------------------DEC 40 + +NC+ C+ C + CPV C E+ I D+C Sbjct: 76 ILDNCVKCE--ICAQTCPVRCINVVESTATIDEDVTYNLEYLRIPHRTLRMRDIQVTDKC 133 Query: 41 IDCGVCEPECPVDAIK 56 CG CE CP AI+ Sbjct: 134 TACGTCERFCPTGAIR 149 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 +T C+ C CVE CPVD + I D C+ C +C CPV I Sbjct: 46 ITPKCVRCNL--CVEECPVDAISDSSASRAARIL-DNCVKCEICAQTCPVRCI 95 >gi|37679436|ref|NP_934045.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio vulnificus YJ016] gi|37198180|dbj|BAC94016.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio vulnificus YJ016] Length = 265 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 135 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQ 182 >gi|15604627|ref|NP_221145.1| NADH dehydrogenase subunit I [Rickettsia prowazekii str. Madrid E] gi|6647675|sp|Q9ZCF8|NUOI_RICPR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|3861322|emb|CAA15221.1| NADH DEHYDROGENASE I CHAIN I (nuoI) [Rickettsia prowazekii] gi|292572444|gb|ADE30359.1| NADH dehydrogenase I chain I [Rickettsia prowazekii Rp22] Length = 159 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E ++ I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIESDERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 58 ERCIACKLCEAICPAQAIVIESDERDD 84 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|116749579|ref|YP_846266.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698643|gb|ABK17831.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1013 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C C CVE CP + E E ++ C CG C CP +A+ + Sbjct: 945 DRCSGC--RACVECCPFGAVSYLEREGRCEVNQALCKGCGTCASACPSEAVSLMGFSNPQ 1002 Query: 65 LWLKINSEYAT 75 ++ +I+ + Sbjct: 1003 IYRQIDEALSA 1013 Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 25/82 (30%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEGEN---------------FLAIHPDECI--- 41 Y+ + CI C C + CP D F G N AI + C+ Sbjct: 106 YIDAKKCIACGV--CAQKCPRKVPDAFNLGLNRRKAAYVKYPQAVPLKYAIDREHCLYFE 163 Query: 42 --DCGVCEPECPVDAIKPDTEP 61 C CE CP A+ + E Sbjct: 164 KGKCRACEKFCPAGAVNFEDED 185 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 12/39 (30%) Query: 24 DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 D G + D C C C CP A+ G Sbjct: 931 DFIVAGGVTAVVEKDRCSGCRACVECCPFGAVSYLEREG 969 >gi|325833013|ref|ZP_08165640.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|325485730|gb|EGC88195.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 205 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ C+ VCP + + + + I ++CI C +C CP +A Sbjct: 64 ACQHCENPACLRVCPTGATYKDDKGRVEIDYEKCIGCRMCMAACPYNA 111 >gi|296132692|ref|YP_003639939.1| NIL domain protein [Thermincola sp. JR] gi|296031270|gb|ADG82038.1| NIL domain protein [Thermincola potens JR] Length = 137 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C H C +CPV +A ++CI CG+C CPV AI+ Sbjct: 82 DRCTHCGH--CTSLCPVGALYIIRPSMEVAFDEEKCIVCGLCLKACPVKAIE 131 >gi|303316716|ref|XP_003068360.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108041|gb|EER26215.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038169|gb|EFW20105.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Coccidioides posadasii str. Silveira] Length = 232 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 131 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 188 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 189 ESP----------NAEYATETREELLYNKEKLLANGDKWE 218 >gi|289808203|ref|ZP_06538832.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 138 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 91 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 137 >gi|167772590|ref|ZP_02444643.1| hypothetical protein ANACOL_03969 [Anaerotruncus colihominis DSM 17241] gi|167665068|gb|EDS09198.1| hypothetical protein ANACOL_03969 [Anaerotruncus colihominis DSM 17241] Length = 595 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 E C C T C CPV +N I +CI CG C +C AI Sbjct: 545 EKCKGC--TLCARQCPVGAISGSVKNPHVIDQTKCIKCGACMEKCKFGAI 592 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I ++C C +C +CPV AI Sbjct: 539 QYRIEKEKCKGCTLCARQCPVGAI 562 >gi|167470482|ref|ZP_02335186.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis FV-1] Length = 190 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 112 AFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 165 >gi|115455639|ref|NP_001051420.1| Os03g0774200 [Oryza sativa Japonica Group] gi|31745233|gb|AAP68893.1| putative NADH dehydrogenase [Oryza sativa Japonica Group] gi|108711316|gb|ABF99111.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] gi|113549891|dbj|BAF13334.1| Os03g0774200 [Oryza sativa Japonica Group] gi|215686857|dbj|BAG89707.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767445|dbj|BAG99673.1| unnamed protein product [Oryza sativa Japonica Group] Length = 223 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 122 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 178 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 122 ERCIACKLCEAICPAQAITIEAEERED 148 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 163 CIYCGF--CQEACPVDAIVEGPNF 184 >gi|78358565|ref|YP_390014.1| heterodisulfide reductase subunit A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220970|gb|ABB40319.1| heterodisulfide reductase, A subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 652 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 27/85 (31%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECI- 41 YV C C C E CP D F EG I P+ CI Sbjct: 235 AYVDWSLCTGCG--ACEEKCPARKTYDKFNEGIGRTTAIKIAFPQAIPKKAVITPETCIM 292 Query: 42 ----DCGVCEPECPVDAIKPDTEPG 62 CG C CP AI+ D + Sbjct: 293 LTKGKCGNCAKVCPAGAIQFDQKDS 317 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGE----NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C E CP E ++ C CG+C CP AI+ + Sbjct: 584 CVGCG--KCRETCPFGAIEMTEFRGMPKASVVETVCQGCGICAVTCPQGAIQLQHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 >gi|22125976|ref|NP_669399.1| electron transport complex protein RnfB [Yersinia pestis KIM 10] gi|45441843|ref|NP_993382.1| electron transport complex protein RnfB [Yersinia pestis biovar Microtus str. 91001] gi|108807599|ref|YP_651515.1| electron transport complex protein RnfB [Yersinia pestis Antiqua] gi|108811875|ref|YP_647642.1| electron transport complex protein RnfB [Yersinia pestis Nepal516] gi|149365836|ref|ZP_01887871.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|162420711|ref|YP_001606697.1| electron transport complex protein RnfB [Yersinia pestis Angola] gi|165927379|ref|ZP_02223211.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938163|ref|ZP_02226722.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166010629|ref|ZP_02231527.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166210969|ref|ZP_02237004.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167400916|ref|ZP_02306422.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420206|ref|ZP_02311959.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425000|ref|ZP_02316753.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929341|ref|YP_002347216.1| electron transport complex protein RnfB [Yersinia pestis CO92] gi|229894931|ref|ZP_04510109.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|229897673|ref|ZP_04512829.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898319|ref|ZP_04513466.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|229902178|ref|ZP_04517299.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|270490650|ref|ZP_06207724.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis KIM D27] gi|294503722|ref|YP_003567784.1| electron transport complex protein RnfB [Yersinia pestis Z176003] gi|24638185|sp|Q8ZEC9|RNFB_YERPE RecName: Full=Electron transport complex protein rnfB gi|122979617|sp|Q1C7K2|RNFB_YERPA RecName: Full=Electron transport complex protein rnfB gi|123073406|sp|Q1CIY8|RNFB_YERPN RecName: Full=Electron transport complex protein rnfB gi|226735436|sp|A9R8U7|RNFB_YERPG RecName: Full=Electron transport complex protein rnfB gi|21958920|gb|AAM85650.1|AE013811_3 hypothetical protein y2086 [Yersinia pestis KIM 10] gi|45436705|gb|AAS62259.1| putative iron-sulfur protein [Yersinia pestis biovar Microtus str. 91001] gi|108775523|gb|ABG18042.1| iron-sulfur protein [Yersinia pestis Nepal516] gi|108779512|gb|ABG13570.1| putative iron-sulfur protein [Yersinia pestis Antiqua] gi|115347952|emb|CAL20874.1| putative iron-sulfur protein [Yersinia pestis CO92] gi|149292249|gb|EDM42323.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis CA88-4125] gi|162353526|gb|ABX87474.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis Angola] gi|165913824|gb|EDR32442.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165920645|gb|EDR37893.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165990331|gb|EDR42632.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166208149|gb|EDR52629.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166961901|gb|EDR57922.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049769|gb|EDR61177.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056187|gb|EDR65965.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681074|gb|EEO77169.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Nepal516] gi|229688609|gb|EEO80678.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. India 195] gi|229694010|gb|EEO84059.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702026|gb|EEO90047.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis Pestoides A] gi|262362158|gb|ACY58879.1| electron transport complex protein RnfB [Yersinia pestis D106004] gi|262365491|gb|ACY62048.1| electron transport complex protein RnfB [Yersinia pestis D182038] gi|270339154|gb|EFA49931.1| electron transport complex, RnfABCDGE type, B subunit [Yersinia pestis KIM D27] gi|294354181|gb|ADE64522.1| electron transport complex protein RnfB [Yersinia pestis Z176003] gi|320014910|gb|ADV98481.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 188 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIIGATRAMHTVLSDLCTGCDLCVAPCPTDCIE 163 >gi|332704000|ref|ZP_08424088.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332554149|gb|EGJ51193.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 659 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C C+ CP + G+ + C CG+C CP AI+ + Sbjct: 584 CIGCG--KCIATCPFGAIEAIDFRGQPKAQVIETVCQGCGICTATCPQGAIQLQHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 26/84 (30%) Query: 3 YVVTENCILCKHTDCVEVCP----VDCFYE---------------GENFLAIHPDECID- 42 YV E C C C+E CP D F E I P+ C Sbjct: 236 YVNWEACTGCGL--CMEKCPSKKAKDDFNEQIGTTTAINIPSPQAIPKKAKIDPEFCRQF 293 Query: 43 ----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AI+ D + Sbjct: 294 TKGKCGVCAKICPSGAIEYDQQDE 317 >gi|326561163|gb|EGE11528.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 7169] gi|326561574|gb|EGE11915.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 46P47B1] gi|326567649|gb|EGE17757.1| NADH dehydrogenase subunit I [Moraxella catarrhalis 12P80B1] gi|326567948|gb|EGE18045.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC1] gi|326569471|gb|EGE19531.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC8] gi|326572766|gb|EGE22752.1| NADH dehydrogenase subunit I [Moraxella catarrhalis BC7] gi|326574014|gb|EGE23963.1| NADH dehydrogenase subunit I [Moraxella catarrhalis CO72] gi|326577456|gb|EGE27340.1| NADH dehydrogenase subunit I [Moraxella catarrhalis O35E] Length = 182 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L + + N Y + I+ + Sbjct: 118 LTPDFELGEYDRQNLVYEKEHLLISGVGKYPE 149 >gi|308049766|ref|YP_003913332.1| hydrogenase, Fe-only [Ferrimonas balearica DSM 9799] gi|307631956|gb|ADN76258.1| hydrogenase, Fe-only [Ferrimonas balearica DSM 9799] Length = 410 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKP 57 C C C + CP EG + A + D+C+ CG C CP DAI+ Sbjct: 22 CKGCD--ACKKFCPTGAI-EGASGAAHRVDHDKCVGCGQCMINCPFDAIEE 69 >gi|291514608|emb|CBK63818.1| electron transport complex, RnfABCDGE type, B subunit [Alistipes shahii WAL 8301] Length = 299 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+VC D N I P +C C C ECP AI+ Sbjct: 221 CIGCG--KCVKVCAFDAITVENNLAYIDPQKCKLCRKCVNECPTGAIR 266 Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%) Query: 13 KHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 DCV VC D + + D+C CG C CP Sbjct: 144 GFGDCVAVCAFDAIHINPETGLPEVDADKCTACGACVKACP 184 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 21/74 (28%) Query: 4 VVTENCILCKHTDCVEVCP-----------------VDCFYEGENFLAIHPDE--CIDCG 44 V + C C CV+ CP V C + + + + + CI CG Sbjct: 168 VDADKCTACG--ACVKACPKMIIELRKKWPKNRAVYVSCVSKDKGAVVMKACKAGCIGCG 225 Query: 45 VCEPECPVDAIKPD 58 C C DAI + Sbjct: 226 KCVKVCAFDAITVE 239 >gi|291279681|ref|YP_003496516.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Deferribacter desulfuricans SSM1] gi|290754383|dbj|BAI80760.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Deferribacter desulfuricans SSM1] Length = 586 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 T+ C CK CP +E + N I C++CGVC CP DAI E Sbjct: 527 TDKCKNCKICYEKFECP--AIFEDKLANAAKIDELLCVNCGVCMSVCPFDAIAYVDEVDD 584 Query: 64 E 64 E Sbjct: 585 E 585 >gi|217966538|ref|YP_002352044.1| protein of unknown function DUF362 [Dictyoglomus turgidum DSM 6724] gi|217335637|gb|ACK41430.1| protein of unknown function DUF362 [Dictyoglomus turgidum DSM 6724] Length = 378 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E CI C C CP N + I +CI C C CP AI+ + Sbjct: 319 EKCIKC--RICENSCPNKAITYDPNKMIIDYKKCISCFCCHELCPQKAIRLE 368 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPD 58 I ++CI C +CE CP AI D Sbjct: 315 VIEDEKCIKCRICENSCPNKAITYD 339 >gi|160936135|ref|ZP_02083508.1| hypothetical protein CLOBOL_01031 [Clostridium bolteae ATCC BAA-613] gi|158440945|gb|EDP18669.1| hypothetical protein CLOBOL_01031 [Clostridium bolteae ATCC BAA-613] Length = 464 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C +C++ CP + +I+ CIDCG C CP A Sbjct: 15 CKGC--INCIKRCPTEAIRVRGGKASINNKFCIDCGECIRVCPHHA 58 >gi|153004662|ref|YP_001378987.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152028235|gb|ABS26003.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 295 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C C CPV + + P +C+ C C CP D K + + Sbjct: 103 CMHCLAPGCASACPVRAMDKSPEGPVVYDPSKCMGCRYCMVACPFDVPKYEYD 155 >gi|126179637|ref|YP_001047602.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanoculleus marisnigri JR1] gi|125862431|gb|ABN57620.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanoculleus marisnigri JR1] Length = 424 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 20/77 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 Y++ + C C C+ +CPV+ + + + + CI+CG Sbjct: 98 YILEDECNGCGD--CIAICPVEVYNRFDAGIGVRKAIYKPHAQAVPDIVVKDNEHCIECG 155 Query: 45 VCEPECPVDAIKPDTEP 61 +C C +AI + E Sbjct: 156 LCYDVCGKEAILREDEE 172 >gi|90413851|ref|ZP_01221838.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum 3TCK] gi|90325162|gb|EAS41665.1| hypothetical iron-sulfur cluster-binding protein [Photobacterium profundum 3TCK] Length = 566 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECP 51 +++C LC CV VCP F+ G L + ++CI CG+CE CP Sbjct: 431 SDDCTLC--MSCVAVCPTRAFHAVGGRPGLQLIEEDCIQCGLCEKACP 476 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 19/48 (39%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CV+ CP + + I+P C G C CP +AI + Sbjct: 203 CVDACPAGALSSLGHAIEINPYLCQGVGTCATACPTEAITYALPDPEK 250 >gi|18977042|ref|NP_578399.1| putative ATPase RIL [Pyrococcus furiosus DSM 3638] gi|18892677|gb|AAL80794.1| RNase l inhibitor [Pyrococcus furiosus DSM 3638] Length = 590 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 13/68 (19%) Query: 7 ENCI--LCKHTDCVEVCPVDCFYEGENFLAIHPD---------ECIDCGVCEPECPVDAI 55 + C C H C VCPV+ G + I + C CG+C +CP AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRM--GGEAIIIDEENYKPIIQEASCTGCGICVHKCPFKAI 66 Query: 56 KPDTEPGL 63 P Sbjct: 67 SIVNLPEQ 74 >gi|24372600|ref|NP_716642.1| NADH dehydrogenase subunit I [Shewanella oneidensis MR-1] gi|81744862|sp|Q8EI36|NUOI_SHEON RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|24346625|gb|AAN54087.1|AE015546_4 NADH dehydrogenase I, I subunit [Shewanella oneidensis MR-1] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSERDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|121605833|ref|YP_983162.1| FAD/NAD(P)-binding oxidoreductase subunit [Polaromonas naphthalenivorans CJ2] gi|120594802|gb|ABM38241.1| benzoyl-CoA oxygenase, component A [Polaromonas naphthalenivorans CJ2] Length = 427 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 10/63 (15%) Query: 1 MT--YVVTEN------CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 MT +V+ ++ CI C C +CPV + ++C C C CP Sbjct: 3 MTEIHVIKQHLIDPEICIRCN--TCEAICPVSAITHDSRNYVVDAEKCNFCMACISPCPT 60 Query: 53 DAI 55 +I Sbjct: 61 GSI 63 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI D+ Sbjct: 14 IDPEICIRCNTCEAICPVSAITHDSR 39 >gi|329904067|ref|ZP_08273662.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] gi|327548151|gb|EGF32865.1| 4Fe-4S ferredoxin, iron-sulfur binding [Oxalobacteraceae bacterium IMCC9480] Length = 86 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D + G I P +C +C C+ CPV Sbjct: 1 MALLITDECINCDV--CEPECPNDAIFLGPEIYQIDPGKCTECVGHFNEPQCQQVCPVSC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPFD 62 >gi|325281676|ref|YP_004254218.1| ferredoxin-type protein [Odoribacter splanchnicus DSM 20712] gi|324313485|gb|ADY34038.1| ferredoxin-type protein [Odoribacter splanchnicus DSM 20712] Length = 505 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 16/76 (21%) Query: 4 VVTENCI------LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPECPV 52 V ENCI C C E CP N L I +PD C+ CG CE CPV Sbjct: 413 FVRENCIVNTDETSCG--ACSEHCPTQAVTMIPYKNGLTIPSVNPDICVGCGGCEYVCPV 470 Query: 53 ---DAIKPDTEPGLEL 65 AI + P + Sbjct: 471 RPFRAIYIEGNPVHQE 486 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 9/46 (19%) Query: 17 CVEVCPVD-------CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C VCPV + G + I D C+ CG+CE +C I Sbjct: 196 CNTVCPVGTLLGFLSRYSFG--RIRIEADACVSCGLCERQCKAGCI 239 >gi|296112939|ref|YP_003626877.1| NADH-quinone oxidoreductase subunit I [Moraxella catarrhalis RH4] gi|295920633|gb|ADG60984.1| NADH-quinone oxidoreductase subunit I [Moraxella catarrhalis RH4] Length = 182 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ C+ CG+CE CP AI+ Sbjct: 60 ERCVACNL--CAVACPVGCISLQKAEREDGRWYPEFFRINFSRCVFCGMCEEACPTTAIQ 117 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKKESLP 88 + L + + N Y + I+ + Sbjct: 118 LTPDFELGEYDRQNLVYEKEHLLISGVGKYPE 149 >gi|294495379|ref|YP_003541872.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalophilus mahii DSM 5219] gi|292666378|gb|ADE36227.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalophilus mahii DSM 5219] Length = 286 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + + C C C CPVD + L ++C CG C CP A Sbjct: 165 IDDKCTRCGL--CETTCPVDAIKIENDTLYFDEEKCNLCGDCVFVCPTSA 212 >gi|255318863|ref|ZP_05360089.1| iron-sulfur cluster-binding protein [Acinetobacter radioresistens SK82] gi|255304119|gb|EET83310.1| iron-sulfur cluster-binding protein [Acinetobacter radioresistens SK82] Length = 100 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 13/88 (14%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDAIKPD 58 +T+ CI C C VCP + + GE IHPD C +C C+ CPVD I Sbjct: 18 ITDECINCDV--CEPVCPNEAIFMGEMIYEIHPDLCTECVGHHEQPQCQLFCPVDCI--- 72 Query: 59 TEPGLELWLKINSEYATQWPNITTKKES 86 P ++ E ++ +T +K + Sbjct: 73 --PHDPNHVETEDELMQKYKMLTAQKSA 98 >gi|238751241|ref|ZP_04612735.1| NADH-quinone oxidoreductase subunit I [Yersinia rohdei ATCC 43380] gi|238710515|gb|EEQ02739.1| NADH-quinone oxidoreductase subunit I [Yersinia rohdei ATCC 43380] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|242278519|ref|YP_002990648.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242121413|gb|ACS79109.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 260 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPVDC---FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C H CV VCPV EG I+P CI C C CP A Sbjct: 73 PCMQCGHPACVPVCPVVATTKDEEGGIVSQIYP-RCIGCRYCMAACPYHA 121 >gi|187932967|ref|YP_001886497.1| iron hydrogenase, electron-transfer subunit [Clostridium botulinum B str. Eklund 17B] gi|187721120|gb|ACD22341.1| putative iron hydrogenase, electron-transfer subunit [Clostridium botulinum B str. Eklund 17B] Length = 626 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 1 MTYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 M+Y + + C C + C +CP E + I +CI CG C C AI+ Sbjct: 569 MSYEIDKDKCKGC--SKCARMCPAGAITGEIKKPYTIDQSKCIKCGACMDGCAFKAIQ 624 Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D+C C C CP AI + + Sbjct: 571 YEIDKDKCKGCSKCARMCPAGAITGEIKKP 600 >gi|218439098|ref|YP_002377427.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7424] gi|218171826|gb|ACK70559.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7424] Length = 533 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M Y + +NC C C CP + + I C DC C CP+ + Sbjct: 1 MPYTIPDNCYSCG--TCKPQCPTGAIHLDDGKYWIESGLCNDCNEYAGEPQCVVHCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PVP 61 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 PD C CG C+P+CP AI D + W++ Sbjct: 1 MPYTIPDNCYSCGTCKPQCPTGAIHLD---DGKYWIE 34 >gi|157779399|gb|ABV71243.1| NADPH-dependent sulfur oxidoreductase B subunit [Thermococcus litoralis DSM 5473] Length = 555 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ + C C T C CPV E I + CI CG C C DAIK Sbjct: 496 IIADKCTGC--TACAIFCPVKAISGEKLKPHVIDQEACIKCGTCYNVCRFDAIK 547 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 12/27 (44%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 I D+C C C CPV AI + Sbjct: 493 KYVIIADKCTGCTACAIFCPVKAISGE 519 >gi|170758534|ref|YP_001786732.1| iron-sulfur cluster-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169405523|gb|ACA53934.1| iron-sulfur cluster-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 425 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLEKHSSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYAT 75 I+ D C+ CG C CP++AIK + KI +E + Sbjct: 289 INKDRCVGCGKCTKVCPMEAIKLKETSLEKHSSKI-AELSE 328 >gi|238763933|ref|ZP_04624890.1| NADH-quinone oxidoreductase subunit I [Yersinia kristensenii ATCC 33638] gi|238784993|ref|ZP_04628991.1| NADH-quinone oxidoreductase subunit I [Yersinia bercovieri ATCC 43970] gi|238697901|gb|EEP90661.1| NADH-quinone oxidoreductase subunit I [Yersinia kristensenii ATCC 33638] gi|238714109|gb|EEQ06123.1| NADH-quinone oxidoreductase subunit I [Yersinia bercovieri ATCC 43970] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|323476735|gb|ADX81973.1| thiamine pyrophosphate domain, TPP-binding protein [Sulfolobus islandicus HVE10/4] Length = 612 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 4/64 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGL- 63 E C C CP + I CI CG C P CP AI K D Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAISLKGDKPEKWD 607 Query: 64 ELWL 67 ELWL Sbjct: 608 ELWL 611 >gi|291326676|ref|ZP_06125402.2| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291313411|gb|EFE53864.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 206 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CV CP + E + + + C+ C CE CP A + D Sbjct: 60 SYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVDQSICVGCRYCELRCPYGAPQFDE 119 Query: 60 EPGL 63 + L Sbjct: 120 KKKL 123 >gi|255691579|ref|ZP_05415254.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides finegoldii DSM 17565] gi|260622788|gb|EEX45659.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides finegoldii DSM 17565] Length = 300 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----KPDTEP 61 T +CI C CV+ CP + N I P++C C C CP ++I P +P Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPNKCKSCRKCVEVCPQNSIIELNFPPRKP 275 Query: 62 GLELWLK 68 E ++ Sbjct: 276 KAEEAVE 282 Score = 40.5 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDETKCTACGACVKACPKAIIE 189 >gi|220932674|ref|YP_002509582.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] gi|219993984|gb|ACL70587.1| Cobyrinic acid ac-diamide synthase [Halothermothrix orenii H 168] Length = 287 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP-- 61 V E C C CV+ C + + L + P+ C CG C+ CP AIK + Sbjct: 62 VDNEKCTGC--RKCVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVG 119 Query: 62 GLELWLKINSE-YATQWPNITTKKESLPSAAKMD-GVKQKYEKYFSPNPGG 110 L + KIN Y Q T +++++P K+ + K PG Sbjct: 120 KLREF-KINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKTVIIDAPPGS 169 >gi|242280314|ref|YP_002992443.1| nitrite and sulphite reductase 4Fe-4S region [Desulfovibrio salexigens DSM 2638] gi|242123208|gb|ACS80904.1| nitrite and sulphite reductase 4Fe-4S region [Desulfovibrio salexigens DSM 2638] Length = 207 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C+ +C+ CP + + + I ++C+ CG C CP + I Sbjct: 90 EGCIGCE--ECIRNCPDEAMEMVDGKVVITREKCLVCGYCTNVCPTEVI 136 >gi|188585713|ref|YP_001917258.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350400|gb|ACB84670.1| electron transport complex, RnfABCDGE type, B subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 286 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C C E CPV + I ++C++CG+C+ +CP I ++E Sbjct: 234 CLGCG--ICREQCPVGAINLDNDLAVIDQNKCVNCGLCKDKCPTACIVSESE 283 Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI CVE CP + ++ L I+ D C C C CP I+ + ++ Sbjct: 158 CIG--LATCVETCPFEAIEMRDDGLPRINHDICRGCATCVNTCPKSVIRLIPGDRYKHFI 215 Query: 68 KINSE 72 NS+ Sbjct: 216 YCNSQ 220 >gi|238798411|ref|ZP_04641892.1| NADH-quinone oxidoreductase subunit I [Yersinia mollaretii ATCC 43969] gi|238717725|gb|EEQ09560.1| NADH-quinone oxidoreductase subunit I [Yersinia mollaretii ATCC 43969] Length = 180 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|134296514|ref|YP_001120249.1| ferredoxin [Burkholderia vietnamiensis G4] gi|134139671|gb|ABO55414.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia vietnamiensis G4] Length = 313 Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP--- 57 ++ CI C T C++ CPVD + I C C +C CPVD I Sbjct: 103 AFIDESLCIGC--TLCLQACPVDAIIGAPKQMHTIIEPLCTGCDLCVAPCPVDCIAMVPV 160 Query: 58 -DTEPGLELWLKINSEYAT 75 G + W + ++ A Sbjct: 161 TGDRTGWDAWSQEQADAAR 179 >gi|257790232|ref|YP_003180838.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474129|gb|ACV54449.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 204 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C E CP + + ++I ++CI CG C CP +A K D Sbjct: 60 SYPLSMSCNHCDSPICFEKCPQSAIIKDADTGLMSIDEEKCIGCGTCAIVCPYNAPKVDE 119 Query: 60 E 60 E Sbjct: 120 E 120 >gi|193077843|gb|ABO12720.2| putative 4Fe-4S ferredoxin [Acinetobacter baumannii ATCC 17978] Length = 87 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCD--MCLPECPNTAIFEGSKVYQIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IKPD Sbjct: 59 IKPD 62 >gi|146414379|ref|XP_001483160.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 233 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 132 ERCIACKL--CEAICPAQAITIEAEERADGLRRTYKYDIDMTKCIYCGYCQESCPVDAI 188 >gi|146329455|ref|YP_001209464.1| electron transport complex protein, B subunit [Dichelobacter nodosus VCS1703A] gi|146232925|gb|ABQ13903.1| electron transport complex protein, B subunit [Dichelobacter nodosus VCS1703A] Length = 189 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 ++V + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 108 AWIVEDWCIGC--TRCIQACPVDAIVGSTQRMHTVLSAECTGCELCIAPCPVDCI 160 >gi|150402632|ref|YP_001329926.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033662|gb|ABR65775.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 393 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 E C+ C C CPV+ N L I + C+ C C CPV+ AI EP L Sbjct: 126 EICVSCG--SCENACPVNAISHNNNGLYEIDVNLCVSCKNCVEACPVENAIVTYDEPKLS 183 Query: 65 LWLKI 69 ++I Sbjct: 184 EQIEI 188 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 17/70 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF---------------LAIHPDECIDCGV 45 M +CI C +CVE CP + G L I + C+ CG Sbjct: 76 MPVFDAGSCINCG--NCVESCPTNVLEMGTLRKEASELLWNVPKLVNLLIDEEICVSCGS 133 Query: 46 CEPECPVDAI 55 CE CPV+AI Sbjct: 134 CENACPVNAI 143 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPV-DCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+V E CI C C C V + + N I+P+ C+ CG+C+ CPVDAI Sbjct: 276 YIVDEEKCIGC--RICYRACNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 8/56 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C + C E CP D +N CI+CG C CP + ++ Sbjct: 47 EKCISC--SACAESCPSDAIKMEYNEEFKKNMPVFDAGSCINCGNCVESCPTNVLE 100 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V CI C +CV+VCP E C+ G C CP AI+ Sbjct: 216 IVPSLCIGCG--NCVDVCPGSIDLERLEVT-----SCVKSGKCLEVCPTTAIR 261 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 P++CI C C CP DAIK + + Sbjct: 46 PEKCISCSACAESCPSDAIKMEYNEEFKK 74 >gi|125995233|dbj|BAF47148.1| FdxN [Gloeothece sp. KO68DGA] Length = 120 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 8/59 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVD 53 M++ +TENCI C C CP N I C DC C CP + Sbjct: 1 MSHTITENCINC--HRCRVACPTGAIKIRNNVFLIDATLCNDCQGYYGTPQCASVCPTN 57 Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 38 DECIDCGVCEPECPVDAIK 56 + CI+C C CP AIK Sbjct: 7 ENCINCHRCRVACPTGAIK 25 >gi|126178316|ref|YP_001046281.1| hypothetical protein Memar_0366 [Methanoculleus marisnigri JR1] gi|125861110|gb|ABN56299.1| protein of unknown function DUF362 [Methanoculleus marisnigri JR1] Length = 392 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ +CI C C +CPV E I CI C C C AI Sbjct: 327 VIASSCIGCG--KCERICPVHAITVAEGKATIDLSRCIRCYCCHEMCTEHAI 376 >gi|53804530|ref|YP_113813.1| NADH dehydrogenase subunit I [Methylococcus capsulatus str. Bath] gi|81682188|sp|Q608Y4|NUOI_METCA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|53758291|gb|AAU92582.1| NADH dehydrogenase I, I subunit [Methylococcus capsulatus str. Bath] Length = 171 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 49 ERCVACNL--CAAVCPVDCIALQKTEDVDGRWYPEFFRINFSRCILCGLCEEACPTYAIQ 106 >gi|83590444|ref|YP_430453.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573358|gb|ABC19910.1| putative sulfite reductase-associated electron transfer protein DsrO [Moorella thermoacetica ATCC 39073] Length = 258 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C CV VCP ++ ++ + I CI C C CP A + Sbjct: 120 CNHCDKPPCVRVCPTRATFKRQDGIVMIDYHRCIGCRYCMAACPYGARSFNFRDPRPYIK 179 Query: 68 KINSEYATQWPNITTKK 84 ++N Y T+ + K Sbjct: 180 ELNPAYPTREKGVVEKC 196 >gi|145219558|ref|YP_001130267.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205722|gb|ABP36765.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Chlorobium phaeovibrioides DSM 265] Length = 62 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M + +T+ C C C CPV G++ I+ C+DC C CPVD Sbjct: 1 MAHRITDECTYCG--ACEPECPVSAITPGDDLYVINESVCVDCVGHHDEPACVAICPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DEC CG CEPECPV AI P + Sbjct: 7 DECTYCGACEPECPVSAITPGDD 29 >gi|325525592|gb|EGD03378.1| putative dimethyl sulfoxide reductase subunit [Burkholderia sp. TJI49] Length = 247 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|302343184|ref|YP_003807713.1| indolepyruvate ferredoxin oxidoreductase, subunit alpha [Desulfarculus baarsii DSM 2075] gi|301639797|gb|ADK85119.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfarculus baarsii DSM 2075] Length = 632 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Query: 11 LCK-HTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CK H DC+ CP FY + AI+ +CI C +C CP +AI P E Sbjct: 581 KCKNHRDCINTVACP--AFYIAGDQPAINASQCIGCALCAQICPENAITPVKEA 632 >gi|298674635|ref|YP_003726385.1| nitrite and sulphite reductase [Methanohalobium evestigatum Z-7303] gi|298287623|gb|ADI73589.1| nitrite and sulphite reductase 4Fe-4S region [Methanohalobium evestigatum Z-7303] Length = 623 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V +NC C C +VC ++ + + CI CG C CP DA Sbjct: 493 VNDNCNGCG--RCADVCKLEAISVRGTTSYTNYNVCIGCGKCIKACPNDA 540 >gi|261369003|ref|ZP_05981886.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Subdoligranulum variabile DSM 15176] gi|282568874|gb|EFB74409.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Subdoligranulum variabile DSM 15176] Length = 247 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CI C C CP + + P CI C C CPV+A +PD + Sbjct: 176 CIDCG--RCAAACPTGAI-DAADPRQTDPARCIGCMRCVRLCPVEARRPDADA 225 >gi|262378879|ref|ZP_06072036.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262300164|gb|EEY88076.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 87 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 13/92 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCDV--CEPVCPNEAIFMGEMIYEIHPDLCTECVGHHEQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKKES 86 I P ++ E ++ +T +K + Sbjct: 59 I-----PHDPNHVETEDELMQKYKMLTAQKSA 85 >gi|255527517|ref|ZP_05394385.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7] gi|255508787|gb|EET85159.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7] Length = 426 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPEC 50 E C C C EVCPVD EG++ + I D+C+ CG C C Sbjct: 13 ELCTGC--RRCSEVCPVDAI-EGKDGVPQHIDTDKCVMCGQCVQVC 55 Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I + C C C CPVDAI+ Sbjct: 10 IDEELCTGCRRCSEVCPVDAIE 31 >gi|224367545|ref|YP_002601708.1| PflC1 [Desulfobacterium autotrophicum HRM2] gi|223690261|gb|ACN13544.1| PflC1 [Desulfobacterium autotrophicum HRM2] Length = 302 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+ CP + + + +CI CG C C +AI+ Sbjct: 55 CIGCG--KCVKACPQGALEISSSDSIVLDAKKCIACGKCVDVCCANAIE 101 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 21 CPVDCF-------YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CP+ C + + + +CI CG C CP A++ Sbjct: 29 CPMTCIWCHNPEGLSTKRHIVRYDKKCIGCGKCVKACPQGALE 71 >gi|218885175|ref|YP_002434496.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756129|gb|ACL07028.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 259 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV VCP F + + + CI C C CP A Sbjct: 122 CNHCENPPCVRVCPTKATFKRADGIVVMDYHRCIGCRFCMAGCPYGA 168 >gi|134045161|ref|YP_001096647.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662786|gb|ABO34432.1| membrane-bound hydrogenase subunit ehaP [Methanococcus maripaludis C5] Length = 393 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 17/70 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF---------------LAIHPDECIDCGV 45 M +CI C +CVE CP + G L I + C+ CG Sbjct: 76 MPVFDAGSCINCG--NCVESCPTNVLEMGTLRKEATELLWNVPKLVNLLIDEEICVSCGS 133 Query: 46 CEPECPVDAI 55 CE CPVDAI Sbjct: 134 CENACPVDAI 143 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 E C+ C C CPVD N L I + C+ C C CPV+ AI E GL Sbjct: 126 EICVSCG--SCENACPVDAISHNSNGLYEIDVNLCVSCKNCVEACPVENAIVTYDESGLS 183 Query: 65 LWLKI 69 ++I Sbjct: 184 EKIEI 188 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C C C V N I+P+ C+ CG+C+ CPVDAI Sbjct: 278 VDEEKCIGC--RICYRACNVPEAVSISNETNLPYINPEYCVRCGLCQNACPVDAI 330 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 8/56 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C + C E CP D +N CI+CG C CP + ++ Sbjct: 47 EKCISC--SACAESCPSDAIKMEYNEEFKKNMPVFDAGSCINCGNCVESCPTNVLE 100 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V CI C +CV+VC E C+ CG C CP AI+ Sbjct: 216 IVPSLCIGCG--NCVDVCSGSIDLERLEVT-----SCVRCGKCLEVCPTTAIRIGIPE 266 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 P++CI C C CP DAIK + + Sbjct: 46 PEKCISCSACAESCPSDAIKMEYNEEFKK 74 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 11/52 (21%) Query: 8 NCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDECIDCGVCEPEC 50 +C+ C C+EVCP G + ++CI C +C C Sbjct: 244 SCVRCG--KCLEVCPTTAIRIGIPEKITKRTAECYLVDEEKCIGCRICYRAC 293 >gi|41615088|ref|NP_963586.1| putative ATPase RIL [Nanoarchaeum equitans Kin4-M] gi|40068812|gb|AAR39147.1| NEQ299 [Nanoarchaeum equitans Kin4-M] Length = 574 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Query: 11 LCKHTDCVEVCPVD-----CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C + +C CP++ C + I CI CG+C +CP AIK Sbjct: 18 KCNY-ECYNFCPLNRAGKKCIEIIDGKPVIDESICIGCGLCVKKCPFKAIK 67 >gi|24373008|ref|NP_717050.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] gi|24347167|gb|AAN54495.1|AE015587_4 anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella oneidensis MR-1] Length = 224 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + + CI C C CP DA + D Sbjct: 78 AYYMSIGCNHCSQPVCVKACPTGAMHKRREDGLVQVATELCIGCESCARACPYDAPQLDI 137 Query: 60 E 60 E Sbjct: 138 E 138 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 13/70 (18%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V TE CI C+ C CP D + +C C +C CP+ A Sbjct: 113 VATELCIGCE--SCARACPYDAPQLDIERKVM--TKCDGCSDRLAEGKKPICVDSCPLRA 168 Query: 55 IKPDTEPGLE 64 + DT L Sbjct: 169 LDFDTMDNLR 178 >gi|146291733|ref|YP_001182157.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|145563423|gb|ABP74358.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] Length = 224 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + + CI C C CP DA + D Sbjct: 78 AYYMSIGCNHCNEPVCVKACPTGAMHKRREDGLVQVATELCIGCESCARACPYDAPQLDI 137 Query: 60 E 60 E Sbjct: 138 E 138 Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDA 54 V TE CI C+ C CP D + +C C +C CP+ A Sbjct: 113 VATELCIGCE--SCARACPYDAPQLDIERKVM--TKCDGCSDRLAEGKKPICVDSCPLRA 168 Query: 55 IKPDTEPGLE 64 + DT L+ Sbjct: 169 LDFDTMENLK 178 >gi|330830052|ref|YP_004393004.1| NADH-quinone oxidoreductase subunit I [Aeromonas veronii B565] gi|328805188|gb|AEB50387.1| NADH-quinone oxidoreductase subunit I [Aeromonas veronii B565] Length = 180 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|323475168|gb|ADX85774.1| ABC transporter related protein [Sulfolobus islandicus REY15A] gi|323477900|gb|ADX83138.1| ABC transporter related protein [Sulfolobus islandicus HVE10/4] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|313887323|ref|ZP_07821014.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923242|gb|EFR34060.1| 4Fe-4S binding domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 393 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 + C C+ C ++CP C EG ++ + D CI+C CE CP Sbjct: 8 QRCCGCE--ACRQICPKGCIRLERDEEGFDYPIVDTDRCIECHKCERVCPF 56 >gi|284998328|ref|YP_003420096.1| ABC transporter related protein [Sulfolobus islandicus L.D.8.5] gi|284446224|gb|ADB87726.1| ABC transporter related protein [Sulfolobus islandicus L.D.8.5] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|229585345|ref|YP_002843847.1| ATPase RIL [Sulfolobus islandicus M.16.27] gi|228020395|gb|ACP55802.1| ABC transporter related [Sulfolobus islandicus M.16.27] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|229581623|ref|YP_002840022.1| putative ATPase RIL [Sulfolobus islandicus Y.N.15.51] gi|228012339|gb|ACP48100.1| ABC transporter related [Sulfolobus islandicus Y.N.15.51] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|229579709|ref|YP_002838108.1| ATPase RIL [Sulfolobus islandicus Y.G.57.14] gi|228010424|gb|ACP46186.1| ABC transporter related [Sulfolobus islandicus Y.G.57.14] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|227828106|ref|YP_002829886.1| ATPase RIL [Sulfolobus islandicus M.14.25] gi|238620306|ref|YP_002915132.1| putative ATPase RIL [Sulfolobus islandicus M.16.4] gi|227459902|gb|ACP38588.1| ABC transporter related [Sulfolobus islandicus M.14.25] gi|238381376|gb|ACR42464.1| ABC transporter related [Sulfolobus islandicus M.16.4] Length = 602 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 22 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 81 Query: 64 ELWLKIN 70 K+N Sbjct: 82 IHRYKVN 88 >gi|227830813|ref|YP_002832593.1| ATPase RIL [Sulfolobus islandicus L.S.2.15] gi|227457261|gb|ACP35948.1| ABC transporter related [Sulfolobus islandicus L.S.2.15] Length = 600 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Query: 17 CVEVCPVD-----CFYEGE---NFLAIHPDECIDCGVCEPECPVDAIK-----PDTEPGL 63 C+ CPVD + I+ + CI CG+C +CP +AI + E + Sbjct: 20 CINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEV 79 Query: 64 ELWLKIN 70 K+N Sbjct: 80 IHRYKVN 86 >gi|257792145|ref|YP_003182751.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488764|ref|ZP_07947298.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|257476042|gb|ACV56362.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912134|gb|EFV33709.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 205 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ C+ VCP + + + + I ++CI C +C CP +A Sbjct: 64 ACQHCENPACLRVCPTGATYKDDKGRVEIDYEKCIGCRMCMAACPYNA 111 >gi|258406484|ref|YP_003199226.1| nitroreductase [Desulfohalobium retbaense DSM 5692] gi|257798711|gb|ACV69648.1| nitroreductase [Desulfohalobium retbaense DSM 5692] Length = 273 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +C CP C IH CI C C CP A+ + + Sbjct: 9 DRCIQCG--ECAADCPAMCISLDNGLPEIHEKRCIRCQHCLAVCPTAALSILDKDPDD 64 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 12/24 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I D CI CG C +CP I D Sbjct: 6 IDEDRCIQCGECAADCPAMCISLD 29 >gi|224418757|ref|ZP_03656763.1| hypothetical protein HcanM9_05713 [Helicobacter canadensis MIT 98-5491] gi|253826716|ref|ZP_04869601.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Helicobacter canadensis MIT 98-5491] gi|313142273|ref|ZP_07804466.1| polysulfide reductase chain B [Helicobacter canadensis MIT 98-5491] gi|253510122|gb|EES88781.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Helicobacter canadensis MIT 98-5491] gi|313131304|gb|EFR48921.1| polysulfide reductase chain B [Helicobacter canadensis MIT 98-5491] Length = 189 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C +C+HT CV VCP + E+ + I ++C+ C C CP +A Sbjct: 58 SCEMCEHTPCVTVCPTHASFMDEDGIVDIDANKCVGCLYCVVACPYNA 105 >gi|239627939|ref|ZP_04670970.1| fe-S cluster domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239518085|gb|EEQ57951.1| fe-S cluster domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 466 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C +C++ CP + +I+ CIDCG C CP A Sbjct: 15 CKGC--INCIKRCPTEAIRVRGGKASINNKFCIDCGECIRVCPHHA 58 >gi|223041744|ref|ZP_03611937.1| electron transport complex protein RnfB [Actinobacillus minor 202] gi|223017428|gb|EEF15846.1| electron transport complex protein RnfB [Actinobacillus minor 202] Length = 203 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + D C C +C CP + I+ Sbjct: 109 AFIHEDMCIGC--TKCIQACPVDAIIGTNKAMHTVIADLCTGCELCVAPCPTNCIE 162 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%) Query: 22 PVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 P E IH D CI C C CPVDAI Sbjct: 96 PAMEGEEAPEAKVAFIHEDMCIGCTKCIQACPVDAI 131 >gi|206576263|ref|YP_002237331.1| NADH-quinone oxidoreductase, I subunit [Klebsiella pneumoniae 342] gi|288934261|ref|YP_003438320.1| NADH-quinone oxidoreductase, chain I [Klebsiella variicola At-22] gi|290508464|ref|ZP_06547835.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. 1_1_55] gi|206565321|gb|ACI07097.1| NADH-quinone oxidoreductase, I subunit [Klebsiella pneumoniae 342] gi|288888990|gb|ADC57308.1| NADH-quinone oxidoreductase, chain I [Klebsiella variicola At-22] gi|289777858|gb|EFD85855.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. 1_1_55] Length = 180 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 KPDTEPGLELW 66 + + L + Sbjct: 115 QLTPDFELGEY 125 >gi|82523739|emb|CAI78739.1| predicted NADH:ubiquinone oxidoreductase, subunit RfnB [uncultured gamma proteobacterium] Length = 209 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA---IKP 57 ++ CI C T C++ CPVD + + EC C +C CPVD I P Sbjct: 115 AFIRENECIGC--TKCIQACPVDAILGAAKQMHTVIASECTGCDLCVEPCPVDCIDMIYP 172 Query: 58 DTEPGLELW 66 + W Sbjct: 173 EESLQTWHW 181 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAI 55 G I +ECI C C CPVDAI Sbjct: 109 TRGPAVAFIRENECIGCTKCIQACPVDAI 137 >gi|326390414|ref|ZP_08211972.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993532|gb|EGD51966.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter ethanolicus JW 200] Length = 577 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C C+ + CP + + +I PD+C C VC CP DAI+ Sbjct: 528 DKCKKCGL--CLRIGCP--AISKKDGIFSIDPDQCTGCTVCMQVCPFDAIE 574 >gi|291280075|ref|YP_003496910.1| molybdopterin oxidoreductase 4Fe-4S ferredoxin, iron-sulfur binding protein [Deferribacter desulfuricans SSM1] gi|290754777|dbj|BAI81154.1| molybdopterin oxidoreductase, 4Fe-4S ferredoxin, iron-sulfur binding protein [Deferribacter desulfuricans SSM1] Length = 185 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV VCP Y+ E+ + + ++CI C C CP DA Sbjct: 63 CQQCENPPCVHVCPTQASYQTEDGVVLVDHNKCILCKYCMTACPYDA 109 >gi|240102301|ref|YP_002958609.1| formate hydrogenlyase I subunit G (Mhy1G) [Thermococcus gammatolerans EJ3] gi|239909854|gb|ACS32745.1| formate hydrogenlyase I subunit G (Mhy1G) [Thermococcus gammatolerans EJ3] Length = 201 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-FYE-----GENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E CI C CV CP D E G L + CI C C CP A+ Sbjct: 47 PHINPEKCIGCG--ACVNACPPDALILEWDKEHGVKRLTFNAARCIRCHRCVEVCPTGAM 104 Query: 56 KP 57 +P Sbjct: 105 EP 106 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 17/30 (56%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+P++CI CG C CP DA+ + + Sbjct: 48 HINPEKCIGCGACVNACPPDALILEWDKEH 77 >gi|161502534|ref|YP_001569646.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863881|gb|ABX20504.1| hypothetical protein SARI_00578 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|323130652|gb|ADX18082.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326628528|gb|EGE34871.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 190 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 68 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 125 Query: 57 --PDTEPGL 63 PD E G Sbjct: 126 LTPDFELGE 134 >gi|297583775|ref|YP_003699555.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Bacillus selenitireducens MLS10] gi|297142232|gb|ADH98989.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Bacillus selenitireducens MLS10] Length = 179 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDA 54 +V C+ C CV+VC + E +A +PD+C C C CP DA Sbjct: 53 IVPVQCMHCDDAPCVKVCSTQATFKVEENGIVAFNPDKCTGCKACMAACPYDA 105 >gi|152971209|ref|YP_001336318.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895798|ref|YP_002920534.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae NTUH-K2044] gi|262043321|ref|ZP_06016450.1| NADH-quinone oxidoreductase subunit I [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330003563|ref|ZP_08304678.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. MS 92-3] gi|150956058|gb|ABR78088.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548116|dbj|BAH64467.1| NADH dehydrogenase subunit I [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039345|gb|EEW40487.1| NADH-quinone oxidoreductase subunit I [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536903|gb|EGF63202.1| NADH-quinone oxidoreductase subunit I [Klebsiella sp. MS 92-3] Length = 180 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 14/70 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 K--PDTEPGL 63 + PD E G Sbjct: 115 QLTPDFELGE 124 >gi|187927353|ref|YP_001897840.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Ralstonia pickettii 12J] gi|309779946|ref|ZP_07674700.1| ferredoxin [Ralstonia sp. 5_7_47FAA] gi|187724243|gb|ACD25408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ralstonia pickettii 12J] gi|308921305|gb|EFP66948.1| ferredoxin [Ralstonia sp. 5_7_47FAA] Length = 87 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|315054381|ref|XP_003176565.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS 118893] gi|311338411|gb|EFQ97613.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS 118893] Length = 227 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 126 ERCIACKL--CEAICPAQAITIEAEERVDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 183 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 184 ESP----------NAEYATETREELLYNKEKLLANGDKWE 213 >gi|288869823|ref|ZP_06111962.2| protein HymB [Clostridium hathewayi DSM 13479] gi|288869448|gb|EFD01747.1| protein HymB [Clostridium hathewayi DSM 13479] Length = 573 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ E C C T C CP + +N I ++C+ CG C +C AI Sbjct: 519 YIDPEKCKGC--TLCARNCPANAITGTVKNPHVIDGEKCLKCGACMEKCKFGAIY 571 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 I P++C C +C CP +AI Sbjct: 518 FYIDPEKCKGCTLCARNCPANAI 540 >gi|269839557|ref|YP_003324249.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269791287|gb|ACZ43427.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 205 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 9 CILCKH--TDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTE 60 C+ C+ C +VCPV + P CI C C CP K D E Sbjct: 54 CMHCEDPVAPCAQVCPVMAILITPEGVVQMADPSRCIACRNCVYACPFGVPKMDLE 109 >gi|218262922|ref|ZP_03477229.1| hypothetical protein PRABACTJOHN_02909 [Parabacteroides johnsonii DSM 18315] gi|218223064|gb|EEC95714.1| hypothetical protein PRABACTJOHN_02909 [Parabacteroides johnsonii DSM 18315] Length = 315 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 6/97 (6%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT-EPGLE 64 CI C C + CP + N I +C C C CP AI P E Sbjct: 216 ANACIGCG--KCAKECPFEAITVENNVAYIDYTKCRLCRKCVAVCPTGAIHELNFPPRKE 273 Query: 65 LWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 ++++ + K + P A + K E Sbjct: 274 AAPAVDAD---KVKPKVAPKPAAPKAEVLKTETPKVE 307 Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 13 KHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIK 56 + DCV C D + + D+C CG C CP + I+ Sbjct: 142 GYGDCVAACNFDAIHINLETGLPEVDEDKCTSCGACVKACPKNIIE 187 >gi|242013397|ref|XP_002427394.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, putative [Pediculus humanus corporis] gi|212511768|gb|EEB14656.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, putative [Pediculus humanus corporis] Length = 204 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 103 ERCIACKL--CEAICPAQAITIEAEERSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 159 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 144 CIYCGF--CQEACPVDAIVEGPNFEY 167 Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 103 ERCIACKLCEAICPAQAITIEAEE 126 >gi|205353207|ref|YP_002227008.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272988|emb|CAR37935.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628293|gb|EGE34636.1| thiosulfate reductase electron transport protein PhsB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 192 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C++ CV VCP Y EN + + CI C C CP Sbjct: 63 SCQHCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAGCPF 108 >gi|218296298|ref|ZP_03497054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] gi|218243370|gb|EED09900.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermus aquaticus Y51MC23] Length = 313 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENFLAIHP-DECIDCGVCEPECPVDAIKPDTE 60 V E C LC C VCP + EGE ++ + + C CG C CP I+ + Sbjct: 235 VEEGCTLC--PVCANVCPTEAVRRVREGEEYVLLLKVEACTGCGACVESCPPQVIRLEEA 292 Query: 61 PGLELWLKINSEYATQWP 78 P EL ++ E P Sbjct: 293 PKEELHQEV--ELFRGKP 308 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C +VCP + + C CG+C CP A++ E + Sbjct: 39 CYQVCPRGAVRLEGWRVELDEVLCTGCGLCTGVCPGVALEYPLGAIQEALI 89 >gi|150398828|ref|YP_001322595.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150011531|gb|ABR53983.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 397 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VVT+ C+ C CV CPV + CI C +C CP +AI Sbjct: 130 VVTDTCVGCG--ICVPECPVASISLENEKAVVDKKSCIYCSICAQTCPWNAIF 180 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E CI C C + CP + ++ +AI P C CG+C CPVDA+ E G Sbjct: 198 VDDELCIGCGD--CTDKCPRNLIVV-KDMVAIPPKGCPACGLCVSTCPVDAVDLKVEYGQ 254 Query: 64 EL 65 Sbjct: 255 AK 256 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVD------CFYEGENFLAIHP------DECIDCGVCEPECPVDAIK 56 C+ C T CV++CP D + I D C+ CG+C PECPV +I Sbjct: 94 CVGC--TKCVDICPDDYVGMEGIIEPAKRNFVIPKEPIVVTDTCVGCGICVPECPVASIS 151 Query: 57 PDTE 60 + E Sbjct: 152 LENE 155 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVD 53 CI C CV++CP G+ + + P C +CG C CP D Sbjct: 310 CIRCG--ACVQICPTGALRLGKINHKGKDYDRIEFSPSLCNNCGKCIETCPYD 360 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 12/66 (18%) Query: 9 CILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV CPVD + ++C+ CG C +CP AI Sbjct: 231 CPACGL--CVSTCPVDAVDLKVEYGQAKPATSEGIIWDEEKCVYCGPCAIKCPNKAIAVV 288 Query: 59 TEPGLE 64 GLE Sbjct: 289 NPKGLE 294 >gi|157962637|ref|YP_001502671.1| dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] gi|157847637|gb|ABV88136.1| Dimethylsulfoxide reductase chain B [Shewanella pealeana ATCC 700345] Length = 221 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + D CI C C CP DA + D Sbjct: 78 AYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAQDLCIGCESCARACPYDAPQIDR 137 Query: 60 E 60 E Sbjct: 138 E 138 >gi|73667819|ref|YP_303834.1| hypothetical protein Mbar_A0270 [Methanosarcina barkeri str. Fusaro] gi|72394981|gb|AAZ69254.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 377 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T NC LCK CV C E L I+ ++CI C C CP DA++ Sbjct: 314 TSNCALCK--ACVSNCSAHAIEEINRTLKINEEKCIHCYCCRELCPNDAVE 362 >gi|21227754|ref|NP_633676.1| ferredoxin [Methanosarcina mazei Go1] gi|20906156|gb|AAM31348.1| Ferredoxin [Methanosarcina mazei Go1] Length = 59 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E C C CV+ CPV+ E E + DEC+DCG CE CP+ AIK + Sbjct: 5 VNKEECTGCG--TCVDECPVEAIIIDEDEGCAVVDEDECVDCGACEDVCPIGAIKVE 59 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ +EC CG C ECPV+AI D + G Sbjct: 5 VNKEECTGCGTCVDECPVEAIIIDEDEG 32 >gi|148261628|ref|YP_001235755.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|146403309|gb|ABQ31836.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] Length = 247 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C++ CV VCP + E+ + ++ D CI C +C CP A + D G Sbjct: 83 SCLHCENPLCVTVCPTGASYKRAEDGIVLVNTDICIGCKLCSWACPYGAREFDEHDG 139 >gi|126175400|ref|YP_001051549.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|153001705|ref|YP_001367386.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|160876443|ref|YP_001555759.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS195] gi|217972359|ref|YP_002357110.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS223] gi|304410225|ref|ZP_07391844.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|307302064|ref|ZP_07581822.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|125998605|gb|ABN62680.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] gi|151366323|gb|ABS09323.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] gi|160861965|gb|ABX50499.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS195] gi|217497494|gb|ACK45687.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS223] gi|304351634|gb|EFM16033.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS183] gi|306914102|gb|EFN44523.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica BA175] gi|315268633|gb|ADT95486.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS678] Length = 83 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALLIDDSCINCD--MCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTK 83 I PD ++ N E ++ +T K Sbjct: 59 IDPD-----PNRVESNDELLVKFAVLTQK 82 >gi|226942509|ref|YP_002797582.1| 4Fe-4S ferredoxin [Azotobacter vinelandii DJ] gi|226717436|gb|ACO76607.1| 4Fe-4S ferredoxin [Azotobacter vinelandii DJ] Length = 83 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I + C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDSNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTK 83 I P E ++ E ++ IT K Sbjct: 59 I-----PHDENRVESREELMRKYLIITGK 82 >gi|332029694|gb|EGI69573.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Acromyrmex echinatior] Length = 197 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 96 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMSKCIYCGFCQEACPVDAI 152 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 96 ERCIACKLCEAICPAQAITIEAEERAD 122 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 137 CIYCGF--CQEACPVDAIVEGPNF 158 >gi|330812393|ref|YP_004356855.1| ferredoxin [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380501|gb|AEA71851.1| putative ferredoxin [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 83 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP + +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IPLDEAHPE 67 >gi|327308414|ref|XP_003238898.1| ferredoxin-like iron-sulfur protein [Trichophyton rubrum CBS 118892] gi|326459154|gb|EGD84607.1| ferredoxin-like iron-sulfur protein [Trichophyton rubrum CBS 118892] Length = 227 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 126 ERCIACKL--CEAICPAQAITIEAEERVDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 183 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 184 ESP----------NAEYATETREELLYNKEKLLANGDKWE 213 >gi|332162149|ref|YP_004298726.1| Fe-S-cluster-containing hydrogenase components 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606201|emb|CBY27699.1| nrfc protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325666379|gb|ADZ43023.1| Fe-S-cluster-containing hydrogenase components 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864043|emb|CBX74121.1| protein nrfC [Yersinia enterocolitica W22703] Length = 223 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPV 52 +C C CV+VCP Y + ++PD C+ C C CP Sbjct: 91 SCQHCDKAPCVDVCPTGASYRDKATGIVDVNPDLCVGCQYCIAACPY 137 >gi|308273558|emb|CBX30160.1| hypothetical protein N47_D29690 [uncultured Desulfobacterium sp.] Length = 168 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 C C+ C+ C ++ + + D+CI C C CP I Sbjct: 63 CRHCEDAPCMHACISGAIIRTQDGVVLTDKDKCIGCWTCVMVCPYGVI 110 >gi|302339324|ref|YP_003804530.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Spirochaeta smaragdinae DSM 11293] gi|301636509|gb|ADK81936.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Spirochaeta smaragdinae DSM 11293] Length = 552 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 3/43 (6%) Query: 16 DCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAI 55 C+ CPV + I D C CG C CP AI Sbjct: 428 PCISACPVGAITMTPSLTGIPRLDSDLCTGCGRCLSVCPGQAI 470 >gi|255523131|ref|ZP_05390103.1| nitroreductase [Clostridium carboxidivorans P7] gi|255513246|gb|EET89514.1| nitroreductase [Clostridium carboxidivorans P7] Length = 266 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V C+ C C +VCP Y E+ + + CI CG C CP A Sbjct: 6 VNESLCVKCG--ACTKVCPTTALYMKEDGPKNNNNSCIACGQCAAVCPCGA 54 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 14/32 (43%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 N + ++ C+ CG C CP A+ + Sbjct: 2 NLIKVNESLCVKCGACTKVCPTTALYMKEDGP 33 >gi|255019915|ref|ZP_05291990.1| NADH-ubiquinone oxidoreductase chain I [Acidithiobacillus caldus ATCC 51756] gi|254970695|gb|EET28182.1| NADH-ubiquinone oxidoreductase chain I [Acidithiobacillus caldus ATCC 51756] Length = 163 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP GE I +CI CG+CE CPVD+I Sbjct: 62 ERCISCKL--CEAVCPALAITIRGEERADGTRRTTAYDIDLSKCIFCGLCEESCPVDSI 118 >gi|302879566|ref|YP_003848130.1| electron transport complex, RnfABCDGE type, B subunit [Gallionella capsiferriformans ES-2] gi|302582355|gb|ADL56366.1| electron transport complex, RnfABCDGE type, B subunit [Gallionella capsiferriformans ES-2] Length = 182 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 CI C T C++ CPVD + I EC C +C CPVD I + P Sbjct: 112 CIGC--TLCIQACPVDAIVGAAKQMHTIIAAECTGCELCLAPCPVDCISMEPIPD 164 Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 107 IDESTCIGCTLCIQACPVDAI 127 >gi|258405352|ref|YP_003198094.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797579|gb|ACV68516.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 189 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHP-DECIDCGVCEPECPVDAIKP 57 C C++ C+ VCPV +Y E+ + +H D+CI CG C CP A + Sbjct: 58 ACNHCENPTCLNVCPVKAYYKREEDGIVVHEQDKCIGCGNCIRSCPYGAPRY 109 >gi|218779474|ref|YP_002430792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760858|gb|ACL03324.1| Putative uncharacterized protein(contains glutamate synthase domain and a partial HdrA domain) [Desulfatibacillum alkenivorans AK-01] Length = 1115 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 9/70 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL-----AIHPDECIDCGVCEPECPVDAIKPD 58 V + C C CV VCP +N + + C CG C CP +A D Sbjct: 1043 VDADRCRGCG--SCVAVCPYQAIGLKQNTVGGWYAFVDEALCKGCGNCISVCPNNA--AD 1098 Query: 59 TEPGLELWLK 68 + + +L+ Sbjct: 1099 SPYRNQKYLE 1108 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 10/20 (50%) Query: 34 AIHPDECIDCGVCEPECPVD 53 + P+ C CG C CPV Sbjct: 105 YVDPERCTLCGKCVEACPVT 124 >gi|160879922|ref|YP_001558890.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium phytofermentans ISDg] gi|160428588|gb|ABX42151.1| nitrite and sulphite reductase 4Fe-4S region [Clostridium phytofermentans ISDg] Length = 317 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++C CK VE CP+ ++ L++ D C +CG C +C D I+ Sbjct: 172 DSCNSCKKCSVVESCPMSAATLEDDVLSLDKDACNNCGRCVGKCHFDCIED 222 >gi|91202885|emb|CAJ72524.1| strongly similar to membrane-bound [NiFe]-hydrogenase-3, small subunit (chain G) [Candidatus Kuenenia stuttgartiensis] Length = 262 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +E C C CVE CP + + +G+ +L + +C+ CG+CE CP AI+ Sbjct: 37 SEKCKACNV--CVETCPTNAYTWIEEQGKRYLQLSHAKCVFCGMCEEVCPYKAIR 89 >gi|46578589|ref|YP_009397.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603833|ref|YP_968233.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio vulgaris DP4] gi|46448000|gb|AAS94656.1| iron-sulfur cluster-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564062|gb|ABM29806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfovibrio vulgaris DP4] gi|311232514|gb|ADP85368.1| hypothetical protein Deval_0197 [Desulfovibrio vulgaris RCH1] Length = 333 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECP 51 C C CV VCP E + +AI D C+ C C CP Sbjct: 58 PCFQCDEPWCVPVCPTGAIAKRESDGIVAIDADTCVGCKACITACP 103 >gi|323474197|gb|ADX84803.1| thiamine pyrophosphate protein domain protein TPP-binding protein [Sulfolobus islandicus REY15A] Length = 612 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 4/64 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGL- 63 E C C CP + I CI CG C P CP AI K D Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAISLKGDKPEKWD 607 Query: 64 ELWL 67 ELWL Sbjct: 608 ELWL 611 >gi|300717644|ref|YP_003742447.1| NADH dehydrogenase I chain I [Erwinia billingiae Eb661] gi|299063480|emb|CAX60600.1| NADH dehydrogenase I chain I [Erwinia billingiae Eb661] Length = 180 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|289523594|ref|ZP_06440448.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503286|gb|EFD24450.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 619 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E C+ CK C+ CP F E + C+ CGVC CP AI+ +E G Sbjct: 563 ETCVGCKF--CINFFNCPGLVFDESSKKAYVDERFCVKCGVCVNVCPHGAIQVISEEG 618 >gi|283853443|ref|ZP_06370687.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfovibrio sp. FW1012B] gi|283571163|gb|EFC19179.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfovibrio sp. FW1012B] Length = 776 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Query: 8 NCILCKHTDCVEVCPVDCFY----EGENF-LAIHPDECIDCGVCEPECP 51 C C C +CP EG+ F + P++CI CG C CP Sbjct: 717 ACRDCGL--CETICPTGAISRRQGEGKEFEMVSDPEKCIGCGFCGNACP 763 Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 11/17 (64%) Query: 39 ECIDCGVCEPECPVDAI 55 C DCG+CE CP AI Sbjct: 717 ACRDCGLCETICPTGAI 733 >gi|213425327|ref|ZP_03358077.1| putative polyferredoxin [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 281 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 5 VTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VT+ C+ + C +VCP F + ++I CI CG C CPVDAI Sbjct: 12 VTQACVRRRFRFSSCRACTDVCPAQVFSLAQGQVSIDTTRCIACGDCLFVCPVDAI 67 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 + C +C C CP + ++ L I C CG C CP A ++ D EP Sbjct: 191 QECRMCG--ACWRSCPENVIQFDDDTLTIAAARCTGCGGCAAVCPHQALRLRFDVEPA 246 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I P EC CG C CP + I+ D + Sbjct: 187 EISPQECRMCGACWRSCPENVIQFDDD 213 >gi|218961952|ref|YP_001741727.1| [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta (hymB-like); putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730609|emb|CAO81521.1| [Fe] hydrogenase (Fe-only hydrogenase) (ferredoxin bidirectional hydrogenase), subunit beta (hymB-like); putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 589 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 E C+ C T C CPV C + I +CI CG C+ C +A+ + Sbjct: 539 EKCVGC--TLCARKCPVSCISGRTKQVHKIDQSKCIKCGACQNVCKFNAVIKE 589 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I+P++C+ C +C +CPV I Sbjct: 533 QYKINPEKCVGCTLCARKCPVSCI 556 >gi|167770888|ref|ZP_02442941.1| hypothetical protein ANACOL_02241 [Anaerotruncus colihominis DSM 17241] gi|167666928|gb|EDS11058.1| hypothetical protein ANACOL_02241 [Anaerotruncus colihominis DSM 17241] Length = 437 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C +CV+ CP + I + CIDCG C CP A Sbjct: 15 DKCHGC--INCVKRCPTEAIRVRGGKAKIIKERCIDCGECIRVCPHHA 60 >gi|220917060|ref|YP_002492364.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954914|gb|ACL65298.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 300 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C C CPV + + +P+ C+ C C CP D K + Sbjct: 104 CMHCLAPGCASACPVKAMSKSPEGPVVYNPNRCMGCRYCMIACPFDVPKYE 154 >gi|150007436|ref|YP_001302179.1| pyruvate-formate lyase-activating enzyme [Parabacteroides distasonis ATCC 8503] gi|149935860|gb|ABR42557.1| pyruvate-formate lyase-activating enzyme [Parabacteroides distasonis ATCC 8503] Length = 301 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+VCP E + C CG C CP A++ Sbjct: 52 CIGCG--ACVDVCPTGALTLTEAGIVTDRSLCRTCGRCAEVCPTLAME 97 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C L +CI CG C CP A Sbjct: 26 CPLACVWCHNPEGISPRAEKLYTRK-KCIGCGACVDVCPTGA 66 >gi|146303119|ref|YP_001190435.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701369|gb|ABP94511.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Metallosphaera sedula DSM 5348] Length = 87 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E C C CV+VCP + + + +H + C++CG CP AI G Sbjct: 22 VNLEVCRTCAEKPCVKVCPAGTYERSGDVIEVHYERCLECGAALVACPFGAISFKFPEG 80 >gi|157370480|ref|YP_001478469.1| electron transport complex protein RnfB [Serratia proteamaculans 568] gi|166991045|sp|A8GE01|RNFB_SERP5 RecName: Full=Electron transport complex protein rnfB gi|157322244|gb|ABV41341.1| electron transport complex, RnfABCDGE type, B subunit [Serratia proteamaculans 568] Length = 190 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 108 AYIDEANCIGC--TKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE 161 >gi|23014678|ref|ZP_00054482.1| COG1140: Nitrate reductase beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 288 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + + C C C++ CP Y+ E+ + I D+C C CP D I ++ Sbjct: 102 FYLARPCNHCTDPACLKACPTRSIYKNEDGIVLIDQDKCEGFQYCVRACPYDKIYYNS 159 >gi|325959023|ref|YP_004290489.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325330455|gb|ADZ09517.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 342 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 3 YVVTE-NCILCKHTDCVEVCPV-DCFYEGENFLAIHPDECIDCGVCEPECPV-DAIK 56 +V+ + CI CK C++ C V D +E +N + I +CI CG C CPV AIK Sbjct: 125 FVIDDYLCIRCK--KCMKTCKVGDAIFEEDNKIVIDQSKCISCGECLKTCPVKGAIK 179 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 4 VVT---ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+T + C C CV+ CP Y E + +PD+C+ C +C CP AI Sbjct: 258 VITWDKDKCTNC--RLCVKECPSGAIKYTSEEGVVRNPDKCLRCSICYQTCPFGAI 311 Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 19/69 (27%) Query: 9 CILCKHTDCVEVCPVDC----------------FYEGENFLAIHPDECIDCGVCEPECPV 52 CI C C EVCP D + I CI C C C V Sbjct: 87 CIRCGF--CAEVCPTDPKTLTCGENHLIREDFTILPVDKKFVIDDYLCIRCKKCMKTCKV 144 Query: 53 -DAIKPDTE 60 DAI + Sbjct: 145 GDAIFEEDN 153 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 13/58 (22%) Query: 7 ENCILCKHTDCVEVCP--------VDCFYEGENFL---AIHPDECIDCGVCEPECPVD 53 E CI C C CP D E E+ I+ CI CG C CP D Sbjct: 45 EYCIACG--ACTAACPAPMAIKLVRDEDSEHEDGFTYPVINNRGCIRCGFCAEVCPTD 100 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPG 62 D+C +C +C ECP AIK +E G Sbjct: 262 DKDKCTNCRLCVKECPSGAIKYTSEEG 288 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 23 VDCFYEGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGLEL 65 +D NF +H + CI CG C CP AIK + E Sbjct: 30 MDAPDRFRNFPEVHKEYCIACGACTAACPAPMAIKLVRDEDSEH 73 >gi|332162382|ref|YP_004298959.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606461|emb|CBY27959.1| NADH-ubiquinone oxidoreductase chain I [Yersinia enterocolitica subsp. palearctica Y11] gi|325666612|gb|ADZ43256.1| NADH dehydrogenase subunit I [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 180 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|315634427|ref|ZP_07889714.1| electron transport complex protein RnfB [Aggregatibacter segnis ATCC 33393] gi|315477017|gb|EFU67762.1| electron transport complex protein RnfB [Aggregatibacter segnis ATCC 33393] Length = 197 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I PD C C +C CP I Sbjct: 107 AFIDENMCIGC--TKCIQACPVDAIIGSNKLMHTIIPDLCTGCELCVEPCPTSCI 159 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 12/28 (42%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 102 PTPKVAFIDENMCIGCTKCIQACPVDAI 129 >gi|311900215|dbj|BAJ32623.1| putative iron-sulfur binding protein [Kitasatospora setae KM-6054] Length = 205 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 9 CILCKH--TDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C+ C EVCP + + + P CI C C CP K D E L+ Sbjct: 53 CMHCEDPVAPCAEVCPAEAILITADGVVQEADPTRCIGCANCVNACPFGVPKIDLEAKLQ 112 >gi|332654598|ref|ZP_08420341.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ruminococcaceae bacterium D16] gi|332516562|gb|EGJ46168.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ruminococcaceae bacterium D16] Length = 579 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V + CI CK C+++ CP EG + C+ CGVCE CPV A Sbjct: 524 VNKDKCIGCK--SCMKIGCPAISIKEG--KAWVDNTLCVGCGVCEQLCPVGA 571 >gi|294494819|ref|YP_003541312.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] gi|292665818|gb|ADE35667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] Length = 58 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C+ C CV+ CP + EN + +EC+DCGVC CP +AI + Sbjct: 8 DECVGCG--ACVDECPSEAISMNDENIAVVDAEECVDCGVCVDVCPTEAITME 58 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTE 60 I+ DEC+ CG C ECP +AI + E Sbjct: 4 VINVDECVGCGACVDECPSEAISMNDE 30 >gi|293376708|ref|ZP_06622931.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] gi|292644665|gb|EFF62752.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] Length = 424 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C T C+ VCP + + + ++C++CG C C V A Sbjct: 13 DDCIGC--TRCMRVCPTEAIRIVNGKVKLIEEKCVNCGACFTTCHVHA 58 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D+CI C C CP +AI+ Sbjct: 10 INFDDCIGCTRCMRVCPTEAIR 31 >gi|293406384|ref|ZP_06650310.1| oxidoreductase [Escherichia coli FVEC1412] gi|298382120|ref|ZP_06991717.1| oxidoreductase [Escherichia coli FVEC1302] gi|291426390|gb|EFE99422.1| oxidoreductase [Escherichia coli FVEC1412] gi|298277260|gb|EFI18776.1| oxidoreductase [Escherichia coli FVEC1302] Length = 163 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|284162170|ref|YP_003400793.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Archaeoglobus profundus DSM 5631] gi|284012167|gb|ADB58120.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Archaeoglobus profundus DSM 5631] Length = 655 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 YV E C C C+ +CP E A I C+ CGVC CP AIK Sbjct: 584 AYVDEEKCSGCG--ICIPLCPFQAIEIDERKRAKIDELLCMGCGVCASSCPSRAIKHRLF 641 Query: 61 PGLELWLKI 69 + +I Sbjct: 642 ESETIRAEI 650 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 16/35 (45%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + ++C CG+C P CP AI+ D + Sbjct: 581 PTTAYVDEEKCSGCGICIPLCPFQAIEIDERKRAK 615 >gi|281354947|ref|ZP_06241441.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] gi|281317827|gb|EFB01847.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] Length = 56 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V T+ C C+ CV CPV + ++ +CI+CG C ECP +AI Sbjct: 5 VNTDACSGCE--TCVGSCPVSAISMADGKAVVNEADCIECGACVGECPCEAI 54 >gi|269104124|ref|ZP_06156820.1| electron transport protein hydN [Photobacterium damselae subsp. damselae CIP 102761] gi|268160764|gb|EEZ39261.1| electron transport protein hydN [Photobacterium damselae subsp. damselae CIP 102761] Length = 181 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V T C C C +VCP + + F+ + CI C C CP A Sbjct: 50 AHVTTPVMCRQCDDAPCAQVCPNNAIVLEDGFVKVIQSRCIGCKTCVIACPYGA 103 >gi|218779495|ref|YP_002430813.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218760879|gb|ACL03345.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 361 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 ++ C C+ C++ CP G++ + + D C C C CPV+AI ++PG Sbjct: 284 SDLCTACE--TCIDRCPPQALSMGDDDVPEVDLDLCFGCAACATGCPVEAISMVSKPGF 340 >gi|83590255|ref|YP_430264.1| cobyrinic acid a,c-diamide synthase [Moorella thermoacetica ATCC 39073] gi|83573169|gb|ABC19721.1| Cobyrinic acid a,c-diamide synthase [Moorella thermoacetica ATCC 39073] Length = 287 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C C+EVC + E L ++P C CG C+ CP AI + ++ Sbjct: 68 CTGCG--RCLEVCRYEAIKE----LRVNPVFCEGCGACKLACPSGAITMEPNLAGYWYI 120 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 12/29 (41%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAIKP 57 G N I C CG C C +AIK Sbjct: 57 GSNKAVIDAGICTGCGRCLEVCRYEAIKE 85 >gi|125776379|ref|XP_001359257.1| GA17794 [Drosophila pseudoobscura pseudoobscura] gi|195152209|ref|XP_002017029.1| GL21733 [Drosophila persimilis] gi|54639000|gb|EAL28402.1| GA17794 [Drosophila pseudoobscura pseudoobscura] gi|194112086|gb|EDW34129.1| GL21733 [Drosophila persimilis] Length = 217 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 36.7 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEERAD 142 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|326381404|ref|ZP_08203098.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199651|gb|EGD56831.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 336 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP E + + D C CG C CP ++ Sbjct: 132 SDVCKHCTHAGCLDVCPTGAMMRTEFGTVVVQADICNGCGTCVAGCPFGVVE 183 >gi|317489693|ref|ZP_07948197.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325830228|ref|ZP_08163685.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|316911287|gb|EFV32892.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325487695|gb|EGC90133.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 204 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C C E CP + + ++I ++CI CG C CP +A K D Sbjct: 60 SYPLSMSCNHCDSPVCFEKCPQSAIIKDADTGLMSIDEEKCIGCGTCAIVCPYNAPKVDE 119 Query: 60 E 60 E Sbjct: 120 E 120 >gi|237808209|ref|YP_002892649.1| electron transport complex, RnfABCDGE type, B subunit [Tolumonas auensis DSM 9187] gi|259494048|sp|C4LEP6|RNFB_TOLAT RecName: Full=Electron transport complex protein rnfB gi|237500470|gb|ACQ93063.1| electron transport complex, RnfABCDGE type, B subunit [Tolumonas auensis DSM 9187] Length = 185 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 7/72 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK---- 56 ++ CI C T C++ CPVD + I EC C +C CP + I+ Sbjct: 108 AFIHENLCIGC--TKCIQACPVDAIIGAPKLMHTILRSECTGCDLCVDPCPTNCIEMIEL 165 Query: 57 PDTEPGLELWLK 68 P T + ++ Sbjct: 166 PATPDRWKWDVE 177 >gi|169335113|ref|ZP_02862306.1| hypothetical protein ANASTE_01520 [Anaerofustis stercorihominis DSM 17244] gi|169257851|gb|EDS71817.1| hypothetical protein ANASTE_01520 [Anaerofustis stercorihominis DSM 17244] Length = 273 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V C CK C EVCP+ + + CI CG C +CP++A D E L Sbjct: 200 VNHRCNDCKL--CAEVCPMGSIDKDDIRKY--NGICIKCGACIKKCPMNARYYDDEGYLY 255 Query: 65 LWLKINSEYATQ 76 ++ YA + Sbjct: 256 HKKELEEMYARR 267 >gi|169633144|ref|YP_001706880.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii SDF] gi|169151936|emb|CAP00792.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCD--MCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IK D Sbjct: 59 IKQD 62 >gi|163814469|ref|ZP_02205858.1| hypothetical protein COPEUT_00620 [Coprococcus eutactus ATCC 27759] gi|158450104|gb|EDP27099.1| hypothetical protein COPEUT_00620 [Coprococcus eutactus ATCC 27759] Length = 286 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +CI+C CV+ C + + + D+C CG C CP DA Sbjct: 164 SCIMCGV--CVKACREGAITMADGKIILDTDKCNYCGRCAKACPTDA 208 >gi|157373490|ref|YP_001472090.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157315864|gb|ABV34962.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 211 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + D CI C C CP DA + D Sbjct: 63 AYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAADLCIGCESCARACPYDAPQIDK 122 Query: 60 E 60 + Sbjct: 123 D 123 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 13/62 (20%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC---------GVCEPECPVD 53 +V + CI C+ C CP D ++ + +C C C CP+ Sbjct: 97 HVAADLCIGCE--SCARACPYDAPQIDKDRKVM--TKCDGCYERLAEGKQPSCVESCPMR 152 Query: 54 AI 55 AI Sbjct: 153 AI 154 >gi|78062849|ref|YP_372757.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] gi|77970734|gb|ABB12113.1| 4Fe-4S ferredoxin [Burkholderia sp. 383] Length = 248 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|45359026|ref|NP_988583.1| polyferredoxin [Methanococcus maripaludis S2] gi|45047901|emb|CAF31019.1| polyferredoxin [Methanococcus maripaludis S2] Length = 393 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 17/70 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENF---------------LAIHPDECIDCGV 45 M +CI C +CVE CP + G L I + C+ CG Sbjct: 76 MPVFDAGSCINCG--NCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGT 133 Query: 46 CEPECPVDAI 55 CE CPVDAI Sbjct: 134 CENACPVDAI 143 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD-AIKPDTEPGLE 64 E C+ C C CPVD L I + C+ C C CPV+ AI +EP L Sbjct: 126 EVCVSCG--TCENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELS 183 Query: 65 LWLKI 69 ++I Sbjct: 184 EKIEI 188 Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 3 YVVTEN-CILCKHTDCVEVCPV-DCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y+V E CI C C C V + + N I+P+ C+ CG+C+ CPVDAI Sbjct: 276 YIVDEEKCIGC--RICYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVDAI 330 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 8/56 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C + C E CP D + CI+CG C CP + ++ Sbjct: 47 EKCISC--SACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLE 100 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V CI C +CV+VCP E CI G C CP AI+ Sbjct: 216 IVPSLCIGCG--NCVDVCPGSIDLERLKVT-----SCIKSGKCLEVCPTTAIRIGVPE 266 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPGLEL 65 P++CI C C+ CP DAI + + Sbjct: 46 PEKCISCSACKESCPSDAISMEFNEEFKK 74 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 12/58 (20%) Query: 8 NCILCKHTDCVEVCPVDCFYEG---------ENFLAIHPDECIDCGVCEPECPV-DAI 55 +CI K C+EVCP G + ++CI C +C C V +AI Sbjct: 244 SCI--KSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYRSCNVPEAI 299 >gi|328952636|ref|YP_004369970.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfobacca acetoxidans DSM 11109] gi|328452960|gb|AEB08789.1| methyl-viologen-reducing hydrogenase delta subunit [Desulfobacca acetoxidans DSM 11109] Length = 780 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 12/73 (16%) Query: 5 VTENCILCKHTDCVEVCPVD----------CFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V C LC C VCPV + I ++C CG C CP +A Sbjct: 242 VGATCNLCGQ--CAAVCPVQINDHAAIYLPSPHAFPTGYVIDSEQCTRCGACLEVCPQEA 299 Query: 55 IKPDTEPGLELWL 67 I ++ P L + Sbjct: 300 ITLESGPTLYTFT 312 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C CK C + CP EGE + C CGVC CP +A+ Sbjct: 569 EKCTGCK--RCFQQCPFQAIELYDREGETKARVIVAACKGCGVCAGACPAEAV 619 Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P++C C C +CP AI+ G Sbjct: 565 EIDPEKCTGCKRCFQQCPFQAIELYDREGE 594 >gi|325845197|ref|ZP_08168505.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] gi|325488793|gb|EGC91194.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] Length = 424 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C T C+ VCP + + + ++C++CG C C V A Sbjct: 13 DDCIGC--TRCMRVCPTEAIRIVNGKVKLIEEKCVNCGACFTTCHVHA 58 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D+CI C C CP +AI+ Sbjct: 10 INFDDCIGCTRCMRVCPTEAIR 31 >gi|294789158|ref|ZP_06754397.1| ferredoxin [Simonsiella muelleri ATCC 29453] gi|294482899|gb|EFG30587.1| ferredoxin [Simonsiella muelleri ATCC 29453] Length = 83 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C CP D +GE I+P+ C C C+ CPVD Sbjct: 1 MSLFITDECINCDV--CEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D Sbjct: 59 ILIDETHPETQ 69 >gi|294102539|ref|YP_003554397.1| NADH dehydrogenase (quinone) [Aminobacterium colombiense DSM 12261] gi|293617519|gb|ADE57673.1| NADH dehydrogenase (quinone) [Aminobacterium colombiense DSM 12261] Length = 597 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 + C C C CPV C G+ I + CI CG C +CP AI Sbjct: 547 DLCKRCGL--CARNCPVHCI-PGDRASGYTIDTERCIRCGTCFEKCPFGAI 594 Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 7/49 (14%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 K C VC E +I D C CG+C CPV I D Sbjct: 525 HVKDKKCPAGVC--SALIE----YSIDQDLCKRCGLCARNCPVHCIPGD 567 >gi|284162651|ref|YP_003401274.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] gi|294862439|sp|P84626|HDLA_ARCPA RecName: Full=Heterodisulfide reductase subunit A-like protein gi|284012648|gb|ADB58601.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Archaeoglobus profundus DSM 5631] Length = 701 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 E C C CV +CP + I+P C CGVC CP AIK Sbjct: 625 EKCSGCG--ICVPLCPYGAITMTKYNESMRAEINPALCKGCGVCAAACPSKAIK 676 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 26/92 (28%), Gaps = 41/92 (44%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEG---------------ENFLAIHPDECI 41 T+V + C C C +VCP F EG I D CI Sbjct: 241 TWVDWDLCTGCG--ACTDVCPPKARVPDEFNEGLSKRGAIYIQFPQAVPKKAVIDIDACI 298 Query: 42 DCGV-------------------CEPECPVDA 54 +CG CE CP A Sbjct: 299 ECGGRKFGTEPRKTKDGKPILAPCEKVCPTGA 330 Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKES 86 + ++C CG+C P CP AI T+ + +IN S Sbjct: 621 EVDKEKCSGCGICVPLCPYGAITM-TKYNESMRAEINPALCKGCGVCAAACPS 672 >gi|224368544|ref|YP_002602707.1| HdrA3' [Desulfobacterium autotrophicum HRM2] gi|223691260|gb|ACN14543.1| HdrA3' [Desulfobacterium autotrophicum HRM2] Length = 608 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC----FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C C +CV CP + G ++P C CG C CP ++I+ Sbjct: 508 ARVNADRCSGCG--NCVAACPFEACRLEPGNGRYHCRVNPFRCTGCGTCVAVCPNNSIQ 564 >gi|254780861|ref|YP_003065274.1| NADH dehydrogenase subunit I [Candidatus Liberibacter asiaticus str. psy62] gi|254040538|gb|ACT57334.1| NADH dehydrogenase subunit I [Candidatus Liberibacter asiaticus str. psy62] Length = 163 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 19/79 (24%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP ++G I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAI 118 Query: 56 ------KPDTEPGLELWLK 68 + TE EL+ Sbjct: 119 VEGPNFEFATETRQELYYD 137 >gi|154148996|ref|YP_001406324.1| ferredoxin [Campylobacter hominis ATCC BAA-381] gi|153805005|gb|ABS52012.1| ferredoxin [Campylobacter hominis ATCC BAA-381] Length = 82 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C + CPV YE E I PD C +C C ECPV+ Sbjct: 1 MSLMITKDCICCD--ACKDECPVGAIYEDEPIYVIDPDLCCECVNDYSEPACIVECPVEC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|167039598|ref|YP_001662583.1| thiamine pyrophosphate binding domain-containing protein [Thermoanaerobacter sp. X514] gi|256751499|ref|ZP_05492376.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|300915152|ref|ZP_07132467.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter sp. X561] gi|307725076|ref|YP_003904827.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Thermoanaerobacter sp. X513] gi|166853838|gb|ABY92247.1| thiamine pyrophosphate enzyme domain protein TPP-binding [Thermoanaerobacter sp. X514] gi|256749583|gb|EEU62610.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|300888876|gb|EFK84023.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter sp. X561] gi|307582137|gb|ADN55536.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter sp. X513] Length = 577 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C C+ + CP + + +I PD+C C VC CP DAI+ Sbjct: 528 DKCKKCGL--CLRIGCP--AISKKDGIFSIDPDQCTGCTVCMQVCPFDAIE 574 >gi|148264461|ref|YP_001231167.1| electron transfer flavoprotein, alpha subunit [Geobacter uraniireducens Rf4] gi|146397961|gb|ABQ26594.1| electron transfer flavoprotein, alpha subunit [Geobacter uraniireducens Rf4] Length = 441 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 13/102 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + CI C C CPVD + I +CI C C CP A++ P Sbjct: 17 IEGKCIACGAR-CQSSCPVDGIEMNAQGEPEIELSKCIGCVKCVKACPGKALEIFYTPEE 75 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFS 105 L+I + A Q +LP +G KQ+ E S Sbjct: 76 ---LEILAALAAQ--------GNLPDEEVDEGEKQRRELLAS 106 >gi|319779206|ref|YP_004130119.1| NADH-ubiquinone oxidoreductase chain I [Taylorella equigenitalis MCE9] gi|317109230|gb|ADU91976.1| NADH-ubiquinone oxidoreductase chain I [Taylorella equigenitalis MCE9] Length = 161 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +E E+ I +CI CG CE CPV+AI Sbjct: 60 ERCIACKL--CEAVCPAMAITIESHEREDGARKTSRYDIDLTKCIFCGFCEESCPVEAI 116 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++ + Sbjct: 60 ERCIACKLCEAVCPAMAITIESHERED 86 >gi|294101675|ref|YP_003553533.1| Fe-S cluster domain protein [Aminobacterium colombiense DSM 12261] gi|293616655|gb|ADE56809.1| Fe-S cluster domain protein [Aminobacterium colombiense DSM 12261] Length = 432 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C +C++ CP + + I D CIDCG C +C AI + + Sbjct: 12 CRGC--ANCIKTCPTEAMRVLTGCVHIISDLCIDCGECIRKCKEKAIILNEDE 62 >gi|226487082|emb|CAX75406.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Schistosoma japonicum] gi|226487084|emb|CAX75407.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Schistosoma japonicum] gi|226487086|emb|CAX75408.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Schistosoma japonicum] gi|226487088|emb|CAX75409.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Schistosoma japonicum] Length = 206 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 105 ERCIACKLCEAICPAQAITIEAEPRAD 131 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 146 CIYCGF--CQEACPVDAIVEGPNFEY 169 >gi|218701594|ref|YP_002409223.1| putative oxidoreductase [Escherichia coli IAI39] gi|218371580|emb|CAR19419.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli IAI39] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|117618050|ref|YP_856311.1| NADH dehydrogenase subunit I [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|156632700|sp|A0KJ60|NUOI_AERHH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|117559457|gb|ABK36405.1| NADH-quinone oxidoreductase chain i [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKSEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|83858406|ref|ZP_00951928.1| NADH dehydrogenase subunit I [Oceanicaulis alexandrii HTCC2633] gi|83853229|gb|EAP91081.1| NADH dehydrogenase subunit I [Oceanicaulis alexandrii HTCC2633] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGYCQEACPVDAI 117 Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 61 ERCIACKLCEAICPAQAITIEAEPRAD 87 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C + C E CPVD EG NF Sbjct: 102 CIYCGY--CQEACPVDAIVEGPNF 123 >gi|194337328|ref|YP_002019122.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309805|gb|ACF44505.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 258 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C C CV CP + ++ + + CI C C CP A+ + Sbjct: 115 TIPSLCNHCAEPPCVRSCPTEAVFKRNDGIVAFDYHRCIGCRSCMASCPYGAVSFNWREP 174 Query: 63 LELWLKINSEYATQWPNITTKK 84 I+ Y T+ + K Sbjct: 175 RPALKAISESYPTREMGVAEKC 196 >gi|303239438|ref|ZP_07325965.1| nitrite and sulphite reductase 4Fe-4S region [Acetivibrio cellulolyticus CD2] gi|302593001|gb|EFL62722.1| nitrite and sulphite reductase 4Fe-4S region [Acetivibrio cellulolyticus CD2] Length = 317 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 ++C CK + CP++ + L I+ + C +CG C+ +C DAI+ D++ G +++ Sbjct: 172 DSCNGCKKCSIEDTCPMNAAKVVDGILEINKEICNNCGRCDGKCHFDAIE-DSKVGYKIY 230 Query: 67 L 67 + Sbjct: 231 I 231 >gi|218782193|ref|YP_002433511.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763577|gb|ACL06043.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 320 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C CVE C + + D C+ CG+C +CP AI + + Sbjct: 254 DKCLGCGQ--CVEACGFLAVKMKDGRPVVESDRCLGCGICVDKCPSGAIVLERD 305 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 12/24 (50%) Query: 36 HPDECIDCGVCEPECPVDAIKPDT 59 PD+C+ CG C C A+K Sbjct: 252 DPDKCLGCGQCVEACGFLAVKMKD 275 >gi|167910108|ref|ZP_02497199.1| ferredoxin [Burkholderia pseudomallei 112] Length = 170 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|157804166|ref|YP_001492715.1| NADH dehydrogenase subunit I [Rickettsia canadensis str. McKiel] gi|226737413|sp|A8EZZ7|NUOI_RICCK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|157785429|gb|ABV73930.1| NADH dehydrogenase subunit I [Rickettsia canadensis str. McKiel] Length = 159 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 58 ERCIACKL--CEAICPAQAIVIEAEALDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 114 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 58 ERCIACKLCEAICPAQAIVIEAEA 81 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 99 CIYCGL--CQEACPVDAIVEGPNF 120 >gi|83746832|ref|ZP_00943879.1| Ferredoxin [Ralstonia solanacearum UW551] gi|207742236|ref|YP_002258628.1| ferredoxin protein [Ralstonia solanacearum IPO1609] gi|300705255|ref|YP_003746858.1| 4fe-4S ferredoxin-type protein [Ralstonia solanacearum CFBP2957] gi|83726417|gb|EAP73548.1| Ferredoxin [Ralstonia solanacearum UW551] gi|206593624|emb|CAQ60551.1| ferredoxin protein [Ralstonia solanacearum IPO1609] gi|299072919|emb|CBJ44275.1| 4Fe-4S ferredoxin-type protein [Ralstonia solanacearum CFBP2957] Length = 82 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDAPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|146296316|ref|YP_001180087.1| hypothetical protein Csac_1294 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409892|gb|ABP66896.1| protein of unknown function DUF362 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 375 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C +C CP + +CI C C CP AI Sbjct: 317 ACIGC--AECFNACPAQAIEMKSRKAYVDLKKCIRCYCCHELCPAKAI 362 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + CI C C CP AI+ Sbjct: 312 VFDRNACIGCAECFNACPAQAIE 334 >gi|15595559|ref|NP_249053.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa PAO1] gi|116054091|ref|YP_788534.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa UCBPP-PA14] gi|218889103|ref|YP_002437967.1| ferredoxin [Pseudomonas aeruginosa LESB58] gi|254237402|ref|ZP_04930725.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa C3719] gi|296386859|ref|ZP_06876358.1| ferredoxin [Pseudomonas aeruginosa PAb1] gi|313112022|ref|ZP_07797807.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa 39016] gi|9946213|gb|AAG03751.1|AE004474_3 ferredoxin (4Fe-4S) [Pseudomonas aeruginosa PAO1] gi|115589312|gb|ABJ15327.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa UCBPP-PA14] gi|126169333|gb|EAZ54844.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa C3719] gi|218769326|emb|CAW25086.1| ferredoxin [4Fe-4S] [Pseudomonas aeruginosa LESB58] gi|310884309|gb|EFQ42903.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa 39016] Length = 83 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDT 59 I D Sbjct: 59 IPLDD 63 >gi|302337816|ref|YP_003803022.1| hydrogenase large subunit domain protein [Spirochaeta smaragdinae DSM 11293] gi|301635001|gb|ADK80428.1| hydrogenase large subunit domain protein [Spirochaeta smaragdinae DSM 11293] Length = 575 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C CV CPV + + D C+ CG C CPV A Sbjct: 11 ACQDC--YKCVRECPVKAIEVKDGHAVVVQDLCLYCGHCVTVCPVGA 55 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 11/18 (61%) Query: 39 ECIDCGVCEPECPVDAIK 56 C DC C ECPV AI+ Sbjct: 11 ACQDCYKCVRECPVKAIE 28 >gi|317050575|ref|YP_004111691.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfurispirillum indicum S5] gi|316945659|gb|ADU65135.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurispirillum indicum S5] Length = 260 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 9 CILCKHTDCVEVCPVD--CFYEGENFLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGLE 64 C C CV CPV+ Y+ +N + +H + CI CG+C+ CP D + + Sbjct: 63 CNHCTDAPCVTACPVNPKAMYKKDNGITMHNEARCIGCGMCQSACPYTVASLDADKAAK 121 >gi|284007089|emb|CBA72363.1| anaerobic dimethyl sulfoxide reductase chain B [Arsenophonus nasoniae] Length = 208 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ C C CV CP + E+ L + + + C+ C CE CP A + D Sbjct: 60 YYLSIACNHCDSPTCVAGCPTGAMHKRAEDGLVVVNQEICVGCRYCELRCPYGAPQFDVN 119 Query: 61 PGL 63 L Sbjct: 120 KKL 122 >gi|262402395|ref|ZP_06078956.1| NrfC protein [Vibrio sp. RC586] gi|262351177|gb|EEZ00310.1| NrfC protein [Vibrio sp. RC586] Length = 212 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 82 SCQHCENPPCVYVCPTGAAYKDETTGIVDVHKERCVGCGYCIAACPYQ 129 >gi|262040646|ref|ZP_06013884.1| electron transporter HydN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042010|gb|EEW43043.1| electron transporter HydN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 161 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 16/47 (34%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCP + + CI C C CP A Sbjct: 57 ACRQCEDAPCASVCPQGAIQRDNDVWWVDQRRCIGCKSCMVACPYSA 103 >gi|268590651|ref|ZP_06124872.1| hydrogenase-2 operon protein HybA [Providencia rettgeri DSM 1131] gi|291314044|gb|EFE54497.1| hydrogenase-2 operon protein HybA [Providencia rettgeri DSM 1131] Length = 328 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 + + C+ C +CV VCPV + + C C C CP + Sbjct: 106 IKKQCMHCVDPNCVSVCPVQALKKDPKTGIVHYDASVCTGCRYCMVACPFN 156 >gi|269865863|ref|XP_002652072.1| RNase L inhibitor [Enterocytozoon bieneusi H348] gi|220063206|gb|EED41983.1| RNase L inhibitor [Enterocytozoon bieneusi H348] Length = 284 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 4 VVTENCI--LCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C +C CPV+ E + CI CG CE +CP +AI Sbjct: 16 VNEELCKPDKC-AAECKRYCPVNRIGKKCIEIPKKAVVDETLCIGCGQCEKKCPFNAI 72 >gi|73669121|ref|YP_305136.1| flavoprotein [Methanosarcina barkeri str. Fusaro] gi|72396283|gb|AAZ70556.1| archaeal flavoprotein [Methanosarcina barkeri str. Fusaro] Length = 239 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 M Y + C C+ E CP E F I +C CG+C+ CP AIK Sbjct: 144 MPYNIDRKQCRHCEDCPPRENCPHGAITEKNGFTDQIDLLKCKGCGICKELCPYKAIK 201 >gi|83312476|ref|YP_422740.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] gi|82947317|dbj|BAE52181.1| Fe-S-cluster-containing hydrogenase components 1 [Magnetospirillum magneticum AMB-1] Length = 231 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 + V C C CV+VCP + + + CI C C CP A Sbjct: 88 HSVPVMCQHCAKPACVDVCPTGASMKRADGIVLVDRHICIGCRYCMMACPYKA 140 >gi|47215704|emb|CAG04788.1| unnamed protein product [Tetraodon nigroviridis] Length = 212 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 111 ERCIACKL--CEAICPAQAITIEAETRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 167 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI + E Sbjct: 111 ERCIACKLCEAICPAQAITIEAE 133 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD +G NF Sbjct: 152 CIYCGF--CQEACPVDAIVQGPNF 173 >gi|219668269|ref|YP_002458704.1| rubrerythrin [Desulfitobacterium hafniense DCB-2] gi|219538529|gb|ACL20268.1| Rubrerythrin [Desulfitobacterium hafniense DCB-2] Length = 392 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECID-CGVCEPECPVDAIK--PDTEPGL 63 + C K C+ VCP I PD+C+D C C CP AI P+ P Sbjct: 8 DLCT--KDCLCLYVCPTGA--TDTETGQIDPDKCLDGCRACVDACPSHAISFVPEVYPPQ 63 Query: 64 E 64 + Sbjct: 64 Q 64 >gi|218884037|ref|YP_002428419.1| iindolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfurococcus kamchatkensis 1221n] gi|218765653|gb|ACL11052.1| iindolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfurococcus kamchatkensis 1221n] Length = 634 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 2 TYVV-TENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YVV E C C C+ CP E I ++C CG+C C DAI Sbjct: 577 PYVVDAEKCTGC--RACIASTGCP--AIIMVEGKAYIIEEDCNGCGLCVRYCQYDAI 629 >gi|153868840|ref|ZP_01998577.1| truncated electron transport protein DsrO [Beggiatoa sp. PS] gi|152074583|gb|EDN71423.1| truncated electron transport protein DsrO [Beggiatoa sp. PS] Length = 153 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+H CV+VCP F + + + CI C C CP A Sbjct: 16 CQHCEHPPCVDVCPTGASFKRVDGIVLVDKHICIGCRYCMMACPYKA 62 >gi|157371538|ref|YP_001479527.1| NADH dehydrogenase subunit I [Serratia proteamaculans 568] gi|270262807|ref|ZP_06191078.1| NADH-quinone oxidoreductase subunit I [Serratia odorifera 4Rx13] gi|157323302|gb|ABV42399.1| NADH-quinone oxidoreductase, chain I [Serratia proteamaculans 568] gi|270043491|gb|EFA16584.1| NADH-quinone oxidoreductase subunit I [Serratia odorifera 4Rx13] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|14590719|ref|NP_142789.1| putative ATPase RIL [Pyrococcus horikoshii OT3] gi|3257270|dbj|BAA29953.1| 590aa long hypothetical transport protein [Pyrococcus horikoshii OT3] Length = 590 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 9/66 (13%) Query: 7 ENCI--LCKHTDCVEVCPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C C H C VCPV+ E N I C CG+C +CP AI Sbjct: 9 DKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENNRPIIQEASCTGCGICVHKCPFKAISI 68 Query: 58 DTEPGL 63 P Sbjct: 69 VNLPEQ 74 >gi|323182731|gb|EFZ68133.1| iron-sulfur protein [Escherichia coli 1357] Length = 134 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 34 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 82 >gi|303243536|ref|ZP_07329878.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] gi|302486097|gb|EFL49019.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanothermococcus okinawensis IH1] Length = 386 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V +NC+ C CV CPV+ +N I +CI C +C CP +AI Sbjct: 128 VMDNCVGCGV--CVPECPVEAITIEDNKAVIDKTKCIYCSICGQTCPWNAI 176 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDE-------CIDCGVCEPECPVDAIK 56 C+LC CV+VCP++ E PDE C+ CGVC PECPV+AI Sbjct: 91 CVLC--QKCVDVCPIEIISIPGLVEKPKKQITIPDEPIAVMDNCVGCGVCVPECPVEAIT 148 Query: 57 PDTE 60 + Sbjct: 149 IEDN 152 Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C LC CVEVCP E + + +P +C+ CG C CP Sbjct: 34 CTLCMQ--CVEVCPTGALSEIDGKIDYNPVKCMKCGKCAEACPT 75 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 10/63 (15%) Query: 9 CILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 CI+C C CP G N + +P C CG C CP+ ++ D Sbjct: 296 CIVCG--ACTVACPTGALKMGTINHNGKDYNRIEFNPSLCDKCGKCVEVCPMKVLEIDEN 353 Query: 61 PGL 63 Sbjct: 354 DEH 356 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD 53 CI C C E+CP + + N + + P C C +C CPV+ Sbjct: 200 CIGC--FKCAEICPGNMIKVDKNNLIVMPPKACPACSLCVNVCPVN 243 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C EVCP E + CI CG C CP A+K Sbjct: 273 KECAEVCPTRAIKVDEKSKTV--KMCIVCGACTVACPTGALK 312 >gi|297518377|ref|ZP_06936763.1| formate-dependent nitrite reductase; Fe-S centers [Escherichia coli OP50] Length = 173 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 41 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 87 >gi|294339322|emb|CAZ87678.1| Ferredoxin [Thiomonas sp. 3As] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T++CI C C CP + + G I+PD C +C C CPV+ Sbjct: 1 MALWITDDCINCDV--CEPECPNEAIFMGPEIYEINPDRCTECVGHFDTPQCVQICPVNC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|291614173|ref|YP_003524330.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291584285|gb|ADE11943.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 243 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 +C+ C+ CV VCP + E+ + + D+CI C C CP A + D + Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKEDGIVLVDYDKCIGCKYCTWACPYGAREIDEKQ 127 >gi|227824723|ref|ZP_03989555.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905222|gb|EEH91140.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 411 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C + C +VC D + G++ ++I D+C+ C C C +DA+K Sbjct: 52 CSEEEQGSCAQVCHWDALHPGKDGISIDNDKCVGCQACVDACKLDALK 99 >gi|170754957|ref|YP_001783189.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] gi|169120169|gb|ACA44005.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra] Length = 449 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I ++C DCG C CP +I Sbjct: 81 DCSMDCKKEGGKTFCQNSCPFDAILINKKTNSTYIDTEKCTDCGFCVEACPTGSI 135 >gi|171184831|ref|YP_001793750.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934043|gb|ACB39304.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 221 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV CP + Y+ + L + CI C C CP A+ D + Sbjct: 63 CQHCDKPYCVATCPTNALYKDRDGLVKLRESSCIGCKYCLAACPYGAVWWDEK 115 >gi|218780382|ref|YP_002431700.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761766|gb|ACL04232.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 302 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 NC C C CP++ + I D C+ CG+C +CP D I+ Sbjct: 234 NCGAC--RVCTTACPLEAISNTDGRAEIREDRCMGCGICAAQCPNDKIR 280 >gi|124027636|ref|YP_001012956.1| hypothetical protein Hbut_0757 [Hyperthermus butylicus DSM 5456] gi|123978330|gb|ABM80611.1| hypothetical protein Hbut_0757 [Hyperthermus butylicus DSM 5456] Length = 494 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 8/57 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C LC C + CP EG L +H D CI CG C CP DAI Sbjct: 344 VDQERCTLCG--ACAKECPTGALKLREEAEGSALLFLH-DRCIACGWCREVCPEDAI 397 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Query: 32 FLAI-HPDECIDCGVCEPECPVDAIK--PDTEPGLELWL 67 L I + C CG C ECP A+K + E L+L Sbjct: 340 GLVIVDQERCTLCGACAKECPTGALKLREEAEGSALLFL 378 >gi|20808576|ref|NP_623747.1| pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|254479652|ref|ZP_05092953.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Carboxydibrachium pacificum DSM 12653] gi|20517204|gb|AAM25351.1| Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|214034406|gb|EEB75179.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Carboxydibrachium pacificum DSM 12653] Length = 583 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C C+ + CP + + +I PD+C C VC+ CP DAI+ Sbjct: 528 EKCKKCG--MCLRIGCP--AISKKDGIFSIDPDQCTGCTVCQQVCPFDAIE 574 >gi|50554865|ref|XP_504841.1| YALI0F00924p [Yarrowia lipolytica] gi|6689658|emb|CAB65524.1| subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) [Yarrowia lipolytica] gi|49650711|emb|CAG77643.1| YALI0F00924p [Yarrowia lipolytica] Length = 229 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPALAITIDAEERIDGSRRTTKYDIDMTKCIYCGYCQESCPVDAIV 185 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 +T N EYAT+ + K++ L + K + Sbjct: 186 -ETP---------NVEYATETREELLYNKEKLLANGDKWE 215 >gi|317492616|ref|ZP_07951043.1| NADH-quinone oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919366|gb|EFV40698.1| NADH-quinone oxidoreductase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|312967579|ref|ZP_07781794.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 2362-75] gi|312287776|gb|EFR15681.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 2362-75] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|300723697|ref|YP_003713004.1| NADH dehydrogenase I subunit I, 2Fe-2S ferredoxin-related [Xenorhabdus nematophila ATCC 19061] gi|297630221|emb|CBJ90872.1| NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related [Xenorhabdus nematophila ATCC 19061] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F ++ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHKDGRWYPEFFRVNFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|288817477|ref|YP_003431824.1| cytochrome b/b6 [Hydrogenobacter thermophilus TK-6] gi|288786876|dbj|BAI68623.1| cytochrome b/b6 [Hydrogenobacter thermophilus TK-6] gi|308751084|gb|ADO44567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobacter thermophilus TK-6] Length = 647 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ++ E C C+ C CP + +E + ++ +C CG+C C V AI Sbjct: 294 AHIDFEKCTGCEQ--CYIDCPYEAITMKDFEDKKKAVLNESKCAGCGICVGSCSVQAIDI 351 Query: 58 DTEPGLE 64 T P E Sbjct: 352 PTFPIEE 358 >gi|225166802|ref|YP_002650787.1| putative dihydroorotate dehydrogenase family protein [Clostridium botulinum] gi|253771334|ref|YP_003034159.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum D str. 1873] gi|225007466|dbj|BAH29562.1| putative dihydroorotate dehydrogenase family protein [Clostridium botulinum] gi|253721311|gb|ACT33604.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum D str. 1873] Length = 362 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ E+ CI C C VCP + + + +C CG+CE +CPVDAI Sbjct: 307 VIDEDKCIKCGV--CERVCPYFALKL-KEKINVDTTKCFGCGLCESKCPVDAI 356 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 16/31 (51%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + I D+CI CGVCE CP A+K Sbjct: 299 IKFNPDNPVIDEDKCIKCGVCERVCPYFALK 329 >gi|39936007|ref|NP_948283.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris CGA009] gi|192291662|ref|YP_001992267.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris TIE-1] gi|81562357|sp|Q6N5N2|NUOI1_RHOPA RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|39649861|emb|CAE28383.1| NADH-ubiquinone dehydrogenase chain I [Rhodopseudomonas palustris CGA009] gi|192285411|gb|ACF01792.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris TIE-1] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 117 >gi|331270137|ref|YP_004396629.1| transcriptional regulator [Clostridium botulinum BKT015925] gi|329126687|gb|AEB76632.1| transcriptional regulator [Clostridium botulinum BKT015925] Length = 629 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%) Query: 3 YVVTENCILCKHTDCVEVCPV-DC----FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + ENC+ C C+ CP+ D F +G+N + ++ D+CI CG C C +A + Sbjct: 8 YTIEENCVGCNQ--CIRYCPIFDANTAYFSKGQNKVKVNIDKCIHCGKCIDVCEHEAREY 65 Query: 58 DTE 60 + Sbjct: 66 HDD 68 >gi|303230564|ref|ZP_07317317.1| 4Fe-4S binding domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514757|gb|EFL56746.1| 4Fe-4S binding domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 271 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 3/66 (4%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M + V TE C C CV CP EN CI CG C CP A+ D Sbjct: 1 MLFTVNTEVCTRCGL--CVADCPTGLLVMSENGPVTGKGGCISCGHCISVCPTLALDSDM 58 Query: 60 EPGLEL 65 P E Sbjct: 59 TPRKEQ 64 >gi|262280053|ref|ZP_06057838.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262260404|gb|EEY79137.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCDV--CEPVCPNEAIFMGEVIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGL 63 I D E Sbjct: 59 IPKDPEHEE 67 >gi|326201720|ref|ZP_08191591.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium papyrosolvens DSM 2782] gi|325988320|gb|EGD49145.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium papyrosolvens DSM 2782] Length = 597 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 3 YVVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + +NC CK C+ CP F +G + I P C CG+C CP +AI + Sbjct: 541 YTIKDNCKNCK--KCITDIGCPAISFIDG--KVNIEPSLCYGCGLCTNVCPFNAIGGEEN 596 Query: 61 P 61 Sbjct: 597 E 597 >gi|225405642|ref|ZP_03760831.1| hypothetical protein CLOSTASPAR_04863 [Clostridium asparagiforme DSM 15981] gi|225042836|gb|EEG53082.1| hypothetical protein CLOSTASPAR_04863 [Clostridium asparagiforme DSM 15981] Length = 471 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C +C++ CP + +I+ CIDCG C CP A Sbjct: 15 CKGC--INCIKRCPTEAIRVRGGKASINNKFCIDCGECIRVCPHHA 58 >gi|218706392|ref|YP_002413911.1| putative oxidoreductase [Escherichia coli UMN026] gi|300896220|ref|ZP_07114769.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300936168|ref|ZP_07151104.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] gi|218433489|emb|CAR14392.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli UMN026] gi|300359954|gb|EFJ75824.1| 4Fe-4S binding domain protein [Escherichia coli MS 198-1] gi|300458625|gb|EFK22118.1| 4Fe-4S binding domain protein [Escherichia coli MS 21-1] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|197122842|ref|YP_002134793.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] gi|196172691|gb|ACG73664.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. K] Length = 326 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+ CP + E + + I D CI C C CP A Sbjct: 181 CQQCRNPPCVKACPTQATWKEQDGIVVIDYDWCIGCRCCMSACPYGA 227 >gi|152983310|ref|YP_001354824.1| ferredoxin [Janthinobacterium sp. Marseille] gi|151283387|gb|ABR91797.1| ferredoxin [Janthinobacterium sp. Marseille] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 9/79 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y G+ I P +C +C C+ CPV Sbjct: 1 MALLITDECINCDV--CEPECPNDAIYMGQEIYEIDPTKCTECVGHFDEPQCQQVCPVSC 58 Query: 55 IKPDTEPGLELWLKINSEY 73 I P E ++ ++Y Sbjct: 59 I-PFNPEWRESKEELQAKY 76 >gi|220928814|ref|YP_002505723.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Clostridium cellulolyticum H10] gi|219999142|gb|ACL75743.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium cellulolyticum H10] Length = 598 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 3 YVVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y + NC CK C+ CP EG + I P C CG+C CP DAI + Sbjct: 542 YSIKANCKDCK--KCITEIGCPAISVIEG--KVRIEPSLCYGCGLCTNVCPFDAIGGEEN 597 Query: 61 P 61 Sbjct: 598 E 598 >gi|71083590|ref|YP_266309.1| NADH dehydrogenase subunit I [Candidatus Pelagibacter ubique HTCC1062] gi|91761989|ref|ZP_01263954.1| NADH dehydrogenase subunit I [Candidatus Pelagibacter ubique HTCC1002] gi|115502537|sp|Q4FM83|NUOI_PELUB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|71062703|gb|AAZ21706.1| NADH Dehydrogenase I Chain I [Candidatus Pelagibacter ubique HTCC1062] gi|91717791|gb|EAS84441.1| NADH dehydrogenase subunit I [Candidatus Pelagibacter ubique HTCC1002] Length = 161 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+CE CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIESSERADGSRKTTRYDIDMMKCIYCGLCEESCPVDAI 116 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++ + Sbjct: 60 ERCIACKLCEAVCPAQAITIESSERAD 86 >gi|332299288|ref|YP_004441209.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|332176351|gb|AEE12041.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 393 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 7 ENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 + C C+ C ++CP C EG ++ + D CI+C CE CP Sbjct: 8 QRCCGCE--ACRQICPKGCIRLERDEEGFDYPIVDTDRCIECHKCERVCPF 56 >gi|323698473|ref|ZP_08110385.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323458405|gb|EGB14270.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 95 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 T+ C+ C CV+VCP E I D C++CG C CPV+AI Sbjct: 17 TDKCVGCG--SCVDVCPHRILAVRERKTTILDFDACMECGACARNCPVEAI 65 >gi|317153808|ref|YP_004121856.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944059|gb|ADU63110.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] Length = 275 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C H CV VCPV D EG I+P CI C C CP A Sbjct: 89 PCMQCGHPACVPVCPVVATDKNEEGGIVSQIYP-RCIGCRYCMAACPYHA 137 >gi|258514877|ref|YP_003191099.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778582|gb|ACV62476.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 272 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 NC CK C VCP+ + E+ ++ CI C C CP +A D + L Sbjct: 201 NCTDCKV--CASVCPMGSI-DYEDVSKLN-GICIKCCACIKSCPTEAKYFDDKDYLRHKY 256 Query: 68 KINSEYATQ 76 ++ E+A++ Sbjct: 257 ELEVEFASR 265 >gi|257790266|ref|YP_003180872.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257474163|gb|ACV54483.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 219 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 C C +CV+VCP ++ + I +CI C C CP + + E Sbjct: 65 CQHCADPECVKVCPTGASHKAADGTVQIDKSKCIGCQFCAMSCPYNVRYLNEEE 118 >gi|167918137|ref|ZP_02505228.1| ferredoxin [Burkholderia pseudomallei BCC215] Length = 176 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|154148497|ref|YP_001407281.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter hominis ATCC BAA-381] gi|153804506|gb|ABS51513.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter hominis ATCC BAA-381] Length = 188 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +C++C+++ CVEVCP ++ EN + I+ + C+ C C CP DA D Sbjct: 57 SCVMCENSPCVEVCPTGASFKTENGITLINHNLCVSCKYCILACPYDARFVD 108 >gi|157164593|ref|YP_001467233.1| anaerobic dimethyl sulfoxide reductase chain B [Campylobacter concisus 13826] gi|112801850|gb|EAT99194.1| anaeroBic dimethyl sulfoxide reductase chain b (dmso reductase iron-sulfur subunit) [Campylobacter concisus 13826] Length = 187 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++C++C+ CVEVCP F + + C+ C C CP DA Sbjct: 56 QSCVMCEDAPCVEVCPTGASFKTADGVTLLDHRICVSCKYCILACPYDA 104 >gi|332528159|ref|ZP_08404190.1| putative glutamate synthase (NADPH) small subunit [Rubrivivax benzoatilyticus JA2] gi|332112730|gb|EGJ12523.1| putative glutamate synthase (NADPH) small subunit [Rubrivivax benzoatilyticus JA2] Length = 541 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 NC+ C +C VCP + + A+ D C CG+C ECP AI Sbjct: 488 NCLQCD--NCYGVCPDNAVKKLAPGRYAVDYDYCKGCGLCAVECPCGAI 534 >gi|323197142|gb|EFZ82282.1| cytochrome c nitrite reductase, Fe-S protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] Length = 136 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 4 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 50 >gi|256078647|ref|XP_002575606.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni] gi|238660848|emb|CAZ31839.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Schistosoma mansoni] Length = 206 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 105 ERCIACKLCEAICPAQAITIEAEPRAD 131 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 146 CIYCGF--CQEACPVDAIVEGPNFEY 169 >gi|157145889|ref|YP_001453208.1| electron transport complex protein RnfB [Citrobacter koseri ATCC BAA-895] gi|166225081|sp|A8AH09|RNFB_CITK8 RecName: Full=Electron transport complex protein rnfB gi|157083094|gb|ABV12772.1| hypothetical protein CKO_01640 [Citrobacter koseri ATCC BAA-895] Length = 192 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK-- 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTQCIELR 165 Query: 57 --PDTEPGLEL 65 +T + Sbjct: 166 PVAETPDSWKW 176 >gi|119476464|ref|ZP_01616815.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2143] gi|119450328|gb|EAW31563.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [marine gamma proteobacterium HTCC2143] Length = 201 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 114 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCI 166 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 VE P+D + EN I DECI C C CPVDAI Sbjct: 96 VEAVPLDAEHGEENVKTVAYIREDECIGCTKCIQACPVDAI 136 >gi|52549176|gb|AAU83025.1| heterodisulfide reductase catalytic chain A [uncultured archaeon GZfos26D6] Length = 287 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +V C+ C C +CP D + ++ C CG C CP AI Sbjct: 214 AFVNEGICVGCG--TCEAICPFDALSLEAGVMHVNEVVCKGCGSCGSACPSGAITMRHFK 271 Query: 62 GLELWLKINS 71 +++ +I + Sbjct: 272 DEQIFAQIEA 281 >gi|91773868|ref|YP_566560.1| hypothetical protein Mbur_1929 [Methanococcoides burtonii DSM 6242] gi|91712883|gb|ABE52810.1| Phosphoadenosine phosphosulfate reductase fused to RNA-binding PUA and 4Fe-4S binding domains [Methanococcoides burtonii DSM 6242] Length = 633 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 C+ C CV CP +C E+ AI +CI CG C CPV Sbjct: 589 CMGCGV--CVGKCPKNCITI-EDGKAIISSKCIHCGACVEICPV 629 >gi|51246903|ref|YP_066787.1| electron transfer flavoprotein, alpha subunit [Desulfotalea psychrophila LSv54] gi|50877940|emb|CAG37780.1| probable electron transfer flavoprotein, alpha subunit [Desulfotalea psychrophila LSv54] Length = 436 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CI C C CPV C + I+ +CI C C CP +A++ Sbjct: 19 CISCGGR-CESSCPVACITMSDAGEPQINTAKCIGCKKCVKACPGEALE 66 >gi|34556490|ref|NP_906305.1| hypothetical protein WS0032 [Wolinella succinogenes DSM 1740] gi|34482204|emb|CAE09205.1| hypothetical protein WS0032 [Wolinella succinogenes] Length = 126 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 15/73 (20%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGEN-------FLAIHPDECIDCG-----VCEP 48 M ++T++CI C C+E CP ++ + P++CI+C C Sbjct: 1 MAVMITDSCINCD--SCIEECPATAIVSADDAPIAGFEHTYVKPEKCIECADSTVPKCAD 58 Query: 49 ECPVD-AIKPDTE 60 CP + AI D Sbjct: 59 ICPTEGAIVWDMP 71 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + D CI+C C ECP AI + + + Sbjct: 1 MAVMITDSCINCDSCIEECPATAIVSADDAPIAGF 35 >gi|325297885|ref|YP_004257802.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317438|gb|ADY35329.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Bacteroides salanitronis DSM 18170] Length = 380 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 7 ENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C CK C+ C D F EG ++I+ D C+ CG C C DAI + ++ Sbjct: 199 DACRGCK--RCMRECANDGLVFDEGRKKMSINQDNCVGCGRCIGACNFDAIGFAQDAAIK 256 Query: 65 LWLKINSEYAT 75 ++N A Sbjct: 257 ---ELNCRMAE 264 >gi|304398209|ref|ZP_07380083.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. aB] gi|308187597|ref|YP_003931728.1| NADH dehydrogenase I chain I [Pantoea vagans C9-1] gi|304354075|gb|EFM18448.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. aB] gi|308058107|gb|ADO10279.1| NADH dehydrogenase I chain I [Pantoea vagans C9-1] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|294101124|ref|YP_003552982.1| electron transport complex, RnfABCDGE type, B subunit [Aminobacterium colombiense DSM 12261] gi|293616104|gb|ADE56258.1| electron transport complex, RnfABCDGE type, B subunit [Aminobacterium colombiense DSM 12261] Length = 266 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C ++CP +N I+PD C C +C +CP AI Sbjct: 217 CIGCGL--CAKLCPSQAITMKDNLPVINPDLCTGCKICAMKCPARAI 261 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 2/52 (3%) Query: 6 TENC-ILC-KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T+ C C CV C D + + C CG C CP D I Sbjct: 136 TKACKNGCLGFGSCVTACAFDAISVEDGVAVVDESLCTGCGACVAACPRDVI 187 >gi|293395177|ref|ZP_06639463.1| NADH dehydrogenase I subunit I [Serratia odorifera DSM 4582] gi|291422354|gb|EFE95597.1| NADH dehydrogenase I subunit I [Serratia odorifera DSM 4582] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEQKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|84685011|ref|ZP_01012910.1| benzoyl-CoA oxygenase, A subunit [Maritimibacter alkaliphilus HTCC2654] gi|84666743|gb|EAQ13214.1| benzoyl-CoA oxygenase, A subunit [Rhodobacterales bacterium HTCC2654] Length = 397 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E CI C C CP++ ++ + + ++C C C P CP +I + W Sbjct: 13 EICIRC--YTCEMTCPIEAITHNDDNVVVDAEKCNFCMDCIPVCPTGSI--------DEW 62 Query: 67 LKINSEYA----TQWPNITTKKESLPSAA 91 +N Y+ +W + + + PSA Sbjct: 63 RVVNEPYSLDEQFEWTELPEQGDVEPSAE 91 Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP++AI + + Sbjct: 10 IDPEICIRCYTCEMTCPIEAITHNDD 35 >gi|292488197|ref|YP_003531079.1| electron transport complex protein RnfB [Erwinia amylovora CFBP1430] gi|292899403|ref|YP_003538772.1| electron transport complex protein [Erwinia amylovora ATCC 49946] gi|291199251|emb|CBJ46368.1| electron transport complex protein [Erwinia amylovora ATCC 49946] gi|291553626|emb|CBA20671.1| Electron transport complex protein rnfB [Erwinia amylovora CFBP1430] gi|312172334|emb|CBX80591.1| Electron transport complex protein rnfB [Erwinia amylovora ATCC BAA-2158] Length = 191 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDICTGCDLCVAPCPTDCIE 162 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 111 IDEANCIGCTKCIQACPVDAI 131 >gi|283833245|ref|ZP_06352986.1| electron transport complex, RnfABCDGE type, B subunit [Citrobacter youngae ATCC 29220] gi|291070881|gb|EFE08990.1| electron transport complex, RnfABCDGE type, B subunit [Citrobacter youngae ATCC 29220] Length = 192 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK-- 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTQCIELR 165 Query: 57 --PDTEPGLEL 65 +T + Sbjct: 166 PVAETPDSWKW 176 >gi|281205874|gb|EFA80063.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Polysphondylium pallidum PN500] Length = 179 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 14/75 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 78 ERCIACKL--CEAICPAQAITIEAEPRKDGSRRTTRYDIDMTKCIYCGYCQEACPVDAIV 135 Query: 57 --PDTEPGLELWLKI 69 P+ E E +++ Sbjct: 136 EGPNFEFTTESRIEL 150 >gi|255524028|ref|ZP_05390990.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] gi|296186885|ref|ZP_06855286.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255512315|gb|EET88593.1| hydrogenase large subunit domain protein [Clostridium carboxidivorans P7] gi|296048599|gb|EFG88032.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 449 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 8 NCILCKHTD-CVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTE 60 +C+ C CP + + + I D C DCG C CP I E Sbjct: 84 DCVNTSEKPLCQASCPFNAIFVDKESKSTYIDNDRCTDCGFCVEACPTGGILDKVE 139 >gi|213583592|ref|ZP_03365418.1| cytochrome c-type biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 156 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C H CV+VCP F + + + ++PD C+ C C CP Sbjct: 90 SCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPY 136 >gi|330504281|ref|YP_004381150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] gi|328918567|gb|AEB59398.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina NK-01] Length = 470 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C T CV+VCP L ECI CG C C Sbjct: 269 DCIDC--TVCVQVCPTGIDIRDGLQL-----ECIGCGACVDAC 304 >gi|328869461|gb|EGG17839.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium fasciculatum] Length = 213 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLA---------IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E L I +CI CG C+ CPVDAI Sbjct: 112 ERCIACKL--CEAICPAQAITIEAEPRLDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 169 Query: 57 --PDTEPGLELWLKI 69 P+ E E +++ Sbjct: 170 EGPNFEFTTESRIEL 184 >gi|325832581|ref|ZP_08165409.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] gi|325485986|gb|EGC88445.1| 4Fe-4S binding domain protein [Eggerthella sp. HGA1] Length = 207 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 M Y +T C C++ C +VCPV Y+ + D+CI C +C CP Sbjct: 58 MRY-ITVGCQHCENPACTKVCPVGATYKDPETGVVRQDYDKCIGCRMCMAACPYT 111 >gi|304382390|ref|ZP_07364890.1| ferredoxin [Prevotella marshii DSM 16973] gi|304336452|gb|EFM02688.1| ferredoxin [Prevotella marshii DSM 16973] Length = 259 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAI 55 V E CI C C VCP+ G+ I H D+CI C C CPV AI Sbjct: 190 VNNERCIRCG--RCATVCPMQNITGGKGEKPIWHHTDDCISCFACYHGCPVHAI 241 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 + ++ + CI CG C CP+ I Sbjct: 184 TDRPFRVNNERCIRCGRCATVCPMQNI 210 >gi|238786132|ref|ZP_04630086.1| Protein nrfC [Yersinia bercovieri ATCC 43970] gi|238712960|gb|EEQ05018.1| Protein nrfC [Yersinia bercovieri ATCC 43970] Length = 212 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPV 52 +C C CV+VCP Y + ++PD C+ C C CP Sbjct: 80 SCQHCDKAPCVDVCPTGASYRDKATGIVDVNPDLCVGCQYCIAACPY 126 >gi|226195339|ref|ZP_03790928.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei Pakistan 9] gi|225932541|gb|EEH28539.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei Pakistan 9] Length = 189 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|121535425|ref|ZP_01667236.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121306024|gb|EAX46955.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 191 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDA 54 ++C++C ++ CV VCP Y ++ + I +C+ C C CP A Sbjct: 60 QSCVMCDNSPCVSVCPTGASYTNKDGVNLIDEKKCVGCKYCVTACPYQA 108 >gi|82777689|ref|YP_404038.1| NADH dehydrogenase subunit I [Shigella dysenteriae Sd197] gi|110287773|sp|Q32DQ8|NUOI_SHIDS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81241837|gb|ABB62547.1| NADH dehydrogenase I chain I [Shigella dysenteriae Sd197] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKTETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|220931143|ref|YP_002508051.1| putative PAS/PAC sensor protein [Halothermothrix orenii H 168] gi|219992453|gb|ACL69056.1| putative PAS/PAC sensor protein [Halothermothrix orenii H 168] Length = 877 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 7/81 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-PDTEPG 62 + + C C CV CPV + D CI CG C C A K D + Sbjct: 7 TIKDRCHEC--YACVRNCPVKAVRVKNRQAEVISDRCIHCGNCVLVCSQGAKKVRDFKEI 64 Query: 63 LELWLKIN----SEYATQWPN 79 + +L+ N + A +P+ Sbjct: 65 AKQFLQDNDKIVAGLAPSFPS 85 >gi|89895803|ref|YP_519290.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219670234|ref|YP_002460669.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335251|dbj|BAE84846.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219540494|gb|ACL22233.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 206 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAI-HPDECIDCGVCEPECPV 52 NC C + CV+ CPV + E+ + I D+CI C C CP Sbjct: 63 NCQHCANPACVKACPVGATYKREEDGIVIQDYDKCIGCRYCMVACPY 109 >gi|326405118|ref|YP_004285200.1| hypothetical protein ACMV_29710 [Acidiphilium multivorum AIU301] gi|325051980|dbj|BAJ82318.1| hypothetical protein ACMV_29710 [Acidiphilium multivorum AIU301] Length = 247 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C++ CV VCP + E+ + ++ D CI C +C CP A + D G Sbjct: 83 SCLHCENPLCVTVCPTGASYKRAEDGIVLVNTDICIGCKLCSWACPYGAREFDEHDG 139 >gi|323484495|ref|ZP_08089861.1| hypothetical protein HMPREF9474_01612 [Clostridium symbiosum WAL-14163] gi|323692556|ref|ZP_08106789.1| Fe-S cluster domain-containing protein [Clostridium symbiosum WAL-14673] gi|323402273|gb|EGA94605.1| hypothetical protein HMPREF9474_01612 [Clostridium symbiosum WAL-14163] gi|323503422|gb|EGB19251.1| Fe-S cluster domain-containing protein [Clostridium symbiosum WAL-14673] Length = 470 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E C C +C++ CP I+ CIDCG C CP A Sbjct: 13 ELCKGC--INCIKRCPTQAIRVRNRKAQINSKFCIDCGECIRVCPHHA 58 >gi|291528500|emb|CBK94086.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium rectale M104/1] Length = 289 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C CV+ C + + I D+C +C C CP DA Sbjct: 165 DDCIQCGV--CVKACREGALSMEDGRIVIDRDKCNNCARCVKSCPTDA 210 Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C++ D +G + D+CI CGVC C A+ + Sbjct: 143 NCLKAEENDVGIKGGMTVECSHDDCIQCGVCVKACREGALSMED 186 >gi|88607532|ref|YP_505378.1| NADH dehydrogenase subunit I [Anaplasma phagocytophilum HZ] gi|115502516|sp|Q2GJS3|NUOI_ANAPZ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|88598595|gb|ABD44065.1| NADH dehydrogenase I, I subunit [Anaplasma phagocytophilum HZ] Length = 164 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAICPAQAITIEAEERSDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNFEY 127 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 63 ERCIACKLCEAICPAQAITIEAEE 86 >gi|91977347|ref|YP_570006.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisB5] gi|123748991|sp|Q135Y4|NUOI2_RHOPS RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|91683803|gb|ABE40105.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisB5] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|332798424|ref|YP_004459923.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696159|gb|AEE90616.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] Length = 504 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 M + E C C + CV+ CP++ I+ D C++CG+C C +AIK Sbjct: 1 MIVIDLEKCRGC--SLCVKNCPLEAIKVINKKAKIN-DNCVNCGICFRVCTFEAIK 53 >gi|323698251|ref|ZP_08110163.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. ND132] gi|323458183|gb|EGB14048.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio desulfuricans ND132] Length = 267 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V ++C+ C C E CPV +++ ++CI C C CP +A Sbjct: 191 VGDSCVQCG--TCAEHCPVGAIS-ADDYTKTDAEKCIKCCACIKVCPENA 237 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 8/38 (21%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 PVD G D C+ CG C CPV AI D Sbjct: 185 PVDFIAVG--------DSCVQCGTCAEHCPVGAISADD 214 >gi|295106716|emb|CBL04259.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 185 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ C+ VCP + + + + I ++CI C +C CP +A Sbjct: 44 ACQHCENPACLRVCPTGATYKDDKGRVEIDYEKCIGCRMCMAACPYNA 91 >gi|294496384|ref|YP_003542877.1| hypothetical protein Mmah_1737 [Methanohalophilus mahii DSM 5219] gi|292667383|gb|ADE37232.1| protein of unknown function DUF362 [Methanohalophilus mahii DSM 5219] Length = 369 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C CV CP + Y I CI C C CP A+K Sbjct: 311 ADKCTACG--ACVRNCPAEAIYMDNGHAVIDAGICILCYCCRELCPAAAVK 359 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 13/25 (52%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPD 58 I D+C CG C CP +AI D Sbjct: 308 EIDADKCTACGACVRNCPAEAIYMD 332 >gi|257468686|ref|ZP_05632780.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fusobacterium ulcerans ATCC 49185] gi|317062941|ref|ZP_07927426.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313688617|gb|EFS25452.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 56 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 YV+ + CI C C CPV ++ D C+DCG C CPV AI + Sbjct: 2 YVIDKDACIGCG--ACEGTCPVGAISSTDDGKYGISDSCVDCGACAGGCPVSAIAAE 56 Score = 41.3 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I D CI CG CE CPV AI + Sbjct: 1 MYVIDKDACIGCGACEGTCPVGAISSTDD 29 >gi|296135227|ref|YP_003642469.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] gi|295795349|gb|ADG30139.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thiomonas intermedia K12] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T++CI C C CP + + G I+PD C +C C CPV+ Sbjct: 1 MALWITDDCINCDV--CEPECPNEAIFMGPEIYEINPDRCTECVGHFDTPQCVQICPVNC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|238762146|ref|ZP_04623118.1| Protein nrfC [Yersinia kristensenii ATCC 33638] gi|238699493|gb|EEP92238.1| Protein nrfC [Yersinia kristensenii ATCC 33638] Length = 212 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPV 52 +C C CV+VCP Y + + PD C+ C C CP Sbjct: 80 SCQHCDKAPCVDVCPTGASYRDKASGIVDVDPDLCVGCQYCIAACPY 126 >gi|182705280|sp|P60200|HDRA_METJA RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit A Length = 657 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV C C C VCP++ E G I D CI CG Sbjct: 239 YVDENICTGCG--ACAAVCPIEVPNEFDLGLGTRKAIYVPFAQAVPLVYTIDMDHCIRCG 296 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C AI+ D +P Sbjct: 297 LCEKACGPGAIRYDQKPEE 315 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECIDCGVCEPECPVDA 54 V + C C C ++CP + E + L ++ C CG C CP A Sbjct: 576 AVVDEDVCGGC--QVCAKMCPYNAITYVEKDGHLVAQVNDVACKGCGSCAGACPSGA 630 Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 13/30 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + D C C VC CP +AI + G Sbjct: 577 VVDEDVCGGCQVCAKMCPYNAITYVEKDGH 606 >gi|167737726|ref|ZP_02410500.1| ferredoxin [Burkholderia pseudomallei 14] Length = 173 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|159905364|ref|YP_001549026.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159886857|gb|ABX01794.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 395 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT++C+ C CV CPVD E+ I D+CI C VC CP +AI Sbjct: 128 VTKDCVACGV--CVPECPVDAISI-EDIAVIDTDKCIYCTVCSQTCPWNAIF 176 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C+ CVE CP Y GE P C CG+C CPV+AI + E Sbjct: 194 VNEEECIGCE--KCVEACPGSMIEYNGEALGVKLPVACPACGLCVESCPVEAIGLEVE 249 Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%) Query: 8 NCILCKHTDCVEVCPVDCFYE----------GENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CVE CPV+ + L ++C CG C +CP AIK Sbjct: 228 ACPACGL--CVESCPVEAIGLEVEYASAKPVTDEGLVWLEEKCAYCGPCALKCPTGAIKV 285 Query: 58 DTEPGLEL 65 GLEL Sbjct: 286 VNPKGLEL 293 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 T+ CI C T C + CP + + ++ +ECI C C CP I Sbjct: 157 TDKCIYC--TVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMI 214 Query: 56 KPDTEP 61 + + E Sbjct: 215 EYNGEA 220 Score = 34.0 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 8/48 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C++C C + CP + CI C C CP A Sbjct: 9 DACLVCN--ACAKACPTEAIEIAPFK------TCIQCFSCANACPTGA 48 >gi|160892005|ref|ZP_02073008.1| hypothetical protein BACUNI_04464 [Bacteroides uniformis ATCC 8492] gi|156858483|gb|EDO51914.1| hypothetical protein BACUNI_04464 [Bacteroides uniformis ATCC 8492] Length = 315 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C C + CV+ CP +G+ + ++CI C C CP A DT Sbjct: 243 VDAERCTHCGY--CVKHCPAGAIIKGDECNTV-AEKCIKCCACVKGCPQKARTYDTP 296 >gi|145298716|ref|YP_001141557.1| NADH dehydrogenase subunit I [Aeromonas salmonicida subsp. salmonicida A449] gi|156632701|sp|A4SLN7|NUOI_AERS4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|142851488|gb|ABO89809.1| NADH dehydrogenase I, I subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAERDDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|187477591|ref|YP_785615.1| ferredoxin [Bordetella avium 197N] gi|115422177|emb|CAJ48701.1| ferredoxin [Bordetella avium 197N] Length = 213 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C+ CPVD + + D C C +C CPVD I D P W Sbjct: 85 CIGC--TLCIRACPVDAIAGANKRMHTVLADLCSGCDLCVAPCPVDCI--DMVPAGRDWT 140 Query: 68 KINSEYATQ 76 ++ A Q Sbjct: 141 ASDASAARQ 149 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 80 IDEAHCIGCTLCIRACPVDAI 100 >gi|113971988|ref|YP_735781.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113886672|gb|ABI40724.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 182 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 +C+ C + C+ CP + + L + + D+C CG+C CP DA+ Sbjct: 60 SCMHCGNPACLIACPAQAYTVRSDGLVVLNRDKCTGCGLCVSACPYDAV 108 >gi|120553869|ref|YP_958220.1| electron transport complex, RnfABCDGE type, B subunit [Marinobacter aquaeolei VT8] gi|120323718|gb|ABM18033.1| electron transport complex, RnfABCDGE type, B subunit [Marinobacter aquaeolei VT8] Length = 192 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 114 DECIGC--TKCIQACPVDAILGAAKHMHTVIESECTGCDLCVEPCPVDCI 161 Score = 40.1 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 18 VEVCPVDC---FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D + + I DECI C C CPVDAI Sbjct: 91 VEPQPLDAEHGVEQAKRVAVIREDECIGCTKCIQACPVDAI 131 >gi|94309880|ref|YP_583090.1| NADH dehydrogenase subunit I [Cupriavidus metallidurans CH34] gi|115502539|sp|Q1LPV5|NUOI_RALME RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|93353732|gb|ABF07821.1| NADH:ubiquinone oxidoreductase, chain I [Cupriavidus metallidurans CH34] Length = 163 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAISIESDVRNDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI +++ Sbjct: 62 ERCIACKLCEAVCPALAISIESD 84 >gi|300245721|gb|ADJ93918.1| putative benzoate-degrading protein BamE [Clostridia bacterium enrichment culture clone BF] Length = 535 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGE----NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C +CV VC E ++P C G+C +CP AI E Sbjct: 466 CIGC--AECVAVCTYGAIEMRETRQGKKAIVNPVLCKGDGLCNAKCPTGAISLKHFTDKE 523 Query: 65 LWLKINSE 72 LW +I++ Sbjct: 524 LWSQIDAA 531 >gi|300855209|ref|YP_003780193.1| putative Iron only hydrogenase large subunit [Clostridium ljungdahlii DSM 13528] gi|300435324|gb|ADK15091.1| predicted Iron only hydrogenase large subunit [Clostridium ljungdahlii DSM 13528] Length = 448 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 8 NCILCKHTD-CVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C+ K C + CP D + +N I ++C DCG C CP I Sbjct: 84 ECVDEKGEILCQKTCPFDAIFIDNKKNCAYIDKEKCTDCGFCVDVCPTGGIMD 136 >gi|300712349|ref|YP_003738163.1| methyl-viologen-reducing hydrogenase delta subunit [Halalkalicoccus jeotgali B3] gi|299126032|gb|ADJ16371.1| methyl-viologen-reducing hydrogenase delta subunit [Halalkalicoccus jeotgali B3] Length = 712 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V++ C C +CP D E L + ++C++CG+CE CP AI Sbjct: 571 VSDACT--LTPTCSNLCPTDAIRRTEWGLEFNHEKCVNCGLCEEGCPESAI 619 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 15 TDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 C + CP D + + I P C +CG C CP A+ + ++ + Sbjct: 312 RACYDACPHDAVAKPRPDEVDIDPVACQNCGACTSACPTGAVSLREPSNERIAREVEA 369 Score = 33.6 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VT+ CI C CV P + IHP+ D G CP DAI+ D Sbjct: 195 VTDECISC--MKCVHEGPDGMVTRRP--VDIHPEA-PD-GEWTDVCPTDAIEMD 242 >gi|317048932|ref|YP_004116580.1| NADH-quinone oxidoreductase subunit I [Pantoea sp. At-9b] gi|316950549|gb|ADU70024.1| NADH-quinone oxidoreductase, chain I [Pantoea sp. At-9b] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|255314562|ref|ZP_05356145.1| putative nitrite and sulfite reductase subunit [Clostridium difficile QCD-76w55] Length = 278 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 +E C+ CK VEVCPV + L I + C +CG C C D+I+ + E G + Sbjct: 132 SELCVGCKKCAVVEVCPVKAAKLTDKGKLEIDSNLCNNCGKCIESCNFDSIE-EKESGYK 190 Query: 65 LWL 67 +++ Sbjct: 191 VYI 193 Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 10/57 (17%) Query: 18 VEVCPVDCFYEGENFLAI--------HPDECIDCGVCE--PECPVDAIKPDTEPGLE 64 V CP +C N L I + C+ C C CPV A K + LE Sbjct: 105 VGGCPNNCIKPDLNDLGIVGQRVPDYDSELCVGCKKCAVVEVCPVKAAKLTDKGKLE 161 >gi|212212190|ref|YP_002303126.1| NADH dehydrogenase subunit I [Coxiella burnetii CbuG_Q212] gi|212010600|gb|ACJ17981.1| NADH-quinone oxidoreductase chain I [Coxiella burnetii CbuG_Q212] Length = 168 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP G I +CI+CG CE CPVDAI Sbjct: 66 ERCIACKL--CEAVCPACAITIEAGPREADGSRRTTLYDIDAFKCINCGFCEEACPVDAI 123 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 66 ERCIACKLCEAVCPACAITIEAGP 89 >gi|218782910|ref|YP_002434228.1| NADH dehydrogenase (quinone) [Desulfatibacillum alkenivorans AK-01] gi|218764294|gb|ACL06760.1| NADH dehydrogenase (quinone) [Desulfatibacillum alkenivorans AK-01] Length = 618 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 +V C C C CP D + + D+CI CG+C C +AI Sbjct: 565 IVDGTCTGCGL--CARKCPQDAITGAKKETHVLDQDKCIKCGICYDACKFNAI 615 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 I C CG+C +CP DAI Sbjct: 562 HYEIVDGTCTGCGLCARKCPQDAI 585 >gi|121534032|ref|ZP_01665858.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307543|gb|EAX48459.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 205 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + CI C C +VCP + E I + C CG C CPV AI + Sbjct: 13 DKCIGCGV--CSKVCPAETITIKERKAEIDLNNCRGCGACNQRCPVYAITME 62 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 + D+CI CGVC CP + I Sbjct: 9 VVDKDKCIGCGVCSKVCPAETI 30 >gi|113867168|ref|YP_725657.1| ferredoxin [Ralstonia eutropha H16] gi|113525944|emb|CAJ92289.1| Predicted NADH:ubiquinone oxidoreductase,subunit RnfB [Ralstonia eutropha H16] Length = 269 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + PD C C +C CPVD I Sbjct: 88 CIGC--TLCIQACPVDAIAGAAKQMHTVIPDWCTGCDLCVAPCPVDCI 133 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 IDESLCIGCTLCIQACPVDAI 103 >gi|119187897|ref|XP_001244555.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Coccidioides immitis RS] Length = 232 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 131 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 188 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 189 ESP----------NAEYATETREELLYNKEKLLANGDKWE 218 >gi|39996191|ref|NP_952142.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] gi|39982956|gb|AAR34415.1| iron-sulfur cluster-binding protein [Geobacter sulfurreducens PCA] gi|298505204|gb|ADI83927.1| iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 368 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C C++ C D E I P C C C CP AI +L +K Sbjct: 195 CTGCGL--CLKACAHDAIAIIEGKAKIDPKACAGCSRCITVCPTKAITIQWNEAADLVMK 252 Query: 69 INSEYAT 75 +E+A Sbjct: 253 KMAEFAK 259 >gi|83592898|ref|YP_426650.1| NADH dehydrogenase subunit I [Rhodospirillum rubrum ATCC 11170] gi|115502542|sp|Q2RU32|NUOI_RHORT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|83575812|gb|ABC22363.1| NADH-quinone oxidoreductase, chain I [Rhodospirillum rubrum ATCC 11170] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGFCEEACPVDAI 117 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 61 ERCIACKLCEAICPAQAITIEAEP 84 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGF--CEEACPVDAIVEGPNF 123 >gi|317152026|ref|YP_004120074.1| hydrogenase, Fe-only [Desulfovibrio aespoeensis Aspo-2] gi|317152315|ref|YP_004120363.1| hydrogenase, Fe-only [Desulfovibrio aespoeensis Aspo-2] gi|316942277|gb|ADU61328.1| hydrogenase, Fe-only [Desulfovibrio aespoeensis Aspo-2] gi|316942566|gb|ADU61617.1| hydrogenase, Fe-only [Desulfovibrio aespoeensis Aspo-2] Length = 446 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 5/69 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V C C +C VC + + P CI+CG C CP AI Sbjct: 54 VDATKCEACG--ECEAVCATGAIQPINDDGIRAVVDPAACINCGQCLTHCPYGAIYEGVS 111 Query: 61 PGLELWLKI 69 E++ K+ Sbjct: 112 YVDEIFEKL 120 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 F+ + +C CG CE C AI+P + G+ Sbjct: 51 FVQVDATKCEACGECEAVCATGAIQPINDDGIR 83 >gi|270261663|ref|ZP_06189936.1| transporter [Serratia odorifera 4Rx13] gi|270045147|gb|EFA18238.1| transporter [Serratia odorifera 4Rx13] Length = 190 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 108 AYIDEANCIGC--TKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE 161 >gi|261211018|ref|ZP_05925308.1| NrfC protein [Vibrio sp. RC341] gi|260839993|gb|EEX66593.1| NrfC protein [Vibrio sp. RC341] Length = 212 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 82 SCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACPYQ 129 >gi|260550890|ref|ZP_05825096.1| ferredoxin [Acinetobacter sp. RUH2624] gi|260406017|gb|EEW99503.1| ferredoxin [Acinetobacter sp. RUH2624] Length = 87 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I C +C C+ CP+D Sbjct: 1 MALLITNDCINCD--MCLPECPNTAIFEGSKVYEIDSSRCTECVGFYEAPTCKAVCPIDC 58 Query: 55 IKPD 58 I+PD Sbjct: 59 IEPD 62 >gi|257064962|ref|YP_003144634.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792615|gb|ACV23285.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 226 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C CV VCP + E+ I +CI C C CP + E Sbjct: 58 YYLCVQCQHCADPKCVAVCPTKASQKMEDGTVQIDKSKCIGCQFCVMACPYGVRYLNEEE 117 >gi|298528242|ref|ZP_07015646.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans ASO3-1] gi|298511894|gb|EFI35796.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans ASO3-1] Length = 593 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 3/55 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 + E C C C VCP D I + C+ CG C C AI + Sbjct: 541 IEETCTGCG--MCKRVCPADAIRGTRKKPHFIDQELCVKCGSCFDSCKFGAILKE 593 >gi|239624788|ref|ZP_04667819.1| anaerobic dimethyl sulfoxide reductase [Clostridiales bacterium 1_7_47_FAA] gi|239521174|gb|EEQ61040.1| anaerobic dimethyl sulfoxide reductase [Clostridiales bacterium 1_7_47FAA] Length = 171 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C+ C++ CP C + F CI C C CP A + + L+ Sbjct: 59 ACMHCEDAPCIKGCPTGCLRKDGETGFTVYDASVCIGCHSCAMACPFGAPRFGRDGRLKK 118 >gi|223984910|ref|ZP_03635015.1| hypothetical protein HOLDEFILI_02314 [Holdemania filiformis DSM 12042] gi|223963121|gb|EEF67528.1| hypothetical protein HOLDEFILI_02314 [Holdemania filiformis DSM 12042] Length = 854 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C+ + CP+ + L I D C CG C +CP AI+ T Sbjct: 715 CRGCQVCQIEKNCPIGAAKLIDGKLQIDADLCNHCGRCVSKCPFKAIEEST 765 >gi|167770295|ref|ZP_02442348.1| hypothetical protein ANACOL_01638 [Anaerotruncus colihominis DSM 17241] gi|167667617|gb|EDS11747.1| hypothetical protein ANACOL_01638 [Anaerotruncus colihominis DSM 17241] Length = 279 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 C C CV CP + + PD+C++C C CP Sbjct: 46 CRNCG--ACVPGCPEGALSMADGRVVWDPDKCVECDACIITCP 86 >gi|157149191|ref|YP_001456510.1| hypothetical protein CKO_05031 [Citrobacter koseri ATCC BAA-895] gi|157086396|gb|ABV16074.1| hypothetical protein CKO_05031 [Citrobacter koseri ATCC BAA-895] Length = 157 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 17/53 (32%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C+ C VCP + + CI C C CP A Sbjct: 51 AFTTAAACRQCEDAPCANVCPTQAIRRDHGHIFVEQARCIGCKSCMLACPFGA 103 >gi|157145946|ref|YP_001453265.1| hypothetical protein CKO_01699 [Citrobacter koseri ATCC BAA-895] gi|157083151|gb|ABV12829.1| hypothetical protein CKO_01699 [Citrobacter koseri ATCC BAA-895] Length = 208 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK C++VCP+ + + +A+ CI C C CP Sbjct: 120 ADTCRQCKDPQCMKVCPIGAITWKQDDGCIAVDHKRCIGCSACTTACP 167 >gi|89895807|ref|YP_519294.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219670238|ref|YP_002460673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] gi|89335255|dbj|BAE84850.1| putative oxidoreductase iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219540498|gb|ACL22237.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfitobacterium hafniense DCB-2] Length = 207 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAI-HPDECIDCGVCEPECPV 52 NC C + CV+ CPV + E+ + I D+CI C C CP Sbjct: 64 NCQHCANPACVKACPVGATYQREEDGVVIQDYDQCIGCRYCMVACPY 110 >gi|283786349|ref|YP_003366214.1| NADH-quinone oxidoreductase subunit I [Citrobacter rodentium ICC168] gi|282949803|emb|CBG89426.1| NADH-quinone oxidoreductase subunit I [Citrobacter rodentium ICC168] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 --PDTEPGL 63 PD E G Sbjct: 116 LTPDFELGE 124 >gi|260768580|ref|ZP_05877514.1| electron transport protein hydN [Vibrio furnissii CIP 102972] gi|260616610|gb|EEX41795.1| electron transport protein hydN [Vibrio furnissii CIP 102972] gi|315180289|gb|ADT87203.1| electron transport protein (FeS senter) from formate to hydrogen [Vibrio furnissii NCTC 11218] Length = 181 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V T C C C +VCP + + ++ + CI C C CP A Sbjct: 50 AHVTTPVMCRQCDDAPCAQVCPNNAIVHEDGYIKVIQSRCIGCKTCAIACPYGA 103 >gi|88601754|ref|YP_501932.1| 2-oxoacid:acceptor oxidoreductase subunit delta, pyruvate/2-ketoisovalerate [Methanospirillum hungatei JF-1] gi|88187216|gb|ABD40213.1| pyruvate ferredoxin oxidoreductase, delta subunit [Methanospirillum hungatei JF-1] Length = 85 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C C C VCP C G+ D C CG+C ECP AI +TE Sbjct: 32 DKCTSCG--MCQLVCPEGCILTGDKQFNPDYDFCKGCGLCAQECPAKAITMETEE 84 >gi|58584728|ref|YP_198301.1| NADH dehydrogenase subunit I [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75507969|sp|Q5GSG5|NUOI_WOLTR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|58419044|gb|AAW71059.1| NADH:ubiquinone oxidoreductase chain I [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 160 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 59 ERCIACKL--CEVICPAQAIVIEAEEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 115 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 59 ERCIACKLCEVICPAQAIVIEAEERED 85 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 100 CIYCGL--CQEACPVDAIVEGPNF 121 >gi|89074823|ref|ZP_01161277.1| electron transport protein (FeS senter) from formate to hydrogen [Photobacterium sp. SKA34] gi|89049398|gb|EAR54960.1| electron transport protein (FeS senter) from formate to hydrogen [Photobacterium sp. SKA34] Length = 182 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V T C C C +VCP + + F+ + CI C C CP A Sbjct: 50 AHVTTPVMCRQCDDAPCAQVCPNNAIVLEDGFVKVIQSRCIGCKTCVIACPYGA 103 >gi|305666617|ref|YP_003862904.1| ferredoxin [Maribacter sp. HTCC2170] gi|88708888|gb|EAR01123.1| ferredoxin [Maribacter sp. HTCC2170] Length = 298 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C + C ++CP D N I PD C C C CP +I Sbjct: 221 ACIGC--SKCEDICPKDAIDMDNNLAYIDPDLCTLCRKCVEVCPTHSI 266 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 13 KHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 DCV VC D Y E I D+C CG C CP Sbjct: 145 GDGDCVNVCDFDAMYMDEKTGLPVIITDKCTSCGACVKACP 185 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 21/77 (27%) Query: 1 MTYVVTENCILCKHTDCVEVCP-----------------VDCFYEGENFLAIHP--DECI 41 + ++T+ C C CV+ CP V C E + +A CI Sbjct: 166 LPVIITDKCTSCG--ACVKACPRHILEMRPRNKRDLKIFVGCLNEDKGGIAKRACDVACI 223 Query: 42 DCGVCEPECPVDAIKPD 58 C CE CP DAI D Sbjct: 224 GCSKCEDICPKDAIDMD 240 >gi|325280075|ref|YP_004252617.1| electron transport complex, RnfABCDGE type, B subunit [Odoribacter splanchnicus DSM 20712] gi|324311884|gb|ADY32437.1| electron transport complex, RnfABCDGE type, B subunit [Odoribacter splanchnicus DSM 20712] Length = 330 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 C+ C CV CP D + L + D+C+ CG C CP + I+ Sbjct: 142 CLGCGD--CVAACPFDAIHMDSTTLLPVVDDDKCVACGACVKACPRNIIE 189 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 2/50 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CI C C + CP D N I +C C C CP AI Sbjct: 220 ACIGCG--KCAKECPFDAITVENNLAYIDYSKCRLCRKCVGVCPTGAIHE 267 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 21/87 (24%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA--------IHPDE-----------CI 41 + V + C+ C CV+ CP + ++ D+ CI Sbjct: 165 LPVVDDDKCVACG--ACVKACPRNIIELRNKGPKDRRVFVSCVNKDKGGVARKACKAACI 222 Query: 42 DCGVCEPECPVDAIKPDTEPGLELWLK 68 CG C ECP DAI + + K Sbjct: 223 GCGKCAKECPFDAITVENNLAYIDYSK 249 Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 40 CIDCGVCEPECPVDAIKPDT 59 C+ CG C CP DAI D+ Sbjct: 142 CLGCGDCVAACPFDAIHMDS 161 >gi|291525395|emb|CBK90982.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Eubacterium rectale DSM 17629] Length = 289 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C CV+ C + + I D+C +C C CP DA Sbjct: 165 DDCIQCGV--CVKACREGALSMEDGRIVIDRDKCNNCARCVKSCPTDA 210 Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C++ D +G + D+CI CGVC C A+ + Sbjct: 143 NCLKAEENDVGIKGGMTVECSHDDCIQCGVCVKACREGALSMED 186 >gi|317152862|ref|YP_004120910.1| putative ferredoxin [Desulfovibrio aespoeensis Aspo-2] gi|316943113|gb|ADU62164.1| putative ferredoxin [Desulfovibrio aespoeensis Aspo-2] Length = 266 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V+E C C C E CP+ + + I ++CI C C CP +A Sbjct: 191 VSEKCAQCGV--CAETCPMGAI-DLNDSAVIDKEKCITCCACIKICPQEA 237 >gi|262193778|ref|YP_003264987.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Haliangium ochraceum DSM 14365] gi|262077125|gb|ACY13094.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Haliangium ochraceum DSM 14365] Length = 445 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 7 ENCILCKHTDCVEVCPV-DCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI CV CP D G L I+P C+ G C CPVDAI Sbjct: 58 DICIG--SAACVNACPEKDVIGLVHGRAQL-INPLACVGHGACAAACPVDAI 106 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 8/17 (47%) Query: 35 IHPDECIDCGVCEPECP 51 I PD CI C CP Sbjct: 55 IDPDICIGSAACVNACP 71 >gi|188533354|ref|YP_001907151.1| NADH dehydrogenase subunit I [Erwinia tasmaniensis Et1/99] gi|259907934|ref|YP_002648290.1| NADH dehydrogenase subunit I [Erwinia pyrifoliae Ep1/96] gi|292488836|ref|YP_003531723.1| NADH dehydrogenase I subunit I [Erwinia amylovora CFBP1430] gi|292899987|ref|YP_003539356.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC 49946] gi|226737392|sp|B2VIN2|NUOI_ERWT9 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|188028396|emb|CAO96257.1| NADH dehydrogenase I subunit I [Erwinia tasmaniensis Et1/99] gi|224963556|emb|CAX55046.1| NADH dehydrogenase I subunit I [Erwinia pyrifoliae Ep1/96] gi|283477815|emb|CAY73731.1| NADH dehydrogenase I chain I [Erwinia pyrifoliae DSM 12163] gi|291199835|emb|CBJ46959.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC 49946] gi|291554270|emb|CBA21585.1| NADH dehydrogenase I chain I [Erwinia amylovora CFBP1430] gi|310768158|gb|ADP13108.1| NADH dehydrogenase subunit I [Erwinia sp. Ejp617] gi|312172996|emb|CBX81251.1| NADH dehydrogenase I chain I [Erwinia amylovora ATCC BAA-2158] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETADGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|168235271|ref|ZP_02660329.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738110|ref|YP_002116600.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713612|gb|ACF92833.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291578|gb|EDY30930.1| protein AegA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 157 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQALRRDRGHIFVTPSRCIGCKSCMLACPFGA 103 >gi|167945763|ref|ZP_02532837.1| iron-sulfur cluster-binding protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 164 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ++C+ C+ CV VCP Y E + + D+CI C C CP + D Sbjct: 66 TYHFPKSCLHCEDPPCVPVCPTGASYKREDNGVVLVDYDKCIGCKYCSWACPYGVREFDE 125 Query: 60 EP 61 + Sbjct: 126 KE 127 >gi|167750764|ref|ZP_02422891.1| hypothetical protein EUBSIR_01742 [Eubacterium siraeum DSM 15702] gi|167656199|gb|EDS00329.1| hypothetical protein EUBSIR_01742 [Eubacterium siraeum DSM 15702] Length = 597 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 +TY + + C C T C CPV I +CI CG C +C AI + Sbjct: 540 LTYKIIDLKCKGC--TACARGCPVGAISGTVKQPHSIDTAKCIKCGACMAKCKFGAIIKE 597 >gi|167549680|ref|ZP_02343439.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|198242928|ref|YP_002216391.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937444|gb|ACH74777.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205325199|gb|EDZ13038.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|326624142|gb|EGE30487.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEY 125 >gi|83592762|ref|YP_426514.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] gi|399277|sp|P31894|COOF_RHORU RecName: Full=Iron-sulfur protein gi|1498747|gb|AAC45122.1| iron sulfur protein [Rhodospirillum rubrum] gi|83575676|gb|ABC22227.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] Length = 190 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 19/47 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C+ C CP + + + I CI C +C CP AI Sbjct: 65 CRQCEDAPCTFACPTGACRQADGQVQIVEQHCIGCKLCVMVCPFGAI 111 >gi|113970402|ref|YP_734195.1| electron transport complex protein RnfB [Shewanella sp. MR-4] gi|123324999|sp|Q0HIH9|RNFB_SHESM RecName: Full=Electron transport complex protein rnfB gi|113885086|gb|ABI39138.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. MR-4] Length = 193 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTAD-CTGCDLCVEPCPVDCI 159 >gi|327291045|ref|XP_003230232.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [Anolis carolinensis] Length = 208 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 107 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 163 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 107 ERCIACKLCEAICPAQAITIEAEPRAD 133 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 148 CIYCGF--CQEACPVDAIVEGPNF 169 >gi|268324765|emb|CBH38353.1| conserved hypothetical protein, 4Fe-4S binding domain family [uncultured archaeon] Length = 895 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 19/84 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL---------AIH--------PDECIDCGVC 46 V + C+ C CV+VCPV+ E + I D CI CG C Sbjct: 811 VDEQICVGCGV--CVDVCPVEAIELTEELVPVVTFGVATVISGMKKVAKVGDGCIGCGSC 868 Query: 47 EPECPVDAIKPDTEPGLELWLKIN 70 CP A+ +L+ +++ Sbjct: 869 ASYCPSGAMSLKHFRDRQLYAQLD 892 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + C+ CGVC CPV+AI+ Sbjct: 810 VVDEQICVGCGVCVDVCPVEAIE 832 >gi|255526336|ref|ZP_05393251.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296187009|ref|ZP_06855409.1| putative dimethylsulfoxide reductase, chain B [Clostridium carboxidivorans P7] gi|255509984|gb|EET86309.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|296048447|gb|EFG87881.1| putative dimethylsulfoxide reductase, chain B [Clostridium carboxidivorans P7] Length = 183 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVD 53 Y ++ C C + CV+ CP + + + I+ ++C+ C C CP Sbjct: 52 YFISMACNHCANPACVKACPTGACNKRKEDGIVVINKEKCVGCRKCVKACPYG 104 >gi|242309592|ref|ZP_04808747.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] gi|239523593|gb|EEQ63459.1| 4Fe-4S ferredoxin [Helicobacter pullorum MIT 98-5489] Length = 189 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C +C+HT CV VCP + E+ + I ++C+ C C CP +A Sbjct: 58 SCEMCEHTPCVTVCPTHASFMDEDGIVDIDANKCVGCLYCVVACPYNA 105 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 23/65 (35%), Gaps = 15/65 (23%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG----------VCEPECPVDA-IKP 57 C+ C + CV CP + Y PD+C C C CP DA I Sbjct: 91 CVGCLY--CVVACPYNARYVNPETKV--PDKCNFCKHTHLKQYGEPACVAVCPTDALIFG 146 Query: 58 DTEPG 62 D + Sbjct: 147 DLDDP 151 >gi|206890111|ref|YP_002249095.1| iron-sulfur protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742049|gb|ACI21106.1| iron-sulfur protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 322 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPD 58 V + C+ C C C VD F + E + +P C+ C C CP D + Sbjct: 129 VKKQCMHCIDAACQSACFVDAFKKTEQGAVLYNPSLCVGCRYCMIACPFDIPAYE 183 >gi|90578220|ref|ZP_01234031.1| electron transport protein (FeS senter) from formate to hydrogen [Vibrio angustum S14] gi|90441306|gb|EAS66486.1| electron transport protein (FeS senter) from formate to hydrogen [Vibrio angustum S14] Length = 182 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V T C C C +VCP + + F+ + CI C C CP A Sbjct: 50 AHVTTPVMCRQCDDAPCAQVCPNNAIVLEDGFVKVIQSRCIGCKTCVIACPYGA 103 >gi|304319939|ref|YP_003853582.1| NADH dehydrogenase I, I subunit [Parvularcula bermudensis HTCC2503] gi|303298842|gb|ADM08441.1| NADH dehydrogenase I, I subunit [Parvularcula bermudensis HTCC2503] Length = 162 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAEERADGSRRTTRYDIDMVKCIYCGLCQESCPVDAI 117 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 61 ERCIACKLCEAVCPAQAITIEAEERAD 87 >gi|66818078|ref|XP_642732.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium discoideum AX4] gi|60470829|gb|EAL68801.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium discoideum AX4] Length = 210 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRQDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 40.1 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAICPAQAITIEAEPRQD 135 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|325960233|ref|YP_004291699.1| helix-turn-helix domain-containing protein [Methanobacterium sp. AL-21] gi|325331665|gb|ADZ10727.1| helix-turn-helix domain protein [Methanobacterium sp. AL-21] Length = 149 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V ++CI C CV+ C +D + I D C C +C +CP ++I Sbjct: 96 VKDSCIGCG--ICVDTCLIDAIVLDDLKAHIDSDICCGCQICAEKCPTNSI 144 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 37 PDECIDCGVCEPECPVDAIKPDT 59 D CI CG+C C +DAI D Sbjct: 97 KDSCIGCGICVDTCLIDAIVLDD 119 >gi|221234957|ref|YP_002517393.1| NADH dehydrogenase subunit I [Caulobacter crescentus NA1000] gi|220964129|gb|ACL95485.1| NADH-quinone oxidoreductase chain I [Caulobacter crescentus NA1000] Length = 193 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 92 ERCIACKL--CEAICPAQAITIEAEPREDGSRRTTRYDIDMVKCIYCGLCQEACPVDAIV 149 Query: 57 --PDTEPGLELWLKI 69 P+TE E ++ Sbjct: 150 EGPNTEFATETREEL 164 >gi|221068920|ref|ZP_03545025.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] gi|220713943|gb|EED69311.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Comamonas testosteroni KF-1] Length = 86 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y GE F I P +C +C C CPV Sbjct: 1 MALMITDECINCDV--CEPECPNDAIYMGEEFYEIDPHKCTECVGHFDEPQCVQICPVAC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I P +++ + ++ +T K Sbjct: 59 I-----PVNPEYIESHEVLFKKYEQLTHAK 83 >gi|188591105|ref|YP_001795705.1| 4fe-4S ferredoxin-type protein [Cupriavidus taiwanensis LMG 19424] gi|170937999|emb|CAP62983.1| putative 4Fe-4S ferredoxin-type protein [Cupriavidus taiwanensis LMG 19424] Length = 86 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + G I P++C +C C+ CPV Sbjct: 1 MALMITDDCINCDV--CEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVAC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|85059572|ref|YP_455274.1| NADH dehydrogenase subunit I [Sodalis glossinidius str. 'morsitans'] gi|110287775|sp|Q2NSK6|NUOI_SODGM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|84780092|dbj|BAE74869.1| NADH dehydrogenase I subunit I [Sodalis glossinidius str. 'morsitans'] Length = 180 Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|332750133|gb|EGJ80544.1| iron-sulfur protein [Shigella flexneri 4343-70] Length = 134 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 34 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 82 >gi|325288372|ref|YP_004264553.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophobotulus glycolicus DSM 8271] gi|324963773|gb|ADY54552.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophobotulus glycolicus DSM 8271] Length = 574 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VT +C+ C C+++ CP C + + I+ +C+ CG+C+ C AIK + Sbjct: 520 FVTSDCVGC--MQCLKLGCP--CIVKENKRVVINSTQCVGCGLCQTVCTRHAIKKE 571 >gi|302343175|ref|YP_003807704.1| electron transport complex, RnfABCDGE type, B subunit [Desulfarculus baarsii DSM 2075] gi|301639788|gb|ADK85110.1| electron transport complex, RnfABCDGE type, B subunit [Desulfarculus baarsii DSM 2075] Length = 695 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 10 ILC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 I C C + CP G + L I P C CG CE CP + I Sbjct: 136 IGCLGLGTCAKACPFGAITIGADNLPHIDPSLCTGCGTCERVCPKNIIH 184 >gi|295110158|emb|CBL24111.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Ruminococcus obeum A2-162] Length = 623 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++ E CI C C + CP I + CI CG C+ C DAI + Sbjct: 568 HINPEFCIGCG--KCAKNCPAAAISGKIKHPYHIDNELCIKCGTCKDNCNFDAIYVE 622 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 13/25 (52%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 I+P+ CI CG C CP AI Sbjct: 565 RQFHINPEFCIGCGKCAKNCPAAAI 589 >gi|251789756|ref|YP_003004477.1| RnfABCDGE type electron transport complex subunit B [Dickeya zeae Ech1591] gi|247538377|gb|ACT06998.1| electron transport complex, RnfABCDGE type, B subunit [Dickeya zeae Ech1591] Length = 196 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 AWIDEENCIGC--TKCIQACPVDAIIGSTRAVHTVIRDLCTGCNLCVAPCPTDCIE 162 Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAI 55 +E P+D I + CI C C CPVDAI Sbjct: 91 IEPQPLDAGTPQKPEPQVAWIDEENCIGCTKCIQACPVDAI 131 >gi|229520552|ref|ZP_04409976.1| iron-sulfur cluster-binding protein [Vibrio cholerae TM 11079-80] gi|229342376|gb|EEO07370.1| iron-sulfur cluster-binding protein [Vibrio cholerae TM 11079-80] Length = 553 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 T +C LC CV VCP + + L +C+ CG+C CP A Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQA 465 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLK 68 CV+ CP EG + + I+P C G C CP +AI + +++ Sbjct: 189 CVDACPAGALSSEGTDQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIE 247 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDSDLCAHSSRGVKGCERCVDACPAGALSSEGTDQTGHRIQIN 213 >gi|258515910|ref|YP_003192132.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779615|gb|ACV63509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 95 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEG----ENFLAI-HPDECIDCGVCEPECPVDAI 55 M V T C C CV +CP + + I +P CI CG C CP AI Sbjct: 24 MA-VNTRLCKAC--WKCVSICPRGVIGKIRFLFHRHIYILNPGNCIGCGACAKACPEGAI 80 Query: 56 KPDTEPG 62 PG Sbjct: 81 IVLKRPG 87 >gi|223040943|ref|ZP_03611205.1| sulfur reductase FeS subunit [Campylobacter rectus RM3267] gi|222877787|gb|EEF12906.1| sulfur reductase FeS subunit [Campylobacter rectus RM3267] Length = 189 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 + +C +C CV VCP ++ + L + C+ C C CP DA Sbjct: 54 FIRHSCAMCDDAPCVSVCPTGASFQTADGLVLLDRSTCVSCKYCILACPYDA 105 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 14/56 (25%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC----------GVCEPECPVDA 54 C+ CK+ C+ CP D Y I D+C C C CP +A Sbjct: 91 CVSCKY--CILACPYDARYVEPKTGEI--DKCTFCFETRVSLGEKPACVTVCPTNA 142 >gi|218779916|ref|YP_002431234.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761300|gb|ACL03766.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 289 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +T++CI C +CVEVC ++ E + I D C CG C C AIK Sbjct: 219 ITDDCIACG--ECVEVCYLNAL-EIVDGKVIRKDICRMCGRCAAACKQHAIK 267 >gi|91787512|ref|YP_548464.1| benzoyl-CoA oxygenase, component A [Polaromonas sp. JS666] gi|91696737|gb|ABE43566.1| benzoyl-CoA oxygenase, component A [Polaromonas sp. JS666] Length = 426 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 10/63 (15%) Query: 1 MT--YVVTEN------CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 MT +V+ ++ CI C C +CPV + ++C C C CP Sbjct: 3 MTEIHVIKQHLIDPEICIRCN--TCEAICPVQAITHDSRNYVVDAEKCNLCMACISPCPT 60 Query: 53 DAI 55 +I Sbjct: 61 GSI 63 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI D+ Sbjct: 14 IDPEICIRCNTCEAICPVQAITHDSR 39 >gi|77164682|ref|YP_343207.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus oceani ATCC 19707] gi|254434195|ref|ZP_05047703.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Nitrosococcus oceani AFC27] gi|76882996|gb|ABA57677.1| Electron transport complex, RnfABCDGE type, B subunit [Nitrosococcus oceani ATCC 19707] gi|207090528|gb|EDZ67799.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Nitrosococcus oceani AFC27] Length = 209 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 14/91 (15%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DTE 60 V+ EN CI C T C++ CPVD L + EC C +C CPVD I+ Sbjct: 106 VIDENRCIGC--TLCIQACPVDAILGAPKQLHTVITAECTGCELCVAPCPVDCIEMVPVA 163 Query: 61 PGLELWLKINSEYATQWPNITTKKESLPSAA 91 P W +WP T LP AA Sbjct: 164 PEPGTW---------KWPFPETTHPPLPIAA 185 >gi|14590750|ref|NP_142820.1| hypothetical protein PH0893 [Pyrococcus horikoshii OT3] gi|3257304|dbj|BAA29987.1| 161aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 161 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C+ C VCP++ + N + D+CI C +C CP+ + D Sbjct: 61 CLQCEDAPCELVCPMEAIHMEGNIRIVDDDKCIRCKMCTLVCPIGGVLYD 110 >gi|301027423|ref|ZP_07190760.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300394931|gb|EFJ78469.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] Length = 162 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVSACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|254786925|ref|YP_003074354.1| electron transport complex, RnfABCDGE type, B subunit [Teredinibacter turnerae T7901] gi|237685549|gb|ACR12813.1| electron transport complex, RnfABCDGE type, B subunit [Teredinibacter turnerae T7901] Length = 200 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + EC C +C CPVD I+ Sbjct: 115 AFIREDECIGC--TKCIQACPVDAILGAAKQMHTVIGSECTGCDLCVEPCPVDCIE 168 >gi|217966957|ref|YP_002352463.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] gi|217336056|gb|ACK41849.1| NADH dehydrogenase (quinone) [Dictyoglomus turgidum DSM 6724] Length = 624 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C C CP + E I ++C CGVC +C AI+ Sbjct: 569 YVINPELCKGCGL--CARFCPQNAISGERGKPYVIDQEKCAKCGVCVEKCKFKAIE 622 Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +CP I+P+ C CG+C CP +AI + Sbjct: 557 ICPSG-MCTAFKRYVINPELCKGCGLCARFCPQNAISGE 594 >gi|254410698|ref|ZP_05024476.1| 4Fe-4S binding domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182053|gb|EDX77039.1| 4Fe-4S binding domain protein [Microcoleus chthonoplastes PCC 7420] Length = 537 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M Y ++++C C C CP +N I P+ C +C G C CP+ + Sbjct: 1 MAYKLSQSCTGCD--ICRTQCPTGAIKVKDNQTWIDPNLCNNCEGYYPEPQCVIHCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PVP 61 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 3/39 (7%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C C +C +CP AIK + W+ N Sbjct: 1 MAYKLSQSCTGCDICRTQCPTGAIKVKDN---QTWIDPN 36 >gi|218777911|ref|YP_002429229.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218759295|gb|ACL01761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 271 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 1 MTYVVTENCILCKHTDCV-EVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +T VT+ C+ C C+ ++C V+ + I D C CG C CP +AI+ + Sbjct: 195 LTVAVTDKCVGCG--ACINDICFVNAIRLVDGKAEISGD-CRGCGRCVEICPSEAIRVNF 251 Query: 60 EPGLELWLKINS 71 G + IN Sbjct: 252 HGGASVEGAINR 263 >gi|115751579|ref|XP_792622.2| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase), partial [Strongylocentrotus purpuratus] gi|115932140|ref|XP_001191284.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase), partial [Strongylocentrotus purpuratus] Length = 195 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 94 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 150 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 94 ERCIACKLCEAVCPAQAITIEAEPRAD 120 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 135 CIYCGF--CQEACPVDAIVEGPNF 156 >gi|255315823|ref|ZP_05357406.1| putative nitroreductase [Clostridium difficile QCD-76w55] gi|260684650|ref|YP_003215935.1| putative nitroreductase [Clostridium difficile CD196] gi|260688308|ref|YP_003219442.1| putative nitroreductase [Clostridium difficile R20291] gi|260210813|emb|CBA65837.1| putative nitroreductase [Clostridium difficile CD196] gi|260214325|emb|CBE06677.1| putative nitroreductase [Clostridium difficile R20291] Length = 260 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ I +C+ CG C CP AI Sbjct: 14 ELCIGCGL--CKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAI 60 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + + CI CG+C+ +CPV+ I + + Sbjct: 9 IEVDKELCIGCGLCKNDCPVNNIIIENKKS 38 >gi|2127962|pir||E64448 heterodisulfide reductase (EC 1.-.-.-) - Methanococcus jannaschii Length = 460 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV C C C VCP++ E G I D CI CG Sbjct: 42 YVDENICTGCG--ACAAVCPIEVPNEFDLGLGTRKAIYVPFAQAVPLVYTIDMDHCIRCG 99 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C AI+ D +P Sbjct: 100 LCEKACGPGAIRYDQKPEE 118 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECIDCGVCEPECPVDA 54 V + C C C ++CP + E + L ++ C CG C CP A Sbjct: 379 AVVDEDVCGGC--QVCAKMCPYNAITYVEKDGHLVAQVNDVACKGCGSCAGACPSGA 433 Score = 33.6 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 13/30 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + D C C VC CP +AI + G Sbjct: 380 VVDEDVCGGCQVCAKMCPYNAITYVEKDGH 409 >gi|313835282|gb|EFS72996.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Propionibacterium acnes HL037PA2] gi|314928232|gb|EFS92063.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Propionibacterium acnes HL044PA1] gi|314970063|gb|EFT14161.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Propionibacterium acnes HL037PA3] gi|328905958|gb|EGG25734.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Propionibacterium sp. P08] Length = 605 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 2 TYVVTENCILCKHT----DCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C + C CP D + + + D+CI C C +CPV AI Sbjct: 502 AHFEAGRCLSCGNCFECDGCYGSCPEDAIIKLGKGHRYEFNYDKCIGCATCFDQCPVHAI 561 Query: 56 K 56 + Sbjct: 562 E 562 >gi|219851773|ref|YP_002466205.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] gi|219546032|gb|ACL16482.1| nitrite and sulphite reductase 4Fe-4S region [Methanosphaerula palustris E1-9c] Length = 288 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C CV +CP + ++ D+CI+C +C CP Sbjct: 168 CNDCGL--CVNICPTGAISREGSSYSLDLDKCINCSICTASCPTG 210 Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 8/49 (16%) Query: 18 VEVCPVDCFYEGEN----FLAIHPD----ECIDCGVCEPECPVDAIKPD 58 V CP +C EN I P C DCG+C CP AI + Sbjct: 138 VTGCPHNCAKATENDIGVMGGIIPGWLEFGCNDCGLCVNICPTGAISRE 186 >gi|254439636|ref|ZP_05053130.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 307] gi|198255082|gb|EDY79396.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 307] Length = 477 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 5 VTEN-----CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +TE+ CI C CV VCPV +G+ ECI CG+C C K Sbjct: 250 ITEDTPQGDCIDC--MACVNVCPVGIDIRDGQQM------ECITCGLCIDACDDIMAKIG 301 Query: 59 TEPGLELWLKINSEYATQWPNITTK 83 GL +L ++ E A + T + Sbjct: 302 KPRGLVDYLSLDDEEAERNAQPTKR 326 >gi|184158816|ref|YP_001847155.1| ferredoxin [Acinetobacter baumannii ACICU] gi|332875186|ref|ZP_08443019.1| ferredoxin [Acinetobacter baumannii 6014059] gi|183210410|gb|ACC57808.1| Ferredoxin [Acinetobacter baumannii ACICU] gi|322507371|gb|ADX02825.1| Putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii 1656-2] gi|323518731|gb|ADX93112.1| ferredoxin [Acinetobacter baumannii TCDC-AB0715] gi|332736630|gb|EGJ67624.1| ferredoxin [Acinetobacter baumannii 6014059] Length = 87 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITNDCINCD--MCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKVVCPIDC 58 Query: 55 IKPD------TEPGLELWLKIN 70 IK D E LE + +N Sbjct: 59 IKQDPVHIENKEQLLEKFKDLN 80 >gi|153824794|ref|ZP_01977461.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] gi|149741512|gb|EDM55542.1| iron-sulfur cluster-binding protein [Vibrio cholerae MZO-2] Length = 553 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 T +C LC CV VCP + + L +C+ CG+C CP A Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQA 465 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLK 68 CV+ CP EG + + I+P C G C CP +AI + +++ Sbjct: 189 CVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIE 247 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + PD C C C CP A+ + ++IN Sbjct: 166 PKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|91786836|ref|YP_547788.1| 4Fe-4S ferredoxin [Polaromonas sp. JS666] gi|91696061|gb|ABE42890.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Polaromonas sp. JS666] Length = 695 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V T+ C LC CV CP + L C+ CG+C CP DAI Sbjct: 560 VNTDTCTLCL--SCVSACPASALQDNPERPQLKFIEKNCVQCGLCAVTCPEDAI 611 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 10 ILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + C C+++C + + ++P+ CI CG C CP A+ E Sbjct: 307 VGCN--ACIDICSAGAVSSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRASEQ 362 Score = 40.9 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 L ++ D C C C CP A++ + E +++ N Sbjct: 558 LVVNTDTCTLCLSCVSACPASALQDNPERPQLKFIEKN 595 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 9/21 (42%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D C C C CP AI Sbjct: 177 IDLDLCTRCNACVAVCPEGAI 197 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 6/58 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGL 63 + C C CV VCP + + +C C C V AI + E Sbjct: 180 DLCTRCN--ACVAVCPEGAI---DLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQA 232 >gi|86357247|ref|YP_469139.1| NADH dehydrogenase subunit I [Rhizobium etli CFN 42] gi|190891295|ref|YP_001977837.1| NADH-ubiquinone oxidoreductase, chain I [Rhizobium etli CIAT 652] gi|218462497|ref|ZP_03502588.1| NADH dehydrogenase subunit I [Rhizobium etli Kim 5] gi|218509388|ref|ZP_03507266.1| NADH dehydrogenase subunit I [Rhizobium etli Brasil 5] gi|115502507|sp|Q2K9S4|NUOI1_RHIEC RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|86281349|gb|ABC90412.1| NADH-ubiquinone oxidoreductase chain I protein [Rhizobium etli CFN 42] gi|190696574|gb|ACE90659.1| NADH-ubiquinone oxidoreductase protein, chain I [Rhizobium etli CIAT 652] gi|327188496|gb|EGE55710.1| NADH dehydrogenase subunit I [Rhizobium etli CNPAF512] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|49475650|ref|YP_033691.1| NADH dehydrogenase subunit I [Bartonella henselae str. Houston-1] gi|81696159|sp|Q6G396|NUOI_BARHE RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|49238457|emb|CAF27685.1| NADH dehydrogenase I, I subunit [Bartonella henselae str. Houston-1] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPV+AI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVEAI 118 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 61 ERCIACKLCEAICPAQAITIEAGP 84 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPV+ EG NF Sbjct: 103 CIYCGF--CQEACPVEAIVEGPNF 124 >gi|16761246|ref|NP_456863.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765648|ref|NP_461263.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141058|ref|NP_804400.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412782|ref|YP_149857.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180891|ref|YP_217308.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612951|ref|YP_001586916.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167994669|ref|ZP_02575760.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229690|ref|ZP_02654748.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237338|ref|ZP_02662396.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242439|ref|ZP_02667371.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261663|ref|ZP_02683636.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465976|ref|ZP_02699846.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168817949|ref|ZP_02829949.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446441|ref|YP_002041581.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451795|ref|YP_002046374.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469216|ref|ZP_03075200.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738262|ref|YP_002115390.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249761|ref|YP_002147279.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263656|ref|ZP_03163730.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361716|ref|YP_002141352.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200386777|ref|ZP_03213389.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929042|ref|ZP_03220185.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353436|ref|YP_002227237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857739|ref|YP_002244390.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213028651|ref|ZP_03343098.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052937|ref|ZP_03345815.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419033|ref|ZP_03352099.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213427017|ref|ZP_03359767.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580776|ref|ZP_03362602.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612295|ref|ZP_03370121.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|224583193|ref|YP_002636991.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912400|ref|ZP_04656237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|75505657|sp|Q57M35|NUOI_SALCH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81678159|sp|Q5PN58|NUOI_SALPA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81706883|sp|Q7CQ51|NUOI_SALTY RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81766252|sp|Q8XFD5|NUOI_SALTI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|25282717|pir||AG0796 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420862|gb|AAL21222.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503545|emb|CAD07553.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhi] gi|29136684|gb|AAO68249.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127039|gb|AAV76545.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62128524|gb|AAX66227.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362315|gb|ABX66083.1| hypothetical protein SPAB_00657 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405104|gb|ACF65326.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410099|gb|ACF70318.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455580|gb|EDX44419.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713764|gb|ACF92985.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631186|gb|EDX49746.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093192|emb|CAR58636.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213464|gb|ACH50861.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241911|gb|EDY24531.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289600|gb|EDY28963.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603875|gb|EDZ02420.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321586|gb|EDZ06785.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273217|emb|CAR38180.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205327493|gb|EDZ14257.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335833|gb|EDZ22597.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338317|gb|EDZ25081.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205345035|gb|EDZ31799.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349680|gb|EDZ36311.1| NADH-quinone oxidoreductase, I subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709542|emb|CAR33887.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467720|gb|ACN45550.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247527|emb|CBG25354.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994416|gb|ACY89301.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158879|emb|CBW18392.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913312|dbj|BAJ37286.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086755|emb|CBY96527.1| NADH dehydrogenase I chain I [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222977|gb|EFX48048.1| NADH-ubiquinone oxidoreductase chain I [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617067|gb|EFY13973.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617627|gb|EFY14526.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624743|gb|EFY21572.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630292|gb|EFY27062.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634473|gb|EFY31206.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639183|gb|EFY35875.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640046|gb|EFY36713.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645733|gb|EFY42257.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651508|gb|EFY47883.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656068|gb|EFY52367.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659421|gb|EFY55668.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665881|gb|EFY62064.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669879|gb|EFY66020.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673865|gb|EFY69962.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678623|gb|EFY74679.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683581|gb|EFY79595.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687657|gb|EFY83627.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715370|gb|EFZ06941.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323193509|gb|EFZ78714.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198414|gb|EFZ83516.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201928|gb|EFZ86990.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208534|gb|EFZ93473.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209757|gb|EFZ94681.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218293|gb|EGA03003.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222949|gb|EGA07298.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227385|gb|EGA11550.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232288|gb|EGA16391.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235678|gb|EGA19762.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241161|gb|EGA25197.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244903|gb|EGA28905.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250022|gb|EGA33916.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251634|gb|EGA35502.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254945|gb|EGA38736.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260325|gb|EGA43944.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268099|gb|EGA51576.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270808|gb|EGA54246.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989254|gb|AEF08237.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEY 125 >gi|121603741|ref|YP_981070.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120592710|gb|ABM36149.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polaromonas naphthalenivorans CJ2] Length = 710 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 I C + C++VC ++ I +P+ C+ CG C CP AI E Sbjct: 314 IGC--SACIDVCSASAISSDKSRQQIKVNPNLCVGCGACTTVCPSGAISYAYPRPAEQ 369 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDA 54 + C LC CV CP + + L + C+ CG+C CP +A Sbjct: 578 DACTLCL--SCVNACPASALQDNPDSLQLKFIEKNCVQCGLCVKTCPENA 625 Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 LAI D C C C CP A++ + + +++ N Sbjct: 572 GLAIDKDACTLCLSCVNACPASALQDNPDSLQLKFIEKN 610 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 11/28 (39%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 I D C C C CP AI D + Sbjct: 191 IDLDLCTRCNACLSACPEGAIGFDYQID 218 >gi|295106485|emb|CBL04028.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 190 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + C C + +CV VCP Y E+ + + +CI C C CP D Sbjct: 53 YYLPVACQHCDNPECVSVCPTGASYRREDGVVLVDHSKCIGCQYCVMACPYGVRAYDE 110 >gi|257064384|ref|YP_003144056.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256792037|gb|ACV22707.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 205 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C C++ +CV+VCP + + + I +CI C C CP + E Sbjct: 59 YFLNVQCQHCENPECVKVCPTEASRKMPDGTVQIDKAKCIGCQFCVMSCPYGVRYLNEEE 118 Query: 62 G 62 G Sbjct: 119 G 119 >gi|257792649|ref|YP_003183255.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488937|ref|ZP_07947467.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831018|ref|ZP_08164342.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] gi|257476546|gb|ACV56866.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912011|gb|EFV33590.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486939|gb|EGC89385.1| Tat pathway signal sequence domain protein [Eggerthella sp. HGA1] Length = 253 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 E+C C C+ CPV Y E + +CI CG+C CP + + D+E G Sbjct: 150 EHCKQCADPACMNYCPVHAIYADEESGARTVDTKKCIGCGMCSQACPWNMPRVDSETG 207 Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V T+ CI C C + CP + +CI CG C +CP AIK Sbjct: 180 VDTKKCIGCG--MCSQACPWNMPRVDSETGV--STKCISCGRCAEQCPNGAIKF 229 >gi|213647942|ref|ZP_03377995.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 100 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + P CI C C CP A Sbjct: 1 CHQCEDAPCANVCPVQAIRRDRGHIFVTPSRCIGCKSCMLACPFGA 46 >gi|170727211|ref|YP_001761237.1| NADH-quinone oxidoreductase subunit I [Shewanella woodyi ATCC 51908] gi|226737416|sp|B1KJV5|NUOI_SHEWM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|169812558|gb|ACA87142.1| NADH-quinone oxidoreductase, chain I [Shewanella woodyi ATCC 51908] Length = 171 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 12/88 (13%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E E+ I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CSVACPVDCISVVKTEKEDGRWEAESFTINFSRCIMCGFCEEACPTHAIQ 106 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKK 84 + + + + N + + I+ Sbjct: 107 LTPDVEMAEYDRQNLVFEKEHLLISGPG 134 >gi|154249015|ref|YP_001409840.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154152951|gb|ABS60183.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Fervidobacterium nodosum Rt17-B1] Length = 550 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 Y+++ CK+ C+ CPV + + DECI CG C CP +A Sbjct: 6 YIISNR-ANCKYCYKCLRNCPVKAISFQNDVSFVIEDECILCGTCVNVCPQNA 57 >gi|15802828|ref|NP_288855.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 EDL933] gi|15832419|ref|NP_311192.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. Sakai] gi|16130216|ref|NP_416784.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. MG1655] gi|24113653|ref|NP_708163.1| NADH dehydrogenase subunit I [Shigella flexneri 2a str. 301] gi|26248668|ref|NP_754708.1| NADH dehydrogenase subunit I [Escherichia coli CFT073] gi|30063707|ref|NP_837878.1| NADH dehydrogenase subunit I [Shigella flexneri 2a str. 2457T] gi|82544759|ref|YP_408706.1| NADH dehydrogenase subunit I [Shigella boydii Sb227] gi|89109099|ref|AP_002879.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. W3110] gi|91211573|ref|YP_541559.1| NADH dehydrogenase subunit I [Escherichia coli UTI89] gi|110642485|ref|YP_670215.1| NADH dehydrogenase subunit I [Escherichia coli 536] gi|110806244|ref|YP_689764.1| NADH dehydrogenase subunit I [Shigella flexneri 5 str. 8401] gi|117624470|ref|YP_853383.1| NADH dehydrogenase subunit I [Escherichia coli APEC O1] gi|157157555|ref|YP_001463624.1| NADH dehydrogenase subunit I [Escherichia coli E24377A] gi|157161769|ref|YP_001459087.1| NADH dehydrogenase subunit I [Escherichia coli HS] gi|168748130|ref|ZP_02773152.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4113] gi|168755033|ref|ZP_02780040.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4401] gi|168761280|ref|ZP_02786287.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4501] gi|168767907|ref|ZP_02792914.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4486] gi|168772993|ref|ZP_02798000.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4196] gi|168780136|ref|ZP_02805143.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4076] gi|168787188|ref|ZP_02812195.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC869] gi|168798451|ref|ZP_02823458.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC508] gi|170019410|ref|YP_001724364.1| NADH dehydrogenase subunit I [Escherichia coli ATCC 8739] gi|170081898|ref|YP_001731218.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. DH10B] gi|170681076|ref|YP_001744479.1| NADH dehydrogenase subunit I [Escherichia coli SMS-3-5] gi|170767587|ref|ZP_02902040.1| NADH-quinone oxidoreductase, I subunit [Escherichia albertii TW07627] gi|187731669|ref|YP_001881102.1| NADH dehydrogenase subunit I [Shigella boydii CDC 3083-94] gi|188493684|ref|ZP_03000954.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 53638] gi|191166474|ref|ZP_03028304.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B7A] gi|191170159|ref|ZP_03031713.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli F11] gi|193062235|ref|ZP_03043330.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E22] gi|193068159|ref|ZP_03049123.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E110019] gi|194427176|ref|ZP_03059727.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B171] gi|194433333|ref|ZP_03065613.1| NADH-quinone oxidoreductase, I subunit [Shigella dysenteriae 1012] gi|194436354|ref|ZP_03068456.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 101-1] gi|195935658|ref|ZP_03081040.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. EC4024] gi|208805658|ref|ZP_03247995.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4206] gi|208814081|ref|ZP_03255410.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4045] gi|208818598|ref|ZP_03258918.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4042] gi|209399174|ref|YP_002271690.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4115] gi|209919729|ref|YP_002293813.1| NADH dehydrogenase subunit I [Escherichia coli SE11] gi|215487494|ref|YP_002329925.1| NADH dehydrogenase subunit I [Escherichia coli O127:H6 str. E2348/69] gi|217326746|ref|ZP_03442829.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. TW14588] gi|218548270|ref|YP_002382061.1| NADH dehydrogenase subunit I [Escherichia fergusonii ATCC 35469] gi|218554837|ref|YP_002387750.1| NADH dehydrogenase subunit I [Escherichia coli IAI1] gi|218559194|ref|YP_002392107.1| NADH dehydrogenase subunit I [Escherichia coli S88] gi|218690441|ref|YP_002398653.1| NADH dehydrogenase subunit I [Escherichia coli ED1a] gi|218695880|ref|YP_002403547.1| NADH dehydrogenase subunit I [Escherichia coli 55989] gi|218700755|ref|YP_002408384.1| NADH dehydrogenase subunit I [Escherichia coli IAI39] gi|218705811|ref|YP_002413330.1| NADH dehydrogenase subunit I [Escherichia coli UMN026] gi|227887337|ref|ZP_04005142.1| NADH dehydrogenase subunit I [Escherichia coli 83972] gi|237704755|ref|ZP_04535236.1| NADH:ubiquinone oxidoreductase [Escherichia sp. 3_2_53FAA] gi|238901456|ref|YP_002927252.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli BW2952] gi|253772797|ref|YP_003035628.1| NADH dehydrogenase subunit I [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162290|ref|YP_003045398.1| NADH dehydrogenase subunit I [Escherichia coli B str. REL606] gi|254794173|ref|YP_003079010.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. TW14359] gi|256017563|ref|ZP_05431428.1| NADH dehydrogenase subunit I [Shigella sp. D9] gi|256022035|ref|ZP_05435900.1| NADH dehydrogenase subunit I [Escherichia sp. 4_1_40B] gi|260844868|ref|YP_003222646.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O103:H2 str. 12009] gi|260856325|ref|YP_003230216.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O26:H11 str. 11368] gi|260869004|ref|YP_003235406.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O111:H- str. 11128] gi|261223265|ref|ZP_05937546.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. FRIK2000] gi|261259185|ref|ZP_05951718.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. FRIK966] gi|291283522|ref|YP_003500340.1| NADH-quinone oxidoreductase subunit I [Escherichia coli O55:H7 str. CB9615] gi|293405747|ref|ZP_06649739.1| NADH-quinone oxidoreductase [Escherichia coli FVEC1412] gi|293410641|ref|ZP_06654217.1| conserved hypothetical protein [Escherichia coli B354] gi|293415574|ref|ZP_06658217.1| NADH dehydrogenase I subunit I [Escherichia coli B185] gi|293446618|ref|ZP_06663040.1| NADH dehydrogenase I subunit I [Escherichia coli B088] gi|297518346|ref|ZP_06936732.1| NADH dehydrogenase subunit I [Escherichia coli OP50] gi|298381430|ref|ZP_06991029.1| NADH-quinone oxidoreductase subunit I [Escherichia coli FVEC1302] gi|300818119|ref|ZP_07098331.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 107-1] gi|300822152|ref|ZP_07102294.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 119-7] gi|300896955|ref|ZP_07115436.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 198-1] gi|300903666|ref|ZP_07121582.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 84-1] gi|300918554|ref|ZP_07135144.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 115-1] gi|300924540|ref|ZP_07140504.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 182-1] gi|300931366|ref|ZP_07146697.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 187-1] gi|300936845|ref|ZP_07151734.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 21-1] gi|300948575|ref|ZP_07162668.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 116-1] gi|300956459|ref|ZP_07168748.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 175-1] gi|300981077|ref|ZP_07175349.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 200-1] gi|300983376|ref|ZP_07176560.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 45-1] gi|301024079|ref|ZP_07187793.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 69-1] gi|301026951|ref|ZP_07190344.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 196-1] gi|301049034|ref|ZP_07196019.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 185-1] gi|301303260|ref|ZP_07209385.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 124-1] gi|301328773|ref|ZP_07221821.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 78-1] gi|301647622|ref|ZP_07247418.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 146-1] gi|306814608|ref|ZP_07448770.1| NADH dehydrogenase subunit I [Escherichia coli NC101] gi|307138945|ref|ZP_07498301.1| NADH dehydrogenase subunit I [Escherichia coli H736] gi|307311159|ref|ZP_07590803.1| NADH-quinone oxidoreductase, chain I [Escherichia coli W] gi|309793160|ref|ZP_07687588.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 145-7] gi|312973460|ref|ZP_07787632.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1827-70] gi|331642919|ref|ZP_08344054.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H736] gi|331647936|ref|ZP_08349028.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M605] gi|331653723|ref|ZP_08354724.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M718] gi|331663795|ref|ZP_08364705.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA143] gi|331668979|ref|ZP_08369827.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA271] gi|331673786|ref|ZP_08374549.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA280] gi|331678227|ref|ZP_08378902.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H591] gi|331683953|ref|ZP_08384549.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H299] gi|332278573|ref|ZP_08390986.1| NADH-quinone oxidoreductase subunit I [Shigella sp. D9] gi|84028753|sp|P0AFD8|NUOI_ECO57 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028754|sp|P0AFD7|NUOI_ECOL6 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028755|sp|P0AFD6|NUOI_ECOLI RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|84028756|sp|P0AFD9|NUOI_SHIFL RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I; AltName: Full=NUO9 gi|110287772|sp|Q31YI0|NUOI_SHIBS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|115502527|sp|Q1R9D6|NUOI_ECOUT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123147879|sp|Q0TFG5|NUOI_ECOL5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|123342668|sp|Q0T2K6|NUOI_SHIF8 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633517|sp|A1ADC9|NUOI_ECOK1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|12516631|gb|AAG57410.1|AE005460_4 NADH dehydrogenase I chain I [Escherichia coli O157:H7 str. EDL933] gi|26109073|gb|AAN81276.1|AE016763_235 NADH dehydrogenase I chain I [Escherichia coli CFT073] gi|1788617|gb|AAC75341.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. MG1655] gi|13362635|dbj|BAB36588.1| NADH dehydrogenase I chain I [Escherichia coli O157:H7 str. Sakai] gi|24052717|gb|AAN43870.1| NADH dehydrogenase I chain I [Shigella flexneri 2a str. 301] gi|30041962|gb|AAP17688.1| NADH dehydrogenase I chain I [Shigella flexneri 2a str. 2457T] gi|81246170|gb|ABB66878.1| NADH dehydrogenase I chain I [Shigella boydii Sb227] gi|85675342|dbj|BAA16109.2| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K12 substr. W3110] gi|91073147|gb|ABE08028.1| NADH dehydrogenase I chain I [Escherichia coli UTI89] gi|110344077|gb|ABG70314.1| NADH dehydrogenase I chain I [Escherichia coli 536] gi|110615792|gb|ABF04459.1| NADH dehydrogenase I chain I [Shigella flexneri 5 str. 8401] gi|115513594|gb|ABJ01669.1| NADH dehydrogenase I chain I [Escherichia coli APEC O1] gi|157067449|gb|ABV06704.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli HS] gi|157079585|gb|ABV19293.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E24377A] gi|169754338|gb|ACA77037.1| NADH-quinone oxidoreductase, chain I [Escherichia coli ATCC 8739] gi|169889733|gb|ACB03440.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli str. K-12 substr. DH10B] gi|170123921|gb|EDS92852.1| NADH-quinone oxidoreductase, I subunit [Escherichia albertii TW07627] gi|170518794|gb|ACB16972.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli SMS-3-5] gi|187428661|gb|ACD07935.1| NADH-quinone oxidoreductase, I subunit [Shigella boydii CDC 3083-94] gi|187771242|gb|EDU35086.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4196] gi|188017199|gb|EDU55321.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4113] gi|188488883|gb|EDU63986.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 53638] gi|189002016|gb|EDU71002.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4076] gi|189357566|gb|EDU75985.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4401] gi|189362978|gb|EDU81397.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4486] gi|189368249|gb|EDU86665.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4501] gi|189372827|gb|EDU91243.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC869] gi|189379037|gb|EDU97453.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC508] gi|190903434|gb|EDV63153.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B7A] gi|190909675|gb|EDV69260.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli F11] gi|192931901|gb|EDV84500.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E22] gi|192958438|gb|EDV88877.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli E110019] gi|194414797|gb|EDX31068.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli B171] gi|194418427|gb|EDX34516.1| NADH-quinone oxidoreductase, I subunit [Shigella dysenteriae 1012] gi|194425082|gb|EDX41067.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli 101-1] gi|208725459|gb|EDZ75060.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4206] gi|208735358|gb|EDZ84045.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4045] gi|208738721|gb|EDZ86403.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4042] gi|209160574|gb|ACI38007.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. EC4115] gi|209765138|gb|ACI80881.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765140|gb|ACI80882.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765142|gb|ACI80883.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765144|gb|ACI80884.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209765146|gb|ACI80885.1| NADH dehydrogenase I chain I [Escherichia coli] gi|209912988|dbj|BAG78062.1| NADH dehydrogenase I chain I [Escherichia coli SE11] gi|215265566|emb|CAS09969.1| NADH: ubiquinone oxidoreductase, chain I [Escherichia coli O127:H6 str. E2348/69] gi|217319113|gb|EEC27538.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli O157:H7 str. TW14588] gi|218352612|emb|CAU98393.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli 55989] gi|218355811|emb|CAQ88424.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia fergusonii ATCC 35469] gi|218361605|emb|CAQ99197.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli IAI1] gi|218365963|emb|CAR03707.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli S88] gi|218370741|emb|CAR18554.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli IAI39] gi|218428005|emb|CAR08776.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli ED1a] gi|218432908|emb|CAR13802.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli UMN026] gi|222034037|emb|CAP76778.1| NadH-quinone oxidoreductase subunit I [Escherichia coli LF82] gi|226901121|gb|EEH87380.1| NADH:ubiquinone oxidoreductase [Escherichia sp. 3_2_53FAA] gi|227835687|gb|EEJ46153.1| NADH dehydrogenase subunit I [Escherichia coli 83972] gi|238861872|gb|ACR63870.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli BW2952] gi|242377914|emb|CAQ32683.1| NADH:ubiquinone oxidoreductase, chain I, subunit of connecting fragment of NADH dehydrogenase I and NADH:ubiquinone oxidoreductase I [Escherichia coli BL21(DE3)] gi|253323841|gb|ACT28443.1| NADH-quinone oxidoreductase, chain I [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974191|gb|ACT39862.1| NADH dehydrogenase subunit I [Escherichia coli B str. REL606] gi|253978358|gb|ACT44028.1| NADH dehydrogenase subunit I [Escherichia coli BL21(DE3)] gi|254593573|gb|ACT72934.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O157:H7 str. TW14359] gi|257754974|dbj|BAI26476.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O26:H11 str. 11368] gi|257760015|dbj|BAI31512.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O103:H2 str. 12009] gi|257765360|dbj|BAI36855.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli O111:H- str. 11128] gi|260448626|gb|ACX39048.1| NADH-quinone oxidoreductase, chain I [Escherichia coli DH1] gi|281179368|dbj|BAI55698.1| NADH dehydrogenase I chain I [Escherichia coli SE15] gi|281601722|gb|ADA74706.1| NADH-quinone oxidoreductase subunit I [Shigella flexneri 2002017] gi|284922269|emb|CBG35354.1| NADH-quinone oxidoreductase subunit I [Escherichia coli 042] gi|290763395|gb|ADD57356.1| NADH-quinone oxidoreductase subunit I [Escherichia coli O55:H7 str. CB9615] gi|291323448|gb|EFE62876.1| NADH dehydrogenase I subunit I [Escherichia coli B088] gi|291427955|gb|EFF00982.1| NADH-quinone oxidoreductase [Escherichia coli FVEC1412] gi|291433222|gb|EFF06201.1| NADH dehydrogenase I subunit I [Escherichia coli B185] gi|291471109|gb|EFF13593.1| conserved hypothetical protein [Escherichia coli B354] gi|294489898|gb|ADE88654.1| NADH-quinone oxidoreductase, I subunit [Escherichia coli IHE3034] gi|298278872|gb|EFI20386.1| NADH-quinone oxidoreductase subunit I [Escherichia coli FVEC1302] gi|299879498|gb|EFI87709.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 196-1] gi|300299143|gb|EFJ55528.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 185-1] gi|300307690|gb|EFJ62210.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 200-1] gi|300316729|gb|EFJ66513.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 175-1] gi|300359223|gb|EFJ75093.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 198-1] gi|300396735|gb|EFJ80273.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 69-1] gi|300404322|gb|EFJ87860.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 84-1] gi|300408542|gb|EFJ92080.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 45-1] gi|300414289|gb|EFJ97599.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 115-1] gi|300419258|gb|EFK02569.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 182-1] gi|300451923|gb|EFK15543.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 116-1] gi|300458032|gb|EFK21525.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 21-1] gi|300460828|gb|EFK24321.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 187-1] gi|300525282|gb|EFK46351.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 119-7] gi|300529263|gb|EFK50325.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 107-1] gi|300841434|gb|EFK69194.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 124-1] gi|300844835|gb|EFK72595.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 78-1] gi|301074249|gb|EFK89055.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 146-1] gi|305852002|gb|EFM52454.1| NADH dehydrogenase subunit I [Escherichia coli NC101] gi|306908665|gb|EFN39162.1| NADH-quinone oxidoreductase, chain I [Escherichia coli W] gi|307554343|gb|ADN47118.1| NADH dehydrogenase I chain I [Escherichia coli ABU 83972] gi|307626183|gb|ADN70487.1| NADH dehydrogenase subunit I [Escherichia coli UM146] gi|308123446|gb|EFO60708.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 145-7] gi|309702593|emb|CBJ01921.1| NADH-quinone oxidoreductase subunit I [Escherichia coli ETEC H10407] gi|310332055|gb|EFP99290.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1827-70] gi|312946899|gb|ADR27726.1| NADH dehydrogenase subunit I [Escherichia coli O83:H1 str. NRG 857C] gi|313651104|gb|EFS15503.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri 2a str. 2457T] gi|315061573|gb|ADT75900.1| NADH:ubiquinone oxidoreductase, chain I [Escherichia coli W] gi|315136915|dbj|BAJ44074.1| NADH-quinone oxidoreductase subunit I [Escherichia coli DH1] gi|315255215|gb|EFU35183.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 85-1] gi|315285919|gb|EFU45357.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 110-3] gi|315292246|gb|EFU51598.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 153-1] gi|315298120|gb|EFU57389.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 16-3] gi|320177163|gb|EFW52175.1| NADH-ubiquinone oxidoreductase chain I [Shigella dysenteriae CDC 74-1112] gi|320178746|gb|EFW53709.1| NADH-ubiquinone oxidoreductase chain I [Shigella boydii ATCC 9905] gi|320183376|gb|EFW58228.1| NADH-ubiquinone oxidoreductase chain I [Shigella flexneri CDC 796-83] gi|320192098|gb|EFW66743.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. EC1212] gi|320196148|gb|EFW70772.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli WV_060327] gi|320199869|gb|EFW74458.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli EC4100B] gi|320641108|gb|EFX10587.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. G5101] gi|320646496|gb|EFX15415.1| NADH dehydrogenase subunit I [Escherichia coli O157:H- str. 493-89] gi|320651593|gb|EFX19973.1| NADH dehydrogenase subunit I [Escherichia coli O157:H- str. H 2687] gi|320657345|gb|EFX25147.1| NADH dehydrogenase subunit I [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663047|gb|EFX30364.1| NADH dehydrogenase subunit I [Escherichia coli O55:H7 str. USDA 5905] gi|320667865|gb|EFX34773.1| NADH dehydrogenase subunit I [Escherichia coli O157:H7 str. LSU-61] gi|323156431|gb|EFZ42586.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli EPECa14] gi|323161615|gb|EFZ47500.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli E128010] gi|323171962|gb|EFZ57606.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli LT-68] gi|323176794|gb|EFZ62384.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1180] gi|323184400|gb|EFZ69776.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 1357] gi|323187994|gb|EFZ73289.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli RN587/1] gi|323377847|gb|ADX50115.1| NADH-quinone oxidoreductase, chain I [Escherichia coli KO11] gi|323936571|gb|EGB32858.1| NADH-quinone oxidoreductase [Escherichia coli E1520] gi|323941022|gb|EGB37209.1| NADH-quinone oxidoreductase [Escherichia coli E482] gi|323944794|gb|EGB40860.1| NADH-quinone oxidoreductase [Escherichia coli H120] gi|323952074|gb|EGB47948.1| NADH-quinone oxidoreductase [Escherichia coli H252] gi|323956047|gb|EGB51800.1| NADH-quinone oxidoreductase [Escherichia coli H263] gi|323961464|gb|EGB57074.1| NADH-quinone oxidoreductase [Escherichia coli H489] gi|323967722|gb|EGB63134.1| NADH-quinone oxidoreductase [Escherichia coli M863] gi|323973014|gb|EGB68208.1| NADH-quinone oxidoreductase [Escherichia coli TA007] gi|323977518|gb|EGB72604.1| NADH-quinone oxidoreductase [Escherichia coli TW10509] gi|324006669|gb|EGB75888.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 57-2] gi|324013179|gb|EGB82398.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 60-1] gi|324020877|gb|EGB90096.1| NADH-quinone oxidoreductase, chain I [Escherichia coli MS 117-3] gi|324112813|gb|EGC06789.1| NADH-quinone oxidoreductase [Escherichia fergusonii B253] gi|324117841|gb|EGC11740.1| NADH-quinone oxidoreductase [Escherichia coli E1167] gi|325496684|gb|EGC94543.1| NADH dehydrogenase subunit I [Escherichia fergusonii ECD227] gi|326339632|gb|EGD63443.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. 1125] gi|326344094|gb|EGD67855.1| NADH-ubiquinone oxidoreductase chain I [Escherichia coli O157:H7 str. 1044] gi|327252551|gb|EGE64210.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli STEC_7v] gi|330912106|gb|EGH40616.1| NADH-ubiquinone oxidoreductase chain 1 [Escherichia coli AA86] gi|331039717|gb|EGI11937.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H736] gi|331043660|gb|EGI15798.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M605] gi|331048572|gb|EGI20648.1| NADH-quinone oxidoreductase subunit I [Escherichia coli M718] gi|331059594|gb|EGI31571.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA143] gi|331064173|gb|EGI36084.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA271] gi|331069059|gb|EGI40451.1| NADH-quinone oxidoreductase subunit I [Escherichia coli TA280] gi|331074687|gb|EGI46007.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H591] gi|331078905|gb|EGI50107.1| NADH-quinone oxidoreductase subunit I [Escherichia coli H299] gi|332088411|gb|EGI93529.1| NADH-quinone oxidoreductase, chain I family protein [Shigella boydii 5216-82] gi|332090608|gb|EGI95704.1| NADH-quinone oxidoreductase, chain I family protein [Shigella dysenteriae 155-74] gi|332093681|gb|EGI98739.1| NADH-quinone oxidoreductase, chain I family protein [Shigella boydii 3594-74] gi|332100925|gb|EGJ04271.1| NADH-quinone oxidoreductase subunit I [Shigella sp. D9] gi|332344062|gb|AEE57396.1| NADH-quinone oxidoreductase, chain I [Escherichia coli UMNK88] gi|332755330|gb|EGJ85694.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-671] gi|332756322|gb|EGJ86673.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri 2747-71] gi|332766100|gb|EGJ96310.1| nuoI [Shigella flexneri 2930-71] gi|333001425|gb|EGK20993.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri VA-6] gi|333001967|gb|EGK21533.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-218] gi|333002648|gb|EGK22208.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-272] gi|333016230|gb|EGK35561.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-304] gi|333016532|gb|EGK35862.1| NADH-quinone oxidoreductase, chain I family protein [Shigella flexneri K-227] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|332830196|gb|EGK02824.1| NADH-quinone oxidoreductase subunit I [Dysgonomonas gadei ATCC BAA-286] Length = 178 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 19/67 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 77 ERCTACGL--CALACPAEAITMVAAERKKGEEHLYREEKYAATYEINMLRCIFCGLCEDA 134 Query: 50 CPVDAIK 56 CP +AI Sbjct: 135 CPKEAIF 141 >gi|303228707|ref|ZP_07315531.1| 4Fe-4S binding domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302516618|gb|EFL58536.1| 4Fe-4S binding domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 271 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 3/66 (4%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M + V TE C C CV CP EN CI CG C CP A+ D Sbjct: 1 MLFTVNTEVCTRCGL--CVADCPTGLLVMSENGPVTGKGGCISCGHCISVCPTLALDSDM 58 Query: 60 EPGLEL 65 P E Sbjct: 59 TPRKEQ 64 >gi|302342004|ref|YP_003806533.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301638617|gb|ADK83939.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 279 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C++ CV VCP ++ E+ + + CI C C CP Sbjct: 129 CNHCQNPPCVRVCPTQATFKREDGIVMMDMHRCIGCRFCMAACPYG 174 >gi|294638102|ref|ZP_06716360.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] gi|291088757|gb|EFE21318.1| thiosulfate reductase electron transport protein phsb [Edwardsiella tarda ATCC 23685] Length = 212 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C C C++VCP Y ++ L I C+ CG C CP A Sbjct: 88 SCQHCDPAPCLDVCPSGATYRDQHGLIQIDAQRCLGCGYCISACPYQA 135 >gi|260887533|ref|ZP_05898796.1| dehydrogenase, beta subunit [Selenomonas sputigena ATCC 35185] gi|330837912|ref|YP_004412492.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Selenomonas sputigena ATCC 35185] gi|260862708|gb|EEX77208.1| dehydrogenase, beta subunit [Selenomonas sputigena ATCC 35185] gi|329745676|gb|AEB99032.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein [Selenomonas sputigena ATCC 35185] Length = 380 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECP 51 E+C C T C +CPV EN FL ++ C+ CG C CP Sbjct: 8 ESCTGC--TACRHICPVSAITMRENSEGFLYPKVNESLCVHCGRCVQVCP 55 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 14/36 (38%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 + C C C CPV AI L+ K+N Sbjct: 8 ESCTGCTACRHICPVSAITMRENSEGFLYPKVNESL 43 >gi|291613271|ref|YP_003523428.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291583383|gb|ADE11041.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 84 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++TE CI C C CP +GE+ + P +C +C C CPVD Sbjct: 1 MALMITEECINCDV--CEPECPNGALSQGEDRYIVDPGKCTECVGHFDTPQCIEVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IVQD 62 >gi|238923284|ref|YP_002936799.1| sulfite reductase, beta subunit [Eubacterium rectale ATCC 33656] gi|238874958|gb|ACR74665.1| sulfite reductase, beta subunit [Eubacterium rectale ATCC 33656] Length = 289 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C CV+ C + + I D+C +C C CP DA Sbjct: 165 DDCIQCGV--CVKACREGALSMEDGRIVIDRDKCNNCARCVKSCPTDA 210 Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C++ D +G + D+CI CGVC C A+ + Sbjct: 143 NCLKAEENDVGIKGGMTVECSHDDCIQCGVCVKACREGALSMED 186 >gi|258576549|ref|XP_002542456.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Uncinocarpus reesii 1704] gi|237902722|gb|EEP77123.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Uncinocarpus reesii 1704] Length = 232 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 131 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 188 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 189 ESP----------NAEYATETREELLYNKEKLLANGDKWE 218 >gi|237732312|ref|ZP_04562793.1| NADH dehydrogenase subunit I [Citrobacter sp. 30_2] gi|283832289|ref|ZP_06352030.1| NADH-quinone oxidoreductase subunit I [Citrobacter youngae ATCC 29220] gi|226907851|gb|EEH93769.1| NADH dehydrogenase subunit I [Citrobacter sp. 30_2] gi|291071934|gb|EFE10043.1| NADH-quinone oxidoreductase subunit I [Citrobacter youngae ATCC 29220] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEY 125 >gi|209695456|ref|YP_002263385.1| cytochrome c-type biogenesis protein NrfC [Aliivibrio salmonicida LFI1238] gi|208009408|emb|CAQ79684.1| cytochrome c-type biogenesis protein NrfC [Aliivibrio salmonicida LFI1238] Length = 228 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENAPCVMVCPTGAAYKDEATGIVDVHNEKCVGCGYCLAACPYQ 145 >gi|158523129|ref|YP_001530999.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511955|gb|ABW68922.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 392 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C CV C ++ F + ++ D+CI CG+C C A+K Sbjct: 303 CNGCG--KCVRRCQMNAFVVKDKMAVLNIDKCIGCGLCVTTCKTGALK 348 >gi|222054450|ref|YP_002536812.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221563739|gb|ACM19711.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 251 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 17/88 (19%) Query: 8 NCILCKHTDCVEVCPVDCFYE---------GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C CV CPV G + ++ +CI CG C P CP A D Sbjct: 79 PCMQCDKPPCVAACPVKGPDGATWKETKGIGNGIVPVNYAKCIGCGNCVPACPYQARTMD 138 Query: 59 T-------EPGLELWLKINS-EYATQWP 78 P L+++ + + EY +WP Sbjct: 139 DGSFHTAGTPQLQVYETLPAFEYGKKWP 166 >gi|325578318|ref|ZP_08148453.1| electron transport complex protein RnfB [Haemophilus parainfluenzae ATCC 33392] gi|325160054|gb|EGC72183.1| electron transport complex protein RnfB [Haemophilus parainfluenzae ATCC 33392] Length = 194 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I D C C +C CP D I Sbjct: 102 AFIDENMCIGC--TKCIQACPVDAIIGTNKAMHTIIADLCTGCELCVAPCPTDCI 154 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 18 VEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 V+V +D E E + I + CI C C CPVDAI Sbjct: 86 VDVPAMDDVAEPEEMVAFIDENMCIGCTKCIQACPVDAI 124 >gi|317488732|ref|ZP_07947268.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316912163|gb|EFV33736.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 207 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 M Y +T C C++ C +VCPV Y+ + D+CI C +C CP Sbjct: 58 MRY-ITVGCQHCENPACTKVCPVGATYKDPETGVVRQDYDKCIGCRMCMAACPYT 111 >gi|317489727|ref|ZP_07948230.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325830405|ref|ZP_08163862.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|316911193|gb|EFV32799.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325487872|gb|EGC90310.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 209 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + C C +CV+VCP ++ E+ + +CI C C CP + Sbjct: 58 YFLPVQCQHCADPECVKVCPTGASHKLEDGTVQVDKSKCIGCQFCAMACPYN 109 >gi|302381047|ref|ZP_07269507.1| putative electron transport complex protein RnfC [Finegoldia magna ACS-171-V-Col3] gi|302311094|gb|EFK93115.1| putative electron transport complex protein RnfC [Finegoldia magna ACS-171-V-Col3] Length = 442 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 21/66 (31%) Query: 7 ENCILCKHTDCVEVCPV------------DCFYEGENFLAIHPDECIDCGVCEPECP--- 51 E CI C CV+VCP+ + +EG + ++ +CI+CG C CP Sbjct: 366 EPCIKC--AKCVDVCPIGLLPLFLQLKSLNGDFEGAEKMHLN--DCIECGTCSYICPSNR 421 Query: 52 --VDAI 55 V+AI Sbjct: 422 PLVEAI 427 >gi|302391035|ref|YP_003826855.1| hypothetical protein Acear_0240 [Acetohalobium arabaticum DSM 5501] gi|302203112|gb|ADL11790.1| protein of unknown function DUF362 [Acetohalobium arabaticum DSM 5501] Length = 385 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAIK 56 ++C C C++ CP E ++ +L I EC C C+ CP DAI+ Sbjct: 320 QSCTQC--RTCLDSCPQQVIIEQQDGNNTYLEIDESECSKCLCCQEVCPFDAIE 371 >gi|262171714|ref|ZP_06039392.1| NrfC protein [Vibrio mimicus MB-451] gi|261892790|gb|EEY38776.1| NrfC protein [Vibrio mimicus MB-451] Length = 212 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 82 SCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCIAACPYQ 129 >gi|237752820|ref|ZP_04583300.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Helicobacter winghamensis ATCC BAA-430] gi|229376309|gb|EEO26400.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Helicobacter winghamensis ATCC BAA-430] Length = 189 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C +C+HT CV VCP + EN + I +C+ C C CP +A Sbjct: 58 SCEMCEHTPCVTVCPTHASFMDENGIVDIDASQCVGCLYCVVACPYNA 105 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 14/64 (21%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG----------VCEPECPVDAIKPD 58 C+ C + CV CP + Y PD+C C C CP DA+ Sbjct: 91 CVGCLY--CVVACPYNARYVNPETKV--PDKCNFCKHTHLKQYGEPACVAVCPTDALVFG 146 Query: 59 TEPG 62 Sbjct: 147 DLDD 150 >gi|150375766|ref|YP_001312362.1| NADH-quinone oxidoreductase subunit I [Sinorhizobium medicae WSM419] gi|150030313|gb|ABR62429.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium medicae WSM419] Length = 211 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C ++CP DC I C+ CG+CE CP DAI Sbjct: 91 CVACEL--CAQICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 145 >gi|150008480|ref|YP_001303223.1| putative pyruvate formate-lyase 3 activating enzyme [Parabacteroides distasonis ATCC 8503] gi|149936904|gb|ABR43601.1| putative pyruvate formate-lyase 3 activating enzyme [Parabacteroides distasonis ATCC 8503] Length = 309 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + CI C C +CP ++F + C+ C CE CP +AIK Sbjct: 59 IKNKCIGCG--RCEAICPRGNISIQDHFPVFNRQACVACKACERICPQNAIKF 109 >gi|118594444|ref|ZP_01551791.1| electron transport complex protein RnfB [Methylophilales bacterium HTCC2181] gi|118440222|gb|EAV46849.1| electron transport complex protein RnfB [Methylophilales bacterium HTCC2181] Length = 188 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + I EC C +C P CPVD I Sbjct: 111 DTCIGC--TLCIQACPVDAILGSAKHMHTIIEKECTGCELCLPPCPVDCI 158 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I D CI C +C CPVDAI Sbjct: 108 IDEDTCIGCTLCIQACPVDAI 128 >gi|57233532|ref|YP_180854.1| molybdopterin oxidoreductase, iron-sulfur binding subunit, putative [Dehalococcoides ethenogenes 195] gi|57223980|gb|AAW39037.1| molybdopterin oxidoreductase, iron-sulfur binding subunit, putative [Dehalococcoides ethenogenes 195] Length = 312 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C + C +VCPV F + + + I CI C C CP A Sbjct: 146 PCMHCDNPPCTKVCPVGATFKQPDGIVVIDYHRCIGCRFCIVACPYVA 193 >gi|88797606|ref|ZP_01113195.1| ferredoxin, 4Fe-4S [Reinekea sp. MED297] gi|88779778|gb|EAR10964.1| ferredoxin, 4Fe-4S [Reinekea sp. MED297] Length = 84 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C C CP + YEG+ I P C +C C+ CPVD Sbjct: 1 MALFITDECINCDV--CEPECPNNAIYEGDEIYEIDPTLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPND 62 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP +AI E Sbjct: 7 DECINCDVCEPECPNNAIYEGDE 29 >gi|332798931|ref|YP_004460430.1| putative PAS/PAC sensor protein [Tepidanaerobacter sp. Re1] gi|332696666|gb|AEE91123.1| putative PAS/PAC sensor protein [Tepidanaerobacter sp. Re1] Length = 573 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV ++ I + CI CG C CP +A Sbjct: 10 NCKNC--YKCIRACPVKAIRMKDDQAEIVDERCITCGTCLTICPQNA 54 >gi|312136412|ref|YP_004003749.1| cob--com heterodisulfide reductase subunit a [Methanothermus fervidus DSM 2088] gi|311224131|gb|ADP76987.1| CoB--CoM heterodisulfide reductase subunit A [Methanothermus fervidus DSM 2088] Length = 681 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDC---FYEGENF---------------LAIHPDECIDCG 44 YV + C C C+EVCP++ F EG I+ D CI+C Sbjct: 267 YVDEDLCTGCG--SCIEVCPIEVPNYFDEGMGMSKAIYIPFPQAVPLCATINKDYCIECN 324 Query: 45 VCEPECPVDAIKPDTEPGL 63 +C+ C AIK D +P Sbjct: 325 LCDQVCERGAIKHDQKPEE 343 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 2/72 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + C C CVE+CP E + C CG C CP A+ Sbjct: 603 ATVNEDICGGCGV--CVELCPFGAIELKEGKAHVTVALCKGCGTCAAACPSGAMDQKHFR 660 Query: 62 GLELWLKINSEY 73 ++ +I + Sbjct: 661 TQQIMAQIEAAL 672 >gi|308186747|ref|YP_003930878.1| Electron transport complex protein rnfB [Pantoea vagans C9-1] gi|308057257|gb|ADO09429.1| Electron transport complex protein rnfB [Pantoea vagans C9-1] Length = 192 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 163 >gi|304397719|ref|ZP_07379596.1| electron transport complex, RnfABCDGE type, B subunit [Pantoea sp. aB] gi|304354891|gb|EFM19261.1| electron transport complex, RnfABCDGE type, B subunit [Pantoea sp. aB] Length = 192 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 110 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 163 >gi|302389267|ref|YP_003825088.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Thermosediminibacter oceani DSM 16646] gi|302199895|gb|ADL07465.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Thermosediminibacter oceani DSM 16646] Length = 597 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 TY +T + C C CV+VCP E + AI+ ++CI C C C AI+ Sbjct: 541 TYEITVDKCKGCGL--CVKVCPAGAITGERKQPHAINREKCIKCNSCFERCRFGAIE 595 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 5/52 (9%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 CP + I D+C CG+C CP AI + + IN E Sbjct: 531 CPAGA-CKALITYEITVDKCKGCGLCVKVCPAGAITGERKQPH----AINRE 577 >gi|293370175|ref|ZP_06616735.1| ferredoxin [Bacteroides ovatus SD CMC 3f] gi|292634672|gb|EFF53201.1| ferredoxin [Bacteroides ovatus SD CMC 3f] Length = 304 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T +CI C CV+ CP + N I P++C C C CP ++I Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPNKCKSCRKCVEVCPQNSI 265 Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|257065432|ref|YP_003145104.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256793085|gb|ACV23755.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 192 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIKP 57 C C + C VCP ++ + L +H D CI C C CP A + Sbjct: 58 CNHCDNPACTAVCPTGAMFKNDEGLVLHDDNVCIGCQSCVNACPYSAPQY 107 >gi|237809387|ref|YP_002893827.1| NADH dehydrogenase subunit I [Tolumonas auensis DSM 9187] gi|259514790|sp|C4LB38|NUOI_TOLAT RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|237501648|gb|ACQ94241.1| NADH-quinone oxidoreductase, chain I [Tolumonas auensis DSM 9187] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAERVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|221212642|ref|ZP_03585619.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD1] gi|221167741|gb|EEE00211.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD1] Length = 247 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|167901877|ref|ZP_02489082.1| ferredoxin [Burkholderia pseudomallei NCTC 13177] Length = 177 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|167623339|ref|YP_001673633.1| hydrogenase, Fe-only [Shewanella halifaxensis HAW-EB4] gi|167353361|gb|ABZ75974.1| hydrogenase, Fe-only [Shewanella halifaxensis HAW-EB4] Length = 410 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 C C C + CP + EG + I+ ++C+ CG C CP AI Sbjct: 22 CKGCD--ACQKFCPTNAI-EGASGAVHSINKEKCLSCGQCLINCPFGAI 67 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIK 56 E + + I +C C C+ CP +AI+ Sbjct: 10 EIQGLIEIQASKCKGCDACQKFCPTNAIE 38 >gi|149193850|ref|ZP_01870948.1| iron-sulfur cluster-binding protein CooF [Caminibacter mediatlanticus TB-2] gi|149135803|gb|EDM24281.1| iron-sulfur cluster-binding protein CooF [Caminibacter mediatlanticus TB-2] Length = 172 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C+ C++ CVE CP+D +++ I+ ++CI C C CP A+ P Sbjct: 63 CMQCENAPCVEACPIDIIKYEGDYVKIYEEDCIGCRSCAIVCPFGAVVMAESP 115 >gi|116251475|ref|YP_767313.1| NADH dehydrogenase subunit I [Rhizobium leguminosarum bv. viciae 3841] gi|241204096|ref|YP_002975192.1| NADH dehydrogenase subunit I [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115502540|sp|Q1MIK6|NUOI_RHIL3 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|115256123|emb|CAK07204.1| putative NADH-quinone oxidoreductase subunit I [Rhizobium leguminosarum bv. viciae 3841] gi|240857986|gb|ACS55653.1| NADH-quinone oxidoreductase, chain I [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|90418463|ref|ZP_01226375.1| putative 4Fe-4S ferredoxin [Aurantimonas manganoxydans SI85-9A1] gi|90338135|gb|EAS51786.1| putative 4Fe-4S ferredoxin [Aurantimonas manganoxydans SI85-9A1] Length = 680 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 T C++ CP + + I C CG C CP A+ D + Sbjct: 286 TKCIDNCPPSAISPDGDNILIDTAICGGCGNCAAHCPTGAVSYDYPARAQ 335 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPD 58 E C LC CV CP D + L C+ CG+C CP AI D Sbjct: 520 ERCTLC--MACVSACPADALRDTPGKPELRFVEAACVQCGICAATCPETAITLD 571 >gi|88602962|ref|YP_503140.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88188424|gb|ABD41421.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 113 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M + + CI C C + CP+D E + + D CI CGVC CP AI Sbjct: 20 MAQIDEDACIACG--ICRDERCPMDAIVEEDGEFQVLNDRCIGCGVCIITCPSKAITLIE 77 Query: 60 EPGLE 64 P E Sbjct: 78 RPVQE 82 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 25 CFYEGENFLAIHPDECIDCGVCEPE-CPVDAIKPDT 59 + I D CI CG+C E CP+DAI + Sbjct: 13 MIAKSNYMAQIDEDACIACGICRDERCPMDAIVEED 48 >gi|24374053|ref|NP_718096.1| electron transport complex protein RnfB [Shewanella oneidensis MR-1] gi|81744759|sp|Q8EE80|RNFB_SHEON RecName: Full=Electron transport complex protein rnfB gi|24348528|gb|AAN55540.1|AE015693_2 iron-sulfur cluster-binding protein [Shewanella oneidensis MR-1] Length = 193 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTAD-CTGCDLCVEPCPVDCI 159 >gi|325292642|ref|YP_004278506.1| NADH dehydrogenase I chain I [Agrobacterium sp. H13-3] gi|325060495|gb|ADY64186.1| NADH dehydrogenase I chain I [Agrobacterium sp. H13-3] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 37.1 bits (85), Expect = 0.94, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|323498655|ref|ZP_08103647.1| hypothetical protein VISI1226_02972 [Vibrio sinaloensis DSM 21326] gi|323316353|gb|EGA69372.1| hypothetical protein VISI1226_02972 [Vibrio sinaloensis DSM 21326] Length = 229 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQ 145 >gi|320538846|ref|ZP_08038522.1| putative iron-sulfur protein [Serratia symbiotica str. Tucson] gi|320031006|gb|EFW13009.1| putative iron-sulfur protein [Serratia symbiotica str. Tucson] Length = 190 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 108 AYIDEANCIGC--TKCIQACPVDAIVGATGAMHTVIADLCTGCDLCVAPCPTDCIE 161 >gi|331685236|ref|ZP_08385822.1| putative electron transport protein YsaA [Escherichia coli H299] gi|331077607|gb|EGI48819.1| putative electron transport protein YsaA [Escherichia coli H299] Length = 157 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T+ C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|296134475|ref|YP_003641722.1| sigma54 specific transcriptional regulator, Fis family [Thermincola sp. JR] gi|296033053|gb|ADG83821.1| sigma54 specific transcriptional regulator, Fis family [Thermincola potens JR] Length = 731 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 9/92 (9%) Query: 1 MTYV--VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 M+ V ++E C C CV CPV I + CI CG C C A K Sbjct: 1 MSVVTTISEKCQRC--YACVRNCPVKAIKVDRGQAKIIEERCIACGSCVRVCAQKAKKVA 58 Query: 59 TEPGLELWLKINSEYATQWPNITTKKESLPSA 90 ++ + A + I S P+A Sbjct: 59 SDISKAEY-----FLAVEKEVIAIVAPSFPAA 85 >gi|291618182|ref|YP_003520924.1| NuoI [Pantoea ananatis LMG 20103] gi|291153212|gb|ADD77796.1| NuoI [Pantoea ananatis LMG 20103] gi|327394575|dbj|BAK11997.1| NADH-quinone oxidoreductase chain I NuoI [Pantoea ananatis AJ13355] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Query: 6 TENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 KPDTEPGLELW 66 + + L + Sbjct: 115 QLTPDFELGEF 125 >gi|295675947|ref|YP_003604471.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. CCGE1002] gi|295435790|gb|ADG14960.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. CCGE1002] Length = 301 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + + C C +C P CPVD I Sbjct: 87 CIGC--TLCMQACPVDAIVGAPKQMHTVIAELCTGCDLCVPPCPVDCI 132 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 81 VIDEQVCIGCTLCMQACPVDAI 102 >gi|229529443|ref|ZP_04418833.1| iron-sulfur cluster-binding protein [Vibrio cholerae 12129(1)] gi|229333217|gb|EEN98703.1| iron-sulfur cluster-binding protein [Vibrio cholerae 12129(1)] Length = 553 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 T +C LC CV VCP + + L +C+ CG+C CP A Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQA 465 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLK 68 CV+ CP EG + + I+P C G C CP +AI + +++ Sbjct: 189 CVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIE 247 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + PD C C C CP A+ + ++IN Sbjct: 166 PKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|163868365|ref|YP_001609574.1| NADH dehydrogenase subunit I [Bartonella tribocorum CIP 105476] gi|240850591|ref|YP_002971991.1| NADH dehydrogenase I subunit I [Bartonella grahamii as4aup] gi|189030923|sp|A9IUN3|NUOI_BART1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|161018021|emb|CAK01579.1| NADH dehydrogenase I chain I [Bartonella tribocorum CIP 105476] gi|240267714|gb|ACS51302.1| NADH dehydrogenase I subunit I [Bartonella grahamii as4aup] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPV+AI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVEAI 118 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 61 ERCIACKLCEAICPAQAITIEAGP 84 Score = 34.7 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPV+ EG NF Sbjct: 103 CIYCGF--CQEACPVEAIVEGPNF 124 >gi|163794603|ref|ZP_02188574.1| DMSO reductase chain B [alpha proteobacterium BAL199] gi|159180327|gb|EDP64850.1| DMSO reductase chain B [alpha proteobacterium BAL199] Length = 271 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +C+ C+ CV VCP Y E + + ++ D CI C +C C A + D E G Sbjct: 90 SCLHCETPACVTVCPTGASYKREEDGIVLVNEDLCIGCKLCSWACAYGAREYDHEDG 146 >gi|114047406|ref|YP_737956.1| electron transport complex protein RnfB [Shewanella sp. MR-7] gi|123030634|sp|Q0HVF6|RNFB_SHESR RecName: Full=Electron transport complex protein rnfB gi|113888848|gb|ABI42899.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. MR-7] Length = 193 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTAD-CTGCDLCVEPCPVDCI 159 >gi|332249710|ref|XP_003274000.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [Nomascus leucogenys] Length = 217 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 116 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 172 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 116 ERCIACKLCEAICPAQAITIEAEPRAD 142 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 157 CIYCGF--CQEACPVDAIVEGPNF 178 >gi|324119155|gb|EGC13043.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] Length = 184 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 5/98 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 ++C C+ C++VCP + E + + +CI C C CP + P T+ Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVAD 111 Query: 64 ELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYE 101 + S A +P I + + P A + G + E Sbjct: 112 KCDFCAESRLAKGFPPICVR--ACPEHALIFGREDSPE 147 >gi|261206240|ref|XP_002627857.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Ajellomyces dermatitidis SLH14081] gi|239592916|gb|EEQ75497.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Ajellomyces dermatitidis SLH14081] gi|239610912|gb|EEQ87899.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Ajellomyces dermatitidis ER-3] gi|327357611|gb|EGE86468.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Ajellomyces dermatitidis ATCC 18188] Length = 235 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 134 ERCIACKL--CEAICPALAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 191 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 192 ESP----------NAEYATETREELLYNKEKLLANGDKWE 221 >gi|222148283|ref|YP_002549240.1| NADH dehydrogenase subunit I [Agrobacterium vitis S4] gi|254767831|sp|B9JVF4|NUOI_AGRVS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|221735271|gb|ACM36234.1| NADH ubiquinone oxidoreductase chain I [Agrobacterium vitis S4] Length = 163 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|218263700|ref|ZP_03477727.1| hypothetical protein PRABACTJOHN_03417 [Parabacteroides johnsonii DSM 18315] gi|218222557|gb|EEC95207.1| hypothetical protein PRABACTJOHN_03417 [Parabacteroides johnsonii DSM 18315] Length = 268 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++ T CI C C+++CP+ F + L CI C +C CP +I Sbjct: 185 FLNTSTCINCG--KCIKICPMHIFALKDTVLPTDEKNCIQCRLCADNCPTSSIY 236 >gi|170683893|ref|YP_001745861.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli SMS-3-5] gi|170521611|gb|ACB19789.1| 4Fe-4S binding domain protein [Escherichia coli SMS-3-5] Length = 157 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|147920950|ref|YP_685242.1| pyruvate:ferredoxin oxidoreductase, delta subunit [uncultured methanogenic archaeon RC-I] gi|110620638|emb|CAJ35916.1| pyruvate:ferredoxin oxidoreductase, delta subunit [uncultured methanogenic archaeon RC-I] Length = 95 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E CI CK C + CP +E + I+ D C CGVC ECPVDAI+ E Sbjct: 37 EKCIGCK--RCADSCPDGAPFECAHDGKKKKFCINYDYCKGCGVCAYECPVDAIEMVVEE 94 >gi|86749700|ref|YP_486196.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris HaA2] gi|115502514|sp|Q2IWX5|NUOI2_RHOP2 RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|86572728|gb|ABD07285.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris HaA2] Length = 162 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|74312799|ref|YP_311218.1| NADH dehydrogenase subunit I [Shigella sonnei Ss046] gi|110287774|sp|Q3YZS9|NUOI_SHISS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|73856276|gb|AAZ88983.1| NADH dehydrogenase I chain I [Shigella sonnei Ss046] gi|323168550|gb|EFZ54230.1| NADH-quinone oxidoreductase, chain I family protein [Shigella sonnei 53G] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|34558142|ref|NP_907957.1| hydrogenase-3 small subunit [Wolinella succinogenes DSM 1740] gi|34483860|emb|CAE10857.1| HYDROGENASE-3 SMALL SUBUNIT [Wolinella succinogenes] Length = 216 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPG 62 C C C VCP + + + CI C +C CP A I+ + P Sbjct: 54 CRQCDDAPCANVCPTGALRISNQTVELCEEICIGCKLCTIACPYGAVVIEAEVPPS 109 >gi|88811011|ref|ZP_01126267.1| electron transport complex protein RnfB [Nitrococcus mobilis Nb-231] gi|88791550|gb|EAR22661.1| electron transport complex protein RnfB [Nitrococcus mobilis Nb-231] Length = 277 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 111 AWIDETACIGC--TRCIQACPVDAILGTAKQMHTVIRTECTGCALCIAPCPVDCIH 164 >gi|114563344|ref|YP_750857.1| electron transport complex protein RnfB [Shewanella frigidimarina NCIMB 400] gi|114334637|gb|ABI72019.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella frigidimarina NCIMB 400] Length = 193 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD I D C C +C CPVD I Sbjct: 108 AYIREDECIGC--TKCIQACPVDAILGAGKLMHTVIAKD-CTGCDLCVEPCPVDCI 160 >gi|322831991|ref|YP_004212018.1| NADH-quinone oxidoreductase, chain I [Rahnella sp. Y9602] gi|321167192|gb|ADW72891.1| NADH-quinone oxidoreductase, chain I [Rahnella sp. Y9602] Length = 180 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|319936762|ref|ZP_08011175.1| nitroreductase [Coprobacillus sp. 29_1] gi|319808319|gb|EFW04884.1| nitroreductase [Coprobacillus sp. 29_1] Length = 266 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----KPDTEPG 62 E CI C C++ CP + AI ECI CG C CP +A+ D Sbjct: 20 EKCIGC--QMCIKDCPAHNIEFKDKKAAIIDKECIMCGHCVAICPKNAVIISGYTDHPII 77 Query: 63 LELWLKIN 70 E + +N Sbjct: 78 REKDVNLN 85 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + I+ ++CI C +C +CP I+ + Sbjct: 15 VIINKEKCIGCQMCIKDCPAHNIEFKDKKAA 45 >gi|300712347|ref|YP_003738161.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halalkalicoccus jeotgali B3] gi|299126030|gb|ADJ16369.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Halalkalicoccus jeotgali B3] Length = 224 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI-KPDTEPGL 63 C C++ CV VCP + + +N + D CI C C CP A P++ GL Sbjct: 92 CYHCENAPCVSVCPTNALQKKDNGFVEVVDDLCIGCQYCLSACPFGAPQFPESNEGL 148 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 19/69 (27%) Query: 4 VVTENCILCKHTDCVEVCPVDC--FYEGENFLAI------HPDECIDCG---------VC 46 VV + CI C++ C+ CP F E L D+C C C Sbjct: 119 VVDDLCIGCQY--CLSACPFGAPQFPESNEGLTAVVGSGGTMDKCTGCEERQDVGKGPAC 176 Query: 47 EPECPVDAI 55 EC DAI Sbjct: 177 AEECATDAI 185 >gi|268324259|emb|CBH37847.1| conserved hypothetical protein, 4Fe-4S binding domain family [uncultured archaeon] Length = 154 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP--DTEP 61 V +C+ C DCV +CPV + E+ + + +CI C +C CP + D + Sbjct: 51 VAISCMHCSEPDCVAICPVTAITQREDGIVLGDKTKCIGCRLCVTACPFAVPQYPQDLQG 110 Query: 62 GLELW 66 L W Sbjct: 111 DLAEW 115 >gi|258624435|ref|ZP_05719382.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM603] gi|258583282|gb|EEW08084.1| formate-dependent nitrite reductase complex, Fe-S protein [Vibrio mimicus VM603] Length = 212 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H + C+ CG C CP Sbjct: 82 SCQHCENPPCVYVCPTGAAYKDEATGIVDVHKERCVGCGYCLAACPYQ 129 >gi|255527174|ref|ZP_05394059.1| nitroreductase [Clostridium carboxidivorans P7] gi|296186117|ref|ZP_06854522.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] gi|255509129|gb|EET85484.1| nitroreductase [Clostridium carboxidivorans P7] gi|296049385|gb|EFG88814.1| 4Fe-4S binding domain protein [Clostridium carboxidivorans P7] Length = 273 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V TE CI C +C++ C + I+ CI CG C CP +A+ D Sbjct: 1 MMNVNTEKCIGCG--ECIKDCFIRDIEMVNGKAKINNKTCIKCGHCIAICPKNAVSTDE 57 >gi|257063419|ref|YP_003143091.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] gi|256791072|gb|ACV21742.1| DMSO reductase, iron-sulfur subunit [Slackia heliotrinireducens DSM 20476] Length = 214 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPV 52 Y V+ C C + CV CP + + P+ CI CG C CP Sbjct: 60 AYHVSAACNHCANPACVANCPTGAMQKDPETGIVQSDPEVCIGCGTCANTCPY 112 >gi|224370292|ref|YP_002604456.1| putative NADPH-dependent glutamate synthase [Desulfobacterium autotrophicum HRM2] gi|223693009|gb|ACN16292.1| putative NADPH-dependent glutamate synthase [Desulfobacterium autotrophicum HRM2] Length = 690 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 CI C++ C G + D+C+ CG C+ CP D I+ Sbjct: 137 CIGLGD--CIKACKFGALSMGPKGHPIVDDDKCVGCGACQKACPKDIIE 183 >gi|198283730|ref|YP_002220051.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666064|ref|YP_002426361.1| ferredoxin, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248251|gb|ACH83844.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518277|gb|ACK78863.1| ferredoxin, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 71 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C CV CP + + G I PD C C C+ CPVD Sbjct: 1 MALFITDECIDC--AICVAECPNNAIFSGAKHCEIDPDRCTKCEGFFAKPQCQEVCPVDC 58 Query: 55 IKP 57 I P Sbjct: 59 ILP 61 >gi|188533913|ref|YP_001907710.1| electron transport complex protein RnfB [Erwinia tasmaniensis Et1/99] gi|226735419|sp|B2VEQ2|RNFB_ERWT9 RecName: Full=Electron transport complex protein rnfB gi|188028955|emb|CAO96821.1| Electron transport complex protein [Erwinia tasmaniensis Et1/99] Length = 191 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDICTGCDLCVAPCPTDCIE 162 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 111 IDEANCIGCTKCIQACPVDAI 131 >gi|164687260|ref|ZP_02211288.1| hypothetical protein CLOBAR_00901 [Clostridium bartlettii DSM 16795] gi|164603684|gb|EDQ97149.1| hypothetical protein CLOBAR_00901 [Clostridium bartlettii DSM 16795] Length = 584 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V + C C C + CPV + I + CI CG C C +AI+ Sbjct: 531 IVEDKCKGCG--ACKKKCPVSAISGNKKEAHVIDKNICIKCGKCMETCKFNAIE 582 >gi|126700741|ref|YP_001089638.1| putative nitroreductase [Clostridium difficile 630] gi|115252178|emb|CAJ70016.1| putative nitroreductase [Clostridium difficile] Length = 260 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ I +C+ CG C CP AI Sbjct: 14 ELCIGCGL--CKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAI 60 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + + CI CG+C+ +CPV+ I + + Sbjct: 9 IEVDKELCIGCGLCKNDCPVNNIIIENKKS 38 >gi|114569913|ref|YP_756593.1| NADH dehydrogenase subunit I [Maricaulis maris MCS10] gi|122316117|sp|Q0APY2|NUOI_MARMM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|114340375|gb|ABI65655.1| NADH dehydrogenase subunit I [Maricaulis maris MCS10] Length = 162 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAEPRSDGSRRTTRYDIDMTKCIYCGYCQEACPVDAI 117 Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 14/24 (58%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + EP Sbjct: 61 ERCIACKLCEAICPAQAITIEAEP 84 Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C + C E CPVD EG NF Sbjct: 102 CIYCGY--CQEACPVDAIVEGPNF 123 >gi|158319129|ref|YP_001511636.1| indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] gi|158139328|gb|ABW17640.1| Indolepyruvate ferredoxin oxidoreductase [Alkaliphilus oremlandii OhILAs] Length = 592 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C++ CP F + + I +C+ C VC CPV AI Sbjct: 540 EKCIGCK--MCIKTGCPALRFDKETKKVTIDKTQCVGCTVCLQVCPVKAI 587 >gi|92117735|ref|YP_577464.1| NADH dehydrogenase subunit I [Nitrobacter hamburgensis X14] gi|123265191|sp|Q1QL93|NUOI_NITHX RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91800629|gb|ABE63004.1| NADH dehydrogenase subunit I [Nitrobacter hamburgensis X14] Length = 162 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 41 PISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGL--CQEACPVDAIVEGPNF 123 >gi|114045797|ref|YP_736347.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113887239|gb|ABI41290.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 182 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAI 55 +C+ C + C+ CP + + L + + D+C CG+C CP DA+ Sbjct: 60 SCMHCGNPACLIACPAQAYTVRSDGLVVLNRDKCTGCGLCVSACPYDAV 108 >gi|283768793|ref|ZP_06341704.1| 4Fe-4S binding domain protein [Bulleidia extructa W1219] gi|283104579|gb|EFC05952.1| 4Fe-4S binding domain protein [Bulleidia extructa W1219] Length = 288 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDA-IKP 57 TE CI CK CV CPV+ F +N + P CI C C +CPV A I P Sbjct: 211 TEKCIGCK--RCVAACPVNMFAYIDNTIQMVREPKHCILCAECYHQCPVKAVIHP 263 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 31 NFLAIHPDECIDCGVCEPECPVD 53 + I+ ++CI C C CPV+ Sbjct: 205 KKVTINTEKCIGCKRCVAACPVN 227 >gi|282165282|ref|YP_003357667.1| pyruvate synthase delta chain [Methanocella paludicola SANAE] gi|282157596|dbj|BAI62684.1| pyruvate synthase delta chain [Methanocella paludicola SANAE] Length = 94 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E CI CK C + CP YE + I D C CG+C ECPVDAI + E Sbjct: 36 EKCIGCK--RCADSCPDGAPYECAHDGKKKKFCIDYDYCKGCGICAYECPVDAINMEKEE 93 >gi|258404376|ref|YP_003197118.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796603|gb|ACV67540.1| membrane-bound menaquinol oxidoreductase, periplasmic ferredoxin subunit [Desulfohalobium retbaense DSM 5692] Length = 258 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C + CV VCP ++ E+ + + CI C C CP A + Sbjct: 121 CNHCDNPPCVRVCPTRATFQREDGIVMMDFHRCIGCRYCMAGCPFGARSFNFGDPRPHIE 180 Query: 68 KINSEYATQWPNITTKK 84 + N+E+ + + K Sbjct: 181 EENTEFPARMKGVVEKC 197 >gi|147677003|ref|YP_001211218.1| iron only hydrogenase large subunit [Pelotomaculum thermopropionicum SI] gi|146273100|dbj|BAF58849.1| iron only hydrogenase large subunit, C-terminal domain [Pelotomaculum thermopropionicum SI] Length = 530 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 + CILC C+EVC V+ Y + + CI+CG C CP AI + + ++ Sbjct: 91 QKCILCGQ--CLEVCKNVESVYGYYDLPVVDETICINCGQCSMACPSGAI-SERDDTKKV 147 Query: 66 WLKI 69 + + Sbjct: 148 FEAL 151 >gi|21228736|ref|NP_634658.1| putative pyruvate:ferredoxin oxidoreductase [Methanosarcina mazei Go1] gi|20907247|gb|AAM32330.1| putative pyruvate:ferredoxin oxidoreductase [Methanosarcina mazei Go1] Length = 623 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 6 TENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TE+C C CV+ CP GE I D C CG+C CP AI Sbjct: 568 TESCTGCGL--CVKQLGCPALFLPAGEEKPVIQ-DSCSGCGLCAQVCPSGAI 616 >gi|15888607|ref|NP_354288.1| NADH dehydrogenase subunit I [Agrobacterium tumefaciens str. C58] gi|81764054|sp|Q8UFW9|NUOI_AGRT5 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|15156329|gb|AAK87073.1| NADH ubiquinone oxidoreductase chain I [Agrobacterium tumefaciens str. C58] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|117920613|ref|YP_869805.1| electron transport complex protein RnfB [Shewanella sp. ANA-3] gi|166225087|sp|A0KX80|RNFB_SHESA RecName: Full=Electron transport complex protein rnfB gi|117612945|gb|ABK48399.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sp. ANA-3] Length = 193 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTAD-CTGCDLCVEPCPVDCI 159 >gi|330448640|ref|ZP_08312288.1| putative electron transport protein HydN [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492831|dbj|GAA06785.1| putative electron transport protein HydN [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 182 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 2 TYVVT-ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 +V T C C C +VCP + + F+ + CI C C CP A Sbjct: 50 AHVTTPVMCRQCDDAPCAQVCPNNAIVLEDGFVKVIQSRCIGCKTCVIACPYGA 103 >gi|325105659|ref|YP_004275313.1| NADH dehydrogenase subunit I [Pedobacter saltans DSM 12145] gi|324974507|gb|ADY53491.1| NADH dehydrogenase subunit I [Pedobacter saltans DSM 12145] Length = 175 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 19/78 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 72 ERCTACGL--CALSCPAEAITMISAERKKGEENLYREEKYAAVYEINMLRCIFCGLCEEA 129 Query: 50 CPVDAIKPDTEPGLELWL 67 CP +AI D +L Sbjct: 130 CPKEAIYLDGPIVPSDYL 147 >gi|331665199|ref|ZP_08366100.1| putative electron transport protein YsaA [Escherichia coli TA143] gi|331057709|gb|EGI29695.1| putative electron transport protein YsaA [Escherichia coli TA143] Length = 157 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T+ C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|301020224|ref|ZP_07184346.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] gi|300398862|gb|EFJ82400.1| 4Fe-4S binding domain protein [Escherichia coli MS 69-1] Length = 157 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 22/55 (40%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T+ C C+ C VCPVD + + CI C C CP A++ Sbjct: 51 TWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|302694183|ref|XP_003036770.1| hypothetical protein SCHCODRAFT_72253 [Schizophyllum commune H4-8] gi|300110467|gb|EFJ01868.1| hypothetical protein SCHCODRAFT_72253 [Schizophyllum commune H4-8] Length = 236 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 135 ERCIACKL--CEAICPAQAITIESEARADGSRKTTKYDIDMIKCIYCGFCQEACPVDAI 191 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 135 ERCIACKLCEAICPAQAITIESEARAD 161 >gi|298481058|ref|ZP_06999252.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. D22] gi|295083949|emb|CBK65472.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides xylanisolvens XB1A] gi|298272632|gb|EFI14199.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. D22] Length = 304 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T +CI C CV+ CP + N I P++C C C CP ++I Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPNKCKSCRKCVEVCPQNSI 265 Score = 40.5 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|289523836|ref|ZP_06440690.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502926|gb|EFD24090.1| protein HymB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 579 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +CI C C +VCP E + +C+ CG C CP ++I Sbjct: 524 SCIGCGQ--CAKVCPAKAISGEVRKPHVVDALKCVGCGQCMDICPTNSI 570 Score = 40.5 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 12/29 (41%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I+ CI CG C CP AI + Sbjct: 520 INQGSCIGCGQCAKVCPAKAISGEVRKPH 548 >gi|254976689|ref|ZP_05273161.1| putative nitroreductase [Clostridium difficile QCD-66c26] gi|255094072|ref|ZP_05323550.1| putative nitroreductase [Clostridium difficile CIP 107932] gi|255518484|ref|ZP_05386160.1| putative nitroreductase [Clostridium difficile QCD-97b34] gi|255651604|ref|ZP_05398506.1| putative nitroreductase [Clostridium difficile QCD-37x79] gi|306521411|ref|ZP_07407758.1| putative nitroreductase [Clostridium difficile QCD-32g58] Length = 258 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ I +C+ CG C CP AI Sbjct: 12 ELCIGCGL--CKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAI 58 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + + CI CG+C+ +CPV+ I + + Sbjct: 7 IEVDKELCIGCGLCKNDCPVNNIIIENKKS 36 >gi|209363825|ref|YP_001423965.2| NADH dehydrogenase subunit I [Coxiella burnetii Dugway 5J108-111] gi|215919184|ref|NP_820423.2| NADH dehydrogenase subunit I [Coxiella burnetii RSA 493] gi|206584068|gb|AAO90937.2| NADH-quinone oxidoreductase chain I [Coxiella burnetii RSA 493] gi|207081758|gb|ABS78476.2| NADH-quinone oxidoreductase chain I [Coxiella burnetii Dugway 5J108-111] Length = 168 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP G I +CI+CG CE CPVDAI Sbjct: 66 ERCIACKL--CEAVCPACAITIEAGPREADGSRRTTLYDIDAFKCINCGFCEEACPVDAI 123 Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 66 ERCIACKLCEAVCPACAITIEAGP 89 >gi|157144788|ref|YP_001452107.1| NADH dehydrogenase subunit I [Citrobacter koseri ATCC BAA-895] gi|157081993|gb|ABV11671.1| hypothetical protein CKO_00515 [Citrobacter koseri ATCC BAA-895] Length = 180 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|150399059|ref|YP_001322826.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus vannielii SB] gi|150011762|gb|ABR54214.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus vannielii SB] Length = 165 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILC--KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T+ V C+ C C +VCPVD E E L ++ D CI C +C CP+ A Sbjct: 34 THSVPMFCMHCHPDKAPCRQVCPVDAIEEMEGVLIVNEDACILCRLCMIACPIGA 88 >gi|117926901|ref|YP_867518.1| NADH dehydrogenase subunit I [Magnetococcus sp. MC-1] gi|156633523|sp|A0LDR9|NUOI_MAGSM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|117610657|gb|ABK46112.1| NADH dehydrogenase subunit I [Magnetococcus sp. MC-1] Length = 164 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 14/81 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA----IHPDECIDCGVCEPECPVDAI 55 E C+ CK C +CP Y + L I +CI CG+CE CPV+AI Sbjct: 62 ERCVACKL--CEAICPAQAIYIEIDTESRADKRLTKVYDIDLFKCIYCGLCEEACPVEAI 119 Query: 56 KPDTEPGLELWLKINSEYATQ 76 + + N+ + + Sbjct: 120 VMGPYLDM-AYEDRNARFYKK 139 >gi|56476886|ref|YP_158475.1| electron transport complex protein RnfB [Aromatoleum aromaticum EbN1] gi|56312929|emb|CAI07574.1| Electron transport complex protein RnfB [Aromatoleum aromaticum EbN1] Length = 176 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI-KPDTEPGLE 64 E CI C T C++VCP D G + + D C CG C CP +A+ L+ Sbjct: 108 EICIGC--TRCIKVCPTDAILGGPKQIHNVLRDACTGCGSCIERCPTEAMAMQPLPVTLQ 165 Query: 65 LWL 67 W+ Sbjct: 166 QWV 168 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 14/28 (50%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAI 55 EG +I + CI C C CP DAI Sbjct: 98 EGPKVASIREEICIGCTRCIKVCPTDAI 125 >gi|312963650|ref|ZP_07778131.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens WH6] gi|311282159|gb|EFQ60759.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens WH6] Length = 83 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLEL 65 I D Sbjct: 59 IPLDEAHPETQ 69 >gi|297516469|ref|ZP_06934855.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli OP50] Length = 268 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP ++ + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFG 100 >gi|213645876|ref|ZP_03375929.1| NADH dehydrogenase subunit I [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 180 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEY 125 >gi|167624839|ref|YP_001675133.1| dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] gi|167354861|gb|ABZ77474.1| Dimethylsulfoxide reductase chain B [Shewanella halifaxensis HAW-EB4] Length = 221 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + D CI C C CP DA + D Sbjct: 78 AYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAQDLCIGCESCSRACPYDAPQIDR 137 Query: 60 E 60 E Sbjct: 138 E 138 >gi|17545110|ref|NP_518512.1| ferredoxin protein [Ralstonia solanacearum GMI1000] gi|17427401|emb|CAD13919.1| probable ferredoxin protein [Ralstonia solanacearum GMI1000] Length = 82 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G I P +C +C C+ CPV+ Sbjct: 1 MALMITDECINCDV--CEPECPNGAISMGPEIYVIDPGKCTECVGHFDAPQCQQVCPVEC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPND 62 >gi|126439611|ref|YP_001058225.1| ferredoxin [Burkholderia pseudomallei 668] gi|126219104|gb|ABN82610.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia pseudomallei 668] Length = 290 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVVELCTGCDLCVPPCPVDCI 132 >gi|317492085|ref|ZP_07950516.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919968|gb|EFV41296.1| electron transport complex [Enterobacteriaceae bacterium 9_2_54FAA] Length = 202 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ENCI C T C++ CPVD + + D C C +C CP D I Sbjct: 115 ENCIGC--TKCIQACPVDAIVGATRAMHTVVSDLCTGCNLCVAPCPTDCI 162 Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 112 IDEENCIGCTKCIQACPVDAI 132 >gi|238790316|ref|ZP_04634089.1| Protein nrfC [Yersinia frederiksenii ATCC 33641] gi|238721580|gb|EEQ13247.1| Protein nrfC [Yersinia frederiksenii ATCC 33641] Length = 212 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPV 52 +C C CV+VCP Y + + + PD C+ C C CP Sbjct: 80 SCQHCDKAPCVDVCPTGASYRDKKTGIVDVDPDLCVGCQYCIAACPY 126 >gi|255308110|ref|ZP_05352281.1| putative nitroreductase [Clostridium difficile ATCC 43255] Length = 258 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C CPV+ I +C+ CG C CP AI Sbjct: 12 ELCIGCGL--CKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAI 58 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + + CI CG+C+ +CPV+ I + + Sbjct: 7 IEVDKELCIGCGLCKNDCPVNNIIIENKKS 36 >gi|217967483|ref|YP_002352989.1| electron transport complex, RnfABCDGE type, B subunit [Dictyoglomus turgidum DSM 6724] gi|217336582|gb|ACK42375.1| electron transport complex, RnfABCDGE type, B subunit [Dictyoglomus turgidum DSM 6724] Length = 266 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DCV+ CP D + GE+ L I ++C CG+C CP Sbjct: 144 GFGDCVKACPFDAIHMGEDGLPKIDMEKCTGCGLCVKACP 183 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V ++ CI C C +VCP F I + C CG+C +CP A Sbjct: 212 VCSKACIGCG--ICEKVCPKGAIKMDGRFPVIDYNLCDGCGICVEKCPTKA 260 Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 18/68 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCEPEC 50 E C C CV+ CP G + CI CG+CE C Sbjct: 170 EKCTGCGL--CVKACPRGILTLLPVDIPLLLGCKTELPGPEARRVCSKACIGCGICEKVC 227 Query: 51 PVDAIKPD 58 P AIK D Sbjct: 228 PKGAIKMD 235 >gi|169824043|ref|YP_001691654.1| electron transport complex protein [Finegoldia magna ATCC 29328] gi|167830848|dbj|BAG07764.1| electron transport complex protein [Finegoldia magna ATCC 29328] Length = 442 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 21/66 (31%) Query: 7 ENCILCKHTDCVEVCPV------------DCFYEGENFLAIHPDECIDCGVCEPECP--- 51 E CI C CV+VCP+ + +EG + ++ +CI+CG C CP Sbjct: 366 EPCIKC--AKCVDVCPIGLLPLFLQLKSLNGDFEGAEKMHLN--DCIECGTCSYICPSNR 421 Query: 52 --VDAI 55 V+AI Sbjct: 422 PLVEAI 427 >gi|254286422|ref|ZP_04961380.1| iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] gi|150423589|gb|EDN15532.1| iron-sulfur cluster-binding protein [Vibrio cholerae AM-19226] Length = 553 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 T +C LC CV VCP + + L +C+ CG+C CP A Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQA 465 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLK 68 CV+ CP EG + I+P C G C CP +AI + +++ Sbjct: 189 CVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIE 247 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + PD C C C CP A+ + ++IN Sbjct: 166 PKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQIN 213 >gi|158522522|ref|YP_001530392.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] gi|158511348|gb|ABW68315.1| electron transport complex, RnfABCDGE type, B subunit [Desulfococcus oleovorans Hxd3] Length = 672 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 10 ILC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 + C CV CP GEN L + ++C CG CE CP IK Sbjct: 141 VGCLGLGTCVRACPFGALTMGENGLPVVDREKCTGCGTCERVCPKHIIK 189 >gi|134046740|ref|YP_001098225.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132664365|gb|ABO36011.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 395 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT+ C+ C CV CPVD E+ I D+CI C VC CP +AI Sbjct: 128 VTKECVACGV--CVPECPVDAISL-EDIAVIDTDKCIYCTVCSQTCPWNAIF 176 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C+ CVEVCP Y ++ P C CG+C CPV+ I + E Sbjct: 194 VNEEECIGCE--KCVEVCPGSMIEYNAKDLGVNLPLACPACGLCVESCPVEVISLEVE 249 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 14/63 (22%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDE-------CIDCGVCEPECPVDAIK 56 C+LC+ CV++CP + E + P E C+ CGVC PECPVDAI Sbjct: 91 CVLCE--KCVDICPAEIISLPGKVEKPKKEVVIPQEPIAVTKECVACGVCVPECPVDAIS 148 Query: 57 PDT 59 + Sbjct: 149 LED 151 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 T+ CI C T C + CP + + ++ +ECI C C CP I Sbjct: 157 TDKCIYC--TVCSQTCPWNAIFVAGKVPQKRQKTIKSFTVNEEECIGCEKCVEVCPGSMI 214 Query: 56 KPDTEP 61 + + + Sbjct: 215 EYNAKD 220 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%) Query: 8 NCILCKHTDCVEVCPVDCFYE----------GENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CVE CPV+ + L ++C CG C +CP AIK Sbjct: 228 ACPACGL--CVESCPVEVISLEVEYASAKPVTDEGLVWLEEKCAYCGPCAIKCPTGAIKV 285 Query: 58 DTEPGLEL 65 GLEL Sbjct: 286 VNPKGLEL 293 Score = 34.0 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 8/48 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C++C C + CP + CI C C CP A Sbjct: 9 DACLVCN--ACAKACPTEAIEIAPFK------TCIQCFSCANACPTGA 48 >gi|10945077|emb|CAC14151.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium meliloti] Length = 210 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC I C+ CG+CE CP DAI Sbjct: 90 CVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 144 >gi|85860212|ref|YP_462414.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] gi|85723303|gb|ABC78246.1| formate dehydrogenase iron-sulfur subunit [Syntrophus aciditrophicus SB] Length = 263 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C+ C + CV+VCP + E ++ + CI C C CP + + D E Sbjct: 72 DGCMHCTNAACVKVCPSGALHYTEVGTVGLNHELCIGCKECVSACPFNIPRYDRETD 128 >gi|42520793|ref|NP_966708.1| NADH dehydrogenase subunit I [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034611|ref|ZP_01314569.1| hypothetical protein Wendoof_01000619 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|81652312|sp|Q73GH4|NUOI_WOLPM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|42410533|gb|AAS14642.1| NADH dehydrogenase I, I subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 169 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 68 ERCIACKL--CEVICPAQAIVIEAEEREDGSRRTTRYDIDMIKCIYCGLCQEACPVDAI 124 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 68 ERCIACKLCEVICPAQAIVIEAEERED 94 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 109 CIYCGL--CQEACPVDAIVEGPNF 130 >gi|51893738|ref|YP_076429.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51857427|dbj|BAD41585.1| formate dehydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 263 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C C VC N I D+CI C C+ CP K + + Sbjct: 73 CMHCLEPACESVCIAGAIKRQANGAVTIDHDKCIGCRYCQLGCPFGVPKYEYDKP 127 >gi|148264539|ref|YP_001231245.1| glutamate synthase (NADPH) [Geobacter uraniireducens Rf4] gi|146398039|gb|ABQ26672.1| glutamate synthase (NADPH) GltB2 subunit [Geobacter uraniireducens Rf4] Length = 509 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Query: 9 CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI CK C+ C + + + ++ L CI C C CP AI Sbjct: 22 CIRCKV--CIRQCAYEVHSYIDADDVLVEDSTSCIGCRRCSALCPTGAIT---------- 69 Query: 67 LKINSEYATQ 76 +++N E + Sbjct: 70 IRLNEENFKK 79 >gi|332526726|ref|ZP_08402828.1| RnfABCDGE type electron transport complex subunit B [Rubrivivax benzoatilyticus JA2] gi|332111129|gb|EGJ11161.1| RnfABCDGE type electron transport complex subunit B [Rubrivivax benzoatilyticus JA2] Length = 219 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVDC I C CG+C P CPVD I Sbjct: 85 CIGC--TLCLKACPVDCIVGANKRMHTVIDA-LCTGCGLCLPACPVDCI 130 >gi|283853033|ref|ZP_06370290.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283571570|gb|EFC19573.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 652 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 26/86 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 TYV E C C C E CP D F E I P C Sbjct: 235 TYVDWELCTGCG--ACTEKCPSKKNPDAFNEKIGPTTSINIPFPQAIPKKAVIDPTTCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPGL 63 CGVC CP AI+ D L Sbjct: 293 FVKGKCGVCAKVCPTGAIRYDMTDEL 318 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C+ CP E G+ + C CG+C CP AI+ + Sbjct: 584 CVGCG--KCIITCPFKAIKEVEFRGQKKAEVIETVCQGCGLCTSTCPQGAIQLSHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 >gi|322419348|ref|YP_004198571.1| hypothetical protein GM18_1832 [Geobacter sp. M18] gi|320125735|gb|ADW13295.1| hypothetical protein GM18_1832 [Geobacter sp. M18] Length = 222 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C+ CV CP++ ++ N + + D+C G C P CP A D G Sbjct: 90 CNHCEDPRCVPACPLEATFKLPNGIVVTDWDKCEGYGACVPACPYGARFLDERHG 144 >gi|308234259|ref|ZP_07664996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Atopobium vaginae DSM 15829] gi|328943810|ref|ZP_08241275.1| hypothetical protein HMPREF0091_10500 [Atopobium vaginae DSM 15829] gi|327491779|gb|EGF23553.1| hypothetical protein HMPREF0091_10500 [Atopobium vaginae DSM 15829] Length = 438 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++VCPVD + + D C CG+C CP +A Sbjct: 78 CTCHACMDVCPVDAI-DIKGSTVKIADTCRACGLCIAACPTEA 119 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 C +C + C VCPV+ E+ ++ C++C C CP I Sbjct: 335 ACTVC--SACTRVCPVNACNLDEHGRFSVQTAYCVNCSACALVCPEQCI 381 >gi|225026051|ref|ZP_03715243.1| hypothetical protein EUBHAL_00290 [Eubacterium hallii DSM 3353] gi|224956626|gb|EEG37835.1| hypothetical protein EUBHAL_00290 [Eubacterium hallii DSM 3353] Length = 304 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ C C+E+CP N + I+P C C C ECP A++ + E Sbjct: 59 EKCVRC--HHCMEICPKKAITFFSNEIKINPYICNGCQKCIEECPARALQAEGEE 111 >gi|124028230|ref|YP_001013550.1| hypothetical protein Hbut_1380 [Hyperthermus butylicus DSM 5456] gi|123978924|gb|ABM81205.1| hypothetical protein Hbut_1380 [Hyperthermus butylicus DSM 5456] Length = 342 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 12/58 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECI-----DCGVCEPECPVD 53 T C LC +CV+VCP E I PD C+ DC C CP Sbjct: 157 TNPCTLC--MECVKVCPTGALAETPEDGVSGVAIIDPDLCLAWNSGDCKSCAKACPYG 212 >gi|313682655|ref|YP_004060393.1| hypothetical protein Sulku_1531 [Sulfuricurvum kujiense DSM 16994] gi|313155515|gb|ADR34193.1| hypothetical protein Sulku_1531 [Sulfuricurvum kujiense DSM 16994] Length = 124 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 16/74 (21%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF-YEGE------NFLAIHPDECIDCG------VCE 47 M ++T+ CI C C+EVCPV EG+ + + P++CI+C C Sbjct: 1 MAVMITDLCINCD--ACIEVCPVSAIVSEGDSPRDDWEYTYVKPEKCIECVGHAEVPACA 58 Query: 48 PECPVD-AIKPDTE 60 ECP + I D Sbjct: 59 AECPTEGCIVWDMP 72 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + D CI+C C CPV AI + + + W Sbjct: 1 MAVMITDLCINCDACIEVCPVSAIVSEGDSPRDDW 35 >gi|300691033|ref|YP_003752028.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] gi|299078093|emb|CBJ50736.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum PSI07] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIESDLRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI +++ Sbjct: 62 ERCIACKLCEAVCPALAITIESD 84 >gi|170766578|ref|ZP_02901031.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] gi|170124016|gb|EDS92947.1| 4Fe-4S binding domain protein [Escherichia albertii TW07627] Length = 157 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T+ C C+ C VCPV + + CI C C CP A++ Sbjct: 51 TWTTAVACHQCEDAPCANVCPVGAIRREHEHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|159043051|ref|YP_001531845.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157910811|gb|ABV92244.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dinoroseobacter shibae DFL 12] Length = 672 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V E C LC C VCP + L C+ CG+C CP AI + Sbjct: 518 VDPEACTLC--QACTGVCPTGALLDNPETPMLRFTESACVQCGLCAATCPETAITLTPQL 575 Query: 62 GLELW 66 W Sbjct: 576 DFAAW 580 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 14/34 (41%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP 48 T C+ +CP + + I P C CG C Sbjct: 288 TRCLSLCPTGAITPNGDSVQIDPAICAGCGQCAA 321 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 15/34 (44%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 + P+ C C C CP A+ + E + + + Sbjct: 518 VDPEACTLCQACTGVCPTGALLDNPETPMLRFTE 551 >gi|73540045|ref|YP_294565.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] gi|72117458|gb|AAZ59721.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ralstonia eutropha JMP134] Length = 86 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + G I P++C +C C+ CPV Sbjct: 1 MALLITDDCINCDV--CEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVAC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|26250216|ref|NP_756256.1| putative electron transport protein ysaA [Escherichia coli CFT073] gi|293417021|ref|ZP_06659658.1| electron transporter HydN [Escherichia coli B185] gi|331649404|ref|ZP_08350490.1| putative electron transport protein YsaA [Escherichia coli M605] gi|26110645|gb|AAN82830.1|AE016768_248 Putative electron transport protein ysaA [Escherichia coli CFT073] gi|291431597|gb|EFF04582.1| electron transporter HydN [Escherichia coli B185] gi|331041902|gb|EGI14046.1| putative electron transport protein YsaA [Escherichia coli M605] Length = 159 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 59 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 107 >gi|157163051|ref|YP_001460369.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli HS] gi|312972149|ref|ZP_07786323.1| iron-sulfur protein [Escherichia coli 1827-70] gi|157068731|gb|ABV07986.1| 4Fe-4S binding domain protein [Escherichia coli HS] gi|310334526|gb|EFQ00731.1| iron-sulfur protein [Escherichia coli 1827-70] gi|332345542|gb|AEE58876.1| iron-sulfur protein [Escherichia coli UMNK88] Length = 157 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 21/49 (42%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREQGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|303242581|ref|ZP_07329058.1| putative PAS/PAC sensor protein [Acetivibrio cellulolyticus CD2] gi|302589885|gb|EFL59656.1| putative PAS/PAC sensor protein [Acetivibrio cellulolyticus CD2] Length = 556 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Query: 1 MT-YVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--I 55 MT Y+VT NC C C+ CPV + I DEC+ CG C CP +A I Sbjct: 1 MTEYLVTKNSNCKNC--YKCIRHCPVKSLKFTDGQAHIVKDECVLCGECYVVCPQNAKQI 58 Query: 56 KPDTEPGLEL 65 + D E +L Sbjct: 59 RQDVEKAKQL 68 >gi|301064114|ref|ZP_07204561.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] gi|300441734|gb|EFK06052.1| CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [delta proteobacterium NaphS2] Length = 912 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVD--CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V TE C +C CV CP I C CG+C ECP AI Sbjct: 840 VNTEKCAVC--CTCVRTCPFQIPVIDREIGAAFIDASLCRGCGMCVAECPGKAIF 892 >gi|300310950|ref|YP_003775042.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] gi|300073735|gb|ADJ63134.1| ferredoxin [4Fe-4S]-type protein [Herbaspirillum seropedicae SmR1] Length = 240 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPDT- 59 V+ E CI C T C++ CPVD + I C C +C CPVD I Sbjct: 86 VIDEAVCIGC--TLCIQACPVDAIAGAAKQMHTVIDA-LCTGCDLCVAPCPVDCISMVEV 142 Query: 60 ---EPGLELWLKINSEYAT 75 G + W + ++ A Sbjct: 143 TPGRTGWQAWRQEQADAAR 161 >gi|294496337|ref|YP_003542830.1| electron transport complex, RnfABCDGE type subunit beta [Methanohalophilus mahii DSM 5219] gi|292667336|gb|ADE37185.1| electron transport complex, RnfABCDGE type, B subunit [Methanohalophilus mahii DSM 5219] Length = 265 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI CK C + CPVD + + I ++CI CG C +CP I+ Sbjct: 218 CIGCKL--CEKACPVDAVHVTKFLAEIDQEKCISCGKCVEKCPQGCIE 263 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVD 53 CV VCP D + G++ L I+ + C CG+C CP D Sbjct: 149 CVRVCPFDAIHIGDDRLPKINKNLCTSCGICIASCPND 186 >gi|296109959|ref|YP_003616908.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] gi|295434773|gb|ADG13944.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus infernus ME] Length = 365 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 3 YVV-TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YVV E+CI C C +VC + I PD+CI CG+CE ECPVD IK Sbjct: 265 YVVLEEDCIGC--RACYKVCKFGAITISKKTKLPYILPDKCIVCGLCERECPVDTIKLVN 322 Query: 60 EPGLELWLKI 69 + KI Sbjct: 323 IDEAKKMAKI 332 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++V CI C +CVEVCP + E + C++C C CP AI+ EP Sbjct: 204 PHIVKSLCIACL--NCVEVCPGEIDIEKGEII-----SCLNCFYCLEVCPTTAIRVRKEP 256 Query: 62 GLELWLK 68 + +K Sbjct: 257 IAKEKVK 263 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 17/65 (26%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGE-------NFLAIHPDECIDCGVCEPECP 51 ++CI C +CVEVCP EG+ ++L I + C +CG CE CP Sbjct: 77 DSCIACL--NCVEVCPTGVLELDKHRVSVEGQPFSVPKFHYLQIDEEVCANCGKCERACP 134 Query: 52 VDAIK 56 + I Sbjct: 135 IGVIH 139 Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV-DAIKPDTEPGL 63 E C C C CP+ ++ E I + CI C C CP+ +AI TE + Sbjct: 121 EVCANCG--KCERACPIGVIHKTEKAYKIDVERCITCKRCLEVCPLKNAIVVFTEEEM 176 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPD 58 E CI C+ C E CP E I D CI C C CP ++ D Sbjct: 45 EKCISCE--ACKESCPAKAIEMVEREKKIPNIEVDSCIACLNCVEVCPTGVLELD 97 Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 10/56 (17%) Query: 8 NCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAI 55 +C+ C + C+EVCP E + ++CI C C C AI Sbjct: 234 SCLNCFY--CLEVCPTTAIRVRKEPIAKEKVKCYVVLEEDCIGCRACYKVCKFGAI 287 >gi|257062986|ref|YP_003142658.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256790639|gb|ACV21309.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVD 53 T +C C C + CP ++ E+ L + D+CI C C CP Sbjct: 64 TVSCQHCDDPACAKACPTGATHKREDGLVVQDYDKCIGCRNCMIACPYT 112 >gi|168818961|ref|ZP_02830961.1| anaeroBic dimethyl sulfoxide reductase chain b [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343944|gb|EDZ30708.1| anaeroBic dimethyl sulfoxide reductase chain b [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084704|emb|CBY94495.1| probable anaerobic dimethyl sulfoxide reductase chain ynfG DMSO reductase iron-sulfur subunit ynfG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 182 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 ++ +C C C++VCP + + + + + + CI C +C CP A D + G Sbjct: 52 FISMSCNHCDDPQCMKVCPAGTYTKRADGIVVQDHERCIGCRMCIMACPWSAPVYDPQEG 111 >gi|164688323|ref|ZP_02212351.1| hypothetical protein CLOBAR_01968 [Clostridium bartlettii DSM 16795] gi|164602736|gb|EDQ96201.1| hypothetical protein CLOBAR_01968 [Clostridium bartlettii DSM 16795] Length = 421 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAI 55 V E+C+ C C + CP+D G + I D C+ CGVC C +I Sbjct: 287 VNDESCVKCG--KCEKACPIDAISLIKDENGNKKVDIDYDVCLGCGVCARNCHKGSI 341 >gi|149922403|ref|ZP_01910837.1| Carbamoyltransferase [Plesiocystis pacifica SIR-1] gi|149816765|gb|EDM76255.1| Carbamoyltransferase [Plesiocystis pacifica SIR-1] Length = 1175 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 9/62 (14%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY------EGENFL-AIHPDECIDCGVCEPECPVDAI 55 +V C+ CV +CP EG L I C+ C +C C V+A+ Sbjct: 514 WVDESRCVGSGD--CVRICPTGAVSFAEPSSEGARRLPVIDASACVRCQLCVERCEVEAL 571 Query: 56 KP 57 +P Sbjct: 572 RP 573 >gi|124028304|ref|YP_001013624.1| indolepyruvate oxidoreductase subunit [Hyperthermus butylicus DSM 5456] gi|123978998|gb|ABM81279.1| indolepyruvate oxidoreductase subunit [Hyperthermus butylicus DSM 5456] Length = 632 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 4 VVTENCILCKHTDCVEV--CPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 VV E C C CV+V CP Y E+ I ++C CG+C CP AI Sbjct: 574 VVPEKCTSC--MACVKVTGCP--ALYVTEDGKVGIVEEDCTGCGLCARFCPYGAI 624 >gi|52548771|gb|AAU82620.1| heterodisulfide reductase subunit A and related polyferredoxins [uncultured archaeon GZfos18F2] Length = 928 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +V C C CV +CP F E I C CG+C C AI Sbjct: 852 AHVDAAACSSCGV--CVSICPYSAPRFNEKTGRAEIESALCKGCGLCTASCRSGAIHLSG 909 Query: 60 EPGLELWLKI 69 +++ +I Sbjct: 910 FDNDQVFSQI 919 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 25/82 (30%), Gaps = 25/82 (30%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL------------------AIHPDECI--- 41 YV T CI C C E CP E + L I D CI Sbjct: 21 YVDTTKCIACGL--CAEKCPKKVPNEYDGGLSKRKAIYVKYPQAVPLKYVIDRDHCIFFK 78 Query: 42 --DCGVCEPECPVDAIKPDTEP 61 C CE CP A+ D Sbjct: 79 KGKCRACEKFCPSGAVNFDDSE 100 >gi|78187016|ref|YP_375059.1| ferredoxin [Chlorobium luteolum DSM 273] gi|78166918|gb|ABB24016.1| Electron transport complex, RnfABCDGE type, B subunit [Chlorobium luteolum DSM 273] Length = 277 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C+ C + + I D C CG C P CP + + +++ Sbjct: 142 SCIGLG--SCIAWCDFNAMRIENGLIVIDSDLCTGCGACIPACPTGVLVMQDKKADRIFI 199 Query: 68 KIN 70 N Sbjct: 200 ACN 202 Score = 41.3 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPV 52 CI C CV+ CP + I ++C CG C CP Sbjct: 218 CIAC--QKCVKECPEQAIVIEDFVARIIQEKCTSCGKCIEVCPT 259 >gi|83590235|ref|YP_430244.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573149|gb|ABC19701.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 182 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKP 57 Y ++ C C CV CP Y+ E+ + + ++CI C C CP A + Sbjct: 52 YHISLGCNHCAQAPCVRNCPTGALYKREDGIVMQDRNKCIGCRYCVWSCPYGAPQY 107 >gi|327400613|ref|YP_004341452.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316121|gb|AEA46737.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 572 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQ 76 CP + L I+ + C CG C CPV AI+ P L KI++ + + Sbjct: 239 SCPTGSIERYNDGLKINLESCTGCGFCAAVCPVSAIRNTILPSEVLLEKIDAALSAE 295 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 6/57 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCF---YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + + C LC C CP + E L H C C +C CP +AIK + Sbjct: 443 IGDTCTLC--RACASFCPANAIVRDIENGRILFTHA-LCFACNLCVGVCPENAIKLE 496 >gi|269102700|ref|ZP_06155397.1| iron-sulfur cluster-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162598|gb|EEZ41094.1| iron-sulfur cluster-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 552 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 6 TENCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++C LC CV VCP + L I D CI CG+C+ CP + I + Sbjct: 417 ADDCTLCMG--CVAVCPTRALHAIGDRPGLLFIEED-CIQCGMCQKACPENVITVE 469 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Query: 17 CVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C++ CP + + I+P C G C CP +AI + Sbjct: 194 CLDACPAGAISANADQEIEINPYLCQGVGTCATACPTEAITYALPDADD 242 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 22/76 (28%), Gaps = 17/76 (22%) Query: 30 ENFLAIHPDECI-------DCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITT 82 + +PD C C C CP AI + + ++IN T Sbjct: 171 PKYFRFNPDLCAHASRGVEGCDRCLDACPAGAISANADQE----IEINPYLCQGVGTCAT 226 Query: 83 KKE------SLPSAAK 92 +LP A Sbjct: 227 ACPTEAITYALPDADD 242 >gi|255322915|ref|ZP_05364055.1| sulfur reductase FeS subunit [Campylobacter showae RM3277] gi|255300027|gb|EET79304.1| sulfur reductase FeS subunit [Campylobacter showae RM3277] Length = 189 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +C++C+ CV VCP ++ + + C+ C C CP DA Sbjct: 58 SCVMCEDAPCVTVCPTGASFQTAEGIVLLDHSTCVSCKYCILACPYDA 105 >gi|255102248|ref|ZP_05331225.1| putative nitroreductase [Clostridium difficile QCD-63q42] Length = 258 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK---PDTEP 61 E CI C C CPV+ I +C+ CG C CP AI D P Sbjct: 12 ELCIGCGL--CKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAIALTGFDEPP 67 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + + + CI CG+C+ +CPV+ I + + Sbjct: 7 IEVDKELCIGCGLCKNDCPVNNIIIENKKS 36 >gi|257060127|ref|YP_003138015.1| XRE family transcriptional regulator [Cyanothece sp. PCC 8802] gi|256590293|gb|ACV01180.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 8802] Length = 534 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M+Y +T++C C T C CP D +I C +C G C +CP+ + Sbjct: 1 MSYTITDSCPNC--TSCQIDCPTDAIQLHNGAYSIDEKLCNNCQGYYAEPQCIIQCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PIP 61 >gi|190571400|ref|YP_001975758.1| NADH dehydrogenase I, I subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357672|emb|CAQ55116.1| NADH dehydrogenase I, I subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 160 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 59 ERCIACKL--CEVICPAQAIVIEAEEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 115 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 59 ERCIACKLCEVICPAQAIVIEAEERED 85 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 100 CIYCGL--CQEACPVDAIVEGPNF 121 >gi|218247058|ref|YP_002372429.1| XRE family transcriptional regulator [Cyanothece sp. PCC 8801] gi|218167536|gb|ACK66273.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 8801] Length = 534 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M+Y +T++C C T C CP D +I C +C G C +CP+ + Sbjct: 1 MSYTITDSCPNC--TSCQIDCPTDAIQLHNGAYSIDEKLCNNCQGYYAEPQCIIQCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PIP 61 >gi|168212266|ref|ZP_02637891.1| nitroreductase family protein [Clostridium perfringens CPE str. F4969] gi|170716002|gb|EDT28184.1| nitroreductase family protein [Clostridium perfringens CPE str. F4969] Length = 272 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V T CI C T C++ C V + I CI+CG C CP +A+ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMVDGKAHIKNKSCIECGHCIAICPKEAVSDSD 57 >gi|195952686|ref|YP_002120976.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932298|gb|ACG56998.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 223 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C++T C CP Y+ E + ++ + CI C C CP A P ++ Sbjct: 64 CMQCQNTPCYYACPTGATYKTEEGIVLVNHERCIGCEACVIACPYGARYPYESDDVDECE 123 Query: 68 KINSEYATQ-WPNITT 82 K+ E A P+I Sbjct: 124 KLYGEEARHTTPHIDK 139 >gi|114569704|ref|YP_756384.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Maricaulis maris MCS10] gi|114340166|gb|ABI65446.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Maricaulis maris MCS10] Length = 493 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 16/70 (22%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKPD 58 +CI CK CV VCP+ L ECI C +C C P I + Sbjct: 279 DCIDCKQ--CVAVCPMGIDIRDGAQL-----ECIQCALCIDACDDIMAKVDRPTGLITYE 331 Query: 59 TEPGLELWLK 68 T+ ++ ++ Sbjct: 332 TDDNVDRFVA 341 >gi|15803422|ref|NP_289455.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 EDL933] gi|15833012|ref|NP_311785.1| oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|217327883|ref|ZP_03443966.1| 4Fe-4S binding protein [Escherichia coli O157:H7 str. TW14588] gi|254794837|ref|YP_003079674.1| putative oxidoreductase [Escherichia coli O157:H7 str. TW14359] gi|12517409|gb|AAG58014.1|AE005518_8 putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EDL933] gi|13363230|dbj|BAB37181.1| putative oxidoreductase Fe-S subunit [Escherichia coli O157:H7 str. Sakai] gi|209760648|gb|ACI78636.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760650|gb|ACI78637.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760652|gb|ACI78638.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760654|gb|ACI78639.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|209760656|gb|ACI78640.1| putative oxidoreductase Fe-S subunit [Escherichia coli] gi|217320250|gb|EEC28675.1| 4Fe-4S binding protein [Escherichia coli O157:H7 str. TW14588] gi|254594237|gb|ACT73598.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O157:H7 str. TW14359] gi|320189228|gb|EFW63887.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. EC1212] gi|326339031|gb|EGD62846.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. 1044] gi|326343086|gb|EGD66854.1| putative oxidoreductase, Fe-S subunit [Escherichia coli O157:H7 str. 1125] Length = 131 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 24 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 78 >gi|121601727|ref|YP_989078.1| NADH dehydrogenase subunit I [Bartonella bacilliformis KC583] gi|156632577|sp|A1USX5|NUOI_BARBK RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|120613904|gb|ABM44505.1| NADH dehydrogenase (quinone), I subunit [Bartonella bacilliformis KC583] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPV+AI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVEAI 118 >gi|113474436|ref|YP_720497.1| 4Fe-4S ferredoxin, iron-sulfur binding [Trichodesmium erythraeum IMS101] gi|110165484|gb|ABG50024.1| 4Fe-4S ferredoxin, iron-sulfur binding [Trichodesmium erythraeum IMS101] Length = 75 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPDECIDCGVCEPECPVD 53 M + + N I DC CPV C + G ++ + D CIDCG+C CPV+ Sbjct: 1 MPHTIVTN-ICEGVADCANACPVACIHSGPGKNNKGTDWYWVDFDSCIDCGICLEVCPVE 59 Query: 54 -AIKPDTEPGLEL 65 A+ + P L+ Sbjct: 60 KAVLAEERPELQQ 72 >gi|320662092|gb|EFX29493.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli O55:H7 str. USDA 5905] Length = 303 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 60 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 116 >gi|303235326|ref|ZP_07321944.1| putative electron transport complex protein RnfC [Finegoldia magna BVS033A4] gi|302493640|gb|EFL53428.1| putative electron transport complex protein RnfC [Finegoldia magna BVS033A4] Length = 442 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 21/66 (31%) Query: 7 ENCILCKHTDCVEVCPV------------DCFYEGENFLAIHPDECIDCGVCEPECP--- 51 E CI C CV+VCP+ + +EG + ++ +CI+CG C CP Sbjct: 366 EPCIKC--AKCVDVCPIGLLPLFLQLKSLNGDFEGAEKMHLN--DCIECGTCSYICPSNR 421 Query: 52 --VDAI 55 V+AI Sbjct: 422 PLVEAI 427 >gi|224368798|ref|YP_002602959.1| FAD-dependent oxidoreductase (4Fe-4S ferredoxin cluster binding protein) [Desulfobacterium autotrophicum HRM2] gi|223691514|gb|ACN14797.1| FAD-dependent oxidoreductase (4Fe-4S ferredoxin cluster binding protein) [Desulfobacterium autotrophicum HRM2] Length = 689 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 10 ILC-KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 I C CV+ C G++ L + P++C CG CE CP I+ Sbjct: 136 IGCLGLGTCVKACLFGALTMGKDSLPKVDPEKCTGCGACERACPKHIIR 184 >gi|152993080|ref|YP_001358801.1| molybdopterin oxidoreductase, iron sulfur subunit [Sulfurovum sp. NBC37-1] gi|151424941|dbj|BAF72444.1| molybdopterin oxidoreductase, iron sulfur subunit [Sulfurovum sp. NBC37-1] Length = 535 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVD 53 +C C +C+ CP + + + +N + H D CI C C CP + Sbjct: 95 SCNHCIDPECLRGCPTESYIKLDNGIVWHDDPSCIGCQYCTWNCPYE 141 >gi|154253657|ref|YP_001414481.1| NADH dehydrogenase subunit I [Parvibaculum lavamentivorans DS-1] gi|171769682|sp|A7HY41|NUOI_PARL1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|154157607|gb|ABS64824.1| NADH-quinone oxidoreductase, chain I [Parvibaculum lavamentivorans DS-1] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPALAITIEAGPRRNDGTRRTTRYDIDMTKCIYCGLCQEACPVDAI 118 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL N A Sbjct: 119 VEGPNFEFATETREELMYDKNRLLA 143 >gi|118444096|ref|YP_877287.1| electron transfer flavoprotein, alpha subunit [Clostridium novyi NT] gi|118134552|gb|ABK61596.1| electron transfer flavoprotein, alpha subunit [Clostridium novyi NT] Length = 396 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ CK C CP E EN AI D C CG C C +AI+ Sbjct: 9 DKCVGCK--ICANTCPFGAI-EIENKKAIIKDNCTLCGSCINVCKFNAIE 55 Score = 37.8 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I D+C+ C +C CP AI+ + Sbjct: 6 ILKDKCVGCKICANTCPFGAIEIE 29 >gi|90425539|ref|YP_533909.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris BisB18] gi|115502515|sp|Q20Z46|NUOI2_RHOPB RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|90107553|gb|ABD89590.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris BisB18] Length = 171 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAVACPVGCIDLSKAVAEDGRWYPEHFRINFARCIFCGYCEEACPTAAIQ 106 Query: 57 PDTEPGLELW 66 + L W Sbjct: 107 LTPDFELSEW 116 >gi|323189383|gb|EFZ74665.1| iron-sulfur protein [Escherichia coli RN587/1] Length = 157 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|301309380|ref|ZP_07215322.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|300832469|gb|EFK63097.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 309 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + CI C C +CP ++F + C+ C CE CP +AIK Sbjct: 59 IKNKCIGCG--RCEAICPRGNISIQDHFPVFNRQACVACKACERICPQNAIKF 109 >gi|300716527|ref|YP_003741330.1| Electron transport complex protein [Erwinia billingiae Eb661] gi|299062363|emb|CAX59480.1| Electron transport complex protein [Erwinia billingiae Eb661] Length = 191 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ ENCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 AWIDEENCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 162 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 23 VDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + E E +A I + CI C C CPVDAI Sbjct: 98 DEAVLEPERKVAWIDEENCIGCTKCIQACPVDAI 131 >gi|298530425|ref|ZP_07017827.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509799|gb|EFI33703.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 99 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 C+ C CV+VCP F GE + P C++CG C CP AIK Sbjct: 20 CMGCG--SCVQVCPHRVFDVGEQKAVLLDPGGCMECGACALNCPAGAIK 66 >gi|167835950|ref|ZP_02462833.1| ferredoxin [Burkholderia thailandensis MSMB43] Length = 170 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|218781191|ref|YP_002432509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762575|gb|ACL05041.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 390 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI------KPDT 59 ++ C+LC C + CP ++ + I +CI CG+C C A+ K +T Sbjct: 298 SDKCVLCG--KCEKRCPTQAIKIKKDAVKIDLGKCIGCGLCAAACKPGALTMAPKTKQET 355 Query: 60 EPGL 63 P Sbjct: 356 PPED 359 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 + D+C+ CG CE CP AIK Sbjct: 296 LDSDKCVLCGKCEKRCPTQAIK 317 >gi|162605692|ref|XP_001713361.1| RNase L inhibitor [Guillardia theta] gi|13794293|gb|AAK39670.1|AF083031_27 RNase L inhibitor [Guillardia theta] Length = 598 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Query: 7 ENCI--LCKHTDCVEVCPVD-----CFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C + +C + CPV+ C + N + IH CI CG+C +CP DAIK Sbjct: 19 DKCNPNKC-NKECKKNCPVEKAGKLCIKIEDSNNIVNIHEINCIGCGICVKKCPYDAIK 76 >gi|330830240|ref|YP_004393192.1| putative NADH:ubiquinone oxidoreductase subunit RnfB [Aeromonas veronii B565] gi|328805376|gb|AEB50575.1| Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Aeromonas veronii B565] Length = 192 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + +EC C +C CP D I+ Sbjct: 109 AFIHEDQCIGC--TKCIQACPVDAIVGATKAMHTVIANECTGCDLCVDPCPTDCIE 162 >gi|294053884|ref|YP_003547542.1| DMSO reductase anchor subunit (DmsC) [Coraliomargarita akajimensis DSM 45221] gi|293613217|gb|ADE53372.1| DMSO reductase anchor subunit (DmsC) [Coraliomargarita akajimensis DSM 45221] Length = 514 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN-FLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C C+ CPV + + E + H D+CI C C +CP D K Sbjct: 95 TVTTACHHCADPGCLNGCPVLAYEKDEETGIVRHLDDQCIGCQYCILKCPYDVPKY 150 >gi|281353400|gb|EFB28984.1| hypothetical protein PANDA_010241 [Ailuropoda melanoleuca] Length = 174 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 73 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 129 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 73 ERCIACKLCEAVCPAQAITIEAEPRAD 99 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 114 CIYCGF--CQEACPVDAIVEGPNF 135 >gi|206890184|ref|YP_002248752.1| NADH-ubiquinone oxidoreductase 23 kda subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742122|gb|ACI21179.1| NADH-ubiquinone oxidoreductase 23 kda subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 198 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 23/97 (23%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----EGENFLA-----IHPDECIDCGVCEPECPV 52 + + CI C C VCP C Y + EN + I CI C C CPV Sbjct: 56 PFTDKDKCIGC--MRCTTVCPSRCIYIKREKTENKMVVTDYIIDASRCIFCAYCVEACPV 113 Query: 53 DAIKPDTEPGLELWLKIN------------SEYATQW 77 A+ + + + N E+A++W Sbjct: 114 CALVLTEDFEYSSYTRNNLIFNKEQLLKNWDEFASKW 150 >gi|207723881|ref|YP_002254279.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum MolK2] gi|206589086|emb|CAQ36048.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum MolK2] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 62 ERCIACKLCEAVCPALAITIESDQRDD 88 >gi|157364004|ref|YP_001470771.1| glycyl-radical activating family protein [Thermotoga lettingae TMO] gi|157314608|gb|ABV33707.1| glycyl-radical enzyme activating protein family [Thermotoga lettingae TMO] Length = 298 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV C + ++ L ++ D C CG C CP A+K Sbjct: 54 CIHC--QSCVVSCKKEALSFKDDILFLNKDLCSLCGACTEICPTTALK 99 >gi|160881916|ref|YP_001560884.1| Fe-S cluster domain-containing protein [Clostridium phytofermentans ISDg] gi|160430582|gb|ABX44145.1| Fe-S cluster domain protein [Clostridium phytofermentans ISDg] Length = 427 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C +C++ CP + I + CIDCG C CP A Sbjct: 17 CKGC--INCIKRCPTEAIRVRNQKAVITKEFCIDCGECIRICPHHA 60 >gi|15965027|ref|NP_385380.1| NADH dehydrogenase subunit I [Sinorhizobium meliloti 1021] gi|81634769|sp|Q92QP4|NUOI1_RHIME RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|15074206|emb|CAC45853.1| Probable NADH-ubiquinone oxidoreductase chain I [Sinorhizobium meliloti 1021] Length = 164 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 119 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 43 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 85 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|330829269|ref|YP_004392221.1| anaerobic sulfite reductase subunit C [Aeromonas veronii B565] gi|328804405|gb|AEB49604.1| Anaerobic sulfite reductase subunit C [Aeromonas veronii B565] Length = 336 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + E CI C CV+ C VDC +CI CG C CP A Sbjct: 174 HFNAERCIGCG--ACVKACNHHAVDCLAIKHGKAVKEESKCIGCGECVLACPTLA--WQR 229 Query: 60 EPGLELWLKINSEYATQWP 78 +P +K+ + + P Sbjct: 230 DPKQLYMVKLGGRTSKKTP 248 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 8/41 (19%) Query: 18 VEVCPVDC--------FYEGENFLAIHPDECIDCGVCEPEC 50 + CP DC G + + + CI CG C C Sbjct: 150 IAGCPNDCAKANMADFGILGIAKIHFNAERCIGCGACVKAC 190 >gi|307109800|gb|EFN58037.1| hypothetical protein CHLNCDRAFT_20716 [Chlorella variabilis] Length = 169 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 68 ERCIACKL--CEAICPAQAITIETEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 124 Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +TE + Sbjct: 68 ERCIACKLCEAICPAQAITIETEERED 94 Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 109 CIYCGF--CQEACPVDAIVEGPNFEY 132 >gi|255020680|ref|ZP_05292742.1| 4Fe-4S ferredoxin, iron-sulfur binding [Acidithiobacillus caldus ATCC 51756] gi|254969916|gb|EET27416.1| 4Fe-4S ferredoxin, iron-sulfur binding [Acidithiobacillus caldus ATCC 51756] Length = 83 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ + ENCI C C CP G I PD C +C C CPVD Sbjct: 1 MSLRIDENCINCDV--CEPECPNGAISMGPTIYVIDPDHCTECVGHYDTPQCREVCPVDC 58 Query: 55 IKPDTEPGL 63 I D E Sbjct: 59 IDLDPEHPE 67 >gi|254506838|ref|ZP_05118977.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus 16] gi|219550123|gb|EED27109.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio parahaemolyticus 16] Length = 230 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQ 145 >gi|212712379|ref|ZP_03320507.1| hypothetical protein PROVALCAL_03467 [Providencia alcalifaciens DSM 30120] gi|212685125|gb|EEB44653.1| hypothetical protein PROVALCAL_03467 [Providencia alcalifaciens DSM 30120] Length = 205 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ +C C + CVE CP + E+ L + C+ C CE CP A + D Sbjct: 59 SYYLSISCNHCSNPTCVEGCPTGAMHKRAEDGLVVVDQSICVGCRYCELRCPYGAPQFDE 118 Query: 60 EPGL 63 + L Sbjct: 119 KKKL 122 >gi|212692633|ref|ZP_03300761.1| hypothetical protein BACDOR_02130 [Bacteroides dorei DSM 17855] gi|237709058|ref|ZP_04539539.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724459|ref|ZP_04554940.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752581|ref|ZP_06088150.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212664918|gb|EEB25490.1| hypothetical protein BACDOR_02130 [Bacteroides dorei DSM 17855] gi|229437328|gb|EEO47405.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229456754|gb|EEO62475.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263235767|gb|EEZ21262.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 259 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V TE C C +C+EVCP EG+ I +CI C C ECP A DT Sbjct: 185 VCTEECFACG--ECIEVCPTHAIALSDEGKIETEI--TKCIKCCACVKECPNGARVFDTP 240 >gi|150003844|ref|YP_001298588.1| putative ferredoxin [Bacteroides vulgatus ATCC 8482] gi|254880931|ref|ZP_05253641.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319639939|ref|ZP_07994666.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_40A] gi|149932268|gb|ABR38966.1| putative ferredoxin [Bacteroides vulgatus ATCC 8482] gi|254833724|gb|EET14033.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317388217|gb|EFV69069.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_40A] Length = 259 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V TE C C +C+EVCP EG+ I +CI C C ECP A DT Sbjct: 185 VCTEECFACG--ECIEVCPTHAIALSDEGKIETEI--TKCIKCCACVKECPNGARVFDTP 240 >gi|126465150|ref|YP_001040259.1| dihydroorotate dehydrogenase family protein [Staphylothermus marinus F1] gi|126013973|gb|ABN69351.1| dihydroorotate dehydrogenase family protein [Staphylothermus marinus F1] Length = 406 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CI C C +VC + EG+ ++ D C CG+C CP AI + E Sbjct: 350 CIGCGF--CEQVCDYNAVKVVPNEEGKRIAQVNYDLCYGCGLCTSVCPTRAIHFEEELD 406 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 + P +CI CG CE C +A+K + ++N + Sbjct: 344 VVDPKKCIGCGFCEQVCDYNAVKVVPNEEGKRIAQVNYDL 383 >gi|49474185|ref|YP_032227.1| NADH dehydrogenase subunit I [Bartonella quintana str. Toulouse] gi|81696041|sp|Q6FZY3|NUOI_BARQU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|49239689|emb|CAF26064.1| NADH dehydrogenase I, I subunit [Bartonella quintana str. Toulouse] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPV+AI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRGNDGTRRTVRYDIDMVKCIYCGFCQEACPVEAI 118 >gi|325283907|ref|YP_004256448.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] gi|324315716|gb|ADY26831.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Deinococcus proteolyticus MRP] Length = 335 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 17 CVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C CP + G + I PD C CG+C CP A++ D L Sbjct: 36 CARACPHEAVILGPLGASVQIDPDRCTGCGLCVQACPSGALEYDLTGPL 84 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 7/55 (12%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECPVDA 54 V E C+ C C VCP + + L + C C C CP A Sbjct: 259 VDEKCMDC--PVCSNVCPTEAITRTHDAAGTLHLTLDLSACTGCMACVDSCPPQA 311 >gi|313157089|gb|EFR56519.1| ferredoxin [Alistipes sp. HGB5] Length = 361 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C +VC D N I P +C C C ECP AI+ Sbjct: 221 CIGCG--KCQKVCAFDAITIANNLAYIDPQKCKLCRKCVNECPTGAIR 266 Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%) Query: 13 KHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 DCV C D + PD+C CG C CP Sbjct: 144 GFGDCVVSCAFDAIRMNPETGLPEVDPDKCTACGACVKACP 184 >gi|238749713|ref|ZP_04611218.1| Protein nrfC [Yersinia rohdei ATCC 43380] gi|238712368|gb|EEQ04581.1| Protein nrfC [Yersinia rohdei ATCC 43380] Length = 212 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPV 52 +C C CV+VCP Y + ++PD C+ C C CP Sbjct: 80 SCQHCDRAPCVDVCPTGASYRDKATGIVDVNPDLCVGCQYCIAACPY 126 >gi|298530409|ref|ZP_07017811.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509783|gb|EFI33687.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 241 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C++ CV CP ++ E + H P++CI C C CP I W Sbjct: 58 CNHCENAPCVRGCPTRALHKVEGGITAHDPNKCIGCRYCLVNCPYGVINYTWNKPHREWE 117 Query: 68 KINS 71 ++ Sbjct: 118 NDDA 121 >gi|167646403|ref|YP_001684066.1| cytochrome c oxidase accessory protein CcoG [Caulobacter sp. K31] gi|167348833|gb|ABZ71568.1| cytochrome c oxidase accessory protein CcoG [Caulobacter sp. K31] Length = 501 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 18/65 (27%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKP 57 +CI C CV VCP+ +G ECI+CG+C C P I Sbjct: 283 DCIDC--HQCVVVCPMGIDIRDGSQM------ECINCGLCVDACDDILGRLGRPTGLIAY 334 Query: 58 DTEPG 62 DT+ Sbjct: 335 DTDAA 339 >gi|158301718|ref|XP_321378.4| AGAP001711-PA [Anopheles gambiae str. PEST] gi|157012608|gb|EAA00878.4| AGAP001711-PA [Anopheles gambiae str. PEST] Length = 214 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 113 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 169 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 113 ERCIACKLCEAICPAQAITIEAEERAD 139 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 154 CIYCGF--CQEACPVDAIVEGPNF 175 >gi|126640817|ref|YP_001083801.1| NADH dehydrogenase subunit I [Acinetobacter baumannii ATCC 17978] gi|213156543|ref|YP_002318204.1| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii AB0057] gi|215484512|ref|YP_002326747.1| NADH-quinone oxidoreductase subunit 9 [Acinetobacter baumannii AB307-0294] gi|213055703|gb|ACJ40605.1| NADH dehydrogenase I chain I 2Fe-2S ferredoxin-related [Acinetobacter baumannii AB0057] gi|213988464|gb|ACJ58763.1| NADH-quinone oxidoreductase subunit 9 [Acinetobacter baumannii AB307-0294] gi|322506935|gb|ADX02389.1| nuoI [Acinetobacter baumannii 1656-2] gi|323516802|gb|ADX91183.1| NADH dehydrogenase subunit I [Acinetobacter baumannii TCDC-AB0715] Length = 164 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 12/71 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 42 ERCVACNL--CAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 99 Query: 57 PDTEPGLELWL 67 + L ++ Sbjct: 100 LTPDFELGEYV 110 >gi|88601919|ref|YP_502097.1| 4Fe-4S ferredoxin, iron-sulfur binding [Methanospirillum hungatei JF-1] gi|88187381|gb|ABD40378.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Methanospirillum hungatei JF-1] Length = 425 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 20/81 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 YV +C C CVEVCPV+ + N + + CIDCG Sbjct: 98 YVRAADCTGCGD--CVEVCPVEVYNRFDAGIGVRKAIYKAHPQVVPNVVIRDKEHCIDCG 155 Query: 45 VCEPECPVDAIKPDTEPGLEL 65 +C C A+ D+E E Sbjct: 156 LCYDICGKQAVLRDSEDAEEE 176 >gi|307266841|ref|ZP_07548363.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306918129|gb|EFN48381.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 577 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C C+ + CP + + +I PD+C C VC CP DAI Sbjct: 528 DKCKKCGL--CLRIGCP--AISKKDGIFSIDPDQCTGCTVCMQVCPFDAI 573 >gi|293609051|ref|ZP_06691354.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829624|gb|EFF87986.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 87 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE IHPD C +C C+ CPVD Sbjct: 1 MSLYITDECINCDV--CEPVCPNEAIFMGEVIYEIHPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTKK 84 I P ++ E ++ + +K Sbjct: 59 I-----PKDPQHVETEDELFDKYKKLIAQK 83 >gi|256830313|ref|YP_003159041.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579489|gb|ACU90625.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 399 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFL-----AIHPDECIDCGVCEPECPV 52 ++ C C+ C +CP C ++ I D C+ C +CE CPV Sbjct: 9 SDYCTGCE--ACRNICPEQCITMVADYAGFLRPVIDADRCVGCLLCEKSCPV 58 >gi|219842412|gb|ACL37997.1| NADH dehydrogenase [Ochlerotatus taeniorhynchus] Length = 216 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 115 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 171 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 115 ERCIACKLCEAICPAQAITIEAEERAD 141 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 156 CIYCGF--CQEACPVDAIVEGPNF 177 >gi|146312467|ref|YP_001177541.1| NADH dehydrogenase subunit I [Enterobacter sp. 638] gi|145319343|gb|ABP61490.1| NADH dehydrogenase subunit I [Enterobacter sp. 638] Length = 180 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEY 125 >gi|113866398|ref|YP_724887.1| ferredoxin [Ralstonia eutropha H16] gi|113525174|emb|CAJ91519.1| Ferredoxin [Ralstonia eutropha H16] Length = 86 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + G I P++C +C C+ CPV Sbjct: 1 MALMITDDCINCDV--CEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVAC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|118475180|ref|YP_891369.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. fetus 82-40] gi|261886061|ref|ZP_06010100.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. venerealis str. Azul-94] gi|156633515|sp|A0RMD6|NUOI_CAMFF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|118414406|gb|ABK82826.1| NADH-ubiquinone oxidoreductase subunit 8 [Campylobacter fetus subsp. fetus 82-40] Length = 165 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 13/62 (20%) Query: 9 CILCKHTDCVEVCPVDCFY------EG-----ENFLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C C CP +C + EG + I EC+ CG+C CP DAI+ Sbjct: 78 CVACD--MCATACPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRM 135 Query: 58 DT 59 DT Sbjct: 136 DT 137 >gi|110801221|ref|YP_695581.1| nitroreductase family protein [Clostridium perfringens ATCC 13124] gi|110675868|gb|ABG84855.1| nitroreductase family protein [Clostridium perfringens ATCC 13124] Length = 272 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V T CI C T C++ C V + I + C++CG C CP +A+ D++ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMLDGKAHIKNESCMECGHCIAICPKEAV-SDSD 57 Query: 61 PGLELWLKINSEYATQ 76 + + N + Sbjct: 58 YDMSKIQEYNKDSFDI 73 >gi|94264660|ref|ZP_01288442.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93454891|gb|EAT05135.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 189 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV+VCP + L I CI C C CP DA Sbjct: 68 CQHCQNAPCVKVCPTTASRYTPDGLVAIDYKRCIVCAACILACPYDA 114 >gi|17546773|ref|NP_520175.1| NADH dehydrogenase subunit I [Ralstonia solanacearum GMI1000] gi|83746305|ref|ZP_00943358.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] gi|187929285|ref|YP_001899772.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12J] gi|207742743|ref|YP_002259135.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] gi|241663476|ref|YP_002981836.1| NADH dehydrogenase subunit I [Ralstonia pickettii 12D] gi|309781860|ref|ZP_07676593.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] gi|81504319|sp|Q8XXQ9|NUOI_RALSO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|17429073|emb|CAD15761.1| probable nadh dehydrogenaseI(chainI oxidoreductase protein [Ralstonia solanacearum GMI1000] gi|83727055|gb|EAP74180.1| NADH-quinone oxidoreductase chain I [Ralstonia solanacearum UW551] gi|187726175|gb|ACD27340.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12J] gi|206594137|emb|CAQ61064.1| nadh dehydrogenaseI(chainI protein [Ralstonia solanacearum IPO1609] gi|240865503|gb|ACS63164.1| NADH-quinone oxidoreductase, chain I [Ralstonia pickettii 12D] gi|299066341|emb|CBJ37525.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CMR15] gi|308919501|gb|EFP65165.1| NADH dehydrogenase (ubiquinone), I subunit [Ralstonia sp. 5_7_47FAA] Length = 163 Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 62 ERCIACKLCEAVCPALAITIESDQRDD 88 >gi|325109803|ref|YP_004270871.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces brasiliensis DSM 5305] gi|324970071|gb|ADY60849.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces brasiliensis DSM 5305] Length = 558 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKPDTEPG 62 VT C C + C+ CP + + + + H D+C C C CP K + + G Sbjct: 117 VTSACHHCVNPACMNACPTNAYEKDPITGIVKHLDDQCFGCQYCTLACPYGVPKYNADKG 176 >gi|307353436|ref|YP_003894487.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156669|gb|ADN36049.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanoplanus petrolearius DSM 11571] Length = 57 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V + C C+ CV+VCP + + + D C+DC C ECP +AI + Sbjct: 3 AVVDADKCTGCE--TCVDVCPSEAINMEDGIAVVDADACVDCESCVDECPAEAIHME 57 >gi|256840652|ref|ZP_05546160.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737924|gb|EEU51250.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 301 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C CV VCP D F + GE + + CI CG C CP ++ P Sbjct: 23 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSVSHSEFPPE 80 Query: 64 E 64 + Sbjct: 81 K 81 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L I + CI CG C CP D I G Sbjct: 18 LNIDQESCIKCGKCVRVCPSD-IFTQERAGE 47 >gi|240102122|ref|YP_002958430.1| formate hydrogenlyase II subunit B (Mhy2B) [Thermococcus gammatolerans EJ3] gi|239909675|gb|ACS32566.1| formate hydrogenlyase II subunit B (Mhy2B) [Thermococcus gammatolerans EJ3] Length = 166 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDT 59 NC C+ CVEVCP + Y E+ + P +CI C +C CP + D Sbjct: 47 NCRHCEKAPCVEVCPTNALYRDEDGAVLLAPQKCIGCLMCGIVCPFGIPELDV 99 >gi|260588480|ref|ZP_05854393.1| protein HymB [Blautia hansenii DSM 20583] gi|331082243|ref|ZP_08331370.1| hypothetical protein HMPREF0992_00294 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540955|gb|EEX21524.1| protein HymB [Blautia hansenii DSM 20583] gi|330403037|gb|EGG82602.1| hypothetical protein HMPREF0992_00294 [Lachnospiraceae bacterium 6_1_63FAA] Length = 624 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 YV+ E C C C + CPV + I+P+ CI C C C DA+ + Sbjct: 568 YVINPEFCKGCG--KCAKNCPVGAITGVRKEAYHINPNLCIKCDSCRDNCAFDAVYVE 623 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 10/45 (22%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C +C + I+P+ C CG C CPV AI Sbjct: 556 KCAAKNCTAM----------RKYVINPEFCKGCGKCAKNCPVGAI 590 >gi|254455959|ref|ZP_05069388.1| NADH dehydrogenase i chain i [Candidatus Pelagibacter sp. HTCC7211] gi|207082961|gb|EDZ60387.1| NADH dehydrogenase i chain i [Candidatus Pelagibacter sp. HTCC7211] Length = 161 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+CE CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIESAAREDGSRKTTRYDIDMMKCIYCGLCEESCPVDAI 116 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 + CI C +CE CP AI ++ Sbjct: 60 ERCIACKLCEAVCPAQAITIES 81 >gi|160879121|ref|YP_001558089.1| nitroreductase [Clostridium phytofermentans ISDg] gi|160427787|gb|ABX41350.1| nitroreductase [Clostridium phytofermentans ISDg] Length = 273 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V E CI C C+ CP C +N + CI+CG C CP A+ + + Sbjct: 1 MMIVNKEKCIACGL--CINDCPARCITWKDNKAFVVNKICIECGHCIAICPKFAVSTEED 58 >gi|90022045|ref|YP_527872.1| NADH:ubiquinone oxidoreductase subunit RnfB [Saccharophagus degradans 2-40] gi|89951645|gb|ABD81660.1| electron transport complex, RnfABCDGE type, B subunit [Saccharophagus degradans 2-40] Length = 206 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 115 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCI 167 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 14/28 (50%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAI 55 E I DECI C C CPVDAI Sbjct: 110 EVPKVAYIREDECIGCTKCIQACPVDAI 137 >gi|70606132|ref|YP_255002.1| ferredoxin-like protein [Sulfolobus acidocaldarius DSM 639] gi|68566780|gb|AAY79709.1| ferredoxin-like protein [Sulfolobus acidocaldarius DSM 639] Length = 89 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDTEPG 62 V T+ C+ CK CV CP + E+ I H + C++CG CP AI + G Sbjct: 23 VNTDICLTCKDKPCVASCPAGTYEPSEDGRIIVHYERCLECGGAIVICPFGAITFNFPEG 82 >gi|76666794|emb|CAJ31172.1| Hdr-like menaquinol-oxidizing enzyme, subunit A (HmeA) [uncultured sulfate-reducing bacterium] Length = 257 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 9 CILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C + CV VCP EG+ + + CI C C CP + + Sbjct: 118 CNHCDNPPCVRVCPTQATWKREGDGIVMMDWHRCIGCRYCVAACPYGSRSFNWRDPRPHI 177 Query: 67 LKINSEYATQWPNITTKK 84 I+ +Y T+ + K Sbjct: 178 ADIDDDYPTRNRGVVEKC 195 >gi|45359260|ref|NP_988817.1| heterodisulfide reductase subunit A [Methanococcus maripaludis S2] gi|172046136|sp|Q6LWL2|HDRA_METMP RecName: Full=CoB--CoM heterodisulfide reductase iron-sulfur subunit A gi|45048135|emb|CAF31253.1| heterodisulfide reductase, subunit A [Methanococcus maripaludis S2] Length = 658 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C CP++ E G I + CIDCG Sbjct: 240 YVDEDTCTGCG--ACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKEHCIDCG 297 Query: 45 VCEPECPVDAIKPDTEPGL 63 +C C +A++ D +P Sbjct: 298 LCAKVCCAEAVRYDQKPQE 316 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPD--ECIDCGVCEPECPVDA 54 V E C CK C +CP + E + L D C CG C CP A Sbjct: 577 ATVNEEVCGGCKV--CALMCPYNAITYEEKDGHLVAITDDVACKGCGACAAACPSGA 631 >gi|121603805|ref|YP_981134.1| 4Fe-4S ferredoxin [Polaromonas naphthalenivorans CJ2] gi|120592774|gb|ABM36213.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polaromonas naphthalenivorans CJ2] Length = 89 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + + G I P++C +C C CPV Sbjct: 1 MALLITDDCINCDV--CEPECPNEAIFLGAEIYEIDPNKCTECVGHFDEPQCVQVCPVAC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPVD 62 >gi|114319976|ref|YP_741659.1| electron transport complex, RnfABCDGE type, B subunit [Alkalilimnicola ehrlichii MLHE-1] gi|123127335|sp|Q0AAG8|RNFB_ALHEH RecName: Full=Electron transport complex protein rnfB gi|114226370|gb|ABI56169.1| electron transport complex, RnfABCDGE type, B subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 186 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP---DTEPGLE 64 CI C T C++ CPVD + + EC CG+C CPVD I D + Sbjct: 114 CIGC--TRCIQACPVDAILGAAKQMHTVLKGECTGCGLCVDPCPVDCIHMVPVDLDLAEW 171 Query: 65 LW 66 W Sbjct: 172 HW 173 >gi|310779383|ref|YP_003967716.1| Cobyrinic acid ac-diamide synthase [Ilyobacter polytropus DSM 2926] gi|309748706|gb|ADO83368.1| Cobyrinic acid ac-diamide synthase [Ilyobacter polytropus DSM 2926] Length = 285 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C LC C + C + ++ + I + C +CG CE CP +AI+ + +++ Sbjct: 64 EKCNLCG--KCGDFCRYNAILPAKDKVLIFKEICHNCGGCEIVCPTNAIQYEKREIGKIY 121 >gi|262383329|ref|ZP_06076465.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294227|gb|EEY82159.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 308 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + CI C C +CP ++F + C+ C CE CP +AIK Sbjct: 58 IKNKCIGCG--RCEAICPRGNISIQDHFPVFNRQACVACKACERICPQNAIKF 108 >gi|206889435|ref|YP_002249380.1| electron transfer flavoprotein alpha-subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206889764|ref|YP_002249430.1| electron transfer flavoprotein alpha-subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741373|gb|ACI20430.1| electron transfer flavoprotein alpha-subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741702|gb|ACI20759.1| electron transfer flavoprotein alpha-subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 393 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C CV VCP E+ I + C CG C C AI + +E Sbjct: 8 EKCTGC--ATCVNVCPFGAIIIKEDKAFIT-ESCTLCGACVESCSEGAIIDARDKEVEK 63 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I+ ++C C C CP AI Sbjct: 5 INIEKCTGCATCVNVCPFGAI 25 >gi|150402634|ref|YP_001329928.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033664|gb|ABR65777.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 252 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C C E+CPV + + + +CI CG CE CPV AI+ Sbjct: 199 DTCINC--MVCSEICPVGAIVYEDGSMKLDDKKCIFCGKCEKNCPVSAIE 246 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 YV T C+ C+ C EVCPV E +N I P++C+ C +C CPV AI Sbjct: 42 YVETNKCVRCEL--CYEVCPVQAITEPSVKNPAEIIPEKCVKCEICAKTCPVGAI 94 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 10/61 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C+ C T C +VCP EN ++++ D CI+C VC CPV AI + Sbjct: 162 DLCMGC--TACEKVCPKSSIKVENEMGEIPAENVISLNNDTCINCMVCSEICPVGAIVYE 219 Query: 59 T 59 Sbjct: 220 D 220 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C C CP E N + I+ D C+ C CE CP +IK + E G Sbjct: 132 ESCIKCG--ICERFCPTSAIKVEKRNSIDINLDLCMGCTACEKVCPKSSIKVENEMGE 187 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 28/81 (34%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFL------------------------AIHP 37 ++ E C+ C+ C + CPV EG L + Sbjct: 74 IIPEKCVKCE--ICAKTCPVGAINVLEGRAELKNDDVIYELKEIDVTHRKIRLKKHELDE 131 Query: 38 DECIDCGVCEPECPVDAIKPD 58 + CI CG+CE CP AIK + Sbjct: 132 ESCIKCGICERFCPTSAIKVE 152 >gi|147919778|ref|YP_686476.1| 2(4Fe-4S) ferredoxin-domain-containing protein [uncultured methanogenic archaeon RC-I] gi|110621872|emb|CAJ37150.1| 2(4Fe-4S) ferredoxin-domain protein [uncultured methanogenic archaeon RC-I] Length = 276 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 ++C C T+CV VCP + I C CG CE C IK Sbjct: 200 DDCTRC--TNCVGVCPFKAIRLDDIVEGPVIDERRCKGCGRCEVVCRPGVIK 249 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 D+C C C CP AI+ D Sbjct: 200 DDCTRCTNCVGVCPFKAIRLDD 221 >gi|56416854|ref|YP_153928.1| NADH dehydrogenase subunit I [Anaplasma marginale str. St. Maries] gi|222475219|ref|YP_002563635.1| NADH dehydrogenase I chain I (nuoI) [Anaplasma marginale str. Florida] gi|81359048|sp|Q5PAK7|NUOI_ANAMM RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|56388086|gb|AAV86673.1| NADH dehydrogenase [Anaplasma marginale str. St. Maries] gi|222419356|gb|ACM49379.1| NADH dehydrogenase I chain I (nuoI) [Anaplasma marginale str. Florida] Length = 160 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 59 ERCIACKL--CEAICPAQAITIEAAERGDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 115 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 100 CIYCGF--CQEACPVDAIVEGPNFEY 123 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 + CI C +CE CP AI + Sbjct: 59 ERCIACKLCEAICPAQAITIE 79 >gi|18313282|ref|NP_559949.1| putative ATPase RIL [Pyrobaculum aerophilum str. IM2] gi|18160804|gb|AAL64131.1| RNase L inhibitor homolog [Pyrobaculum aerophilum str. IM2] Length = 590 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 7 ENCI--LCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++C C H +CV+ CPV+ E I CI CG+C +CP +AI Sbjct: 10 DSCQPKKCGH-ECVKYCPVNKSGKVVWIDEQLKKAVISEALCIGCGICVHKCPFEAITIV 68 Query: 59 TEPGL 63 P Sbjct: 69 NLPDE 73 >gi|161830697|ref|YP_001597284.1| NADH dehydrogenase subunit I [Coxiella burnetii RSA 331] gi|81722524|sp|Q83BR3|NUOI_COXBU RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|189030927|sp|A9KBL3|NUOI_COXBN RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|189030928|sp|A9N8W4|NUOI_COXBR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|161762564|gb|ABX78206.1| NADH dehydrogenase (ubiquinone), I subunit [Coxiella burnetii RSA 331] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP G I +CI+CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPACAITIEAGPREADGSRRTTLYDIDAFKCINCGFCEEACPVDAI 118 Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 61 ERCIACKLCEAVCPACAITIEAGP 84 >gi|45359255|ref|NP_988812.1| polyferredoxin, associated with F420-non-reducing hydrogenase [Methanococcus maripaludis S2] gi|45048130|emb|CAF31248.1| polyferredoxin, associated with F420-non-reducing hydrogenase [Methanococcus maripaludis S2] Length = 383 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT++C+ C CV CPVD E+ I D+CI C VC CP +AI Sbjct: 116 VTKDCVACGV--CVPECPVDAISI-EDIAVIDTDKCIYCTVCSQTCPWNAIF 164 Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C+ CVE CP Y GE P+ C CG+C CPV+ I + E Sbjct: 182 VNEEECIGCE--KCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLEVE 237 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 12/69 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYE----------GENFLAIHPDECIDCGVCEPECPVDAIK 56 E C C CVE CPV+ + L ++C CG C +CP AIK Sbjct: 215 EACPACGL--CVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIK 272 Query: 57 PDTEPGLEL 65 GLEL Sbjct: 273 VVNPKGLEL 281 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 CI C C CP E + L + +C G C+ CPV Sbjct: 22 CIQC--FSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVG 64 >gi|154244612|ref|YP_001415570.1| formate dehydrogenase, beta subunit [Xanthobacter autotrophicus Py2] gi|154158697|gb|ABS65913.1| formate dehydrogenase, beta subunit [Xanthobacter autotrophicus Py2] Length = 323 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + C+ C C++ CP + N + D+CI CG C CP + Sbjct: 110 DGCMHCADPGCLKACPAPGAIVQYSNGIVDFDHDKCIGCGYCVKGCPFN 158 >gi|99081333|ref|YP_613487.1| 4Fe-4S ferredoxin, iron-sulfur binding [Ruegeria sp. TM1040] gi|99037613|gb|ABF64225.1| 4Fe-4S ferredoxin iron-sulfur binding [Ruegeria sp. TM1040] Length = 247 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 3 YV-VTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECP 51 YV +T+ C LC+H CV CP D + G+ N L I C CG+C CP Sbjct: 182 YVSLTDGCTLCQH--CVWSCPTDAMHLGDTGNTLEIRDQACTGCGLCASACP 231 >gi|284042623|ref|YP_003392963.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] gi|283946844|gb|ADB49588.1| NADH-quinone oxidoreductase, chain I [Conexibacter woesei DSM 14684] Length = 177 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------------EGENF---LAIHPDECIDCGVCEPEC 50 E C+ C + C CP DC GE + I+ CI CG CE C Sbjct: 77 EKCVGC--SLCAAACPADCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVAC 134 Query: 51 PVDAIKPDTEPGLELW 66 P DAI + + + Sbjct: 135 PFDAITMGHDYEMSDY 150 >gi|323525306|ref|YP_004227459.1| RnfABCDGE type electron transport complex subunit B [Burkholderia sp. CCGE1001] gi|323382308|gb|ADX54399.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. CCGE1001] Length = 302 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD----TEPGL 63 CI C T C++ CPVD + + + C C +C P CPVD I G Sbjct: 89 CIGC--TLCMQACPVDAIVGAPKHMHTVVAELCTGCDLCVPPCPVDCISMPPVTGEATGW 146 Query: 64 ELWLKINSEYA 74 + W + +E A Sbjct: 147 DAWSEAQAEAA 157 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 VIEEQICIGCTLCMQACPVDAI 104 >gi|269958730|ref|YP_003328517.1| NADH dehydrogenase subunit I [Anaplasma centrale str. Israel] gi|269848559|gb|ACZ49203.1| NADH dehydrogenase subunit I [Anaplasma centrale str. Israel] Length = 160 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 59 ERCIACKL--CEAICPAQAITIEAEERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 115 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 100 CIYCGF--CQEACPVDAIVEGPNFEY 123 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 59 ERCIACKLCEAICPAQAITIEAEERDD 85 >gi|261403596|ref|YP_003247820.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261370589|gb|ACX73338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 658 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C VCP++ E G I + CI CG Sbjct: 239 YVDEDICTGCG--ACAAVCPIEVPNEFDLGLGTRKAIYVPFAQAIPLVYTIDMEHCIRCG 296 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C AI+ D +P Sbjct: 297 LCEKACGPGAIRYDQKPEE 315 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 6/55 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECIDCGVCEPECPVDA 54 V + C C C ++CP + E + L ++ C CG C CP A Sbjct: 578 VDEDVCGGC--QVCAKMCPYNAITYVEKDGHLIAQVNDVACKGCGACAGACPSGA 630 >gi|261402830|ref|YP_003247054.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261369823|gb|ACX72572.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 654 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 Y+ C C C EVCP++ E + I + CIDCG Sbjct: 240 YIDETKCTGCGQ--CAEVCPIEVPNEFDMGLGMRKAIYKPFPQAVPSKYTIDKEHCIDCG 297 Query: 45 VCEPECPVDAIKPDTEPGL 63 +C C +AI D +P Sbjct: 298 LCAKVCGPNAIDYDQKPEF 316 Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIH--PDECIDCGVCEPECPVDAIKP 57 V E C C CV+ CP E + L C CG C CP A++ Sbjct: 577 ATVNKEICGGCGV--CVKQCPYGAPRLIEEDGKLVCDVIAALCKGCGTCVAGCPSGALEQ 634 Query: 58 DTEPGLELWLKI 69 + ++L+ +I Sbjct: 635 NHFKTIQLYKQI 646 >gi|240948591|ref|ZP_04752964.1| electron transport complex protein RnfB [Actinobacillus minor NM305] gi|240297099|gb|EER47670.1| electron transport complex protein RnfB [Actinobacillus minor NM305] Length = 203 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + D C C +C CP + I+ Sbjct: 109 AFIHEDMCIGC--TKCIQACPVDAIIGTNKAMHTVIADLCTGCELCIAPCPTNCIE 162 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%) Query: 22 PVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAI 55 P E IH D CI C C CPVDAI Sbjct: 96 PTMEGEEAPETKVAFIHEDMCIGCTKCIQACPVDAI 131 >gi|225028913|ref|ZP_03718105.1| hypothetical protein EUBHAL_03202 [Eubacterium hallii DSM 3353] gi|224953752|gb|EEG34961.1| hypothetical protein EUBHAL_03202 [Eubacterium hallii DSM 3353] Length = 287 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + CI C CV+ C + + ++I +C CG C CPVDA D +PG Sbjct: 161 VEDKCIQCGV--CVKACRNEAITLEDGKISIDTGKCNYCGRCVKSCPVDA--YDAQPG 214 >gi|167718713|ref|ZP_02401949.1| ferredoxin [Burkholderia pseudomallei DM98] gi|167814883|ref|ZP_02446563.1| ferredoxin [Burkholderia pseudomallei 91] Length = 165 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|161521067|ref|YP_001584494.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189352755|ref|YP_001948382.1| formate-dependent nitrite reductase Fe-S protein [Burkholderia multivorans ATCC 17616] gi|160345117|gb|ABX18202.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Burkholderia multivorans ATCC 17616] gi|189336777|dbj|BAG45846.1| formate-dependent nitrite reductase Fe-S protein [Burkholderia multivorans ATCC 17616] Length = 247 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|167893415|ref|ZP_02480817.1| ferredoxin [Burkholderia pseudomallei 7894] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 80 AFIDEQLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 >gi|307301099|ref|ZP_07580868.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] gi|307317833|ref|ZP_07597271.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306896595|gb|EFN27343.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306904054|gb|EFN34640.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|305662719|ref|YP_003859007.1| flavoprotein [Ignisphaera aggregans DSM 17230] gi|304377288|gb|ADM27127.1| flavoprotein [Ignisphaera aggregans DSM 17230] Length = 245 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 T NC C D +CPV+ E F I +CI C C CP A+K Sbjct: 152 TYNCTKCLAKD---ICPVNAITIIEGFPRIDLSKCIGCEKCMYACPFKAVK 199 >gi|300703650|ref|YP_003745252.1| NADH-quinone oxidoreductase subunit i [Ralstonia solanacearum CFBP2957] gi|299071313|emb|CBJ42631.1| NADH-quinone oxidoreductase subunit I [Ralstonia solanacearum CFBP2957] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIESDQRDDGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 62 ERCIACKLCEAVCPALAITIESDQRDD 88 >gi|221196768|ref|ZP_03569815.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD2M] gi|221203437|ref|ZP_03576456.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD2] gi|221177371|gb|EEE09799.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD2] gi|221183322|gb|EEE15722.1| 4Fe-4S ferredoxin [Burkholderia multivorans CGD2M] Length = 247 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D Sbjct: 72 SCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDE 125 >gi|210620573|ref|ZP_03292121.1| hypothetical protein CLOHIR_00064 [Clostridium hiranonis DSM 13275] gi|210155287|gb|EEA86293.1| hypothetical protein CLOHIR_00064 [Clostridium hiranonis DSM 13275] Length = 298 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 11 LCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C + CV CP +N + I+ D+C+ C C CP A+ + Sbjct: 54 KCSYCLSCVVTCPNGAITHEDNKIIINEDKCVGCLTCVNSCPNRALSYE 102 >gi|168209486|ref|ZP_02635111.1| nitroreductase family protein [Clostridium perfringens B str. ATCC 3626] gi|170712325|gb|EDT24507.1| nitroreductase family protein [Clostridium perfringens B str. ATCC 3626] Length = 272 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V T CI C T C++ C V + I + C++CG C CP +A+ D++ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMLDGKAHIKNESCMECGHCIAICPKEAV-SDSD 57 Query: 61 PGLELWLKINSEYATQ 76 + + N + Sbjct: 58 YDMSKIQEYNKDSFDI 73 >gi|218780444|ref|YP_002431762.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761828|gb|ACL04294.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 281 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVE-VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C+ C CV C ++ + I+ C CG C CP +AI Sbjct: 199 VNQEECVGCG--TCVSKACILEAISLVDGKAVINQANCRGCGRCAEACPTNAI 249 >gi|113867078|ref|YP_725567.1| NADH dehydrogenase subunit I [Ralstonia eutropha H16] gi|194289167|ref|YP_002005074.1| NADH dehydrogenase subunit i [Cupriavidus taiwanensis LMG 19424] gi|123033156|sp|Q0KCS2|NUOI_RALEH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|226737389|sp|B3R3X5|NUOI_CUPTR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|113525854|emb|CAJ92199.1| NADH dehydrogenase chain I [Ralstonia eutropha H16] gi|193223002|emb|CAQ69007.1| NADH:ubiquinone oxidoreductase complex I, chain I [Cupriavidus taiwanensis LMG 19424] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIESDARADGTRRTTRYDIDLTKCIFCGFCEEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI +++ + Sbjct: 62 ERCIACKLCEAVCPALAITIESDARAD 88 >gi|158319108|ref|YP_001511615.1| thiamine pyrophosphate binding domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158139307|gb|ABW17619.1| thiamine pyrophosphate protein domain protein TPP-binding [Alkaliphilus oremlandii OhILAs] Length = 593 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK CV CP F +I+ ++C+ C VC CPV AI Sbjct: 541 EVCIGCK--ACVRTGCPAISFDTEHKKSSINIEQCVGCSVCYQVCPVKAI 588 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Query: 30 ENFLAIHPDECIDCGVCEPE-CPVDAIKPDTEP 61 ++ +++ + CI C C CP AI DTE Sbjct: 533 QDRYSVNHEVCIGCKACVRTGCP--AISFDTEH 563 >gi|56707710|ref|YP_169606.1| ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89256633|ref|YP_513995.1| ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110670181|ref|YP_666738.1| ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115315052|ref|YP_763775.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118497350|ref|YP_898400.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. novicida U112] gi|134302320|ref|YP_001122289.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156502770|ref|YP_001428835.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167011029|ref|ZP_02275960.1| ferredoxin [Francisella tularensis subsp. holarctica FSC200] gi|187931913|ref|YP_001891898.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. mediasiatica FSC147] gi|195536038|ref|ZP_03079045.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. novicida FTE] gi|224456779|ref|ZP_03665252.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|254367947|ref|ZP_04983967.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|254369504|ref|ZP_04985515.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|254370216|ref|ZP_04986222.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|254372715|ref|ZP_04988204.1| hypothetical protein FTCG_00281 [Francisella tularensis subsp. novicida GA99-3549] gi|254374173|ref|ZP_04989655.1| 4Fe-4S ferredoxin [Francisella novicida GA99-3548] gi|254874522|ref|ZP_05247232.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|290953549|ref|ZP_06558170.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|295313153|ref|ZP_06803835.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. holarctica URFT1] gi|148685|gb|AAB00856.1| ferredoxin [Francisella tularensis] gi|54113949|gb|AAV29608.1| NT02FT0816 [synthetic construct] gi|56604202|emb|CAG45215.1| Ferredoxin [Francisella tularensis subsp. tularensis SCHU S4] gi|89144464|emb|CAJ79768.1| Ferredoxin [Francisella tularensis subsp. holarctica LVS] gi|110320514|emb|CAL08598.1| Ferredoxin [Francisella tularensis subsp. tularensis FSC198] gi|115129951|gb|ABI83138.1| ferredoxin [Francisella tularensis subsp. holarctica OSU18] gi|118423256|gb|ABK89646.1| 4Fe-4S ferredoxin [Francisella novicida U112] gi|134050097|gb|ABO47168.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253757|gb|EBA52851.1| ferredoxin [Francisella tularensis subsp. holarctica 257] gi|151568460|gb|EDN34114.1| ferredoxin [Francisella tularensis subsp. tularensis FSC033] gi|151570442|gb|EDN36096.1| hypothetical protein FTCG_00281 [Francisella novicida GA99-3549] gi|151571893|gb|EDN37547.1| 4Fe-4S ferredoxin [Francisella novicida GA99-3548] gi|156253373|gb|ABU61879.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122458|gb|EDO66593.1| ferredoxin [Francisella tularensis subsp. holarctica FSC022] gi|187712822|gb|ACD31119.1| 4Fe-4S ferredoxin [Francisella tularensis subsp. mediasiatica FSC147] gi|194372515|gb|EDX27226.1| 4Fe-4S binding domain protein [Francisella tularensis subsp. novicida FTE] gi|254840521|gb|EET18957.1| ferredoxin [Francisella tularensis subsp. tularensis MA00-2987] gi|282158877|gb|ADA78268.1| ferredoxin [Francisella tularensis subsp. tularensis NE061598] gi|328676838|gb|AEB27708.1| Ferredoxin [Francisella cf. novicida Fx1] Length = 81 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP + +GE + I P++C +C C CP+ Sbjct: 1 MALLITDECINCD--ICEPECPNEAISQGEEYYEIDPNKCTECVGHFEESQCTKVCPIRC 58 Query: 55 IKPD 58 I D Sbjct: 59 IIID 62 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C +CEPECP +AI E Sbjct: 7 DECINCDICEPECPNEAISQGEE 29 >gi|194334196|ref|YP_002016056.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194312014|gb|ACF46409.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Prosthecochloris aestuarii DSM 271] Length = 62 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +T+ C C C CPV+ G++ I C DC C CPVD Sbjct: 1 MAHRITDECTYC--AACEPECPVNAISAGDDTYIIDESVCTDCVGYYEEAACVAVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|329296025|ref|ZP_08253361.1| NADH dehydrogenase subunit I [Plautia stali symbiont] Length = 180 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMQDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + L + Sbjct: 116 LTPDFELGEF 125 >gi|320451341|ref|YP_004203437.1| polyferredoxin [Thermus scotoductus SA-01] gi|320151510|gb|ADW22888.1| polyferredoxin [Thermus scotoductus SA-01] Length = 313 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 5 VTENCILCKHTDCVEVCPVDCFY---EGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C LC C VCP + Y EGE + L + + C CG C CP I+ + Sbjct: 235 VEEGCTLC--PVCTNVCPTEAVYRVREGEEYVLRLKVEACTGCGACVESCPPQVIRLEEA 292 Query: 61 PGLELWLKINSEYATQWP 78 EL+ ++ E P Sbjct: 293 GKEELFQEL--ELYRGRP 308 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C +VCP + + C CG+C CP A++ E + Sbjct: 39 CYQVCPKGAVRLESFRVELDEVLCTGCGLCTGVCPGVALEYPLGGIQEALI 89 >gi|319942594|ref|ZP_08016903.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] gi|319803890|gb|EFW00812.1| 4Fe-4S ferredoxin [Sutterella wadsworthensis 3_1_45B] Length = 193 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 C C++ C+ VCP + P C+ CG C CP DA Sbjct: 67 CQQCENAPCITVCPFGANSHDPETGQVKTDPSRCVGCGYCVTACPYDA 114 >gi|312890388|ref|ZP_07749925.1| NADH dehydrogenase subunit I [Mucilaginibacter paludis DSM 18603] gi|311297158|gb|EFQ74290.1| NADH dehydrogenase subunit I [Mucilaginibacter paludis DSM 18603] Length = 165 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 19/78 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 72 ERCTACGL--CALSCPAEAITMIAAERQKGEEKLYREEKYAAVYEINMLRCIFCGLCEEA 129 Query: 50 CPVDAIKPDTEPGLELWL 67 CP +AI D + +L Sbjct: 130 CPKEAIYLDGDIVPSNYL 147 >gi|300087732|ref|YP_003758254.1| NADH dehydrogenase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527465|gb|ADJ25933.1| NADH dehydrogenase (quinone) [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 624 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCF-YEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 Y+V NC C + C++ CP D ++G+ + D+C CG C C ++A++ Sbjct: 569 YIVEANCNGC--SLCIKECPADAISFQGKKQPVKLDQDKCTKCGACYDICRLNAVE 622 Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 11/23 (47%) Query: 33 LAIHPDECIDCGVCEPECPVDAI 55 I C C +C ECP DAI Sbjct: 568 YYIVEANCNGCSLCIKECPADAI 590 >gi|289192883|ref|YP_003458824.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus sp. FS406-22] gi|288939333|gb|ADC70088.1| nitrite and sulphite reductase 4Fe-4S region [Methanocaldococcus sp. FS406-22] Length = 621 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V E C C C EVC V+ + + C+ CG C ECP DA Sbjct: 491 VNEEKCNGCG--RCAEVCKVEAIDVRGEISYTNYNVCVGCGKCIKECPNDA 539 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 8/46 (17%) Query: 18 VEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAI 55 + CP C G F A++ ++C CG C C V+AI Sbjct: 466 ISGCPNGCVRPQVHDIGIAGVKFPAVNEEKCNGCGRCAEVCKVEAI 511 >gi|261403708|ref|YP_003247932.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus vulcanius M7] gi|261370701|gb|ACX73450.1| archaeoflavoprotein, MJ0208 family [Methanocaldococcus vulcanius M7] Length = 235 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C CVE CP + F I +C+ CG C+ CP AI E + + K Sbjct: 150 CNCCL--KCVEACPNGAIIVRKRFPEIVLSKCLGCGRCKRVCPNGAIIEGKEIKMRVR-K 206 Query: 69 INSE 72 +++E Sbjct: 207 VDAE 210 >gi|291613546|ref|YP_003523703.1| NADH-quinone oxidoreductase, chain I [Sideroxydans lithotrophicus ES-1] gi|291583658|gb|ADE11316.1| NADH-quinone oxidoreductase, chain I [Sideroxydans lithotrophicus ES-1] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CPVDAI Sbjct: 61 ERCIGCKL--CEAVCPALAIKIEVAEREDGTRRTTRYDIDLVKCIFCGFCEESCPVDAI 117 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDT 59 + CI C +CE CP AIK + Sbjct: 61 ERCIGCKLCEAVCPALAIKIEV 82 >gi|227883743|ref|ZP_04001548.1| electron transport protein ysaA [Escherichia coli 83972] gi|300920461|ref|ZP_07136893.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|300971467|ref|ZP_07171470.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|301047069|ref|ZP_07194171.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|331659889|ref|ZP_08360827.1| putative electron transport protein YsaA [Escherichia coli TA206] gi|227839323|gb|EEJ49789.1| electron transport protein ysaA [Escherichia coli 83972] gi|281180618|dbj|BAI56948.1| putative electron transport protein [Escherichia coli SE15] gi|284923605|emb|CBG36702.1| putative electron-transport protein [Escherichia coli 042] gi|300301017|gb|EFJ57402.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|300411238|gb|EFJ94776.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|300412526|gb|EFJ95836.1| 4Fe-4S binding domain protein [Escherichia coli MS 115-1] gi|307555678|gb|ADN48453.1| putative electron transport protein YsaA [Escherichia coli ABU 83972] gi|315294101|gb|EFU53453.1| 4Fe-4S binding domain protein [Escherichia coli MS 153-1] gi|315300154|gb|EFU59392.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] gi|320193914|gb|EFW68547.1| Electron transport protein HydN [Escherichia coli WV_060327] gi|330909637|gb|EGH38151.1| electron transport protein HydN [Escherichia coli AA86] gi|331053104|gb|EGI25137.1| putative electron transport protein YsaA [Escherichia coli TA206] Length = 157 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|218130737|ref|ZP_03459541.1| hypothetical protein BACEGG_02328 [Bacteroides eggerthii DSM 20697] gi|217987081|gb|EEC53412.1| hypothetical protein BACEGG_02328 [Bacteroides eggerthii DSM 20697] Length = 427 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPV 52 C C C ++C D E F+ I D+CI+CG+C+ CP+ Sbjct: 14 CTGC--MACSDICRHDAIKIVERNCLPFVQIDADKCINCGLCQKACPI 59 >gi|197283980|ref|YP_002149852.1| oxidoreductase, Fe-S subunit [Proteus mirabilis HI4320] gi|194681467|emb|CAR40306.1| putative oxidoreductase, Fe-S subunit [Proteus mirabilis HI4320] Length = 223 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVD 53 +C C+ C+ VCP E + ++ ++CI C C CP Sbjct: 91 SCQQCEDAPCISVCPTGASWRDESNGIVRVNKEKCIGCSYCISACPYQ 138 >gi|320156811|ref|YP_004189190.1| NrfC protein [Vibrio vulnificus MO6-24/O] gi|319932123|gb|ADV86987.1| NrfC protein [Vibrio vulnificus MO6-24/O] Length = 228 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQ 145 >gi|20808295|ref|NP_623466.1| ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] gi|20516898|gb|AAM25070.1| Ferredoxin 2 [Thermoanaerobacter tengcongensis MB4] Length = 156 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E CI C +C+ CP + I P++C DCG C CPV AI Sbjct: 106 VDEEKCIGCG--ECLRFCPFKAIELKDGVAHIDPNKCRDCGRCIDVCPVGAI 155 >gi|320353466|ref|YP_004194805.1| CoB--CoM heterodisulfide reductase subunit A [Desulfobulbus propionicus DSM 2032] gi|320121968|gb|ADW17514.1| CoB--CoM heterodisulfide reductase subunit A [Desulfobulbus propionicus DSM 2032] Length = 807 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 ++ E C C C EVCP + + ++ C CG C EC DAI Sbjct: 593 IIAEKCKACG--KCAEVCPYGAITVDVKNKKPAVVNSAACAGCGTCSAECRFDAI 645 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I ++C CG C CP AI D + Sbjct: 593 IIAEKCKACGKCAEVCPYGAITVDVK 618 >gi|294340543|emb|CAZ88928.1| Putative Electron transport complex, RnfABCDGE type, B subunit (RnfB) [Thiomonas sp. 3As] Length = 210 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPD--TEPGLEL 65 CI C T C++ CPVD + + D C C +C P CPVD I+ + T+P L Sbjct: 88 CIGC--TLCIQACPVDAIAGVSKRMHTVIEDWCTGCALCLPPCPVDCIRMEALTDPALAT 145 Query: 66 WLKINS 71 N+ Sbjct: 146 RSGWNA 151 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 25 CFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C EG I P CI C +C CPVDAI Sbjct: 72 CGTEGPRERAVIDPALCIGCTLCIQACPVDAI 103 >gi|302501279|ref|XP_003012632.1| hypothetical protein ARB_01245 [Arthroderma benhamiae CBS 112371] gi|302665888|ref|XP_003024550.1| hypothetical protein TRV_01262 [Trichophyton verrucosum HKI 0517] gi|291176191|gb|EFE31992.1| hypothetical protein ARB_01245 [Arthroderma benhamiae CBS 112371] gi|291188609|gb|EFE43939.1| hypothetical protein TRV_01262 [Trichophyton verrucosum HKI 0517] gi|326473101|gb|EGD97110.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Trichophyton tonsurans CBS 112818] gi|326477944|gb|EGE01954.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Trichophyton equinum CBS 127.97] Length = 216 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 115 ERCIACKL--CEAICPAQAITIEAEERVDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 172 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 173 ESP----------NAEYATETREELLYNKEKLLANGDKWE 202 >gi|256810207|ref|YP_003127576.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793407|gb|ACV24076.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 657 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C VCP++ E G I + CI CG Sbjct: 239 YVDEDVCTGCG--ACAAVCPIEVPNEFDLGLGTRKAIYVPFPQAVPLIYTIDMEHCIRCG 296 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C AI+ D +P Sbjct: 297 LCEKACGPGAIRYDQKPEE 315 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECIDCGVCEPECPVDA 54 V + C C C ++CP + E + L ++ C CG C CP A Sbjct: 576 AVVDEDVCGGC--QVCAKMCPYNAISYVEKDGHLVAQVNDVACKGCGACAGACPSGA 630 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 13/30 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + D C C VC CP +AI + G Sbjct: 577 VVDEDVCGGCQVCAKMCPYNAISYVEKDGH 606 >gi|253997321|ref|YP_003049385.1| RnfABCDGE type electron transport complex subunit B [Methylotenera mobilis JLW8] gi|253984000|gb|ACT48858.1| electron transport complex, RnfABCDGE type, B subunit [Methylotenera mobilis JLW8] Length = 200 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 7/69 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK---- 56 ++ CI C T C++ CPVD + I EC C +C CPVD I Sbjct: 107 AFIDEATCIGC--TLCIQACPVDAILGAAKHMHTIIASECTGCELCLAPCPVDCISMQPL 164 Query: 57 PDTEPGLEL 65 +T + Sbjct: 165 AETPDNWKW 173 >gi|215488858|ref|YP_002331289.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O127:H6 str. E2348/69] gi|312968084|ref|ZP_07782295.1| iron-sulfur protein [Escherichia coli 2362-75] gi|215266930|emb|CAS11373.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O127:H6 str. E2348/69] gi|312287343|gb|EFR15252.1| iron-sulfur protein [Escherichia coli 2362-75] Length = 157 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|168216021|ref|ZP_02641646.1| nitroreductase family protein [Clostridium perfringens NCTC 8239] gi|182381714|gb|EDT79193.1| nitroreductase family protein [Clostridium perfringens NCTC 8239] Length = 272 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V T CI C T C++ C V + I + C++CG C CP +A+ D++ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEMLDGKAHIKNESCMECGHCIAICPKEAV-SDSD 57 Query: 61 PGLELWLKINSEYATQ 76 + + N + Sbjct: 58 YDMSKIQEYNKDSFDI 73 >gi|104779570|ref|YP_606068.1| ferredoxin 4Fe-4S [Pseudomonas entomophila L48] gi|95108557|emb|CAK13251.1| Ferredoxin 4Fe-4S [Pseudomonas entomophila L48] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTK 83 I P E + E ++ IT K Sbjct: 59 I-----PLDEAHPETEDELMAKYRRITGK 82 >gi|78224540|ref|YP_386287.1| NADH dehydrogenase I subunit F [Geobacter metallireducens GS-15] gi|78195795|gb|ABB33562.1| NADH dehydrogenase I, F subunit [Geobacter metallireducens GS-15] Length = 591 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ E C+ C C + CPVD E + ++C C C C AI+ Sbjct: 540 VIEEKCVKCG--ACFKACPVDAIVWEKGQVAYLDKEKCTKCKSCYDACRFMAIE 591 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP +C E + I ++C+ CG C CPVDAI + Sbjct: 527 CPSNCCKELLLWQVI-EEKCVKCGACFKACPVDAIVWE 563 >gi|57239100|ref|YP_180236.1| NADH dehydrogenase subunit I [Ehrlichia ruminantium str. Welgevonden] gi|58579047|ref|YP_197259.1| NADH dehydrogenase subunit I [Ehrlichia ruminantium str. Welgevonden] gi|58617106|ref|YP_196305.1| NADH dehydrogenase subunit I [Ehrlichia ruminantium str. Gardel] gi|75507519|sp|Q5FHN1|NUOI_EHRRG RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81672815|sp|Q5HBF8|NUOI_EHRRW RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|57161179|emb|CAH58093.1| NADH-quinone oxidoreductase chain I [Ehrlichia ruminantium str. Welgevonden] gi|58416718|emb|CAI27831.1| NADH-quinone oxidoreductase chain I [Ehrlichia ruminantium str. Gardel] gi|58417673|emb|CAI26877.1| NADH-quinone oxidoreductase chain I [Ehrlichia ruminantium str. Welgevonden] Length = 168 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENF-----LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP + +N I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAICPAQAITIEAQERDTDNSRRTVRYDIDMTKCIYCGFCQEACPVDAI 123 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 108 CIYCGF--CQEACPVDAIVEGPNFEY 131 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + + Sbjct: 66 ERCIACKLCEAICPAQAITIEAQE 89 >gi|288942581|ref|YP_003444821.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Allochromatium vinosum DSM 180] gi|2811081|sp|P00208|FER_ALLVD RecName: Full=Ferredoxin gi|1518927|gb|AAC44333.1| ferredoxin [Allochromatium vinosum DSM 180] gi|288897953|gb|ADC63789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Allochromatium vinosum DSM 180] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP +G+ I P C +C C CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAISQGDETYVIEPSLCTECVGHYETSQCVEVCPVDC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IIKDPSHEE 67 >gi|310780235|ref|YP_003968567.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749558|gb|ADO84219.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 59 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y + + CI C C VCPV C E + I CIDCG C CPV+ I P Sbjct: 1 MAYRINQSECIACG--ACEPVCPVSCISEVVDGKREIDESACIDCGACAGVCPVECIAP 57 >gi|298481236|ref|ZP_06999430.1| ferredoxin-type protein [Bacteroides sp. D22] gi|298272810|gb|EFI14377.1| ferredoxin-type protein [Bacteroides sp. D22] Length = 515 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 418 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 477 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 478 CPARPFRAIYIEGNPVQKE 496 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 20/63 (31%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECI------DCGVCEPECPV 52 +C +C VCP ++ + CI CG C CP Sbjct: 392 DCTVCGD-----VCPNGAILPISVEQKHLTQMGYVVFIEENCIVYTDGTSCGACSEHCPT 446 Query: 53 DAI 55 A+ Sbjct: 447 QAV 449 >gi|322418616|ref|YP_004197839.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Geobacter sp. M18] gi|320125003|gb|ADW12563.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M18] Length = 428 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 5 VTEN--CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 VT+ C C C +CPV + + + C+ CGVC CP A++ + Sbjct: 286 VTDPARCTGCG--RCTTICPVHAIAMVPQAAGSKAQLTSELCLGCGVCARNCPAGAVRLE 343 >gi|227358151|ref|ZP_03842492.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] gi|227161487|gb|EEI46524.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] Length = 223 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVD 53 +C C+ C+ VCP E + ++ ++CI C C CP Sbjct: 91 SCQQCEDAPCISVCPTGASWRDESNGIVRVNKEKCIGCSYCISACPYQ 138 >gi|255658485|ref|ZP_05403894.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Mitsuokella multacida DSM 20544] gi|260849283|gb|EEX69290.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Mitsuokella multacida DSM 20544] Length = 614 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 4 VVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ + C CK C+ CP +G + I +C CG+C CP DAI+ Sbjct: 552 VLQDACRKCK--KCIREIGCPGIVVEDGN--IKIDASQCTGCGICADICPFDAIE 602 >gi|117617460|ref|YP_857144.1| electron transport complex protein RnfB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166225078|sp|A0KLJ3|RNFB_AERHH RecName: Full=Electron transport complex protein rnfB gi|117558867|gb|ABK35815.1| electron transport complex, RnfABCDGE type, B subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 187 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + DEC C +C CP D I+ Sbjct: 108 AFIHEDQCIGC--TKCIQACPVDAIVGATKAMHTVIADECTGCDLCVDPCPTDCIE 161 >gi|91775203|ref|YP_544959.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacillus flagellatus KT] gi|91775347|ref|YP_545103.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacillus flagellatus KT] gi|91709190|gb|ABE49118.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacillus flagellatus KT] gi|91709334|gb|ABE49262.1| electron transport complex, RnfABCDGE type, B subunit [Methylobacillus flagellatus KT] Length = 216 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ E CI C T C++ CPVD + + DEC C +C CP++ I Sbjct: 75 MRAVIDEARCIGC--TLCIKACPVDAILGAHKQMHTVIADECTGCELCLVPCPMECIDMV 132 Query: 57 PDTEPGLE 64 P E + Sbjct: 133 PLIEQDWD 140 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%) Query: 22 PVDCFYEGEN---FLAIHPDECIDCGVCEPECPVDAI 55 P++ F+ I CI C +C CPVDAI Sbjct: 63 PLNPFHGATRPKMRAVIDEARCIGCTLCIKACPVDAI 99 >gi|11095245|gb|AAG29808.1|AF249899_1 carbon monoxide dehydrogenase subunit CooF [Carboxydothermus hydrogenoformans] Length = 183 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E C CK C+E P FY+ E + ++C CG+CE CP AI+ Sbjct: 98 EQCKHCKRAKCIEAYPQGALFYDEEGRVVCSEEKCTGCGLCEKACPFHAIR 148 >gi|45357879|ref|NP_987436.1| indolepyruvate oxidoreductase subunit alpha 1 [Methanococcus maripaludis S2] gi|45047439|emb|CAF29872.1| indolepyruvate oxidoreductase subunit alpha 1 [Methanococcus maripaludis S2] Length = 612 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Query: 3 YVVTEN-CILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 YV+ +N CI CK CVE CP + I D C CG+C+ CP +A+ Sbjct: 556 YVIDKNKCINCK--ICVERLGCP--AITMNDEIPEIM-DNCTGCGLCKAVCPANAV 606 >gi|332184173|gb|AEE26427.1| Ferredoxin [Francisella cf. novicida 3523] Length = 81 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP + +GE + I P++C +C C CP+ Sbjct: 1 MALLITDECINCD--ICEPECPNEAISQGEEYYEIDPNKCTECVGHFDESQCTKVCPIRC 58 Query: 55 IKPD 58 I D Sbjct: 59 IIID 62 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C +CEPECP +AI E Sbjct: 7 DECINCDICEPECPNEAISQGEE 29 >gi|331670408|ref|ZP_08371247.1| putative electron transport protein YsaA [Escherichia coli TA271] gi|323934872|gb|EGB31254.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|331062470|gb|EGI34390.1| putative electron transport protein YsaA [Escherichia coli TA271] Length = 157 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|307729066|ref|YP_003906290.1| electron transport complex, RnfABCDGE type subunit B [Burkholderia sp. CCGE1003] gi|307583601|gb|ADN56999.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. CCGE1003] Length = 321 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD----TEPGL 63 CI C T C++ CPVD + + + C C +C P CPVD I G Sbjct: 89 CIGC--TLCMQACPVDAIVGAPKHMHTVVAELCTGCDLCVPPCPVDCISMLPVTGEATGW 146 Query: 64 ELWLKINSEYATQ 76 + W + ++ A + Sbjct: 147 DAWSQPQADAARE 159 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 VIDEQICIGCTLCMQACPVDAI 104 >gi|237859143|gb|ACR23747.1| RnfB [Acetobacterium woodii DSM 1030] Length = 333 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 Y++ ENCI C C + CPV+ I D CI CG+C +C AI+ Sbjct: 272 AYIIEENCIACGL--CAKNCPVNAITGEIKKPPYVIDHDMCIGCGICFDKCRKSAIE 326 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C C +CV+ CP++C G++ I + CI CG+C CPV+AI + + Sbjct: 244 DKCRQC--YECVDKCPMNCISGDVEYGKSTAYIIEENCIACGLCAKNCPVNAITGEIKKP 301 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + C VCP D GE+ L + P++C CG C CP +I E Sbjct: 144 GYGTCKAVCPFDAIVIGEDGLPKVDPEKCTSCGKCVEACP-KSIMTLVPEAQE 195 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T CI C CV+ C D N I D+C C C +CP++ I D E Sbjct: 214 TTACIACG--ACVKACRFDAITVENNCAKIDYDKCRQCYECVDKCPMNCISGDVE 266 >gi|237735382|ref|ZP_04565863.1| 4Fe-4S ferredoxin [Mollicutes bacterium D7] gi|229381127|gb|EEO31218.1| 4Fe-4S ferredoxin [Coprobacillus sp. D7] Length = 257 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E CI C C++VCP++ E + I D C+ C C CP AI E +E Sbjct: 178 EKCIGC--QTCIKVCPMNNIELIEGKIKI-KDNCMTCLACFHWCPTAAIYMSKEKEIE 232 >gi|269861875|ref|XP_002650615.1| RNase L inhibitor [Enterocytozoon bieneusi H348] gi|220065879|gb|EED43441.1| RNase L inhibitor [Enterocytozoon bieneusi H348] Length = 379 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 4 VVTENCI--LCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C +C CPV+ E + CI CG CE +CP +AI Sbjct: 7 VNEELCKPDKC-AAECKRYCPVNRIGKKCIEIPKKAVVDETLCIGCGQCEKKCPFNAI 63 >gi|208779139|ref|ZP_03246485.1| 4Fe-4S binding domain protein [Francisella novicida FTG] gi|208744939|gb|EDZ91237.1| 4Fe-4S binding domain protein [Francisella novicida FTG] Length = 81 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M ++T+ CI C C CP + +GE + I P++C +C C CP+ Sbjct: 1 MALLITDECINCD--ICEPECPNEAISQGEEYYEIDPNKCTECVGHFEESQCTKVCPIRC 58 Query: 55 IKPD 58 I D Sbjct: 59 IIID 62 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C +CEPECP +AI E Sbjct: 7 DECINCDICEPECPNEAISQGEE 29 >gi|134046385|ref|YP_001097870.1| thiamine pyrophosphate binding domain-containing protein [Methanococcus maripaludis C5] gi|132664010|gb|ABO35656.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Methanococcus maripaludis C5] Length = 612 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 3 YVVTEN-CILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 YV+ +N C CK CVE CP E I + C CG+C+ CP DAI Sbjct: 556 YVIDKNKCTSCK--ICVERLGCP--AITLSEKIPEIM-ETCTGCGLCKAVCPADAINEVD 610 Query: 60 E 60 E Sbjct: 611 E 611 >gi|83589957|ref|YP_429966.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83572871|gb|ABC19423.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 365 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C C CP E I+ + CI CG C CP AIK Sbjct: 193 EECIGCG--KCRRWCPAGAITVTE-KATINGELCIGCGECTVTCPRRAIK 239 >gi|20094675|ref|NP_614522.1| MinD family protein [Methanopyrus kandleri AV19] gi|19887839|gb|AAM02452.1| MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Methanopyrus kandleri AV19] Length = 259 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 10/57 (17%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V T++C+ C C EVCP D P C CG+C CP DAI+ + E Sbjct: 64 VKTDDCVECG--RCSEVCPWDAVE--------DPTACDGCGICAIACPEDAIEFEPE 110 >gi|15643163|ref|NP_228207.1| glutamate synthase, alpha subunit [Thermotoga maritima MSB8] gi|148269661|ref|YP_001244121.1| glutamate synthase (NADPH) [Thermotoga petrophila RKU-1] gi|170288336|ref|YP_001738574.1| glutamate synthase (NADPH) [Thermotoga sp. RQ2] gi|281411629|ref|YP_003345708.1| glutamate synthase (NADPH) [Thermotoga naphthophila RKU-10] gi|4980901|gb|AAD35482.1|AE001719_8 glutamate synthase, alpha subunit [Thermotoga maritima MSB8] gi|147735205|gb|ABQ46545.1| glutamate synthase (NADPH) GltB2 subunit [Thermotoga petrophila RKU-1] gi|170175839|gb|ACB08891.1| Glutamate synthase (NADPH) [Thermotoga sp. RQ2] gi|281372732|gb|ADA66294.1| Glutamate synthase (NADPH) [Thermotoga naphthophila RKU-10] Length = 507 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 3 YVVTEN---CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV + CI C CV VC + E N + +C+ C CE CP +AI Sbjct: 10 FVVERDDYKCIRCL--ACVRVCSYGANFYDENANRVYTENTKCVGCHFCEAICPTEAI 65 >gi|89896716|ref|YP_520203.1| NADH dehydrogenase I chain F [Desulfitobacterium hafniense Y51] gi|89336164|dbj|BAE85759.1| NADH dehydrogenase I chain F [Desulfitobacterium hafniense Y51] Length = 597 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 +TY + E C C C CP +C +N I + CI CG C C A+ Sbjct: 540 LTYSIDAEKCKKCGL--CARNCPANCISGNKNTPYVIDGERCIRCGSCMDSCKFGAV 594 >gi|148259363|ref|YP_001233490.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Acidiphilium cryptum JF-5] gi|146401044|gb|ABQ29571.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidiphilium cryptum JF-5] Length = 180 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +E C C + CV+ CP ++ G N + + C C C CP D Sbjct: 55 SERCNHCSNATCVDACPTGASQYWNGSNIVVVDATRCTGCKACIAACPYD 104 >gi|85717021|ref|ZP_01047983.1| NADH dehydrogenase subunit I [Nitrobacter sp. Nb-311A] gi|85696145|gb|EAQ34041.1| NADH dehydrogenase subunit I [Nitrobacter sp. Nb-311A] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|332297422|ref|YP_004439344.1| Fe-S cluster domain protein [Treponema brennaborense DSM 12168] gi|332180525|gb|AEE16213.1| Fe-S cluster domain protein [Treponema brennaborense DSM 12168] Length = 463 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C T CV CP + I + CIDCG C CP A Sbjct: 18 CKGC--TICVTGCPAEAIRVRNGKAVIMEERCIDCGECIRHCPNKA 61 >gi|310778774|ref|YP_003967107.1| nitroreductase [Ilyobacter polytropus DSM 2926] gi|309748097|gb|ADO82759.1| nitroreductase [Ilyobacter polytropus DSM 2926] Length = 273 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 1 MTYVVTENCILCKHTDCVEVC-PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V E CI C CV+ C P D + I+ C CG C CP DA+ D Sbjct: 1 MMIVNEEKCIGCGL--CVKDCFPKD-IELIDKKAKINNVTCFKCGHCIAVCPTDAVTTD- 56 Query: 60 EPGLELWLKINSEYATQWPN 79 E + ++ + E PN Sbjct: 57 EFDMSEVIEYDKEKFQVDPN 76 >gi|297539545|ref|YP_003675314.1| RnfABCDGE type electron transport complex subunit B [Methylotenera sp. 301] gi|297258892|gb|ADI30737.1| electron transport complex, RnfABCDGE type, B subunit [Methylotenera sp. 301] Length = 190 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ CI C T C++ CPVD + I EC C +C CPVD I Sbjct: 106 AFIDEATCIGC--TLCIQACPVDAILGAAKHMHTIISSECTGCELCLAPCPVDCI 158 >gi|59712159|ref|YP_204935.1| formate-dependent nitrite reductase, 4Fe4S subunit [Vibrio fischeri ES114] gi|59480260|gb|AAW86047.1| formate-dependent nitrite reductase, 4Fe4S subunit [Vibrio fischeri ES114] Length = 228 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENAPCVMVCPTGAAYKDETTGIVDVHNEKCVGCGYCLAACPYQ 145 >gi|310827928|ref|YP_003960285.1| hypothetical protein ELI_2339 [Eubacterium limosum KIST612] gi|308739662|gb|ADO37322.1| hypothetical protein ELI_2339 [Eubacterium limosum KIST612] Length = 275 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + C CK C EVCP+ + + I+ CI CG C +CPV A D Sbjct: 203 DTCTDCKL--CSEVCPMGSIS--HDDVQIYTGICIKCGACIKKCPVHARYYDD 251 >gi|297526779|ref|YP_003668803.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] gi|297255695|gb|ADI31904.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Staphylothermus hellenicus DSM 12710] Length = 161 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Query: 17 CVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 C +CP + + + I+PD+CI CGVC P+CP AI Sbjct: 45 CANICPFNAIEMEKIYDLPRINPDKCIGCGVCVPQCPGLAIF 86 >gi|268592682|ref|ZP_06126903.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] gi|291311822|gb|EFE52275.1| dimethylsulfoxide reductase, chain B [Providencia rettgeri DSM 1131] Length = 180 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV CP + E + + + D+C+ C C CP +A + D Sbjct: 58 ACNHCDDPQCVSHCPTTAMHKREEDGVVLVDHDKCVGCRYCTWACPYEAPQFD 110 >gi|218782860|ref|YP_002434178.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Desulfatibacillum alkenivorans AK-01] gi|218764244|gb|ACL06710.1| Indolepyruvate ferredoxin oxidoreductase, alpha/beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 617 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Query: 11 LCKHTD-CVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CK CV+ CP Y N +AI+ ++CI C VC CP AI P Sbjct: 567 KCKDHRLCVDALGCP--AMYVENNKVAINAEQCIGCAVCAQVCPEHAIVP 614 >gi|169343842|ref|ZP_02864839.1| nitroreductase family protein [Clostridium perfringens C str. JGS1495] gi|169297962|gb|EDS80053.1| nitroreductase family protein [Clostridium perfringens C str. JGS1495] Length = 272 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 M V T CI C T C++ C V + I + CI+CG C CP +A+ Sbjct: 1 MMNVDTSKCIGC--TLCMQDCIVSDIEIVDGKAHIKNESCIECGHCIAICPKEAVSDSD 57 >gi|171185947|ref|YP_001794866.1| putative ATPase RIL [Thermoproteus neutrophilus V24Sta] gi|170935159|gb|ACB40420.1| ABC transporter related [Thermoproteus neutrophilus V24Sta] Length = 590 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 9/57 (15%) Query: 7 ENCI--LCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C +CV+ CPV+ E I CI CG+C +CP AI Sbjct: 10 DACQPKKCG-QECVKYCPVNRSGKVVYIDEQLKKAVISEALCIGCGICVHKCPFQAI 65 >gi|153806402|ref|ZP_01959070.1| hypothetical protein BACCAC_00665 [Bacteroides caccae ATCC 43185] gi|149131079|gb|EDM22285.1| hypothetical protein BACCAC_00665 [Bacteroides caccae ATCC 43185] Length = 501 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 404 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 463 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 464 CPARPFRAIYIEGNPVQKE 482 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 20/63 (31%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECI------DCGVCEPECPV 52 +C +C VCP ++ + CI CG C CP Sbjct: 378 DCTVCGD-----VCPNGAILPISVKQKHLTQMGYVVFIEENCIVYTDGTSCGACSEHCPT 432 Query: 53 DAI 55 A+ Sbjct: 433 QAV 435 >gi|29345451|ref|NP_808954.1| F420H2:quinone oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|298481942|ref|ZP_07000131.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] gi|29337343|gb|AAO75148.1| F420H2:quinone oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|298271806|gb|EFI13378.1| F420H2:quinone oxidoreductase [Bacteroides sp. D22] Length = 400 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 9/53 (16%) Query: 9 CILCKHTDCVEVCPVDCF---YEGENFLA--IHPDECIDCGVCEPECP--VDA 54 C C+ CV CP+ C + E F+ + CIDCG CE CP V+A Sbjct: 10 CCGCE--ACVSSCPLQCIELVKDKEGFMYPQVDTARCIDCGKCEKACPELVEA 60 >gi|116750393|ref|YP_847080.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116750435|ref|YP_847122.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116699457|gb|ABK18645.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] gi|116699499|gb|ABK18687.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1006 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 7/66 (10%) Query: 9 CILCKHTDCVEVCPVDC--FYEGEN---FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C CV +CP F E I+P C CG+C C AI+ Sbjct: 940 CSGCGV--CVNICPFSAPRFMESGRDAGKAEINPALCKGCGLCAASCRSGAIRLKGFDDA 997 Query: 64 ELWLKI 69 +++ I Sbjct: 998 QIFAMI 1003 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 20/77 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCG 44 ++ E C C C +VCP E I C+ CG Sbjct: 106 FIDLERCTACGQ--CRQVCPASAINEFNQGIDRREATFMRYPQAIPRGYGIDRASCLGCG 163 Query: 45 VCEPECPVDAIKPDTEP 61 +CE C A++ D +P Sbjct: 164 LCEKVCLAQAVRYDDQP 180 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 +P+ C CGVC CP A + +IN Sbjct: 936 NPNVCSGCGVCVNICPFSAPRFMESGRDAGKAEIN 970 >gi|325279072|ref|YP_004251614.1| putative ferredoxin, putative iron-sulfur protein [Odoribacter splanchnicus DSM 20712] gi|324310881|gb|ADY31434.1| putative ferredoxin, putative iron-sulfur protein [Odoribacter splanchnicus DSM 20712] Length = 260 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V E C C C+ +CPV E + CI C C +CP +A +T Sbjct: 188 TVAELCTQCGF--CIGICPVQAIRL-EEEIVSDAGRCIKCCACVKQCPNEARLFETPYTD 244 Query: 64 ELW 66 L+ Sbjct: 245 LLF 247 >gi|302336532|ref|YP_003801739.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] gi|301320372|gb|ADK68859.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Olsenella uli DSM 7084] Length = 302 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +V + C+ C C VC +D +N ++ ECI CG C CPV AI+ D Sbjct: 234 HVDADKCVKCG--KCARVCKMDVDI-TKNSSSL---ECIRCGECAKACPVKAIEVDL 284 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 17 CVEVCPVDCFYEGENF-----LAIHPDECIDCGVCEPECPVD 53 C +CP+ FY N + D+C+ CG C C +D Sbjct: 212 CKWICPLGAFYSLFNKVSLLQYHVDADKCVKCGKCARVCKMD 253 >gi|300856106|ref|YP_003781090.1| nitroreductase family protein fused to ferredoxin domain-containing protein [Clostridium ljungdahlii DSM 13528] gi|300436221|gb|ADK15988.1| nitroreductase family protein fused to ferredoxin domain protein [Clostridium ljungdahlii DSM 13528] Length = 272 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 M V +E CI C CV+ C + I+ CI CG C CP A+ D E Sbjct: 1 MMNVNSEKCIGCGQ--CVKDCFARDIEIIDGKAKINNITCIKCGHCIAVCPKSAVSTD-E 57 Query: 61 PGLELWLKINSE 72 +E + N E Sbjct: 58 YNMEDIKEYNKE 69 >gi|296113921|ref|YP_003627859.1| 4Fe-4S ferredoxin [Moraxella catarrhalis RH4] gi|295921615|gb|ADG61966.1| 4Fe-4S ferredoxin [Moraxella catarrhalis RH4] gi|326559362|gb|EGE09789.1| 4Fe-4S ferredoxin [Moraxella catarrhalis 7169] gi|326562486|gb|EGE12804.1| 4Fe-4S ferredoxin [Moraxella catarrhalis 46P47B1] gi|326564262|gb|EGE14492.1| 4Fe-4S ferredoxin [Moraxella catarrhalis 103P14B1] gi|326567195|gb|EGE17315.1| 4Fe-4S ferredoxin [Moraxella catarrhalis 12P80B1] gi|326568298|gb|EGE18380.1| 4Fe-4S ferredoxin [Moraxella catarrhalis BC8] gi|326569999|gb|EGE20046.1| 4Fe-4S ferredoxin [Moraxella catarrhalis BC1] gi|326570080|gb|EGE20126.1| 4Fe-4S ferredoxin [Moraxella catarrhalis BC7] gi|326572935|gb|EGE22920.1| 4Fe-4S ferredoxin [Moraxella catarrhalis CO72] gi|326573819|gb|EGE23772.1| 4Fe-4S ferredoxin [Moraxella catarrhalis O35E] gi|326574761|gb|EGE24697.1| 4Fe-4S ferredoxin [Moraxella catarrhalis 101P30B1] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 13/74 (17%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +TE CI C C VCP + G++ I+P C +C C CPVD Sbjct: 1 MALKITEECINCDV--CEPVCPNEAISAGDDIYVINPALCTECVGHYDTPQCVDICPVDC 58 Query: 55 I-----KPDTEPGL 63 I P+TE L Sbjct: 59 IPKDPKFPETEDEL 72 >gi|291549368|emb|CBL25630.1| NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Ruminococcus torques L2-14] Length = 622 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C C + C + CPV+ ++ I +CI CG C CP A+ + Sbjct: 572 EKCKGC--SKCAKNCPVNAITGKIKSPFTIDNSKCIKCGSCIDNCPFGAVYTE 622 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I P++C C C CPV+AI Sbjct: 569 IDPEKCKGCSKCAKNCPVNAI 589 >gi|300023445|ref|YP_003756056.1| NADH-quinone oxidoreductase, chain I [Hyphomicrobium denitrificans ATCC 51888] gi|299525266|gb|ADJ23735.1| NADH-quinone oxidoreductase, chain I [Hyphomicrobium denitrificans ATCC 51888] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMTKCIYCGLCQEACPVDAI 117 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 60 ERCIACKLCEAICPAQAITIEAGP 83 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGL--CQEACPVDAIVEGPNF 123 >gi|254797156|ref|YP_003081994.1| NADH-quinone oxidoreductase subunit i [Neorickettsia risticii str. Illinois] gi|254590388|gb|ACT69750.1| NADH-quinone oxidoreductase subunit i [Neorickettsia risticii str. Illinois] Length = 160 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 16/77 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 58 ERCIACKL--CEVICPAQAITIEAAPRESDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 115 Query: 56 KPDTEPGLELWLKINSE 72 E + + N E Sbjct: 116 ---VEGPNFEFARENRE 129 >gi|261346110|ref|ZP_05973754.1| dimethylsulfoxide reductase, chain B [Providencia rustigianii DSM 4541] gi|282565764|gb|EFB71299.1| dimethylsulfoxide reductase, chain B [Providencia rustigianii DSM 4541] Length = 205 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAI-HPDECIDCGVCEPECPVDAIKPDTE 60 Y ++ +C C + CVE CP + E+ L + C+ C CE CP A + D + Sbjct: 60 YYLSISCNHCSNPTCVEGCPTGAMHKRAEDGLVVVDQSICVGCRYCELRCPYGAPQFDEK 119 Query: 61 PGL 63 L Sbjct: 120 KKL 122 >gi|170748469|ref|YP_001754729.1| NADH dehydrogenase subunit I [Methylobacterium radiotolerans JCM 2831] gi|226737401|sp|B1LUM8|NUOI_METRJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|170654991|gb|ACB24046.1| NADH-quinone oxidoreductase, chain I [Methylobacterium radiotolerans JCM 2831] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%) Query: 21 CPVDCFYEGENFLAIHP--------DECIDCGVCEPECPVDAIKPDTEP 61 P + + G F H + CI C +CE CP AI + P Sbjct: 35 YPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|297619129|ref|YP_003707234.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Methanococcus voltae A3] gi|297378106|gb|ADI36261.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Methanococcus voltae A3] Length = 602 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV +E C CK C+ + CP F I C+ CG+C C AI+ Sbjct: 543 YVNSEKCNGCKL--CLRIGCPAISFNNETKKAEIDKSLCVGCGLCVDICKRSAIE 595 >gi|134046735|ref|YP_001098220.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132664360|gb|ABO36006.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Methanococcus maripaludis C5] Length = 658 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 23/86 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV + C C C CP++ E G I + CIDCG Sbjct: 240 YVDEDICTGCG--ACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKEHCIDCG 297 Query: 45 VCEPECPVDAIKPDTEPGLELWLKIN 70 +C C +A++ D +P LKIN Sbjct: 298 LCAKVCCAEAVRYDQKPQE---LKIN 320 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDA 54 V E C CK C +CP + +G C CG C CP A Sbjct: 577 ATVNEEVCGGCKV--CALMCPYNAITYEEKDGHLVAVTDDVACKGCGSCAAACPSGA 631 >gi|153000588|ref|YP_001366269.1| electron transport complex protein RnfB [Shewanella baltica OS185] gi|160875224|ref|YP_001554540.1| electron transport complex protein RnfB [Shewanella baltica OS195] gi|217973445|ref|YP_002358196.1| electron transport complex protein RnfB [Shewanella baltica OS223] gi|304408662|ref|ZP_07390283.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS183] gi|307305491|ref|ZP_07585239.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica BA175] gi|151365206|gb|ABS08206.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS185] gi|160860746|gb|ABX49280.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS195] gi|217498580|gb|ACK46773.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS223] gi|304352483|gb|EFM16880.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS183] gi|306911794|gb|EFN42219.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica BA175] gi|315267417|gb|ADT94270.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS678] Length = 204 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DT 59 Y+ + CI C T C++ CPVD + + +C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTTDCTGCDLCVEPCPVDCIDMIPV 164 Query: 60 EPGLELW 66 P L+ W Sbjct: 165 TPNLKNW 171 >gi|158320025|ref|YP_001512532.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] gi|158140224|gb|ABW18536.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] Length = 623 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 6 TENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 +E C C + C +CPV + + I+ ++CI CG C C AIK Sbjct: 572 SELCKGC--SKCSRICPVGAIDGKIKEPYIINQEKCIKCGACIESCAFAAIKE 622 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP +G + I + C C C CPV AI Sbjct: 557 CPT-RTCQGLKVIEITSELCKGCSKCSRICPVGAI 590 >gi|51894343|ref|YP_077034.1| iron hydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|51858032|dbj|BAD42190.1| iron hydrogenase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 618 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 5/52 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFY---EGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C C CPVD + I + CI CG C C +A+ Sbjct: 567 ERCKACNV--CARNCPVDAVHGEVRKPETFYIDAEACIKCGTCATVCKFNAV 616 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 CP +F I + C C VC CPVDA+ + ++ + Sbjct: 551 CPAGRCKALTDF-RIDQERCKACNVCARNCPVDAVHGEVRKPETFYIDAEA 600 >gi|323703026|ref|ZP_08114682.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] gi|323532039|gb|EGB21922.1| NADH dehydrogenase (quinone) [Desulfotomaculum nigrificans DSM 574] Length = 613 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 V+ + C C C CP + I+ + C CG+C C +AI Sbjct: 549 VLADACKGCG--RCSRECPTGAITGEKKMPFTINQEMCARCGLCISVCKFNAI 599 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 D C CG C ECP AI + + Sbjct: 552 DACKGCGRCSRECPTGAITGEKK 574 >gi|296536148|ref|ZP_06898276.1| NADH-quinone oxidoreductase subunit I [Roseomonas cervicalis ATCC 49957] gi|296263519|gb|EFH10016.1| NADH-quinone oxidoreductase subunit I [Roseomonas cervicalis ATCC 49957] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+CE CPVDAI Sbjct: 62 ERCIACKL--CEAVCPALAITIEAEPREDGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 118 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 62 ERCIACKLCEAVCPALAITIEAEPRED 88 Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGL--CEEACPVDAIVEGPNF 124 >gi|152986272|ref|YP_001345851.1| 4Fe-4S ferredoxin [Pseudomonas aeruginosa PA7] gi|150961430|gb|ABR83455.1| ferredoxin (4Fe-4S) [Pseudomonas aeruginosa PA7] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDT 59 I D Sbjct: 59 IPLDE 63 >gi|52549644|gb|AAU83493.1| heterodisulfide reductase subunit A and related polyferredoxins [uncultured archaeon GZfos29E12] Length = 895 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 19/86 (22%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL---------AIHP--------DECIDCG 44 V + C+ C CV+VCPV+ E + + D CI CG Sbjct: 809 AVVDEQICVGCGV--CVDVCPVEAIELTEELVPVVTFGVATVVSAMKKVAKVGDGCIGCG 866 Query: 45 VCEPECPVDAIKPDTEPGLELWLKIN 70 C CP A+ +L+ +++ Sbjct: 867 SCASYCPSGAMSLKHFRDRQLYAQLD 892 >gi|91789108|ref|YP_550060.1| NADH dehydrogenase subunit I [Polaromonas sp. JS666] gi|123164661|sp|Q127Y0|NUOI_POLSJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|91698333|gb|ABE45162.1| NADH dehydrogenase subunit I [Polaromonas sp. JS666] Length = 165 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G + I +CI CG CE CPVDAI Sbjct: 64 ERCIACKL--CEAVCPALAITIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAI 120 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI ++E Sbjct: 64 ERCIACKLCEAVCPALAITIESE 86 >gi|83643884|ref|YP_432319.1| ferredoxin [Hahella chejuensis KCTC 2396] gi|83631927|gb|ABC27894.1| Ferredoxin [Hahella chejuensis KCTC 2396] Length = 85 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + GE I P++C +C C+ CPVD Sbjct: 1 MALMITDDCINCDV--CEPECPNEAISPGEEIYIIDPNKCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPLDPD 64 >gi|322835430|ref|YP_004215456.1| polyferredoxin [Rahnella sp. Y9602] gi|321170631|gb|ADW76329.1| putative polyferredoxin [Rahnella sp. Y9602] Length = 293 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 2/54 (3%) Query: 16 DCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C +VCP E + + P CI CG C CP A + P + Sbjct: 31 ACADVCPTGAVTLNEEGMIEMDPQACIGCGYCLFNCPTGAPE-GIAPPQRHYRA 83 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+LC C VCP L + P +C CG CE C AI Sbjct: 197 CVLCG--ACSRVCPEQAIRLDNLALTLDPVKCTGCGNCEAVCFDGAI 241 >gi|331231867|ref|XP_003328596.1| NADH-ubiquinone oxidoreductase subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307586|gb|EFP84177.1| NADH-ubiquinone oxidoreductase subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 259 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 158 ERCIACKL--CEAICPAQAITIESETREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 214 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI ++E Sbjct: 158 ERCIACKLCEAICPAQAITIESE 180 >gi|260576927|ref|ZP_05844909.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] gi|259020863|gb|EEW24177.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Rhodobacter sp. SW2] Length = 544 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 9 CILCKHT----DCVEVCPVDC-FYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 C+ C + C VCP + G I+ D C CG+C ECP AI Sbjct: 485 CLSCGNCFECDTCYGVCPDNAVIKLGSGMGFTINLDYCKGCGICAAECPCGAI 537 >gi|168186747|ref|ZP_02621382.1| polyferredoxin [Clostridium botulinum C str. Eklund] gi|169295268|gb|EDS77401.1| polyferredoxin [Clostridium botulinum C str. Eklund] Length = 294 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C + CP D N I +C++CG+C +CP AI+ Sbjct: 216 CIGCGL--CAKACPKDAITMENNLPVIDYSKCVNCGLCAMKCPTKAIQ 261 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CV C D + ++ D C+ CG C CP + I+ Sbjct: 144 GYGSCVSACKFDAIEIVDGIAKVNKDNCVACGACVSTCPKNIIE 187 Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 18/81 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCE 47 V +NC+ C CV CP + G + I CI CG+C Sbjct: 166 VNKDNCVACG--ACVSTCPKNIIELVPKKQLVIVSCNSHDRGLDVKNICSTGCIGCGLCA 223 Query: 48 PECPVDAIKPDTEPGLELWLK 68 CP DAI + + + K Sbjct: 224 KACPKDAITMENNLPVIDYSK 244 >gi|134094633|ref|YP_001099708.1| putative iron-sulfur binding protein [Herminiimonas arsenicoxydans] gi|133738536|emb|CAL61581.1| putative ferredoxin [Herminiimonas arsenicoxydans] Length = 699 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Query: 10 ILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 I C C+E+C + N + ++P+ C CG C CP A Sbjct: 326 IGCN--ACIEICSAEAISHNGNHVKVNPNLCAGCGACTTVCPSGA 368 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 V + C LC CV CP + N L C+ CG+CE CP +AI Sbjct: 565 VNRDACTLC--MSCVGACPESALTDNANAPQLRFIEKNCVQCGLCEKTCPENAI 616 Score = 40.5 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC-PVDAI 55 E+CI C C+EVCP + I D+C G C C + AI Sbjct: 199 ESCIRCN--ACIEVCPESAI---DLTYQIDLDKCRSHGDCVKACGSIGAI 243 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 16/38 (42%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + ++ D C C C CP A+ + +++ N Sbjct: 563 VVVNRDACTLCMSCVGACPESALTDNANAPQLRFIEKN 600 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 10/21 (47%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CP AI Sbjct: 196 IDLESCIRCNACIEVCPESAI 216 >gi|48477969|ref|YP_023675.1| ferredoxin [Picrophilus torridus DSM 9790] gi|48430617|gb|AAT43482.1| ferredoxin [Picrophilus torridus DSM 9790] Length = 70 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV +CP D + E + I+ ++CI CG C CP AI + Sbjct: 16 CNYCG--ACVGMCPTDAIFMDETVIDINEEKCIKCGFCVVGCPTGAITAE 63 >gi|29348365|ref|NP_811868.1| putative pyruvate formate-lyase 3 activating enzyme [Bacteroides thetaiotaomicron VPI-5482] gi|253569265|ref|ZP_04846675.1| glycyl-radical enzyme activating family protein [Bacteroides sp. 1_1_6] gi|29340269|gb|AAO78062.1| putative pyruvate formate-lyase 3 activating enzyme [Bacteroides thetaiotaomicron VPI-5482] gi|251841284|gb|EES69365.1| glycyl-radical enzyme activating family protein [Bacteroides sp. 1_1_6] Length = 299 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + + CI C C+ VC + + N L+IH + C DCG C C A Sbjct: 50 IEDKCIHC--FSCITVCEYEVLFIDSNRLSIHRERCTDCGKCTERCTSGA 97 >gi|325261657|ref|ZP_08128395.1| Fe-hydrogenase, beta subunit [Clostridium sp. D5] gi|324033111|gb|EGB94388.1| Fe-hydrogenase, beta subunit [Clostridium sp. D5] Length = 400 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ C C C +VCP DC ++ I +C CG C P C +AI Sbjct: 326 YIDPRLCSGCGD--CADVCPKDCIDGKPKYIYMIDDFDCDRCGKCIPGCSEEAI 377 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 3/36 (8%) Query: 21 CPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CP CF + I P C CG C CP D I Sbjct: 314 CPAGVCFS--AQTIYIDPRLCSGCGDCADVCPKDCI 347 >gi|310780615|ref|YP_003968946.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749938|gb|ADO84598.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 104 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 CI C CVEVCP + + F P EC DC C ECPV AI+ Sbjct: 10 CIGC--RLCVEVCPGNLISLDKKFKAEIYDPRECWDCTACMKECPVQAIE 57 >gi|308270150|emb|CBX26762.1| Ferredoxin-2 [uncultured Desulfobacterium sp.] Length = 95 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIKPDT 59 T+ CI C C+EVCP F I + D C++CG C CP AI D+ Sbjct: 17 TKKCIGCG--RCLEVCPHQVFSLAGKKAIITNFDACMECGACAINCPSTAIFVDS 69 >gi|297493958|gb|ADI40701.1| NADH dehydrogenase Fe-S protein 8 [Miniopterus schreibersii] Length = 166 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG C+ CPVDAI Sbjct: 78 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 134 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 78 ERCIACKLCEAVCPAQAITIEAEPRAD 104 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 119 CIYCGF--CQEACPVDAIVEGPNF 140 >gi|261252995|ref|ZP_05945568.1| iron-sulfur cluster-binding protein [Vibrio orientalis CIP 102891] gi|260936386|gb|EEX92375.1| iron-sulfur cluster-binding protein [Vibrio orientalis CIP 102891] Length = 553 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KPDTEPGL--ELWLK 68 + +++ Sbjct: 233 HYALPNPQDTQKFIE 247 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + + L +CI CG+C CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGSSPSLQFIEQDCIQCGLCTKACP 462 Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|269863568|ref|XP_002651269.1| RNase L inhibitor [Enterocytozoon bieneusi H348] gi|220064840|gb|EED42787.1| RNase L inhibitor [Enterocytozoon bieneusi H348] Length = 296 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 4 VVTENCI--LCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C +C CPV+ E + CI CG CE +CP +AI Sbjct: 16 VNEELCKPDKC-AAECKRYCPVNRIGKKCIEIPKKAVVDETLCIGCGQCEKKCPFNAI 72 >gi|163759532|ref|ZP_02166617.1| NADH dehydrogenase subunit I [Hoeflea phototrophica DFL-43] gi|162283129|gb|EDQ33415.1| NADH dehydrogenase subunit I [Hoeflea phototrophica DFL-43] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 117 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 118 VEGPNFEFATETREELYYDKDRLLA 142 >gi|54261777|ref|NP_998304.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Danio rerio] gi|37194660|gb|AAH58299.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, (NADH-coenzyme Q reductase) [Danio rerio] gi|41107574|gb|AAH65459.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, (NADH-coenzyme Q reductase) [Danio rerio] gi|220678768|emb|CAX13299.1| NADH dehydrogenase (ubiquinone) Fe-S protein 8, (NADH-coenzyme Q reductase) [Danio rerio] Length = 210 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAICPAQAITIEAEPRAD 135 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|77919906|ref|YP_357721.1| Fe binding transcriptional regulator FhlA [Pelobacter carbinolicus DSM 2380] gi|77545989|gb|ABA89551.1| sigma54 specific transcriptional regulator, Fis family [Pelobacter carbinolicus DSM 2380] Length = 747 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 1 MTYVVTE--NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 M ++ T+ C C CV CPV + P CI CG C C A Sbjct: 1 MGHIQTDTQRCRRC--YACVRHCPVKAIRVTRQGTDLSPGRCIGCGRCLQICTQQA 54 >gi|75410723|sp|Q9AIX6|BOXA_AZOEV RecName: Full=Benzoyl-CoA oxygenase component A; AltName: Full=Benzoyl-CoA 2,3-dioxygenase subunit A; AltName: Full=Benzoyl-CoA dioxygenase reductase component gi|12655805|gb|AAK00600.1|AF220510_2 BoxA [Azoarcus evansii] gi|23664440|gb|AAN39377.1| benzoyl-CoA oxygenase component A [Azoarcus evansii] Length = 414 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E+CPVD + + C C C CP AI Sbjct: 19 EICIRCN--TCEEICPVDAITHDSRNYVVKFETCNGCLACISPCPTGAI 65 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 27/75 (36%), Gaps = 11/75 (14%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYA----------TQWPNITTKK 84 I P+ CI C CE CPVDAI D+ + + N A W N+ Sbjct: 16 IDPEICIRCNTCEEICPVDAITHDSRNYVVKFETCNGCLACISPCPTGAIDSWRNVDKAT 75 Query: 85 E-SLPSAAKMDGVKQ 98 SL D + Sbjct: 76 PHSLADQYSWDYLPD 90 >gi|58699331|ref|ZP_00374109.1| NADH dehydrogenase I, I subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58534154|gb|EAL58375.1| NADH dehydrogenase I, I subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 155 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG+C+ CPVDAI Sbjct: 54 ERCIACKL--CEVICPAQAIVIEAEEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 110 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 54 ERCIACKLCEVICPAQAIVIEAEERED 80 Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 95 CIYCGL--CQEACPVDAIVEGPNF 116 >gi|312621606|ref|YP_004023219.1| hypothetical protein Calkro_0500 [Caldicellulosiruptor kronotskyensis 2002] gi|312202073|gb|ADQ45400.1| protein of unknown function DUF362 [Caldicellulosiruptor kronotskyensis 2002] Length = 375 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNACPAQAIEMRSRKAYVDLKKCIRCYCCHELCPAKAIK 363 >gi|308048646|ref|YP_003912212.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307630836|gb|ADN75138.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M V+ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALVILDSCINCD--MCEPECPNAAITMGEEIYEIDPDRCTECVGHYDKPTCISVCPIDC 58 Query: 55 IKPDTEP 61 I+ D E Sbjct: 59 IEVDPEH 65 >gi|302548141|ref|ZP_07300483.1| LOW QUALITY PROTEIN: formate dehydrogenase, iron-sulfur subunit [Streptomyces hygroscopicus ATCC 53653] gi|302465759|gb|EFL28852.1| LOW QUALITY PROTEIN: formate dehydrogenase, iron-sulfur subunit [Streptomyces himastatinicus ATCC 53653] Length = 260 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVD 53 ++ C C H C++VCP + E + + D C CG C P CP Sbjct: 102 SDVCKHCTHAACLDVCPTGSLFRTEFGTVVVQEDICNGCGYCVPACPYG 150 >gi|289192298|ref|YP_003458239.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] gi|288938748|gb|ADC69503.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus sp. FS406-22] Length = 657 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 20/79 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE-----GENF-------------LAIHPDECIDCG 44 YV C C C VCP++ E G I D CI CG Sbjct: 239 YVDENICTGCG--ACAAVCPIEVPNEFDLGLGTRKAIYVPFAQAVPLVYTIDMDHCIRCG 296 Query: 45 VCEPECPVDAIKPDTEPGL 63 +CE C AIK D +P Sbjct: 297 LCEKACGPGAIKYDQKPEE 315 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 6/57 (10%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLA--IHPDECIDCGVCEPECPVDA 54 V + C C C ++CP + E + L ++ C CG C CP A Sbjct: 576 AVVDEDVCGGC--QVCAKMCPYNAITYVEKDGHLVAQVNDVACKGCGACAGACPSGA 630 >gi|255528470|ref|ZP_05395261.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] gi|255507836|gb|EET84285.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Clostridium carboxidivorans P7] Length = 343 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL-ELWL 67 C C C + CP G I+ D+C+ C C C A+ L + + Sbjct: 191 CKGCG--SCAKNCPEKAIVMGS-KAKINKDKCVGCAACMTTCNFGAVSNSWLASLSKSFN 247 Query: 68 KINSEYA 74 + +EYA Sbjct: 248 ERLAEYA 254 >gi|150396121|ref|YP_001326588.1| NADH dehydrogenase subunit I [Sinorhizobium medicae WSM419] gi|150027636|gb|ABR59753.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium medicae WSM419] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 >gi|34556813|ref|NP_906628.1| putative nitrite reductase, formate-dependent, Fe-S centers [Wolinella succinogenes DSM 1740] gi|34482528|emb|CAE09528.1| PUTATIVE NITRITE REDUCTASE, FORMATE-DEPENDENT, FE-S CENTERS [Wolinella succinogenes] Length = 225 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVD 53 +C C+ CV VCP ++ E + ++P++CI C C CP D Sbjct: 95 SCQQCEDAPCVSVCPTKACHKDEQTGIVTMNPEDCIACKYCIVACPYD 142 >gi|146278034|ref|YP_001168193.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17025] gi|145556275|gb|ABP70888.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17025] Length = 167 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 122 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 66 ERCIACKLCEAVCPAQAITIDAEPRED 92 >gi|219667454|ref|YP_002457889.1| NADH dehydrogenase (quinone) [Desulfitobacterium hafniense DCB-2] gi|219537714|gb|ACL19453.1| NADH dehydrogenase (quinone) [Desulfitobacterium hafniense DCB-2] Length = 597 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAI 55 +TY + E C C C CP +C +N I + CI CG C C A+ Sbjct: 540 LTYSIDAEKCKKCGL--CARNCPANCISGNKNTPYVIDGERCIRCGSCMDSCKFGAV 594 >gi|313157716|gb|EFR57127.1| 4Fe-4S binding domain protein [Alistipes sp. HGB5] Length = 384 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN---FLA--IHPDECIDCGVCEPECPV 52 +C C CV+ CP C + E+ F+ + C+ CG+CE CPV Sbjct: 9 DCCGCN--ACVQKCPQQCIGQSEDAEGFIYPQVDKARCVGCGLCEKVCPV 56 >gi|301063959|ref|ZP_07204425.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [delta proteobacterium NaphS2] gi|300441930|gb|EFK06229.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [delta proteobacterium NaphS2] Length = 613 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 7 ENCILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + C H DC+ CP + EG + + I + CI C VC CP +AI P Sbjct: 562 DKCRN--HRDCLNFLACPA-MYLEG-DQVEIDKNTCIGCTVCAQVCPENAIVP 610 >gi|297539218|ref|YP_003674987.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera sp. 301] gi|297258565|gb|ADI30410.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera sp. 301] Length = 83 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP Y+GE I P++C +C C+ CP+D Sbjct: 1 MALMITDECINCDV--CEPECPNGAIYQGEEIYEIDPNKCTECVGHYDKPQCQIVCPIDC 58 Query: 55 I 55 I Sbjct: 59 I 59 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAIYQGEE 29 >gi|260448069|gb|ACX38491.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|315137485|dbj|BAJ44644.1| conserved hypothetical protein [Escherichia coli DH1] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|317047962|ref|YP_004115610.1| electron transport complex, RnfABCDGE type subunit B [Pantoea sp. At-9b] gi|316949579|gb|ADU69054.1| electron transport complex, RnfABCDGE type, B subunit [Pantoea sp. At-9b] Length = 192 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 116 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 163 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 112 IDEANCIGCTKCIQACPVDAI 132 >gi|296123295|ref|YP_003631073.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] gi|296015635|gb|ADG68874.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Planctomyces limnophilus DSM 3776] Length = 594 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAIKP 57 M +V T C C C+ CPV+ + E + F I D+C C C CP + K Sbjct: 133 MQHV-TAACHHCLEPACMTACPVNAY-EKDAFTGIVRHLDDQCFGCQYCTLACPYNVPKY 190 >gi|225181697|ref|ZP_03735136.1| protein of unknown function DUF362 [Dethiobacter alkaliphilus AHT 1] gi|225167568|gb|EEG76380.1| protein of unknown function DUF362 [Dethiobacter alkaliphilus AHT 1] Length = 370 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 ++CI CK C CP E I CI C C+ CP AI+ Sbjct: 313 DSCISCK--ICQHACPAGAITM-EEAAQIEEGACIRCYCCQEMCPEGAIE 359 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 31 NFLAIHP----DECIDCGVCEPECPVDAIKPDTEPGLEL 65 N L HP D CI C +C+ CP AI + +E Sbjct: 302 NQLTAHPKVKVDSCISCKICQHACPAGAITMEEAAQIEE 340 >gi|218887758|ref|YP_002437079.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758712|gb|ACL09611.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 180 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C C CP + + + ++ D CI CG C CPVDAI D E GL Sbjct: 54 CLACNPAPCALACPTGAYVQRKGGGVKVNRDLCIRCGNCAAACPVDAIHLDGETGL 109 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + CI C +C CPVD + +GE L P CI CG C P CP I+ Sbjct: 81 VNRDLCIRCG--NCAAACPVDAIHLDGETGL---PYVCIHCGRCVPFCPHACIE 129 >gi|220917624|ref|YP_002492928.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955478|gb|ACL65862.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 326 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+VCP + E + + + D CI C C CP A Sbjct: 181 CQQCRNPPCVKVCPTQATWKEQDGIVVVDYDWCIGCRCCMSACPYGA 227 >gi|157738050|ref|YP_001490734.1| ferredoxin [Arcobacter butzleri RM4018] gi|315636401|ref|ZP_07891647.1| ferredoxin [Arcobacter butzleri JV22] gi|157699904|gb|ABV68064.1| ferredoxin [Arcobacter butzleri RM4018] gi|315479314|gb|EFU70001.1| ferredoxin [Arcobacter butzleri JV22] Length = 84 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C E CP EG+ I PD C +C C CPVD Sbjct: 1 MSLMITDECIACD--ACREECPNYAIEEGDPIYMIDPDRCTECVGHYEEPQCVEVCPVDC 58 Query: 55 IKPDTEPGL 63 I D + Sbjct: 59 IIIDPDNEE 67 >gi|150400807|ref|YP_001324573.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013510|gb|ABR55961.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 250 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C+ C CVE CP++ E + I C+ CG CE CPV AI+ Sbjct: 195 VDNDVCVKCLV--CVEECPINIIKEIAEGVEIDKSNCMYCGRCEGSCPVHAIE 245 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIK 56 +V ++CI C C CPVD + I PD+C+ C +C CPVD IK Sbjct: 42 IVPDDCIRCNL--CYIECPVDAITKPTVRKPAEIIPDKCVKCEICAMTCPVDTIK 94 Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 ++ E CI C C + CP + E I ++C+ C C CP I D E Sbjct: 127 HIDVEKCIFCGL--CDKFCPTNAITVERRKSFDIDLNKCVGCNACASVCPKKIITVDNEL 184 Query: 62 GLELW 66 G + Sbjct: 185 GELPF 189 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 30/93 (32%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--------------------------NFLAIHP 37 ++ + C+ C+ C CPVD + N I Sbjct: 73 IIPDKCVKCE--ICAMTCPVDTIKVLDANAKIENHSVVYTIKEQDTEHRTIKLNNYHIDV 130 Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 ++CI CG+C+ CP +AI + + + +N Sbjct: 131 EKCIFCGLCDKFCPTNAITVERRKSFD--IDLN 161 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 15/26 (57%), Positives = 19/26 (73%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 E ++ I PD+CI C +C ECPVDAI Sbjct: 37 EKYICIVPDDCIRCNLCYIECPVDAI 62 Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 10/57 (17%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--------FLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C C VCP +++ D C+ C VC ECP++ IK Sbjct: 163 CVGCN--ACASVCPKKIITVDNELGELPFNKSISVDNDVCVKCLVCVEECPINIIKE 217 >gi|317488339|ref|ZP_07946899.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325830747|ref|ZP_08164131.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] gi|316912546|gb|EFV34095.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|325487154|gb|EGC89597.1| putative dimethylsulfoxide reductase, chain B [Eggerthella sp. HGA1] Length = 191 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGL 63 T +C C CV CP ++ ++ H D C+ C C CP A + D + + Sbjct: 55 TVSCNHCDDPACVAGCPTGAMFKSDDGTVQHIDDRCVVCRNCMITCPYGAPQFDEDENM 113 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 17/71 (23%) Query: 5 VTENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGV---------CEPECPVD 53 + + C++C +C+ CP F E EN + +C C C CP+ Sbjct: 86 IDDRCVVC--RNCMITCPYGAPQFDEDENMIV----KCDACKALREDGRNPVCADACPMR 139 Query: 54 AIKPDTEPGLE 64 AI+ L Sbjct: 140 AIEFGDVDELR 150 >gi|315615550|gb|EFU96182.1| NADH-quinone oxidoreductase, chain I family protein [Escherichia coli 3431] Length = 175 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 53 ERCVACNL--CAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 110 Query: 57 PDTEPGLELW 66 + + + Sbjct: 111 LTPDFEMGEY 120 >gi|307721539|ref|YP_003892679.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979632|gb|ADN09667.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfurimonas autotrophica DSM 16294] Length = 366 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CVEVCPV+ + + ++ P EC+ CG C+ CP A D Sbjct: 24 CVEVCPVETIHLENSTISFTPSECVGCGGCDAVCPTAAYTLDD 66 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 14/44 (31%), Gaps = 4/44 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPEC 50 C C C +CP I+ P C+ C C C Sbjct: 260 CTNC--QMCYRICPTGALSSDVRGSVINFNPLACVQCHSCHDVC 301 >gi|289524083|ref|ZP_06440937.1| putative pyruvate formate-lyase-activating enzyme [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502739|gb|EFD23903.1| putative pyruvate formate-lyase-activating enzyme [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 305 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C C VCP+ E + I CI CG C CP DA Sbjct: 61 CMHCG--TCAHVCPMGAI-EFDGIPIIRRSMCIACGSCSAACPSDA 103 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 9/46 (19%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CP+ C G+ + +C+ CG C CP+ AI+ D Sbjct: 35 CPLRCWWCHNPEGIDSGKELMYF-EYKCMHCGTCAHVCPMGAIEFD 79 >gi|254459320|ref|ZP_05072741.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Campylobacterales bacterium GD 1] gi|207083933|gb|EDZ61224.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Campylobacterales bacterium GD 1] Length = 522 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTE 60 +C C +C++ CP + E + +H D CI C C CP + E Sbjct: 88 SCNHCIDPECLKGCPTNSYIKISETGIVVHDDDTCIGCQYCTWNCPYEVPTYHEE 142 >gi|124516667|gb|EAY58175.1| putative ferredoxin [Leptospirillum rubarum] gi|206603573|gb|EDZ40053.1| Putative ferredoxin [Leptospirillum sp. Group II '5-way CG'] Length = 84 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ + +NCI C C+ CP D EG+ I P+ C +C C CP+D Sbjct: 1 MSLKIADNCISCG--ACLPECPNDAISEGDPLYIIDPELCTECVGFHEDPQCAAVCPIDE 58 Query: 55 IKPDTEPGLELWLKINSEYATQWP 78 E ++ ++ A P Sbjct: 59 CCILDPDYQETQEELLAKKARIHP 82 >gi|94264895|ref|ZP_01288669.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] gi|93454665|gb|EAT04933.1| 4Fe-4S ferredoxin, iron-sulfur binding [delta proteobacterium MLMS-1] Length = 226 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIH-PDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C + C CP ++ EN L +H P C+ C C CP DAI ++ Sbjct: 53 CNHCDNAPCTRACPTKAMHKVKENGLTLHEPRRCVGCRACMVSCPYDAITFVRYEPHAMF 112 Query: 67 LKINSEYATQWPNIT 81 + N E P IT Sbjct: 113 KE-NQELV---PGIT 123 >gi|3355643|emb|CAA08780.1| tungsten formylmethanofuran dehydrogenase subunit fwdF [Methanothermobacter wolfeii] Length = 349 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 12/64 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C CP D + I D CI CG+CE CPVDAI+ Sbjct: 113 ETCIQCK--ACETACPQDAITITRELPERKDLVTGEIEIDKDTCIYCGMCEEMCPVDAIE 170 Query: 57 PDTE 60 D + Sbjct: 171 IDHQ 174 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 18/67 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCE 47 V + C+ C C +CPVD E I P+ C++CG C+ Sbjct: 189 VDEDKCVHCG--ICKRICPVDAIMQVCRICPYGEYEIKTPEVTGTSYIDPELCVNCGWCQ 246 Query: 48 PECPVDA 54 CPVDA Sbjct: 247 EICPVDA 253 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 10/57 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF------YEGENFLAIHPDE--CIDCGVCEPECPVDAI 55 + C C+ CV VCP + GE +H DE CI CG CE CPV AI Sbjct: 269 DTCQACE--TCVMVCPCNVLSFPKPEKPGEKTTKLHKDERFCIYCGACERSCPVTAI 323 Score = 41.3 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-----------LAIHPDECIDCGVCEPECPVDAI 55 + CI C C E+CPVD + + D+C+ CG+C+ CPVDAI Sbjct: 152 DTCIYCG--MCEEMCPVDAIEIDHQTPSSASPVVATDIRVDEDKCVHCGICKRICPVDAI 209 Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +Y+ E C+ C C E+CPVD +EGE L I D C C C CP + + Sbjct: 232 SYIDPELCVNCGW--CQEICPVDAATVTKPFEGE--LIIDQDTCQACETCVMVCPCNVLS 287 Query: 57 PDTEP 61 Sbjct: 288 FPKPE 292 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 23/72 (31%), Gaps = 17/72 (23%) Query: 9 CILCKHTDCVEVCPVDC---------FYEGENF------LAIHPDECIDCGVCEPECPVD 53 C+LC C +CP E + I + CI C CE CP D Sbjct: 71 CVLCG--MCSSICPFQALDLQIDGTSIKELAEYPKIIKSAEIDDETCIQCKACETACPQD 128 Query: 54 AIKPDTEPGLEL 65 AI E Sbjct: 129 AITITRELPERK 140 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 11/61 (18%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVD 53 + ++C+ C E+CPV + ++ +AI ++C+ CG+C CP Sbjct: 25 IFQDCLCAVCGLCGEICPVSAIEVNPTGAMVRTEQEKSKIAIDENKCVLCGMCSSICPFQ 84 Query: 54 A 54 A Sbjct: 85 A 85 >gi|74313444|ref|YP_311863.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|209920340|ref|YP_002294424.1| putative oxidoreductase [Escherichia coli SE11] gi|254037929|ref|ZP_04871987.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331643574|ref|ZP_08344705.1| putative electron transport protein YgfS [Escherichia coli H736] gi|331678870|ref|ZP_08379544.1| putative electron transport protein YgfS [Escherichia coli H591] gi|887836|gb|AAA83067.1| ORF_f163 [Escherichia coli] gi|73856921|gb|AAZ89628.1| putative oxidoreductase, Fe-S subunit [Shigella sonnei Ss046] gi|209913599|dbj|BAG78673.1| putative oxidoreductase [Escherichia coli SE11] gi|226839553|gb|EEH71574.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|331037045|gb|EGI09269.1| putative electron transport protein YgfS [Escherichia coli H736] gi|331073700|gb|EGI45021.1| putative electron transport protein YgfS [Escherichia coli H591] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|332799384|ref|YP_004460883.1| NADP-dependent oxidoreductase domain-containing protein [Tepidanaerobacter sp. Re1] gi|332697119|gb|AEE91576.1| NADP-dependent oxidoreductase domain protein [Tepidanaerobacter sp. Re1] Length = 315 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + + C+ C +CV+ C + + ++PD CI CG C CP IK Sbjct: 264 IEDWCVGCG--ECVKHCLYNALHVVNGHSTVNPDACILCGYCSGYCPEFCIK 313 >gi|332280430|ref|ZP_08392843.1| 4Fe-4S binding protein [Shigella sp. D9] gi|332102782|gb|EGJ06128.1| 4Fe-4S binding protein [Shigella sp. D9] Length = 163 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMISIQSLPGD 110 >gi|331655209|ref|ZP_08356208.1| putative electron transport protein YsaA [Escherichia coli M718] gi|331047224|gb|EGI19302.1| putative electron transport protein YsaA [Escherichia coli M718] Length = 159 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 59 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 107 >gi|302389274|ref|YP_003825095.1| electron transport complex, RnfABCDGE type, B subunit [Thermosediminibacter oceani DSM 16646] gi|302199902|gb|ADL07472.1| electron transport complex, RnfABCDGE type, B subunit [Thermosediminibacter oceani DSM 16646] Length = 345 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CI DC +VCPV EN L I ++C CG+C ECP I Sbjct: 144 CIG--FGDCAKVCPVGAITMSENGLPVIDEEKCTGCGLCAKECPKQVI 189 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ +NCI C T C + CPV+ E + ++ + CI C +CE +CP AI Sbjct: 274 VINDNCIGC--TICAKNCPVNAISGEVKKKHEVNAELCIGCSICEEKCPKGAI 324 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 8/69 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E C C CVE CP E A+ D CI C +C CPV+AI + + Sbjct: 246 EKCRNC--MKCVEKCPTKAITSAFAERKKAVINDNCIGCTICAKNCPVNAISGEVKKKH- 302 Query: 65 LWLKINSEY 73 ++N+E Sbjct: 303 ---EVNAEL 308 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI CK C + CP D + N I ++C +C C +CP AI Sbjct: 219 CIACKQ--CEKACPFDAIHVVNNVAIIDYEKCRNCMKCVEKCPTKAI 263 >gi|293453883|ref|ZP_06664302.1| electron transporter HydN [Escherichia coli B088] gi|331679654|ref|ZP_08380324.1| putative electron transport protein YsaA [Escherichia coli H591] gi|291322009|gb|EFE61440.1| electron transporter HydN [Escherichia coli B088] gi|331072826|gb|EGI44151.1| putative electron transport protein YsaA [Escherichia coli H591] Length = 159 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 59 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 107 >gi|312113372|ref|YP_004010968.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodomicrobium vannielii ATCC 17100] gi|311218501|gb|ADP69869.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodomicrobium vannielii ATCC 17100] Length = 249 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C C + CV+VCP F + + + CI C C CP A EP + Sbjct: 112 CQHCANAPCVDVCPTGASFKRADGIVLVDRHICIGCRYCMMACPYKARSFVHEPVADQ 169 >gi|262369576|ref|ZP_06062904.1| ferredoxin [Acinetobacter johnsonii SH046] gi|262315644|gb|EEY96683.1| ferredoxin [Acinetobacter johnsonii SH046] Length = 84 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M +T+ CI C C+ CP +EG+ I C +C C CP+ Sbjct: 1 MALQITDACINCD--MCLPECPNTAIFEGDKIYEIDVSRCTECVGFYDTQTCVDVCPIAC 58 Query: 55 IKPDTEP 61 I+P E Sbjct: 59 IEPHPEH 65 >gi|296808641|ref|XP_002844659.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Arthroderma otae CBS 113480] gi|238844142|gb|EEQ33804.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Arthroderma otae CBS 113480] Length = 231 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 130 ERCIACKL--CEAICPAQAITIEAEERVDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 187 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 188 ESP----------NAEYATETREELLYNKEKLLANGDKWE 217 >gi|222085585|ref|YP_002544115.1| NADH-ubiquinone oxidoreductase chain I protein [Agrobacterium radiobacter K84] gi|221723033|gb|ACM26189.1| NADH-ubiquinone oxidoreductase chain I protein [Agrobacterium radiobacter K84] Length = 165 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 120 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 44 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 86 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 105 CIYCGF--CQEACPVDAIVEGPNF 126 >gi|288819160|ref|YP_003433508.1| fumarate reductase subunit E [Hydrogenobacter thermophilus TK-6] gi|197724767|dbj|BAG70313.1| fumarate reductase, E subunit [Hydrogenobacter thermophilus] gi|288788560|dbj|BAI70307.1| fumarate reductase subunit E [Hydrogenobacter thermophilus TK-6] gi|308752744|gb|ADO46227.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobacter thermophilus TK-6] Length = 183 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 + + NC C+ CV CP + ++ + + CI C C CP AI Sbjct: 52 AFFLPMNCFHCEPAPCVFACPTSAMRKRDDGIVYLQEMLCIGCKACIIACPYGAI 106 >gi|209885060|ref|YP_002288917.1| i subunit of NADH-quinone oxidoreductase [Oligotropha carboxidovorans OM5] gi|226737405|sp|B6JH51|NUOI_OLICO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|209873256|gb|ACI93052.1| i subunit of NADH-quinone oxidoreductase [Oligotropha carboxidovorans OM5] Length = 162 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|91782519|ref|YP_557725.1| ferredoxin [Burkholderia xenovorans LB400] gi|91686473|gb|ABE29673.1| Electron transport complex, RnfABCDGE type, B subunit [Burkholderia xenovorans LB400] Length = 279 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT----EPGL 63 CI C T C++ CPVD + + + C C +C P CPVD I G Sbjct: 89 CIGC--TLCMQACPVDAIVGAPKQMHTVIAELCTGCDLCVPPCPVDCIALPPVTGQATGW 146 Query: 64 ELWLKINSEYATQ 76 W + ++ A + Sbjct: 147 AAWSQAQADAARE 159 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 VIDEQVCIGCTLCMQACPVDAI 104 >gi|85857982|ref|YP_460184.1| iron-sulfur protein associated with hydrogenases [Syntrophus aciditrophicus SB] gi|85721073|gb|ABC76016.1| iron-sulfur protein associated with hydrogenases [Syntrophus aciditrophicus SB] Length = 280 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 Y+ C C C CPVD + + I D+CI CG C CP Sbjct: 199 YIDPGKCQAC--MTCARKCPVDAIISAKGQVHVIDQDKCIKCGTCFEVCP 246 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E I P +C C C +CPVDAI Sbjct: 192 IREAP-TYYIDPGKCQACMTCARKCPVDAI 220 >gi|78187885|ref|YP_375928.1| polysulfide reductase, subunit B, putative [Chlorobium luteolum DSM 273] gi|78167787|gb|ABB24885.1| polysulfide reductase, subunit B, putative [Chlorobium luteolum DSM 273] Length = 199 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 C+ C++T C+ CP + E+ + ++ D CI C C CP DA Sbjct: 60 CMHCENTPCLSACPTGATFMTEDGIVKVNYDRCIGCYACCIACPYDARYAYDRED 114 >gi|7416779|dbj|BAA94028.1| hypothetical electron transfer protein with 4 FeS centers [Rubrivivax gelatinosus] Length = 321 Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C + CV+ CP + E + + + D CI C C CP A + Sbjct: 171 CMQCDNPPCVKACPTKATWKEPDGIVVVDYDWCIGCRYCMTACPYWARHFNWTEPQIPAA 230 Query: 68 KIN 70 + N Sbjct: 231 EFN 233 >gi|332798543|ref|YP_004460042.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696278|gb|AEE90735.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Tepidanaerobacter sp. Re1] Length = 139 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPGL 63 E C+LC + C+ CP + E I + C CG+CE CP AI+ T P + Sbjct: 55 EQCMLCTNPRCIAACPTGALSKDEESGIIKVNKMACTGCGLCEDACPFGAIELHTFPTM 113 >gi|327401724|ref|YP_004342563.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus veneficus SNP6] gi|327317232|gb|AEA47848.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus veneficus SNP6] Length = 756 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C C C CP + ++F + P C CG+C CP +AI+ Sbjct: 561 VDQDLCSAC--RICEAACPHGAI-DVKDFAYVDPAFCQGCGLCMAACPSNAIQ 610 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 32/78 (41%), Gaps = 21/78 (26%) Query: 3 YVVTENCILCKHTDCVEVCPVD------CFY------EGENFLAIHPD------ECIDCG 44 YV CI C C EVCPVD C + E LAI PD EC CG Sbjct: 237 YVDPSRCISCG--KCSEVCPVDVENSFDCGMSKRKAIDKEFKLAI-PDIYNIVEECTKCG 293 Query: 45 VCEPECPVDAIKPDTEPG 62 C CP +AI D E Sbjct: 294 ECVEACPTNAINLDAEEE 311 >gi|260587325|ref|ZP_05853238.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Blautia hansenii DSM 20583] gi|260542192|gb|EEX22761.1| pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein [Blautia hansenii DSM 20583] Length = 879 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C CK + CP++ + + I + C CG C +CP +A D G ++ Sbjct: 734 EKCRGCKICRVEKNCPINVAKVVDGKIVIDENSCNHCGRCIGKCPFNA-FEDYTNGYRIY 792 Query: 67 L 67 + Sbjct: 793 I 793 >gi|225679000|gb|EEH17284.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Paracoccidioides brasiliensis Pb03] Length = 213 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 128 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAI 184 Score = 37.4 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGLE 64 P+ + GE+ L +P + CI C +CE CP AI + E + Sbjct: 109 PISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERED 154 >gi|167622511|ref|YP_001672805.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352533|gb|ABZ75146.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 236 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + E + + +C C C CP DA I +T+ Sbjct: 106 SCQQCKNAPCVTVCPTGAAHRDEKTGIVTMDASKCAGCKYCIAACPYDARFINKETDVAD 165 Query: 64 ELWLKINSEYA 74 +NS+ A Sbjct: 166 NCDFCLNSKLA 176 >gi|124027268|ref|YP_001012588.1| Fe-S cluster-containing hydrogenase component 1 [Hyperthermus butylicus DSM 5456] gi|123977962|gb|ABM80243.1| Fe-S cluster-containing hydrogenase component 1 [Hyperthermus butylicus DSM 5456] Length = 215 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA 54 Y + C+ C++ C VCP Y+ + + + +CI C C CP A Sbjct: 63 PYFI--QCMHCENPPCAAVCPTGATYKTKEGVVMLDHSKCIGCRACVIACPYAA 114 >gi|116747465|ref|YP_844152.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116696529|gb|ABK15717.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1116 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%) Query: 3 YVVT---ENCILCKHTDCVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECPVDA 54 Y V+ C C C++ CP G + + C CG C CP DA Sbjct: 1039 YTVSVDESRCRGCG--RCLQACPYQAISFRKNGLGGSHAVVDEALCKGCGNCISVCPSDA 1096 Query: 55 IKPDTEPGLELWLK 68 D+ +L+L+ Sbjct: 1097 --ADSPYRDQLFLE 1108 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 31 NFLAIHPDECIDCGVCEPECPVDA 54 N + P+ C CG C CP A Sbjct: 102 NPTFVDPERCTLCGRCAEVCPAAA 125 >gi|86157848|ref|YP_464633.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774359|gb|ABC81196.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 243 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C++ CV+ CP + E + + I D CI C C CP A Sbjct: 98 CQQCRNPPCVKACPTQATWKEQDGIVVIDYDWCIGCRCCMSACPYGA 144 >gi|16081628|ref|NP_393993.1| ferredoxin 2[4Fe-4S] related protin [Thermoplasma acidophilum DSM 1728] gi|13124198|sp|P82853|FER2_THEAC RecName: Full=Probable ferredoxin TA0517 gi|10639685|emb|CAC11657.1| ferredoxin 2[4Fe-4S] related protin [Thermoplasma acidophilum] Length = 70 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV +CP D + E + IH ++CI+CG C CP AI + Sbjct: 17 CNYCG--ACVGMCPTDAIWLDETVIKIHEEKCIECGFCIVGCPTGAITAE 64 >gi|294678804|ref|YP_003579419.1| electron transport complex protein RnfB [Rhodobacter capsulatus SB 1003] gi|17380288|sp|Q07394|RNFB_RHOCA RecName: Full=Electron transport complex protein rnfB; AltName: Full=Nitrogen fixation protein rnfB gi|216928|dbj|BAA02787.1| ORFU3 product, potential iron-sulfur protein [Rhodobacter capsulatus] gi|435526|emb|CAA51400.1| rnfB [Rhodobacter capsulatus] gi|1905809|emb|CAA72669.1| RnfB protein [Rhodobacter capsulatus] gi|294477624|gb|ADE87012.1| electron transport complex protein RnfB [Rhodobacter capsulatus SB 1003] gi|742356|prf||2009377C rnfB protein Length = 187 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 +V ++C C C + CP D G + + D CI C C CP +AI + Sbjct: 105 AFVFEDHCTGC--QKCFKRCPTDAIVGGAKQIHTVVMDACIGCDACIEVCPTEAIVSRVK 162 Query: 61 P 61 P Sbjct: 163 P 163 >gi|327310272|ref|YP_004337169.1| putative ATPase RIL [Thermoproteus uzoniensis 768-20] gi|326946751|gb|AEA11857.1| putative ATPase RIL [Thermoproteus uzoniensis 768-20] Length = 588 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 7 ENC--ILCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++C C H +C++ CPV+ E I CI CG+C +CP AI Sbjct: 9 DSCDPKKCGH-ECIKYCPVNKSGKVIWIDENTGKAVISEKLCIGCGICVHKCPFSAI 64 >gi|297519363|ref|ZP_06937749.1| putative oxidoreductase Fe-S binding subunit [Escherichia coli OP50] Length = 314 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C C + CV CPV+ + + + +CI C C CP ++ + Sbjct: 55 ACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQK 111 >gi|326790371|ref|YP_004308192.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium lentocellum DSM 5427] gi|326541135|gb|ADZ82994.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Clostridium lentocellum DSM 5427] Length = 575 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E CI C C+++ CP +GE ++I+ C CG+C CP AI + + Sbjct: 525 ETCIKCG--MCLKLGCP--AICKGEEGISINTALCAGCGLCASVCPKQAISKEVK 575 >gi|260892089|ref|YP_003238186.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ammonifex degensii KC4] gi|260864230|gb|ACX51336.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ammonifex degensii KC4] Length = 591 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIK 56 E C C C+E+ CP + + I P C+ CG+C CP A++ Sbjct: 536 EVCRGCGL--CLELGCPALALKDRSRRKIVIDPLLCVGCGLCAQVCPFGALE 585 >gi|227821627|ref|YP_002825597.1| NADH dehydrogenase subunit I [Sinorhizobium fredii NGR234] gi|227340626|gb|ACP24844.1| NADH dehydrogenase, chain I [Sinorhizobium fredii NGR234] Length = 163 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|254491636|ref|ZP_05104815.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Methylophaga thiooxidans DMS010] gi|224463114|gb|EEF79384.1| electron transport complex, RnfABCDGE type, B subunit subfamily [Methylophaga thiooxydans DMS010] Length = 172 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + DEC C +C CPVD I Sbjct: 97 DRCIGC--TLCIQACPVDAILGAAKHMHTVIADECTGCELCVEPCPVDCI 144 Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 24 DCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 +C E L I D CI C +C CPVDAI Sbjct: 82 ECGVEKPKTLAVIDEDRCIGCTLCIQACPVDAI 114 Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C+ CVE CPVDC Sbjct: 121 MHTVIADECTGCEL--CVEPCPVDCI 144 >gi|157374544|ref|YP_001473144.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316918|gb|ABV36016.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 205 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + + +C C H CV+ CP ++ + + I C+ C C CP DA + D+ Sbjct: 63 AHYTSISCNHCSHPVCVKACPTGACHKRKSDGLVHIEASLCVGCQSCSRACPYDAPQFDS 122 Query: 60 EPG 62 E G Sbjct: 123 ERG 125 >gi|148978911|ref|ZP_01815231.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrionales bacterium SWAT-3] gi|145962109|gb|EDK27395.1| anaerobic dimethyl sulfoxide reductase chain B [Vibrionales bacterium SWAT-3] Length = 213 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 +Y ++ C C + CV+VCP + + + + CI C C CP + + Sbjct: 60 SYYLSIACNHCTNPACVKVCPSGAMRKRDEDGLVVVDESVCIGCQHCSNACPYGVPQYNA 119 Query: 60 EPGL 63 + G Sbjct: 120 KKGH 123 >gi|114327958|ref|YP_745115.1| NADH dehydrogenase subunit I [Granulibacter bethesdensis CGDNIH1] gi|122327080|sp|Q0BSL0|NUOI_GRABC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|114316132|gb|ABI62192.1| NADH-quinone oxidoreductase chain I [Granulibacter bethesdensis CGDNIH1] Length = 162 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPALAITIEAEPRADGSRRTTRYDIDMTKCIYCGLCEEACPVDAI 117 >gi|57640225|ref|YP_182703.1| pyruvate-formate lyase-activating enzyme [Thermococcus kodakarensis KOD1] gi|57158549|dbj|BAD84479.1| pyruvate-formate lyase-activating enzyme [Thermococcus kodakarensis KOD1] Length = 306 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CI C CV VCP+ EN + I ++C CGVC CP A+K Sbjct: 58 CIHC--HTCVNVCPLRAITFDENEVQHIDREKCDVCGVCAEFCPTSALK 104 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 9/51 (17%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP+ C + + +CI C C CP+ AI D Sbjct: 32 CPLRCWWCHNPEGISPRPQLMYL-EYKCIHCHTCVNVCPLRAITFDENEVQ 81 >gi|13471398|ref|NP_102964.1| NADH dehydrogenase subunit I [Mesorhizobium loti MAFF303099] gi|75543506|sp|Q98KR4|NUOI_RHILO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|14022140|dbj|BAB48750.1| NADH-ubiquinone dehydrogenase chain 9 [Mesorhizobium loti MAFF303099] Length = 164 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 119 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 120 VEGPNFEFATETREELYYDKDKLLA 144 >gi|88797367|ref|ZP_01112957.1| pyridine nucleotide-disulphide oxidoreductase family protein [Reinekea sp. MED297] gi|88780236|gb|EAR11421.1| pyridine nucleotide-disulphide oxidoreductase family protein [Reinekea sp. MED297] Length = 547 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 21/72 (29%), Gaps = 8/72 (11%) Query: 2 TYVVTENCILCKHT----DCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C C CP I D C CG C +CP AI Sbjct: 474 AHFEASRCYSCGTCFECDGCFGACPEQAITILGTGLGYRIDYDRCTGCGACVLQCPTHAI 533 Query: 56 --KPDTEPGLEL 65 P TE E Sbjct: 534 SLFPVTELEQED 545 >gi|191166000|ref|ZP_03027836.1| 4Fe-4S binding protein [Escherichia coli B7A] gi|256019317|ref|ZP_05433182.1| putative oxidoreductase [Shigella sp. D9] gi|309793956|ref|ZP_07688381.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|190903948|gb|EDV63661.1| 4Fe-4S binding protein [Escherichia coli B7A] gi|308122363|gb|EFO59625.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] Length = 162 Score = 50.5 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMISIQSLPGD 109 >gi|320169962|gb|EFW46861.1| ATP-binding cassette sub-family E member 1 [Capsaspora owczarzaki ATCC 30864] Length = 602 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 11/56 (19%) Query: 11 LCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 CK C + C C + I + CI CG+C +CP +AI Sbjct: 17 KCKPKKCRQECKKSCPVVRMGKLCIEVAPTDKISYISEELCIGCGICVKKCPFEAI 72 >gi|304314561|ref|YP_003849708.1| energy-converting hydrogenase A, subunit Q [Methanothermobacter marburgensis str. Marburg] gi|302588020|gb|ADL58395.1| energy-converting hydrogenase A, subunit Q [Methanothermobacter marburgensis str. Marburg] Length = 407 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CV C + + I D+C+ CG C CP +AIK Sbjct: 53 CRGCG--ACVSACRTGAIHLTSSGKTGVHSEIDEDKCVRCGYCARACPTEAIKY 104 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +V+ + C CV CPVD + + D CI CG C+ CPV A+K + E Sbjct: 351 HVICQRC-----GVCVNHCPVDAMAMDGE-VEVDDDTCILCGECQDICPVTAVKLNLEDD 404 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ E CI C CV CPV D C+ CG C CPVDA++ Sbjct: 269 VLEERCIGCGL--CVTECPVGVIEPVTPAPVEIKDGCVFCGRCRGVCPVDAVE 319 Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 10/76 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 + + C C C E CP D EN I+P C CG C C AI Sbjct: 12 IDDRCFGC--VLCREACPYDAIRMKTILGEPVRENVPVINPRICRGCGACVSACRTGAIH 69 Query: 57 PDTEPGLELWLKINSE 72 + + +I+ + Sbjct: 70 LTSSGKTGVHSEIDED 85 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 2 TYVVTE-NCILCKHTDCVEVCP-VDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKP 57 VV + +CI C C VCP G I P C C C CP AIK Sbjct: 117 AVVVNQRDCIGC--MTCTRVCPSRGAIKVGKINRLPYIDPSYCARCEECMDVCPSAAIKY 174 Query: 58 DTEP-GLELWLKIN 70 + E + K+N Sbjct: 175 SSRKRAYENFSKLN 188 Score = 40.1 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPV-DAIK 56 + C+ C + C CP + GE + ++ +CI C C CP AIK Sbjct: 85 DKCVRCGY--CARACPTEAIKYGEILPRSVVGGKAVVVNQRDCIGCMTCTRVCPSRGAIK 142 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI CG+C ECPV I+P T +E Sbjct: 272 ERCIGCGLCVTECPVGVIEPVTPAPVE 298 Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 26/80 (32%), Gaps = 24/80 (30%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL----------------------AIHPDECID 42 + + C+ C C VCPVD E + C Sbjct: 299 IKDGCVFCG--RCRGVCPVDAVEITEEGFRASDGRIYLERRILRGPRSGSVEVDHVICQR 356 Query: 43 CGVCEPECPVDAIKPDTEPG 62 CGVC CPVDA+ D E Sbjct: 357 CGVCVNHCPVDAMAMDGEVE 376 >gi|295106701|emb|CBL04244.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 202 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 +T +C C++ C +VCPV Y+ + D+CI C +C CP Sbjct: 56 ITVSCQHCENPACAKVCPVGATYKDPETGVVRQDYDKCIGCRMCMSACPYT 106 >gi|262037146|ref|ZP_06010638.1| electron transport complex protein RnfC [Leptotrichia goodfellowii F0264] gi|261748834|gb|EEY36181.1| electron transport complex protein RnfC [Leptotrichia goodfellowii F0264] Length = 441 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 12/54 (22%) Query: 8 NCILCKHTDCVEVCPV--------DCFYEGE-NFLA-IHPDECIDCGVCEPECP 51 NCI C + CV+ CP+ + + +G+ L ++ D CI+CG CE CP Sbjct: 364 NCISCGY--CVDACPMGLMPMKFEEMYRKGKYKKLVKLNLDMCIECGACEYSCP 415 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 35 IHPDECIDCGVCEPECPVD 53 I + CI CG C CP+ Sbjct: 360 IERNNCISCGYCVDACPMG 378 >gi|154419790|ref|XP_001582911.1| hypothetical protein [Trichomonas vaginalis G3] gi|121917149|gb|EAY21925.1| hypothetical protein TVAG_249850 [Trichomonas vaginalis G3] Length = 599 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCI--LCKHTDCVEVCPVD-----CFYEGENFLAIHPDECIDCGVCEPECPVD 53 + V + C C+ +C VCPV+ C AI CI CG+C +CP Sbjct: 8 LAVVNADRCKPKKCQ-KECKGVCPVNRSGKNCIKVPVTGCAISEALCIGCGMCVKKCPFH 66 Query: 54 AIK 56 AI+ Sbjct: 67 AIQ 69 >gi|83718953|ref|YP_441525.1| ferredoxin [Burkholderia thailandensis E264] gi|257139787|ref|ZP_05588049.1| ferredoxin [Burkholderia thailandensis E264] gi|83652778|gb|ABC36841.1| iron-sulfur cluster-binding protein [Burkholderia thailandensis E264] Length = 282 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + I + C C +C P CPVD I Sbjct: 85 QLCIGC--TLCMQACPVDAIVGAPKQMHTIVAELCTGCDLCVPPCPVDCI 132 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 82 IDEQLCIGCTLCMQACPVDAI 102 >gi|73666986|ref|YP_303002.1| NADH dehydrogenase subunit I [Ehrlichia canis str. Jake] gi|115502528|sp|Q3YSA1|NUOI_EHRCJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|72394127|gb|AAZ68404.1| NADH dehydrogenase subunit I [Ehrlichia canis str. Jake] Length = 167 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAICPAQAITIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 122 Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 107 CIYCGF--CQEACPVDAIVEGPNFEY 130 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 66 ERCIACKLCEAICPAQAITIEAQERDD 92 >gi|70733154|ref|YP_262927.1| ferredoxin, 4Fe-4S [Pseudomonas fluorescens Pf-5] gi|68347453|gb|AAY95059.1| ferredoxin, 4Fe-4S [Pseudomonas fluorescens Pf-5] Length = 83 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPNITTK 83 I P E + E ++ IT K Sbjct: 59 I-----PLDEARPETEEELMAKYRKITGK 82 >gi|11498235|ref|NP_069461.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] gi|2649992|gb|AAB90612.1| iron-sulfur cluster binding protein [Archaeoglobus fulgidus DSM 4304] Length = 340 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + YV + CI C C E CP + E+ + ++C CGVC C +AIK Sbjct: 276 LAYVDEDMCIACGV--CEERCPFEAITL-EDVAKVDEEKCFGCGVCVVGCEQEAIK 328 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 22 PVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDT 59 P++ E +L + D CI CGVCE CP +AI + Sbjct: 265 PIESLLEKSRYLAYVDEDMCIACGVCEERCPFEAITLED 303 >gi|13541408|ref|NP_111096.1| indolepyruvate:ferredoxin oxidoreductase, alpha and beta subunits [Thermoplasma volcanium GSS1] gi|14324791|dbj|BAB59718.1| indolpyruvate ferredoxin oxidoreductase [IOR] alpha subunit [Thermoplasma volcanium GSS1] Length = 604 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C CP N A D CI CG C CP +AIK + W Sbjct: 542 EKCTGCSICYDFFTCP--SILPLSNKKAFIDDSCIGCGACVEVCPFNAIKVKGNAP-KGW 598 Query: 67 LK 68 ++ Sbjct: 599 IE 600 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY 27 + ++CI C CVEVCP + Sbjct: 568 FIDDSCIGCG--ACVEVCPFNAIK 589 >gi|328783520|ref|XP_003250306.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform 1 [Apis mellifera] Length = 175 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 74 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 130 Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 74 ERCIACKLCEAICPAQAITIEAEERAD 100 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 115 CIYCGF--CQEACPVDAIVEGPNF 136 >gi|212223426|ref|YP_002306662.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] gi|212008383|gb|ACJ15765.1| Oxidoreductase iron-sulfur protein [Thermococcus onnurineus NA1] Length = 165 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 V NC C+ C+EVCPV+ + ++ + + P +CI C +C CP K D Sbjct: 42 VAFNCRHCEKAPCMEVCPVNALSKDDDGAVVLDPLKCIGCLMCGLACPFGIPKIDE 97 >gi|87306374|ref|ZP_01088521.1| NADH dehydrogenase subunit I [Blastopirellula marina DSM 3645] gi|87290553|gb|EAQ82440.1| NADH dehydrogenase subunit I [Blastopirellula marina DSM 3645] Length = 175 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 13/74 (17%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-----------IHPDECIDCGVCEPECPVDAIKP 57 CI C C + CPVDC Y G+ + I +C+ C +C CPVD I Sbjct: 65 CIACDQ--CAKACPVDCIYIGKERVEGAKGFAVTGFTIDYTKCMFCALCVEPCPVDCIFM 122 Query: 58 DTEPGLELWLKINS 71 L + + + Sbjct: 123 GGTLDLSSYSRDGA 136 >gi|89109665|ref|AP_003445.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. W3110] gi|90111508|ref|NP_417362.4| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. MG1655] gi|157154983|ref|YP_001464223.1| 4Fe-4S binding protein [Escherichia coli E24377A] gi|170018868|ref|YP_001723822.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|170680835|ref|YP_001745038.1| 4Fe-4S binding protein [Escherichia coli SMS-3-5] gi|193063562|ref|ZP_03044651.1| 4Fe-4S binding protein [Escherichia coli E22] gi|194426426|ref|ZP_03058981.1| 4Fe-4S binding protein [Escherichia coli B171] gi|218555434|ref|YP_002388347.1| putative oxidoreductase [Escherichia coli IAI1] gi|218696481|ref|YP_002404148.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli 55989] gi|238902011|ref|YP_002927807.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BW2952] gi|256024605|ref|ZP_05438470.1| putative oxidoreductase [Escherichia sp. 4_1_40B] gi|260845553|ref|YP_003223331.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O103:H2 str. 12009] gi|260857008|ref|YP_003230899.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O26:H11 str. 11368] gi|260869562|ref|YP_003235964.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O111:H- str. 11128] gi|293449208|ref|ZP_06663629.1| oxidoreductase [Escherichia coli B088] gi|300815664|ref|ZP_07095888.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300820688|ref|ZP_07100839.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300906566|ref|ZP_07124257.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300947605|ref|ZP_07161777.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300954276|ref|ZP_07166739.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|301027818|ref|ZP_07191123.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|301303042|ref|ZP_07209169.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|301327285|ref|ZP_07220541.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|301643766|ref|ZP_07243804.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|307139572|ref|ZP_07498928.1| putative oxidoreductase [Escherichia coli H736] gi|307310496|ref|ZP_07590144.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|331669619|ref|ZP_08370465.1| putative electron transport protein YgfS [Escherichia coli TA271] gi|331684510|ref|ZP_08385102.1| putative electron transport protein YgfS [Escherichia coli H299] gi|6920085|sp|Q46819|YGFS_ECOLI RecName: Full=Putative electron transport protein ygfS gi|85675698|dbj|BAE76951.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K12 substr. W3110] gi|87082179|gb|AAC75924.2| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli str. K-12 substr. MG1655] gi|157077013|gb|ABV16721.1| 4Fe-4S binding protein [Escherichia coli E24377A] gi|169753796|gb|ACA76495.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|170518553|gb|ACB16731.1| 4Fe-4S binding protein [Escherichia coli SMS-3-5] gi|192930839|gb|EDV83444.1| 4Fe-4S binding protein [Escherichia coli E22] gi|194415734|gb|EDX32001.1| 4Fe-4S binding protein [Escherichia coli B171] gi|218353213|emb|CAU99126.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli 55989] gi|218362202|emb|CAQ99820.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli IAI1] gi|238862761|gb|ACR64759.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BW2952] gi|257755657|dbj|BAI27159.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O26:H11 str. 11368] gi|257760700|dbj|BAI32197.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O103:H2 str. 12009] gi|257765918|dbj|BAI37413.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O111:H- str. 11128] gi|291322298|gb|EFE61727.1| oxidoreductase [Escherichia coli B088] gi|299879080|gb|EFI87291.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|300318737|gb|EFJ68521.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300401605|gb|EFJ85143.1| 4Fe-4S binding domain protein [Escherichia coli MS 84-1] gi|300452802|gb|EFK16422.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300526952|gb|EFK48021.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300531593|gb|EFK52655.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300841706|gb|EFK69466.1| 4Fe-4S binding domain protein [Escherichia coli MS 124-1] gi|300846148|gb|EFK73908.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|301077865|gb|EFK92671.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|306909391|gb|EFN39886.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|309703246|emb|CBJ02581.1| putative oxidoreductase, 4Fe-4S subunit [Escherichia coli ETEC H10407] gi|315062189|gb|ADT76516.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli W] gi|315256767|gb|EFU36735.1| 4Fe-4S binding domain protein [Escherichia coli MS 85-1] gi|315614960|gb|EFU95598.1| hydrogenase-4 component A [Escherichia coli 3431] gi|320202544|gb|EFW77114.1| putative oxidoreductase, Fe-S subunit [Escherichia coli EC4100B] gi|323154765|gb|EFZ40963.1| hydrogenase-4 component A [Escherichia coli EPECa14] gi|323162525|gb|EFZ48375.1| hydrogenase-4 component A [Escherichia coli E128010] gi|323167911|gb|EFZ53601.1| hydrogenase-4 component A [Shigella sonnei 53G] gi|323173882|gb|EFZ59511.1| hydrogenase-4 component A [Escherichia coli LT-68] gi|323180328|gb|EFZ65880.1| hydrogenase-4 component A [Escherichia coli 1180] gi|323183438|gb|EFZ68835.1| hydrogenase-4 component A [Escherichia coli 1357] gi|323377227|gb|ADX49495.1| putative oxidoreductase, Fe-S subunit [Escherichia coli KO11] gi|323935883|gb|EGB32182.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323941594|gb|EGB37774.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323946629|gb|EGB42652.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324119926|gb|EGC13805.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|331063287|gb|EGI35200.1| putative electron transport protein YgfS [Escherichia coli TA271] gi|331078125|gb|EGI49331.1| putative electron transport protein YgfS [Escherichia coli H299] Length = 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|323478558|gb|ADX83796.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus HVE10/4] Length = 285 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 95 YNIPINCFHCVNAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 147 >gi|306816073|ref|ZP_07450211.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli NC101] gi|305850469|gb|EFM50926.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli NC101] Length = 155 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAME 105 >gi|220924013|ref|YP_002499315.1| NADH dehydrogenase subunit I [Methylobacterium nodulans ORS 2060] gi|254772594|sp|B8IUV4|NUOI_METNO RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|219948620|gb|ACL59012.1| NADH-quinone oxidoreductase, chain I [Methylobacterium nodulans ORS 2060] Length = 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + P Sbjct: 60 ERCIACKLCEAICPAQAITIEAGP 83 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|157963137|ref|YP_001503171.1| cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella pealeana ATCC 700345] gi|157848137|gb|ABV88636.1| Cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella pealeana ATCC 700345] Length = 488 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 + +C+ C CVEVCP ECIDCG C C Sbjct: 284 ILGDCVDCNL--CVEVCPTGIDIRNGLQY-----ECIDCGACVDAC 322 >gi|126090183|ref|YP_001041664.1| electron transport complex protein RnfB [Shewanella baltica OS155] gi|126174476|ref|YP_001050625.1| electron transport complex protein RnfB [Shewanella baltica OS155] gi|125997681|gb|ABN61756.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella baltica OS155] gi|125999839|gb|ABN63909.1| hypothetical protein Sbal_4546 [Shewanella baltica OS155] Length = 199 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + +C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIIGAGKLMHTVLTTDCTGCDLCVEPCPVDCI 159 >gi|325661153|ref|ZP_08149780.1| hypothetical protein HMPREF0490_00513 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472660|gb|EGC75871.1| hypothetical protein HMPREF0490_00513 [Lachnospiraceae bacterium 4_1_37FAA] Length = 263 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 V + CI C C +VCP D N I P++C +CG C +CP Sbjct: 213 VCSTGCIGC--RMCQKVCPADAIVVENNLAWIDPEKCTNCGACAEKCP 258 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CV+ CP D + + + + C CG C CP + I+ Sbjct: 145 CGFGTCVKACPFDAIHIVDGVAVVDKEACKACGKCIKACPKNLIE 189 Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGV 45 V E C C C++ CP + +G++ +A+ CI C + Sbjct: 166 AVVDKEACKACG--KCIKACPKNLIELVPYEAKHLVQCSSKEKGKDVMAVCSTGCIGCRM 223 Query: 46 CEPECPVDAIKPDTEPGL 63 C+ CP DAI + Sbjct: 224 CQKVCPADAIVVENNLAW 241 >gi|325981158|ref|YP_004293560.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Nitrosomonas sp. AL212] gi|325530677|gb|ADZ25398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Nitrosomonas sp. AL212] Length = 86 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +GE I P C +C C CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAISQGEEIYQIDPSLCTECVGHYNEPQCIEVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNGAISQGEE 29 >gi|257792114|ref|YP_003182720.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257476011|gb|ACV56331.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 207 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 M Y +T C C++ C +VCPV Y+ + D+CI C +C CP Sbjct: 58 MRY-ITVGCQHCENPTCTKVCPVGATYKDPETGVVRQDYDKCIGCRMCMAACPYT 111 >gi|255593643|ref|XP_002535919.1| Ferredoxin, putative [Ricinus communis] gi|223521533|gb|EEF26466.1| Ferredoxin, putative [Ricinus communis] Length = 83 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C C VCP + +G I+PD C +C C+ CP+ Sbjct: 1 MALFITDECINCDV--CEPVCPNEAISQGAEIYEINPDLCTECVGHYDKPQCQQVCPISC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPLDPD 64 >gi|158340815|ref|YP_001521983.1| nitroreductase family protein, putative [Acaryochloris marina MBIC11017] gi|158311056|gb|ABW32669.1| nitroreductase family protein, putative [Acaryochloris marina MBIC11017] Length = 290 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 21/81 (25%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAI----HPDECIDCGVCEPECPVDA------- 54 E C C CV++CP + AI CI+CG C CP +A Sbjct: 8 AERCQKCG--KCVQICPT--IFAQHTKGAIPHLLDTTRCIECGHCVAICPSEAISHSSFP 63 Query: 55 ------IKPDTEPGLELWLKI 69 I+P+ P ++++ Sbjct: 64 SGTIAPIQPEQLPDTAQFMEL 84 >gi|54024629|ref|YP_118871.1| NADH dehydrogenase subunit H [Nocardia farcinica IFM 10152] gi|81680061|sp|Q5YWD4|NUOHI_NOCFA RecName: Full=NADH-quinone oxidoreductase subunits H/I; AltName: Full=NADH dehydrogenase I subunits H/I; AltName: Full=NDH-1 subunit H/I gi|54016137|dbj|BAD57507.1| putative NADH dehydrogenase I chain H [Nocardia farcinica IFM 10152] Length = 597 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 25/111 (22%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGEN---------------FLAIHPDECIDCGVCEPEC 50 E CI C+ C CP D Y EG + I+ CI CG+C C Sbjct: 463 EKCIGCEL--CAWACPADAIYVEGADNTEDERYSPGERYGRVYQINYLRCIGCGLCIEAC 520 Query: 51 PVDAIKP--DTEPGLELWLKI----NSEYATQWPNITTKKESL-PSAAKMD 94 P A+ D E + + + A P + ++ P + D Sbjct: 521 PTRALTMTNDYELTDDNRADLIYEKDRLLAPLAPGMVAPPPAMAPGTTEAD 571 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%) Query: 22 PVDCFYEGENFLAIHPD---ECIDCGVCEPECPVDAIKPD--TEPGLELW 66 P Y G + L HPD +CI C +C CP DAI + E + Sbjct: 444 PTAPRYHGRHQLNRHPDGLEKCIGCELCAWACPADAIYVEGADNTEDERY 493 >gi|114566722|ref|YP_753876.1| thiamine pyrophosphate enzyme [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337657|gb|ABI68505.1| thiamine pyrophosphate enzyme [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 580 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV E C CK C+++ C + E + I+P+ C+ CG+C C DAIK Sbjct: 524 YVDPELCKSCKL--CIKIGCTGIYWVEEDRKAVINPNTCVACGLCPQVCTFDAIK 576 >gi|331083627|ref|ZP_08332738.1| hypothetical protein HMPREF0992_01662 [Lachnospiraceae bacterium 6_1_63FAA] gi|330403838|gb|EGG83390.1| hypothetical protein HMPREF0992_01662 [Lachnospiraceae bacterium 6_1_63FAA] Length = 860 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C CK + CP++ + + I + C CG C +CP +A D G ++ Sbjct: 715 EKCRGCKICRVEKNCPINVAKVVDGKIVIDENSCNHCGRCIGKCPFNA-FEDYTNGYRIY 773 Query: 67 L 67 + Sbjct: 774 I 774 >gi|224371395|ref|YP_002605559.1| 4Fe-4S iron-sulfur binding protein (ferredoxin) [Desulfobacterium autotrophicum HRM2] gi|223694112|gb|ACN17395.1| 4Fe-4S iron-sulfur binding protein (ferredoxin) [Desulfobacterium autotrophicum HRM2] Length = 273 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI CK C EVCP+ + ++ I CI C C +CPV A D E L Sbjct: 201 DCIDCKL--CSEVCPMGSI-DSDDVSKIT-GICIKCCACVKKCPVGAKYFDDENYLRHKH 256 Query: 68 KI 69 ++ Sbjct: 257 EL 258 >gi|158319328|ref|YP_001511835.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] gi|158139527|gb|ABW17839.1| NADH dehydrogenase (quinone) [Alkaliphilus oremlandii OhILAs] Length = 582 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E CI C C CPV+ E + +I+ + CI CG C C A+ D Sbjct: 532 EKCIGCGL--CRRNCPVEAISGETKKVHSINQELCIQCGKCYEVCKFGAVIVD 582 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 18/26 (69%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I ++CI CG+C CPV+AI +T+ Sbjct: 529 ILDEKCIGCGLCRRNCPVEAISGETK 554 >gi|317489347|ref|ZP_07947861.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] gi|316911592|gb|EFV33187.1| dimethylsulfoxide reductase [Eggerthella sp. 1_3_56FAA] Length = 190 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +C C + +CV VCP Y+ ++ + + +CI C C CP DT Sbjct: 53 YYLPVSCQHCDNPECVSVCPTGASYKRDDGVVLVDHSKCIGCQYCVMACPYGVRAYDTSK 112 Query: 62 G 62 Sbjct: 113 D 113 >gi|302872534|ref|YP_003841170.1| hypothetical protein COB47_1916 [Caldicellulosiruptor obsidiansis OB47] gi|302575393|gb|ADL43184.1| protein of unknown function DUF362 [Caldicellulosiruptor obsidiansis OB47] Length = 375 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNACPAQAIEMRSRKAYVDLKKCIKCYCCHELCPAKAIK 363 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + CI C C CP AI+ Sbjct: 312 VFDRNICIGCAECFNACPAQAIE 334 >gi|288942194|ref|YP_003444434.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Allochromatium vinosum DSM 180] gi|288897566|gb|ADC63402.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Allochromatium vinosum DSM 180] Length = 240 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +C+ C+ CV VCP Y+ + + + D+CI C C CP A + D + Sbjct: 72 SCLHCEEPPCVPVCPTGASYKRPDNGVVLVDYDKCIGCKYCSWACPYGARELDAQQ 127 >gi|239502912|ref|ZP_04662222.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii AB900] gi|260554429|ref|ZP_05826650.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|260410971|gb|EEX04268.1| ferredoxin [Acinetobacter baumannii ATCC 19606] Length = 87 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I P C +C C+ CP+D Sbjct: 1 MALLITSDCINCD--MCLPECPNTAIFEGSKVYEIDPLRCTECVGFYAAPTCKEVCPIDC 58 Query: 55 IKPD 58 IK D Sbjct: 59 IKQD 62 >gi|226327874|ref|ZP_03803392.1| hypothetical protein PROPEN_01755 [Proteus penneri ATCC 35198] gi|225203578|gb|EEG85932.1| hypothetical protein PROPEN_01755 [Proteus penneri ATCC 35198] Length = 180 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP A++ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTALQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|298530405|ref|ZP_07017807.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509779|gb|EFI33683.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 280 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 +C+ C C CP Y+ E L ++C+ CG C CP Sbjct: 89 SCMQCIRPSCARACPTGATYKDEFGLVSFDSEKCMACGYCVDACPFQ 135 Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-------IHPDECIDCGVCEPECPVDAIKP 57 +E C+ C + CV+ CP E F I+ C CG C CP +A+ Sbjct: 119 SEKCMACGY--CVDACPFQHP-ELSRFTYFSLRNVWIN--RCTACGACAQACPENALFF 172 >gi|206901578|ref|YP_002250818.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] gi|206740681|gb|ACI19739.1| iron-sulfur cluster-binding protein [Dictyoglomus thermophilum H-6-12] Length = 266 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECP 51 DCV+VCP D Y GE+ L I ++C CG+C CP Sbjct: 144 GFGDCVKVCPFDAIYMGEDGLPKIDIEKCTGCGLCVKACP 183 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V ++ CI C C +VCP F I + C CG+C +CP A Sbjct: 212 VCSKACIGCG--ICEKVCPKGAIKMDGRFPVIDYNLCDGCGICVEKCPTKA 260 Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 18/68 (26%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCEPEC 50 E C C CV+ CP G + CI CG+CE C Sbjct: 170 EKCTGCGL--CVKACPRGILTLLPINIPLLLGCRSELPGPEARKVCSKACIGCGICEKVC 227 Query: 51 PVDAIKPD 58 P AIK D Sbjct: 228 PKGAIKMD 235 >gi|330813990|ref|YP_004358229.1| NADH-ubiquinone oxidoreductase chain I [Candidatus Pelagibacter sp. IMCC9063] gi|327487085|gb|AEA81490.1| NADH-ubiquinone oxidoreductase chain I [Candidatus Pelagibacter sp. IMCC9063] Length = 161 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAISIDAELKEDGSRKTTRYDIDMVKCIYCGLCQEACPVDAI 116 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D E + Sbjct: 60 ERCIACKLCEAVCPAQAISIDAELKED 86 >gi|284161887|ref|YP_003400510.1| methyl-viologen-reducing hydrogenase subunit delta [Archaeoglobus profundus DSM 5631] gi|284011884|gb|ADB57837.1| methyl-viologen-reducing hydrogenase delta subunit [Archaeoglobus profundus DSM 5631] Length = 734 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Query: 3 YVVT--ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 Y +T E C C C VCP + E + I P C CG+C CP AIK Sbjct: 534 YSITDIEKCSKCGL--CYAVCPHNAI-EFDEVFKIDPAFCKGCGLCYATCPSRAIKLVNL 590 Query: 61 PGLE 64 + Sbjct: 591 EDEQ 594 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 19/77 (24%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFL----AIHPD-------------ECIDCGV 45 Y+ + C+ C C EVCP++ + + AI D C CG Sbjct: 229 YIDPDKCVSCG--KCSEVCPIEVPNPFDFGMTKRKAIDKDFRLAMPDTYNIVEGCNRCGE 286 Query: 46 CEPECPVDAIKPDTEPG 62 C CP +AI D + Sbjct: 287 CVKVCPTNAINLDAKAE 303 >gi|283785157|ref|YP_003365022.1| electron transport complex protein [Citrobacter rodentium ICC168] gi|282948611|emb|CBG88202.1| electron transport complex protein [Citrobacter rodentium ICC168] Length = 192 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--- 55 M V+ E NCI C T C++ CPVD + + D C C +C CP I Sbjct: 108 MLAVIDEANCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTQCITLR 165 Query: 56 -KPDTEPGLEL 65 DT + Sbjct: 166 PVADTPDTWKW 176 >gi|228470502|ref|ZP_04055369.1| ferredoxin [Porphyromonas uenonis 60-3] gi|228307798|gb|EEK16754.1| ferredoxin [Porphyromonas uenonis 60-3] Length = 319 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CI C + C +VCP + N I +C C C ECP AI P Sbjct: 217 ANACIGC--SKCFKVCPFEAITFENNLAYIDHQKCRLCRKCAAECPTGAIHEVNLPP 271 Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 13 KHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 + DCV VC D + + D+C CG C CP Sbjct: 143 GNGDCVAVCDFDAIHMNPETGLPEVDEDKCTACGACVKACP 183 >gi|224373020|ref|YP_002607392.1| indolepyruvate oxidoreductase subunit IorA [Nautilia profundicola AmH] gi|223589889|gb|ACM93625.1| indolepyruvate oxidoreductase subunit IorA [Nautilia profundicola AmH] Length = 600 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP-ECPVDAIKP 57 V E C+ C VCP + E + I P CI CGVC CP DA P Sbjct: 542 ATVDEEKCVACDVCTTQYVCPPMAYNERG-KIEIDPLLCIGCGVCISGICPTDAFIP 597 >gi|170728773|ref|YP_001762799.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814120|gb|ACA88704.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 240 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + E + + +C C C CP DA I +T+ Sbjct: 110 SCQQCKNAPCVTVCPTGAAHRDEKTGIVTMDAAKCAGCKYCIAACPYDARFINKETDVAD 169 Query: 64 ELWLKINSEYA 74 +NS+ A Sbjct: 170 NCDFCLNSKLA 180 >gi|23450982|gb|AAN32622.1|AF373594_2 putative benzoyl-CoA oxygenase [Thauera aromatica] Length = 416 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E+CP++ + D C C C CP AI Sbjct: 19 EVCIRCN--TCEEMCPINAITHDARNYVVKFDVCKGCLACISPCPTGAI 65 Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CP++AI D Sbjct: 16 IDPEVCIRCNTCEEMCPINAITHDAR 41 >gi|73748666|ref|YP_307905.1| hydrogenase subunit HymB [Dehalococcoides sp. CBDB1] gi|73660382|emb|CAI82989.1| hydrogenase subunit HymB [Dehalococcoides sp. CBDB1] Length = 640 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 Y+ + C C C CP D G+ + I +CI CG C CP Sbjct: 563 YIDPDKCKAC--MICARNCPTDAIKGGKGLIHTIEQGKCIKCGACVDTCPA 611 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I PD+C C +C CP DAIK Sbjct: 562 FYIDPDKCKACMICARNCPTDAIK 585 >gi|332085057|gb|EGI90237.1| iron-sulfur protein [Shigella boydii 5216-82] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|297568110|ref|YP_003689454.1| FAD dependent oxidoreductase [Desulfurivibrio alkaliphilus AHT2] gi|296924025|gb|ADH84835.1| FAD dependent oxidoreductase [Desulfurivibrio alkaliphilus AHT2] Length = 680 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 7/48 (14%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECP 51 C C C C EGE + PD CI CG C CP Sbjct: 625 CRDC--HICENTCHYGAISRRDLGEGEFEYVVDPDRCIGCGFCAGTCP 670 >gi|256811300|ref|YP_003128669.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus fervens AG86] gi|256794500|gb|ACV25169.1| Cobyrinic acid ac-diamide synthase [Methanocaldococcus fervens AG86] Length = 269 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 Y + NCI C C+E+C D + I+P C CG CE C +A++P Sbjct: 63 YKINNNCIKCG--KCLEICQFDAIED----FKINPILCEGCGACELICEFNAVEP 111 >gi|256827734|ref|YP_003151693.1| 4Fe-4S protein [Cryptobacterium curtum DSM 15641] gi|256583877|gb|ACU95011.1| 4Fe-4S protein [Cryptobacterium curtum DSM 15641] Length = 384 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 17 CVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CV +CP+D +N L I + C+ CG C CP +A+ P P Sbjct: 39 CVAICPIDETITIEKNNLLIDFERCVSCGACTTACPTNALAPLDPPD 85 >gi|239617465|ref|YP_002940787.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506296|gb|ACR79783.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Kosmotoga olearia TBF 19.5.1] Length = 354 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 NC+ C C CPV E I D CI CG C C A+ P + EL Sbjct: 193 NCVACG--MCERHCPVGAITI-EGVARIDYDICIGCGQCIAMCNYGAMVPKWDSSTELLS 249 Query: 68 KINSEYAT 75 K EYA Sbjct: 250 KKMVEYAK 257 >gi|167629547|ref|YP_001680046.1| 4fe-4S ferredoxin, pshb protein [Heliobacterium modesticaldum Ice1] gi|119675287|gb|ABL89193.1| PshB [Heliobacterium modesticaldum] gi|167592287|gb|ABZ84035.1| 4fe-4S ferredoxin, pshb protein [Heliobacterium modesticaldum Ice1] Length = 54 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M Y +T+ C C C++ C V EG +I D C+DCGVC +CPVDAI P Sbjct: 1 MAYKITDACTACG--ACMDGCCVGAIVEG-KKYSITSD-CVDCGVCADKCPVDAIIP 53 >gi|300855217|ref|YP_003780201.1| putative transcriptional regulator [Clostridium ljungdahlii DSM 13528] gi|300435332|gb|ADK15099.1| predicted transcriptional regulator containing a ferredoxin domain [Clostridium ljungdahlii DSM 13528] Length = 638 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 7/56 (12%) Query: 4 VVTENCILCKHTDCVEVCP-----VDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V+ E C C C+ CP V G + + I + CI CG C C A Sbjct: 8 VLKEKCTGCN--KCIRTCPILGANVTATENGVSKVYIDEERCIGCGECVKVCEHGA 61 >gi|268597677|ref|ZP_06131844.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae FA19] gi|268599929|ref|ZP_06134096.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae MS11] gi|268602263|ref|ZP_06136430.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID18] gi|268604529|ref|ZP_06138696.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae PID1] gi|268682984|ref|ZP_06149846.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID332] gi|268687412|ref|ZP_06154274.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|291042886|ref|ZP_06568627.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae DGI2] gi|293398104|ref|ZP_06642309.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae F62] gi|304389075|ref|ZP_07371119.1| NADH-quinone oxidoreductase subunit I [Neisseria meningitidis ATCC 13091] gi|268551465|gb|EEZ46484.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae FA19] gi|268584060|gb|EEZ48736.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae MS11] gi|268586394|gb|EEZ51070.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID18] gi|268588660|gb|EEZ53336.1| NADH-ubiquinone oxidoreductase [Neisseria gonorrhoeae PID1] gi|268623268|gb|EEZ55668.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae PID332] gi|268627696|gb|EEZ60096.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|291013320|gb|EFE05286.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae DGI2] gi|291611367|gb|EFF40437.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae F62] gi|304336948|gb|EFM03138.1| NADH-quinone oxidoreductase subunit I [Neisseria meningitidis ATCC 13091] Length = 164 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 63 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAI 119 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 63 ERCIACKLCEAVCPAMAINIESEERED 89 >gi|218193826|gb|EEC76253.1| hypothetical protein OsI_13702 [Oryza sativa Indica Group] Length = 261 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 160 ERCIACKL--CEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 216 Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 13/69 (18%) Query: 7 ENCILCKHTDCVEVC--------PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAI 55 E CI CK C V P+ + GE+ L +P + CI C +CE CP AI Sbjct: 120 ERCIACKL--CEAVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAI 177 Query: 56 KPDTEPGLE 64 + E + Sbjct: 178 TIEAEERED 186 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 201 CIYCGF--CQEACPVDAIVEGPNF 222 >gi|219123199|ref|XP_002181917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406518|gb|EEC46457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 163 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C CP E E+ I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAACPAQAITIEVQEREDGARRTTRYDIDMTKCIYCGFCQEACPVDAI 118 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 62 ERCIACKLCEAACPAQAITIEVQERED 88 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|213021596|ref|ZP_03336043.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 180 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 11 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 55 >gi|153001066|ref|YP_001366747.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella baltica OS185] gi|151365684|gb|ABS08684.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella baltica OS185] Length = 181 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDA--IKPDT 59 C+ C++ C+ VCP ++ ++ + + ++C CG+C CP DA I+ D Sbjct: 60 ACMHCENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYDAVSIREDD 114 >gi|146311476|ref|YP_001176550.1| electron transport complex protein RnfB [Enterobacter sp. 638] gi|145318352|gb|ABP60499.1| electron transport complex, RnfABCDGE type, B subunit [Enterobacter sp. 638] Length = 192 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 4 VVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 V+ E NCI C T C++ CPVD + + D C C +C CP I Sbjct: 111 VIDEANCIGC--TKCIQACPVDAIVGATRAMHTVIADLCTGCNLCVAPCPTQCI 162 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Query: 18 VEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAI 55 V+ PVD + I CI C C CPVDAI Sbjct: 91 VDPQPVDGDESAQEPARLLAVIDEANCIGCTKCIQACPVDAI 132 >gi|83644719|ref|YP_433154.1| electron transport complex protein RnfB [Hahella chejuensis KCTC 2396] gi|123767479|sp|Q2SKU5|RNFB_HAHCH RecName: Full=Electron transport complex protein rnfB gi|83632762|gb|ABC28729.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Hahella chejuensis KCTC 2396] Length = 197 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 108 AYIREDECIGC--TKCIQACPVDAILGAAKQMHTVIVSECTGCDLCVEPCPVDCI 160 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 15/27 (55%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G+ I DECI C C CPVDAI Sbjct: 104 GKQVAYIREDECIGCTKCIQACPVDAI 130 >gi|34556567|ref|NP_906382.1| hypothetical protein WS0117 [Wolinella succinogenes DSM 1740] gi|400894|sp|P31076|PSRB_WOLSU RecName: Full=Polysulfide reductase chain B; AltName: Full=Sulfur reductase chain B gi|48527|emb|CAA46177.1| psrB [Wolinella succinogenes] gi|34482281|emb|CAE09282.1| NRFC [Wolinella succinogenes] Length = 191 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 ++C+ C++T CV VCP Y E+ + ++ D C+ C C CP A D Sbjct: 59 QSCVQCENTPCVSVCPTKASYVNEDGIVSVNVDLCVGCLYCIAACPYQARYVD 111 >gi|89093172|ref|ZP_01166122.1| probable ferredoxin [Oceanospirillum sp. MED92] gi|89082468|gb|EAR61690.1| probable ferredoxin [Oceanospirillum sp. MED92] Length = 474 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV VCPV EC+ CG C C Sbjct: 270 DCIDCN--ACVHVCPVGIDIRDGLQY-----ECVACGACVDAC 305 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 20/62 (32%), Gaps = 25/62 (40%) Query: 17 CVEVCPVDCF---YEGENFLAIHPDE----------------------CIDCGVCEPECP 51 C+ +CP F ++ L I DE CIDC C CP Sbjct: 223 CIYMCPYARFQSVMFDQDTLIISYDEKRGENRGKRKKGSDYKAKGLGDCIDCNACVHVCP 282 Query: 52 VD 53 V Sbjct: 283 VG 284 >gi|147669425|ref|YP_001214243.1| NADH dehydrogenase (quinone) [Dehalococcoides sp. BAV1] gi|146270373|gb|ABQ17365.1| NADH dehydrogenase (quinone) [Dehalococcoides sp. BAV1] Length = 640 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 Y+ + C C C CP D G+ + I +CI CG C CP Sbjct: 563 YIDPDKCKAC--MICARNCPTDAIKGGKGLIHTIEQGKCIKCGACVDTCPA 611 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I PD+C C +C CP DAIK Sbjct: 562 FYIDPDKCKACMICARNCPTDAIK 585 >gi|146296868|ref|YP_001180639.1| NADH dehydrogenase (quinone) [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410444|gb|ABP67448.1| NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 598 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + C C C + CP + + + I ++CI CGVC +CP AI Sbjct: 547 DLCKGCG--ICAKNCPANAITGQIKKPFEIDQEKCIKCGVCIEKCPFKAI 594 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CP + + I D C CG+C CP +AI + E Sbjct: 531 CPAGA-CKALLRIVIDKDLCKGCGICAKNCPANAITGQIKKPFE 573 >gi|332560639|ref|ZP_08414957.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332274437|gb|EGJ19753.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 469 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 18/98 (18%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 +CI C CV VCP+ EG+ CI CG+C C + GL + Sbjct: 250 DCIDC--MACVNVCPMGIDIREGQQM------ACITCGLCIDACDDTMDRIGRPRGLIGY 301 Query: 67 LKINSEY--------ATQWPNITTKKESLPSAAKMDGV 96 L ++ E+ A W + + SL AA GV Sbjct: 302 LALSDEHLERAGDAPAPAWKRLFRLRTSLY-AALWAGV 338 >gi|309379794|emb|CBX21570.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 61 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAI 117 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 61 ERCIACKLCEAVCPAMAINIESEERED 87 >gi|296242044|ref|YP_003649531.1| dihydroorotate dehydrogenase family protein [Thermosphaera aggregans DSM 11486] gi|296094628|gb|ADG90579.1| dihydroorotate dehydrogenase family protein [Thermosphaera aggregans DSM 11486] Length = 403 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 7/56 (12%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CI C C +VC D + G+ + +C CG+C CP AI + Sbjct: 350 CIGCGF--CQQVCDYDAVHVEESGGGKRLAVVDRTKCYGCGLCTSVCPTRAIHFEE 403 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + +CI CG C+ C DA+ + G Sbjct: 345 VDEKKCIGCGFCQQVCDYDAVHVEESGG 372 >gi|296133903|ref|YP_003641150.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermincola sp. JR] gi|296032481|gb|ADG83249.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermincola potens JR] Length = 597 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 VT+ C+ CK CP I C CGVC CP DAI+ Sbjct: 545 VTDKCVGCKVCMNKLGCP--ALVPAGEK-VIIGATCTGCGVCRQVCPADAIEE 594 >gi|296159154|ref|ZP_06841981.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. Ch1-1] gi|295890715|gb|EFG70506.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia sp. Ch1-1] Length = 279 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + + C C +C P CPVD I Sbjct: 89 CIGC--TLCMQACPVDAIVGAPKQMHTVIAELCTGCDLCVPPCPVDCI 134 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 83 VIDEQVCIGCTLCMQACPVDAI 104 >gi|284038435|ref|YP_003388365.1| cytochrome C oxidase accessory protein CcoG [Spirosoma linguale DSM 74] gi|283817728|gb|ADB39566.1| cytochrome c oxidase accessory protein CcoG [Spirosoma linguale DSM 74] Length = 497 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 18/67 (26%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKP 57 +C+ CK CV VCP G ECI+C C C P+ I+ Sbjct: 297 DCVDCKL--CVHVCPTGIDIRNGTQM------ECINCTACMDACDDVMLKIDRPLGLIRM 348 Query: 58 DTEPGLE 64 D++ G+E Sbjct: 349 DSQKGIE 355 >gi|116748614|ref|YP_845301.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697678|gb|ABK16866.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 990 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 7/51 (13%) Query: 9 CILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C CV+VCP EG I C CG C CP A Sbjct: 921 CRGCG--KCVDVCPYGSPQLVEVGEGVFVSQIQEALCKGCGACAVACPTGA 969 Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 26/77 (33%), Gaps = 26/77 (33%) Query: 3 YVVTENCILCKHTDCVEVCPV---DCFYEG---------------ENFLAIHPDECID-- 42 YV + CI C C CP D F G + AI + C Sbjct: 26 YVDLDKCISCG--ACAGKCPTVVIDAFNAGLGKRKAIYKYYAQAIPSGYAIDAENCRQLG 83 Query: 43 ----CGVCEPECPVDAI 55 CG+C CP DA+ Sbjct: 84 HGKKCGICAKVCPADAV 100 >gi|331085092|ref|ZP_08334178.1| hypothetical protein HMPREF0987_00481 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407875|gb|EGG87365.1| hypothetical protein HMPREF0987_00481 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 263 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 V + CI C C +VCP D N I P++C +CG C +CP Sbjct: 213 VCSTGCIGC--RMCQKVCPADAIVVENNLAWIDPEKCTNCGACAEKCP 258 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 12 CKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C CV+ CP D + + + + C CG C CP + I+ Sbjct: 145 CGFGTCVKACPFDAIHIVDGVAVVDKEACKACGKCIKACPKNLIE 189 Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGV 45 V E C C C++ CP + +G++ +A+ CI C + Sbjct: 166 AVVDKEACKACG--KCIKACPKNLIELVPYEAKHLVQCSSKEKGKDVMAVCSTGCIGCRM 223 Query: 46 CEPECPVDAIKPDTEPGL 63 C+ CP DAI + Sbjct: 224 CQKVCPADAIVVENNLAW 241 >gi|330836087|ref|YP_004410728.1| glycyl-radical enzyme activating protein family [Spirochaeta coccoides DSM 17374] gi|329747990|gb|AEC01346.1| glycyl-radical enzyme activating protein family [Spirochaeta coccoides DSM 17374] Length = 297 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI C CVE CP E + + I C CG+C +CP A+ D Sbjct: 53 ACIQCG--ICVETCPERAL-ELDGRIHIDKKHCTGCGMCIEKCPAAAMAFD 100 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 37 PDECIDCGVCEPECPVDAIKPD 58 P CI CG+C CP A++ D Sbjct: 51 PSACIQCGICVETCPERALELD 72 >gi|304315005|ref|YP_003850152.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] gi|302588464|gb|ADL58839.1| conserved hypothetical protein containing a ferredoxin domain [Methanothermobacter marburgensis str. Marburg] Length = 128 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E C+ C CV +CPV +++ I +CI C C CP AI Sbjct: 77 EKCVDCG--ACVSLCPVSAICIEDDWEIRIDDQKCIGCSFCVNSCPTGAI 124 Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 ++C+DCG C CPV AI + + Sbjct: 75 DREKCVDCGACVSLCPVSAICIEDD 99 >gi|299135024|ref|ZP_07028215.1| NADH-quinone oxidoreductase, chain I [Afipia sp. 1NLS2] gi|298590001|gb|EFI50205.1| NADH-quinone oxidoreductase, chain I [Afipia sp. 1NLS2] Length = 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAI 117 >gi|253582926|ref|ZP_04860144.1| predicted protein [Fusobacterium varium ATCC 27725] gi|251835132|gb|EES63675.1| predicted protein [Fusobacterium varium ATCC 27725] Length = 56 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + CI C C CPV ++ D C+DCG C CPV AI + Sbjct: 7 DACIGCG--ACEGTCPVGAIAATDDGKYGISDACVDCGACAGGCPVSAISAE 56 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTE 60 I D CI CG CE CPV AI + Sbjct: 1 MHVIDKDACIGCGACEGTCPVGAIAATDD 29 >gi|259908516|ref|YP_002648872.1| electron transport complex protein RnfB [Erwinia pyrifoliae Ep1/96] gi|224964138|emb|CAX55645.1| Electron transport complex protein [Erwinia pyrifoliae Ep1/96] gi|283478476|emb|CAY74392.1| Electron transport complex protein rnfB [Erwinia pyrifoliae DSM 12163] gi|310767588|gb|ADP12538.1| electron transport complex protein RnfB [Erwinia sp. Ejp617] Length = 191 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 115 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDICTGCDLCVAPCPTDCIE 162 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 111 IDEANCIGCTKCIQACPVDAI 131 >gi|168260584|ref|ZP_02682557.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350180|gb|EDZ36811.1| protein AegA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 17/46 (36%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + CI C C CP A Sbjct: 58 CHQCEDASCANVCPVQAIRRDRGHIFVTSSRCIGCKSCMLACPFGA 103 >gi|147678756|ref|YP_001212971.1| pyruvate-formate lyase-activating enzyme [Pelotomaculum thermopropionicum SI] gi|146274853|dbj|BAF60602.1| pyruvate-formate lyase-activating enzyme [Pelotomaculum thermopropionicum SI] Length = 303 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +C CK +C++ C + E + I + CI CG CE C AI+ Sbjct: 54 ATSCKFCK--NCIKACKKEAIIAEEKGVLIDRNLCIRCGKCEEVCLYKAIE 102 >gi|146284315|ref|YP_001174468.1| ferredoxin [Pseudomonas stutzeri A1501] gi|145572520|gb|ABP81626.1| ferredoxin [Pseudomonas stutzeri A1501] gi|327482699|gb|AEA86009.1| ferredoxin [Pseudomonas stutzeri DSM 4166] Length = 83 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T++CI C C CP +GE I P+ C +C C+ CPVD Sbjct: 1 MSLKITDDCINCDV--CEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTE 60 I D Sbjct: 59 IPLDEN 64 >gi|157960268|ref|YP_001500302.1| formate dehydrogenase subunit beta [Shewanella pealeana ATCC 700345] gi|157845268|gb|ABV85767.1| formate dehydrogenase, beta subunit [Shewanella pealeana ATCC 700345] Length = 300 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 8 NCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ C C+ C + N + D+C CG C CP D + D + Sbjct: 97 ACMHCDDPACLTACSTKGAIVQRANGVVDFDSDKCTGCGYCVSACPFDVPRLD-PIDQKA 155 Query: 66 W 66 + Sbjct: 156 Y 156 >gi|77461570|ref|YP_351077.1| 4Fe-4S ferredoxin, iron-sulfur binding [Pseudomonas fluorescens Pf0-1] gi|229593162|ref|YP_002875281.1| ferredoxin [Pseudomonas fluorescens SBW25] gi|77385573|gb|ABA77086.1| ferredoxin [Pseudomonas fluorescens Pf0-1] gi|229365028|emb|CAY53192.1| ferredoxin [Pseudomonas fluorescens SBW25] Length = 83 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T++CI C C CP +GE I P+ C C C+ CPVD Sbjct: 1 MSLIITDDCINCDV--CEPECPNAAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPDTEPGL 63 I D Sbjct: 59 IPLDEAHPE 67 >gi|13541825|ref|NP_111513.1| ferredoxin subunit of tungsten formylmethanofuran dehydrogenase [Thermoplasma volcanium GSS1] gi|14325262|dbj|BAB60166.1| ferredoxin [Thermoplasma volcanium GSS1] Length = 70 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C C CV +CP D + E + IH ++CI+CG C CP AI + Sbjct: 17 CNYCG--ACVGMCPTDAIWLDETVIKIHEEKCIECGFCIVGCPTGAINAE 64 >gi|188492317|ref|ZP_02999587.1| 4Fe-4S binding domain protein [Escherichia coli 53638] gi|188487516|gb|EDU62619.1| 4Fe-4S binding domain protein [Escherichia coli 53638] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|157157371|ref|YP_001465049.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli E24377A] gi|300925653|ref|ZP_07141516.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|301328345|ref|ZP_07221444.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|307314632|ref|ZP_07594232.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|157079401|gb|ABV19109.1| 4Fe-4S binding domain protein [Escherichia coli E24377A] gi|300418241|gb|EFK01552.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300845206|gb|EFK72966.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|306905845|gb|EFN36369.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli W] gi|315062860|gb|ADT77187.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli W] gi|323376549|gb|ADX48817.1| hypothetical protein EKO11_0153 [Escherichia coli KO11] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|15804119|ref|NP_290158.1| hypothetical protein Z4998 [Escherichia coli O157:H7 EDL933] gi|15833710|ref|NP_312483.1| hypothetical protein ECs4456 [Escherichia coli O157:H7 str. Sakai] gi|82545944|ref|YP_409891.1| hypothetical protein SBO_3581 [Shigella boydii Sb227] gi|168746879|ref|ZP_02771901.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4113] gi|168753395|ref|ZP_02778402.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4401] gi|168759667|ref|ZP_02784674.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4501] gi|168765990|ref|ZP_02790997.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4486] gi|168772463|ref|ZP_02797470.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4196] gi|168779726|ref|ZP_02804733.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4076] gi|168785447|ref|ZP_02810454.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC869] gi|168797413|ref|ZP_02822420.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC508] gi|191165250|ref|ZP_03027093.1| 4Fe-4S binding domain protein [Escherichia coli B7A] gi|194431034|ref|ZP_03063327.1| 4Fe-4S binding domain protein [Shigella dysenteriae 1012] gi|195935105|ref|ZP_03080487.1| hypothetical protein EscherichcoliO157_01395 [Escherichia coli O157:H7 str. EC4024] gi|208807546|ref|ZP_03249883.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4206] gi|208814607|ref|ZP_03255936.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4045] gi|208819373|ref|ZP_03259693.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4042] gi|209397848|ref|YP_002273059.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4115] gi|209921040|ref|YP_002295124.1| putative electron transport protein [Escherichia coli SE11] gi|217325836|ref|ZP_03441920.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. TW14588] gi|218697290|ref|YP_002404957.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli 55989] gi|254795530|ref|YP_003080367.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. TW14359] gi|256020921|ref|ZP_05434786.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Shigella sp. D9] gi|260858031|ref|YP_003231922.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O26:H11 str. 11368] gi|260870304|ref|YP_003236706.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O111:H- str. 11128] gi|261224892|ref|ZP_05939173.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. FRIK2000] gi|261254209|ref|ZP_05946742.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. FRIK966] gi|291284950|ref|YP_003501768.1| 4Fe-4S binding domain protein [Escherichia coli O55:H7 str. CB9615] gi|300815195|ref|ZP_07095420.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|300822022|ref|ZP_07102165.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|309797567|ref|ZP_07691956.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|332282143|ref|ZP_08394556.1| hydrogenase 4Fe-4S ferredoxin-type component [Shigella sp. D9] gi|12518314|gb|AAG58722.1|AE005584_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13363931|dbj|BAB37879.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|81247355|gb|ABB68063.1| conserved hypothetical protein [Shigella boydii Sb227] gi|187771623|gb|EDU35467.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4196] gi|188018443|gb|EDU56565.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4113] gi|189002389|gb|EDU71375.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4076] gi|189358874|gb|EDU77293.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4401] gi|189364728|gb|EDU83147.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4486] gi|189369477|gb|EDU87893.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4501] gi|189374644|gb|EDU93060.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC869] gi|189379940|gb|EDU98356.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC508] gi|190904652|gb|EDV64358.1| 4Fe-4S binding domain protein [Escherichia coli B7A] gi|194420489|gb|EDX36565.1| 4Fe-4S binding domain protein [Shigella dysenteriae 1012] gi|208727347|gb|EDZ76948.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4206] gi|208735884|gb|EDZ84571.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4045] gi|208739496|gb|EDZ87178.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4042] gi|209159248|gb|ACI36681.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. EC4115] gi|209755058|gb|ACI75841.1| hypothetical protein ECs4456 [Escherichia coli] gi|209755060|gb|ACI75842.1| hypothetical protein ECs4456 [Escherichia coli] gi|209755062|gb|ACI75843.1| hypothetical protein ECs4456 [Escherichia coli] gi|209755064|gb|ACI75844.1| hypothetical protein ECs4456 [Escherichia coli] gi|209755066|gb|ACI75845.1| hypothetical protein ECs4456 [Escherichia coli] gi|209914299|dbj|BAG79373.1| putative electron transport protein [Escherichia coli SE11] gi|217322057|gb|EEC30481.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. TW14588] gi|218354022|emb|CAV00522.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli 55989] gi|254594930|gb|ACT74291.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O157:H7 str. TW14359] gi|257756680|dbj|BAI28182.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O26:H11 str. 11368] gi|257766660|dbj|BAI38155.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli O111:H- str. 11128] gi|290764823|gb|ADD58784.1| 4Fe-4S binding domain protein [Escherichia coli O55:H7 str. CB9615] gi|300525385|gb|EFK46454.1| 4Fe-4S binding domain protein [Escherichia coli MS 119-7] gi|300532087|gb|EFK53149.1| 4Fe-4S binding domain protein [Escherichia coli MS 107-1] gi|308118837|gb|EFO56099.1| 4Fe-4S binding domain protein [Escherichia coli MS 145-7] gi|320175867|gb|EFW50947.1| Electron transport protein HydN [Shigella dysenteriae CDC 74-1112] gi|320178126|gb|EFW53104.1| Electron transport protein HydN [Shigella boydii ATCC 9905] gi|320187730|gb|EFW62405.1| Electron transport protein HydN [Shigella flexneri CDC 796-83] gi|320191370|gb|EFW66020.1| Electron transport protein HydN [Escherichia coli O157:H7 str. EC1212] gi|320639894|gb|EFX09488.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. G5101] gi|320645057|gb|EFX14081.1| 4Fe-4S binding domain protein [Escherichia coli O157:H- str. 493-89] gi|320650324|gb|EFX18807.1| 4Fe-4S binding domain protein [Escherichia coli O157:H- str. H 2687] gi|320655898|gb|EFX23821.1| 4Fe-4S binding domain protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661679|gb|EFX29094.1| 4Fe-4S binding domain protein [Escherichia coli O55:H7 str. USDA 5905] gi|320666703|gb|EFX33686.1| 4Fe-4S binding domain protein [Escherichia coli O157:H7 str. LSU-61] gi|323155476|gb|EFZ41656.1| iron-sulfur protein [Escherichia coli EPECa14] gi|323174232|gb|EFZ59860.1| iron-sulfur protein [Escherichia coli LT-68] gi|323179462|gb|EFZ65029.1| iron-sulfur protein [Escherichia coli 1180] gi|323939526|gb|EGB35734.1| 4Fe-4S binding domain-containing protein [Escherichia coli E482] gi|323944529|gb|EGB40600.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|324017903|gb|EGB87122.1| 4Fe-4S binding domain protein [Escherichia coli MS 117-3] gi|324116547|gb|EGC10464.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1167] gi|326337422|gb|EGD61257.1| Electron transport protein HydN [Escherichia coli O157:H7 str. 1044] gi|326339947|gb|EGD63754.1| Electron transport protein HydN [Escherichia coli O157:H7 str. 1125] gi|332084535|gb|EGI89730.1| iron-sulfur protein [Shigella dysenteriae 155-74] gi|332089497|gb|EGI94601.1| iron-sulfur protein [Shigella boydii 3594-74] gi|332104495|gb|EGJ07841.1| hydrogenase 4Fe-4S ferredoxin-type component [Shigella sp. D9] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|329897534|ref|ZP_08272141.1| Thioredoxin reductase [gamma proteobacterium IMCC3088] gi|328921129|gb|EGG28534.1| Thioredoxin reductase [gamma proteobacterium IMCC3088] Length = 438 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C CV CP G + I+ CI G C+ CP DAI Sbjct: 60 CLGCG--ACVNACPEGDVLGLIGGKSVLINGANCIGHGACKAACPFDAI 106 Score = 39.7 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 35 IHPDECIDCGVCEPECPVD 53 I P +C+ CG C CP Sbjct: 55 IDPSKCLGCGACVNACPEG 73 >gi|310780423|ref|YP_003968755.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] gi|309749746|gb|ADO84407.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ilyobacter polytropus DSM 2926] Length = 263 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV T ENC C C +VCPVD + EN D+C C C CP AI Sbjct: 185 YVYTDENCTGCGL--CAKVCPVDNIIVDKENKKIALQDKCFGCFACIQNCPSRAIH 238 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 16/35 (45%) Query: 26 FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + EG + C CG+C CPVD I D E Sbjct: 178 YGEGIENYVYTDENCTGCGLCAKVCPVDNIIVDKE 212 >gi|299483498|gb|ADJ19579.1| putative Fe-S PAS/PAC sensor protein [Treponema primitia ZAS-2] Length = 583 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C C+ CPV + I P CI CG C CP A Sbjct: 12 ECQDC--FKCISRCPVKSIQVKDGHAEIIPKICIYCGNCVISCPARA 56 >gi|291228641|ref|XP_002734288.1| PREDICTED: ATP-binding cassette, sub-family E, member 1-like [Saccoglossus kowalevskii] Length = 488 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 10/61 (16%) Query: 4 VVTENCI--LCKHTDCVEVCPVD-----CFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 V T+ C C+ +C + CPV C N I + CI CG+C +CP +A Sbjct: 12 VSTDKCKPKRCR-QECKKSCPVVRMGKLCIEVTSNDKIAYISEELCIGCGICAKKCPFEA 70 Query: 55 I 55 I Sbjct: 71 I 71 >gi|297568400|ref|YP_003689744.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924315|gb|ADH85125.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 189 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++ CV+VCP Y+ E+ L I CI C C CP DA Sbjct: 68 CQHCQNPPCVKVCPTSASYQTEDGLVAIDYKRCIVCASCILACPYDA 114 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 33 LAIHPDECIDCGVCEPEC 50 + + PD+CIDC C+ C Sbjct: 11 MVVDPDKCIDCKACDVAC 28 >gi|170758629|ref|YP_001788890.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] gi|169405618|gb|ACA54029.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree] Length = 449 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I + C DCG C CP +I Sbjct: 81 DCSMDCKKEGGKTFCQSSCPFDAILINKKTNSTYIDTERCTDCGFCVEACPTGSI 135 Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE 28 TY+ TE C C CVE CP + Sbjct: 113 TYIDTERCTDCGF--CVEACPTGSILD 137 >gi|192289827|ref|YP_001990432.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192283576|gb|ACE99956.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 607 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+T C C C+ + CP D ++EG + + I P CI C +C C +D IK Sbjct: 544 VITSQCTAC--QSCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIA 601 Query: 59 TEP 61 T Sbjct: 602 TPA 604 >gi|23394377|gb|AAN31478.1| NADH dehydrogenase [Phytophthora infestans] Length = 211 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 110 ERCIACKL--CEAICPAQAITIEAEPRADGARRTTRYDIDMTKCIYCGFCQEACPVDAI 166 Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 110 ERCIACKLCEAICPAQAITIEAEPRAD 136 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 151 CIYCGF--CQEACPVDAIVEGPNF 172 >gi|58582129|ref|YP_201145.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426723|gb|AAW75760.1| ferredoxin [Xanthomonas oryzae pv. oryzae KACC10331] Length = 108 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 10/96 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + C+ C C CP GE I P C +C C CPV+ Sbjct: 15 MSLKINALCVNCDV--CEPACPNQAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVEC 72 Query: 55 IKPD--TEPGLELWLKINSEYATQWPNITTKKESLP 88 I PD + L + P + K+ P Sbjct: 73 IDPDPAIPETHDQLLAKLMQLQRDHPELYEKEPPAP 108 >gi|146277735|ref|YP_001167894.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17025] gi|145555976|gb|ABP70589.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17025] Length = 164 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E + I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAAACPVDCIDVVKAETPDGRWYPESFRINFARCIFCGYCEEACPTSAIQ 106 Query: 57 PDTEPGLELW 66 + L + Sbjct: 107 LTPDVELADY 116 >gi|312876536|ref|ZP_07736519.1| protein of unknown function DUF362 [Caldicellulosiruptor lactoaceticus 6A] gi|311796747|gb|EFR13093.1| protein of unknown function DUF362 [Caldicellulosiruptor lactoaceticus 6A] Length = 375 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNACPAQAIEMKSRKAYVDLKKCIRCYCCHELCPAKAIK 363 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + CI C C CP AI+ Sbjct: 312 VFDRNICIGCAECFNACPAQAIE 334 >gi|312792686|ref|YP_004025609.1| hypothetical protein Calkr_0447 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179826|gb|ADQ39996.1| protein of unknown function DUF362 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 375 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNACPAQAIEMKSRKAYVDLKKCIRCYCCHELCPAKAIK 363 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + CI C C CP AI+ Sbjct: 312 VFDRNICIGCAECFNACPAQAIE 334 >gi|302344053|ref|YP_003808582.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] gi|301640666|gb|ADK85988.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfarculus baarsii DSM 2075] Length = 384 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 18/86 (20%) Query: 6 TENCILCKHTDCVEVCPVDCFY---EGENF-------------LAIHPDECIDCGVCEPE 49 E CI C CV CP G + ++CI CG C Sbjct: 192 AERCIACGQ--CVRRCPGLAIRLVKRGPDMPPAPAGSEKPELCAVKDAEKCIGCGDCILT 249 Query: 50 CPVDAIKPDTEPGLELWLKINSEYAT 75 CP AI+ + + +++ + Y Sbjct: 250 CPQSAIEIAWDAQIPQFMRRMAAYTK 275 Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Query: 35 IHPDECIDCGVCEPECPVDAIK-----PDTEPG 62 I + CI CG C CP AI+ PD P Sbjct: 190 IRAERCIACGQCVRRCPGLAIRLVKRGPDMPPA 222 >gi|291544581|emb|CBL17690.1| Iron only hydrogenase large subunit, C-terminal domain [Ruminococcus sp. 18P13] Length = 431 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA--IKPDTEPGLELW 66 C C T+C++ CP I + CIDCG C CP A D+ ++ + Sbjct: 16 CKGC--TNCIKRCPTQAIRVRNRKAEITNECCIDCGECIRICPHHAKEATYDSPDVMKQY 73 >gi|296136307|ref|YP_003643549.1| electron transport complex, RnfABCDGE type, B subunit [Thiomonas intermedia K12] gi|295796429|gb|ADG31219.1| electron transport complex, RnfABCDGE type, B subunit [Thiomonas intermedia K12] Length = 210 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 9 CILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 CI C T C++ CPVD + + D C C +C P CPVD I+ + + Sbjct: 88 CIGC--TLCIQACPVDAIAGVSKRMHTVIDDWCTGCALCLPPCPVDCIRMEAQAD 140 Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 25 CFYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C EG I P CI C +C CPVDAI Sbjct: 72 CGTEGPRERAVIDPALCIGCTLCIQACPVDAI 103 >gi|255016076|ref|ZP_05288202.1| hypothetical protein B2_19400 [Bacteroides sp. 2_1_7] Length = 256 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 T+ CI C C +VCP + D C+ C C CPV AI+ Sbjct: 191 TDACISCG--ICAKVCPTGTISLSGDGKPEWADSCVQCVACIHRCPVRAIEY 240 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 38 DECIDCGVCEPECPVDAIKP--DTEPGL 63 D CI CG+C CP I D +P Sbjct: 192 DACISCGICAKVCPTGTISLSGDGKPEW 219 >gi|255014281|ref|ZP_05286407.1| putative pyruvate formate-lyase 3 activating enzyme [Bacteroides sp. 2_1_7] gi|256841502|ref|ZP_05547009.1| pyruvate formate-lyase 1-activating enzyme [Parabacteroides sp. D13] gi|256737345|gb|EEU50672.1| pyruvate formate-lyase 1-activating enzyme [Parabacteroides sp. D13] Length = 309 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V CI C C +CP ++F + C+ C CE CP +AIK Sbjct: 59 VKNKCIGCG--RCEAICPRGNIAIQDHFPVFNRQACVACKACERICPQNAIKF 109 >gi|256827263|ref|YP_003151222.1| 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family/2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family [Cryptobacterium curtum DSM 15641] gi|256583406|gb|ACU94540.1| 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family/2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family [Cryptobacterium curtum DSM 15641] Length = 355 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 5/65 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDTE 60 V + C C C CP + + + C C VCE CP DAI +E Sbjct: 260 VDAQRCTGCLQ--CYLYCPDGAIKRTPSAAVVVSVDTEFCKGCAVCEQVCPFDAISMVSE 317 Query: 61 PGLEL 65 ++ Sbjct: 318 ATIKQ 322 >gi|206900598|ref|YP_002250293.1| Fe-hydrogenase beta subunit [Dictyoglomus thermophilum H-6-12] gi|206739701|gb|ACI18759.1| Fe-hydrogenase beta subunit [Dictyoglomus thermophilum H-6-12] Length = 624 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 3 YVVT-ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 YV+ E C C C CP E I ++C CG+C +C AI+ Sbjct: 569 YVINPELCKGCGL--CARSCPQSAISGERGKPYVIDQEKCAKCGICVEKCKFKAIE 622 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 20 VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 +CP I+P+ C CG+C CP AI + Sbjct: 557 ICPSG-MCTAFKKYVINPELCKGCGLCARSCPQSAISGE 594 >gi|126462511|ref|YP_001043625.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17029] gi|156632694|sp|A3PKI7|NUOI2_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|126104175|gb|ABN76853.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17029] Length = 164 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E + I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAAACPVDCIDVVKAETPDGRWYPESFRINFARCIFCGYCEEACPTSAIQ 106 Query: 57 PDTEPGLELW 66 + L + Sbjct: 107 LTPDVELADY 116 >gi|77463081|ref|YP_352585.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides 2.4.1] gi|126461953|ref|YP_001043067.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides ATCC 17029] gi|221638937|ref|YP_002525199.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides KD131] gi|332557954|ref|ZP_08412276.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] gi|115502510|sp|Q3J3F0|NUOI1_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|156632691|sp|A3PIX9|NUOI1_RHOS1 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|77387499|gb|ABA78684.1| Subunit of NADH-ubiquinone oxidoreductase (Complex I) that contains 2 Fe-S centers [Rhodobacter sphaeroides 2.4.1] gi|126103617|gb|ABN76295.1| NADH-quinone oxidoreductase, chain I [Rhodobacter sphaeroides ATCC 17029] gi|221159718|gb|ACM00698.1| NADH-quinone oxidoreductase subunit I 1 [Rhodobacter sphaeroides KD131] gi|332275666|gb|EGJ20981.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] Length = 167 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 122 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 66 ERCIACKLCEAVCPAQAITIDAEPRED 92 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 107 CIYCGF--CQEACPVDAIVEGPNF 128 >gi|260833833|ref|XP_002611916.1| hypothetical protein BRAFLDRAFT_287714 [Branchiostoma floridae] gi|229297289|gb|EEN67925.1| hypothetical protein BRAFLDRAFT_287714 [Branchiostoma floridae] Length = 218 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 117 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 173 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 117 ERCIACKLCEAICPAQAITIEAEPRAD 143 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 158 CIYCGF--CQEACPVDAIVEGPNF 179 >gi|153938366|ref|YP_001392904.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|152934262|gb|ABS39760.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland] gi|295320881|gb|ADG01259.1| [Fe] hydrogenase [Clostridium botulinum F str. 230613] Length = 449 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Query: 8 NC-ILCKH----TDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 +C + CK T C CP D + N I + C DCG C CP +I Sbjct: 81 DCSMDCKKEGGKTFCQNSCPFDAILINKKTNSTYIDTERCTDCGFCVEACPTGSI 135 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE 28 TY+ TE C C CVE CP + Sbjct: 113 TYIDTERCTDCGF--CVEACPTGSILD 137 >gi|159042495|ref|YP_001541747.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921330|gb|ABW02757.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Caldivirga maquilingensis IC-167] Length = 651 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 4 VVTEN--CILCKHTDCVEVCPVDCFYEGENFL---AIHPDECIDCGVCEPECPVDAI 55 VV + CI CK DC + CPV +F+ CI G C CP + I Sbjct: 565 VVKDPGLCIECKTKDCAKACPVGNSNMPGSFIKKGYYKSSTCIGVGDCVEACPYNNI 621 >gi|119897731|ref|YP_932944.1| electron transport complex protein RnfB [Azoarcus sp. BH72] gi|166225080|sp|A1K5F2|RNFB_AZOSB RecName: Full=Electron transport complex protein rnfB; AltName: Full=Nitrogen fixation protein rnfB gi|119670144|emb|CAL94057.1| probable electron transport complex protein RnfB [Azoarcus sp. BH72] Length = 183 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 Y+ CI C T C++ CPVD + + P C C +C CPVD I + Sbjct: 106 AYIDENVCIGC--TLCLQACPVDAIVGAAKQMHTVVDP-LCTGCELCVAPCPVDCIYME 161 >gi|20090344|ref|NP_616419.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19915348|gb|AAM04899.1| ferredoxin [Methanosarcina acetivorans C2A] Length = 102 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 11 LCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C + CV VCP E ++ + CI CG+C+ CPV AI+ Sbjct: 53 KCGYCGACVGVCPKGALELVETWIEVDESTCIKCGICDRICPVGAIE 99 >gi|307304402|ref|ZP_07584153.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] gi|307318109|ref|ZP_07597545.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306896150|gb|EFN26900.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti AK83] gi|306902604|gb|EFN33198.1| NADH-quinone oxidoreductase, chain I [Sinorhizobium meliloti BL225C] Length = 188 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC I C+ CG+CE CP DAI Sbjct: 68 CVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|289432692|ref|YP_003462565.1| NADH dehydrogenase (quinone) [Dehalococcoides sp. GT] gi|288946412|gb|ADC74109.1| NADH dehydrogenase (quinone) [Dehalococcoides sp. GT] Length = 640 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 Y+ + C C C CP D G+ + I +CI CG C CP Sbjct: 563 YIDPDKCKAC--MICARNCPTDAIKGGKGLIHTIEQGKCIKCGACVDTCPA 611 Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I PD+C C +C CP DAIK Sbjct: 562 FYIDPDKCKACMICARNCPTDAIK 585 >gi|197285613|ref|YP_002151485.1| NADH dehydrogenase subunit I [Proteus mirabilis HI4320] gi|227356116|ref|ZP_03840506.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis ATCC 29906] gi|226737407|sp|B4EZC3|NUOI_PROMH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|194683100|emb|CAR43657.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis HI4320] gi|227163761|gb|EEI48673.1| NADH-quinone oxidoreductase chain I [Proteus mirabilis ATCC 29906] Length = 180 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C +G F I+ CI CG+CE CP A++ Sbjct: 58 ERCVACNL--CAAVCPVGCISLQKAEHEDGRWYPEFFRINFSRCIFCGLCEEACPTTALQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|188580277|ref|YP_001923722.1| NADH dehydrogenase subunit I [Methylobacterium populi BJ001] gi|226737400|sp|B1ZA38|NUOI_METPB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|179343775|gb|ACB79187.1| NADH-quinone oxidoreductase, chain I [Methylobacterium populi BJ001] Length = 162 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%) Query: 21 CPVDCFYEGENFLAIHP--------DECIDCGVCEPECPVDAIKPDTEP 61 P + + G F H + CI C +CE CP AI + P Sbjct: 35 YPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|16263279|ref|NP_436072.1| NADH:ubiquinone oxidoreductase subunit 6 (chain I) [Sinorhizobium meliloti 1021] gi|81774724|sp|Q92YN8|NUOI2_RHIME RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|14523955|gb|AAK65484.1| NADH:ubiquinone oxidoreductase subunit 6 (chain I) [Sinorhizobium meliloti 1021] Length = 188 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----------YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC I C+ CG+CE CP DAI Sbjct: 68 CVACEL--CARICPCDCIEVVPYEDEKGNRRPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|332561493|ref|ZP_08415806.1| pyruvate formate lyase activating enzyme [Rhodobacter sphaeroides WS8N] gi|332273995|gb|EGJ19313.1| pyruvate formate lyase activating enzyme [Rhodobacter sphaeroides WS8N] Length = 305 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C C+ VC V G+N + +CI CG C CP +A+K Sbjct: 58 AEACIGCG--RCIPVCSVQALS-GDNPGFVDRSKCIRCGECTKVCPTEALK 105 Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI CG C P C V A+ D Sbjct: 59 EACIGCGRCIPVCSVQALSGDNP 81 >gi|242239961|ref|YP_002988142.1| NADH dehydrogenase subunit I [Dickeya dadantii Ech703] gi|242132018|gb|ACS86320.1| NADH-quinone oxidoreductase, chain I [Dickeya dadantii Ech703] Length = 180 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|225024115|ref|ZP_03713307.1| hypothetical protein EIKCOROL_00983 [Eikenella corrodens ATCC 23834] gi|224943140|gb|EEG24349.1| hypothetical protein EIKCOROL_00983 [Eikenella corrodens ATCC 23834] Length = 159 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTTRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|166032053|ref|ZP_02234882.1| hypothetical protein DORFOR_01755 [Dorea formicigenerans ATCC 27755] gi|166027776|gb|EDR46533.1| hypothetical protein DORFOR_01755 [Dorea formicigenerans ATCC 27755] Length = 625 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C C + C CPV ++ I +CI CG C C A+ + Sbjct: 575 EKCKGC--SKCARNCPVGAITGKIKSPYVIDSAKCIKCGACLENCSFGAVYTE 625 Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I+P++C C C CPV AI Sbjct: 572 INPEKCKGCSKCARNCPVGAI 592 >gi|157373371|ref|YP_001471971.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella sediminis HAW-EB3] gi|157315745|gb|ABV34843.1| anaerobic dimethyl sulfoxide reductase, B subunit [Shewanella sediminis HAW-EB3] Length = 225 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y ++ C C CV+ CP + E+ L + + CI C C CP DA + D Sbjct: 78 AYYMSIGCNHCSEPVCVKACPTGAMHKRREDGLVHVAQELCIGCESCARACPYDAPQIDR 137 Query: 60 E 60 E Sbjct: 138 E 138 >gi|126465204|ref|YP_001040313.1| indolepyruvate ferredoxin oxidoreductase, subunit iorA [Staphylothermus marinus F1] gi|126014027|gb|ABN69405.1| indolepyruvate ferredoxin oxidoreductase, subunit iorA [Staphylothermus marinus F1] Length = 624 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Query: 3 YVVTEN-CILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 Y + ++ C C CV + CP +G I + C CG+C CP +AI Sbjct: 556 YTILQDKCTGC--MVCVNLLGCPAIIVPKGAKKPVILSELCAGCGLCAQVCPFNAIV-LK 612 Query: 60 EPGLELWLK 68 E G W++ Sbjct: 613 EKGSPNWIE 621 >gi|91092422|ref|XP_968009.1| PREDICTED: similar to ribonuclease L inhibitor homolog [Tribolium castaneum] gi|270004744|gb|EFA01192.1| hypothetical protein TcasGA2_TC010519 [Tribolium castaneum] Length = 608 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 10/61 (16%) Query: 4 VVTENCI--LCKHTDCVEVCPVD-----CFYEGEN--FLAIHPDECIDCGVCEPECPVDA 54 V + C C+ +C + CPV C N AI + CI CG+C +CP +A Sbjct: 19 VNADKCKPKRCR-QECKKSCPVVRMGKLCIEVTPNSKMAAISEELCIGCGICVKKCPFEA 77 Query: 55 I 55 I Sbjct: 78 I 78 >gi|91793219|ref|YP_562870.1| electron transport complex protein RnfB [Shewanella denitrificans OS217] gi|91715221|gb|ABE55147.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella denitrificans OS217] Length = 205 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD I D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGAGKLMHTVIAAD-CTGCDLCVEPCPVDCI 159 >gi|82778809|ref|YP_405158.1| hypothetical protein SDY_3706 [Shigella dysenteriae Sd197] gi|309785895|ref|ZP_07680526.1| iron-sulfur protein [Shigella dysenteriae 1617] gi|81242957|gb|ABB63667.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308927015|gb|EFP72491.1| iron-sulfur protein [Shigella dysenteriae 1617] Length = 157 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|116750952|ref|YP_847639.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700016|gb|ABK19204.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Syntrophobacter fumaroxidans MPOB] Length = 950 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 25/79 (31%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAI------------------HPDECI--- 41 YV ++CI C +C +VCPV+ E ++I CI Sbjct: 31 YVDMDHCISCG--ECAKVCPVEVKDEFNEKMSIRKAIYVKYPQAVPLKYQIDGRNCIRVR 88 Query: 42 --DCGVCEPECPVDAIKPD 58 DCG CE CP A++ D Sbjct: 89 GGDCGGCEKVCPSGAVRFD 107 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 9/54 (16%) Query: 9 CILCKHTDCVEVCPVDC-------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C++VCP G + C CG C+ CP + I Sbjct: 870 CDGC--ALCLDVCPYGALQLEEIPGSNGRQHAVVKAARCKGCGACQATCPKEGI 921 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPG 62 I+ C C +C CP A++ + PG Sbjct: 865 INETTCDGCALCLDVCPYGALQLEEIPG 892 >gi|113969407|ref|YP_733200.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|114046641|ref|YP_737191.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|113884091|gb|ABI38143.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] gi|113888083|gb|ABI42134.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] Length = 83 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALLIDDSCINCD--MCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IDPD 62 >gi|94309231|ref|YP_582441.1| 4Fe-4S ferredoxin [Cupriavidus metallidurans CH34] gi|93353083|gb|ABF07172.1| ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) [Cupriavidus metallidurans CH34] Length = 86 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T++CI C C CP + G I P +C +C C+ CPV Sbjct: 1 MALMITDDCINCDV--CEPECPNEAISMGPEIYEIDPGKCTECVGHFDEPQCQQVCPVAC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPKD 62 >gi|294496330|ref|YP_003542823.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] gi|292667329|gb|ADE37178.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] Length = 541 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 11/63 (17%) Query: 4 VVTE---NCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECID--CGVCEPECPVDA 54 V+ E +CILC C + CP D G+ ++ ++C+ C C CPVDA Sbjct: 473 VIEEEAPDCILC--RKCEKECPEDAIIALEENGKKYVHYDSEKCLGTSCHRCIAICPVDA 530 Query: 55 IKP 57 I Sbjct: 531 IHY 533 >gi|291280349|ref|YP_003497184.1| NADH-quinone oxidoreductase subunit I [Deferribacter desulfuricans SSM1] gi|290755051|dbj|BAI81428.1| NADH-quinone oxidoreductase, I subunit [Deferribacter desulfuricans SSM1] Length = 153 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 9 CILCKHTDCVEVCPVDCFY----EGEN------FLAIHPDECIDCGVCEPECPVDAIK 56 C+ C C VCP +C + G N I D CI CG CE CPVDAI Sbjct: 63 CVGCYL--CERVCPSECIHIETDAGPNGERLIRKYEIELDRCIYCGFCEEACPVDAIH 118 >gi|270296346|ref|ZP_06202546.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273750|gb|EFA19612.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 315 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C C + CV+ CP +G+ + ++CI C C CP A D Sbjct: 243 VDAERCTHCGY--CVKHCPAGAIIKGDECNTV-AEKCIKCCACVKGCPQKARTYDMP 296 >gi|258404218|ref|YP_003196960.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796445|gb|ACV67382.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 144 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 + C+ C C E CP + + CI CG C CPVDAI D E Sbjct: 51 AQVCLACDPAPCAEACPTGAMRQRKGGGVVYTKSLCIQCGDCARACPVDAIYMDPE 106 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 CI C C CPVD Y A P CI CG C CP D ++ T P Sbjct: 86 CIQCGD--CARACPVDAIYMDPETNA--PVVCIHCGRCVEFCPHDCLEMVTVPSASK 138 >gi|224370248|ref|YP_002604412.1| HmeE2 [Desulfobacterium autotrophicum HRM2] gi|223692965|gb|ACN16248.1| HmeE2 [Desulfobacterium autotrophicum HRM2] Length = 274 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 + ++VT C CK+ CV+ CP ++ ++ + + CI C C CP + + Sbjct: 131 LPFLVT--CNHCKNAPCVQACPTQATFKRDDGIVLMDFHRCIGCRFCMAACPFGSRSFNF 188 Query: 60 EPGLELWLKINSEYATQWPNITTKK 84 ++N ++ T+ + K Sbjct: 189 RDPRPFIDEVNPDFPTRTKGVVEKC 213 >gi|169634069|ref|YP_001707805.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter baumannii SDF] gi|169796969|ref|YP_001714762.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter baumannii AYE] gi|239501200|ref|ZP_04660510.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter baumannii AB900] gi|260553988|ref|ZP_05826253.1| ferredoxin [Acinetobacter sp. RUH2624] gi|260555740|ref|ZP_05827960.1| ferredoxin [Acinetobacter baumannii ATCC 19606] gi|169149896|emb|CAM87789.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter baumannii AYE] gi|169152861|emb|CAP01891.1| putative ferredoxin [4Fe-4S] (Fdx) [Acinetobacter baumannii] gi|260404874|gb|EEW98379.1| ferredoxin [Acinetobacter sp. RUH2624] gi|260410651|gb|EEX03949.1| ferredoxin [Acinetobacter baumannii ATCC 19606] Length = 87 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ +T+ CI C C VCP + + GE I+PD C +C C+ CPVD Sbjct: 1 MSLYITDECINCDV--CEPVCPNEAIFMGEVIYEINPDLCTECVGHHDQPQCQLFCPVDC 58 Query: 55 IKPDTEPGL 63 I D + Sbjct: 59 IPKDPQHEE 67 >gi|156537914|ref|XP_001608142.1| PREDICTED: similar to ribonuclease L inhibitor homolog [Nasonia vitripennis] Length = 608 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 10/61 (16%) Query: 4 VVTENCI--LCKHTDCVEVCPVD-----CFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 V T+ C C+ +C CPV C N +I + CI CG+C +CP +A Sbjct: 19 VNTDKCKPKRCR-QECKRSCPVVRMGKLCIEVTPNSKIASISEELCIGCGICVKKCPFEA 77 Query: 55 I 55 I Sbjct: 78 I 78 >gi|121535727|ref|ZP_01667530.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121305692|gb|EAX46631.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 147 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENF-LAIHPDECIDCGVCEPECPVDAIKP 57 V T C C C VC E + L+ HPD+CI CG+C CPV AI+ Sbjct: 81 VDTGRCTHCG--ACTAVCFSRALVLERPTWELSFHPDKCIVCGLCVQACPVRAIRQ 134 >gi|313113434|ref|ZP_07799023.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624161|gb|EFQ07527.1| 4Fe-4S binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 296 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V T C+ C C + C +D + N ECI CG+C CP DAI+ Sbjct: 234 VDTHKCVSCG--ACAKACKMDVDITKTPNHA-----ECIRCGMCMKACPTDAIQY 281 >gi|301098846|ref|XP_002898515.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4] gi|262104940|gb|EEY62992.1| NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4] Length = 211 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 110 ERCIACKL--CEAICPAQAITIEAEPRADGARRTTSYDIDMTKCIYCGFCQEACPVDAI 166 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 110 ERCIACKLCEAICPAQAITIEAEPRAD 136 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 151 CIYCGF--CQEACPVDAIVEGPNF 172 >gi|239904831|ref|YP_002951569.1| heterodisulfide reductase subunit A [Desulfovibrio magneticus RS-1] gi|239794694|dbj|BAH73683.1| heterodisulfide reductase subunit A [Desulfovibrio magneticus RS-1] Length = 652 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 26/85 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 TYV E C C C+E CP D F E I P C Sbjct: 235 TYVDWELCTGCG--ACMEKCPSKKNPDAFNEKIGPCTSINIPFPQAIPKKAVIDPSTCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEPG 62 CGVC CP AI+ D Sbjct: 293 FVKGKCGVCAKVCPTKAIRYDMTDE 317 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C+ CP E G+ + C CG+C CP AI+ + Sbjct: 584 CVGCG--KCIMTCPFKAIKEVEFRGQKKAEVIETVCQGCGICTSTCPQGAIQLSHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 >gi|148555900|ref|YP_001263482.1| NADH dehydrogenase subunit I [Sphingomonas wittichii RW1] gi|148501090|gb|ABQ69344.1| NADH-quinone oxidoreductase, chain I [Sphingomonas wittichii RW1] Length = 161 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAEPRDDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 116 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 60 ERCIACKLCEAVCPAQAITIEAEPRDD 86 Score = 36.7 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 101 CIFCGF--CQEACPVDAIVEGPNFEY 124 >gi|126656634|ref|ZP_01727848.1| transcriptional regulator [Cyanothece sp. CCY0110] gi|126621854|gb|EAZ92562.1| transcriptional regulator [Cyanothece sp. CCY0110] Length = 532 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-GV-----CEPECPVDA 54 M+Y ++E+C C +C CP D I +C +C G C +CP+ + Sbjct: 1 MSYTISESCPSC--HNCQIDCPTDAIQTENGEYWIDQKKCNNCEGYYQEPQCIVQCPISS 58 Query: 55 IKP 57 P Sbjct: 59 PTP 61 >gi|114707377|ref|ZP_01440274.1| NADH dehydrogenase subunit I [Fulvimarina pelagi HTCC2506] gi|114537258|gb|EAU40385.1| NADH dehydrogenase subunit I [Fulvimarina pelagi HTCC2506] Length = 163 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRQNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEPGL 63 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGQERCIACKLCEAICPAQAITIEAGPRQ 86 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|30065142|ref|NP_839313.1| hypothetical protein S4152 [Shigella flexneri 2a str. 2457T] gi|56480380|ref|NP_709358.2| hypothetical protein SF3617 [Shigella flexneri 2a str. 301] gi|110807760|ref|YP_691280.1| hypothetical protein SFV_3967 [Shigella flexneri 5 str. 8401] gi|30043403|gb|AAP19124.1| hypothetical protein S4152 [Shigella flexneri 2a str. 2457T] gi|56383931|gb|AAN45065.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|110617308|gb|ABF05975.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|281602938|gb|ADA75922.1| 4Fe-4S binding domain protein [Shigella flexneri 2002017] gi|313647555|gb|EFS12005.1| iron-sulfur protein [Shigella flexneri 2a str. 2457T] gi|332749976|gb|EGJ80388.1| iron-sulfur protein [Shigella flexneri K-671] gi|332751362|gb|EGJ81765.1| iron-sulfur protein [Shigella flexneri 2747-71] gi|332764223|gb|EGJ94460.1| putative electron transport protein HydN [Shigella flexneri 2930-71] gi|332996354|gb|EGK15981.1| iron-sulfur protein [Shigella flexneri VA-6] gi|332997147|gb|EGK16763.1| iron-sulfur protein [Shigella flexneri K-218] gi|333012831|gb|EGK32208.1| iron-sulfur protein [Shigella flexneri K-304] Length = 157 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|83591649|ref|YP_425401.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] gi|83574563|gb|ABC21114.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodospirillum rubrum ATCC 11170] Length = 212 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C+ C VC + + + + + C+ C +C CP A + +P Sbjct: 82 CRHCEDAPCASVCKMAAISRVDGKVLVDAERCVGCRLCLMACPFGATEFVPQPAD 136 >gi|24372832|ref|NP_716874.1| ferredoxin, 4Fe-4S [Shewanella oneidensis MR-1] gi|24346934|gb|AAN54319.1|AE015569_5 ferredoxin, 4Fe-4S [Shewanella oneidensis MR-1] Length = 83 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALLIDDSCINCD--MCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IDPD 62 >gi|11498110|ref|NP_069335.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] gi|32699494|sp|O29751|HMEA_ARCFU RecName: Full=Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1; Short=Hme subunit A; Flags: Precursor gi|2650126|gb|AAB90738.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Archaeoglobus fulgidus DSM 4304] Length = 269 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 Y + C C+H CV+VC ++ + + I CI C C CP A Sbjct: 112 YYIPLLCNHCEHPPCVQVCLTKASFKRPDGIVEIDMHRCIGCRYCMIACPYGA 164 >gi|120598032|ref|YP_962606.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. W3-18-1] gi|146293897|ref|YP_001184321.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens CN-32] gi|120558125|gb|ABM24052.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. W3-18-1] gi|145565587|gb|ABP76522.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella putrefaciens CN-32] gi|319427269|gb|ADV55343.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella putrefaciens 200] Length = 83 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALLIDDSCINCD--MCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IDPD 62 >gi|16272998|ref|NP_439225.1| nitrite reductase Fe-S protein [Haemophilus influenzae Rd KW20] gi|145627975|ref|ZP_01783776.1| nitrite reductase Fe-S protein [Haemophilus influenzae 22.1-21] gi|145638122|ref|ZP_01793732.1| nitrite reductase Fe-S protein [Haemophilus influenzae PittII] gi|260580152|ref|ZP_05847982.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|260581880|ref|ZP_05849676.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|1171766|sp|P45015|NRFC_HAEIN RecName: Full=Protein nrfC homolog; Flags: Precursor gi|1574621|gb|AAC22725.1| nitrite reductase, Fe-S protein (nrfC) [Haemophilus influenzae Rd KW20] gi|144979750|gb|EDJ89409.1| nitrite reductase Fe-S protein [Haemophilus influenzae 22.1-21] gi|145272451|gb|EDK12358.1| nitrite reductase Fe-S protein [Haemophilus influenzae PittII] gi|260093436|gb|EEW77369.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae RdAW] gi|260095073|gb|EEW78965.1| cytochrome c nitrite reductase, Fe-S protein [Haemophilus influenzae NT127] gi|309751287|gb|ADO81271.1| Nitrite reductase complex, Fe-S subunit NrfC [Haemophilus influenzae R2866] Length = 225 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C + CV VCP F + E + +H D CI C C CP Sbjct: 92 QSCQHCTNAPCVAVCPTGASFIDKETGIVDVHKDLCIGCQYCIAVCPY 139 >gi|87200306|ref|YP_497563.1| NADH dehydrogenase subunit I [Novosphingobium aromaticivorans DSM 12444] gi|115502536|sp|Q2G5Z4|NUOI_NOVAD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|87135987|gb|ABD26729.1| NADH dehydrogenase subunit I [Novosphingobium aromaticivorans DSM 12444] Length = 161 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAVCPAQAITIEAEPREDGSRRTTRYDIDMTKCIFCGFCQEACPVDAI 116 >gi|257076625|ref|ZP_05570986.1| indolepyruvate oxidoreductase, alpha subunit [Ferroplasma acidarmanus fer1] Length = 629 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Query: 3 YVVTEN-CILCKHTDCVE--VCPVDCFYEGENFLAIHPDECIDCGVCEP--ECPVDAIK 56 Y V ++ C C +CVE CP +GE + I+P C CGVC CP +AI+ Sbjct: 572 YTVNQDKCGKC--MNCVENFSCPALFIEKGE--IQINPSICDGCGVCAEPLVCPFNAIE 626 >gi|323704059|ref|ZP_08115672.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfotomaculum nigrificans DSM 574] gi|323530979|gb|EGB20905.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Desulfotomaculum nigrificans DSM 574] Length = 764 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V C+ C CVEVCP G ++P C CG C C AI Sbjct: 690 AFVNKRKCMACGV--CVEVCPAKAASLVTDERGNTAAEVNPALCKGCGACSSSCRCGAI 746 >gi|299146847|ref|ZP_07039915.1| putative iron-sulfur cluster-binding protein [Bacteroides sp. 3_1_23] gi|298517338|gb|EFI41219.1| putative iron-sulfur cluster-binding protein [Bacteroides sp. 3_1_23] Length = 312 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +VVT+NCI C C +VCP + N + + D C C C CP AI+ Sbjct: 225 FVVTKNCIDCG--ACTDVCPRGNYEFTSNGIKMQGD-CDFCFACIQNCPQKAIQFKKNDE 281 Query: 63 L 63 Sbjct: 282 D 282 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 30 ENFLAIHPDECIDCGVCEPECP 51 EN+ + + CIDCG C CP Sbjct: 222 ENYFVVTKN-CIDCGACTDVCP 242 >gi|269215798|ref|ZP_06159652.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] gi|269130748|gb|EEZ61824.1| anaerobic dimethyl sulfoxide reductase, B subunit [Slackia exigua ATCC 700122] Length = 206 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDE-CIDCGVCEPECPVDAIKPDT 59 T+ ++ C C + CV VCPV Y + E+ H DE CI C +C CP K D Sbjct: 65 TFHLSMTCNNCANPACVAVCPVGAMYIDEEDGTTQHDDEMCIGCQMCINACPYGVPKFDD 124 >gi|242278076|ref|YP_002990205.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120970|gb|ACS78666.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 652 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 CI C C+ CP E G+ + C CG+C CP AI+ + Sbjct: 584 CIGCG--KCISTCPFGAIKEIDFRGQPKADVIETICQGCGICTSTCPQGAIQLQHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 26/81 (32%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYEG---------------ENFLAIHPDECID 42 TYV + C C C+E CP + F E I P+ CI Sbjct: 235 TYVDWDKCTGCG--ICMEKCPSKKADNPFDEELGKTTAINIPFPQAIPKKAVIDPNFCIK 292 Query: 43 -----CGVCEPECPVDAIKPD 58 CGVC CP +AI D Sbjct: 293 IKRDKCGVCAKVCPSEAIVYD 313 Score = 35.5 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 11/24 (45%) Query: 34 AIHPDECIDCGVCEPECPVDAIKP 57 + CI CG C CP AIK Sbjct: 578 VVDIKRCIGCGKCISTCPFGAIKE 601 >gi|159905551|ref|YP_001549213.1| pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta [Methanococcus maripaludis C6] gi|159887044|gb|ABX01981.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanococcus maripaludis C6] Length = 85 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ C+ +C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCE--NCYIFCPEGCIQEKDGKFEIDYDYCKGCRICEKECPVKAIKTEREE 84 >gi|126736053|ref|ZP_01751797.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] gi|126714610|gb|EBA11477.1| NADH-quinone oxidoreductase chain I [Roseobacter sp. CCS2] Length = 167 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 66 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 122 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 66 ERCIACKLCEAVCPAQAITIDAEPRDD 92 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 107 CIYCGF--CQEACPVDAIVEGPNF 128 >gi|134045159|ref|YP_001096645.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C5] gi|132662784|gb|ABO34430.1| membrane-bound hydrogenase subunit ehaR [Methanococcus maripaludis C5] Length = 252 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C E+CPV + + + +CI CG CE CPV AI Sbjct: 199 DTCINC--MVCSEICPVGAIIYEDGLMKLDDKKCIFCGKCEKNCPVTAI 245 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 YV T C+ C+ C EVCPV E ++ I P++C+ C +C CPV AI Sbjct: 42 YVETNKCVRCEL--CYEVCPVQAIKEPSVKSPAEIIPEKCVKCEICAKTCPVGAI 94 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 10/61 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C+ C T C +VCP EN ++++ D CI+C VC CPV AI + Sbjct: 162 DLCMGC--TACEKVCPKSSIKVENEMGEIPTENVISLNNDTCINCMVCSEICPVGAIIYE 219 Query: 59 T 59 Sbjct: 220 D 220 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C C CP E + I+ D C+ C CE CP +IK + E G Sbjct: 132 ESCIKCG--ICERFCPTSAIKVEKRTSIDINLDLCMGCTACEKVCPKSSIKVENEMGE 187 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 28/92 (30%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EG------ENFLA------------------IHP 37 ++ E C+ C+ C + CPV EG +N + + Sbjct: 74 IIPEKCVKCE--ICAKTCPVGAINVLEGRAELKDDNVIYELKEIDVTHRKIRLKKHELDE 131 Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + CI CG+CE CP AIK + +++ L + Sbjct: 132 ESCIKCGICERFCPTSAIKVEKRTSIDINLDL 163 >gi|324005536|gb|EGB74755.1| 4Fe-4S binding domain protein [Escherichia coli MS 57-2] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|323698801|ref|ZP_08110713.1| response regulator receiver protein [Desulfovibrio sp. ND132] gi|323458733|gb|EGB14598.1| response regulator receiver protein [Desulfovibrio desulfuricans ND132] Length = 1142 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 20/65 (30%) Query: 9 CILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCGVCEPEC 50 CI C C EVCPV E N + D CI C C C Sbjct: 117 CISCG--RCAEVCPVRVPSEFNAGLTERTAVHLPVPYAIPNHYVLDLDNCIRCWKCHEAC 174 Query: 51 PVDAI 55 P AI Sbjct: 175 PTGAI 179 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C LC CV CP E + + C CG C CP A Sbjct: 1074 CSLC--QACVSACPYGARAVDTTEEKIIVDEILCQGCGACAAVCPNSA 1119 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 11/18 (61%) Query: 35 IHPDECIDCGVCEPECPV 52 I P +CI CG C CPV Sbjct: 112 IDPAKCISCGRCAEVCPV 129 >gi|323697536|ref|ZP_08109448.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio sp. ND132] gi|323457468|gb|EGB13333.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans ND132] Length = 270 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 8 NCILCKHTDCVEVCPV---DCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C+ C CV VCPV D EG I+P CI C C CP A Sbjct: 89 PCMQCGSPACVPVCPVVATDKNEEGGIVSQIYP-RCIGCRYCMAACPYHA 137 >gi|254995042|ref|ZP_05277232.1| NADH dehydrogenase subunit I [Anaplasma marginale str. Mississippi] Length = 156 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 55 ERCIACKL--CEAICPAQAITIEAAERGDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 111 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 96 CIYCGF--CQEACPVDAIVEGPNFEY 119 Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 + CI C +CE CP AI + Sbjct: 55 ERCIACKLCEAICPAQAITIE 75 >gi|168185724|ref|ZP_02620359.1| electron transfer flavoprotein subunit alpha [Clostridium botulinum C str. Eklund] gi|169296383|gb|EDS78516.1| electron transfer flavoprotein subunit alpha [Clostridium botulinum C str. Eklund] Length = 396 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C+ CK C CP E EN A+ D C CG C C +AI+ Sbjct: 9 DKCVGCK--MCANTCPFGAI-EIENKKAVIKDNCTLCGSCVSVCKFNAIE 55 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I D+C+ C +C CP AI+ + Sbjct: 6 ILKDKCVGCKMCANTCPFGAIEIE 29 >gi|157373627|ref|YP_001472227.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157316001|gb|ABV35099.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 234 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + E + + +C C C CP DA I +T+ Sbjct: 104 SCQQCKNAPCVTVCPTGAAHRDEKTGIVTMDASKCAGCKYCIGACPYDARFINKETDVAD 163 Query: 64 ELWLKINSEYAT 75 +NS+ + Sbjct: 164 NCDFCLNSKLSK 175 >gi|157960336|ref|YP_001500370.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845336|gb|ABV85835.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 236 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + E + + +C C C CP DA I +T+ Sbjct: 106 SCQQCKNAPCVTVCPTGAAHRDEKTGIVTMDAAKCAGCKYCIAACPYDARFINKETDVAD 165 Query: 64 ELWLKINSEYA 74 +NS+ A Sbjct: 166 NCDFCLNSKLA 176 >gi|118466276|ref|YP_879707.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium avium 104] gi|118167563|gb|ABK68460.1| 4Fe-4S binding domain protein [Mycobacterium avium 104] Length = 330 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 133 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE 184 >gi|154173868|ref|YP_001408698.1| sulfur reductase FeS subunit [Campylobacter curvus 525.92] gi|112802398|gb|EAT99742.1| sulfur reductase FeS subunit [Campylobacter curvus 525.92] Length = 188 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 + ++C++C+ + CV+VCP F E + C+ C C CP DA Sbjct: 53 FIRQSCVMCEDSPCVDVCPTGASFKTKEGVTLLDHRICVSCKYCILACPYDA 104 >gi|74318493|ref|YP_316233.1| iron-sulfur cluster protein [Thiobacillus denitrificans ATCC 25259] gi|74057988|gb|AAZ98428.1| iron-sulfur cluster protein [Thiobacillus denitrificans ATCC 25259] Length = 259 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C CV+VCP F + + ++ CI C C CP A Sbjct: 120 CQHCAEPPCVDVCPTGASFKRADGIVLVNRHTCIGCRYCMMACPYKA 166 >gi|26249298|ref|NP_755338.1| putative electron transport protein ygfS [Escherichia coli CFT073] gi|91212263|ref|YP_542249.1| putative electron transport protein YgfS [Escherichia coli UTI89] gi|237706472|ref|ZP_04536953.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|26109705|gb|AAN81908.1|AE016765_310 Putative electron transport protein ygfS [Escherichia coli CFT073] gi|91073837|gb|ABE08718.1| putative electron transport protein YgfS [Escherichia coli UTI89] gi|226899512|gb|EEH85771.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 163 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|20808132|ref|NP_623303.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoanaerobacter tengcongensis MB4] gi|20516720|gb|AAM24907.1| Fe-S-cluster-containing hydrogenase components 1 [Thermoanaerobacter tengcongensis MB4] Length = 161 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 C C+ CV VCP + E+ L ++ +CI C +C CP A+ Sbjct: 61 CRHCEDAPCVAVCPTGAMHRREDGLNLVNLPQCIGCWMCALACPFGAV 108 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 5/59 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECID---CGVCEPECPVDAIKPDTEPGLE 64 CI C C CP G+ EC+D C CP A+ T E Sbjct: 93 CIGC--WMCALACPFGAVSRGDGKAIKCDRECLDEEGVPACVRACPTGALVFKTVEEFE 149 >gi|323966686|gb|EGB62118.1| 4Fe-4S binding domain-containing protein [Escherichia coli M863] gi|327251647|gb|EGE63333.1| hydrogenase-4 component A [Escherichia coli STEC_7v] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|291280352|ref|YP_003497187.1| NADH-quinone oxidoreductase subunit F [Deferribacter desulfuricans SSM1] gi|290755054|dbj|BAI81431.1| NADH-quinone oxidoreductase, F subunit [Deferribacter desulfuricans SSM1] Length = 596 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 3 YVVTEN-CILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV E+ C C C +VCPV E I +C+ C C CP +AI Sbjct: 543 FVVDEDRCKKCG--ICFKVCPVGAISWEKGKPAYIDKSKCVKCRECIVNCPFNAI 595 Score = 40.1 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 7/49 (14%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 K C CP E + D C CG+C CPV AI + Sbjct: 526 HIKDRKCPARECPE--LIE----FVVDEDRCKKCGICFKVCPVGAISWE 568 >gi|269968577|ref|ZP_06182579.1| iron-sulfur cluster-binding protein [Vibrio alginolyticus 40B] gi|269826788|gb|EEZ81120.1| iron-sulfur cluster-binding protein [Vibrio alginolyticus 40B] Length = 553 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGRSPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|163850509|ref|YP_001638552.1| NADH dehydrogenase subunit I [Methylobacterium extorquens PA1] gi|218529206|ref|YP_002420022.1| NADH dehydrogenase subunit I [Methylobacterium chloromethanicum CM4] gi|240137574|ref|YP_002962045.1| NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) [Methylobacterium extorquens AM1] gi|254560045|ref|YP_003067140.1| NADH-quinone oxidoreductase subunit I [Methylobacterium extorquens DM4] gi|226737399|sp|A9W1M5|NUOI_METEP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|254772593|sp|B7KQ58|NUOI_METC4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|163662114|gb|ABY29481.1| NADH-quinone oxidoreductase, chain I [Methylobacterium extorquens PA1] gi|218521509|gb|ACK82094.1| NADH-quinone oxidoreductase, chain I [Methylobacterium chloromethanicum CM4] gi|240007542|gb|ACS38768.1| NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) [Methylobacterium extorquens AM1] gi|254267323|emb|CAX23155.1| NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) [Methylobacterium extorquens DM4] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG+C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAI 117 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%) Query: 21 CPVDCFYEGENFLAIHP--------DECIDCGVCEPECPVDAIKPDTEP 61 P + + G F H + CI C +CE CP AI + P Sbjct: 35 YPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCG--MCQEACPVDAIVEGPNF 123 >gi|37679887|ref|NP_934496.1| ferredoxin [Vibrio vulnificus YJ016] gi|37198632|dbj|BAC94467.1| ferredoxin [Vibrio vulnificus YJ016] Length = 557 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP + + + I+P C G C CP +AI Sbjct: 177 TDLCAHSSRGVKGCERCVDACPAGALTSQGSDKTGHHIEINPYLCQGVGTCATSCPTEAI 236 Query: 56 KPDTEPGLE--LWLK 68 E +++ Sbjct: 237 HYALPNPQETQKFIE 251 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T C LC CV VCP + L +C+ CG+C CP Sbjct: 421 TTGCTLC--MSCVAVCPTRALHTDGESPSLQFVEQDCVQCGLCTKACP 466 >gi|332997622|gb|EGK17236.1| iron-sulfur protein [Shigella flexneri K-272] gi|333013370|gb|EGK32742.1| iron-sulfur protein [Shigella flexneri K-227] Length = 157 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|325832620|ref|ZP_08165418.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|325485941|gb|EGC88401.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 190 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +C C + +CV VCP Y+ ++ + + +CI C C CP DT Sbjct: 53 YYLPVSCQHCDNPECVSVCPTGASYKRDDGVVLVDHSKCIGCQYCVMACPYGVRAYDTSK 112 Query: 62 G 62 Sbjct: 113 D 113 >gi|322780735|gb|EFZ09992.1| hypothetical protein SINV_04706 [Solenopsis invicta] Length = 286 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 107 ERCIACKL--CEAICPAQAITIEAEERADGSRRTTRYDIDMSKCIYCGFCQEACPVDAI 163 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + E + Sbjct: 107 ERCIACKLCEAICPAQAITIEAEERAD 133 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 148 CIYCGF--CQEACPVDAIVEGPNF 169 >gi|310658701|ref|YP_003936422.1| electron transport complex, rnfABCdge type subunit B [Clostridium sticklandii DSM 519] gi|308825479|emb|CBH21517.1| Electron transport complex, RnfABCDGE type, B subunit precursor [Clostridium sticklandii] Length = 325 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIK 56 V+ + CI C T C + CP + EGE + PD+CI C VC +CP AI+ Sbjct: 270 ARVIEDLCIGC--TICAKNCPTNAI-EGELKAIHKVDPDKCIGCKVCYQKCPKKAIE 323 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CI C CV+ CP N I +C C VC +CP AI D Sbjct: 216 CIGC--QICVKSCPFQAITFENNLAKIDYSKCTQCMVCVEKCPTKAISGDL 264 Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINS 71 C VCP D + ++ + + ++C+ CG C CP I G E+ + NS Sbjct: 143 GFGTCENVCPFDAIHVYDDGIAHVDEEKCVGCGKCIEACPKAVIHW-IPYGQEVSIDCNS 201 Query: 72 E 72 + Sbjct: 202 K 202 Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEG---ENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C CVE CP + D CI C +C CP +AI+ + + Sbjct: 245 CTQC--MVCVEKCPTKAISGDLSKRKTARVIEDLCIGCTICAKNCPTNAIEGELKA 298 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 18/83 (21%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGV 45 +V E C+ C C+E CP + +G++ CI C + Sbjct: 164 AHVDEEKCVGCG--KCIEACPKAVIHWIPYGQEVSIDCNSKEKGKDVKEKCSVGCIGCQI 221 Query: 46 CEPECPVDAIKPDTEPGLELWLK 68 C CP AI + + K Sbjct: 222 CVKSCPFQAITFENNLAKIDYSK 244 >gi|302348066|ref|YP_003815704.1| Ferredoxin like protein [Acidilobus saccharovorans 345-15] gi|302328478|gb|ADL18673.1| Ferredoxin like protein [Acidilobus saccharovorans 345-15] Length = 101 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 2 TYVVTE--NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 ++V + C C C+ +CP C+ + + + C++CG C CP+DAI + Sbjct: 30 PHIVVDYTKCEKCPAKPCIYLCPAGCYTLAGDRIVFSYEGCVECGTCRVICPMDAITWNY 89 Query: 60 EPG 62 Sbjct: 90 PKS 92 >gi|291547967|emb|CBL21075.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Ruminococcus sp. SR1/5] Length = 307 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + +E C CK CP + L I + C CG C +CP +I PD Sbjct: 167 PHFDSEACKGCKKCAIEATCPNKVAKVVDGKLHIDEELCRHCGRCVGKCPFHSI-PDGTY 225 Query: 62 GLELWL 67 G ++++ Sbjct: 226 GFKIYI 231 >gi|291543380|emb|CBL16489.1| Fe-S-cluster-containing hydrogenase components 2 [Ruminococcus sp. 18P13] Length = 149 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C C+ CV+ C + + I+ D CI C C CP AI P ++ Sbjct: 57 SCRHCEDPLCVKSCLTGALSVKDGVIRINSDRCIHCYTCILACPYGAIVPSDNGAVKK 114 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 6/61 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG----VCEPECPVDAIKPDTEP 61 ++ CI C C+ CP +N + C++ C CP AI + Sbjct: 86 SDRCIHC--YTCILACPYGAIVPSDNGAVKKCELCVNTATGLPNCVQGCPNGAIVFEDSE 143 Query: 62 G 62 Sbjct: 144 E 144 >gi|262406564|ref|ZP_06083113.1| ferredoxin-type protein [Bacteroides sp. 2_1_22] gi|262355267|gb|EEZ04358.1| ferredoxin-type protein [Bacteroides sp. 2_1_22] Length = 515 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 418 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 477 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 478 CPARPFRAIYIEGNPVQKE 496 Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 20/63 (31%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECI------DCGVCEPECPV 52 +C +C VCP ++ + CI CG C CP Sbjct: 392 DCTVCGD-----VCPNGAILPISVEQKHLTQMGYVVFIEENCIVYTDGTSCGACSEHCPT 446 Query: 53 DAI 55 A+ Sbjct: 447 QAV 449 >gi|304316330|ref|YP_003851475.1| electron transport complex, RnfABCDGE type subunit beta [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777832|gb|ADL68391.1| electron transport complex, RnfABCDGE type, B subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 279 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V T CI CK C C D + +N I ++C+ C C +CP D+I P Sbjct: 216 VCTVGCIGCK--ACERACNYDAVHVIDNLAKIDYEKCVSCMACVEKCPTDSIYP 267 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 17 CVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 C ++CP D + G+ + D+C CG+C CP + I+ Sbjct: 152 CEKLCPFDAIHVIGDGVAVVDEDKCTGCGICVDACPKNIIE 192 >gi|254773429|ref|ZP_05214945.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 330 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 133 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE 184 >gi|227876559|ref|ZP_03994670.1| glutamate synthase (NADPH) small subunit [Mobiluncus mulieris ATCC 35243] gi|269977760|ref|ZP_06184720.1| glutamate synthase [Mobiluncus mulieris 28-1] gi|227842873|gb|EEJ53071.1| glutamate synthase (NADPH) small subunit [Mobiluncus mulieris ATCC 35243] gi|269934064|gb|EEZ90638.1| glutamate synthase [Mobiluncus mulieris 28-1] Length = 550 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 NC C +C VCP + + D C CG+C ECP AI Sbjct: 497 NCFGCD--NCFGVCPDNAIKKIKPTQYVFKYDYCKGCGICAEECPCGAI 543 >gi|160943092|ref|ZP_02090329.1| hypothetical protein FAEPRAM212_00571 [Faecalibacterium prausnitzii M21/2] gi|158445561|gb|EDP22564.1| hypothetical protein FAEPRAM212_00571 [Faecalibacterium prausnitzii M21/2] Length = 294 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%) Query: 4 VVTENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V T C+ C C + C +D + N ECI CG+C CP DAI+ Sbjct: 232 VDTHKCVSCG--ACAKACKMDVDITKTPNHA-----ECIRCGMCMKACPTDAIQY 279 >gi|156937723|ref|YP_001435519.1| flavoprotein [Ignicoccus hospitalis KIN4/I] gi|156566707|gb|ABU82112.1| flavoprotein [Ignicoccus hospitalis KIN4/I] Length = 215 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V +C+ C+ CP G+ I + C+ C C +CP AI +E E Sbjct: 125 VINDCVGCEACPPQASCPTGAIV-GDRVRRILLERCVGCEACVGKCPFGAISCFSEAPFE 183 >gi|150026254|ref|YP_001297080.1| NADH dehydrogenase I, I subunit [Flavobacterium psychrophilum JIP02/86] gi|156633518|sp|A6H1Q5|NUOI_FLAPJ RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|149772795|emb|CAL44279.1| NADH dehydrogenase I, I subunit [Flavobacterium psychrophilum JIP02/86] Length = 183 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 19/67 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 ENC C C CP + E L I+ CI CG+CE Sbjct: 78 ENCTACGL--CALSCPAEAITMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEA 135 Query: 50 CPVDAIK 56 CP DAI Sbjct: 136 CPKDAIY 142 >gi|88603408|ref|YP_503586.1| cobyrinic acid a,c-diamide synthase [Methanospirillum hungatei JF-1] gi|88188870|gb|ABD41867.1| Cobyrinic acid a,c-diamide synthase [Methanospirillum hungatei JF-1] Length = 289 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 4 VV-TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ T++CI C C E C D + + P C CG C CP DA+ Sbjct: 63 VIDTKSCIGCG--ICAEACVYDAIQKVGEIYEVVPYRCEGCGTCTIVCPEDAV 113 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 27 YEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + G + I CI CG+C C DAI+ Sbjct: 56 FRGMDGAVIDTKSCIGCGICAEACVYDAIQ 85 >gi|89894195|ref|YP_517682.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219668592|ref|YP_002459027.1| dimethylsulfoxide reductase subunit B [Desulfitobacterium hafniense DCB-2] gi|89333643|dbj|BAE83238.1| putative anaerobic DMSO reductase chain B iron-sulfur subunit [Desulfitobacterium hafniense Y51] gi|219538852|gb|ACL20591.1| dimethylsulfoxide reductase, chain B [Desulfitobacterium hafniense DCB-2] Length = 190 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y ++ C C+H C E CP Y E + + + D+CI CG C CP + + Sbjct: 60 AYWLSLGCNHCEHPKCAENCPTGAMYKREEDGIVLVDQDKCIGCGYCTWSCPYEVPQ 116 >gi|266659|sp|P29921|NQO9_PARDE RecName: Full=NADH-quinone oxidoreductase subunit 9; AltName: Full=NADH dehydrogenase I subunit 9; AltName: Full=NDH-1 subunit 9 gi|150609|gb|AAA25593.1| NADH dehydrogenase [Paracoccus denitrificans] Length = 163 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIDAERREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 118 >gi|329118908|ref|ZP_08247603.1| NADH-quinone oxidoreductase subunit I [Neisseria bacilliformis ATCC BAA-1200] gi|327464936|gb|EGF11226.1| NADH-quinone oxidoreductase subunit I [Neisseria bacilliformis ATCC BAA-1200] Length = 159 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTTRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|323699778|ref|ZP_08111690.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio sp. ND132] gi|323459710|gb|EGB15575.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfovibrio desulfuricans ND132] Length = 141 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP-DECIDCGVCEPECPVDAIKPDTE 60 C+ C C E CP + + I + CI CG C CPVDAI D + Sbjct: 54 CLACHPAPCAEACPTGSLSQRRDGGVIQKRNLCIRCGRCAEACPVDAIFLDHQ 106 Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 CI C C E CPVD + ++P CI CG C CP D ++ P E Sbjct: 86 CIRCG--RCAEACPVDAIFLDHQ---VNPYVCIHCGQCVAYCPHDCLEMVDLPAREE 137 >gi|323138153|ref|ZP_08073226.1| NADH-quinone oxidoreductase, chain I [Methylocystis sp. ATCC 49242] gi|322396615|gb|EFX99143.1| NADH-quinone oxidoreductase, chain I [Methylocystis sp. ATCC 49242] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFY--EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP G I +CI CG C+ CPVDAI Sbjct: 60 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGYCQEACPVDAI 117 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C + C E CPVD EG N Sbjct: 102 CIYCGY--CQEACPVDAIVEGPNQ 123 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 P+ + GE+ L +P + CI C +CE CP AI + P Sbjct: 41 PISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 83 >gi|295106884|emb|CBL04427.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 261 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVD 53 C C + CVE CPV + + +CI C C CP Sbjct: 110 CRQCPYPSCVEACPVGAMHADPATGVRLVDEGKCIGCERCVEACPFT 156 >gi|258622882|ref|ZP_05717898.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM573] gi|258584821|gb|EEW09554.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM573] Length = 553 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|257792646|ref|YP_003183252.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488934|ref|ZP_07947464.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831070|ref|ZP_08164394.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] gi|257476543|gb|ACV56863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912008|gb|EFV33587.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486991|gb|EGC89437.1| thiosulfate reductase electron transport protein phsb [Eggerthella sp. HGA1] Length = 180 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 V C+ C+ CV VCP Y G + + + CI C C CP Sbjct: 53 TVPLQCMHCEDAPCVAVCPTGAAYIGADGIVGVDHGRCIGCLYCMAACPYQ 103 >gi|167623860|ref|YP_001674154.1| electron transport complex protein RnfB [Shewanella halifaxensis HAW-EB4] gi|167353882|gb|ABZ76495.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella halifaxensis HAW-EB4] Length = 189 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 107 AFIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|73668425|ref|YP_304440.1| hypothetical protein Mbar_A0886 [Methanosarcina barkeri str. Fusaro] gi|72395587|gb|AAZ69860.1| hypothetical protein Mbar_A0886 [Methanosarcina barkeri str. Fusaro] Length = 303 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---CIDCGVCEPECPVDAIKPD 58 E C C CV+VC Y + + I CI CG C CP AI + Sbjct: 19 EKCKTCGL--CVKVCKGAPIYLENDKVRIDQTRYFGCIGCGHCVAVCPTGAIAVE 71 >gi|125972950|ref|YP_001036860.1| NADH dehydrogenase (quinone) [Clostridium thermocellum ATCC 27405] gi|256005706|ref|ZP_05430662.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 2360] gi|281417161|ref|ZP_06248181.1| NADH dehydrogenase (quinone) [Clostridium thermocellum JW20] gi|125713175|gb|ABN51667.1| NADH dehydrogenase (quinone) [Clostridium thermocellum ATCC 27405] gi|255990337|gb|EEU00463.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 2360] gi|281408563|gb|EFB38821.1| NADH dehydrogenase (quinone) [Clostridium thermocellum JW20] gi|316940814|gb|ADU74848.1| NADH dehydrogenase (quinone) [Clostridium thermocellum DSM 1313] Length = 624 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C CPV + I +CI CG C C AI Sbjct: 576 CKGC--SKCARSCPVGAITGKVKEPFVIDQSKCIKCGACIETCAFHAI 621 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 9/21 (42%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I C C C CPV AI Sbjct: 571 IDASLCKGCSKCARSCPVGAI 591 >gi|312126857|ref|YP_003991731.1| hypothetical protein Calhy_0621 [Caldicellulosiruptor hydrothermalis 108] gi|311776876|gb|ADQ06362.1| protein of unknown function DUF362 [Caldicellulosiruptor hydrothermalis 108] Length = 375 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNACPAQAIEMKSRKAYVDLKKCIRCYCCHELCPAKAIK 363 >gi|303327686|ref|ZP_07358126.1| periplasmic [Fe] hydrogenase, large subunit [Desulfovibrio sp. 3_1_syn3] gi|302862047|gb|EFL84981.1| periplasmic [Fe] hydrogenase, large subunit [Desulfovibrio sp. 3_1_syn3] Length = 418 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKP 57 V E CI C C E CP Y G +P+ CI+CG C CP A+ Sbjct: 30 VDAEKCIGCD--TCQEYCPSGAIYGETGAAHEVAYPEACINCGQCLTHCPEFAVYE 83 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%) Query: 22 PVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 P + F+ + ++CI C C+ CP AI +T E Sbjct: 17 PQGADGDKMFFVQVDAEKCIGCDTCQEYCPSGAIYGETGAAHE 59 >gi|303245642|ref|ZP_07331925.1| NADH dehydrogenase (quinone) [Desulfovibrio fructosovorans JJ] gi|302492905|gb|EFL52770.1| NADH dehydrogenase (quinone) [Desulfovibrio fructosovorans JJ] Length = 491 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +TY + C C C VCPV+C + I CI CG C +C D+I Sbjct: 434 LTYTIDPAKCTGCGL--CTRVCPVECISGTKKQPHTIDTTRCIKCGACYDKCKFDSI 488 >gi|255003195|ref|ZP_05278159.1| NADH dehydrogenase subunit I [Anaplasma marginale str. Puerto Rico] gi|255004324|ref|ZP_05279125.1| NADH dehydrogenase subunit I [Anaplasma marginale str. Virginia] Length = 156 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 55 ERCIACKL--CEAICPAQAITIEAAERGDGSRRTVRYDIDMTKCIYCGFCQEACPVDAI 111 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 96 CIYCGF--CQEACPVDAIVEGPNFEY 119 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 + CI C +CE CP AI + Sbjct: 55 ERCIACKLCEAICPAQAITIE 75 >gi|256078649|ref|XP_002575607.1| NADH-ubiquinone oxidoreductase [Schistosoma mansoni] gi|238660849|emb|CAZ31840.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Schistosoma mansoni] Length = 169 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 105 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161 Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 105 ERCIACKLCEAICPAQAITIEAEPRAD 131 >gi|238020501|ref|ZP_04600927.1| hypothetical protein GCWU000324_00383 [Kingella oralis ATCC 51147] gi|237867481|gb|EEP68487.1| hypothetical protein GCWU000324_00383 [Kingella oralis ATCC 51147] Length = 304 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C+ C C++ CP + EN + H + CI CG C CP + + D + Sbjct: 97 DGCMHCADPGCLKACPSPGAIIQYENGIVDFHQENCIGCGYCIAGCPFNIPRMDKKEN 154 >gi|218888270|ref|YP_002437591.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759224|gb|ACL10123.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 177 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C C VCP D + + + + C C +C CP AI+ Sbjct: 64 CRQCADAPCARVCPTDALVQEDGVVVMRQQYCAACQLCVMACPYGAIE 111 >gi|213620710|ref|ZP_03373493.1| putative anaerobic dimethyl sulfoxide reductase, subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 131 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDT 59 TY ++ C C CV CP ++ + + + C+ C CE CP A + DT Sbjct: 59 TYYLSIACNHCDEPVCVSGCPTGAMHKRKEDGLVVVDDSVCVGCRYCEMRCPYGAPQFDT 118 Query: 60 EPG 62 + Sbjct: 119 QAN 121 >gi|126726681|ref|ZP_01742521.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Rhodobacterales bacterium HTCC2150] gi|126704010|gb|EBA03103.1| iron-sulfur-binding protein, RdxA/RdxB/FixG family [Rhodobacterales bacterium HTCC2150] Length = 471 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 18/84 (21%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLE 64 +CI C CV VCP+ EG+ ECI C +C C D I D GL Sbjct: 254 DCIDC--MACVNVCPMGIDIREGQQM------ECITCALCIDAC--DEIMDKIDRPRGLI 303 Query: 65 LWLKINSEYATQWPNITTKKESLP 88 +L + E P K P Sbjct: 304 DYLALADE-----PEERAGKPPKP 322 >gi|14521676|ref|NP_127152.1| formate dehydrogenase iron-sulfur subunit related protein [Pyrococcus abyssi GE5] gi|5458895|emb|CAB50382.1| Oxidoreductase iron-sulfur protein [Pyrococcus abyssi GE5] Length = 164 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + NC C+ C+EVCP Y +N +A P +CI C +C CP K D Sbjct: 42 IPFNCRHCERAPCLEVCPTGALYRDCDNAVAFDPLKCIGCLMCAVACPFGVPKLDE 97 >gi|16760455|ref|NP_456072.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141785|ref|NP_805127.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413573|ref|YP_150648.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62180046|ref|YP_216463.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167551571|ref|ZP_02345325.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168229833|ref|ZP_02654891.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235531|ref|ZP_02660589.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168819209|ref|ZP_02831209.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470589|ref|ZP_03076573.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738361|ref|YP_002114471.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250299|ref|YP_002146587.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362497|ref|YP_002142134.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200390591|ref|ZP_03217202.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927482|ref|ZP_03218683.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352829|ref|YP_002226630.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857038|ref|YP_002243689.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051628|ref|ZP_03344506.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213418458|ref|ZP_03351524.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425980|ref|ZP_03358730.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609896|ref|ZP_03369722.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649167|ref|ZP_03379220.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855036|ref|ZP_03383276.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584033|ref|YP_002637831.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911690|ref|ZP_04655527.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824890|ref|ZP_06544311.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|24638184|sp|Q8Z6R0|RNFB_SALTI RecName: Full=Electron transport complex protein rnfB gi|75505763|sp|Q57PH9|RNFB_SALCH RecName: Full=Electron transport complex protein rnfB gi|81677938|sp|Q5PIC0|RNFB_SALPA RecName: Full=Electron transport complex protein rnfB gi|226735425|sp|B5F6I9|RNFB_SALA4 RecName: Full=Electron transport complex protein rnfB gi|226735427|sp|B5QV01|RNFB_SALEP RecName: Full=Electron transport complex protein rnfB gi|226735428|sp|B5RAK1|RNFB_SALG2 RecName: Full=Electron transport complex protein rnfB gi|226735431|sp|B5BKB1|RNFB_SALPK RecName: Full=Electron transport complex protein rnfB gi|226735432|sp|B4TV18|RNFB_SALSV RecName: Full=Electron transport complex protein rnfB gi|254807926|sp|C0Q507|RNFB_SALPC RecName: Full=Electron transport complex protein rnfB gi|25316774|pir||AD0692 probable ferredoxin-like protein, cytoplasmic membrane STY1664 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502751|emb|CAD01909.1| putative ferredoxin-like protein, cytoplasmic membrane [Salmonella enterica subsp. enterica serovar Typhi] gi|29137413|gb|AAO68976.1| putative ferredoxin-like protein, cytoplasmic membrane [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127830|gb|AAV77336.1| putative ferredoxin-like protein, cytoplasmic membrane [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127679|gb|AAX65382.1| putative alternative beta subunit of Na+-transporting NADH:ubiquinone oxidoreductase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194456953|gb|EDX45792.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713863|gb|ACF93084.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197093974|emb|CAR59470.1| putative ferredoxin-like protein, cytoplasmic membrane [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214002|gb|ACH51399.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290969|gb|EDY30322.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603036|gb|EDZ01582.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322824|gb|EDZ08020.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272610|emb|CAR37519.1| putative electron transport complex protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323557|gb|EDZ11396.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205335259|gb|EDZ22023.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343637|gb|EDZ30401.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708841|emb|CAR33171.1| Electron transport complex protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468560|gb|ACN46390.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320086066|emb|CBY95840.1| Electron transport complex protein rnfB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616075|gb|EFY12991.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620524|gb|EFY17386.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622925|gb|EFY19767.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628768|gb|EFY25553.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631478|gb|EFY28236.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638813|gb|EFY35508.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641120|gb|EFY37763.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646613|gb|EFY43121.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650863|gb|EFY47254.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654537|gb|EFY50858.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658696|gb|EFY54954.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665218|gb|EFY61406.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667963|gb|EFY64123.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671625|gb|EFY67746.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677329|gb|EFY73393.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680008|gb|EFY76047.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685563|gb|EFY81559.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714516|gb|EFZ06087.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323194066|gb|EFZ79265.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198189|gb|EFZ83298.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202875|gb|EFZ87910.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205624|gb|EFZ90587.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211027|gb|EFZ95886.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217294|gb|EGA02014.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221948|gb|EGA06339.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323232169|gb|EGA16275.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234340|gb|EGA18427.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237791|gb|EGA21850.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242645|gb|EGA26666.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247768|gb|EGA31708.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254487|gb|EGA38299.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254811|gb|EGA38609.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323266728|gb|EGA50215.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268766|gb|EGA52225.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326627900|gb|EGE34243.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 192 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCIE 163 >gi|84516725|ref|ZP_01004083.1| NADH dehydrogenase subunit I [Loktanella vestfoldensis SKA53] gi|84509193|gb|EAQ05652.1| NADH dehydrogenase subunit I [Loktanella vestfoldensis SKA53] Length = 166 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 65 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 121 Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 65 ERCIACKLCEAVCPAQAITIDAEPRDD 91 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 106 CIYCGF--CQEACPVDAIVEGPNF 127 >gi|110633384|ref|YP_673592.1| NADH dehydrogenase subunit I [Mesorhizobium sp. BNC1] gi|122966121|sp|Q11JJ8|NUOI_MESSB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|110284368|gb|ABG62427.1| NADH dehydrogenase subunit I [Chelativorans sp. BNC1] Length = 163 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 19/85 (22%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Query: 56 ------KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 119 VEGPNFEFATETREELYYDKDKLLA 143 >gi|328473707|gb|EGF44542.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus 10329] Length = 553 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGQSPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|323698184|ref|ZP_08110096.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio sp. ND132] gi|323458116|gb|EGB13981.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio desulfuricans ND132] Length = 776 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 8 NCILCKHTD-CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECP 51 +C C+ C +CP + +G + PD+CI CG C CP Sbjct: 714 SCGSCRDCYICDTLCPQNAIKRNELPDGGFERVVDPDKCIACGFCADACP 763 >gi|320156338|ref|YP_004188717.1| iron-sulfur cluster-binding protein [Vibrio vulnificus MO6-24/O] gi|319931650|gb|ADV86514.1| iron-sulfur cluster-binding protein [Vibrio vulnificus MO6-24/O] Length = 552 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP + + + I+P C G C CP +AI Sbjct: 172 TDLCAHSSRGVKGCERCVDACPAGALTSQGSDKTGHHIEINPYLCQGVGTCATSCPTEAI 231 Query: 56 KPDTEPGLE--LWLK 68 E +++ Sbjct: 232 HYALPNPQETQKFIE 246 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T C LC CV VCP + L +C+ CG+C CP Sbjct: 416 TTGCTLC--MSCVAVCPTRALHTDGESPSLQFVEQDCVQCGLCTKACP 461 >gi|306817518|ref|ZP_07451262.1| pyridine nucleotide-disulfide oxidoreductase [Mobiluncus mulieris ATCC 35239] gi|307699830|ref|ZP_07636881.1| pyridine nucleotide-disulfide oxidoreductase [Mobiluncus mulieris FB024-16] gi|304649742|gb|EFM47023.1| pyridine nucleotide-disulfide oxidoreductase [Mobiluncus mulieris ATCC 35239] gi|307614868|gb|EFN94086.1| pyridine nucleotide-disulfide oxidoreductase [Mobiluncus mulieris FB024-16] Length = 550 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 NC C +C VCP + + D C CG+C ECP AI E Sbjct: 497 NCFGCD--NCFGVCPDNAIKKIKPTQYVFKYDYCKGCGICAEECPCGAIDMVLEAN 550 >gi|304311502|ref|YP_003811100.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] gi|301797235|emb|CBL45455.1| NADH dehydrogenase I, chain I [gamma proteobacterium HdN1] Length = 185 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CP C +G F I+ CI CG+CE CP AI+ Sbjct: 63 ERCVACNL--CAAACPAQCISLQKAERDDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 120 Query: 57 PDTEPGLELW 66 + + + Sbjct: 121 LTPDFEMAEF 130 >gi|295101884|emb|CBK99429.1| Uncharacterized Fe-S center protein [Faecalibacterium prausnitzii L2-6] Length = 374 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V + C C C + C D Y +N I D+C CG C C DAI + Sbjct: 192 VQEDLCRGC--HRCAKECGSDAIRYNEKNKAVIDQDKCKGCGRCIGACSFDAIYALCDSA 249 Query: 63 LELWLKINSEYAT 75 E+ + +EYA Sbjct: 250 NEMLDRKMAEYAA 262 >gi|228470926|ref|ZP_04055771.1| f420H2:quinone oxidoreductase [Porphyromonas uenonis 60-3] gi|228307323|gb|EEK16337.1| f420H2:quinone oxidoreductase [Porphyromonas uenonis 60-3] Length = 394 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPV 52 C C+ C +VCP +C EG + + + CI+C CE CP Sbjct: 10 CCGCE--ACRQVCPKECIRLERDEEGFGYPVVDLERCIECHKCERVCPF 56 >gi|237653622|ref|YP_002889936.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] gi|237624869|gb|ACR01559.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thauera sp. MZ1T] Length = 216 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C C VCP + + L I D CI C C CP +A Sbjct: 58 CQHCDEPPCETVCPTTATKKRADGLVTIDYDLCIGCAYCSVACPYNA 104 >gi|218705129|ref|YP_002412648.1| electron transport complex protein RnfB [Escherichia coli UMN026] gi|293405127|ref|ZP_06649119.1| electron transport complex protein RnfB [Escherichia coli FVEC1412] gi|293409939|ref|ZP_06653515.1| conserved hypothetical protein [Escherichia coli B354] gi|298380775|ref|ZP_06990374.1| electron transport complex protein rnfB [Escherichia coli FVEC1302] gi|300901565|ref|ZP_07119634.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 198-1] gi|301026784|ref|ZP_07190188.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 69-1] gi|331663100|ref|ZP_08364010.1| electron transport complex protein RnfB [Escherichia coli TA143] gi|226735416|sp|B7NB82|RNFB_ECOLU RecName: Full=Electron transport complex protein rnfB gi|218432226|emb|CAR13116.1| putative iron-sulfur protein [Escherichia coli UMN026] gi|291427335|gb|EFF00362.1| electron transport complex protein RnfB [Escherichia coli FVEC1412] gi|291470407|gb|EFF12891.1| conserved hypothetical protein [Escherichia coli B354] gi|298278217|gb|EFI19731.1| electron transport complex protein rnfB [Escherichia coli FVEC1302] gi|300355032|gb|EFJ70902.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 198-1] gi|300395322|gb|EFJ78860.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 69-1] gi|323968396|gb|EGB63802.1| electron transporter [Escherichia coli M863] gi|327252743|gb|EGE64397.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli STEC_7v] gi|331058899|gb|EGI30876.1| electron transport complex protein RnfB [Escherichia coli TA143] Length = 192 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 5/72 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--KPD 58 ++ NCI C T C++ CPVD + + D C C +C CP I +P Sbjct: 110 AFIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPV 167 Query: 59 TEPGLELWLKIN 70 E +N Sbjct: 168 AETPDSWKWDLN 179 >gi|153005757|ref|YP_001380082.1| electron-transferring-flavoprotein dehydrogenase [Anaeromyxobacter sp. Fw109-5] gi|152029330|gb|ABS27098.1| Electron-transferring-flavoprotein dehydrogenase [Anaeromyxobacter sp. Fw109-5] Length = 606 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPEC 50 T+ E C C CVE+C + GE+ + ++C+ CG C C Sbjct: 531 TFRSAETCRACGRRACVEICSAEALRPGEDGVPGFDREKCVHCGACLWSC 580 >gi|111018602|ref|YP_701574.1| Fe-S ferredoxin-type protein [Rhodococcus jostii RHA1] gi|110818132|gb|ABG93416.1| probable Fe-S ferredoxin-type protein [Rhodococcus jostii RHA1] Length = 110 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 VV + C+ C C++VCP D F G + + H ++C C +CE CP DA+ Sbjct: 5 VVADRCVQCD--ICIKVCPTDVFRRGTDGVPVVAHQEDCQTCFMCEANCPTDALY 57 >gi|33240385|ref|NP_875327.1| ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237912|gb|AAP99979.1| Ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 73 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE-------GENFLAIHPDECIDCGVCEPECPV- 52 M + + + ++CV+ CPVDC + G + I CIDCGVC CP+ Sbjct: 1 MPHSINSE-VCEGISECVKACPVDCIKQASGTNKKGTTYYFIDFSTCIDCGVCLSVCPIK 59 Query: 53 DAIKPDTEPGLEL 65 +A+ + P L+ Sbjct: 60 NAVVSEERPDLQQ 72 >gi|29346027|ref|NP_809530.1| ferredoxin [Bacteroides thetaiotaomicron VPI-5482] gi|253568565|ref|ZP_04845976.1| ferredoxin [Bacteroides sp. 1_1_6] gi|298385330|ref|ZP_06994888.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. 1_1_14] gi|29337921|gb|AAO75724.1| Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB [Bacteroides thetaiotaomicron VPI-5482] gi|251842638|gb|EES70718.1| ferredoxin [Bacteroides sp. 1_1_6] gi|298261471|gb|EFI04337.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. 1_1_14] Length = 293 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI----KPDTEP 61 T +CI C CV+ CP + N I P++C C C CP + I P +P Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPNKCKSCRKCVEVCPQNTIIELNFPPRKP 275 Query: 62 GLEL 65 E Sbjct: 276 KAEE 279 Score = 40.5 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|150390845|ref|YP_001320894.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] gi|149950707|gb|ABR49235.1| NADH dehydrogenase (quinone) [Alkaliphilus metalliredigens QYMF] Length = 582 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E CI C C+ C +D + I ++CI CGVC CPV+A+ Sbjct: 532 EKCINCGL--CLRKCRLDAIIRENHGAHRIQTEKCIQCGVCLDACPVNAV 579 >gi|323978823|gb|EGB73904.1| 4Fe-4S binding domain-containing protein [Escherichia coli TW10509] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVQALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|323180986|gb|EFZ66524.1| hypothetical protein ECOK1180_0282 [Escherichia coli 1180] Length = 184 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|326424121|ref|NP_761830.2| NrfC protein [Vibrio vulnificus CMCP6] gi|319999504|gb|AAO11357.2| NrfC protein [Vibrio vulnificus CMCP6] Length = 226 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 96 SCQHCENPPCVYVCPTGAAYKDEKTGIVDVHKEKCVGCGYCLAACPYQ 143 >gi|317486042|ref|ZP_07944896.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922720|gb|EFV43952.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 653 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C++VCP E GE C CG+C CP AI+ + Sbjct: 585 CVGCG--KCIKVCPFQAIVEKEIRGEKKAQTIEAVCQGCGLCTATCPQGAIQLSHFTDNQ 642 Query: 65 LWLKINS 71 + ++++ Sbjct: 643 ILAEVDA 649 Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 27/86 (31%), Gaps = 26/86 (30%) Query: 2 TYVVTENCILCKHTDCVEVCPV----DCFYE---------------GENFLAIHPDECID 42 TYV C C C++ CP D F E I+ + C Sbjct: 235 TYVDWSKCTGCG--ACMDKCPAKKTPDKFNEFVGPTTAINIPFPQAIPKKATINAEFCRK 292 Query: 43 -----CGVCEPECPVDAIKPDTEPGL 63 CGVC CP AI + + Sbjct: 293 LTSGKCGVCAKVCPTGAINYEMKDEE 318 Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 14/57 (24%) Query: 34 AIHPDECIDCGVCEPECPV--------------DAIKPDTEPGLELWLKINSEYATQ 76 + +C CG C +CP AI + IN+E+ + Sbjct: 236 YVDWSKCTGCGACMDKCPAKKTPDKFNEFVGPTTAINIPFPQAIPKKATINAEFCRK 292 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 10/26 (38%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ CG C CP AI Sbjct: 575 PQISVVDIKRCVGCGKCIKVCPFQAI 600 >gi|297617551|ref|YP_003702710.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophothermus lipocalidus DSM 12680] gi|297145388|gb|ADI02145.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Syntrophothermus lipocalidus DSM 12680] Length = 582 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MTYVVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 M YV E C C C+++ C + E E I+P+ C+ CG+C C +DAI Sbjct: 523 MYYVDEEACKGC--RLCIKIGCTGIYWIEEERIARINPNLCVGCGLCAQICKLDAI 576 >gi|317152091|ref|YP_004120139.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942342|gb|ADU61393.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 256 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVD 53 C CK+ CV VCP Y+ + + D CI C C CP Sbjct: 117 CNHCKNPPCVRVCPTKATYKRPDGIV-DMDYHRCIGCRYCMAGCPYG 162 >gi|262406412|ref|ZP_06082961.1| ferredoxin [Bacteroides sp. 2_1_22] gi|294643290|ref|ZP_06721116.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|294806484|ref|ZP_06765325.1| ferredoxin [Bacteroides xylanisolvens SD CC 1b] gi|262355115|gb|EEZ04206.1| ferredoxin [Bacteroides sp. 2_1_22] gi|292641413|gb|EFF59605.1| ferredoxin [Bacteroides ovatus SD CC 2a] gi|294446347|gb|EFG14973.1| ferredoxin [Bacteroides xylanisolvens SD CC 1b] Length = 317 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T +CI C CV+ CP + N I P +C C C CP ++I Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPHKCKSCRKCVEVCPQNSI 265 Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|288932414|ref|YP_003436474.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] gi|288894662|gb|ADC66199.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferroglobus placidus DSM 10642] Length = 320 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C+ CV+VCP + E + + I + CI C C CP A + + Sbjct: 176 CQQCEKPPCVKVCPTRATWKEPDGIIVIDYNWCIGCRYCMAACPYWARRFNWSWPYIPKE 235 Query: 68 KIN 70 +IN Sbjct: 236 EIN 238 >gi|251789021|ref|YP_003003742.1| NADH dehydrogenase subunit I [Dickeya zeae Ech1591] gi|271501261|ref|YP_003334286.1| NADH-quinone oxidoreductase subunit I [Dickeya dadantii Ech586] gi|247537642|gb|ACT06263.1| NADH-quinone oxidoreductase, chain I [Dickeya zeae Ech1591] gi|270344816|gb|ACZ77581.1| NADH-quinone oxidoreductase, chain I [Dickeya dadantii Ech586] Length = 180 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|170691834|ref|ZP_02882998.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia graminis C4D1M] gi|170143118|gb|EDT11282.1| electron transport complex, RnfABCDGE type, B subunit [Burkholderia graminis C4D1M] Length = 344 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD----TEPGL 63 CI C T C++ CPVD + + + C C +C P CPVD I G Sbjct: 128 CIGC--TLCMQACPVDAIVGAPKHMHTVVAELCTGCDLCVPPCPVDCISMQPVTGEATGW 185 Query: 64 ELWLKINSEYATQ 76 + W + ++ A + Sbjct: 186 DAWSQPKADAARE 198 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 122 VIDEHICIGCTLCMQACPVDAI 143 >gi|119872139|ref|YP_930146.1| putative ATPase RIL [Pyrobaculum islandicum DSM 4184] gi|119673547|gb|ABL87803.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] Length = 590 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 9/65 (13%) Query: 7 ENC--ILCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C +CV+ CPV+ E I CI CG+C +CP AI Sbjct: 10 DACQPRKCG-QECVKYCPVNKSGKVVYIDEQLKKAVISEALCIGCGICVHKCPFQAITIV 68 Query: 59 TEPGL 63 P Sbjct: 69 NLPDE 73 >gi|222054147|ref|YP_002536509.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] gi|221563436|gb|ACM19408.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. FRC-32] Length = 197 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 2/50 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 +C C DC+ CP + + C C +C CP DAI Sbjct: 57 SCRHCDPADCLNACPSGAICRDPESGAVVLDASLCKACAMCAMVCPFDAI 106 >gi|78185937|ref|YP_373980.1| polysulfide reductase, subunit B, putative [Chlorobium luteolum DSM 273] gi|78165839|gb|ABB22937.1| putative sulfite reductase-associated electron transfer protein DsrO [Chlorobium luteolum DSM 273] Length = 243 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C CV CP D + ++ + I CI C C CP Sbjct: 105 CNHCAEPSCVRACPTDSIFRRKDGIVAIDYHRCIGCRSCMLACPYG 150 >gi|37523338|ref|NP_926715.1| hypothetical protein gll3769 [Gloeobacter violaceus PCC 7421] gi|35214342|dbj|BAC91710.1| gll3769 [Gloeobacter violaceus PCC 7421] Length = 351 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + E C C+ +CPVD G I C CG C P CP+ I+ Sbjct: 94 AHFDAERCPSDCPRPCLRICPVDAIAAGG----IEALRCYGCGRCAPVCPLGLIEF 145 >gi|315452560|ref|YP_004072830.1| iron-sulfur cluster-binding domain-containing protein [Helicobacter felis ATCC 49179] gi|315131612|emb|CBY82240.1| iron-sulfur cluster-binding domain protein [Helicobacter felis ATCC 49179] Length = 468 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 31/95 (32%), Gaps = 23/95 (24%) Query: 17 CVEVCPVDCF--------------YEGENFLAIHPDECIDCGVCEPECPVDAIKP----- 57 C EVCP E L I CIDCG C CP ++ Sbjct: 117 CSEVCPTQAISKLDPQIAREKDLECEDNRHLVIDHQSCIDCGKCIAVCPSGSLSYSSFNL 176 Query: 58 ----DTEPGLELWLKINSEYATQWPNITTKKESLP 88 + ++ + + + PN KKE LP Sbjct: 177 ECMQEVAKLYRGYIPLLIDCKAELPNTPLKKEVLP 211 Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 4/49 (8%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECP 51 + +NC LC CV C N L +P C CG CE CP Sbjct: 333 IKDNCTLCL--SCVGACNTGALSVDGNAYTLLFNPSLCTTCGYCEATCP 379 >gi|311104715|ref|YP_003977568.1| electron transport complex, RnfABCDGE type subunit B [Achromobacter xylosoxidans A8] gi|310759404|gb|ADP14853.1| electron transport complex, RnfABCDGE type, B subunit [Achromobacter xylosoxidans A8] Length = 214 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 CI C T C++ CPVD + + D C C +C CPVD I+ P W Sbjct: 86 CIGC--TLCIQACPVDAIVGANKHMHTVLADWCTGCDLCVAPCPVDCIQ--MVPAGRAWS 141 Query: 68 KINSEYATQ 76 ++ + Q Sbjct: 142 AQDAAISRQ 150 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 81 IDEAHCIGCTLCIQACPVDAI 101 >gi|291614139|ref|YP_003524296.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] gi|291584251|gb|ADE11909.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sideroxydans lithotrophicus ES-1] Length = 238 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C C CV+VCP F + + + CI C C CP A EP Sbjct: 104 CQHCAEPPCVDVCPTAASFKRADGIVLVDRHRCIGCRYCMMACPYKARSFVHEP 157 >gi|253999624|ref|YP_003051687.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylovorus sp. SIP3-4] gi|253986303|gb|ACT51160.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylovorus sp. SIP3-4] Length = 83 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP +G I+P C +C C+ CPV Sbjct: 1 MALMITDECINCDV--CEPACPNGAISQGAEIYVINPALCTECVGHFDKPQCQDVCPVSC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPLDPD 64 >gi|225175901|ref|ZP_03729893.1| aldo/keto reductase [Dethiobacter alkaliphilus AHT 1] gi|225168489|gb|EEG77291.1| aldo/keto reductase [Dethiobacter alkaliphilus AHT 1] Length = 315 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 YVV + C C +CVE C + I CI CG C CP I+ Sbjct: 263 YVV-KFCKGCG--NCVESCEQGAISMVDEKAYIEHSNCILCGYCRKSCPHSMIR 313 >gi|117625117|ref|YP_854105.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli APEC O1] gi|218559878|ref|YP_002392791.1| oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli S88] gi|227888433|ref|ZP_04006238.1| 4Fe-4S binding protein [Escherichia coli 83972] gi|300980322|ref|ZP_07174976.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|301049332|ref|ZP_07196302.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|306812213|ref|ZP_07446411.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli NC101] gi|115514241|gb|ABJ02316.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli APEC O1] gi|218366647|emb|CAR04401.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli S88] gi|227834702|gb|EEJ45168.1| 4Fe-4S binding protein [Escherichia coli 83972] gi|281179891|dbj|BAI56221.1| putative oxidoreductase [Escherichia coli SE15] gi|294493750|gb|ADE92506.1| 4Fe-4S binding protein [Escherichia coli IHE3034] gi|300298931|gb|EFJ55316.1| 4Fe-4S binding domain protein [Escherichia coli MS 185-1] gi|300409330|gb|EFJ92868.1| 4Fe-4S binding domain protein [Escherichia coli MS 45-1] gi|305854251|gb|EFM54689.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli NC101] gi|307554862|gb|ADN47637.1| putative electron transport protein YgfS [Escherichia coli ABU 83972] gi|307625542|gb|ADN69846.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli UM146] gi|315289453|gb|EFU48848.1| 4Fe-4S binding domain protein [Escherichia coli MS 110-3] gi|315293883|gb|EFU53235.1| 4Fe-4S binding domain protein [Escherichia coli MS 153-1] gi|323951676|gb|EGB47551.1| 4Fe-4S binding domain-containing protein [Escherichia coli H252] gi|323957394|gb|EGB53116.1| 4Fe-4S binding domain-containing protein [Escherichia coli H263] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|157162346|ref|YP_001459664.1| 4Fe-4S binding protein [Escherichia coli HS] gi|188491838|ref|ZP_02999108.1| 4Fe-4S binding protein [Escherichia coli 53638] gi|194436779|ref|ZP_03068879.1| 4Fe-4S binding protein [Escherichia coli 101-1] gi|253772274|ref|YP_003035105.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|293412244|ref|ZP_06654967.1| 4Fe-4S ferredoxin [Escherichia coli B354] gi|297516963|ref|ZP_06935349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli OP50] gi|300925135|ref|ZP_07141049.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|312972874|ref|ZP_07787047.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|157068026|gb|ABV07281.1| 4Fe-4S binding protein [Escherichia coli HS] gi|188487037|gb|EDU62140.1| 4Fe-4S binding protein [Escherichia coli 53638] gi|194424261|gb|EDX40248.1| 4Fe-4S binding protein [Escherichia coli 101-1] gi|242378418|emb|CAQ33197.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BL21(DE3)] gi|253323318|gb|ACT27920.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|291469015|gb|EFF11506.1| 4Fe-4S ferredoxin [Escherichia coli B354] gi|300418737|gb|EFK02048.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|310332816|gb|EFQ00030.1| hydrogenase-4 component A [Escherichia coli 1827-70] gi|323960818|gb|EGB56439.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323971677|gb|EGB66906.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] gi|332344780|gb|AEE58114.1| hydrogenase-4 component A [Escherichia coli UMNK88] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|193070563|ref|ZP_03051502.1| 4Fe-4S binding protein [Escherichia coli E110019] gi|192956146|gb|EDV86610.1| 4Fe-4S binding protein [Escherichia coli E110019] Length = 162 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|323702340|ref|ZP_08114005.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532646|gb|EGB22520.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 206 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 2/55 (3%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + V E C C C VCPV + + C C CE CP AI Sbjct: 7 LAVVDNEKCRGC--RTCERVCPVLAIKMENRKAVVDNERCRGCANCEQRCPYYAI 59 Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPD 58 + ++C C CE CPV AIK + Sbjct: 9 VVDNEKCRGCRTCERVCPVLAIKME 33 >gi|269140136|ref|YP_003296837.1| formate-dependent nitrite reductase; Fe-S center [Edwardsiella tarda EIB202] gi|267985797|gb|ACY85626.1| formate-dependent nitrite reductase; Fe-S center [Edwardsiella tarda EIB202] gi|304559970|gb|ADM42634.1| NrfC [Edwardsiella tarda FL6-60] Length = 223 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C CV CP F + + + ++P+ C+ C C CP Sbjct: 91 SCQHCDDAPCVNACPTGASFRDAASGIVDVNPELCVGCQYCIAACPY 137 >gi|254439108|ref|ZP_05052602.1| NADH-quinone oxidoreductase, chain I subfamily [Octadecabacter antarcticus 307] gi|198254554|gb|EDY78868.1| NADH-quinone oxidoreductase, chain I subfamily [Octadecabacter antarcticus 307] Length = 168 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG CE CPVDAI Sbjct: 67 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCEEACPVDAI 123 Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 67 ERCIACKLCEAVCPAQAITIDAEPRDD 93 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 108 CIYCGF--CEEACPVDAIVEGPNF 129 >gi|192361907|ref|YP_001983090.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] gi|190688072|gb|ACE85750.1| iron-sulfur cluster-binding protein [Cellvibrio japonicus Ueda107] Length = 470 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV+VCPVD ECIDCG+C C Sbjct: 270 DCIDCSW--CVQVCPVDIDIRDGLQA-----ECIDCGLCVDAC 305 >gi|168463130|ref|ZP_02697061.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634204|gb|EDX52556.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 192 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIIGATRAMHTVMSDLCTGCNLCVDPCPTHCIE 163 >gi|164687856|ref|ZP_02211884.1| hypothetical protein CLOBAR_01500 [Clostridium bartlettii DSM 16795] gi|164603131|gb|EDQ96596.1| hypothetical protein CLOBAR_01500 [Clostridium bartlettii DSM 16795] Length = 333 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEG---ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 C+ CK C +VCP ++I +CI C C CP AI+ + + ++ Sbjct: 243 CVGCKV--CADVCPKKVIKADLSDRRKVSIDESKCIGCTACARTCPFGAIEGEKKQPHKV 300 Query: 66 WLK 68 L+ Sbjct: 301 DLE 303 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 CI CK C + CPV N I +C+ C VC CP IK D Sbjct: 214 CIGCK--KCEKSCPVGAITVENNLATIDYSKCVGCKVCADVCPKKVIKADL 262 Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VC + + D+C+ CG C CP I+ Sbjct: 146 CVSVCAFGALSIVDGVAVVDEDKCVLCGKCIDTCPKGLIQ 185 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 CI C T C CP EGE + ++C C +C +C DAIK Sbjct: 275 CIGC--TACARTCPFGAI-EGEKKQPHKVDLEKCKGCHLCMKKCKKDAIK 321 >gi|254975776|ref|ZP_05272248.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-66c26] gi|255093163|ref|ZP_05322641.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CIP 107932] gi|255314905|ref|ZP_05356488.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-76w55] gi|255517579|ref|ZP_05385255.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-97b34] gi|255650690|ref|ZP_05397592.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-37x79] gi|260683777|ref|YP_003215062.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CD196] gi|260687437|ref|YP_003218571.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile R20291] gi|306520615|ref|ZP_07406962.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile QCD-32g58] gi|260209940|emb|CBA63916.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile CD196] gi|260213454|emb|CBE05132.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile R20291] Length = 140 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C C+ CP +CF + E F+ + CI C +CE C A Sbjct: 54 ACIHCNEPKCLGACPKNCFKKEEGFVVLDNQNCIGCKLCEKACEYGA 100 >gi|90022063|ref|YP_527890.1| putative ferredoxin [Saccharophagus degradans 2-40] gi|89951663|gb|ABD81678.1| 4Fe-4S ferredoxin, iron-sulfur binding [Saccharophagus degradans 2-40] Length = 484 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 18/67 (26%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKP 57 +CI C CV+VCPVD +G F ECI+CG+C C P I+ Sbjct: 279 DCIDCSW--CVQVCPVDIDIRDGLQF------ECINCGLCVDACNAVMDKMEYPRGLIRF 330 Query: 58 DTEPGLE 64 +E LE Sbjct: 331 ASEDELE 337 >gi|77463679|ref|YP_353183.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides 2.4.1] gi|221639523|ref|YP_002525785.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides KD131] gi|110287770|sp|Q3J1Q2|NUOI2_RHOS4 RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|77388097|gb|ABA79282.1| NADH-quinone oxidoreductase, chain I, ferredoxin [Rhodobacter sphaeroides 2.4.1] gi|221160304|gb|ACM01284.1| NADH-quinone oxidoreductase subunit I 2 [Rhodobacter sphaeroides KD131] Length = 164 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E + I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAAACPVDCIDVVKAETPDGRWYPESFRINFARCIFCGYCEEACPTSAIQ 106 Query: 57 PDTEPGLELW 66 + L + Sbjct: 107 LTPDVELADY 116 >gi|238787508|ref|ZP_04631306.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia frederiksenii ATCC 33641] gi|238724295|gb|EEQ15937.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia frederiksenii ATCC 33641] Length = 173 Score = 50.5 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C CP G++ + + CI C C CP A Sbjct: 58 CHQCEDAPCENSCPNGAIVTGDHGVQVMASRCIGCKTCMLVCPFGA 103 >gi|307131807|ref|YP_003883823.1| NADH:ubiquinone oxidoreductase subunit I [Dickeya dadantii 3937] gi|306529336|gb|ADM99266.1| NADH:ubiquinone oxidoreductase, chain I [Dickeya dadantii 3937] Length = 180 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEMKDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|296102656|ref|YP_003612802.1| electron transport complex protein RnfB [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057115|gb|ADF61853.1| electron transport complex protein RnfB [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 192 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 4 VVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 V+ E NCI C T C++ CPVD + + D C C +C CP I+ Sbjct: 111 VIDEANCIGC--TKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQCIE 163 >gi|289422180|ref|ZP_06424037.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Peptostreptococcus anaerobius 653-L] gi|289157406|gb|EFD06014.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Peptostreptococcus anaerobius 653-L] Length = 595 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI CK C + CP F +I ++C+ C VC CPV AI Sbjct: 540 VDQDKCIGCK--KCTKTGCPAISFKTDIKKSSIDINKCVGCSVCAQVCPVGAI 590 >gi|253997114|ref|YP_003049178.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Methylotenera mobilis JLW8] gi|253983793|gb|ACT48651.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methylotenera mobilis JLW8] Length = 83 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP Y+GE I+PD C +C C+ CP+D Sbjct: 1 MALMITDECINCDV--CEPACPNTAIYQGEEIYEINPDLCTECVGHYDKPQCQQVCPIDC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPRDPD 64 >gi|227829891|ref|YP_002831670.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus L.S.2.15] gi|227456338|gb|ACP35025.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus L.S.2.15] Length = 612 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C C CP + I CI CG C P CP AI LE W Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAISLKGN-KLEKW 606 Query: 67 LKI 69 ++ Sbjct: 607 DEL 609 >gi|197105259|ref|YP_002130636.1| NADH dehydrogenase I, I subunit [Phenylobacterium zucineum HLK1] gi|196478679|gb|ACG78207.1| NADH dehydrogenase I, I subunit [Phenylobacterium zucineum HLK1] Length = 163 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIEAEPRADGSRRTTRYDIDMVKCIYCGLCQEACPVDAI 118 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 62 ERCIACKLCEAVCPAQAITIEAEPRAD 88 >gi|145634223|ref|ZP_01789934.1| uridylate kinase [Haemophilus influenzae PittAA] gi|145268667|gb|EDK08660.1| uridylate kinase [Haemophilus influenzae PittAA] Length = 225 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C + CV VCP F + E + +H D CI C C CP Sbjct: 92 QSCQHCTNAPCVAVCPTGASFIDKETGIVDVHKDLCIGCQYCIAVCPY 139 >gi|466365|gb|AAA87056.1| potential NAD-reducing hydrogenase subunit [Desulfovibrio fructosovorans] Length = 490 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 1 MTYVV-TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 +TY + C C C VCPV+C + I CI CG C +C D+I Sbjct: 433 LTYTIDPAKCTGCGL--CTRVCPVECISGTKKQPHTIDTTRCIKCGACYDKCKFDSI 487 >gi|148265397|ref|YP_001232103.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146398897|gb|ABQ27530.1| formate dehydrogenase (quinone-dependent) iron-sulfur subunit [Geobacter uraniireducens Rf4] Length = 258 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 7 ENCILCKHTDCVEVCP-VDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 E C+ C C++VCP Y + + + ++CI C C CP + + T+ Sbjct: 74 ERCMHCGDAGCMKVCPSPGALYRTKEGIVAFNREKCISCKYCVSACPFNIPRYGTDD 130 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 14/66 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG---------VCEPECPVDAIKP 57 E CI CK+ CV CP + G + +C CG C CP +I+ Sbjct: 107 EKCISCKY--CVSACPFNIPRYGTDDKV---SKCNLCGDRVAGGMPPACAKACPTQSIQF 161 Query: 58 DTEPGL 63 L Sbjct: 162 GNRAEL 167 >gi|110643034|ref|YP_670764.1| putative electron transport protein YgfS [Escherichia coli 536] gi|191173216|ref|ZP_03034747.1| 4Fe-4S binding protein [Escherichia coli F11] gi|300995684|ref|ZP_07181212.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|331659014|ref|ZP_08359956.1| putative electron transport protein YgfS [Escherichia coli TA206] gi|110344626|gb|ABG70863.1| putative electron transport protein YgfS [Escherichia coli 536] gi|190906467|gb|EDV66075.1| 4Fe-4S binding protein [Escherichia coli F11] gi|300304792|gb|EFJ59312.1| 4Fe-4S binding domain protein [Escherichia coli MS 200-1] gi|315295672|gb|EFU54992.1| 4Fe-4S binding domain protein [Escherichia coli MS 16-3] gi|324011766|gb|EGB80985.1| 4Fe-4S binding domain protein [Escherichia coli MS 60-1] gi|331053596|gb|EGI25625.1| putative electron transport protein YgfS [Escherichia coli TA206] Length = 162 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|332795704|ref|YP_004457204.1| 4Fe-4S ferredoxin, iron-sulfur binding domain-containing protein [Acidianus hospitalis W1] gi|332693439|gb|AEE92906.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Acidianus hospitalis W1] Length = 653 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 10/53 (18%) Query: 7 ENCILCKHTDCVEVCPV------DCFYEGENFLAIHPDECIDCGVCEPECPVD 53 + C CK C + CPV D +G + CI CG C CP + Sbjct: 586 DTCKSCKTIQCEDACPVKIPIRTDVISKG----YTNRISCIGCGDCVEACPYN 634 >gi|331648630|ref|ZP_08349718.1| putative electron transport protein YgfS [Escherichia coli M605] gi|331042377|gb|EGI14519.1| putative electron transport protein YgfS [Escherichia coli M605] Length = 163 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|323978232|gb|EGB73318.1| electron transporter [Escherichia coli TW10509] Length = 192 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 5/72 (6%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--KPD 58 ++ NCI C T C++ CPVD + + D C C +C CP I +P Sbjct: 110 AFIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPV 167 Query: 59 TEPGLELWLKIN 70 E +N Sbjct: 168 AETPDSWKWDLN 179 >gi|251791854|ref|YP_003006574.1| cytochrome c nitrite reductase, Fe-S protein [Aggregatibacter aphrophilus NJ8700] gi|247533241|gb|ACS96487.1| cytochrome c nitrite reductase, Fe-S protein [Aggregatibacter aphrophilus NJ8700] Length = 225 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPV 52 ++C C + CV VCP + +H D C+ C C CP Sbjct: 92 QSCQHCTNAPCVAVCPTGASFIDPDTGIVDVHKDLCVGCQYCVAVCPY 139 >gi|261379572|ref|ZP_05984145.1| NADH dehydrogenase, I subunit [Neisseria subflava NJ9703] gi|269214461|ref|ZP_05986605.2| NADH dehydrogenase, I subunit [Neisseria lactamica ATCC 23970] gi|296313738|ref|ZP_06863679.1| NADH dehydrogenase, I subunit [Neisseria polysaccharea ATCC 43768] gi|313669276|ref|YP_004049560.1| NADH dehydrogenase I chain I [Neisseria lactamica ST-640] gi|261391783|emb|CAX49238.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I; NDH-1, chain I) [Neisseria meningitidis 8013] gi|269209739|gb|EEZ76194.1| NADH dehydrogenase, I subunit [Neisseria lactamica ATCC 23970] gi|284798046|gb|EFC53393.1| NADH dehydrogenase, I subunit [Neisseria subflava NJ9703] gi|296839661|gb|EFH23599.1| NADH dehydrogenase, I subunit [Neisseria polysaccharea ATCC 43768] gi|308388470|gb|ADO30790.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha710] gi|313006738|emb|CBN88208.1| NADH dehydrogenase I chain I [Neisseria lactamica 020-06] gi|325130978|gb|EGC53705.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis OX99.30304] Length = 159 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|224368543|ref|YP_002602706.1| HdrA3 [Desulfobacterium autotrophicum HRM2] gi|223691259|gb|ACN14542.1| HdrA3 [Desulfobacterium autotrophicum HRM2] Length = 418 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEG-----ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CILC C +VCP + + + C CG C CP AI + + Sbjct: 119 CILCG--RCEKVCPENAVSPTICHALPRTFLVDINACTGCGKCVAVCPTHAIDLERKQDR 176 Query: 64 ELWLKINSEYATQW 77 L N +AT + Sbjct: 177 IKILAENIIWATGF 190 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 14/23 (60%) Query: 35 IHPDECIDCGVCEPECPVDAIKP 57 I P CI CG CE CP +A+ P Sbjct: 114 IDPGRCILCGRCEKVCPENAVSP 136 >gi|269863882|ref|XP_002651380.1| RNase L inhibitor [Enterocytozoon bieneusi H348] gi|220064638|gb|EED42677.1| RNase L inhibitor [Enterocytozoon bieneusi H348] Length = 288 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 4 VVTENCI--LCKHTDCVEVCPVDCF----YEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C +C CPV+ E + CI CG CE +CP +AI Sbjct: 16 VNEELCKPDKC-AAECKRYCPVNRIGKKCIEIPKKAVVDETLCIGCGQCEKKCPFNAI 72 >gi|192293097|ref|YP_001993702.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris TIE-1] gi|192286846|gb|ACF03227.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris TIE-1] Length = 173 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C ++ CI CG CE CP AI+ Sbjct: 51 ERCVACNL--CATVCPVGCIDLAKAVADDGRWYPEHFRVNFARCIFCGFCEDACPTAAIQ 108 Query: 57 PDTEPGLELW 66 + L W Sbjct: 109 LTPDYELSEW 118 >gi|157962856|ref|YP_001502890.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella pealeana ATCC 700345] gi|157847856|gb|ABV88355.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella pealeana ATCC 700345] Length = 190 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 +C C++ CV+VCP Y ++ + I+ +C+ C C CP I P+T + Sbjct: 59 SCEQCENAPCVKVCPTGAAYVNDDGIVSINEKKCVGCLYCVAACPYKVRFINPETRVPDK 118 >gi|145590102|ref|YP_001156699.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048508|gb|ABP35135.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 88 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 10/73 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP D Y G I P +C +C C CPVD Sbjct: 1 MALLITDECINCDV--CEPECPNDAIYMGLEIYEIDPAKCTECVGHYDAPQCRQVCPVDC 58 Query: 55 I--KPDTEPGLEL 65 I PD + Sbjct: 59 IPFHPDYVESQDQ 71 >gi|91202796|emb|CAJ72435.1| similar to sodium dependent NADH:ubiquinone oxidoreductase RnfB [Candidatus Kuenenia stuttgartiensis] Length = 274 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 ++CI CK C + CP D + N I +C CG C CP I Sbjct: 212 DSCIACK--RCEKECPYDAIHVQNNLAVIDYQKCTSCGKCVDVCPNHTI 258 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIH----------------PDECIDCGVCE 47 V+ E C C C EVCP + +H D CI C CE Sbjct: 164 VIRERCTGCG--KCAEVCPREIISILPESKMVHVRCKSLDKGAVAKKICQDSCIACKRCE 221 Query: 48 PECPVDAIK 56 ECP DAI Sbjct: 222 KECPYDAIH 230 Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 17 CVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 CVE C + Y G++ L + + C CG C CP + I Sbjct: 145 CVEACKFEAMYMGKDGLPKVIRERCTGCGKCAEVCPREII 184 >gi|16125654|ref|NP_420218.1| ferredoxin [Caulobacter crescentus CB15] gi|221234408|ref|YP_002516844.1| polyferredoxin protein fixG [Caulobacter crescentus NA1000] gi|13422764|gb|AAK23386.1| ferredoxin, putative [Caulobacter crescentus CB15] gi|220963580|gb|ACL94936.1| polyferredoxin protein fixG [Caulobacter crescentus NA1000] Length = 496 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 16/64 (25%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKPD 58 +CI C CV VCP+ + L ECI+CG+C C P I D Sbjct: 282 DCIDC--RQCVVVCPMGIDIRDGSQL-----ECINCGLCVDACDDILGKLGRPTGLIAYD 334 Query: 59 TEPG 62 T+ Sbjct: 335 TDAA 338 >gi|16764806|ref|NP_460421.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161614123|ref|YP_001588088.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167994289|ref|ZP_02575381.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240974|ref|ZP_02665906.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264619|ref|ZP_02686592.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194448094|ref|YP_002045496.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197265920|ref|ZP_03165994.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244365|ref|YP_002215677.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|24638186|sp|Q8ZPM1|RNFB_SALTY RecName: Full=Electron transport complex protein rnfB gi|189043388|sp|A9N024|RNFB_SALPB RecName: Full=Electron transport complex protein rnfB gi|226735426|sp|B5FIE6|RNFB_SALDC RecName: Full=Electron transport complex protein rnfB gi|226735429|sp|B4THD5|RNFB_SALHS RecName: Full=Electron transport complex protein rnfB gi|16419979|gb|AAL20380.1| putative alternative beta subunit of Na+-transporting NADH:ubiquinone oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161363487|gb|ABX67255.1| hypothetical protein SPAB_01862 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194406398|gb|ACF66617.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197244175|gb|EDY26795.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938881|gb|ACH76214.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205327845|gb|EDZ14609.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339698|gb|EDZ26462.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205346940|gb|EDZ33571.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246662|emb|CBG24472.1| Electron transport complex protein rnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993348|gb|ACY88233.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157991|emb|CBW17486.1| Electron transport complex protein rnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912441|dbj|BAJ36415.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224077|gb|EFX49140.1| Electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129728|gb|ADX17158.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623423|gb|EGE29768.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988343|gb|AEF07326.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 192 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCIE 163 >gi|91975993|ref|YP_568652.1| thiamine pyrophosphate enzyme-like TPP-binding [Rhodopseudomonas palustris BisB5] gi|91682449|gb|ABE38751.1| phenylglyoxylate:acceptor oxidoreductase PadI subunit [Rhodopseudomonas palustris BisB5] Length = 442 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVDAIKPDTEPG 62 C C CV VCP + + I +C+DC +C C I D G Sbjct: 54 CRQCGDPKCVTVCPAGALAKDGDTGVIGWDAGKCVDCLLCTVGCAYAGIARDETDG 109 >gi|28898284|ref|NP_797889.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|153837769|ref|ZP_01990436.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AQ3810] gi|254229544|ref|ZP_04922957.1| Ferredoxin [Vibrio sp. Ex25] gi|260361866|ref|ZP_05774875.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus K5030] gi|260878621|ref|ZP_05890976.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AN-5034] gi|260896153|ref|ZP_05904649.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus Peru-466] gi|262394268|ref|YP_003286122.1| iron-sulfur cluster-binding protein [Vibrio sp. Ex25] gi|28806501|dbj|BAC59773.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748874|gb|EDM59709.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AQ3810] gi|151937917|gb|EDN56762.1| Ferredoxin [Vibrio sp. Ex25] gi|262337862|gb|ACY51657.1| iron-sulfur cluster-binding protein [Vibrio sp. Ex25] gi|308086193|gb|EFO35888.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus Peru-466] gi|308091268|gb|EFO40963.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AN-5034] gi|308111393|gb|EFO48933.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus K5030] Length = 553 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGQSPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|330898583|gb|EGH30002.1| electron transport complex, RnfABCDGE type, B subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 291 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECP 51 ++ CI C T C++ CPVD I DEC C +C CP Sbjct: 84 AFIREAECIGC--TKCIQACPVDAILGASRLMHTVII-DECTGCDLCVAPCP 132 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 12/22 (54%) Query: 34 AIHPDECIDCGVCEPECPVDAI 55 I ECI C C CPVDAI Sbjct: 85 FIREAECIGCTKCIQACPVDAI 106 >gi|317487472|ref|ZP_07946258.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] gi|316921261|gb|EFV42561.1| indolepyruvate ferredoxin oxidoreductase [Bilophila wadsworthia 3_1_6] Length = 591 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Query: 4 VVTENCILCKHTDCVEV-CPV----DCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 V + CI C C++ CP D + G+ I P C+ CGVC CPV AI Sbjct: 529 VDADKCIACG--KCIQSGCPSVVLSDAVHPKTGKRKARIEPVTCVGCGVCSQICPVQAI 585 >gi|312880828|ref|ZP_07740628.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Aminomonas paucivorans DSM 12260] gi|310784119|gb|EFQ24517.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Aminomonas paucivorans DSM 12260] Length = 590 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 4 VVTEN-CILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 VV ++ C+ CK C+ CP +G + I P +C CG+C CP AI + E Sbjct: 533 VVDQSTCVKCK--SCLRPGCPGIAMKDG--VIVIDPAQCNGCGLCMQLCPKQAISREGE 587 >gi|288961355|ref|YP_003451694.1| protein [Azospirillum sp. B510] gi|288913663|dbj|BAI75150.1| protein [Azospirillum sp. B510] Length = 507 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 18/62 (29%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC---------PVDAIKP 57 +CI C H CV+VCP +G ECI CG+C C P D I+ Sbjct: 280 DCIDCGH--CVQVCPTGIDIRDGIQM------ECIGCGLCVDACNDVMARIGRPGDLIRF 331 Query: 58 DT 59 DT Sbjct: 332 DT 333 >gi|325980919|ref|YP_004293321.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosomonas sp. AL212] gi|325530438|gb|ADZ25159.1| electron transport complex, RnfABCDGE type, B subunit [Nitrosomonas sp. AL212] Length = 227 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CPVD + + DEC C +C CP+D I Sbjct: 86 CIGC--TFCIQSCPVDAIVGAAKQMHTVITDECTGCDLCVTPCPMDCI 131 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+T+ C C CV CP+DC Sbjct: 108 MHTVITDECTGCDL--CVTPCPMDCISM 133 Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I + CI C C CPVDAI Sbjct: 81 IDENLCIGCTFCIQSCPVDAI 101 >gi|237747267|ref|ZP_04577747.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378618|gb|EEO28709.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 260 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 E+C +C C ++CPV + + CI CG C CP + Sbjct: 185 GEDCNVCG--TCAQICPVHAITVSDTKTQTDENLCISCGACITACPSE 230 >gi|257789890|ref|YP_003180496.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|257473787|gb|ACV54107.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] Length = 190 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 Y + +C C + +CV VCP Y+ ++ + + +CI C C CP DT Sbjct: 53 YYLPVSCQHCDNPECVSVCPTGASYKRDDGVVLVDHSKCIGCQYCVMACPYGVRAYDT 110 >gi|218883519|ref|YP_002427901.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfurococcus kamchatkensis 1221n] gi|218765135|gb|ACL10534.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfurococcus kamchatkensis 1221n] Length = 160 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 17 CVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIK 56 CV CP + + + ++PD+CI CGVC +CP AI Sbjct: 45 CVSACPFNAISKSRIYEVPRLNPDKCIGCGVCVGKCPGLAIF 86 >gi|254486059|ref|ZP_05099264.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Roseobacter sp. GAI101] gi|214042928|gb|EEB83566.1| benzoyl-CoA oxygenase/reductase, BoxA protein [Roseobacter sp. GAI101] Length = 390 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 11/94 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP----DTEPG 62 E CI C C CPV +N + ++ D C C C P CP +I DT Sbjct: 13 EICIRC--YTCEMTCPVGAIEHDDNNVVVNFDTCNFCMDCIPVCPTGSIDEWRVVDTPYS 70 Query: 63 LELWLKINSEYATQWPNITTKKESLPSAAKMDGV 96 LE +++ + P+ + + PS + D + Sbjct: 71 LEQQYEMD-----ELPDQEDIEVATPSGDEADPI 99 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI C CE CPV AI+ D Sbjct: 10 IDPEICIRCYTCEMTCPVGAIEHDDN 35 >gi|150008159|ref|YP_001302902.1| putative nitroreductase [Parabacteroides distasonis ATCC 8503] gi|255015113|ref|ZP_05287239.1| putative nitroreductase [Bacteroides sp. 2_1_7] gi|149936583|gb|ABR43280.1| putative nitroreductase [Parabacteroides distasonis ATCC 8503] Length = 286 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C CV VCP D F + GE + + CI CG C CP ++ P Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSVSHSEFPPE 65 Query: 64 E 64 + Sbjct: 66 K 66 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L I + CI CG C CP D I G Sbjct: 3 LNIDQESCIKCGKCVRVCPSD-IFTQERAGE 32 >gi|41406467|ref|NP_959303.1| hypothetical protein MAP0369 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394816|gb|AAS02686.1| hypothetical protein MAP_0369 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 324 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIK 56 ++ C C H C++VCP + E + + D C CG C CP ++ Sbjct: 127 SDVCKHCTHAGCLDVCPTGALFRTEFGTVVVQHDVCNGCGTCVAGCPFGVVE 178 >gi|327401004|ref|YP_004341843.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316512|gb|AEA47128.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Archaeoglobus veneficus SNP6] Length = 254 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V + C C C E+CP + + I D CI CG C CP +AI+ Sbjct: 169 VNDDACQGCGV--CCEICPSMAISLQDPSKSVEIDEDRCIYCGACSNACPTNAIE 221 Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T C + CP + G + CI CG C CP +AI + Sbjct: 119 TVCKDSCPRNAIMLGGRMR--DDELCIYCGACSKACPEEAIYVEKP 162 Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAIKPDTE 60 E CI C C + CP + Y + F + ++ D C CGVC CP AI Sbjct: 140 ELCIYCG--ACSKACPEEAIYVEKPFSGSVIVNDDACQGCGVCCEICPSMAISLQDP 194 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 10/57 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--------LAIHPDECIDCGVCEPECPVDAI 55 + C+ C+ C CP + + I + CI CG+C C ++AI Sbjct: 33 QRCVGCEL--CSTACPKNAIKLNPPASVKLGYPPVVIDAETCILCGICSEVCLLNAI 87 >gi|325660837|ref|ZP_08149465.1| hypothetical protein HMPREF0490_00197 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085429|ref|ZP_08334514.1| hypothetical protein HMPREF0987_00817 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472911|gb|EGC76121.1| hypothetical protein HMPREF0490_00197 [Lachnospiraceae bacterium 4_1_37FAA] gi|330407667|gb|EGG87165.1| hypothetical protein HMPREF0987_00817 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 207 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 Y +T C CK C VCP +C I + C+ CG C CP A+ Sbjct: 153 YEITHKCNGCK--ACQSVCPQNCIDFTIIPAVIRQENCLHCGNCLSICPQKAV 203 >gi|323169186|gb|EFZ54862.1| electron transport complex, RnfABCDGE type, B subunit [Shigella sonnei 53G] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|320641983|gb|EFX11347.1| electron transport complex protein RnfB [Escherichia coli O157:H7 str. G5101] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK-- 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 --PDTEPGLEL 65 +T + Sbjct: 166 QVAETPDSWKW 176 >gi|296134413|ref|YP_003641660.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermincola sp. JR] gi|296032991|gb|ADG83759.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Thermincola potens JR] Length = 591 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 4 VVTENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V CI CK C+++ CP G ++++ C CG+C C V AI+ + E Sbjct: 535 VDAGACIGCK--RCMKLGCP--ALVAGPEKVSVNAALCTGCGLCAQTCNVGAIRKEGE 588 >gi|293370286|ref|ZP_06616843.1| putative ferredoxin-type protein NapF [Bacteroides ovatus SD CMC 3f] gi|292634581|gb|EFF53113.1| putative ferredoxin-type protein NapF [Bacteroides ovatus SD CMC 3f] Length = 514 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 417 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 476 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 477 CPARPFRAIYIEGNPVQKE 495 Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 20/63 (31%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECI------DCGVCEPECPV 52 +C +C VCP ++ + CI CG C CP Sbjct: 391 DCTVCGD-----VCPNGAILPISVEQKHLTQMGYVVFIEENCIVYTDGTSCGACSEHCPT 445 Query: 53 DAI 55 A+ Sbjct: 446 QAV 448 >gi|293396259|ref|ZP_06640538.1| electron transport complex protein RnfB [Serratia odorifera DSM 4582] gi|291421239|gb|EFE94489.1| electron transport complex protein RnfB [Serratia odorifera DSM 4582] Length = 191 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 109 AFIDEANCIGC--TKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE 162 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Query: 18 VEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D E I CI C C CPVDAI Sbjct: 90 VEPQPLDGGEEVAQPTRKVAFIDEANCIGCTKCIQACPVDAI 131 >gi|260899671|ref|ZP_05908066.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AQ4037] gi|308109467|gb|EFO47007.1| iron-sulfur cluster-binding protein [Vibrio parahaemolyticus AQ4037] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTHALHTDGQSPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|229497131|ref|ZP_04390834.1| ferredoxin [Porphyromonas endodontalis ATCC 35406] gi|229315948|gb|EEN81878.1| ferredoxin [Porphyromonas endodontalis ATCC 35406] Length = 320 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 20/58 (34%), Gaps = 2/58 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 CI C C + CP N I +C C C CP AI + P + Sbjct: 219 ACIGCG--KCAKECPFGAITVENNLAYIDHTKCRLCRKCVAVCPTHAIHEENFPPRKP 274 Score = 37.4 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%) Query: 15 TDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIK 56 DC + C D + + D+C CG C CP I+ Sbjct: 145 GDCADSCGFDALHMDATTGLPVVDQDKCTSCGACVKACPKTIIE 188 >gi|226356948|ref|YP_002786688.1| polyferredoxin [Deinococcus deserti VCD115] gi|226318938|gb|ACO46934.1| putative polyferredoxin [Deinococcus deserti VCD115] Length = 341 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 7/61 (11%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 V E CI C C VCP + +G L + C C C CP AI Sbjct: 264 VDEKCIDC--PVCANVCPTEAITRDLQPDGGVRLLLDLSACTGCMACLHSCPPGAIYAQD 321 Query: 60 E 60 E Sbjct: 322 E 322 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 16 DCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C CP G + I PD C CG+C CP A++ +P L+ Sbjct: 36 ACHTTCPHQAVNLGPLGASIQIDPDLCTGCGLCVQVCPTGALEYGLQPALQ 86 Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPG 62 ++CIDC VC CP +AI D +P Sbjct: 266 EKCIDCPVCANVCPTEAITRDLQPD 290 >gi|329955641|ref|ZP_08296549.1| 4Fe-4S binding domain protein [Bacteroides clarus YIT 12056] gi|328526044|gb|EGF53068.1| 4Fe-4S binding domain protein [Bacteroides clarus YIT 12056] Length = 277 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E C C + C CP +G+ ++CI C C CP A DT Sbjct: 205 VDAELCNHCGY--CAAHCPAGAIAKGDECNT-DAEKCIRCCACVKGCPQKARTFDTP 258 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 12/33 (36%) Query: 28 EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 A+ + C CG C CP AI E Sbjct: 198 PTPRIPAVDAELCNHCGYCAAHCPAGAIAKGDE 230 >gi|323188717|gb|EFZ74002.1| hydrogenase-4 component A [Escherichia coli RN587/1] Length = 162 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|317055057|ref|YP_004103524.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Ruminococcus albus 7] gi|315447326|gb|ADU20890.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Ruminococcus albus 7] Length = 603 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 TE CI C+ + CP +G +AI C CG+C CPV+AI Sbjct: 549 TEKCINCQKCKNLLGCPGLVLRDG--KIAIEESLCTGCGLCAQVCPVNAI 596 >gi|168212642|ref|ZP_02638267.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens CPE str. F4969] gi|170715827|gb|EDT28009.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens CPE str. F4969] Length = 273 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C C++VCP++ ++ I+ ECI C C ECPV A++ Sbjct: 226 DKCIKCG--KCLKVCPMNVEVNKDSRKRINATECILCYECVKECPVKALR 273 Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 15/76 (19%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPVDAI 55 + +V+ +N CK+ +CPV F + ++ +I H D+CI CG C CP++ Sbjct: 189 LAFVLKDNRAFCKY-----ICPVTVFLKPMSYYSIIRVHCHEDKCIKCGKCLKVCPMN-- 241 Query: 56 KPDTEPGLELWLKINS 71 E + +IN+ Sbjct: 242 ---VEVNKDSRKRINA 254 >gi|168204376|ref|ZP_02630381.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens E str. JGS1987] gi|170664130|gb|EDT16813.1| putative 4Fe-4S ferredoxin, iron-sulfur binding [Clostridium perfringens E str. JGS1987] Length = 273 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CI C C++VCP++ ++ I+ ECI C C ECPV A++ Sbjct: 226 DKCIKCG--KCLKVCPMNVEVNKDSRKRINATECILCYECVKECPVKALR 273 Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 15/76 (19%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPVDAI 55 + +V+ +N CK+ +CPV F + ++ +I + D+CI CG C CP++ Sbjct: 189 LAFVLKDNRAFCKY-----ICPVTVFLKPMSYYSIIRVHCNEDKCIKCGKCLKVCPMN-- 241 Query: 56 KPDTEPGLELWLKINS 71 E + +IN+ Sbjct: 242 ---VEVNKDSRKRINA 254 >gi|148827168|ref|YP_001291921.1| formate dehydrogenase accessory protein [Haemophilus influenzae PittGG] gi|148718410|gb|ABQ99537.1| formate dehydrogenase accessory protein [Haemophilus influenzae PittGG] Length = 548 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 + C+ C C++ CP + N + D+CI CG C CP + Sbjct: 104 DGCMHCTEPGCLKACPAPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFN 152 >gi|148265954|ref|YP_001232660.1| nitrite and sulphite reductase 4Fe-4S region [Geobacter uraniireducens Rf4] gi|146399454|gb|ABQ28087.1| nitrite and sulphite reductase 4Fe-4S region [Geobacter uraniireducens Rf4] Length = 315 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDA 54 E CI C C + C G++ D+CI CG C CP +A Sbjct: 171 EECISCGL--CAKSCTEGAIAMGDDGKPVFRADKCIYCGDCVKVCPTEA 217 Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%) Query: 11 LCKHTDCVEVCP----VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C CP D ++G + + +ECI CG+C C AI + Sbjct: 140 KVGFAGCPFDCPKSATNDVGFQGAIWPELSKEECISCGLCAKSCTEGAIAMGDD 193 >gi|78043445|ref|YP_360076.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995560|gb|ABB14459.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 368 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 2/59 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 V E C C C CP I+ + CI CG C C AIK + + Sbjct: 190 VNAEICTGC--RKCARWCPAQAISYENGKAVINYELCIGCGECTVTCNYHAIKINWKDE 246 >gi|134299512|ref|YP_001113008.1| NADH dehydrogenase (quinone) [Desulfotomaculum reducens MI-1] gi|134052212|gb|ABO50183.1| NADH dehydrogenase (quinone) [Desulfotomaculum reducens MI-1] Length = 627 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y+ E C C T C VCP E + I+ D C+ CG C +C +I+ Sbjct: 573 YINPEKCKGC--TVCSRVCPAGAITGEKKQPHVINVDLCLKCGACMEKCKFGSIE 625 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Query: 21 CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 CP + I+P++C C VC CP AI + + Sbjct: 561 CPAGA-CQALKEYYINPEKCKGCTVCSRVCPAGAITGEKKQPH 602 >gi|148826320|ref|YP_001291073.1| Fe-S-cluster-containing hydrogenase subunit NrfC [Haemophilus influenzae PittEE] gi|229846097|ref|ZP_04466209.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Haemophilus influenzae 7P49H1] gi|148716480|gb|ABQ98690.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Haemophilus influenzae PittEE] gi|229811101|gb|EEP46818.1| NrfC, Fe-S-cluster-containing hydrogenase component 1 [Haemophilus influenzae 7P49H1] gi|309973461|gb|ADO96662.1| Nitrite reductase complex, Fe-S subunit NrfC [Haemophilus influenzae R2846] Length = 225 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C + CV VCP F + E + +H D CI C C CP Sbjct: 92 QSCQHCTNAPCVAVCPTGASFIDKETGIVDVHKDLCIGCQYCIAVCPY 139 >gi|323270990|gb|EGA54422.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 138 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 11 LCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ G Sbjct: 2 HCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSAKGH 55 >gi|320165166|gb|EFW42065.1| mitochondrial NADH:ubiquinone oxidoreductase complex I [Capsaspora owczarzaki ATCC 30864] Length = 230 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 129 ERCIACKL--CEAICPAMAITIEAEPRADGSRRTTRYDIDLTKCIYCGFCQEACPVDAI 185 Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA 34 CI C C E CPVD EG NF Sbjct: 170 CIYCGF--CQEACPVDAIVEGPNFEY 193 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 129 ERCIACKLCEAICPAMAITIEAEPRAD 155 >gi|294140408|ref|YP_003556386.1| NADH dehydrogenase I subunit I [Shewanella violacea DSS12] gi|293326877|dbj|BAJ01608.1| NADH dehydrogenase I, I subunit [Shewanella violacea DSS12] Length = 184 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 12/88 (13%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E + I+ CI CG CE CP AI+ Sbjct: 62 ERCVACNL--CSVACPVDCISVEKTEKPDGRWEAKTFTINFSRCIMCGFCEEACPTHAIQ 119 Query: 57 PDTEPGLELWLKINSEYATQWPNITTKK 84 + + + + N Y I+ Sbjct: 120 LTPDFEMAEYDRQNLVYEKHHLLISGPG 147 >gi|262171465|ref|ZP_06039143.1| iron-sulfur cluster-binding protein [Vibrio mimicus MB-451] gi|261892541|gb|EEY38527.1| iron-sulfur cluster-binding protein [Vibrio mimicus MB-451] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|256829783|ref|YP_003158511.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578959|gb|ACU90095.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfomicrobium baculatum DSM 4028] Length = 173 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 V C C + DC+ CP E+ +H D+C CG C CP I+ Sbjct: 49 VPSVCFQCANPDCLAACPEGAIRHDESGTVLVHTDKCTGCGGCVDACPWGQIR 101 Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V T+ C C CV+ CP G +AI D C C EC +A+ Sbjct: 80 VHTDKCTGCGG--CVDACPWGQIRMGAKNVAIKCDLCGGEPSCVAECSAEALVFTEPDKD 137 >gi|229826962|ref|ZP_04453031.1| hypothetical protein GCWU000182_02346 [Abiotrophia defectiva ATCC 49176] gi|229788580|gb|EEP24694.1| hypothetical protein GCWU000182_02346 [Abiotrophia defectiva ATCC 49176] Length = 286 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 E CI C + CV++CP C + + DECI C C CP A Sbjct: 213 EKCINC--SKCVKICPKSCIN--PDMSTV-KDECIVCMACVKICPTGA 255 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 3/38 (7%) Query: 25 CFYEGENFLAI---HPDECIDCGVCEPECPVDAIKPDT 59 + G+ I ++CI+C C CP I PD Sbjct: 197 PVHTGKRIFTIPQTDKEKCINCSKCVKICPKSCINPDM 234 >gi|194442230|ref|YP_002040707.1| electron transport complex protein RnfB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226735430|sp|B4T595|RNFB_SALNS RecName: Full=Electron transport complex protein rnfB gi|194400893|gb|ACF61115.1| electron transport complex, RnfABCDGE type, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCIE 163 >gi|325278932|ref|YP_004251474.1| NADH dehydrogenase (quinone) [Odoribacter splanchnicus DSM 20712] gi|324310741|gb|ADY31294.1| NADH dehydrogenase (quinone) [Odoribacter splanchnicus DSM 20712] Length = 596 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C T C CPVD E + I +CI CG C+ +C +AI Sbjct: 546 QLCVGC--TLCSRNCPVDAIIGERKEAHFIDTTKCIKCGTCKDKCKFNAI 593 Score = 40.1 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGL 63 I P C+ C +C CPVDAI + + Sbjct: 543 IDPQLCVGCTLCSRNCPVDAIIGERKEAH 571 >gi|319941590|ref|ZP_08015916.1| electron transport complex protein rnfB [Sutterella wadsworthensis 3_1_45B] gi|319804960|gb|EFW01802.1| electron transport complex protein rnfB [Sutterella wadsworthensis 3_1_45B] Length = 224 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 E CI C CV CP D L + C C +C P CP+D I Sbjct: 97 AEECIGCSW--CVRACPTDAIGGSPKHLHAVLEARCTGCSLCAPACPMDCI 145 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I +ECI C C CP DAI Sbjct: 95 IRAEECIGCSWCVRACPTDAI 115 >gi|297620126|ref|YP_003708231.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus voltae A3] gi|297379103|gb|ADI37258.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus voltae A3] Length = 166 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 21/84 (25%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAI-------------------HPDECIDCG 44 V+TE C+ C C++VCPV + L I +CI C Sbjct: 65 VITEKCVHCG--TCIDVCPVKAISLTQIKLKIKNNELKIKKSHEKHKLLNYDAKKCIMCN 122 Query: 45 VCEPECPVDAIKPDTEPGLELWLK 68 +C CP DAI + ++ + Sbjct: 123 ICLKNCPFDAISIEKNQNKMIFTE 146 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C+EVCPVD I ++C+ CG C CPV AI Sbjct: 39 EKCVFCN--KCIEVCPVDAIDLNFPENTVIT-EKCVHCGTCIDVCPVKAI 85 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 CI+C C++ CP D E I ++C+ CG C CP +AI + Sbjct: 118 CIMCN--ICLKNCPFDAISIEKNQNKMIFTEKCVLCGHCGQICPANAITYE 166 Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I ++C+ C C CPVDAI Sbjct: 36 IDNEKCVFCNKCIEVCPVDAI 56 >gi|317052759|ref|YP_004113875.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfurispirillum indicum S5] gi|316947843|gb|ADU67319.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfurispirillum indicum S5] Length = 187 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDA 54 E C C + CV VCPV Y E+ + ++ CI C +C CP A Sbjct: 64 EQCHQCANPPCVPVCPVKATYAREDGVIVVNKSTCIGCTLCVISCPYGA 112 Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 33 LAIHPDECIDCGVCEPEC 50 + + PD+CIDC C+ C Sbjct: 9 IVLDPDKCIDCKACDVAC 26 >gi|260778692|ref|ZP_05887584.1| iron-sulfur cluster-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604856|gb|EEX31151.1| iron-sulfur cluster-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKPDTEPGLE--LWLK 68 CV+ CP EG + + I+P C G C CP +AI E +++ Sbjct: 189 CVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAIHYALPNPQETQKFIE 247 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 +C LC CV VCP + L +C+ CG+C CP +A Sbjct: 419 DCTLC--MSCVAVCPSRALHTDGQSPSLKFVEQDCVQCGLCTKACPENA 465 Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 11/29 (37%) Query: 42 DCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C C CP A+ + ++IN Sbjct: 185 GCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|237718617|ref|ZP_04549098.1| ferredoxin-type protein [Bacteroides sp. 2_2_4] gi|229452077|gb|EEO57868.1| ferredoxin-type protein [Bacteroides sp. 2_2_4] Length = 514 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 417 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 476 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 477 CPARPFRAIYIEGNPVQKE 495 >gi|212634095|ref|YP_002310620.1| polysulfide reductase subunit B [Shewanella piezotolerans WP3] gi|212555579|gb|ACJ28033.1| Polysulfide reductase, subunit B [Shewanella piezotolerans WP3] Length = 190 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 +C C++ CV+VCP Y ++ + I+ +C+ C C CP I P+T + Sbjct: 59 SCEQCENAPCVKVCPTGAAYVNDDGIVSINEGKCVGCLYCVAACPYKVRFINPETRVPDK 118 >gi|193212915|ref|YP_001998868.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086392|gb|ACF11668.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobaculum parvum NCIB 8327] Length = 62 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M + + + C C C CPV+ G++ I D C+DC C CPVD Sbjct: 1 MAHRINDECTYC--AACEPECPVNAISPGDSIYVIDEDVCVDCVGYHDEPACVAVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|119509289|ref|ZP_01628439.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] gi|119466131|gb|EAW47018.1| 4Fe-4S ferredoxin, iron-sulfur binding [Nodularia spumigena CCY9414] Length = 117 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 21/116 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC-------GVCEPECP-- 51 M Y +T CI C C+ VCP + + I P+ C +C C+ CP Sbjct: 1 MAYQITSQCISCDL--CLSVCPTNAVKVIDGNHWIDPELCTNCFGSVYSVPQCKAGCPTC 58 Query: 52 VDAIKPDTEPGLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQKYEKYFSPN 107 +K + + N A +T K+ + Y K FS Sbjct: 59 TGCVKQPNDYWEGWFANYNRSLAK----LTKKQ------DYWERWFNYYSKTFSEK 104 >gi|24113018|ref|NP_707528.1| electron transport complex protein RnfB [Shigella flexneri 2a str. 301] gi|30063143|ref|NP_837314.1| electron transport complex protein RnfB [Shigella flexneri 2a str. 2457T] gi|82544004|ref|YP_407951.1| electron transport complex protein RnfB [Shigella boydii Sb227] gi|81723373|sp|Q83KY6|RNFB_SHIFL RecName: Full=Electron transport complex protein rnfB gi|123769444|sp|Q320Y5|RNFB_SHIBS RecName: Full=Electron transport complex protein rnfB gi|24051982|gb|AAN43235.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041392|gb|AAP17121.1| hypothetical protein S1785 [Shigella flexneri 2a str. 2457T] gi|81245415|gb|ABB66123.1| conserved hypothetical protein [Shigella boydii Sb227] gi|281601062|gb|ADA74046.1| Electron transport complex protein rnfB [Shigella flexneri 2002017] gi|313648903|gb|EFS13340.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri 2a str. 2457T] gi|332757135|gb|EGJ87475.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri 4343-70] gi|332758097|gb|EGJ88422.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri 2747-71] gi|332758458|gb|EGJ88779.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri K-671] gi|332767029|gb|EGJ97228.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri 2930-71] gi|333003892|gb|EGK23427.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri K-218] gi|333017979|gb|EGK37284.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri K-304] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRVMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|331644286|ref|ZP_08345415.1| putative electron transport protein YsaA [Escherichia coli H736] gi|331036580|gb|EGI08806.1| putative electron transport protein YsaA [Escherichia coli H736] Length = 159 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 59 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 107 >gi|330805166|ref|XP_003290557.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium purpureum] gi|325079303|gb|EGC32909.1| NADH-ubiquinone oxidoreductase 23 kDa subunit [Dictyostelium purpureum] Length = 203 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 102 ERCIACKL--CEAICPAQAITIEAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 158 >gi|310777922|ref|YP_003966255.1| 6-hydroxynicotinate reductase [Ilyobacter polytropus DSM 2926] gi|309747245|gb|ADO81907.1| 6-hydroxynicotinate reductase [Ilyobacter polytropus DSM 2926] Length = 505 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C CK C CP+ + I D C+ CG+C CP AI+ TE Sbjct: 9 CKGCK--ICANNCPISAIDMLDKKALI-KDNCVSCGICLRVCPFAAIEKTTEEN 59 >gi|300924706|ref|ZP_07140654.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|301326565|ref|ZP_07219904.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] gi|300419133|gb|EFK02444.1| 4Fe-4S binding domain protein [Escherichia coli MS 182-1] gi|300846727|gb|EFK74487.1| 4Fe-4S binding domain protein [Escherichia coli MS 78-1] Length = 208 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK CV VCP+ + E + + CI C C CP Sbjct: 120 ADTCRQCKEPQCVNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACP 167 >gi|296536625|ref|ZP_06898700.1| cytochrome c oxidase accessory protein CcoG [Roseomonas cervicalis ATCC 49957] gi|296263045|gb|EFH09595.1| cytochrome c oxidase accessory protein CcoG [Roseomonas cervicalis ATCC 49957] Length = 495 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +C+ C CV VCP L ECI CG+C C Sbjct: 264 DCVDC--RACVHVCPTGIDIRDGQQL-----ECIGCGLCIDAC 299 >gi|296452037|ref|ZP_06893750.1| possible dihydroorotate oxidase [Clostridium difficile NAP08] gi|296879567|ref|ZP_06903548.1| possible dihydroorotate oxidase [Clostridium difficile NAP07] gi|296259110|gb|EFH05992.1| possible dihydroorotate oxidase [Clostridium difficile NAP08] gi|296429449|gb|EFH15315.1| possible dihydroorotate oxidase [Clostridium difficile NAP07] Length = 369 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 VV +N CI CK CV C + E + L I D+C CG+C CP A Sbjct: 308 VVDDNKCIKCKQ--CVTSCVYEAL-EVTDKLNIDADKCFGCGLCVTRCPKGA 356 >gi|258625037|ref|ZP_05719958.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM603] gi|258582670|gb|EEW07498.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM603] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|225418712|ref|ZP_03761901.1| hypothetical protein CLOSTASPAR_05936 [Clostridium asparagiforme DSM 15981] gi|225041767|gb|EEG52013.1| hypothetical protein CLOSTASPAR_05936 [Clostridium asparagiforme DSM 15981] Length = 175 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKP 57 C+ C C+ CPV C + F CI C C CP A + Sbjct: 60 ACMHCDDAPCISACPVGCLRKDPETGFTVYDNANCIGCKSCALACPFGAPRF 111 >gi|161503449|ref|YP_001570562.1| electron transport complex protein RnfB [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189043387|sp|A9MRW7|RNFB_SALAR RecName: Full=Electron transport complex protein rnfB gi|160864796|gb|ABX21419.1| hypothetical protein SARI_01523 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I+ Sbjct: 108 MLAVIDENHCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCIE 163 >gi|149194151|ref|ZP_01871249.1| MOLYBDOPTERIN OXIDOREDUCTASE, IRON-SULFUR BINDING SUBUNIT [Caminibacter mediatlanticus TB-2] gi|149136104|gb|EDM24582.1| MOLYBDOPTERIN OXIDOREDUCTASE, IRON-SULFUR BINDING SUBUNIT [Caminibacter mediatlanticus TB-2] Length = 223 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT 59 C C CV VCP + E + + D CI C C CP DA D Sbjct: 61 CNHCIDAPCVTVCPTGASHFAEGGIVKVDYDMCIICKGCMEACPYDARFVDE 112 >gi|149185800|ref|ZP_01864115.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Erythrobacter sp. SD-21] gi|148830361|gb|EDL48797.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Erythrobacter sp. SD-21] Length = 436 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 7 ENCILCKHTDCVEVCPVD---CFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + C+ C CV CP +G+ L P C+ G C+ CP DAI Sbjct: 57 DLCLGCG--ACVIACPEKKILALIDGKAALV-EPTSCVGHGACQAACPFDAI 105 Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I+PD C+ CG C CP I Sbjct: 54 INPDLCLGCGACVIACPEKKI 74 >gi|5734543|emb|CAB52772.1| polyferredoxin [Methanothermobacter thermautotrophicus] Length = 441 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDT 59 E C C C+ CPVD + + + I D C C +C CP DAI+ T Sbjct: 16 EKCRNCPDKPCLNACPVDAVHIDPDTGEVEID-DRCFGCVLCREACPYDAIRMKT 69 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 9 CILCKHTDCVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CV C + + I D+C+ CG C CP +AIK Sbjct: 87 CRGCG--ACVSACRTGAIHLTSSGKTGVHSEIDEDKCVRCGYCARACPTEAIKY 138 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 +V+ + C CV CPVD + + D CI CG C+ CPV A+K + E Sbjct: 385 HVICQRC-----GVCVNHCPVDAMAMDGE-VEVDDDTCILCGECQDICPVTAVKLNLEDD 438 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 V+ E CI C CV CPV D C+ CG C CPVDA++ Sbjct: 303 VLEERCIGCGL--CVTECPVGVIEPVTPAPVEIKDGCVFCGRCRGVCPVDAVE 353 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 10/76 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYE--------GENFLAIHPDECIDCGVCEPECPVDAIK 56 + + C C C E CP D EN I+P C CG C C AI Sbjct: 46 IDDRCFGC--VLCREACPYDAIRMKTILGEPVRENVPVINPRICRGCGACVSACRTGAIH 103 Query: 57 PDTEPGLELWLKINSE 72 + + +I+ + Sbjct: 104 LTSSGKTGVHSEIDED 119 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 2 TYVVTE-NCILCKHTDCVEVCP-VDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKP 57 VV + +CI C C VCP G I P C C C CP AIK Sbjct: 151 AVVVNQRDCIGC--MTCTRVCPSRGAIKVGKINRLPYIDPSYCARCEECMDVCPSAAIKY 208 Query: 58 DTEP-GLELWLKIN 70 + E + K+N Sbjct: 209 SSRKRAYENFSKLN 222 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECIDCGVCEPECPV-DAIK 56 + C+ C + C CP + GE + ++ +CI C C CP AIK Sbjct: 119 DKCVRCGY--CARACPTEAIKYGEILPRSVVGRKAVVVNQRDCIGCMTCTRVCPSRGAIK 176 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI CG+C ECPV I+P T +E Sbjct: 306 ERCIGCGLCVTECPVGVIEPVTPAPVE 332 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 26/80 (32%), Gaps = 24/80 (30%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL----------------------AIHPDECID 42 + + C+ C C VCPVD E + C Sbjct: 333 IKDGCVFCG--RCRGVCPVDAVEITEEGFRASDGRIYLERRILRGPRSGSVEVDHVICQR 390 Query: 43 CGVCEPECPVDAIKPDTEPG 62 CGVC CPVDA+ D E Sbjct: 391 CGVCVNHCPVDAMAMDGEVE 410 >gi|293376666|ref|ZP_06622893.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] gi|325845086|ref|ZP_08168399.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] gi|292644724|gb|EFF62807.1| 4Fe-4S binding domain protein [Turicibacter sanguinis PC909] gi|325488900|gb|EGC91296.1| 4Fe-4S binding domain protein [Turicibacter sp. HGF1] Length = 264 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 + T++CI CK C +VCP+ C + + + EC C C CP AI+ Sbjct: 185 FFATDDCISCK--ICEKVCPIRCITVSKKPIWKN-SECTQCLACVNYCPKSAIQY 236 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 D+CI C +CE CP+ I +P + Sbjct: 189 DDCISCKICEKVCPIRCITVSKKPIWK 215 >gi|291617338|ref|YP_003520080.1| RnfB [Pantoea ananatis LMG 20103] gi|291152368|gb|ADD76952.1| RnfB [Pantoea ananatis LMG 20103] gi|327393783|dbj|BAK11205.1| electron transport complex protein RnfB [Pantoea ananatis AJ13355] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 116 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVAPCPTDCIE 163 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Query: 18 VEVCPVDCFYEGE----NFLAIHPDECIDCGVCEPECPVDAI 55 VE P+D E + I CI C C CPVDAI Sbjct: 91 VEPQPIDGDEEAKAPVRTVAWIDEANCIGCTKCIQACPVDAI 132 >gi|262165720|ref|ZP_06033457.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM223] gi|262025436|gb|EEY44104.1| iron-sulfur cluster-binding protein [Vibrio mimicus VM223] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|260913116|ref|ZP_05919598.1| formate-dependent nitrite reductase [Fe-S] protein NrfC [Pasteurella dagmatis ATCC 43325] gi|260632703|gb|EEX50872.1| formate-dependent nitrite reductase [Fe-S] protein NrfC [Pasteurella dagmatis ATCC 43325] Length = 226 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C + CV VCP F + E + +H D C+ C C CP Sbjct: 94 SCQHCSNAPCVHVCPTGASFVDKETGIVDVHKDLCVGCQYCIAVCPY 140 >gi|261402607|ref|YP_003246831.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] gi|261369600|gb|ACX72349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus vulcanius M7] Length = 161 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C EVCP + Y + + I+ ++C+ CG C+ CP +AI Sbjct: 36 DKCIGCG--KCREVCPTNAITYNNKLHIVINREKCVFCGKCKEVCPTNAI 83 Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +E C C C++ CP E + + I ++C CG CE CP++AI Sbjct: 111 SERCASCLV--CLKNCPFHAIEEYGDKIRIDINKCELCGKCEEICPLNAI 158 >gi|238023170|ref|ZP_04603596.1| hypothetical protein GCWU000324_03096 [Kingella oralis ATCC 51147] gi|237865553|gb|EEP66693.1| hypothetical protein GCWU000324_03096 [Kingella oralis ATCC 51147] Length = 159 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTTRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|229580426|ref|YP_002838826.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011142|gb|ACP46904.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.G.57.14] gi|323475866|gb|ADX86472.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus REY15A] Length = 294 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 109 YNIPINCFHCVNAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 161 >gi|237731328|ref|ZP_04561809.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906867|gb|EEH92785.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 208 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK C++VCP+ + + +A+ CI C C CP Sbjct: 120 ADTCRQCKDPQCMKVCPIGAITWKQEDGCIAVDHKRCIGCSACTTACP 167 >gi|170768728|ref|ZP_02903181.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia albertii TW07627] gi|170122276|gb|EDS91207.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia albertii TW07627] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + + C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRSMHTVMSELCTGCNLCVDPCPTQCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|148379320|ref|YP_001253861.1| iron-sulfur cluster-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153931703|ref|YP_001383696.1| iron-sulfur cluster-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153935168|ref|YP_001387244.1| iron-sulfur cluster-binding protein [Clostridium botulinum A str. Hall] gi|153939701|ref|YP_001390706.1| iron-sulfur cluster-binding protein [Clostridium botulinum F str. Langeland] gi|226948623|ref|YP_002803714.1| iron-sulfur cluster-binding protein [Clostridium botulinum A2 str. Kyoto] gi|148288804|emb|CAL82888.1| putative iron-sulfur cluster binding protein [Clostridium botulinum A str. ATCC 3502] gi|152927747|gb|ABS33247.1| iron-sulfur cluster-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152931082|gb|ABS36581.1| iron-sulfur cluster-binding protein [Clostridium botulinum A str. Hall] gi|152935597|gb|ABS41095.1| iron-sulfur cluster-binding protein [Clostridium botulinum F str. Langeland] gi|226843047|gb|ACO85713.1| iron-sulfur cluster-binding protein [Clostridium botulinum A2 str. Kyoto] gi|295318780|gb|ADF99157.1| iron-sulfur cluster-binding protein [Clostridium botulinum F str. 230613] gi|322805661|emb|CBZ03226.1| ferredoxin [Clostridium botulinum H04402 065] Length = 425 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D C+ CG C CP++AIK Sbjct: 289 INKDRCVGCGKCTKVCPMEAIK 310 >gi|110641751|ref|YP_669481.1| electron transport complex protein RnfB [Escherichia coli 536] gi|123148053|sp|Q0THJ9|RNFB_ECOL5 RecName: Full=Electron transport complex protein rnfB gi|110343343|gb|ABG69580.1| electron transport complex protein RnfB [Escherichia coli 536] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|82777102|ref|YP_403451.1| electron transport complex protein RnfB [Shigella dysenteriae Sd197] gi|309788405|ref|ZP_07683009.1| electron transport complex, RnfABCDGE type, B subunit [Shigella dysenteriae 1617] gi|123769594|sp|Q32FE5|RNFB_SHIDS RecName: Full=Electron transport complex protein rnfB gi|81241250|gb|ABB61960.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308923787|gb|EFP69290.1| electron transport complex, RnfABCDGE type, B subunit [Shigella dysenteriae 1617] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|117919163|ref|YP_868355.1| response regulator receiver protein [Shewanella sp. ANA-3] gi|117611495|gb|ABK46949.1| response regulator receiver protein [Shewanella sp. ANA-3] Length = 410 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C C C + CP + + I D+C+ CG C CP AI+ Sbjct: 22 CKGCD--ACKQFCPTHAIHGASGAVHSIDEDKCLSCGQCLINCPFSAIEE 69 Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ +C C C+ CP AI Sbjct: 17 INASKCKGCDACKQFCPTHAIH 38 >gi|325290604|ref|YP_004266785.1| cobyrinic acid ac-diamide synthase [Syntrophobotulus glycolicus DSM 8271] gi|324966005|gb|ADY56784.1| cobyrinic acid ac-diamide synthase [Syntrophobotulus glycolicus DSM 8271] Length = 295 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI--KPDTEPGLELW 66 CI C C+E C + + + + EC CGVCE CPV AI +PD L L+ Sbjct: 69 CISCGL--CLEYCRFNAIKKNNSQYEVSCYECEGCGVCEAFCPVQAISLQPDKAGELRLY 126 Query: 67 L 67 + Sbjct: 127 M 127 >gi|320174121|gb|EFW49286.1| NrfC-like protein [Shigella dysenteriae CDC 74-1112] Length = 184 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTEASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|283780218|ref|YP_003370973.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pirellula staleyi DSM 6068] gi|283438671|gb|ADB17113.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pirellula staleyi DSM 6068] Length = 175 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 13/69 (18%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-----------FLAIHPDECIDCGVCEPECPVDAIKP 57 CI C C + CPVDC Y G+ AI +C+ C +C CPVD I Sbjct: 65 CIACDQ--CAKACPVDCIYIGKERVEGSKGFKITGFAIDYSKCMFCALCVEPCPVDCIFM 122 Query: 58 DTEPGLELW 66 L + Sbjct: 123 GATHDLSCY 131 >gi|224370160|ref|YP_002604324.1| putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD) [Desulfobacterium autotrophicum HRM2] gi|223692877|gb|ACN16160.1| putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD) [Desulfobacterium autotrophicum HRM2] Length = 511 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C++C C CP + AI P C CG+C ECP+DAI+ Sbjct: 322 CVICL--TCYRCCPHGAIFWENGVAAISPVACQGCGICASECPMDAIQ 367 >gi|218961804|ref|YP_001741579.1| electron transport complex protein rnfB, polyferredoxin subunit (rnfB module) [Candidatus Cloacamonas acidaminovorans] gi|167730461|emb|CAO81373.1| electron transport complex protein rnfB, polyferredoxin subunit (rnfB module) [Candidatus Cloacamonas acidaminovorans] Length = 287 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C + C + CP + N I +C DCG C CP AI Sbjct: 231 PCIGC--SLCAKKCPAEAITVENNIARIDYGKCTDCGTCATVCPTKAI 276 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%) Query: 12 CKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECP 51 DC+ C D + E I ++C CG C CP Sbjct: 156 VGFNDCIAACKFDAISIDNEGMRVIDREKCTGCGACVTACP 196 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 20/70 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI---------HP---------DECIDCGVCEP 48 E C C CV CP + + +P CI C +C Sbjct: 183 EKCTGCG--ACVTACPRKLIMLVPESMNVFISCSSKDKNPLPKQNCGADKPCIGCSLCAK 240 Query: 49 ECPVDAIKPD 58 +CP +AI + Sbjct: 241 KCPAEAITVE 250 >gi|167755797|ref|ZP_02427924.1| hypothetical protein CLORAM_01312 [Clostridium ramosum DSM 1402] gi|237734764|ref|ZP_04565245.1| predicted protein [Mollicutes bacterium D7] gi|167704736|gb|EDS19315.1| hypothetical protein CLORAM_01312 [Clostridium ramosum DSM 1402] gi|229382092|gb|EEO32183.1| predicted protein [Coprobacillus sp. D7] Length = 387 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 1 MTYVVTENCILCKHT-DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 M V++ CK+ CV+ CP+D + I D+CI+C +C C Sbjct: 1 MKQVISYLGSGCKNCIKCVKSCPMDAISIVNEQVIIDEDKCINCDICIQAC 51 >gi|159905591|ref|YP_001549253.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887084|gb|ABX02021.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 252 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C E+CPV + + + +CI CG CE CPV AI Sbjct: 199 DTCINC--MVCSEICPVGAIVYEDGLMKLDDKKCIFCGKCEKNCPVTAI 245 Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAI 55 YV T C+ C+ C EVCPV E ++ I P++C+ C +C CPV AI Sbjct: 42 YVETNKCVRCEL--CYEVCPVQAIKEPSVKSPAEIIPEKCVKCEICAKTCPVGAI 94 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C C CP E N + I+ D C+ C CE CP AIK + E G Sbjct: 132 ESCIKCG--ICERFCPTSAIKVEKRNSIEINLDLCMGCTACEKVCPKSAIKVENELGE 187 Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 10/61 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C+ C T C +VCP EN ++++ D CI+C VC CPV AI + Sbjct: 162 DLCMGC--TACEKVCPKSAIKVENELGEIPAENVISLNNDTCINCMVCSEICPVGAIVYE 219 Query: 59 T 59 Sbjct: 220 D 220 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 32/96 (33%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFL------------------------AIHP 37 ++ E C+ C+ C + CPV EG L + Sbjct: 74 IIPEKCVKCE--ICAKTCPVGAINVLEGRAELKDDDVIYELKEIDVTHRKVRLVKHELDE 131 Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEY 73 + CI CG+CE CP AIK + ++IN + Sbjct: 132 ESCIKCGICERFCPTSAIKVEKRNS----IEINLDL 163 >gi|119872881|ref|YP_930888.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674289|gb|ABL88545.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pyrobaculum islandicum DSM 4184] Length = 368 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 2 TYVVTEN-CILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDT 59 T VV + CI C CV CP F E + + D CIDCG+C CPV+A+K + Sbjct: 76 TVVVDQAKCIWCG--MCVRSCPATAFEYVERKSIRVRYDRCIDCGLCNAVCPVEAVKMPS 133 Query: 60 EPG 62 P Sbjct: 134 LPD 136 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 V C LC CV VCP D L + P CI CGVC +CP IK + Sbjct: 252 VAGGCTLCG--ACVNVCPTDALSIKGFELRLTPALCIACGVCVEKCPEKVIKIGKTREDK 309 Query: 65 LW 66 + Sbjct: 310 PY 311 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 11/67 (16%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK-------INSEYATQWPNITTK 83 + + + +CI CG+C CP A + + + N+ P K Sbjct: 75 DTVVVDQAKCIWCGMCVRSCPATAFEYVERKSIRVRYDRCIDCGLCNA----VCPVEAVK 130 Query: 84 KESLPSA 90 SLP Sbjct: 131 MPSLPDG 137 >gi|83590741|ref|YP_430750.1| 4Fe-4S ferredoxin, iron-sulfur binding [Moorella thermoacetica ATCC 39073] gi|83573655|gb|ABC20207.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Moorella thermoacetica ATCC 39073] Length = 228 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + +C +C++ C +VCPV Y + + + CI C C CP + + E Sbjct: 58 YFLPVSCQMCENAPCEKVCPVGATYTDDRGRVLVDYERCIGCRYCMAACPYGVRQFNWED 117 Query: 62 GLE 64 + Sbjct: 118 QQK 120 >gi|83590717|ref|YP_430726.1| ferredoxin hydrogenase [Moorella thermoacetica ATCC 39073] gi|83573631|gb|ABC20183.1| Ferredoxin hydrogenase [Moorella thermoacetica ATCC 39073] Length = 460 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 7/74 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD 58 M Y+ + C C C E+CP EG I+ + C++CG C C A Sbjct: 1 MIYIDRDLCTGC--RRCAEICPTGAI-EGNQGEPQIINREICVNCGQCVQICSAYASPYT 57 Query: 59 TEPGLELWLKINSE 72 T P E N E Sbjct: 58 TSP--ETMAAKNRE 69 >gi|157156899|ref|YP_001462967.1| hypothetical protein EcE24377A_1889 [Escherichia coli E24377A] gi|157078929|gb|ABV18637.1| iron-sulfur cluster-binding protein [Escherichia coli E24377A] Length = 208 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK CV VCP+ + E + + CI C C CP Sbjct: 120 ADTCRQCKEPQCVNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACP 167 >gi|119774966|ref|YP_927706.1| electron transport complex protein RnfB [Shewanella amazonensis SB2B] gi|166225085|sp|A1S6N0|RNFB_SHEAM RecName: Full=Electron transport complex protein rnfB gi|119767466|gb|ABM00037.1| iron-sulfur cluster-binding protein [Shewanella amazonensis SB2B] Length = 189 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD I D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAIVGAGKLMHTVITQD-CTGCDLCVEPCPVDCI 159 Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T++C C CVE CPVDC Sbjct: 136 MHTVITQDCTGCDL--CVEPCPVDCI 159 >gi|332993968|gb|AEF04023.1| electron transport complex protein RnfB [Alteromonas sp. SN2] Length = 189 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD + + +EC C +C CPVD I Sbjct: 107 AFIREDECIGC--TKCIQACPVDAILGAAKHMHTVIVEECTGCDLCVDPCPVDCI 159 Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 18 VEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECPVDAI 55 VE P+D + E+ I DECI C C CPVDAI Sbjct: 89 VEPKPLDAAHGEEDTKKVAFIREDECIGCTKCIQACPVDAI 129 >gi|331654382|ref|ZP_08355382.1| putative electron transport protein YgfS [Escherichia coli M718] gi|331047764|gb|EGI19841.1| putative electron transport protein YgfS [Escherichia coli M718] Length = 163 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|331268324|ref|YP_004394816.1| hydrogenase [Clostridium botulinum BKT015925] gi|329124874|gb|AEB74819.1| hydrogenase [Clostridium botulinum BKT015925] Length = 448 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%) Query: 8 NC-ILCKHTD----CVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 +C + C T C + CP D + N I D+C DCG C CP +I E Sbjct: 80 DCSMDCSDTGELTLCQKSCPFDAILVDKNTNSTYISLDKCTDCGFCVNACPTGSILDKIE 139 >gi|282855938|ref|ZP_06265229.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] gi|282586157|gb|EFB91434.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Pyramidobacter piscolens W5455] Length = 596 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEV-CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C++ CP F + E ++I +C+ C VC CPV AI Sbjct: 543 EKCIGCK--KCLQTGCPALSFDKYERKVSIDRMQCVGCTVCAQVCPVKAI 590 >gi|260772822|ref|ZP_05881738.1| iron-sulfur cluster-binding protein [Vibrio metschnikovii CIP 69.14] gi|260611961|gb|EEX37164.1| iron-sulfur cluster-binding protein [Vibrio metschnikovii CIP 69.14] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-----EGENFLAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP + + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSAQTGHRIEINPYLCQGIGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFVE 247 Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECP 51 +++C LC CV VCP + + A+H +C+ CG+C CP Sbjct: 417 SQDCTLC--MSCVAVCPTRALHHSGDIPALHFTEQDCVQCGLCVTACP 462 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + ++ D C C C CP A+ + ++IN Sbjct: 166 PKYFRLNTDLCAHSSRGVKGCERCVDACPAGALSSEGSAQTGHRIEIN 213 >gi|187780016|ref|ZP_02996489.1| hypothetical protein CLOSPO_03612 [Clostridium sporogenes ATCC 15579] gi|187773641|gb|EDU37443.1| hypothetical protein CLOSPO_03612 [Clostridium sporogenes ATCC 15579] Length = 425 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D C+ CG C CP++AIK Sbjct: 289 INKDRCVGCGKCTKVCPMEAIK 310 >gi|168184134|ref|ZP_02618798.1| iron-sulfur cluster-binding protein [Clostridium botulinum Bf] gi|237794698|ref|YP_002862250.1| iron-sulfur cluster-binding protein [Clostridium botulinum Ba4 str. 657] gi|182672734|gb|EDT84695.1| iron-sulfur cluster-binding protein [Clostridium botulinum Bf] gi|229261438|gb|ACQ52471.1| iron-sulfur cluster-binding protein [Clostridium botulinum Ba4 str. 657] Length = 425 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D C+ CG C CP++AIK Sbjct: 289 INKDRCVGCGKCTKVCPMEAIK 310 >gi|145299425|ref|YP_001142266.1| electron transport complex protein RnfB [Aeromonas salmonicida subsp. salmonicida A449] gi|166225079|sp|A4SNP6|RNFB_AERS4 RecName: Full=Electron transport complex protein rnfB gi|142852197|gb|ABO90518.1| electron transport complex protein RnfB [Aeromonas salmonicida subsp. salmonicida A449] Length = 187 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 ++ + CI C T C++ CPVD + + DEC C +C CP D I+ Sbjct: 108 AFIHEDQCIGC--TKCIQACPVDAIVGATKAMHTVITDECTGCDLCVDPCPTDCIE 161 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYE 28 M V+T+ C C CV+ CP DC Sbjct: 137 MHTVITDECTGCDL--CVDPCPTDCIEM 162 >gi|88603575|ref|YP_503753.1| coenzyme F420 hydrogenase [Methanospirillum hungatei JF-1] gi|88189037|gb|ABD42034.1| coenzyme F420-reducing hydrogenase, gamma subunit [Methanospirillum hungatei JF-1] Length = 262 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 1 MTYVVTE-NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 MT V+ + C+ C C CPV E I D CI CG C CP Sbjct: 185 MTKVINQGLCMGCG--TCATSCPVFAITMEEGKPNIQRDMCIKCGACYAACP 234 Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 34 AIHPDECIDCGVCEPECPVDAIKPDT 59 I+ C+ CG C CPV AI + Sbjct: 188 VINQGLCMGCGTCATSCPVFAITMEE 213 >gi|113968836|ref|YP_732629.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-4] gi|113883520|gb|ABI37572.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-4] Length = 235 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + + + +C C C CP +A I DT+ Sbjct: 105 SCQQCKNAPCVTVCPTGAAHRDAKTGIVTMDASKCAGCKYCIGACPYNARYINSDTDVAD 164 Query: 64 ELWLKINSEYAT 75 +NS+ A Sbjct: 165 NCDFCLNSKLAK 176 >gi|325957922|ref|YP_004289388.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329354|gb|ADZ08416.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 658 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 2/72 (2%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 V + C C+ C+++CP + I+ C CG C CP A+ Sbjct: 585 ALVDEDVCGGCEV--CIDLCPYGAVERIDEKAHINVALCKGCGTCVGACPSGALDQQHFK 642 Query: 62 GLELWLKINSEY 73 +++ +I + Sbjct: 643 TSQIFAQIEAAM 654 Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 20/78 (25%) Query: 3 YVVTENCILCKHTDCVEVCPVDC---FYEGENFL---------------AIHPDECIDCG 44 Y+ C C C EVCP++ F EG + I D CI+C Sbjct: 249 YIDESVCTGCG--SCTEVCPIEIPNYFDEGVGMVKATYIPFPQAVPLCATIDKDYCIECK 306 Query: 45 VCEPECPVDAIKPDTEPG 62 +C+ C AIK D EP Sbjct: 307 LCDQVCGNGAIKHDQEPE 324 >gi|323169237|gb|EFZ54913.1| hypothetical protein SS53G_0407 [Shigella sonnei 53G] Length = 184 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|317485988|ref|ZP_07944843.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316922761|gb|EFV43992.1| 4Fe-4S binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 175 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C C++ C +CP + + + ++ C C +C CP AI ++ Sbjct: 69 SCRQCENAPCARICPTGALQQDDGIVTMNAQICSGCQLCIMACPYGAISLES 120 >gi|299146147|ref|ZP_07039215.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. 3_1_23] gi|298516638|gb|EFI40519.1| electron transport complex, RnfABCDGE type, B subunit [Bacteroides sp. 3_1_23] Length = 288 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 T +CI C CV+ CP + N I P +C C C CP + I P + Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPHKCKSCRKCVEVCPQNTIIELNFPPRKP 275 Query: 66 WLKINSE 72 ++ +E Sbjct: 276 KVEEVAE 282 Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|294670450|ref|ZP_06735332.1| hypothetical protein NEIELOOT_02169 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307914|gb|EFE49157.1| hypothetical protein NEIELOOT_02169 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 159 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTIRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|288559910|ref|YP_003423396.1| ferredoxin [Methanobrevibacter ruminantium M1] gi|288542620|gb|ADC46504.1| ferredoxin [Methanobrevibacter ruminantium M1] Length = 291 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + +++NC +CK ++C + + I ++C+ CG C C +AI+ Sbjct: 214 HPISDNCKMCKKCLGDDICFGGAISLENDKITIDQNKCVGCGHCVQTCKFNAIE 267 >gi|268324149|emb|CBH37737.1| hypothetical protein, containing 4Fe-4S binding domains [uncultured archaeon] Length = 103 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +V E C+ C C VC + + + CI C C CP AI+ Sbjct: 12 AFVNEELCVGCG--KCTGVCWTGAIGIVDKKAVVDFNRCICCTACVRACPKGAIQ 64 >gi|255010643|ref|ZP_05282769.1| putative ferredoxin [Bacteroides fragilis 3_1_12] Length = 278 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C ++CPV +G+ L + CI C C CP A DT Sbjct: 211 CTHCG--ACAKMCPVSAIIKGDE-LNTDAERCIKCCACVKGCPQKARVYDTP 259 Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 10/25 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 C CG C CPV AI E Sbjct: 207 DESLCTHCGACAKMCPVSAIIKGDE 231 >gi|256810302|ref|YP_003127671.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] gi|256793502|gb|ACV24171.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanocaldococcus fervens AG86] Length = 163 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 + CI C C+EVCPV+ ++ L I+ ++C+ CG C+ CP DA+ Sbjct: 37 DKCINCG--RCIEVCPVNAINYDKSGLFINIEKEKCVFCGKCKMVCPTDAV 85 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +E C C C+ CP + E + I ++C CG CE CP++AI Sbjct: 113 SEKCASCLV--CLRNCPFNAIEEYGEKIRIDINKCELCGRCEEICPLNAI 160 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 15/21 (71%) Query: 38 DECIDCGVCEPECPVDAIKPD 58 D+CI+CG C CPV+AI D Sbjct: 37 DKCINCGRCIEVCPVNAINYD 57 >gi|256826547|ref|YP_003150506.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582690|gb|ACU93824.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 177 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C C VCP + + E +AI + CI C C CP A+ Sbjct: 56 ACRHCVDAPCAAVCPTEALYREEGGRVAIREENCIGCRNCVMACPYGAV 104 >gi|222034581|emb|CAP77323.1| electron transport protein ygfS [Escherichia coli LF82] gi|312947418|gb|ADR28245.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 162 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|168180011|ref|ZP_02614675.1| iron-sulfur cluster-binding protein [Clostridium botulinum NCTC 2916] gi|182668962|gb|EDT80938.1| iron-sulfur cluster-binding protein [Clostridium botulinum NCTC 2916] Length = 425 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I+ D C+ CG C CP++AIK Sbjct: 289 INKDRCVGCGKCTKVCPMEAIK 310 >gi|159905592|ref|YP_001549254.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|159887085|gb|ABX02022.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6] Length = 161 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C++C C + CP E ++ ++ D+C+ CG CE CP AIK + Sbjct: 112 QKCVMCLV--CSKNCPFGAISESDDKISFDMDKCVLCGHCEKICPAKAIKLE 161 Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI+C C+EVCPV I D+C+ C C CPVDAIK Sbjct: 36 ELCIMCD--RCLEVCPVTAISSNFPEVPHID-DKCVYCNTCVETCPVDAIK 83 Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELWLKIN 70 N + I P+ CI C C CPV AI P+ + + N Sbjct: 28 NNKIEIDPELCIMCDRCLEVCPVTAISSNFPEVPHIDDKCVYCN 71 Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 20/74 (27%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE------------------NFLAIHPDECIDCGVC 46 + + C+ C CVE CPVD + L + +C+ C VC Sbjct: 63 IDDKCVYCN--TCVETCPVDAIKITKTRVKVERGNLIIENRLKSENLEYNRQKCVMCLVC 120 Query: 47 EPECPVDAIKPDTE 60 CP AI + Sbjct: 121 SKNCPFGAISESDD 134 >gi|172035472|ref|YP_001801973.1| 4Fe-4S ferredoxin [Cyanothece sp. ATCC 51142] gi|57864810|gb|AAW56985.1| ferredoxin [Cyanothece sp. ATCC 51142] gi|171696926|gb|ACB49907.1| 4Fe-4S ferredoxin [Cyanothece sp. ATCC 51142] Length = 120 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 8/59 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVD 53 M+Y +T CI C + C CP +N I C DC C CP + Sbjct: 1 MSYTITNECINC--SRCRSACPTGAITIQDNVFLIDATLCNDCQGYYGTPQCASVCPTN 57 Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 +ECI+C C CP AI Sbjct: 1 MSYTITNECINCSRCRSACPTGAI 24 >gi|78043263|ref|YP_360108.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995378|gb|ABB14277.1| iron-sulfur cluster-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 205 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CI C C +VCPV I+ + C C CE CP AI Sbjct: 13 DKCIGC--QTCAKVCPVLAIKIENKKPVINAEMCRGCAACEQRCPQYAI 59 Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSEYATQWPNITTKKE 85 I D+CI C C CPV AIK + + + IN+E + Sbjct: 10 IDYDKCIGCQTCAKVCPVLAIKIENKKPV-----INAEMCRGCAACEQRCP 55 >gi|15899512|ref|NP_344117.1| oxydoreductase, putative [Sulfolobus solfataricus P2] gi|13816140|gb|AAK42907.1| Oxydoreductase, putative [Sulfolobus solfataricus P2] Length = 293 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 108 YNIPINCFHCINAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 160 >gi|45359027|ref|NP_988584.1| hypothetical protein MMP1464 [Methanococcus maripaludis S2] gi|45047902|emb|CAF31020.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 161 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C++C C + CP + E ++ ++ + D+C+ CG CE CP AIK + Sbjct: 114 CVMCLV--CTKNCPFEAISESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161 Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIK 56 E CILC C+EVCPV I ++C+ C C CPVDAIK Sbjct: 36 EICILCN--RCLEVCPVTAISSNFPEVPDID-NKCVYCNTCVETCPVDAIK 83 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI---KPDTEPGLELWLKIN 70 N + I+P+ CI C C CPV AI P+ + N Sbjct: 29 NKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCN 71 Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 20/74 (27%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGE------------------NFLAIHPDECIDCGVC 46 + C+ C CVE CPVD + L + +C+ C VC Sbjct: 63 IDNKCVYCN--TCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVC 120 Query: 47 EPECPVDAIKPDTE 60 CP +AI + Sbjct: 121 TKNCPFEAISESDD 134 >gi|327191030|gb|EGE58084.1| putative NADH-ubiquinone oxidoreductase protein [Rhizobium etli CNPAF512] Length = 188 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 68 CVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|325958028|ref|YP_004289494.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] gi|325329460|gb|ADZ08522.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanobacterium sp. AL-21] Length = 453 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTE 60 T+V + C+ CK C ++CP D E + + +CI CG C CP AI + E Sbjct: 391 TFVQDKMCMKCKL--CTKICPEDAINENSEGNIVVDDSKCIYCGACSNACPAKAIILERE 448 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+E+CI C C E+CP + + D+CI C C CPV AI Sbjct: 327 TVSEDCITCG--ICSELCPKGAITLRRGSIDVDMDKCILCEKCAIHCPVSAI 376 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CVE CP + + CI CG C+ CP AI Sbjct: 14 CVEECPTEAIRIIDGKAF----SCITCGACKDACPNSAIF 49 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 C C C +VCPV +G I +C C C ECP A+ + Sbjct: 176 CTEC--RICEDVCPVGAIKDG----VIDDTKCTLCLKCVSECPNSAMYTED 220 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +CI C C + CP ++ + + +C CGVCE CPV+ IK + Sbjct: 32 SCITCG--ACKDACPNSAIFKNKFGGFVVDRAKCNACGVCEMTCPVNNIKIED 82 Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C DC+EVCPV E + C+ CG C C V+ Sbjct: 270 CKECSTMDCLEVCPVGTIRESADPDRAVEGFCVSCGKCVQVCDVN 314 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 ENC LC C CP + + C +C +CE CPV AIK Sbjct: 149 ENCTLCG--RCEYYCPTNAIIVDVDS----EGLCTECRICEDVCPVGAIKD 193 >gi|322628726|gb|EFY25512.1| dimethylsulfoxide reductase, B subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] Length = 137 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 11 LCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C+ C +VCP ++ ++ F+ ++ + CI C C CP A + ++ G Sbjct: 1 HCEDPACTKVCPSGAMHKRDDGFVVVNEEVCIGCRYCHMACPYGAPQYNSAKGH 54 >gi|320540447|ref|ZP_08040097.1| putative NADH:ubiquinone oxidoreductase, chain I [Serratia symbiotica str. Tucson] gi|320029378|gb|EFW11407.1| putative NADH:ubiquinone oxidoreductase, chain I [Serratia symbiotica str. Tucson] Length = 176 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Query: 6 TENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPV C +G F I+ CI CG+CE CP AI Sbjct: 57 AERCVACNL--CAVACPVSCISLQKAEQQDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114 Query: 56 KPDTEPGLELW 66 + + + + Sbjct: 115 QLTPDFEMGEF 125 >gi|312134825|ref|YP_004002163.1| indolepyruvate ferredoxin oxidoreductase subunit alpha [Caldicellulosiruptor owensensis OL] gi|311774876|gb|ADQ04363.1| indolepyruvate ferredoxin oxidoreductase, alpha subunit [Caldicellulosiruptor owensensis OL] Length = 593 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + +NC CK + CP E EN + I C CG+C+ CP AI+ + Sbjct: 537 INQNCSNCKGCMQITGCP--ALKEDENGNIFIDSALCNGCGLCKSFCPYSAIEKVMKDD 593 >gi|294495224|ref|YP_003541717.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] gi|292666223|gb|ADE36072.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanohalophilus mahii DSM 5219] Length = 205 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Query: 1 MTYVVTENCILCKHTDCVEVCPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M + E CI CK C +VCP++ + N +PD CI CG C CP DA+ Sbjct: 158 MAH---ELCIDCK--KCEKVCPMELTVRDIGN----NPD-CIKCGRCVEACPKDALYF 205 >gi|283833325|ref|ZP_06353066.1| putative oxidoreductase, Fe-S subunit [Citrobacter youngae ATCC 29220] gi|291070963|gb|EFE09072.1| putative oxidoreductase, Fe-S subunit [Citrobacter youngae ATCC 29220] Length = 208 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK C++VCP+ + + +A+ CI C C CP Sbjct: 120 ADTCRQCKDPQCMKVCPIGAITWKQEDGCIAVDHKRCIGCSACTTACP 167 >gi|227827015|ref|YP_002828794.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.14.25] gi|227458810|gb|ACP37496.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.14.25] Length = 612 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C CP + I CI CG C P CP AI Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAI 596 >gi|114049025|ref|YP_739575.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. MR-7] gi|117918948|ref|YP_868140.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sp. ANA-3] gi|113890467|gb|ABI44518.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. MR-7] gi|117611280|gb|ABK46734.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sp. ANA-3] Length = 235 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + + + +C C C CP +A I DT+ Sbjct: 105 SCQQCKNAPCVTVCPTGAAHRDAKTGIVTMDASKCAGCKYCIGACPYNARYINSDTDVAD 164 Query: 64 ELWLKINSEYAT 75 +NS+ A Sbjct: 165 NCDFCLNSKLAK 176 >gi|324111908|gb|EGC05888.1| 4Fe-4S binding domain-containing protein [Escherichia fergusonii B253] Length = 138 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C C+ C VCPV + + CI C C CP A++ + Sbjct: 32 AFTTAVACHQCEDAPCANVCPVQAIRRERGHIFVEQSRCIGCKSCMLACPFGAMRVVAQE 91 Query: 62 GLELWLKIN 70 +K + Sbjct: 92 SQVQAIKCD 100 >gi|320354301|ref|YP_004195640.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122803|gb|ADW18349.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfobulbus propionicus DSM 2032] Length = 251 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 9 CILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C CV VCP Y+ + + +CI C C CP +A + E Sbjct: 124 CNQCNEPPCVRVCPTVATYKDKTTGIVVMDSKKCIGCKTCMAACPYNARYFNEE 177 >gi|300936048|ref|ZP_07150995.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 21-1] gi|300458774|gb|EFK22267.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 21-1] Length = 192 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQSCPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|295689616|ref|YP_003593309.1| NADH-quinone oxidoreductase subunit I [Caulobacter segnis ATCC 21756] gi|295431519|gb|ADG10691.1| NADH-quinone oxidoreductase, chain I [Caulobacter segnis ATCC 21756] Length = 163 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIEAEPREDGSRRTTRYDIDMVKCIYCGLCQEACPVDAI 118 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 62 ERCIACKLCEAVCPAQAITIEAEPRED 88 >gi|238619159|ref|YP_002913984.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.16.4] gi|238380228|gb|ACR41316.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.16.4] Length = 612 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C CP + I CI CG C P CP AI Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAI 596 >gi|227873120|ref|ZP_03991412.1| possible [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus F0268] gi|227841014|gb|EEJ51352.1| possible [formate-C-acetyltransferase]-activating enzyme [Oribacterium sinus F0268] Length = 355 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C C+ CP Y E +A P++CI C C C +A Sbjct: 118 CIHCGD--CIPGCPTKAIYWEEGRVAFSPEKCIGCDQCIHACTHNA 161 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%) Query: 36 HPDE---CIDCGVCEPECPVDAIKPDT 59 +P+ CI CG C P CP AI + Sbjct: 111 NPETRALCIHCGDCIPGCPTKAIYWEE 137 >gi|91788043|ref|YP_548995.1| RnfABCDGE type electron transport complex subunit B [Polaromonas sp. JS666] gi|91697268|gb|ABE44097.1| electron transport complex, RnfABCDGE type, B subunit [Polaromonas sp. JS666] Length = 221 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIKPD----TEPG 62 CI C T C++ CP D + I P C C +C P CPVD I + T G Sbjct: 84 CIGC--TLCIKACPTDAIVGSNKMMHTVIEP-YCTGCELCIPVCPVDCISLENVSGTRTG 140 Query: 63 LELWLKINSEYA 74 W + ++ A Sbjct: 141 WSAWSQEAADTA 152 Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Query: 26 FYEGENFLAIHPDE-CIDCGVCEPECPVDAI 55 EG +AI + CI C +C CP DAI Sbjct: 69 GTEGPRGVAIIDEAWCIGCTLCIKACPTDAI 99 >gi|86359334|ref|YP_471226.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] gi|115502513|sp|Q2K3T7|NUOI2_RHIEC RecName: Full=NADH-quinone oxidoreductase subunit I 2; AltName: Full=NADH dehydrogenase I subunit I 2; AltName: Full=NDH-1 subunit I 2 gi|86283436|gb|ABC92499.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] Length = 188 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 68 CVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|15676175|ref|NP_273307.1| NADH dehydrogenase subunit I [Neisseria meningitidis MC58] gi|59802064|ref|YP_208776.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA 1090] gi|121634122|ref|YP_974367.1| NADH dehydrogenase subunit I [Neisseria meningitidis FAM18] gi|161870814|ref|YP_001599987.1| NADH dehydrogenase subunit I [Neisseria meningitidis 053442] gi|194099639|ref|YP_002002770.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae NCCP11945] gi|218767059|ref|YP_002341571.1| NADH dehydrogenase subunit I [Neisseria meningitidis Z2491] gi|225077027|ref|ZP_03720226.1| hypothetical protein NEIFLAOT_02079 [Neisseria flavescens NRL30031/H210] gi|240014994|ref|ZP_04721907.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae DGI18] gi|240017442|ref|ZP_04723982.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA6140] gi|240081581|ref|ZP_04726124.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae FA19] gi|240113863|ref|ZP_04728353.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae MS11] gi|240116594|ref|ZP_04730656.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID18] gi|240118818|ref|ZP_04732880.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID1] gi|240122063|ref|ZP_04735025.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID24-1] gi|240124357|ref|ZP_04737313.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae PID332] gi|240126569|ref|ZP_04739455.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae SK-92-679] gi|240129034|ref|ZP_04741695.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae SK-93-1035] gi|241760745|ref|ZP_04758837.1| NADH-quinone oxidoreductase, i subunit [Neisseria flavescens SK114] gi|254494618|ref|ZP_05107789.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 1291] gi|254805706|ref|YP_003083927.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha14] gi|255067292|ref|ZP_05319147.1| NADH dehydrogenase, I subunit [Neisseria sicca ATCC 29256] gi|260439645|ref|ZP_05793461.1| NADH dehydrogenase subunit I [Neisseria gonorrhoeae DGI2] gi|261364357|ref|ZP_05977240.1| NADH dehydrogenase, I subunit [Neisseria mucosa ATCC 25996] gi|261378531|ref|ZP_05983104.1| NADH dehydrogenase, I subunit [Neisseria cinerea ATCC 14685] gi|268685149|ref|ZP_06152011.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-92-679] gi|298370371|ref|ZP_06981687.1| NADH dehydrogenase (ubiquinone), I subunit [Neisseria sp. oral taxon 014 str. F0314] gi|75355482|sp|Q5F623|NUOI_NEIG1 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81542192|sp|Q9JQM2|NUOI_NEIMA RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|81832764|sp|Q7DDS1|NUOI_NEIMB RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|156633533|sp|A1KRT1|NUOI_NEIMF RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|7225474|gb|AAF40705.1| NADH dehydrogenase I, I subunit [Neisseria meningitidis MC58] gi|59718959|gb|AAW90364.1| putative NADH dehydrogenase I chain I [Neisseria gonorrhoeae FA 1090] gi|120865828|emb|CAM09560.1| NADH dehydrogenase I chain I [Neisseria meningitidis FAM18] gi|121051067|emb|CAM07337.1| NADH dehydrogenase I chain I [Neisseria meningitidis Z2491] gi|161596367|gb|ABX74027.1| NADH dehydrogenase I chain I [Neisseria meningitidis 053442] gi|193934929|gb|ACF30753.1| NADH dehydrogenase I chain I [Neisseria gonorrhoeae NCCP11945] gi|224951584|gb|EEG32793.1| hypothetical protein NEIFLAOT_02079 [Neisseria flavescens NRL30031/H210] gi|226513658|gb|EEH63003.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae 1291] gi|241318926|gb|EER55452.1| NADH-quinone oxidoreductase, i subunit [Neisseria flavescens SK114] gi|254669248|emb|CBA08124.1| NADH dehydrogenase I chain I [Neisseria meningitidis alpha14] gi|254670964|emb|CBA07648.1| NADH-ubiquinone oxidoreductase, chain I [Neisseria meningitidis alpha153] gi|254674112|emb|CBA09896.1| NADH-ubiquinone oxidoreductase, chain I [Neisseria meningitidis alpha275] gi|255048443|gb|EET43907.1| NADH dehydrogenase, I subunit [Neisseria sicca ATCC 29256] gi|268625433|gb|EEZ57833.1| NADH-quinone oxidoreductase subunit I [Neisseria gonorrhoeae SK-92-679] gi|269145081|gb|EEZ71499.1| NADH dehydrogenase, I subunit [Neisseria cinerea ATCC 14685] gi|288567621|gb|EFC89181.1| NADH dehydrogenase, I subunit [Neisseria mucosa ATCC 25996] gi|298281831|gb|EFI23320.1| NADH dehydrogenase (ubiquinone), I subunit [Neisseria sp. oral taxon 014 str. F0314] gi|316985179|gb|EFV64131.1| NADH-quinone oxidoreductase subunit 9 [Neisseria meningitidis H44/76] gi|319411266|emb|CBY91673.1| NADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I; NDH-1, chain I) [Neisseria meningitidis WUE 2594] gi|325129047|gb|EGC51897.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis N1568] gi|325131604|gb|EGC54311.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M6190] gi|325135054|gb|EGC57682.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M13399] gi|325137077|gb|EGC59673.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M0579] gi|325139141|gb|EGC61687.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis ES14902] gi|325141087|gb|EGC63590.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis CU385] gi|325143091|gb|EGC65438.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis 961-5945] gi|325143161|gb|EGC65507.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis 961-5945] gi|325145244|gb|EGC67523.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240013] gi|325145315|gb|EGC67593.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240013] gi|325197536|gb|ADY92992.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis G2136] gi|325199454|gb|ADY94909.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis H44/76] gi|325202921|gb|ADY98375.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240149] gi|325203367|gb|ADY98820.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M01-240355] gi|325205336|gb|ADZ00789.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis M04-240196] gi|325207280|gb|ADZ02732.1| NADH:ubiquinone dehydrogenase, I subunit [Neisseria meningitidis NZ-05/33] Length = 159 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|150017686|ref|YP_001309940.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149904151|gb|ABR34984.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Clostridium beijerinckii NCIMB 8052] Length = 260 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 ++VT+NC CK C +VCP + H +C C C CP +AI +E Sbjct: 183 FIVTDNCTSCKV--CEKVCPANNIKVNNKPEFSH--KCEVCLACIHHCPQNAIHLKSEKS 238 Query: 63 LELWLKINSEY 73 ++ N + Sbjct: 239 KARFINQNVQL 249 >gi|288559598|ref|YP_003423084.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] gi|288542308|gb|ADC46192.1| tungsten formylmethanofuran dehydrogenase subunit F FwdF [Methanobrevibacter ruminantium M1] Length = 367 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIK 56 V E CI C C E+CP + GE + I ++C+ C VC+ CPVDAIK Sbjct: 172 VDEEECIYCG--ACAELCPAEAIVVDKATGEESIVIDKEKCVYCLVCKKACPVDAIK 226 Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 12/68 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAIK 56 + C+ CK C CP + + + +ECI CG C CP +AI Sbjct: 136 DKCLFCK--KCEAACPRESITIDRKLPNRADLVTGEIEVDEEECIYCGACAELCPAEAIV 193 Query: 57 PDTEPGLE 64 D G E Sbjct: 194 VDKATGEE 201 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 10/56 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDA 54 E C C C++VCP + + L D CI CG C CP +A Sbjct: 287 EKCGTCG--ACIDVCPCNVLSFPKSTGPGDRGTHLVKEEDYCIHCGACAKVCPNEA 340 Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF---LAIHPDECIDCGVCEPECP 51 +E CI C C VCP D + F L I ++C CG C CP Sbjct: 254 SETCIKCGW--CEGVCPADAATVKQAFKGTLEIDEEKCGTCGACIDVCP 300 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 20/66 (30%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFL-----------AIHPDECIDCGVCEP 48 E C+ C C + CPVD GE L I + CI CG CE Sbjct: 208 EKCVYCLV--CKKACPVDAIKAVCRSCSYGEYDLDPAKAAITGNAIIDSETCIKCGWCEG 265 Query: 49 ECPVDA 54 CP DA Sbjct: 266 VCPADA 271 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 19/35 (54%) Query: 30 ENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 E L+ C+ CG+CE CPV+AI D +E Sbjct: 22 ERVLSFKDHVCVGCGLCEATCPVEAISLDEVAPIE 56 >gi|281358583|ref|ZP_06245062.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] gi|281314931|gb|EFA98965.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] Length = 369 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 CI C +C E I +C+ CG C CP DAI+P Sbjct: 198 CIG--SRACARICAHGAPTFSEGKAEIDHAKCVGCGRCIGVCPKDAIQP 244 >gi|212635176|ref|YP_002311701.1| electron transport complex protein RnfB [Shewanella piezotolerans WP3] gi|226735433|sp|B8CM57|RNFB_SHEPW RecName: Full=Electron transport complex protein rnfB gi|212556660|gb|ACJ29114.1| Electron transport complex, RnfABCDGE type, B subunit [Shewanella piezotolerans WP3] Length = 189 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 ++ + CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 107 AFIREDECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|254449936|ref|ZP_05063373.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 238] gi|198264342|gb|EDY88612.1| cytochrome c oxidase accessory protein CcoG [Octadecabacter antarcticus 238] Length = 441 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 9/44 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV VCPV +G+ ECI CG+C C Sbjct: 222 DCIDC--MACVNVCPVGIDIRDGQQM------ECITCGLCIDAC 257 Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 26/71 (36%) Query: 17 CVEVCP---VDCFYEGENFLAI-----------HPDE---------CIDCGVCEPECPVD 53 C+ CP + E+ + I H D CIDC C CPV Sbjct: 177 CIYACPWPRIQAAMMDEDTITIGYRSWRGEPRKHSDAITKETPQGDCIDCMACVNVCPVG 236 Query: 54 AIKPDTEPGLE 64 D G + Sbjct: 237 ---IDIRDGQQ 244 >gi|170757405|ref|YP_001780996.1| iron-sulfur cluster-binding protein [Clostridium botulinum B1 str. Okra] gi|169122617|gb|ACA46453.1| iron-sulfur cluster-binding protein [Clostridium botulinum B1 str. Okra] Length = 425 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIH--------PDECIDCGVCEPECPVDAIK 56 + C+ C C +VCP++ E L H D C+ CGVC C +AIK Sbjct: 292 DRCVGCG--KCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIK 347 Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 35 IHPDECIDCGVCEPECPVDAIK 56 I D C+ CG C CP++AIK Sbjct: 289 IDKDRCVGCGKCTKVCPMEAIK 310 >gi|160938700|ref|ZP_02086052.1| hypothetical protein CLOBOL_03595 [Clostridium bolteae ATCC BAA-613] gi|158438399|gb|EDP16158.1| hypothetical protein CLOBOL_03595 [Clostridium bolteae ATCC BAA-613] Length = 361 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 T+ C+ CK C VC D + + D+C CG+C CP A+ + P E Sbjct: 288 TKKCVSCK--KCETVCCYDARKLTFPEMTVDMDKCRCCGLCLDVCPTGALTAELAPQTEK 345 Query: 66 WLKI 69 L++ Sbjct: 346 DLEL 349 >gi|153832369|ref|ZP_01985036.1| iron-sulfur cluster-binding protein [Vibrio harveyi HY01] gi|156974556|ref|YP_001445463.1| ferredoxin [Vibrio harveyi ATCC BAA-1116] gi|148871398|gb|EDL70261.1| iron-sulfur cluster-binding protein [Vibrio harveyi HY01] gi|156526150|gb|ABU71236.1| hypothetical protein VIBHAR_02274 [Vibrio harveyi ATCC BAA-1116] Length = 553 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|82543958|ref|YP_407905.1| hypothetical protein SBO_1458 [Shigella boydii Sb227] gi|81245369|gb|ABB66077.1| putative oxidoreductase, Fe-S subunit [Shigella boydii Sb227] Length = 225 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECP 51 + C CK C+ VCP+ + E + + CI C C CP Sbjct: 120 ADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACP 167 >gi|331268947|ref|YP_004395439.1| polyferredoxin [Clostridium botulinum BKT015925] gi|329125497|gb|AEB75442.1| polyferredoxin [Clostridium botulinum BKT015925] Length = 288 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV+ CP + N I +C++CG+C +CP AI+ Sbjct: 216 CIGCGL--CVKACPKEAIKLENNLPVIDYSKCVNCGLCAMKCPTKAIQ 261 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + CV C D + ++ D C+ CG C CP I+ Sbjct: 144 GYGSCVSACKFDAIEIVDGIAKVNKDNCVACGACVSTCPKGVIE 187 Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 18/81 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAI---------------HPDECIDCGVCE 47 V +NC+ C CV CP L I CI CG+C Sbjct: 166 VNKDNCVACG--ACVSTCPKGVIELVPQKQLVIVSCNSHDRGLDVKNTCSTGCIGCGLCV 223 Query: 48 PECPVDAIKPDTEPGLELWLK 68 CP +AIK + + + K Sbjct: 224 KACPKEAIKLENNLPVIDYSK 244 >gi|315923092|ref|ZP_07919332.1| ferredoxin [Bacteroides sp. D2] gi|313696967|gb|EFS33802.1| ferredoxin [Bacteroides sp. D2] Length = 514 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 14/79 (17%) Query: 1 MTYV--VTENCI----LCKHTDCVEVCPVDCFYEGE--NFLAI---HPDECIDCGVCEPE 49 M YV + ENCI C E CP + L I + + C+ CG CE Sbjct: 417 MGYVVFIEENCIVYTDGTSCGACSEHCPTQAVAMVPYKDGLTIPHVNKEICVGCGGCEYV 476 Query: 50 CPV---DAIKPDTEPGLEL 65 CP AI + P + Sbjct: 477 CPARPFRAIYIEGNPVQKE 495 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 20/63 (31%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE---------NFLAIHPDECI------DCGVCEPECPV 52 +C +C VCP ++ + CI CG C CP Sbjct: 391 DCTVCGD-----VCPNGAILPINVEQKHLTQMGYVVFIEENCIVYTDGTSCGACSEHCPT 445 Query: 53 DAI 55 A+ Sbjct: 446 QAV 448 Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 4/49 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T C C C C C E+ AI C+DC C C A Sbjct: 223 TAKCNGCGL--CATKCKAACINSKEH--AIDYSRCVDCFNCLGACKQKA 267 >gi|304314189|ref|YP_003849336.1| indolepyruvate oxidoreductase, subunit alpha [Methanothermobacter marburgensis str. Marburg] gi|313104116|sp|P80910|IORA_METTM RecName: Full=Indolepyruvate oxidoreductase subunit iorA; Short=IOR; AltName: Full=Indolepyruvate ferredoxin oxidoreductase subunit alpha gi|302587648|gb|ADL58023.1| indolepyruvate oxidoreductase, subunit alpha [Methanothermobacter marburgensis str. Marburg] Length = 618 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E C LC CP E + + I P C C +C CP AIKP+ Sbjct: 563 VDEEKCDLCLECLNELACP--AIVEEDGRVFIDPLYCRGCTICLQICPAGAIKPE 615 >gi|227498571|ref|ZP_03928715.1| nitroreductase [Acidaminococcus sp. D21] gi|226904027|gb|EEH89945.1| nitroreductase [Acidaminococcus sp. D21] Length = 270 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 16/100 (16%) Query: 1 MTYVVT---ENCILCKHTDCVEVCPVDCFYE--GENFLAIHPDECIDCGVCEPECPVDA- 54 M ++T E C C C +VCP C E E + I+ C+ CG C CP A Sbjct: 1 MAGIITIDKEKCTRCG--TCAKVCP-SCILEMDTEGPVCINDLSCMSCGHCVAVCPTGAL 57 Query: 55 -----IKPDTEPGLELWLKINS--EYATQWPNITTKKESL 87 K + +P L ++ E+ Q +I ++ L Sbjct: 58 DNSRCPKAEMDPITRPMLDPDTALEFLRQRRSIRNFRDEL 97 >gi|242278400|ref|YP_002990529.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio salexigens DSM 2638] gi|242121294|gb|ACS78990.1| electron transport complex, RnfABCDGE type, B subunit [Desulfovibrio salexigens DSM 2638] Length = 704 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 15 TDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIK 56 CV+VC D E+ + + + C+ CG C CP AI+ Sbjct: 142 GSCVKVCGFDAIRLNEDGVPVVDMNACVSCGKCAEVCPTGAIR 184 >gi|218961542|ref|YP_001741317.1| putative ferredoxin, 4Fe-4S; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730199|emb|CAO81111.1| putative ferredoxin, 4Fe-4S; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 184 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 9/60 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEP-------ECPVDAIK 56 V + CI CK C+ CP I +C CG+C CPV A+ Sbjct: 123 VNKDLCIGCKL--CIRYCPEGAISIKNGKAVIDTTKCTACGICSDGNNKNFSGCPVGAVF 180 >gi|84490254|ref|YP_448486.1| flavoprotein [Methanosphaera stadtmanae DSM 3091] gi|84373573|gb|ABC57843.1| predicted flavoprotein [Methanosphaera stadtmanae DSM 3091] Length = 235 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 Y+ E C C CP + E I+ +CI C C+ CP AI +T+ Sbjct: 141 PYIDKEKCKKCTPCPAQRSCPTNAIIPPE----INTIKCISCKKCKETCPYHAI--NTDK 194 Query: 62 GLELWL-KINSEYATQWPNI 80 ++L++ +I+++ + I Sbjct: 195 QIKLYIRQIDAQNTKKLETI 214 >gi|150388820|ref|YP_001318869.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149948682|gb|ABR47210.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Alkaliphilus metalliredigens QYMF] Length = 360 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C +C+ CP + ++ + I + C CG+C+ CP AI Sbjct: 30 AEPCRICQDH-----CPSEAISLTKSCVEIDEEVCKGCGICKSTCPSQAI 74 >gi|94985024|ref|YP_604388.1| NADH-quinone oxidoreductase, chain I [Deinococcus geothermalis DSM 11300] gi|115502526|sp|Q1IZW5|NUOI_DEIGD RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|94555305|gb|ABF45219.1| NADH dehydrogenase subunit I [Deinococcus geothermalis DSM 11300] Length = 179 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------------EGENF---LAIHPDECIDCGVCEPEC 50 E CI C + C VCP Y GE + I+ CI CG+CE C Sbjct: 52 EKCIGC--SLCAAVCPAYAIYVEAAENDPLNPTSPGERYAKVYEINMLRCIFCGLCEEAC 109 Query: 51 PVDAIKPDTEPGLELW 66 P A+ E + + Sbjct: 110 PTGAVVLGNEFEMADY 125 >gi|332558535|ref|ZP_08412857.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] gi|332276247|gb|EGJ21562.1| NADH dehydrogenase subunit I [Rhodobacter sphaeroides WS8N] Length = 164 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF----YEGENF------LAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC E + I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAAACPVDCIDVVKAETPDGRWYPESFRINFARCIFCGYCEEACPTSAIQ 106 Query: 57 PDTEPGLELW 66 + L + Sbjct: 107 LTPDVELADY 116 >gi|284997007|ref|YP_003418774.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Sulfolobus islandicus L.D.8.5] gi|284444902|gb|ADB86404.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Sulfolobus islandicus L.D.8.5] Length = 612 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C CP + I CI CG C P CP AI Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAI 596 >gi|253681199|ref|ZP_04861997.1| hydrogen dehydrogenase [Clostridium botulinum D str. 1873] gi|253562437|gb|EES91888.1| hydrogen dehydrogenase [Clostridium botulinum D str. 1873] Length = 448 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 17 CVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C + CP D + N I D+C DCG C CP +I E Sbjct: 94 CQKSCPFDAILVDKNTNSTYISLDKCTDCGFCVNACPTGSILDKVE 139 >gi|229584184|ref|YP_002842685.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.16.27] gi|228019233|gb|ACP54640.1| thiamine pyrophosphate protein domain protein TPP-binding [Sulfolobus islandicus M.16.27] Length = 612 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C CP + I CI CG C P CP AI Sbjct: 549 EKCTGCSICYDYFTCPA-IIPRKDKKAEIDNYTCIGCGACIPVCPFKAI 596 >gi|198273884|ref|ZP_03206416.1| hypothetical protein BACPLE_00018 [Bacteroides plebeius DSM 17135] gi|198272962|gb|EDY97231.1| hypothetical protein BACPLE_00018 [Bacteroides plebeius DSM 17135] Length = 399 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C C + CP + + P C CG C CP +A Sbjct: 14 DACTQCG--ICADSCPFGAIQF-NEYPEVDPYSCRLCGTCVQACPAEA 58 Score = 41.3 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLELW 66 D C CG+C CP AI+ + P ++ + Sbjct: 14 DACTQCGICADSCPFGAIQFNEYPEVDPY 42 >gi|189465837|ref|ZP_03014622.1| hypothetical protein BACINT_02199 [Bacteroides intestinalis DSM 17393] gi|189434101|gb|EDV03086.1| hypothetical protein BACINT_02199 [Bacteroides intestinalis DSM 17393] Length = 373 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEPGL 63 TENCI C CV+ C D + I +C+ CG C C D AI D + Sbjct: 193 TENCIGCN--ICVKHCAHDAVHLNAGRKAEIDYAKCVGCGQCVALCQYDGAIMGDEDTSE 250 Query: 64 ELWLKINSEYA 74 L KI +EY+ Sbjct: 251 RLNYKI-AEYS 260 >gi|167625038|ref|YP_001675332.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355060|gb|ABZ77673.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella halifaxensis HAW-EB4] Length = 190 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA--IKPDTEPGLE 64 +C C++ CV+VCP Y ++ + I+ +C+ C C CP I P+T + Sbjct: 59 SCEQCENAPCVKVCPTGAAYVNDDGIVSINEKKCVGCLYCVAACPYKVRFINPETRVPDK 118 >gi|91223727|ref|ZP_01258991.1| iron-sulfur cluster-binding protein [Vibrio alginolyticus 12G01] gi|91191219|gb|EAS77484.1| iron-sulfur cluster-binding protein [Vibrio alginolyticus 12G01] Length = 553 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDRTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 C LC CV VCP + L +CI CG+CE CP Sbjct: 420 CTLC--MSCVAVCPTRALHTDGRSPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDRTGHRIEIN 213 >gi|78044751|ref|YP_359335.1| molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996866|gb|ABB15765.1| molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 198 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENF-LAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + V C+ C+ C+ +CP + EN + ++ D C+ C C CP A + Sbjct: 54 HFVPTICMHCEEPACLTICPSQATFRDENGSILVNYDTCLGCKACMAACPYGARYVYDKN 113 Query: 62 GLELWLKINSEYATQ 76 + +I+ E + Sbjct: 114 DVAKNREIHGELSQH 128 >gi|331664457|ref|ZP_08365363.1| putative electron transport protein YgfS [Escherichia coli TA143] gi|331058388|gb|EGI30369.1| putative electron transport protein YgfS [Escherichia coli TA143] Length = 151 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 56 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 110 >gi|291284206|ref|YP_003501024.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. CB9615] gi|293416139|ref|ZP_06658779.1| electron transporter ygfS [Escherichia coli B185] gi|290764079|gb|ADD58040.1| Putative electron transport protein ygfS [Escherichia coli O55:H7 str. CB9615] gi|291432328|gb|EFF05310.1| electron transporter ygfS [Escherichia coli B185] gi|320662090|gb|EFX29491.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. USDA 5905] Length = 162 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|254488246|ref|ZP_05101451.1| NADH-quinone oxidoreductase chain i [Roseobacter sp. GAI101] gi|214045115|gb|EEB85753.1| NADH-quinone oxidoreductase chain i [Roseobacter sp. GAI101] Length = 164 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRDD 89 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|198284338|ref|YP_002220659.1| NADH dehydrogenase subunit I [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668010|ref|YP_002427000.1| NADH-quinone oxidoreductase, I subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248859|gb|ACH84452.1| NADH-quinone oxidoreductase, chain I [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520223|gb|ACK80809.1| NADH-quinone oxidoreductase, I subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 163 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+CE CPVD+I Sbjct: 62 ERCIACKL--CEAVCPALAITIESDVRSDGTRRTTRYDIDLSKCIFCGLCEESCPVDSI 118 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 + CI C +CE CP AI +++ Sbjct: 62 ERCIACKLCEAVCPALAITIESD 84 >gi|116075769|ref|ZP_01473028.1| hypothetical protein RS9916_39926 [Synechococcus sp. RS9916] gi|116067084|gb|EAU72839.1| hypothetical protein RS9916_39926 [Synechococcus sp. RS9916] Length = 352 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 2/87 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C C+ VCP + + + + C CG C P CP+ I + Sbjct: 97 QQCPTSCPRPCMRVCPAEAIPSLPSTVGVDAARCYGCGRCLPACPLGLIVAHD--HQQSR 154 Query: 67 LKINSEYATQWPNITTKKESLPSAAKM 93 + S AT P+ + + Sbjct: 155 EDLGSLLATLTPDAVEVHTAPGRGLEF 181 >gi|304313915|ref|YP_003849062.1| tungsten formylmethanofuran dehydrogenase, subunit F [Methanothermobacter marburgensis str. Marburg] gi|1890207|emb|CAA61210.1| tungsten formylmethanofuran dehydrogenase [Methanothermobacter thermautotrophicus] gi|302587374|gb|ADL57749.1| tungsten formylmethanofuran dehydrogenase, subunit F [Methanothermobacter marburgensis str. Marburg] Length = 349 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 12/64 (18%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C CP D + I D CI CG+CE CPVDAI+ Sbjct: 113 ETCIQCK--ACETACPQDAITITRELPERKDLITGEIEIDKDTCIYCGMCEEMCPVDAIE 170 Query: 57 PDTE 60 + + Sbjct: 171 IEHQ 174 Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 18/67 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY----------------EGENFLAIHPDECIDCGVCE 47 V + C+ C C +CPVD E I P+ C++CG C+ Sbjct: 189 VDEDKCVHCG--ICKRICPVDAIMQVCRICPYGEYEIKVPEVTGTSYIDPELCVNCGWCQ 246 Query: 48 PECPVDA 54 CPVDA Sbjct: 247 EICPVDA 253 Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 10/58 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY--------EGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C+ CV CP + E L CI CG CE CPV+AI+ Sbjct: 269 DTCQACE--TCVMACPCNVLSFPKPEKSGEKPTKLYKDERFCIYCGACERSCPVNAIE 324 Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDC-----FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 +Y+ E C+ C C E+CPVD +EGE L I D C C C CP + + Sbjct: 232 SYIDPELCVNCGW--CQEICPVDAATVTKPFEGE--LIIDQDTCQACETCVMACPCNVLS 287 Query: 57 PDTEP 61 Sbjct: 288 FPKPE 292 Score = 40.1 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-----------IHPDECIDCGVCEPECPVDAI 55 + CI C C E+CPVD + + D+C+ CG+C+ CPVDAI Sbjct: 152 DTCIYCG--MCEEMCPVDAIEIEHQIPSSSSPTVATDINVDEDKCVHCGICKRICPVDAI 209 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 23/72 (31%), Gaps = 17/72 (23%) Query: 9 CILCKHTDCVEVCPVDC---------FYEGENF------LAIHPDECIDCGVCEPECPVD 53 C+LC C +CP E + I + CI C CE CP D Sbjct: 71 CVLCG--MCSSICPFQALDLQIDGTSIKELAEYPKILKSAEIDDETCIQCKACETACPQD 128 Query: 54 AIKPDTEPGLEL 65 AI E Sbjct: 129 AITITRELPERK 140 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 5 VTENCILCKHTDCVEVCPVDCFY-----------EGENFLAIHPDECIDCGVCEPECPVD 53 + ++C+ C E+CPV + E+ + I ++C+ CG+C CP Sbjct: 25 IFQDCLCAVCGLCGEICPVSAIEVNPTGAMVRTEQDESKILIDENKCVLCGMCSSICPFQ 84 Query: 54 A 54 A Sbjct: 85 A 85 >gi|21674083|ref|NP_662148.1| ferredoxin, 4Fe-4S [Chlorobium tepidum TLS] gi|25452953|sp|Q8KCZ7|FER2_CHLTE RecName: Full=Ferredoxin-2; AltName: Full=Ferredoxin II; Short=FdII gi|21647237|gb|AAM72490.1| ferredoxin, 4Fe-4S [Chlorobium tepidum TLS] Length = 62 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M + +T+ C C C CPV G++ I + C+DC C CPVD Sbjct: 1 MAHRITDECTYC--AACEPECPVSAISAGDSIYVIDENVCVDCIGYHDEPACVAVCPVDC 58 Query: 55 I 55 I Sbjct: 59 I 59 >gi|325959692|ref|YP_004291158.1| NiL domain-containing protein [Methanobacterium sp. AL-21] gi|325331124|gb|ADZ10186.1| NIL domain-containing protein [Methanobacterium sp. AL-21] Length = 128 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPD-ECIDCGVCEPECPVDAIK 56 E CI C CV +CPV +++ D ECI C +C CP AIK Sbjct: 77 EMCIDCG--ACVSLCPVHAIIVEDDWTVEVKDKECIGCKLCSYSCPTKAIK 125 Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 + CIDCG C CPV AI + + Sbjct: 75 DEEMCIDCGACVSLCPVHAIIVEDD 99 >gi|320668652|gb|EFX35457.1| electron transport complex protein RnfB [Escherichia coli O157:H7 str. LSU-61] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|303242578|ref|ZP_07329055.1| NADH dehydrogenase (quinone) [Acetivibrio cellulolyticus CD2] gi|302589882|gb|EFL59653.1| NADH dehydrogenase (quinone) [Acetivibrio cellulolyticus CD2] Length = 624 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAI 55 C C + C +CPV+ + I +CI CG C C AI Sbjct: 576 CKGC--SKCSRICPVNAISGKVKEPYVIDQSKCIKCGACVGSCAFHAI 621 >gi|302391750|ref|YP_003827570.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] gi|302203827|gb|ADL12505.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Acetohalobium arabaticum DSM 5501] Length = 159 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + C+ C+ C+EVCPVD Y + + D C C +C CP + + E Sbjct: 49 IPMMCMHCEDAACMEVCPVDAIYRDVETGAVLVDHDRCFGCKLCVSACPFGNVTYNLETK 108 Query: 63 L 63 Sbjct: 109 Q 109 >gi|296132680|ref|YP_003639927.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermincola sp. JR] gi|296031258|gb|ADG82026.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Thermincola potens JR] Length = 560 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENF----LA-----IHPDECIDCGVCEPECPV 52 YV C++C C CP + L ++P C CG+C ECP Sbjct: 481 PYVDASKCVVCL--TCYRCCPHKAITIAYDRQFNNLYRSAAQVNPLACRRCGICAAECPA 538 Query: 53 DAIKPDTEPGLELWLKINS 71 AI L++ ++++ Sbjct: 539 KAIHLPGYTDLQILAQLDA 557 >gi|254283716|ref|ZP_04958684.1| NADH dehydrogenase i, i subunit [gamma proteobacterium NOR51-B] gi|219679919|gb|EED36268.1| NADH dehydrogenase i, i subunit [gamma proteobacterium NOR51-B] Length = 175 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 12/60 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG+CE CP +AI+ Sbjct: 53 ERCVACNL--CAVACPVDCIALQQATKEDGRWYPEFFRINFSRCIMCGMCEEACPTNAIQ 110 >gi|206901296|ref|YP_002251606.1| hypothetical protein DICTH_1795 [Dictyoglomus thermophilum H-6-12] gi|206740399|gb|ACI19457.1| conserved protein [Dictyoglomus thermophilum H-6-12] Length = 378 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + CI C C CP + I +CI C C CP AI+ + Sbjct: 315 VIEDKKCIKC--RICENSCPNKAITYTPEGMIIDYKKCISCFCCHELCPQKAIRLE 368 >gi|197118878|ref|YP_002139305.1| aldo/keto reductase family oxidoreductase [Geobacter bemidjiensis Bem] gi|197088238|gb|ACH39509.1| oxidoreductase, aldo/keto reductase family [Geobacter bemidjiensis Bem] Length = 316 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 C C CV C D + + ECI CG C CP Sbjct: 269 CKGCG--ACVPACTNDALRLVDGKAVVDEAECILCGYCGAACP 309 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 13/26 (50%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAIK 56 LAI C CG C P C DA++ Sbjct: 260 RKLAIMEAFCKGCGACVPACTNDALR 285 >gi|158522287|ref|YP_001530157.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfococcus oleovorans Hxd3] gi|158511113|gb|ABW68080.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Desulfococcus oleovorans Hxd3] Length = 776 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 7/49 (14%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-----FLAIHPDECIDCGVCEPECP 51 NC C CV CP E + CI CG C CP Sbjct: 716 NCRDCG--ICVTACPQSAISRAEKPDSGFAYEVDETLCIGCGFCAGACP 762 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%) Query: 40 CIDCGVCEPECPVDAIKPDTEPG 62 C DCG+C CP AI +P Sbjct: 717 CRDCGICVTACPQSAISRAEKPD 739 >gi|126700799|ref|YP_001089696.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile 630] gi|254976768|ref|ZP_05273240.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-66c26] gi|255094153|ref|ZP_05323631.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile CIP 107932] gi|255102322|ref|ZP_05331299.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-63q42] gi|255308215|ref|ZP_05352386.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile ATCC 43255] gi|255315904|ref|ZP_05357487.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-76w55] gi|255518564|ref|ZP_05386240.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-97b34] gi|255651684|ref|ZP_05398586.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-37x79] gi|260684718|ref|YP_003216003.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile CD196] gi|260688376|ref|YP_003219510.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291] gi|306521483|ref|ZP_07407830.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile QCD-32g58] gi|115252236|emb|CAJ70076.1| Dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile] gi|260210881|emb|CBA66039.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile CD196] gi|260214393|emb|CBE06800.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291] Length = 369 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 VV +N CI CK CV C + E + L I D+C CG+C CP A Sbjct: 308 VVDDNKCIKCKQ--CVTSCVYEAL-EVTDKLNIDADKCFGCGLCVTRCPKGA 356 >gi|21231826|ref|NP_637743.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768048|ref|YP_242810.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|188991179|ref|YP_001903189.1| Putative ferredoxin [Xanthomonas campestris pv. campestris str. B100] gi|21113541|gb|AAM41667.1| ferredoxin [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573380|gb|AAY48790.1| ferredoxin [Xanthomonas campestris pv. campestris str. 8004] gi|167732939|emb|CAP51135.1| Putative ferredoxin [Xanthomonas campestris pv. campestris] Length = 94 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + E C+ C C CP GE I P C +C C CPV+ Sbjct: 1 MSLKINELCVNCDV--CEPACPNQAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVEC 58 Query: 55 IKPD--TEPGLELWLKINSEYATQWPNITTKKESLP 88 I PD + L + P + ++ P Sbjct: 59 IDPDPAIPETHDQLLAKLIQLQRDHPELYEQEPPAP 94 >gi|11466496|ref|NP_044745.1| NADH dehydrogenase subunit 8 [Reclinomonas americana] gi|6225784|sp|O21233|NDUS8_RECAM RecName: Full=NADH-ubiquinone oxidoreductase subunit 8 gi|2258326|gb|AAD11860.1| NADH dehydrogenase subunit 8 [Reclinomonas americana] Length = 162 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIESEPRIDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 117 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 15/24 (62%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI ++EP Sbjct: 61 ERCIACKLCEAICPAQAITIESEP 84 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 102 CIYCGF--CQEACPVDAIVEGPNF 123 >gi|322830647|gb|EFZ33604.1| ribonuclease L inhibitor, putative [Trypanosoma cruzi] Length = 647 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 2 TYVVTENCILCK-HTDCVEVCPVD-----CFYEGENFLAIHP---DECIDCGVCEPECPV 52 V + C K +C + CPV+ C E + I + CI CG+C +CP Sbjct: 18 AVVNADRCKPSKCSLECSKCCPVNLQGKLCI-EVQKKSVISKISEELCIGCGLCVKKCPY 76 Query: 53 DAIK 56 AI+ Sbjct: 77 GAIQ 80 >gi|262382027|ref|ZP_06075165.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 2_1_33B] gi|262297204|gb|EEY85134.1| pyruvate-formate lyase-activating enzyme [Bacteroides sp. 2_1_33B] Length = 301 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV CPV + + C CG C CP A++ Sbjct: 52 CIGCG--ACVNACPVGALTLTQAGIVTDRSLCRTCGRCAEVCPTLAME 97 Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C L +CI CG C CPV A Sbjct: 26 CPLACVWCHNPEGISPRAEKLYTRK-KCIGCGACVNACPVGA 66 >gi|255526495|ref|ZP_05393405.1| (Formate-C-acetyltransferase)-activating enzyme [Clostridium carboxidivorans P7] gi|296185864|ref|ZP_06854270.1| radical SAM domain protein [Clostridium carboxidivorans P7] gi|255509814|gb|EET86144.1| (Formate-C-acetyltransferase)-activating enzyme [Clostridium carboxidivorans P7] gi|296049532|gb|EFG88960.1| radical SAM domain protein [Clostridium carboxidivorans P7] Length = 278 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C +CV+ CP E + +P++C DCG+C C Sbjct: 44 SCIQCG--ECVDNCPYGAISLVEKSVIWNPEKCEDCGLCVKIC 84 Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 3/23 (13%) Query: 36 HPDE---CIDCGVCEPECPVDAI 55 +P+ CI CG C CP AI Sbjct: 38 NPETIKSCIQCGECVDNCPYGAI 60 >gi|225569293|ref|ZP_03778318.1| hypothetical protein CLOHYLEM_05375 [Clostridium hylemonae DSM 15053] gi|225162092|gb|EEG74711.1| hypothetical protein CLOHYLEM_05375 [Clostridium hylemonae DSM 15053] Length = 374 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 E C+ C C +C D + I +C+ CG C CP DA+ P Sbjct: 194 EYCVGCG--ACQRICAHDAPVITDGKAYIDLHKCVGCGRCIGACPKDAVHP 242 >gi|224368764|ref|YP_002602925.1| iron-sulfur binding hydrogenase [Desulfobacterium autotrophicum HRM2] gi|223691480|gb|ACN14763.1| iron-sulfur binding hydrogenase [Desulfobacterium autotrophicum HRM2] Length = 548 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 +C C CV+VCP + + D CI G C CP + I P T P Sbjct: 17 DCNGCG--ACVKVCPTKAIRIKDGKSLLLVDNCIGGGECVTVCPQECITPTTAP 68 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 13/25 (52%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIK 56 +++ +C CG C CP AI+ Sbjct: 10 YVSFDSRDCNGCGACVKVCPTKAIR 34 >gi|190893221|ref|YP_001979763.1| NADH-ubiquinone oxidoreductase [Rhizobium etli CIAT 652] gi|190698500|gb|ACE92585.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] Length = 188 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 12/57 (21%) Query: 9 CILCKHTDCVEVCPVDCF----YEGEN------FLAIHPDECIDCGVCEPECPVDAI 55 C+ C+ C +CP DC YE E I C+ CG+CE CP DAI Sbjct: 68 CVACEL--CARICPCDCIEVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAI 122 >gi|166032525|ref|ZP_02235354.1| hypothetical protein DORFOR_02240 [Dorea formicigenerans ATCC 27755] gi|166026882|gb|EDR45639.1| hypothetical protein DORFOR_02240 [Dorea formicigenerans ATCC 27755] Length = 607 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Query: 3 YVVTENCILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +V ++CI CK C+ CP + + I C C +C CPV AI Sbjct: 550 HVDQDSCIGCK--KCIRDLGCP--AIVMNDGKICIDASMCTGCHLCSQVCPVCAI 600 >gi|218780081|ref|YP_002431399.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761465|gb|ACL03931.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 269 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 + E C LC CV++CP+ ++ + CI C C CPV+A + + Sbjct: 192 TIEETCTLCGD--CVDMCPMGAITIEDDAVKTDNMACILCCACIKGCPVNAREVNNPDIA 249 Query: 64 ELW 66 +++ Sbjct: 250 KIF 252 >gi|170724640|ref|YP_001758666.1| radical SAM domain-containing protein [Shewanella woodyi ATCC 51908] gi|169809987|gb|ACA84571.1| Radical SAM domain protein [Shewanella woodyi ATCC 51908] Length = 292 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCF-----YEGENFLAIHPDECIDCGVCEPECP 51 Y + + C C CV CPV+ EG++ + D C C +C CP Sbjct: 40 PYTI-DMCNSCGD--CVATCPVNALSLTSSKEGKSKIVWDSDLCTQCDICLSTCP 91 >gi|34557166|ref|NP_906981.1| molybdopterin oxidoreductase [Wolinella succinogenes DSM 1740] gi|34482882|emb|CAE09881.1| MOLYBDOPTERIN OXIDOREDUCTASE [Wolinella succinogenes] Length = 232 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 C C CV CP Y+ + + D+CI C C P I +++ W Sbjct: 59 CNHCDDAPCVRACPTGAMYKDKESGMTLHNADKCIGCKSCMLADPYHVIYYNSKQPHYKW 118 Query: 67 L 67 Sbjct: 119 T 119 >gi|193064953|ref|ZP_03046029.1| iron-sulfur cluster-binding protein [Escherichia coli E22] gi|194430516|ref|ZP_03062989.1| iron-sulfur cluster-binding protein [Escherichia coli B171] gi|194440073|ref|ZP_03072128.1| iron-sulfur cluster-binding protein [Escherichia coli 101-1] gi|301027651|ref|ZP_07190969.1| thiosulfate reductase electron transport protein phsb [Escherichia coli MS 196-1] gi|192927440|gb|EDV82058.1| iron-sulfur cluster-binding protein [Escherichia coli E22] gi|194411442|gb|EDX27791.1| iron-sulfur cluster-binding protein [Escherichia coli B171] gi|194420995|gb|EDX37027.1| iron-sulfur cluster-binding protein [Escherichia coli 101-1] gi|299879222|gb|EFI87433.1| thiosulfate reductase electron transport protein phsb [Escherichia coli MS 196-1] gi|323152823|gb|EFZ39093.1| hypothetical protein ECEPECA14_5180 [Escherichia coli EPECa14] gi|323163480|gb|EFZ49306.1| hypothetical protein ECE128010_0331 [Escherichia coli E128010] gi|323937274|gb|EGB33553.1| 4Fe-4S binding domain-containing protein [Escherichia coli E1520] gi|323962162|gb|EGB57757.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323973950|gb|EGB69122.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|16131444|ref|NP_418030.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. MG1655] gi|89110439|ref|AP_004219.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. W3110] gi|170018196|ref|YP_001723150.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Escherichia coli ATCC 8739] gi|170083082|ref|YP_001732402.1| hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. DH10B] gi|194435589|ref|ZP_03067692.1| 4Fe-4S binding domain protein [Escherichia coli 101-1] gi|238902663|ref|YP_002928459.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli BW2952] gi|253771592|ref|YP_003034423.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038761|ref|ZP_04872817.1| hydrogenase [Escherichia sp. 1_1_43] gi|254163497|ref|YP_003046605.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli B str. REL606] gi|256025698|ref|ZP_05439563.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia sp. 4_1_40B] gi|300950332|ref|ZP_07164264.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|300957613|ref|ZP_07169813.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|301017831|ref|ZP_07182476.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|301645991|ref|ZP_07245897.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|307140265|ref|ZP_07499621.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli H736] gi|3025305|sp|P56256|YSAA_ECOLI RecName: Full=Putative electron transport protein ysaA gi|2367245|gb|AAC76597.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. MG1655] gi|85676470|dbj|BAE77720.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K12 substr. W3110] gi|169753124|gb|ACA75823.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli ATCC 8739] gi|169890917|gb|ACB04624.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli str. K-12 substr. DH10B] gi|194425132|gb|EDX41116.1| 4Fe-4S binding domain protein [Escherichia coli 101-1] gi|226839267|gb|EEH71290.1| hydrogenase [Escherichia sp. 1_1_43] gi|238862459|gb|ACR64457.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli BW2952] gi|242379091|emb|CAQ33893.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli BL21(DE3)] gi|253322636|gb|ACT27238.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975398|gb|ACT41069.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli B str. REL606] gi|253979554|gb|ACT45224.1| predicted hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli BL21(DE3)] gi|260447409|gb|ACX37831.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Escherichia coli DH1] gi|299882652|gb|EFI90863.1| 4Fe-4S binding domain protein [Escherichia coli MS 196-1] gi|300315650|gb|EFJ65434.1| 4Fe-4S binding domain protein [Escherichia coli MS 175-1] gi|300450331|gb|EFK13951.1| 4Fe-4S binding domain protein [Escherichia coli MS 116-1] gi|301075743|gb|EFK90549.1| 4Fe-4S binding domain protein [Escherichia coli MS 146-1] gi|309703976|emb|CBJ03319.1| putative electron-transport protein [Escherichia coli ETEC H10407] gi|315138151|dbj|BAJ45310.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Escherichia coli DH1] gi|315618387|gb|EFU98974.1| iron-sulfur protein [Escherichia coli 3431] gi|323959390|gb|EGB55050.1| 4Fe-4S binding domain-containing protein [Escherichia coli H489] gi|323971335|gb|EGB66577.1| 4Fe-4S binding domain-containing protein [Escherichia coli TA007] Length = 157 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 C C+ C VCPVD + + CI C C CP A++ Sbjct: 57 ACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAME 105 >gi|330860328|emb|CBX70641.1| NADH-quinone oxidoreductase subunit I [Yersinia enterocolitica W22703] Length = 137 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F I+ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + + Sbjct: 116 LTPDFEMGEF 125 >gi|330446736|ref|ZP_08310388.1| formate dehydrogenase, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490927|dbj|GAA04885.1| formate dehydrogenase, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 290 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 +C+ C C++ CP D + EN + + ++C+ CG C CP D Sbjct: 99 SCMHCSDPGCLKACPEPDAIVQYENGVVDFNSEKCVGCGYCIAGCPFD 146 >gi|323492677|ref|ZP_08097821.1| iron-sulfur cluster-binding protein [Vibrio brasiliensis LMG 20546] gi|323313052|gb|EGA66172.1| iron-sulfur cluster-binding protein [Vibrio brasiliensis LMG 20546] Length = 554 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 10/69 (14%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 174 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 233 Query: 56 KPDTEPGLE 64 E Sbjct: 234 HYALPNPQE 242 Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+C CP Sbjct: 420 DCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCTKACP 463 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 167 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 214 >gi|298376250|ref|ZP_06986206.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] gi|298267287|gb|EFI08944.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] Length = 295 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP 57 V CI C C +CP ++F + C+ C CE CP +AIK Sbjct: 45 VKNKCIGCG--RCEAICPRGNIAIQDHFPVFNRQACVACKACERICPQNAIKF 95 >gi|295096018|emb|CBK85108.1| electron transport complex, RnfABCDGE type, B subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 4 VVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 V+ E NCI C T C++ CPVD + + D C C +C CP I+ Sbjct: 111 VIDEANCIGC--TKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQCIE 163 Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Query: 18 VEVCPVDCFYEGEN----FLAIHPDECIDCGVCEPECPVDAI 55 V+ PVD + + I CI C C CPVDAI Sbjct: 91 VDPQPVDGDEQAQEPVRALAVIDEANCIGCTKCIQACPVDAI 132 >gi|294141107|ref|YP_003557085.1| electron transport complex protein rnfB [Shewanella violacea DSS12] gi|293327576|dbj|BAJ02307.1| electron transport complex protein rnfB [Shewanella violacea DSS12] Length = 189 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGAGKLMHTVITDYCTGCDLCVEPCPVDCI 159 Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+T+ C C CVE CPVDC Sbjct: 136 MHTVITDYCTGCDL--CVEPCPVDCI 159 >gi|224827263|ref|ZP_03700357.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] gi|224600552|gb|EEG06741.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Lutiella nitroferrum 2002] Length = 83 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M+ ++T+ CI C C CP + +GE I P+ C C C+ CPVD Sbjct: 1 MSLMITDECINCDV--CEPECPNNAISQGEEIYEIDPNLCTQCVGHYDEPQCQQVCPVDC 58 Query: 55 IKPD 58 I D Sbjct: 59 IPLD 62 Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 17/23 (73%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP +AI E Sbjct: 7 DECINCDVCEPECPNNAISQGEE 29 >gi|213620807|ref|ZP_03373590.1| putative oxidoreductase Fe-S binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 232 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C C+ C CP + + ++ +CI C C CP Sbjct: 56 CHHCEDAPCARSCPNGAIAHINDSVQVNAQKCIGCKSCVVACPFG 100 >gi|150401779|ref|YP_001325545.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014482|gb|ABR56933.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus aeolicus Nankai-3] Length = 502 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 9 CILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+LC CV+ CP D E F I+ D CI CG C CP +AI Sbjct: 338 CVLCG--ICVKECPEDAIEIKELPKFEVINDDNCIACGTCSTVCPNNAI 384 Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 15/73 (20%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECID-----CGVCEPECPVDAIKP 57 Y E+C+LC CV++CP N + I+ + CID CG+C ECP DAI+ Sbjct: 306 YYNPEDCLLCNV--CVKICP--------NEVRINKETCIDGGCVLCGICVKECPEDAIEI 355 Query: 58 DTEPGLELWLKIN 70 P E+ N Sbjct: 356 KELPKFEVINDDN 368 Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Query: 7 ENCILCKH---TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + C C + C+ VCP + +N CI CG+C CP +AIK Sbjct: 13 DKCKKCSFEQESKCMNVCPTNAIKLIDNKAF----SCITCGMCAKNCPNNAIK 61 Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 CI C C + CP + + + +P++C+ C VC CP + Sbjct: 283 CINCGL--CADKCPNNALKLVDGKIYYNPEDCLLCNVCVKICPNE 325 Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E C C C+ +CP + E E D C C +C+ CPVDAI Sbjct: 194 AEKCRDCG--KCIFLCPKNTILEKEEV-----DGCTGCNICKDYCPVDAI 236 Score = 37.1 bits (85), Expect = 0.86, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE-NFLAIHPDECIDCGVCEPECPV 52 +CI C C + CP + + E + C CG CE CPV Sbjct: 44 SCITCG--MCAKNCPNNAIKKNEFGGYYVDRVRCNGCGTCEKVCPV 87 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C+ C C ++CP EG+ I+ ++C C C CP AI Sbjct: 448 CVFCGL--CNKICPQQAIDEGK----INLNDCEYCSACVNICPAHAI 488 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 + C C C + CPVD +G ++ ++CI C C +CP DA+K + Sbjct: 219 DGCTGCN--ICKDYCPVDAIDKGA----VNYNKCILCNNCIIKCPKDALKIE 264 >gi|117621436|ref|YP_857087.1| anaerobic sulfite reductase subunit C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562843|gb|ABK39791.1| anaerobic sulfite reductase subunit C [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 336 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Query: 3 YVVTENCILCKHTDCVEVCP---VDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 + E CI C CV+ C VDC +CI CG C CP A Sbjct: 174 HFNAERCIGCG--ACVKACSHHAVDCLAIKHGKAVKEESKCIGCGECVLACPTLA--WQR 229 Query: 60 EPGLELWLKINSEYATQWP 78 +P +K+ + + P Sbjct: 230 DPKQLYMVKLGGRTSKKTP 248 Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 8/46 (17%) Query: 18 VEVCPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 + CP DC G + + + CI CG C C A+ Sbjct: 150 IAGCPNDCAKANMADFGILGIAKIHFNAERCIGCGACVKACSHHAV 195 >gi|70607958|ref|YP_256828.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus acidocaldarius DSM 639] gi|68568606|gb|AAY81535.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Sulfolobus acidocaldarius DSM 639] Length = 336 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 18 VEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 + VCP + + E + I D CI CG C CP +A+K Sbjct: 1 MNVCPANAITKNEMGIVRIIEDNCIGCGFCTWACPYEALK 40 Score = 41.7 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 13/59 (22%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDEC------IDCG--VCEPECPVDA 54 ++ +NCI C C CP + + + +C I G C CP A Sbjct: 19 IIEDNCIGCGF--CTWACPYEALKITPSGIM---SKCHLCYNRIGSGLPYCVEACPTGA 72 >gi|15831591|ref|NP_310364.1| electron transport complex protein RnfB [Escherichia coli O157:H7 str. Sakai] gi|74312045|ref|YP_310464.1| electron transport complex protein RnfB [Shigella sonnei Ss046] gi|91210841|ref|YP_540827.1| electron transport complex protein RnfB [Escherichia coli UTI89] gi|117623814|ref|YP_852727.1| electron transport complex protein RnfB [Escherichia coli APEC O1] gi|157157455|ref|YP_001462917.1| electron transport complex protein RnfB [Escherichia coli E24377A] gi|168750558|ref|ZP_02775580.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4113] gi|168757456|ref|ZP_02782463.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4401] gi|168763668|ref|ZP_02788675.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4501] gi|168771170|ref|ZP_02796177.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4486] gi|168775858|ref|ZP_02800865.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4196] gi|168783451|ref|ZP_02808458.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4076] gi|168789465|ref|ZP_02814472.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC869] gi|168800888|ref|ZP_02825895.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC508] gi|170682878|ref|YP_001743626.1| electron transport complex protein RnfB [Escherichia coli SMS-3-5] gi|191165916|ref|ZP_03027753.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli B7A] gi|191173438|ref|ZP_03034966.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli F11] gi|193064973|ref|ZP_03046049.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E22] gi|194425888|ref|ZP_03058444.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli B171] gi|195939017|ref|ZP_03084399.1| electron transport complex protein RnfB [Escherichia coli O157:H7 str. EC4024] gi|208810550|ref|ZP_03252426.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208816778|ref|ZP_03257898.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208820538|ref|ZP_03260858.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209397589|ref|YP_002270698.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209918941|ref|YP_002293025.1| electron transport complex protein RnfB [Escherichia coli SE11] gi|217328786|ref|ZP_03444867.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218558499|ref|YP_002391412.1| electron transport complex protein RnfB [Escherichia coli S88] gi|218695191|ref|YP_002402858.1| electron transport complex protein RnfB [Escherichia coli 55989] gi|218699804|ref|YP_002407433.1| electron transport complex protein RnfB [Escherichia coli IAI39] gi|237705571|ref|ZP_04536052.1| electron transport complex protein rnfB [Escherichia sp. 3_2_53FAA] gi|254793245|ref|YP_003078082.1| electron transport complex protein RnfB [Escherichia coli O157:H7 str. TW14359] gi|260843934|ref|YP_003221712.1| putative iron-sulfur protein [Escherichia coli O103:H2 str. 12009] gi|261227927|ref|ZP_05942208.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli O157:H7 str. FRIK2000] gi|261258338|ref|ZP_05950871.1| putative iron-sulfur protein [Escherichia coli O157:H7 str. FRIK966] gi|291282760|ref|YP_003499578.1| Electron transport complex protein rnfB [Escherichia coli O55:H7 str. CB9615] gi|293414945|ref|ZP_06657588.1| electron transport complex protein rnfB [Escherichia coli B185] gi|293446003|ref|ZP_06662425.1| electron transport complex protein RnfB [Escherichia coli B088] gi|300821501|ref|ZP_07101648.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 119-7] gi|300907219|ref|ZP_07124881.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 84-1] gi|300927477|ref|ZP_07143190.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 182-1] gi|300990136|ref|ZP_07179143.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 200-1] gi|301303140|ref|ZP_07209266.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 124-1] gi|301329556|ref|ZP_07222339.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 78-1] gi|306813408|ref|ZP_07447598.1| electron transport complex protein RnfB [Escherichia coli NC101] gi|309793393|ref|ZP_07687820.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 145-7] gi|331653023|ref|ZP_08354028.1| electron transport complex protein RnfB [Escherichia coli M718] gi|331657597|ref|ZP_08358559.1| electron transport complex protein RnfB [Escherichia coli TA206] gi|331668305|ref|ZP_08369153.1| electron transport complex protein RnfB [Escherichia coli TA271] gi|331673197|ref|ZP_08373965.1| electron transport complex protein RnfB [Escherichia coli TA280] gi|331677493|ref|ZP_08378168.1| electron transport complex protein RnfB [Escherichia coli H591] gi|331683135|ref|ZP_08383736.1| electron transport complex protein RnfB [Escherichia coli H299] gi|17368140|sp|P58323|RNFB_ECO57 RecName: Full=Electron transport complex protein rnfB gi|123266074|sp|Q1RBG8|RNFB_ECOUT RecName: Full=Electron transport complex protein rnfB gi|123759604|sp|Q3Z1Y3|RNFB_SHISS RecName: Full=Electron transport complex protein rnfB gi|166225082|sp|A1ABH3|RNFB_ECOK1 RecName: Full=Electron transport complex protein rnfB gi|166991041|sp|A7ZM88|RNFB_ECO24 RecName: Full=Electron transport complex protein rnfB gi|226735411|sp|B7M9Y2|RNFB_ECO45 RecName: Full=Electron transport complex protein rnfB gi|226735412|sp|B5Z462|RNFB_ECO5E RecName: Full=Electron transport complex protein rnfB gi|226735413|sp|B7NU05|RNFB_ECO7I RecName: Full=Electron transport complex protein rnfB gi|226735417|sp|B6IB63|RNFB_ECOSE RecName: Full=Electron transport complex protein rnfB gi|226735418|sp|B1LEQ8|RNFB_ECOSM RecName: Full=Electron transport complex protein rnfB gi|254807924|sp|B7L5I1|RNFB_ECO55 RecName: Full=Electron transport complex protein rnfB gi|13361804|dbj|BAB35760.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|73855522|gb|AAZ88229.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91072415|gb|ABE07296.1| electron transport complex protein RnfB [Escherichia coli UTI89] gi|115512938|gb|ABJ01013.1| electron transport complex protein RnfB [Escherichia coli APEC O1] gi|157079485|gb|ABV19193.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E24377A] gi|170520596|gb|ACB18774.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli SMS-3-5] gi|187768706|gb|EDU32550.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4196] gi|188015258|gb|EDU53380.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4113] gi|188999203|gb|EDU68189.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4076] gi|189355528|gb|EDU73947.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4401] gi|189359994|gb|EDU78413.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4486] gi|189366182|gb|EDU84598.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4501] gi|189370933|gb|EDU89349.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC869] gi|189376873|gb|EDU95289.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC508] gi|190904047|gb|EDV63759.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli B7A] gi|190906280|gb|EDV65891.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli F11] gi|192927460|gb|EDV82078.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E22] gi|194415943|gb|EDX32209.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli B171] gi|208725066|gb|EDZ74773.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4206] gi|208731121|gb|EDZ79810.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4045] gi|208740661|gb|EDZ88343.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4042] gi|209158989|gb|ACI36422.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. EC4115] gi|209769658|gb|ACI83141.1| hypothetical protein ECs2337 [Escherichia coli] gi|209769660|gb|ACI83142.1| hypothetical protein ECs2337 [Escherichia coli] gi|209769662|gb|ACI83143.1| hypothetical protein ECs2337 [Escherichia coli] gi|209769664|gb|ACI83144.1| hypothetical protein ECs2337 [Escherichia coli] gi|209769666|gb|ACI83145.1| hypothetical protein ECs2337 [Escherichia coli] gi|209912200|dbj|BAG77274.1| conserved hypothetical protein [Escherichia coli SE11] gi|217318133|gb|EEC26560.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli O157:H7 str. TW14588] gi|218351923|emb|CAU97648.1| putative iron-sulfur protein [Escherichia coli 55989] gi|218365268|emb|CAR02989.1| putative iron-sulfur protein [Escherichia coli S88] gi|218369790|emb|CAR17561.1| putative iron-sulfur protein [Escherichia coli IAI39] gi|222033387|emb|CAP76128.1| electron transport complex protein rnfB [Escherichia coli LF82] gi|226900328|gb|EEH86587.1| electron transport complex protein rnfB [Escherichia sp. 3_2_53FAA] gi|254592645|gb|ACT72006.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli O157:H7 str. TW14359] gi|257759081|dbj|BAI30578.1| predicted iron-sulfur protein [Escherichia coli O103:H2 str. 12009] gi|284921552|emb|CBG34624.1| electron transport complex protein [Escherichia coli 042] gi|290762633|gb|ADD56594.1| Electron transport complex protein rnfB [Escherichia coli O55:H7 str. CB9615] gi|291322833|gb|EFE62261.1| electron transport complex protein RnfB [Escherichia coli B088] gi|291432593|gb|EFF05572.1| electron transport complex protein rnfB [Escherichia coli B185] gi|294492581|gb|ADE91337.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli IHE3034] gi|300305771|gb|EFJ60291.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 200-1] gi|300401023|gb|EFJ84561.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 84-1] gi|300416581|gb|EFJ99891.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 182-1] gi|300526004|gb|EFK47073.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 119-7] gi|300841549|gb|EFK69309.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 124-1] gi|300844325|gb|EFK72085.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 78-1] gi|305853153|gb|EFM53593.1| electron transport complex protein RnfB [Escherichia coli NC101] gi|307626886|gb|ADN71190.1| electron transport complex protein RnfB [Escherichia coli UM146] gi|308122980|gb|EFO60242.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 145-7] gi|312946228|gb|ADR27055.1| electron transport complex protein RnfB [Escherichia coli O83:H1 str. NRG 857C] gi|315257572|gb|EFU37540.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 85-1] gi|315286323|gb|EFU45759.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 110-3] gi|315297364|gb|EFU56644.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 16-3] gi|320174165|gb|EFW49330.1| Electron transport complex protein RnfB [Shigella dysenteriae CDC 74-1112] gi|320186300|gb|EFW61036.1| Electron transport complex protein RnfB [Shigella flexneri CDC 796-83] gi|320188314|gb|EFW62976.1| Electron transport complex protein RnfB [Escherichia coli O157:H7 str. EC1212] gi|320195474|gb|EFW70099.1| Electron transport complex protein RnfB [Escherichia coli WV_060327] gi|320197811|gb|EFW72419.1| Electron transport complex protein RnfB [Escherichia coli EC4100B] gi|320647299|gb|EFX16107.1| electron transport complex protein RnfB [Escherichia coli O157:H- str. 493-89] gi|320652593|gb|EFX20862.1| electron transport complex protein RnfB [Escherichia coli O157:H- str. H 2687] gi|320653113|gb|EFX21307.1| electron transport complex protein RnfB [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|323163523|gb|EFZ49349.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E128010] gi|323169934|gb|EFZ55590.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli LT-68] gi|323187053|gb|EFZ72369.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli RN587/1] gi|323948000|gb|EGB43993.1| electron transporter [Escherichia coli H120] gi|323952613|gb|EGB48485.1| electron transporter [Escherichia coli H252] gi|323956693|gb|EGB52429.1| electron transporter [Escherichia coli H263] gi|324006985|gb|EGB76204.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 57-2] gi|324014760|gb|EGB83979.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 60-1] gi|324019500|gb|EGB88719.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 117-3] gi|324119384|gb|EGC13271.1| electron transporter [Escherichia coli E1167] gi|326341994|gb|EGD65775.1| Electron transport complex protein RnfB [Escherichia coli O157:H7 str. 1044] gi|326343545|gb|EGD67307.1| Electron transport complex protein RnfB [Escherichia coli O157:H7 str. 1125] gi|331049121|gb|EGI21193.1| electron transport complex protein RnfB [Escherichia coli M718] gi|331055845|gb|EGI27854.1| electron transport complex protein RnfB [Escherichia coli TA206] gi|331063499|gb|EGI35410.1| electron transport complex protein RnfB [Escherichia coli TA271] gi|331069395|gb|EGI40782.1| electron transport complex protein RnfB [Escherichia coli TA280] gi|331073953|gb|EGI45273.1| electron transport complex protein RnfB [Escherichia coli H591] gi|331079350|gb|EGI50547.1| electron transport complex protein RnfB [Escherichia coli H299] gi|332096075|gb|EGJ01080.1| electron transport complex, RnfABCDGE type, B subunit [Shigella boydii 3594-74] gi|333005284|gb|EGK24804.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri VA-6] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|333005860|gb|EGK25376.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri K-272] gi|333018896|gb|EGK38189.1| electron transport complex, RnfABCDGE type, B subunit [Shigella flexneri K-227] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVISDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|325088907|gb|EGC42217.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88] Length = 225 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAICPALAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 181 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 182 ESP----------NAEYATETREELLYNKEKLLANGDKWE 211 >gi|323693792|ref|ZP_08107987.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] gi|323502178|gb|EGB18045.1| 4Fe-4S ferredoxin [Clostridium symbiosum WAL-14673] Length = 274 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E+C C CVE CP+ + P CI C C +CP +A D Sbjct: 202 EDCDSCG--ICVEACPMGSISREDPKEV--PGICIKCQACVKKCPTNAKYFDDPA 252 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPG 62 P++C CG+C CP+ +I + Sbjct: 201 PEDCDSCGICVEACPMGSISREDPKE 226 >gi|295103696|emb|CBL01240.1| Uncharacterized Fe-S center protein [Faecalibacterium prausnitzii SL3/3] Length = 374 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C C + C D Y EN I D+C CG C C DAI + EL Sbjct: 197 CRGC--HRCAKECGSDAITYNAENKAVIDYDKCKGCGRCIGACSFDAIYSPNDCANELLD 254 Query: 68 KINSEYAT 75 + +EYA Sbjct: 255 RKMAEYAA 262 >gi|296100564|ref|YP_003610710.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055023|gb|ADF59761.1| putative hydrogenase, 4Fe-4S ferredoxin-type component [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 151 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 18/53 (33%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C+ C VCP GE + CI C C CP A Sbjct: 46 AFTTAVGCHQCEDAPCANVCPTQAIRRGEGAWQVEQARCIGCKRCMVACPFGA 98 >gi|269963060|ref|ZP_06177396.1| iron-sulfur cluster-binding protein [Vibrio harveyi 1DA3] gi|269832192|gb|EEZ86315.1| iron-sulfur cluster-binding protein [Vibrio harveyi 1DA3] Length = 553 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPEDTQKFIE 247 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + L +CI CG+CE CP Sbjct: 419 DCTLC--MSCVAVCPTRALHTDGESPSLKFVEQDCIQCGLCEKACP 462 Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 F + D C C C CP A+ + ++IN Sbjct: 166 PKFFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDKTGHRIEIN 213 >gi|269791962|ref|YP_003316866.1| electron transport complex, RnfABCDGE type, B subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099597|gb|ACZ18584.1| electron transport complex, RnfABCDGE type, B subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 269 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C C +VCP +N I +C CG C +CP +I Sbjct: 218 CIGCGL--CSKVCPEGAITMEDNLPVIDQSKCTQCGKCVEKCPTKSI 262 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%) Query: 17 CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CV VCP D + + I + C+ CG+C CP I+ Sbjct: 150 CVAVCPFDAIHIENSLARIDENRCVGCGLCVASCPKGVIE 189 Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 18/70 (25%) Query: 9 CILCKHTDCVEVCPVDCF----------------YEGENFLAIHPDECIDCGVCEPECPV 52 C+ C CV CP + G + + CI CG+C CP Sbjct: 173 CVGCGL--CVASCPKGVIELVVQDKRVRVACNSHHRGLDVKNVCQLGCIGCGLCSKVCPE 230 Query: 53 DAIKPDTEPG 62 AI + Sbjct: 231 GAITMEDNLP 240 >gi|218133340|ref|ZP_03462144.1| hypothetical protein BACPEC_01205 [Bacteroides pectinophilus ATCC 43243] gi|217992213|gb|EEC58217.1| hypothetical protein BACPEC_01205 [Bacteroides pectinophilus ATCC 43243] Length = 293 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 V++ CI C C + C + + + +C +CG C CP DA Sbjct: 167 VSDKCINCGV--CEKACREQAITFTGSEIILDKSKCNNCGRCAKACPTDA 214 Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/18 (61%), Positives = 13/18 (72%) Query: 38 DECIDCGVCEPECPVDAI 55 D+CI+CGVCE C AI Sbjct: 169 DKCINCGVCEKACREQAI 186 >gi|253701687|ref|YP_003022876.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] gi|251776537|gb|ACT19118.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 97 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 E C+ C C+EVCP F EG+ + D C++CG C CP A+ D Sbjct: 18 ELCVGCG--RCIEVCPHQVFQLEGKRAIVADRDACMECGACALNCPAAALNVD 68 >gi|86748479|ref|YP_484975.1| NADH dehydrogenase subunit I [Rhodopseudomonas palustris HaA2] gi|115502508|sp|Q2J0E6|NUOI1_RHOP2 RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|86571507|gb|ABD06064.1| NADH-quinone oxidoreductase, chain I [Rhodopseudomonas palustris HaA2] Length = 171 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFYEG----------ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C VCPV C I+ CI CG CE CP AI+ Sbjct: 49 ERCVACNL--CAAVCPVGCIDLSKAVADDGRWYPEHFRINFARCIFCGFCEEACPTAAIQ 106 Query: 57 PDTEPGLELW 66 + L W Sbjct: 107 LTPDFELGEW 116 >gi|187733860|ref|YP_001880383.1| electron transport complex protein RnfB [Shigella boydii CDC 3083-94] gi|226735434|sp|B2U2C7|RNFB_SHIB3 RecName: Full=Electron transport complex protein rnfB gi|187430852|gb|ACD10126.1| electron transport complex, RnfABCDGE type, B subunit [Shigella boydii CDC 3083-94] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|330720452|gb|EGG98761.1| Electron transport complex protein RnfB [gamma proteobacterium IMCC2047] Length = 218 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 CI C T C++ CP+D + + DEC C +C CPVD I Sbjct: 113 ECIGC--TKCIQACPMDAILGAAKHMHTVIADECTGCDLCVEPCPVDCI 159 Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 14/27 (51%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G+ I ECI C C CP+DAI Sbjct: 103 GKRVALIREAECIGCTKCIQACPMDAI 129 Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCF 26 M V+ + C C CVE CPVDC Sbjct: 136 MHTVIADECTGCDL--CVEPCPVDCI 159 >gi|320195433|gb|EFW70058.1| NrfC-like protein [Escherichia coli WV_060327] gi|323187095|gb|EFZ72411.1| hypothetical protein ECRN5871_4682 [Escherichia coli RN587/1] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|297618250|ref|YP_003703409.1| NADH dehydrogenase (quinone) [Syntrophothermus lipocalidus DSM 12680] gi|297146087|gb|ADI02844.1| NADH dehydrogenase (quinone) [Syntrophothermus lipocalidus DSM 12680] Length = 605 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 1 MT--YVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIK 56 MT Y+ C C C + CP D E + I D CI CG C C A+K Sbjct: 547 MTEFYIDASLCTGCGL--CKKNCPADAISGEIKEVHVIDQDRCIKCGECINNCKFQAVK 603 Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Query: 21 CPVD-CFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 CP C E I C CG+C+ CP DAI + + Sbjct: 539 CPAGVCRSMTE--FYIDASLCTGCGLCKKNCPADAISGEIKE 578 >gi|261339613|ref|ZP_05967471.1| electron transport complex, RnfABCDGE type, B subunit [Enterobacter cancerogenus ATCC 35316] gi|288318435|gb|EFC57373.1| electron transport complex, RnfABCDGE type, B subunit [Enterobacter cancerogenus ATCC 35316] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 4 VVTE-NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 V+ E NCI C T C++ CPVD + + D C C +C CP I+ Sbjct: 111 VIDEANCIGC--TKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQCIE 163 >gi|261346150|ref|ZP_05973794.1| NADH-quinone oxidoreductase subunit I [Providencia rustigianii DSM 4541] gi|282565803|gb|EFB71338.1| NADH-quinone oxidoreductase subunit I [Providencia rustigianii DSM 4541] Length = 180 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHEDGRWYPEFFRVNFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + W Sbjct: 116 LTPDFEMADW 125 >gi|212223421|ref|YP_002306657.1| Formate hydrogen lyase subunit 6 [Thermococcus onnurineus NA1] gi|212008378|gb|ACJ15760.1| Formate hydrogen lyase subunit 6 [Thermococcus onnurineus NA1] Length = 205 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 8/52 (15%) Query: 9 CILCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CI C CV CP D F G + + CI C C CP A Sbjct: 52 CIGCG--ACVRACPPDALTIEWDFENGRKRIVFNAARCIRCHRCVEVCPTGA 101 Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Query: 35 IHPDECIDCGVCEPECPVDA--IKPDTEPGLELWLKINSE 72 I P CI CG C CP DA I+ D E G + N+ Sbjct: 47 IDPHLCIGCGACVRACPPDALTIEWDFENG-RKRIVFNAA 85 >gi|191173453|ref|ZP_03034981.1| iron-sulfur cluster-binding protein [Escherichia coli F11] gi|190906295|gb|EDV65906.1| iron-sulfur cluster-binding protein [Escherichia coli F11] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|223937675|ref|ZP_03629577.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [bacterium Ellin514] gi|223893647|gb|EEF60106.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [bacterium Ellin514] Length = 546 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-NFLAIH-PDECIDCGVCEPECPVDAIKP 57 VT C C C+ CPV + + + H D+CI C C +CP + K Sbjct: 110 TVTTACHHCVDPGCLSGCPVLAYDKDPVTGIVRHLDDQCIGCQYCIMKCPYEVPKY 165 >gi|153812806|ref|ZP_01965474.1| hypothetical protein RUMOBE_03213 [Ruminococcus obeum ATCC 29174] gi|149831166|gb|EDM86255.1| hypothetical protein RUMOBE_03213 [Ruminococcus obeum ATCC 29174] Length = 623 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEG-ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 ++ E CI C C + CP ++ I+ D CI CG C+ C DA+ + Sbjct: 568 HINPEFCIGCG--KCAKNCPAGAISGKIKSPYHINNDVCIKCGSCKDNCNFDAVYVE 622 Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 7/46 (15%) Query: 11 LCKHTDC-VEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 K C +VC I+P+ CI CG C CP AI Sbjct: 550 HIKDKKCRAKVC------TALRKFHINPEFCIGCGKCAKNCPAGAI 589 >gi|194336021|ref|YP_002017815.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308498|gb|ACF43198.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 188 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 +E C C + CV CP + EN I+ C C C CP DA Sbjct: 58 SERCQHCDNAPCVTYCPTGASHYDENGTVQINRSRCTGCKACMAACPYDA 107 >gi|119355979|ref|YP_910623.1| sulfite reductase, dissimilatory-type beta subunit [Chlorobium phaeobacteroides DSM 266] gi|119353328|gb|ABL64199.1| dissimilatory sulfite reductase beta subunit [Chlorobium phaeobacteroides DSM 266] Length = 359 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Query: 12 CKHTDCVEVCPVDCFYE----GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ V CPV G+ L + ++CI CG C CP I +W+ Sbjct: 205 CELPKAVARCPVAAIRPTVVNGKRSLMVDEEKCICCGACFGACPAMEINHPEHSKFAIWV 264 >gi|320181353|gb|EFW56272.1| Electron transport complex protein RnfB [Shigella boydii ATCC 9905] Length = 192 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|317059515|ref|ZP_07924000.1| electron transport complex [Fusobacterium sp. 3_1_5R] gi|313685191|gb|EFS22026.1| electron transport complex [Fusobacterium sp. 3_1_5R] Length = 316 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP N I P +C +C +C CP AI Sbjct: 221 ACIGCG--MCQRTCPFGAIEVSNNLAKIDPAKCKNCQLCVVVCPTKAIY 267 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPV E + ++ + CI CG+C CP I Sbjct: 149 GYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCVKACPKSVI 192 Score = 40.1 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPD---------ECIDCGVCE 47 V E CI C CV+ CP ++ CI CG+C+ Sbjct: 172 VDEEACISCGL--CVKACPKSVIAMTPVAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQ 229 Query: 48 PECPVDAIK 56 CP AI+ Sbjct: 230 RTCPFGAIE 238 >gi|313148455|ref|ZP_07810648.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137222|gb|EFR54582.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 289 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C ++CPV +G+ L + CI C C CP A DT Sbjct: 222 CTHCG--ACAKMCPVSAIIKGDE-LNTDAERCIKCCACVKGCPQKARVYDTP 270 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 10/25 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 C CG C CPV AI E Sbjct: 218 DESLCTHCGACAKMCPVSAIIKGDE 242 >gi|297538948|ref|YP_003674717.1| NADH-quinone oxidoreductase subunit I [Methylotenera sp. 301] gi|297258295|gb|ADI30140.1| NADH-quinone oxidoreductase, chain I [Methylotenera sp. 301] Length = 163 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG+CE CPVD+I Sbjct: 62 ERCIACKL--CEAVCPAMAITIESEQREDNTRRTTRYDIDLTKCIFCGMCEESCPVDSI 118 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 62 ERCIACKLCEAVCPAMAITIESEQRED 88 >gi|258405023|ref|YP_003197765.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797250|gb|ACV68187.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfohalobium retbaense DSM 5692] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEG--ENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C CK+ C++ C + + + I PD+C C CP I+ D Sbjct: 65 PCQHCKNAPCIKACKEEAISKDVQTGIVRIDPDKCAGSRACLEACPYGVIQFD 117 >gi|255505769|ref|ZP_05348062.3| iron-sulfur cluster-binding protein [Bryantella formatexigens DSM 14469] gi|255265964|gb|EET59169.1| iron-sulfur cluster-binding protein [Bryantella formatexigens DSM 14469] Length = 325 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 10/50 (20%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIK 56 C+ C C VC +D HPD ECI CG C CPV AI Sbjct: 231 CVGC--QKCAHVCKMDVDP------VKHPDSAECIRCGECRDACPVQAIH 272 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 5/50 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-----HPDECIDCGVCEPECPVD 53 C+ C +CP+ Y N ++I +C+ C C C +D Sbjct: 195 CMSVYRFFCKAMCPLGAIYGLLNKISIYHLEVDEKKCVGCQKCAHVCKMD 244 >gi|242280644|ref|YP_002992773.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242123538|gb|ACS81234.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 263 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE--P 61 V + C LC C VCP G + PD+CI C C C +A K + Sbjct: 187 VSNDACQLCG--SCERVCPTAAISVGS-LVETDPDKCIFCCACVKVCAFEARKLEVPRLL 243 Query: 62 GLELWLKIN 70 + WL N Sbjct: 244 EVSQWLADN 252 >gi|253699754|ref|YP_003020943.1| hydrogenase 2 protein HybA [Geobacter sp. M21] gi|251774604|gb|ACT17185.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Geobacter sp. M21] Length = 309 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGE--NFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 +C+ C+ CV VCPV + + + + + CI C C+ CP + K E L Sbjct: 113 SCMHCQKPSCVSVCPVSAMTKEKVSGIVDYNKNTCIGCRYCQIACPYNIPKFQWEKALPQ 172 >gi|90579425|ref|ZP_01235235.1| FdxH [Vibrio angustum S14] gi|90440258|gb|EAS65439.1| FdxH [Vibrio angustum S14] Length = 291 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPV-DCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 +C+ C C++ CP D + EN + + ++C+ CG C CP D Sbjct: 99 SCMHCSDPGCLKACPEPDAIVQYENGVVDFNSEKCVGCGYCIAGCPFD 146 >gi|78044498|ref|YP_360900.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996613|gb|ABB15512.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 228 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEP 61 Y + C +C++ CV+VCPV Y + + + CI C C CP + + E Sbjct: 58 YFLPVACQMCENAPCVKVCPVGATYTDDKGRVLVDYERCIGCRYCMTACPYGVRQFNWED 117 Query: 62 G 62 Sbjct: 118 P 118 >gi|77164629|ref|YP_343154.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|254433116|ref|ZP_05046624.1| NADH-quinone oxidoreductase, chain I subfamily, putative [Nitrosococcus oceani AFC27] gi|110287763|sp|Q3JC22|NUOI1_NITOC RecName: Full=NADH-quinone oxidoreductase subunit I 1; AltName: Full=NADH dehydrogenase I subunit I 1; AltName: Full=NDH-1 subunit I 1 gi|76882943|gb|ABA57624.1| NADH dehydrogenase subunit I [Nitrosococcus oceani ATCC 19707] gi|207089449|gb|EDZ66720.1| NADH-quinone oxidoreductase, chain I subfamily, putative [Nitrosococcus oceani AFC27] Length = 180 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKTEDEQGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ 115 Query: 57 PDTEPGLELWLKIN 70 + + + + N Sbjct: 116 LTPDFEMGEYERPN 129 >gi|15606463|ref|NP_213843.1| DMSO reductase chain B [Aquifex aeolicus VF5] gi|2983679|gb|AAC07244.1| DMSO reductase chain B [Aquifex aeolicus VF5] Length = 254 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C+ C+ CV VCP Y E + + ++ D+CI C +C CP + D Sbjct: 72 SCLHCQDAPCVPVCPTGASYKREQDGIVLVNYDDCIGCKLCSWACPYGCREFDE 125 >gi|51894427|ref|YP_077118.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863] gi|51858116|dbj|BAD42274.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863] Length = 456 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPEC-PVDAIKPD 58 M ++ E C C C EVCPVD ++ + C+ CG C C +I D Sbjct: 1 MIFIDQELCTGC--RRCAEVCPVDAIVGEPGKPQSVDQEICVMCGQCVQVCSSYGSIWDD 58 Score = 40.1 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 16/38 (42%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKI 69 + I + C C C CPVDAI + + +I Sbjct: 1 MIFIDQELCTGCRRCAEVCPVDAIVGEPGKPQSVDQEI 38 >gi|262402197|ref|ZP_06078758.1| iron-sulfur cluster-binding protein [Vibrio sp. RC586] gi|297579085|ref|ZP_06941013.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC385] gi|262350979|gb|EEZ00112.1| iron-sulfur cluster-binding protein [Vibrio sp. RC586] gi|297536679|gb|EFH75512.1| iron-sulfur cluster-binding protein [Vibrio cholerae RC385] Length = 553 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 T +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 TSDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 11/29 (37%) Query: 42 DCGVCEPECPVDAIKPDTEPGLELWLKIN 70 C C CP A+ + ++IN Sbjct: 185 GCERCVDACPAGALSSEGSEQTGHRIQIN 213 >gi|71653204|ref|XP_815243.1| ribonuclease L inhibitor [Trypanosoma cruzi strain CL Brener] gi|70880285|gb|EAN93392.1| ribonuclease L inhibitor, putative [Trypanosoma cruzi] Length = 647 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 2 TYVVTENCILCK-HTDCVEVCPVD-----CFYEGENFLAIHP---DECIDCGVCEPECPV 52 V + C K +C + CPV+ C E + I + CI CG+C +CP Sbjct: 18 AVVNADRCKPSKCSLECSKCCPVNLQGKLCI-EVQKKSVISKISEELCIGCGLCVKKCPY 76 Query: 53 DAIK 56 AI+ Sbjct: 77 GAIQ 80 >gi|119384970|ref|YP_916026.1| NADH dehydrogenase subunit I [Paracoccus denitrificans PD1222] gi|156633536|sp|A1B486|NUOI_PARDP RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit 9; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NADH-quinone oxidoreductase subunit 9; Short=NQO9; AltName: Full=NDH-1 subunit 9; AltName: Full=NDH-1 subunit I gi|119374737|gb|ABL70330.1| NADH dehydrogenase subunit I [Paracoccus denitrificans PD1222] Length = 163 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 62 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 118 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 62 ERCIACKLCEAVCPAQAITIDAEPRED 88 >gi|332343389|gb|AEE56723.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|330999801|ref|ZP_08323506.1| Tat pathway signal sequence domain protein [Parasutterella excrementihominis YIT 11859] gi|329573804|gb|EGG55393.1| Tat pathway signal sequence domain protein [Parasutterella excrementihominis YIT 11859] Length = 231 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN--FLAIHPDECIDCGVCEPECPVDAIKPD 58 C C++ CV+ CPV Y+ + I D+CI C C C A KPD Sbjct: 88 CNHCENPTCVKACPVKATYKRPEDGIVVIDYDKCIHCMNCTKACAYGARKPD 139 >gi|323484838|ref|ZP_08090194.1| 4Fe-4S binding domain-containing protein [Clostridium symbiosum WAL-14163] gi|323401834|gb|EGA94176.1| 4Fe-4S binding domain-containing protein [Clostridium symbiosum WAL-14163] Length = 274 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E+C C CVE CP+ + P CI C C +CP +A D Sbjct: 202 EDCDSCG--ICVEACPMGSISREDPKEV--PGICIKCQACVKKCPTNAKYFDDPA 252 Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 37 PDECIDCGVCEPECPVDAIKPDTEPG 62 P++C CG+C CP+ +I + Sbjct: 201 PEDCDSCGICVEACPMGSISREDPKE 226 >gi|307195743|gb|EFN77575.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Harpegnathos saltator] Length = 152 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 51 ERCIACKL--CEAICPAQAITIEAEERIDGSRRTTRYDIDMSKCIYCGFCQEACPVDAI 107 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 38 DECIDCGVCEPECPVDAIKPDTEP 61 + CI C +CE CP AI + E Sbjct: 51 ERCIACKLCEAICPAQAITIEAEE 74 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 92 CIYCGF--CQEACPVDAIVEGPNF 113 >gi|296218966|ref|XP_002755672.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like [Callithrix jacchus] Length = 210 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAICPAQAITIEAEPRAD 135 Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|322417691|ref|YP_004196914.1| NADH-quinone oxidoreductase subunit I [Geobacter sp. M18] gi|320124078|gb|ADW11638.1| NADH-quinone oxidoreductase, chain I [Geobacter sp. M18] Length = 176 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 12/65 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E C+ C C CPVDC EGEN I+ CI CG+C CP AI Sbjct: 54 AERCVAC--YLCSGACPVDCISMAAAEGENGRRYAVWFRINFSRCILCGLCAEACPTLAI 111 Query: 56 KPDTE 60 + +E Sbjct: 112 QMSSE 116 >gi|253701406|ref|YP_003022595.1| NADH dehydrogenase (quinone) [Geobacter sp. M21] gi|251776256|gb|ACT18837.1| NADH dehydrogenase (quinone) [Geobacter sp. M21] Length = 636 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 5/50 (10%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPV--DAI 55 C C C+ CP G+ + I ++C CG C CP AI Sbjct: 569 CKGCG--SCLRKCPATAIEGGKKTIHVIDQEKCTKCGTCIEACPAAFGAI 616 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 33 LAIHPDECIDCGVCEPECPVDAIK 56 I P +C CG C +CP AI+ Sbjct: 562 FHIDPAKCKGCGSCLRKCPATAIE 585 >gi|217974489|ref|YP_002359240.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] gi|217499624|gb|ACK47817.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS223] Length = 490 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +C+ C CVEVCP ECI+CG C C +K D +P L ++ Sbjct: 289 DCVDCNL--CVEVCPTGIDIRNGLQY-----ECINCGACVDACNETMLKFDYKPNLIGYM 341 Query: 68 KIN 70 N Sbjct: 342 SEN 344 >gi|51246476|ref|YP_066360.1| glutamate synthase, beta subunit [Desulfotalea psychrophila LSv54] gi|50877513|emb|CAG37353.1| related to glutamate synthase, beta subunit [Desulfotalea psychrophila LSv54] Length = 775 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Query: 8 NCILCKHTD-CVEVCPVDCFYE-----GENFLAIHPDECIDCGVCEPECP 51 +C C+ C +CP GE + D+CI CG C CP Sbjct: 717 SCASCRDCHLCETICPEGAISREDLGNGEYRYVSNDDKCIACGFCADTCP 766 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 11/20 (55%) Query: 40 CIDCGVCEPECPVDAIKPDT 59 C DC +CE CP AI + Sbjct: 721 CRDCHLCETICPEGAISRED 740 >gi|118579705|ref|YP_900955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502415|gb|ABK98897.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pelobacter propionicus DSM 2379] Length = 264 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 3/68 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 CI C CV +CP G CI C C ECP A E E + Sbjct: 193 CIRCG--TCVRICPTAAISSGVGMPT-DLVACIACCACVRECPTGARVMRDERIREKAVW 249 Query: 69 INSEYATQ 76 +N + A + Sbjct: 250 LNEKCAER 257 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 22 PVDCFYEGENFLAIHPDE----CIDCGVCEPECPVDAI 55 P D Y L+I P+ CI CG C CP AI Sbjct: 171 PGDSPYREWKGLSIPPETDASLCIRCGTCVRICPTAAI 208 >gi|300114500|ref|YP_003761075.1| NADH-quinone oxidoreductase subunit I [Nitrosococcus watsonii C-113] gi|299540437|gb|ADJ28754.1| NADH-quinone oxidoreductase, chain I [Nitrosococcus watsonii C-113] Length = 180 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Query: 7 ENCILCKHTDCVEVCPVDCF-------YEG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPVDC +G F I+ CI CG CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVDCIALQKTEDEQGRWYPEFFRINFSRCIFCGFCEEACPTYAIQ 115 Query: 57 PDTEPGLELWLKIN 70 + + + + N Sbjct: 116 LTPDFEMGEYERPN 129 >gi|295107118|emb|CBL04661.1| Fe-S-cluster-containing hydrogenase components 1 [Gordonibacter pamelaeae 7-10-1-b] Length = 175 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 V C+ C+ C VCP Y G + + + CI C C CP Sbjct: 48 TVPLQCMHCEDAPCAAVCPTGAAYIGADGIVGVDEGRCIGCKYCMAACPYQ 98 >gi|265766041|ref|ZP_06094082.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253709|gb|EEZ25174.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 278 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C ++CPV +G+ L + CI C C CP A DT Sbjct: 211 CTHCG--ACAKMCPVSAIAKGDE-LNTDAERCIKCCACVKGCPQKARVYDTP 259 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 10/25 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 C CG C CPV AI E Sbjct: 207 DESLCTHCGACAKMCPVSAIAKGDE 231 >gi|254162798|ref|YP_003045906.1| putative oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli B str. REL606] gi|253974699|gb|ACT40370.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli B str. REL606] gi|253978865|gb|ACT44535.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli BL21(DE3)] Length = 110 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 3 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 57 >gi|226329125|ref|ZP_03804643.1| hypothetical protein PROPEN_03028 [Proteus penneri ATCC 35198] gi|225202311|gb|EEG84665.1| hypothetical protein PROPEN_03028 [Proteus penneri ATCC 35198] Length = 158 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVD 53 +C C+ C+ VCP E + + ++CI C C CP Sbjct: 26 SCQQCEDAPCIPVCPTGASWRDETNGIVRVDKEKCIGCSYCISACPYQ 73 >gi|157376475|ref|YP_001475075.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318849|gb|ABV37947.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella sediminis HAW-EB3] Length = 85 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++ ++CI C C CP GE I PD C +C C CP+D Sbjct: 1 MALIIDDSCINCD--MCEPECPNQAITMGEEIYEIDPDLCTECVGHYDKPTCISVCPIDC 58 Query: 55 IKPD 58 I PD Sbjct: 59 IDPD 62 >gi|152999560|ref|YP_001365241.1| cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella baltica OS185] gi|151364178|gb|ABS07178.1| Cytochrome c oxidase cbb3 type accessory protein FixG [Shewanella baltica OS185] Length = 490 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +C+ C CVEVCP ECI+CG C C +K D +P L ++ Sbjct: 289 DCVDCNL--CVEVCPTGIDIRNGLQY-----ECINCGACVDACNETMLKFDYKPNLIGYM 341 Query: 68 KIN 70 N Sbjct: 342 SEN 344 >gi|147921293|ref|YP_684893.1| NADPH-dependent glutamate synthase large subunit [uncultured methanogenic archaeon RC-I] gi|110620289|emb|CAJ35567.1| NADPH-dependent glutamate synthase, large subunit domain 2 [uncultured methanogenic archaeon RC-I] Length = 503 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPD--ECIDCGVCEPECPVDAIKPDTEPGLELW 66 C CK CV+ C + + + I D +C+ C C CP AI+ + + Sbjct: 18 CARCK--RCVDECGFEALTYSKEYHEIIADDAKCVACHRCATMCPKHAIRIEDNALAYKY 75 Query: 67 LKINSEYATQW 77 N+ ++ Q Sbjct: 76 ---NANFSAQH 83 >gi|148262556|ref|YP_001229262.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146396056|gb|ABQ24689.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 252 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 18/102 (17%) Query: 8 NCILCKHTDCVEVCPVDCFYE---------GENFLAIHPDECIDCGVCEPECPVDAIKPD 58 C+ C CV CPV G + ++ CI CG C P CP A D Sbjct: 79 PCMQCDKPPCVTACPVKGPDGATWKETKGIGTGIVPVNYARCIGCGKCVPACPYQARTMD 138 Query: 59 T-------EPGLELWLKINS-EYATQWPNITTKKESLPSAAK 92 P L+ + + S EY +WP + K + + +A K Sbjct: 139 DGGFHTAGTPELQKYETLPSFEYGKKWPR-SGKNQPIGNARK 179 >gi|191169559|ref|ZP_03031284.1| iron-sulfur cluster-binding protein [Escherichia coli B7A] gi|190900395|gb|EDV60219.1| iron-sulfur cluster-binding protein [Escherichia coli B7A] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|332527354|ref|ZP_08403410.1| 4Fe-4S ferredoxin [Rubrivivax benzoatilyticus JA2] gi|332111763|gb|EGJ11743.1| 4Fe-4S ferredoxin [Rubrivivax benzoatilyticus JA2] Length = 85 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 8/61 (13%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M +T+ CI C C CP G+ I P C +C C CPV+ Sbjct: 1 MALWITDECINCDV--CEPECPNQAISMGDERYEIDPRRCTECVGHFDEPQCVQVCPVEC 58 Query: 55 I 55 I Sbjct: 59 I 59 Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 7 DECINCDVCEPECPNQAISMGDE 29 >gi|325960237|ref|YP_004291703.1| NADH dehydrogenase (quinone) [Methanobacterium sp. AL-21] gi|325331669|gb|ADZ10731.1| NADH dehydrogenase (quinone) [Methanobacterium sp. AL-21] Length = 619 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPEC--PVDAIK 56 VV E C C C++ CPV + + I ++CI CG C C +AI+ Sbjct: 561 VVDEKCEGC--MLCLKSCPVGAVSGTKKHIHSIDTEKCIKCGTCIELCSGKYNAIE 614 >gi|312966566|ref|ZP_07780786.1| uncharacterized ferredoxin-like protein ydhX [Escherichia coli 2362-75] gi|312288676|gb|EFR16576.1| uncharacterized ferredoxin-like protein ydhX [Escherichia coli 2362-75] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|312131902|ref|YP_003999242.1| NADH dehydrogenase subunit i [Leadbetterella byssophila DSM 17132] gi|311908448|gb|ADQ18889.1| NADH dehydrogenase subunit I [Leadbetterella byssophila DSM 17132] Length = 183 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 19/67 (28%) Query: 7 ENCILCKHTDCVEVCPVDCFYE-------GENFLA----------IHPDECIDCGVCEPE 49 E C C C CP + GE L I+ CI CG+CE Sbjct: 71 ERCTACGL--CAVACPAEAISMVAAERVKGEEHLYREEKYAAAYEINMLRCIFCGLCEEA 128 Query: 50 CPVDAIK 56 CP AI Sbjct: 129 CPKQAIY 135 >gi|257064958|ref|YP_003144630.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] gi|256792611|gb|ACV23281.1| NADH:ubiquinone oxidoreductase chain I-like protein [Slackia heliotrinireducens DSM 20476] Length = 395 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Query: 7 ENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ ++ + C + C N L I P+ CI CG C CP A++ Sbjct: 24 QRCVAVRNRNASCMRCADACTSGAISIQNNELVISPERCIGCGTCATVCPTCALEAHRPN 83 Query: 62 GLEL 65 EL Sbjct: 84 DAEL 87 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 + I PD CI C +C CP AI+ + Sbjct: 288 HVVIDPDTCISCRMCATFCPTGAIQKFDDED 318 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 9/59 (15%) Query: 3 YVVTEN--CILCKHTDCVEVCPVDCFY---EGENFLAIH--PDECIDCGVCEPECPVDA 54 +VV + CI C C CP + + + I P +C+ C CE CP +A Sbjct: 288 HVVIDPDTCISC--RMCATFCPTGAIQKFDDEDGTIGIDHYPGDCVRCRCCEDICPSNA 344 >gi|154278457|ref|XP_001540042.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150413627|gb|EDN09010.1| NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 225 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAICPALAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 181 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 182 ESP----------NAEYATETREELLYNKEKLLANGDKWE 211 >gi|146309813|ref|YP_001174887.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Enterobacter sp. 638] gi|145316689|gb|ABP58836.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Enterobacter sp. 638] Length = 153 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 20/53 (37%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 T+ C C+ C VCP + +A+ CI C C CP A Sbjct: 51 TFSTAVTCHHCEDAPCGNVCPTGAIRREQGRIAVDQQRCIGCKSCVIACPFGA 103 >gi|45359069|ref|NP_988626.1| pyruvate oxidoreductase (synthase) subunit delta [Methanococcus maripaludis S2] gi|45047944|emb|CAF31062.1| pyruvate oxidoreductase (synthase) subunit delta [Methanococcus maripaludis S2] Length = 85 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ C+ +C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCE--NCYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKAEREE 84 >gi|332289766|ref|YP_004420618.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] gi|330432662|gb|AEC17721.1| hydrogenase 2 protein HybA [Gallibacterium anatis UMN179] Length = 224 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C + CV VCP F + + + ++ D C+ C C CP Sbjct: 92 SCQHCSNAPCVHVCPTGASFIDAKTGIVDVNKDLCVGCQYCIAVCPY 138 >gi|321250193|ref|XP_003191722.1| iron-sulfur protein required for ribosome biogenesis and translation initiation; Rli1p [Cryptococcus gattii WM276] gi|317458189|gb|ADV19935.1| Iron-sulfur protein required for ribosome biogenesis and translation initiation, putative; Rli1p [Cryptococcus gattii WM276] Length = 603 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 13/64 (20%) Query: 4 VVTENCILCKHTDCVEVCPVDC-----------FYEGENFLAIHPDECIDCGVCEPECPV 52 +++++ CK C + C C + I + CI CG+C +CP Sbjct: 10 IISDD--KCKPKRCRQECKRSCPVVKMGKLCIEVNPSDKKAFISEELCIGCGICVKKCPF 67 Query: 53 DAIK 56 +AI+ Sbjct: 68 EAIQ 71 >gi|319638825|ref|ZP_07993583.1| NADH-quinone oxidoreductase subunit I [Neisseria mucosa C102] gi|317399729|gb|EFV80392.1| NADH-quinone oxidoreductase subunit I [Neisseria mucosa C102] Length = 159 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----EGENF------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP E E+ I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEERED 84 >gi|262190854|ref|ZP_06049074.1| iron-sulfur cluster-binding protein [Vibrio cholerae CT 5369-93] gi|262033273|gb|EEY51791.1| iron-sulfur cluster-binding protein [Vibrio cholerae CT 5369-93] Length = 553 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 6 TENC----ILCKHTD-CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAI 55 T+ C K + CV+ CP EG + + I+P C G C CP +AI Sbjct: 173 TDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAI 232 Query: 56 KP--DTEPGLELWLK 68 + +++ Sbjct: 233 HYALPNPTDTQKFIE 247 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECP 51 +C LC CV VCP + + L +C+ CG+C CP Sbjct: 417 ASDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACP 462 Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + D C C C CP A+ + ++IN Sbjct: 166 PKYFRLDTDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 213 >gi|256032576|pdb|3EUN|A Chain A, Crystal Structure Of The 2[4fe-4s] C57a Ferredoxin Variant From Allochromatium Vinosum Length = 82 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDAIKPD 58 +T+ CI C C CP +G+ I P C +C C CPVDAI D Sbjct: 4 ITDECINCDV--CEPECPNGAISQGDETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKD 61 Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 16/23 (69%) Query: 38 DECIDCGVCEPECPVDAIKPDTE 60 DECI+C VCEPECP AI E Sbjct: 6 DECINCDVCEPECPNGAISQGDE 28 >gi|256830113|ref|YP_003158841.1| response regulator receiver protein [Desulfomicrobium baculatum DSM 4028] gi|256579289|gb|ACU90425.1| response regulator receiver protein [Desulfomicrobium baculatum DSM 4028] Length = 1143 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 20/65 (30%) Query: 9 CILCKHTDCVEVCPVDCFYE------------------GENFLAIHPDECIDCGVCEPEC 50 C+ C C EVCPV E N + D CI C C C Sbjct: 117 CVSCG--KCSEVCPVKVPSEFNAGLTQRSAVYLPVPHAIPNHYVLDLDNCIRCWKCHEAC 174 Query: 51 PVDAI 55 P AI Sbjct: 175 PTGAI 179 Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDA 54 C LC CV CP I DE C CG C CP A Sbjct: 1075 CSLC--QACVAACPYGARTVDLENELILVDEMLCQGCGACAAVCPNSA 1120 Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 35 IHPDECIDCGVCEPECPV 52 + P +C+ CG C CPV Sbjct: 112 VDPHKCVSCGKCSEVCPV 129 >gi|225560616|gb|EEH08897.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR] Length = 225 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 24/100 (24%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGENF---------LAIHPDECIDCGVCEPECPVDAIK 56 E CI CK C +CP E E I +CI CG C+ CPVDAI Sbjct: 124 ERCIACKL--CEAICPALAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIV 181 Query: 57 PDTEPGLELWLKINSEYATQWPN--ITTKKESLPSAAKMD 94 N+EYAT+ + K++ L + K + Sbjct: 182 ESP----------NAEYATETREELLYNKEKLLANGDKWE 211 >gi|225028462|ref|ZP_03717654.1| hypothetical protein EUBHAL_02737 [Eubacterium hallii DSM 3353] gi|224954212|gb|EEG35421.1| hypothetical protein EUBHAL_02737 [Eubacterium hallii DSM 3353] Length = 263 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 E CI C C +VCPV E N I C+ CG C CP A EP Sbjct: 189 EYCIYC--MLCADVCPVKAISE-SNPKEIDSSICLRCGSCLRICPTQAKYFTEEP 240 >gi|160944294|ref|ZP_02091523.1| hypothetical protein FAEPRAM212_01805 [Faecalibacterium prausnitzii M21/2] gi|158444476|gb|EDP21480.1| hypothetical protein FAEPRAM212_01805 [Faecalibacterium prausnitzii M21/2] Length = 374 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Query: 9 CILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C C C + C D Y EN I D+C CG C C DAI + EL Sbjct: 197 CRGC--HRCAKECGSDAITYNAENKAVIDYDKCKGCGRCIGACSFDAIYSPNDCANELLD 254 Query: 68 KINSEYAT 75 + +EYA Sbjct: 255 RKMAEYAA 262 >gi|150402891|ref|YP_001330185.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|150033921|gb|ABR66034.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] Length = 395 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 VT++C+ C CV CPVD ++ I D+CI C VC CP +AI Sbjct: 128 VTKDCVACGV--CVPECPVDAISI-KDIAVIDTDKCIYCTVCSQTCPWNAIF 176 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 V E CI C+ CVE CP Y GE P C CG+C CPV+AI + E Sbjct: 194 VNEEECIGCE--KCVEACPGSMIEYNGEALGVKLPVACPACGLCVESCPVEAISLEVE 249 Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 12/68 (17%) Query: 8 NCILCKHTDCVEVCPVDCFYE----------GENFLAIHPDECIDCGVCEPECPVDAIKP 57 C C CVE CPV+ + L D+C CG C +CP AIK Sbjct: 228 ACPACGL--CVESCPVEAISLEVEYASAKPVTDEGLVWLEDKCAYCGPCALKCPTGAIKV 285 Query: 58 DTEPGLEL 65 GLEL Sbjct: 286 VNPKGLEL 293 Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 12/66 (18%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF----------LAIHPDECIDCGVCEPECPVDAI 55 T+ CI C T C + CP + + ++ +ECI C C CP I Sbjct: 157 TDKCIYC--TVCSQTCPWNAIFVAGKMPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMI 214 Query: 56 KPDTEP 61 + + E Sbjct: 215 EYNGEA 220 Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 8/48 (16%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C++C C + CP + CI C C CP A Sbjct: 9 DACLVCN--ACAKACPTEAIEIAPFK------TCIQCFSCANACPTGA 48 >gi|85708744|ref|ZP_01039810.1| NADH dehydrogenase subunit I [Erythrobacter sp. NAP1] gi|85690278|gb|EAQ30281.1| NADH dehydrogenase subunit I [Erythrobacter sp. NAP1] Length = 162 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIEAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 117 Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 61 ERCIACKLCEAVCPAQAITIEAEPRED 87 >gi|57168471|ref|ZP_00367605.1| ferredoxin [Campylobacter coli RM2228] gi|57020279|gb|EAL56953.1| ferredoxin [Campylobacter coli RM2228] Length = 94 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 14/65 (21%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY------EGENFLAIHPDECIDCG------VCEP 48 M +T++CI C C++ CPV EGE+ ++ D+C++C C Sbjct: 1 MAVKITDSCIACG--SCIDECPVSAIVDDANNPEGEDRYYVYADKCVECVGHNDQPACAS 58 Query: 49 ECPVD 53 CP D Sbjct: 59 ACPTD 63 Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 13/27 (48%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPD 58 D CI CG C ECPV AI D Sbjct: 1 MAVKITDSCIACGSCIDECPVSAIVDD 27 >gi|312135816|ref|YP_004003154.1| hypothetical protein Calow_1825 [Caldicellulosiruptor owensensis OL] gi|311775867|gb|ADQ05354.1| protein of unknown function DUF362 [Caldicellulosiruptor owensensis OL] Length = 375 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C +C CP + +CI C C CP AIK Sbjct: 318 CIGC--AECFNTCPAQAIEMKSRKAYVDLKKCIRCYCCHELCPAKAIK 363 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 10/23 (43%) Query: 34 AIHPDECIDCGVCEPECPVDAIK 56 + CI C C CP AI+ Sbjct: 312 VFDKNICIGCAECFNTCPAQAIE 334 >gi|300087560|ref|YP_003758082.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527293|gb|ADJ25761.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 265 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 1/45 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPV 52 C C CV VCPV + + + C+ C C CP Sbjct: 75 CFHCVDPVCVSVCPVAAMRKTPDGPVVWDEARCMGCRYCAQACPF 119 >gi|255502230|gb|ACU11595.1| HfsB [Thermoanaerobacterium saccharolyticum] Length = 572 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 NC C C+ CPV + I CI CG C CP +A Sbjct: 10 NCRNC--YKCIRYCPVKAIKVNDEQAEIIEYRCIACGRCLNICPQNA 54 >gi|218885428|ref|YP_002434749.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756382|gb|ACL07281.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 652 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Query: 9 CILCKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C C+ CP GE + C CG+C CP AI+ + Sbjct: 584 CVGCG--KCITTCPYGAIEWMELRGEMKARVIETVCQGCGICTVTCPQGAIQLQHFTDNQ 641 Query: 65 LWLKINS 71 + ++N+ Sbjct: 642 ILAEVNA 648 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 26/84 (30%) Query: 2 TYVVTENCILCKHTDCVEVCP----VDCFYE---------------GENFLAIHPDECID 42 TYV E C C C+E CP D F E I P C Sbjct: 235 TYVDWELCTGCGL--CMEKCPSRKSPDAFNEHVGVTTSINIPFPQAIPKKAIIDPTSCRQ 292 Query: 43 -----CGVCEPECPVDAIKPDTEP 61 CGVC CP AI+ D E Sbjct: 293 FVKGKCGVCAKVCPTGAIRYDMED 316 >gi|169795317|ref|YP_001713110.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii AYE] gi|215482850|ref|YP_002325053.1| Ferredoxin [Acinetobacter baumannii AB307-0294] gi|301346773|ref|ZP_07227514.1| Ferredoxin [Acinetobacter baumannii AB056] gi|301513211|ref|ZP_07238448.1| Ferredoxin [Acinetobacter baumannii AB058] gi|301595953|ref|ZP_07240961.1| Ferredoxin [Acinetobacter baumannii AB059] gi|332850427|ref|ZP_08432747.1| ferredoxin [Acinetobacter baumannii 6013150] gi|332871877|ref|ZP_08440289.1| ferredoxin [Acinetobacter baumannii 6013113] gi|169148244|emb|CAM86107.1| putative 4Fe-4S ferredoxin-type protein [Acinetobacter baumannii AYE] gi|213987405|gb|ACJ57704.1| Ferredoxin [Acinetobacter baumannii AB307-0294] gi|332730698|gb|EGJ62009.1| ferredoxin [Acinetobacter baumannii 6013150] gi|332731091|gb|EGJ62392.1| ferredoxin [Acinetobacter baumannii 6013113] Length = 87 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T +CI C C+ CP +EG I C +C C+ CP+D Sbjct: 1 MALLITSDCINCD--MCLPECPNTAIFEGSKVYEIDSSRCTECVGFYDAPTCKAVCPIDC 58 Query: 55 IKPD 58 IK D Sbjct: 59 IKQD 62 >gi|163751796|ref|ZP_02159013.1| electron transport complex protein RnfB [Shewanella benthica KT99] gi|161328360|gb|EDP99520.1| electron transport complex protein RnfB [Shewanella benthica KT99] Length = 189 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 Y+ + CI C T C++ CPVD + + D C C +C CPVD I Sbjct: 107 AYIREDECIGC--TKCIQACPVDAILGTGKLMHTVITDYCTGCDLCVEPCPVDCI 159 >gi|315917799|ref|ZP_07914039.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691674|gb|EFS28509.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 316 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP N I P +C +C +C CP AI Sbjct: 221 ACIGCG--MCQRTCPFGAIEVSNNLAKIDPAKCKNCQLCVVVCPTKAIY 267 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPV E + ++ + CI CG+C CP I Sbjct: 149 GYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCVKACPKSVI 192 Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPD---------ECIDCGVCE 47 V E CI C CV+ CP ++ CI CG+C+ Sbjct: 172 VDEEACISCGL--CVKACPKSVIAMTPVAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQ 229 Query: 48 PECPVDAIK 56 CP AI+ Sbjct: 230 RTCPFGAIE 238 >gi|291523681|emb|CBK81974.1| hypothetical protein CC1_34490 [Coprococcus catus GD/7] Length = 275 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 E C CK C EVCP+ EN + P CI C C +CP A D Sbjct: 202 EICTRCK--ICAEVCPMGSISR-ENVEEV-PGVCIKCHACVRKCPTGARFFDDP 251 >gi|257462471|ref|ZP_05626883.1| electron transport complex, RnfABCDGE type, B subunit [Fusobacterium sp. D12] gi|317060128|ref|ZP_07924613.1| electron transport complex protein [Fusobacterium sp. D12] gi|313685804|gb|EFS22639.1| electron transport complex protein [Fusobacterium sp. D12] Length = 325 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP N I P +C +C +C CP AI Sbjct: 217 ACIGCG--MCQRTCPFGAIEVSNNLAKIDPAKCKNCQLCVVVCPTKAIY 263 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPV E + ++ + CI CG+C CP I Sbjct: 145 GYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCVKACPKSVI 188 Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPD---------ECIDCGVCE 47 V E CI C CV+ CP ++ CI CG+C+ Sbjct: 168 VDEEACISCGL--CVKACPKSVIAMTPAAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQ 225 Query: 48 PECPVDAIK 56 CP AI+ Sbjct: 226 RTCPFGAIE 234 >gi|227831490|ref|YP_002833270.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] gi|227457938|gb|ACP36625.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus L.S.2.15] Length = 280 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 95 YNIPINCFHCVNAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 147 >gi|168241839|ref|ZP_02666771.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451496|ref|YP_002047695.1| hypothetical protein SeHA_C3989 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|198244915|ref|YP_002217626.1| hypothetical protein SeD_A4050 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354729|ref|YP_002228530.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858903|ref|YP_002245554.1| electron-transport protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194409800|gb|ACF70019.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197939431|gb|ACH76764.1| protein AegA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274510|emb|CAR39545.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205339015|gb|EDZ25779.1| protein AegA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|206710706|emb|CAR35067.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625412|gb|EGE31757.1| protein AegA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629869|gb|EGE36212.1| protein AegA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 157 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 17/46 (36%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTSSRCIGCKSCMLACPFGA 103 >gi|166033231|ref|ZP_02236060.1| hypothetical protein DORFOR_02956 [Dorea formicigenerans ATCC 27755] gi|166027588|gb|EDR46345.1| hypothetical protein DORFOR_02956 [Dorea formicigenerans ATCC 27755] Length = 291 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 ++CI C CV+ C + + I ++C +C C CP DA Sbjct: 167 DDCIQCGV--CVKACREGALRMEDGKIVIDREKCNNCARCVKSCPTDA 212 Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%) Query: 16 DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 +C++ D +G + + D+CI CGVC C A++ + Sbjct: 145 NCLKAEENDVGIKGGMTVECNHDDCIQCGVCVKACREGALRMED 188 >gi|195953290|ref|YP_002121580.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932902|gb|ACG57602.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 279 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPECPVD 53 + C C++ CV VCP + + + + C CG C CP D Sbjct: 104 QLCNHCENPPCVPVCPTGATYKRQDGIVVVDNTICWGCGYCVNACPYD 151 >gi|157375180|ref|YP_001473780.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sediminis HAW-EB3] gi|189043390|sp|A8FUX9|RNFB_SHESH RecName: Full=Electron transport complex protein rnfB gi|157317554|gb|ABV36652.1| electron transport complex, RnfABCDGE type, B subunit [Shewanella sediminis HAW-EB3] Length = 189 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYE-GENFLAIHPDECIDCGVCEPECPVDAI 55 Y+ E CI C T C++ CPVD G+ + D C C +C CPVD I Sbjct: 107 AYIREEECIGC--TKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCI 159 >gi|92114035|ref|YP_573963.1| 4Fe-4S ferredoxin, iron-sulfur binding [Chromohalobacter salexigens DSM 3043] gi|91797125|gb|ABE59264.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Chromohalobacter salexigens DSM 3043] Length = 552 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWL 67 T C++VCP D + + I P C G C CP AI+ T L+ ++ Sbjct: 194 TRCLDVCPADAISSVKQEIVIDPFRCHGAGSCTSACPTGAIRYALPTPERLDDYI 248 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIH--PDECIDCGVCEPECPVDAI 55 T+NC LC CV VCP A++ C+ CG+CE CP I Sbjct: 417 TDNCTLC--MACVAVCPTQALSSPGQSPALNFQESACVQCGLCETACPEQVI 466 Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 12/34 (35%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 I D C C C CP A+ + + + Sbjct: 415 IDTDNCTLCMACVAVCPTQALSSPGQSPALNFQE 448 >gi|332968226|gb|EGK07303.1| NADH-quinone oxidoreductase subunit I [Kingella kingae ATCC 23330] Length = 159 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CP DAI Sbjct: 58 ERCIACKL--CEAVCPAMAINIESEQREDGTRRTTRYDIDLTKCIFCGFCEEACPTDAI 114 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 58 ERCIACKLCEAVCPAMAINIESEQRED 84 >gi|331663148|ref|ZP_08364058.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA143] gi|331058947|gb|EGI30924.1| putative oxidoreductase Fe-S subunit [Escherichia coli TA143] Length = 184 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|315186845|gb|EFU20603.1| hypothetical protein SpithDRAFT_0758 [Spirochaeta thermophila DSM 6578] Length = 371 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V+ + C C + C VCPV C ++ CI C C CP +AI Sbjct: 306 VIADRCRRCGY--CARVCPVSCITM-DSLPRWDYSRCIYCYCCHENCPHEAI 354 Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 14/30 (46%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTEPGLE 64 + D C CG C CPV I D+ P + Sbjct: 306 VIADRCRRCGYCARVCPVSCITMDSLPRWD 335 >gi|302338428|ref|YP_003803634.1| electron transport complex, RnfABCDGE type subunit beta [Spirochaeta smaragdinae DSM 11293] gi|301635613|gb|ADK81040.1| electron transport complex, RnfABCDGE type, B subunit [Spirochaeta smaragdinae DSM 11293] Length = 277 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Query: 12 CKHT-----DCVEVCPVDCF-YEGENFLAIHPDECIDCGVCEPECPVD 53 CK+ C++VCPVD Y+ + + D CI CG C CP Sbjct: 140 CKYGCLGLGSCMKVCPVDAISYDSGGRVVVDKDACISCGNCIEACPTG 187 >gi|297538836|ref|YP_003674605.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] gi|297258183|gb|ADI30028.1| cytochrome c oxidase accessory protein CcoG [Methylotenera sp. 301] Length = 482 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C CV+VCPV ECI CG+C C K D GL + Sbjct: 266 DCIDCSF--CVQVCPVGIDIRDGLQY-----ECISCGLCIDACDSVMDKMDYPRGLIKFS 318 Query: 68 KINSE 72 +NS Sbjct: 319 TLNSA 323 >gi|209964542|ref|YP_002297457.1| NADH dehydrogenase subunit I [Rhodospirillum centenum SW] gi|226737410|sp|B6ISX3|NUOI_RHOCS RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|209958008|gb|ACI98644.1| NADH-quinone oxidoreductase chain I [Rhodospirillum centenum SW] Length = 162 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG+C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPALAITIEAEPREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 117 >gi|197335878|ref|YP_002156366.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio fischeri MJ11] gi|197317368|gb|ACH66815.1| cytochrome c nitrite reductase, Fe-S protein [Vibrio fischeri MJ11] Length = 228 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C C++ CV VCP Y E + +H ++C+ CG C CP Sbjct: 98 SCQHCENAPCVMVCPTGAAYKDETTGIVDVHNEKCVGCGYCLVACPYQ 145 >gi|158523142|ref|YP_001531012.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511968|gb|ABW68935.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfococcus oleovorans Hxd3] Length = 298 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C LC C VCP D ++ L C+ C +C CP +A+ +P Sbjct: 232 ACTLCG--ACEAVCPFDAIKITDDRLVYDIGACMGCELCVENCPDNALTLYNDPD 284 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 13/25 (52%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 P C CG CE CP DAIK + Sbjct: 229 DPAACTLCGACEAVCPFDAIKITDD 253 >gi|116619541|ref|YP_821697.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222703|gb|ABJ81412.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 251 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 31/98 (31%), Gaps = 15/98 (15%) Query: 4 VVTENCILCKHTDCVEVCPVDCF--YEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C C CV VCP + P+ C+ C C CP A + Sbjct: 72 FIPMLCQHCGDAPCVSVCPQQAIDVNPVTGIVEQMPERCLGCRYCMVACPYHARYFNW-- 129 Query: 62 GLELWLKINSEYATQWPNITTKKESLPSAAKMDGVKQK 99 + WP K + A +M GV +K Sbjct: 130 -----------WDPAWPPGMEKTLNPDVAPRMRGVVEK 156 >gi|34581178|ref|ZP_00142658.1| NADH dehydrogenase I chain I [Rickettsia sibirica 246] gi|28262563|gb|EAA26067.1| NADH dehydrogenase I chain I [Rickettsia sibirica 246] Length = 143 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCF-YEGENF---------LAIHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP E + I +CI CG+C+ CPVDAI Sbjct: 42 ERCIACKL--CEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 98 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + + + Sbjct: 42 ERCIACKLCEAICPAQAIVIEADERED 68 Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 83 CIYCGL--CQEACPVDAIVEGPNF 104 >gi|330447307|ref|ZP_08310957.1| cytochrome c oxidase accessory protein CcoG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491498|dbj|GAA05454.1| cytochrome c oxidase accessory protein CcoG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 475 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 9/44 (20%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 +CI C CV+VCP EG + ECI+CG C C Sbjct: 272 DCIDCNL--CVQVCPTGIDIREGMQY------ECINCGACVDAC 307 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 18/62 (29%), Gaps = 25/62 (40%) Query: 17 CVEVCPVDCF--------------------YEGENFLAIHPDE-----CIDCGVCEPECP 51 C+ +CP F G +P E CIDC +C CP Sbjct: 225 CIHMCPYARFQSAMFDKDSYIVGYDTRRGEKRGPRSRKANPAEQGLGDCIDCNLCVQVCP 284 Query: 52 VD 53 Sbjct: 285 TG 286 >gi|303327364|ref|ZP_07357805.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfovibrio sp. 3_1_syn3] gi|302862304|gb|EFL85237.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Desulfovibrio sp. 3_1_syn3] Length = 259 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 T+ C C CV+ CP+ E + CI C C CPV+A D Sbjct: 186 TDACTQC--MICVQGCPMGVISEDDPHQV--AAGCIRCCACVKFCPVEAKYFDDP 236 >gi|283853853|ref|ZP_06371070.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] gi|283570750|gb|EFC18793.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio sp. FW1012B] Length = 250 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ CV+VCP ++ + + + CI C C CP A Sbjct: 113 CNHCEAPMCVKVCPTQATFQRPDGIVMMDFHRCIGCRYCMAGCPYGA 159 >gi|268326009|emb|CBH39597.1| putative indolepyruvate ferredoxin oxidoreductase, alpha subunit [uncultured archaeon] Length = 595 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 2 TYVVTENCILCKHTDCVE-VCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 + V ENC C CVE CP E+ I+ C CG+C CP AI+ Sbjct: 542 PFTVNENCTGC--RKCVEFGCP--AIEFDEDSARINA-LCTGCGICAQICPNKAIE 592 >gi|302877304|ref|YP_003845868.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Gallionella capsiferriformans ES-2] gi|302580093|gb|ADL54104.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Gallionella capsiferriformans ES-2] Length = 542 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 9 CILCKHT----DCVEVCPVDC-FYEGE-NFLAIHPDECIDCGVCEPECPVDAI 55 C+ C + +C VCP + G + D C CG+C ECP AI Sbjct: 483 CLSCGNCFECDNCYGVCPDNAVIKLGPGKGFQFNYDYCKGCGLCVAECPCGAI 535 >gi|225568763|ref|ZP_03777788.1| hypothetical protein CLOHYLEM_04842 [Clostridium hylemonae DSM 15053] gi|225162262|gb|EEG74881.1| hypothetical protein CLOHYLEM_04842 [Clostridium hylemonae DSM 15053] Length = 203 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 3 YVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 Y +T+ C C C +CP C +G I + C+ CG+C CPV A++ Sbjct: 149 YRITDQCTGCGV--CQNICPQQCIRKGTP-CEIAQEHCLHCGLCYENCPVRAVE 199 >gi|297584153|ref|YP_003699933.1| dimethylsulfoxide reductase subunit B [Bacillus selenitireducens MLS10] gi|297142610|gb|ADH99367.1| dimethylsulfoxide reductase, chain B [Bacillus selenitireducens MLS10] Length = 179 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 2 TYV--VTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPD 58 YV VT +C C CVE CP ++ E+ + ++C+ C +C CP D Sbjct: 49 PYVDHVTISCNHCDSPKCVENCPTGAMHKREDGIVDYDHEKCVGCKMCLWSCPYDGPVYL 108 Query: 59 TEPG 62 + G Sbjct: 109 EDEG 112 >gi|121533858|ref|ZP_01665684.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] gi|121307369|gb|EAX48285.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Thermosinus carboxydivorans Nor1] Length = 201 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 C C + C+ VCP Y+ + + + +C+ CG C CP Sbjct: 58 CNHCANPPCLAVCPTGATYKRPDGIVALDAGKCMGCGYCVVACPYQ 103 >gi|16766951|ref|NP_462566.1| oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167549092|ref|ZP_02342851.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990901|ref|ZP_02572000.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262525|ref|ZP_03162599.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422231|gb|AAL22525.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240780|gb|EDY23400.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205325550|gb|EDZ13389.1| protein AegA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330788|gb|EDZ17552.1| protein AegA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248814|emb|CBG26667.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995921|gb|ACY90806.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160202|emb|CBW19724.1| putative electron-transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914692|dbj|BAJ38666.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226722|gb|EFX51772.1| Electron transport protein HydN [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132026|gb|ADX19456.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990516|gb|AEF09499.1| putative oxidoreductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 157 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 17/46 (36%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C VCPV + + CI C C CP A Sbjct: 58 CHQCEDAPCANVCPVQAIRRDRGHIFVTSSRCIGCKSCMLACPFGA 103 >gi|15601890|ref|NP_244962.1| NrfC [Pasteurella multocida subsp. multocida str. Pm70] gi|12720226|gb|AAK02109.1| NrfC [Pasteurella multocida subsp. multocida str. Pm70] Length = 226 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C + CV VCP F + E + +H D C+ C C CP Sbjct: 94 SCQHCHNAPCVHVCPTGASFVDKETGIVDVHKDLCVGCQYCIAVCPY 140 >gi|53714499|ref|YP_100491.1| putative ferredoxin [Bacteroides fragilis YCH46] gi|253565000|ref|ZP_04842456.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52217364|dbj|BAD49957.1| putative ferredoxin [Bacteroides fragilis YCH46] gi|251946465|gb|EES86842.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 278 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C C ++CPV +G+ L + CI C C CP A DT Sbjct: 211 CTHCG--ACAKMCPVSAIAKGDE-LNTDAERCIKCCACVKGCPQKARVYDTP 259 Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 10/25 (40%) Query: 36 HPDECIDCGVCEPECPVDAIKPDTE 60 C CG C CPV AI E Sbjct: 207 DESLCTHCGACAKMCPVSAIAKGDE 231 >gi|189500792|ref|YP_001960262.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496233|gb|ACE04781.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Chlorobium phaeobacteroides BS1] Length = 199 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 C+ C++T C+ CP Y+ E+ + I+ D C+ C C CP DA P Sbjct: 60 CMHCENTPCLSACPSGATYKTEDGIIRINYDRCMGCYACSIACPYDARYP 109 >gi|256839685|ref|ZP_05545194.1| pyruvate formate-lyase 1-activating enzyme [Parabacteroides sp. D13] gi|256738615|gb|EEU51940.1| pyruvate formate-lyase 1-activating enzyme [Parabacteroides sp. D13] Length = 301 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 2/48 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C CV CP E + C CG C CP A++ Sbjct: 52 CIGCG--ACVNACPTGALTLTEAGIVTDRSLCRTCGRCAEVCPTLAME 97 Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 9/42 (21%) Query: 21 CPVDC--------FYEGENFLAIHPDECIDCGVCEPECPVDA 54 CP+ C L +CI CG C CP A Sbjct: 26 CPLACVWCHNPEGISPRAEKLYTRK-KCIGCGACVNACPTGA 66 >gi|257783995|ref|YP_003179212.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Atopobium parvulum DSM 20469] gi|257472502|gb|ACV50621.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Atopobium parvulum DSM 20469] Length = 461 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 6 TENCILCKHTD------CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVD 53 C+ C C++VCP +C + I + C+ CG+C CP + Sbjct: 59 ANRCLRCASGKPEACSRCLDVCPANCIDIHNQSVRIDDEACLQCGLCVAACPTE 112 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 3/44 (6%) Query: 9 CILCKHTDCVEVCPVDCFYEGEN-FLAIHPDECIDCGVCEPECP 51 C +C C C E L I C++CG CE CP Sbjct: 328 CTVCGD--CKNTCTTHAIDIDERGKLTIKMPFCVNCGACEIVCP 369 >gi|220905127|ref|YP_002480439.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869426|gb|ACL49761.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 306 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 + C LC C+++C F I +C CGVC CP A++ + Sbjct: 70 QACTLCG--RCMDLCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWY 127 Query: 67 L 67 L Sbjct: 128 L 128 >gi|212711816|ref|ZP_03319944.1| hypothetical protein PROVALCAL_02891 [Providencia alcalifaciens DSM 30120] gi|212685338|gb|EEB44866.1| hypothetical protein PROVALCAL_02891 [Providencia alcalifaciens DSM 30120] Length = 294 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 4 VVTENCILCKHTD-----CVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V+ + C+ + + C CPV G I + C CG C CPVDAI+ + Sbjct: 14 VINDKCVHKRLKNSVCNNCANSCPVGAISFGFMDAKIDNELCYQCGNCLFTCPVDAIE-N 72 Query: 59 TEPGLELW 66 EP + Sbjct: 73 IEPHERTY 80 Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CILC C +VC +I C C C+ C Sbjct: 198 SCILCG--ACAKVCDEQAIEIENYQFSIDDKRCTGCMSCQVVC 238 >gi|190574690|ref|YP_001972535.1| putative respiratory nitrate reductase subunit [Stenotrophomonas maltophilia K279a] gi|190012612|emb|CAQ46240.1| putative respiratory nitrate reductase subunit [Stenotrophomonas maltophilia K279a] Length = 514 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 9 CILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPG 62 C C + CV CP Y E + + I D+C +C CP I + + G Sbjct: 183 CEHCLNPACVSACPSGAIYKREEDGIVLIDQDKCRGWRMCVSACPYKKIYYNWKSG 238 >gi|163741480|ref|ZP_02148871.1| NADH dehydrogenase subunit I [Phaeobacter gallaeciensis 2.10] gi|161385214|gb|EDQ09592.1| NADH dehydrogenase subunit I [Phaeobacter gallaeciensis 2.10] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRED 89 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|150403238|ref|YP_001330532.1| thiamine pyrophosphate binding domain-containing protein [Methanococcus maripaludis C7] gi|150034268|gb|ABR66381.1| thiamine pyrophosphate protein domain protein TPP-binding [Methanococcus maripaludis C7] Length = 612 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 9 CILCKHTDCVEV--CPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 C CK CVE CP + I + C CG+C CPVDAIK E Sbjct: 563 CTGCK--ICVERLGCP--AITLNGDIPEIM-ENCTGCGLCMAVCPVDAIKEVDEQ 612 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENF 32 + ENC C C+ VCPVD E + Sbjct: 587 IMENCTGCGL--CMAVCPVDAIKEVDEQ 612 >gi|115502490|sp|Q0MQI2|NDUS8_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; AltName: Full=Complex I-23kD; Short=CI-23kD; AltName: Full=NADH-ubiquinone oxidoreductase 23 kDa subunit; Flags: Precursor gi|111661819|gb|ABH12161.1| mitochondrial complex I subunit NDUFS8 [Gorilla gorilla] Length = 210 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 109 ERCIACKL--CEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165 Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI + EP + Sbjct: 109 ERCIACKLCEAICPAQAITIEAEPRAD 135 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 150 CIYCGF--CQEACPVDAIVEGPNF 171 >gi|90410739|ref|ZP_01218754.1| HydN [Photobacterium profundum 3TCK] gi|90328370|gb|EAS44668.1| HydN [Photobacterium profundum 3TCK] Length = 182 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C C +VCP + + + + CI C C CP A Sbjct: 58 CRQCDDAPCAQVCPNNAIVLEDGHVKVVQSRCIGCKTCVIACPYGA 103 >gi|78485170|ref|YP_391095.1| NADH dehydrogenase subunit I [Thiomicrospira crunogena XCL-2] gi|115502545|sp|Q31HF2|NUOI_THICR RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|78363456|gb|ABB41421.1| NADH dehydrogenase I chain I [Thiomicrospira crunogena XCL-2] Length = 163 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-EGEN---------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP + E E I +CI CG CE CPVDA+ Sbjct: 62 ERCIACKL--CEAVCPANAITIESEERDDGTRRTTQYDIDMFKCIYCGFCEEACPVDAV 118 Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP +AI ++E + Sbjct: 62 ERCIACKLCEAVCPANAITIESEERDD 88 >gi|85374152|ref|YP_458214.1| NADH dehydrogenase subunit I [Erythrobacter litoralis HTCC2594] gi|123409621|sp|Q2NA74|NUOI_ERYLH RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|84787235|gb|ABC63417.1| NADH dehydrogenase I, I subunit [Erythrobacter litoralis HTCC2594] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY----------EGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAVCPAQAITIESEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 117 Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++EP + Sbjct: 61 ERCIACKLCEAVCPAQAITIESEPRDD 87 >gi|134300063|ref|YP_001113559.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052763|gb|ABO50734.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Desulfotomaculum reducens MI-1] Length = 267 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ C C E C E N + P +C CG C CP +AI+ + E +L Sbjct: 51 CLECG--MCRESCRFGAISETFNMI---PMKCEGCGACVLVCPQEAIRLEDVKTGETYL 104 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 12/27 (44%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 G I C++CG+C C AI Sbjct: 40 GAKEAVIDSSICLECGMCRESCRFGAI 66 >gi|332098105|gb|EGJ03078.1| electron transport complex, RnfABCDGE type, B subunit [Shigella dysenteriae 155-74] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|320656571|gb|EFX24467.1| putative electron transport protein ygfS [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|295112187|emb|CBL28937.1| Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Synergistetes bacterium SGP1] Length = 57 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V + C+ C+ CV CPV + + +C++CG C CPV AI Sbjct: 6 VDSGTCVGCE--SCVGACPVSAISMTDGHAQVDEGKCVECGSCVSTCPVSAI 55 >gi|282163197|ref|YP_003355582.1| hypothetical protein MCP_0527 [Methanocella paludicola SANAE] gi|282155511|dbj|BAI60599.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 294 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 V C+ C C C + E AI P C CGVC CP AI P Sbjct: 64 VDESACVACG--ACETYCRFNAVSMRE-HAAIDPTACEACGVCVAVCPAGAISLVERPCG 120 Query: 64 ELWL 67 E+++ Sbjct: 121 EVYV 124 >gi|262381260|ref|ZP_06074398.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296437|gb|EEY84367.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 286 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C CV VCP D F + GE + + CI CG C CP ++ P Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSVLHSEFPPE 65 Query: 64 E 64 + Sbjct: 66 K 66 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L I + CI CG C CP D I G Sbjct: 3 LNIDQESCIKCGKCVRVCPSD-IFTQERAGE 32 >gi|239831694|ref|ZP_04680023.1| NADH-quinone oxidoreductase, chain I [Ochrobactrum intermedium LMG 3301] gi|239823961|gb|EEQ95529.1| NADH-quinone oxidoreductase, chain I [Ochrobactrum intermedium LMG 3301] Length = 163 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 22 PVDCFYEGENFLAIHP---DECIDCGVCEPECPVDAIKPDTEP 61 PV + GE+ L +P + CI C +CE CP AI + P Sbjct: 42 PVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGP 84 Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 103 CIYCGF--CQEACPVDAIVEGPNF 124 >gi|239787653|emb|CAX84120.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein precursor [uncultured bacterium] Length = 244 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+H C VCP ++ ++ L + CI C C CP A Sbjct: 103 CNHCEHPPCKHVCPTAATFQRQDGLVLVDMHRCIGCRYCIIACPYKA 149 >gi|218689575|ref|YP_002397787.1| electron transport complex protein RnfB [Escherichia coli ED1a] gi|331647117|ref|ZP_08348211.1| electron transport complex protein RnfB [Escherichia coli M605] gi|254807925|sp|B7MV10|RNFB_ECO81 RecName: Full=Electron transport complex protein rnfB gi|218427139|emb|CAR07926.1| putative iron-sulfur protein [Escherichia coli ED1a] gi|281178700|dbj|BAI55030.1| conserved hypothetical protein [Escherichia coli SE15] gi|330911435|gb|EGH39945.1| electron transport complex protein RnfB [Escherichia coli AA86] gi|331043900|gb|EGI16036.1| electron transport complex protein RnfB [Escherichia coli M605] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|163738809|ref|ZP_02146223.1| NADH-quinone oxidoreductase, chain I [Phaeobacter gallaeciensis BS107] gi|161388137|gb|EDQ12492.1| NADH-quinone oxidoreductase, chain I [Phaeobacter gallaeciensis BS107] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRED 89 >gi|121534132|ref|ZP_01665957.1| Fe-S cluster domain protein [Thermosinus carboxydivorans Nor1] gi|121307235|gb|EAX48152.1| Fe-S cluster domain protein [Thermosinus carboxydivorans Nor1] Length = 444 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 + C C +C++ CP + I CIDCG C CP A Sbjct: 11 IANRCQGC--VNCIKRCPTEAIRIRGGKAQITEARCIDCGECIRRCPNHA 58 >gi|119899348|ref|YP_934561.1| putative benzoyl-CoA oxygenase component A [Azoarcus sp. BH72] gi|119671761|emb|CAL95675.1| putative Benzoyl-CoA oxygenase component A [Azoarcus sp. BH72] Length = 416 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 E CI C C E+CPVD + D C C C CP AI Sbjct: 19 EICIRCN--TCEEICPVDAITHDNLNYVVKFDVCNGCLACISPCPTGAI 65 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 35 IHPDECIDCGVCEPECPVDAIKPD 58 I P+ CI C CE CPVDAI D Sbjct: 16 IDPEICIRCNTCEEICPVDAITHD 39 >gi|26247875|ref|NP_753915.1| electron transport complex protein RnfB [Escherichia coli CFT073] gi|227885956|ref|ZP_04003761.1| NADH dehydrogenase (ubiquinone) [Escherichia coli 83972] gi|300988845|ref|ZP_07178840.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 45-1] gi|301050124|ref|ZP_07197028.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 185-1] gi|81748476|sp|Q8FH96|RNFB_ECOL6 RecName: Full=Electron transport complex protein rnfB gi|26108278|gb|AAN80480.1|AE016761_55 Electron transport complex protein rnfB [Escherichia coli CFT073] gi|227837048|gb|EEJ47514.1| NADH dehydrogenase (ubiquinone) [Escherichia coli 83972] gi|300298146|gb|EFJ54531.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 185-1] gi|300407383|gb|EFJ90921.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 45-1] gi|307553651|gb|ADN46426.1| electron transport complex protein RnfB [Escherichia coli ABU 83972] gi|315291968|gb|EFU51320.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 153-1] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|15802042|ref|NP_288064.1| electron transport complex protein RnfB [Escherichia coli O157:H7 EDL933] gi|12515617|gb|AAG56617.1|AE005386_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|148262605|ref|YP_001229311.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Geobacter uraniireducens Rf4] gi|146396105|gb|ABQ24738.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Geobacter uraniireducens Rf4] Length = 368 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLK 68 C C C++ C D E I P++C CG C C AI EL +K Sbjct: 195 CTACG--ICLKSCAHDAIAIIEGKAVIDPEKCTGCGRCITACLQKAINVQWNEASELVMK 252 Query: 69 INSEYAT 75 E+A Sbjct: 253 KMCEFAK 259 >gi|83953899|ref|ZP_00962620.1| NADH dehydrogenase subunit I [Sulfitobacter sp. NAS-14.1] gi|83841844|gb|EAP81013.1| NADH dehydrogenase subunit I [Sulfitobacter sp. NAS-14.1] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRDD 89 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|193071591|ref|ZP_03052498.1| iron-sulfur cluster-binding protein [Escherichia coli E110019] gi|312969693|ref|ZP_07783876.1| uncharacterized ferredoxin-like protein ydhX [Escherichia coli 1827-70] gi|192955089|gb|EDV85585.1| iron-sulfur cluster-binding protein [Escherichia coli E110019] gi|310337978|gb|EFQ03067.1| uncharacterized ferredoxin-like protein ydhX [Escherichia coli 1827-70] gi|320197853|gb|EFW72461.1| NrfC-like protein [Escherichia coli EC4100B] gi|323186056|gb|EFZ71412.1| hypothetical protein ECOK1357_0518 [Escherichia coli 1357] gi|323948034|gb|EGB44026.1| 4Fe-4S binding domain-containing protein [Escherichia coli H120] gi|332096031|gb|EGJ01036.1| hypothetical protein SB359474_1636 [Shigella boydii 3594-74] gi|332756987|gb|EGJ87330.1| hypothetical protein SF434370_1951 [Shigella flexneri 4343-70] gi|333003867|gb|EGK23402.1| hypothetical protein SFK218_2582 [Shigella flexneri K-218] gi|333005332|gb|EGK24852.1| hypothetical protein SFVA6_2053 [Shigella flexneri VA-6] Length = 184 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|16129586|ref|NP_416145.1| electron transport complex protein, iron-sulfur protein, required for the reduction of SoxR [Escherichia coli str. K-12 substr. MG1655] gi|89108470|ref|AP_002250.1| predicted iron-sulfur protein [Escherichia coli str. K-12 substr. W3110] gi|157161090|ref|YP_001458408.1| electron transport complex protein RnfB [Escherichia coli HS] gi|170020020|ref|YP_001724974.1| electron transport complex protein RnfB [Escherichia coli ATCC 8739] gi|170081292|ref|YP_001730612.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli str. K-12 substr. DH10B] gi|193070250|ref|ZP_03051194.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E110019] gi|194431902|ref|ZP_03064192.1| electron transport complex, RnfABCDGE type, B subunit [Shigella dysenteriae 1012] gi|194436652|ref|ZP_03068753.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 101-1] gi|218554196|ref|YP_002387109.1| electron transport complex protein RnfB [Escherichia coli IAI1] gi|238900844|ref|YP_002926640.1| putative iron-sulfur protein [Escherichia coli BW2952] gi|253773414|ref|YP_003036245.1| electron transport complex protein RnfB [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161690|ref|YP_003044798.1| electron transport complex protein RnfB [Escherichia coli B str. REL606] gi|256018179|ref|ZP_05432044.1| electron transport complex protein RnfB [Shigella sp. D9] gi|256022711|ref|ZP_05436576.1| electron transport complex protein RnfB [Escherichia sp. 4_1_40B] gi|260855453|ref|YP_003229344.1| putative iron-sulfur protein [Escherichia coli O26:H11 str. 11368] gi|260868120|ref|YP_003234522.1| putative iron-sulfur protein [Escherichia coli O111:H- str. 11128] gi|300819311|ref|ZP_07099510.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 107-1] gi|300931502|ref|ZP_07146820.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 187-1] gi|300950448|ref|ZP_07164366.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 116-1] gi|300959101|ref|ZP_07171189.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 175-1] gi|301029279|ref|ZP_07192384.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 196-1] gi|301647800|ref|ZP_07247588.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 146-1] gi|307138282|ref|ZP_07497638.1| electron transport complex protein RnfB [Escherichia coli H736] gi|312969649|ref|ZP_07783832.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 1827-70] gi|331642221|ref|ZP_08343356.1| electron transport complex protein RnfB [Escherichia coli H736] gi|332279227|ref|ZP_08391640.1| ferredoxin II [Shigella sp. D9] gi|6176588|sp|P77223|RNFB_ECOLI RecName: Full=Electron transport complex protein rnfB gi|166991042|sp|A8A0H1|RNFB_ECOHS RecName: Full=Electron transport complex protein rnfB gi|189043385|sp|B1IQC6|RNFB_ECOLC RecName: Full=Electron transport complex protein rnfB gi|226735414|sp|B7M0I5|RNFB_ECO8A RecName: Full=Electron transport complex protein rnfB gi|226735415|sp|B1XF93|RNFB_ECODH RecName: Full=Electron transport complex protein rnfB gi|259646559|sp|C4ZY91|RNFB_ECOBW RecName: Full=Electron transport complex protein rnfB gi|1742687|dbj|BAA15383.1| predicted iron-sulfur protein [Escherichia coli str. K12 substr. W3110] gi|1787915|gb|AAC74700.1| electron transport complex protein, iron-sulfur protein, required for the reduction of SoxR [Escherichia coli str. K-12 substr. MG1655] gi|157066770|gb|ABV06025.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli HS] gi|169754948|gb|ACA77647.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli ATCC 8739] gi|169889127|gb|ACB02834.1| inner membrane iron-sulfur protein in SoxR-reducing complex [Escherichia coli str. K-12 substr. DH10B] gi|192956431|gb|EDV86890.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli E110019] gi|194419810|gb|EDX35889.1| electron transport complex, RnfABCDGE type, B subunit [Shigella dysenteriae 1012] gi|194424684|gb|EDX40670.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 101-1] gi|218360964|emb|CAQ98537.1| putative iron-sulfur protein [Escherichia coli IAI1] gi|238862599|gb|ACR64597.1| predicted iron-sulfur protein [Escherichia coli BW2952] gi|242377359|emb|CAQ32105.1| member of SoxR-reducing complex [Escherichia coli BL21(DE3)] gi|253324458|gb|ACT29060.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973591|gb|ACT39262.1| electron transport complex protein RnfB [Escherichia coli B str. REL606] gi|253977786|gb|ACT43456.1| electron transport complex protein RnfB [Escherichia coli BL21(DE3)] gi|257754102|dbj|BAI25604.1| predicted iron-sulfur protein [Escherichia coli O26:H11 str. 11368] gi|257764476|dbj|BAI35971.1| predicted iron-sulfur protein [Escherichia coli O111:H- str. 11128] gi|260449248|gb|ACX39670.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli DH1] gi|299877815|gb|EFI86026.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 196-1] gi|300314289|gb|EFJ64073.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 175-1] gi|300450216|gb|EFK13836.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 116-1] gi|300460705|gb|EFK24198.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 187-1] gi|300528082|gb|EFK49144.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 107-1] gi|301074084|gb|EFK88890.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli MS 146-1] gi|309701854|emb|CBJ01166.1| electron transport complex protein [Escherichia coli ETEC H10407] gi|310337934|gb|EFQ03023.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 1827-70] gi|315136269|dbj|BAJ43428.1| electron transport complex protein RnfB [Escherichia coli DH1] gi|315618814|gb|EFU99397.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 3431] gi|323152868|gb|EFZ39138.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli EPECa14] gi|323180942|gb|EFZ66480.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 1180] gi|323186100|gb|EFZ71456.1| electron transport complex, RnfABCDGE type, B subunit [Escherichia coli 1357] gi|323937423|gb|EGB33701.1| electron transporter [Escherichia coli E1520] gi|323940295|gb|EGB36487.1| electron transporter [Escherichia coli E482] gi|323962198|gb|EGB57792.1| electron transporter [Escherichia coli H489] gi|323973846|gb|EGB69019.1| electron transporter [Escherichia coli TA007] gi|331039019|gb|EGI11239.1| electron transport complex protein RnfB [Escherichia coli H736] gi|332091212|gb|EGI96301.1| electron transport complex, RnfABCDGE type, B subunit [Shigella boydii 5216-82] gi|332101579|gb|EGJ04925.1| ferredoxin II [Shigella sp. D9] gi|332343346|gb|AEE56680.1| electron transport complex RnfB [Escherichia coli UMNK88] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 1 MTYVVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI--K 56 M V+ EN CI C T C++ CPVD + + D C C +C CP I + Sbjct: 108 MVAVIDENNCIGC--TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165 Query: 57 PDTEPGLELWLKIN 70 P E +N Sbjct: 166 PVAETPDSWKWDLN 179 >gi|329298911|ref|ZP_08256247.1| electron transport complex protein RnfB [Plautia stali symbiont] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIK 56 NCI C T C++ CPVD + + D C C +C CP D I+ Sbjct: 116 NCIGC--TKCIQACPVDAIVGATRAMHTVLSDVCTGCDLCVALCPTDCIE 163 Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 11/21 (52%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C C CPVDAI Sbjct: 112 IDEANCIGCTKCIQACPVDAI 132 >gi|313200191|ref|YP_004038849.1| cytochrome c oxidase accessory protein ccog [Methylovorus sp. MP688] gi|312439507|gb|ADQ83613.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. MP688] Length = 479 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C + CV VCP I CI CG+C C Sbjct: 268 DCIDCGY--CVNVCPTGVDIR--KGFQID---CIACGLCIDAC 303 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 8/14 (57%) Query: 40 CIDCGVCEPECPVD 53 CIDCG C CP Sbjct: 269 CIDCGYCVNVCPTG 282 >gi|271502700|ref|YP_003335726.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Dickeya dadantii Ech586] gi|270346255|gb|ACZ79020.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Dickeya dadantii Ech586] Length = 177 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 C C++ C VCP D ++ + + CI C C CP AI Sbjct: 57 CHQCENAPCASVCPHDALVRHQDSIQVISSRCIGCKSCVIACPFGAI 103 >gi|261403041|ref|YP_003247265.1| NIL domain protein [Methanocaldococcus vulcanius M7] gi|261370034|gb|ACX72783.1| NIL domain protein [Methanocaldococcus vulcanius M7] Length = 131 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAI-HPDECIDCGVCEPECPVDAIK 56 E C+ C C+ CP++ Y +++ I +EC+ C C CP AI+ Sbjct: 80 EKCVHCG--CCITQCPINVIYMDDDYNVIFKEEECVGCKNCLKACPFKAIE 128 >gi|238925110|ref|YP_002938627.1| MurB family protein [Eubacterium rectale ATCC 33656] gi|238876786|gb|ACR76493.1| MurB family protein [Eubacterium rectale ATCC 33656] Length = 1070 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 12/58 (20%) Query: 5 VTENC-----ILCKHTDCVEVCPVDCFYE-GENFLAIHP----DECIDCGVCEPECPV 52 +T+NC + C C +CP D G + P D+C +CG+C CPV Sbjct: 555 ITQNCNMNLCVGCG--ACSSICPNDAITMKGNDLGYYKPIVNIDKCSNCGICSKICPV 610 Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%) Query: 36 HPDECIDCGVCEPECPVDAI 55 + + C+ CG C CP DAI Sbjct: 560 NMNLCVGCGACSSICPNDAI 579 >gi|257065401|ref|YP_003145073.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] gi|256793054|gb|ACV23724.1| Fe-S-cluster-containing hydrogenase subunit [Slackia heliotrinireducens DSM 20476] Length = 193 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGEN-FLAIHPDE-CIDCGVCEPECPVDAIKPDTEPGL 63 +C C++ CV CPV Y+ L +H D CI C C CP A + D L Sbjct: 57 SCNHCENPACVANCPVGAMYKDPETGLVLHDDNLCIKCETCMRSCPYGAPQHDMVEDL 114 >gi|291287581|ref|YP_003504397.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290884741|gb|ADD68441.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 184 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C++T C VCP Y + + I CI C C CP DA Sbjct: 63 CQHCENTPCATVCPTSATYRTDEGVVLIDYKRCIICKACMTACPYDA 109 >gi|226327967|ref|ZP_03803485.1| hypothetical protein PROPEN_01849 [Proteus penneri ATCC 35198] gi|225203671|gb|EEG86025.1| hypothetical protein PROPEN_01849 [Proteus penneri ATCC 35198] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV VCP + EN + + + CI C C CP Sbjct: 63 SCQHCEDAPCVSVCPTGASFIDENGIVQVKKELCIGCDYCVGACPY 108 >gi|218184578|gb|EEC67005.1| hypothetical protein OsI_33716 [Oryza sativa Indica Group] Length = 555 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 10/63 (15%) Query: 2 TYVVTENC--ILCKHTDCVEVCPV-----DCFYEGENF--LAIHPDECIDCGVCEPECPV 52 V + C C +C CPV C G I + CI CG+C +CP Sbjct: 11 AVVDEDRCKPNKCG-QECRRSCPVVKIGKHCIEIGPRSKSALISEELCIGCGICVKKCPF 69 Query: 53 DAI 55 AI Sbjct: 70 GAI 72 >gi|220933486|ref|YP_002512385.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994796|gb|ACL71398.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 84 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCG------VCEPECPVDA 54 M ++T+ CI C C CP G+ I P C +C C CPVD Sbjct: 1 MALMITDECINCDV--CEPECPNGAISPGDEIYVIDPALCTECVGHYDTPQCVEVCPVDC 58 Query: 55 IKPDTE 60 I D + Sbjct: 59 IPKDPD 64 >gi|154414441|ref|XP_001580248.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] gi|121914463|gb|EAY19262.1| 4Fe-4S binding domain containing protein [Trichomonas vaginalis G3] Length = 658 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 9/71 (12%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA--IHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 CI C +CP D + PD+C CG+CE CP ++ T Sbjct: 595 CIGCGRCT---MCPNDAITLIPAKWVYKVDPDKCNGCGLCESVCPTNSCGLITREKAR-- 649 Query: 67 LKINSEYATQW 77 ++N++ A W Sbjct: 650 -ELNAK-AKHW 658 Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%) Query: 31 NFLAIHPDECIDCGVCEPECPVDAI 55 N L +P CI CG C CP DAI Sbjct: 587 NHLV-NPYTCIGCGRCTM-CPNDAI 609 >gi|9651771|gb|AAF91263.1|AF230199_5 pyruvate oxidoreductase gamma subunit [Methanococcus maripaludis] Length = 85 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 + C+ C+ +C CP C E + I D C C +CE ECPV AIK + E Sbjct: 32 DKCVKCE--NCYIFCPEGCIQEKDGKFEIDYDYCKGCLICEKECPVKAIKAEREE 84 >gi|56478215|ref|YP_159804.1| electron transport complex protein RnfB [Aromatoleum aromaticum EbN1] gi|81677376|sp|Q5P1B1|RNFB_AZOSE RecName: Full=Electron transport complex protein rnfB gi|56314258|emb|CAI08903.1| Electron transport complex protein [Aromatoleum aromaticum EbN1] Length = 183 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP-DTEPGLE 64 + CI C T C++ CPVD + + P C C +C CPVD I LE Sbjct: 111 QLCIGC--TLCIQACPVDAIVGAAKHMHTVVPALCTGCELCVAPCPVDCIAMTPLPETLE 168 Query: 65 LW 66 W Sbjct: 169 TW 170 Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 35 IHPDECIDCGVCEPECPVDAI 55 I CI C +C CPVDAI Sbjct: 108 IDEQLCIGCTLCIQACPVDAI 128 >gi|238796066|ref|ZP_04639577.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia mollaretii ATCC 43969] gi|238720011|gb|EEQ11816.1| 4Fe-4S ferredoxin, iron-sulfur binding [Yersinia mollaretii ATCC 43969] Length = 173 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 18/46 (39%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDA 54 C C+ C CP GE+ + + CI C C CP A Sbjct: 58 CHQCEDAPCENSCPNGAIVTGEHGVQVLASRCIGCKTCMLVCPFGA 103 >gi|301309723|ref|ZP_07215662.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|300831297|gb|EFK61928.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 286 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C CV VCP D F + GE + + CI CG C CP ++ P Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSVLHSEFPPE 65 Query: 64 E 64 + Sbjct: 66 K 66 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L I + CI CG C CP D I G Sbjct: 3 LNIDQESCIKCGKCVRVCPSD-IFTQERAGE 32 >gi|298376411|ref|ZP_06986366.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] gi|298266289|gb|EFI07947.1| 4Fe-4S binding domain-containing protein [Bacteroides sp. 3_1_19] Length = 286 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 7 ENCILCKHTDCVEVCPVDCFYE---GENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 E+CI C CV VCP D F + GE + + CI CG C CP ++ P Sbjct: 8 ESCIKCG--KCVRVCPSDIFTQERAGETIGLVRVESCIVCGHCVDVCPTGSVLHSEFPPE 65 Query: 64 E 64 + Sbjct: 66 K 66 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 33 LAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 L I + CI CG C CP D I G Sbjct: 3 LNIDQESCIKCGKCVRVCPSD-IFTQERAGE 32 >gi|284922834|emb|CBG35923.1| putative oxidoreductase, 4Fe-4S subunit [Escherichia coli 042] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|302383058|ref|YP_003818881.1| NADH-quinone oxidoreductase, chain I [Brevundimonas subvibrioides ATCC 15264] gi|302193686|gb|ADL01258.1| NADH-quinone oxidoreductase, chain I [Brevundimonas subvibrioides ATCC 15264] Length = 163 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG+C+ CPVDAI Sbjct: 62 ERCIACKL--CEAICPAQAITIESEPRSDGSRRTTRYDIDMVKCIYCGLCQEACPVDAI 118 >gi|284175349|ref|ZP_06389318.1| oxydoreductase, putative [Sulfolobus solfataricus 98/2] gi|261601282|gb|ACX90885.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus solfataricus 98/2] Length = 280 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 95 YNIPINCFHCINAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 147 >gi|253998122|ref|YP_003050185.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. SIP3-4] gi|253984801|gb|ACT49658.1| cytochrome c oxidase accessory protein CcoG [Methylovorus sp. SIP3-4] Length = 479 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C + CV VCP I CI CG+C C Sbjct: 268 DCIDCGY--CVNVCPTGVDIR--KGFQID---CIACGLCIDAC 303 Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 8/14 (57%) Query: 40 CIDCGVCEPECPVD 53 CIDCG C CP Sbjct: 269 CIDCGYCVNVCPTG 282 >gi|227356178|ref|ZP_03840567.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] gi|227163642|gb|EEI48558.1| formate-dependent nitrite reductase [Fe-S] protein [Proteus mirabilis ATCC 29906] Length = 192 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPV 52 +C C+ CV VCP + EN + + + CI C C CP Sbjct: 63 SCQHCEDAPCVSVCPTGASFIDENGIVQVKKELCIGCDYCVGACPY 108 >gi|242277663|ref|YP_002989792.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] gi|242120557|gb|ACS78253.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Desulfovibrio salexigens DSM 2638] Length = 259 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDA 54 C C+ CV VCP ++ + + + CI C C CP A Sbjct: 120 CNHCESPSCVRVCPTKATFKRPDGIVAMDYHRCIGCRYCMTGCPYGA 166 >gi|153009743|ref|YP_001370958.1| NADH dehydrogenase subunit I [Ochrobactrum anthropi ATCC 49188] gi|166918794|sp|A6X1M5|NUOI_OCHA4 RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|151561631|gb|ABS15129.1| NADH-quinone oxidoreductase, chain I [Ochrobactrum anthropi ATCC 49188] Length = 163 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 13/60 (21%) Query: 7 ENCILCKHTDCVEVCPVDCF--------YEGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C +CP +G I +CI CG C+ CPVDAI Sbjct: 61 ERCIACKL--CEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118 >gi|144900499|emb|CAM77363.1| Nitrogen fixation protein fixG [Magnetospirillum gryphiswaldense MSR-1] Length = 439 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 9/43 (20%) Query: 9 CILCKHTDCVEVCPVDC-FYEGENFLAIHPDECIDCGVCEPEC 50 CI CK CV+VCP EG CI CG+C C Sbjct: 224 CIDCK--MCVQVCPTGIDIREGLQM------ACIGCGLCVDAC 258 >gi|170728793|ref|YP_001762819.1| 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814140|gb|ACA88724.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Shewanella woodyi ATCC 51908] Length = 236 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA--IKPDTEPGL 63 +C CK+ CV VCP + E + + +C C C CP DA I +T+ Sbjct: 106 SCQQCKNAPCVTVCPTGAAHRDEKTGIVTMDAAKCAGCKYCIGACPYDARFINKETDVAD 165 Query: 64 ELWLKINSEYA 74 +NS+ A Sbjct: 166 NCDFCLNSKLA 176 >gi|121608149|ref|YP_995956.1| 4Fe-4S ferredoxin [Verminephrobacter eiseniae EF01-2] gi|121552789|gb|ABM56938.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Verminephrobacter eiseniae EF01-2] Length = 496 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 7/64 (10%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +CI C T CV+VCPV ECI CG+C C K PGL + Sbjct: 286 DCIDC--TLCVQVCPVGIDIRKGLQY-----ECIGCGLCVDACNTVMDKMHYPPGLIRYS 338 Query: 68 KINS 71 N+ Sbjct: 339 THNA 342 >gi|21243257|ref|NP_642839.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|289665567|ref|ZP_06487148.1| putative ferredoxin [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667749|ref|ZP_06488824.1| putative ferredoxin [Xanthomonas campestris pv. musacearum NCPPB4381] gi|325915117|ref|ZP_08177443.1| NADH:ubiquinone oxidoreductase chain I-like protein [Xanthomonas vesicatoria ATCC 35937] gi|325919642|ref|ZP_08181651.1| NADH:ubiquinone oxidoreductase chain I-like protein [Xanthomonas gardneri ATCC 19865] gi|21108791|gb|AAM37375.1| ferredoxin [Xanthomonas axonopodis pv. citri str. 306] gi|325538639|gb|EGD10309.1| NADH:ubiquinone oxidoreductase chain I-like protein [Xanthomonas vesicatoria ATCC 35937] gi|325549890|gb|EGD20735.1| NADH:ubiquinone oxidoreductase chain I-like protein [Xanthomonas gardneri ATCC 19865] Length = 94 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ + E C+ C C CP GE I P C +C C CPV+ Sbjct: 1 MSLKINELCVNCDV--CEPACPNQAISMGETIYVIDPARCTECVGHFDEAQCVVVCPVEC 58 Query: 55 IKPD--TEPGLELWLKINSEYATQWPNITTKKESLP 88 I PD + L + P + ++ P Sbjct: 59 IDPDPAIPETHDQLLAKLMQLQRDHPELYEQEPPAP 94 >gi|83942660|ref|ZP_00955121.1| NADH dehydrogenase subunit I [Sulfitobacter sp. EE-36] gi|83846753|gb|EAP84629.1| NADH dehydrogenase subunit I [Sulfitobacter sp. EE-36] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRDD 89 Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|117925097|ref|YP_865714.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Magnetococcus sp. MC-1] gi|117608853|gb|ABK44308.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Magnetococcus sp. MC-1] Length = 228 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVD 53 +C+ C+ CV VCP + Y E + + + D+CI C C CP Sbjct: 72 SCLHCEDAPCVPVCPTEASYKREEDGIVLVDYDKCIGCKYCSWNCPYG 119 >gi|257452975|ref|ZP_05618274.1| electron transport complex, RnfABCDGE type, B subunit [Fusobacterium sp. 3_1_5R] Length = 312 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP N I P +C +C +C CP AI Sbjct: 217 ACIGCG--MCQRTCPFGAIEVSNNLAKIDPAKCKNCQLCVVVCPTKAIY 263 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPV E + ++ + CI CG+C CP I Sbjct: 145 GYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCVKACPKSVI 188 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPD---------ECIDCGVCE 47 V E CI C CV+ CP ++ CI CG+C+ Sbjct: 168 VDEEACISCGL--CVKACPKSVIAMTPVAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQ 225 Query: 48 PECPVDAIK 56 CP AI+ Sbjct: 226 RTCPFGAIE 234 >gi|212712283|ref|ZP_03320411.1| hypothetical protein PROVALCAL_03369 [Providencia alcalifaciens DSM 30120] gi|268591142|ref|ZP_06125363.1| NADH-quinone oxidoreductase subunit I [Providencia rettgeri DSM 1131] gi|212685029|gb|EEB44557.1| hypothetical protein PROVALCAL_03369 [Providencia alcalifaciens DSM 30120] gi|291313368|gb|EFE53821.1| NADH-quinone oxidoreductase subunit I [Providencia rettgeri DSM 1131] Length = 180 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EG---ENFLAIHPDECIDCGVCEPECPVDAIK 56 E C+ C C CPV C +G F ++ CI CG+CE CP AI+ Sbjct: 58 ERCVACNL--CAVACPVGCISLQKAEHEDGRWYPEFFRVNFSRCIFCGLCEEACPTTAIQ 115 Query: 57 PDTEPGLELW 66 + + W Sbjct: 116 LTPDFEMADW 125 >gi|167762989|ref|ZP_02435116.1| hypothetical protein BACSTE_01354 [Bacteroides stercoris ATCC 43183] gi|167699329|gb|EDS15908.1| hypothetical protein BACSTE_01354 [Bacteroides stercoris ATCC 43183] Length = 373 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVD-AIKPDTEP 61 V TENCI C CV+ C D + E I +C+ CG C C D A+ D + Sbjct: 191 VATENCIGCN--ICVKHCAHDAIHLNAERKAEIDYTKCVGCGQCVALCQHDAAVVSDWDT 248 Query: 62 GLELWLKINSEYA 74 L KI +EY+ Sbjct: 249 SERLNYKI-AEYS 260 >gi|281355829|ref|ZP_06242323.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] gi|281318709|gb|EFB02729.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Victivallis vadensis ATCC BAA-548] Length = 57 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 V E C C+ CV CPV + +++ +C+DCG C CPV+AI Sbjct: 5 VNKEKCTGCE--TCVGECPVSAISMVDGKASVNAGDCVDCGACTGACPVEAI 54 >gi|146308115|ref|YP_001188580.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Pseudomonas mendocina ymp] gi|145576316|gb|ABP85848.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Pseudomonas mendocina ymp] Length = 470 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 +CI C T CV+VCP L ECI CG C C Sbjct: 269 DCIDC--TLCVQVCPTGIDIRDGLQL-----ECIGCGACIDAC 304 >gi|222055601|ref|YP_002537963.1| nitroreductase [Geobacter sp. FRC-32] gi|221564890|gb|ACM20862.1| nitroreductase [Geobacter sp. FRC-32] Length = 303 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDE---CIDCGVCEPECPVDAI 55 V TE C+ C C +CPV + + I + CI CG C CP +I Sbjct: 16 VETERCLHCG--KCAAICPVGVLQLKDENIKIDNNIHFGCIACGQCMMVCPNGSI 68 >gi|14250944|emb|CAC39239.1| FdhA-II protein [Eubacterium acidaminophilum] Length = 897 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 18/81 (22%) Query: 2 TYVVTEN--CILCKHTDCVEVCP----VDCFYEGENFLAIH----------PDECIDCGV 45 + +++ CI C CV VC E H +C+ CG Sbjct: 137 PFYISDQNKCISCG--RCVRVCNELQCTGAIDLAERGFDTHVATPFDVDLEKSKCVSCGN 194 Query: 46 CEPECPVDAIKPDTEPGLELW 66 C CPV A+ P ++ W Sbjct: 195 CVAVCPVGALMPKSKELFRQW 215 >gi|310658269|ref|YP_003935990.1| hypothetical protein CLOST_0962 [Clostridium sticklandii DSM 519] gi|308825047|emb|CBH21085.1| conserved protein of unknown function [Clostridium sticklandii] Length = 378 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 CI C H C CP + +N ++ +CI C C CP DA+ Sbjct: 322 CISCGH--CKRNCPANVISMVDNKPVVNLKDCISCFCCHEVCPADAV 366 >gi|301308715|ref|ZP_07214667.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] gi|300833239|gb|EFK63857.1| putative 4Fe-4S binding domain protein [Bacteroides sp. 20_3] Length = 258 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ CI C C +VCP + D C+ C C CPV AI+ T Sbjct: 193 TDTCISCG--ICAKVCPTGTISLSGDGKPEWADTCVQCVACIHRCPVRAIEYGT 244 Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 38 DECIDCGVCEPECPVDAIKP--DTEPGL 63 D CI CG+C CP I D +P Sbjct: 194 DTCISCGICAKVCPTGTISLSGDGKPEW 221 >gi|289449986|ref|YP_003475788.1| electron transport complex, RnfABCDGE type subunit B [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184533|gb|ADC90958.1| electron transport complex, RnfABCDGE type, B subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 283 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 CI C CV CP +N I +C C C +CP AI P P Sbjct: 227 ACIACG--ACVRSCPQKAIEIVDNHAVIDITKCTGCMTCVNKCPTSAILPQLIPAAAE 282 Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 16/42 (38%) Query: 15 TDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 DC CP D +N I D C C C CP IK Sbjct: 157 GDCAAACPFDAIRVIDNLAVIRSDMCKGCKKCVSVCPQKIIK 198 >gi|260174482|ref|ZP_05760894.1| ferredoxin [Bacteroides sp. D2] gi|315922749|ref|ZP_07918989.1| ferredoxin [Bacteroides sp. D2] gi|313696624|gb|EFS33459.1| ferredoxin [Bacteroides sp. D2] Length = 321 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAI 55 T +CI C CV+ CP + N I P +C C C CP + I Sbjct: 218 TVSCIGCG--KCVKTCPFEAITLENNLAYIDPHKCKSCRKCVEVCPQNTI 265 Score = 40.9 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 4/50 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAIK 56 C+ C CV C D + + +C CG C CP I+ Sbjct: 142 CLGCGD--CVAACQFDAIHMNPETGLPEVDEAKCTACGACVKACPKAIIE 189 >gi|255305705|ref|ZP_05349877.1| putative reductase [Clostridium difficile ATCC 43255] Length = 273 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C C V+ ++ + CI+CG C CP DAI+ E+ Sbjct: 7 EKCVGCG--MCESDCLVNAIKVKDDKAKVKNILCINCGHCMAICPTDAIEMQGFDKNEV- 63 Query: 67 LKINSEYATQWP 78 ++ N E P Sbjct: 64 IEYNRESFELEP 75 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + I+ ++C+ CG+CE +C V+AI Sbjct: 1 MIDINLEKCVGCGMCESDCLVNAI 24 >gi|255099820|ref|ZP_05328797.1| putative reductase [Clostridium difficile QCD-63q42] Length = 273 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C C V+ ++ + CI+CG C CP DAI+ E+ Sbjct: 7 EKCVGCG--MCESDCLVNAIKVKDDKAKVKNILCINCGHCMAICPTDAIEMQGFDKNEV- 63 Query: 67 LKINSEYATQWP 78 ++ N E P Sbjct: 64 IEYNRESFELEP 75 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + I+ ++C+ CG+CE +C V+AI Sbjct: 1 MIDINLEKCVGCGMCESDCLVNAI 24 >gi|215488185|ref|YP_002330616.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O127:H6 str. E2348/69] gi|312964856|ref|ZP_07779096.1| hydrogenase-4 component A [Escherichia coli 2362-75] gi|215266257|emb|CAS10686.1| predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit [Escherichia coli O127:H6 str. E2348/69] gi|312290412|gb|EFR18292.1| hydrogenase-4 component A [Escherichia coli 2362-75] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGL 63 C C++ CV CPV GE + + CI C C CP I + PG Sbjct: 55 CHQCENAPCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGD 109 >gi|153814817|ref|ZP_01967485.1| hypothetical protein RUMTOR_01032 [Ruminococcus torques ATCC 27756] gi|317500336|ref|ZP_07958561.1| RnfB/polyferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|331089655|ref|ZP_08338554.1| hypothetical protein HMPREF1025_02137 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847848|gb|EDK24766.1| hypothetical protein RUMTOR_01032 [Ruminococcus torques ATCC 27756] gi|316898277|gb|EFV20323.1| RnfB/polyferredoxin [Lachnospiraceae bacterium 8_1_57FAA] gi|330405023|gb|EGG84561.1| hypothetical protein HMPREF1025_02137 [Lachnospiraceae bacterium 3_1_46FAA] Length = 268 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Query: 13 KHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWLKINSE 72 + CV+ CP D + + + + C CG C CP I+ + +++ NS Sbjct: 146 GYGSCVDACPFDAIHIVDGIAVVDKEACKACGKCVDACPKHLIE-LIPYKQKTFVQCNSN 204 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECP 51 CI C C C I D+C +CGVC +CP Sbjct: 218 CIGC--RLCERNCEAGAITVNNFLAHIDADKCTNCGVCAEKCP 258 >gi|254974321|ref|ZP_05270793.1| putative reductase [Clostridium difficile QCD-66c26] gi|255091717|ref|ZP_05321195.1| putative reductase [Clostridium difficile CIP 107932] gi|255313445|ref|ZP_05355028.1| putative reductase [Clostridium difficile QCD-76w55] gi|255516133|ref|ZP_05383809.1| putative reductase [Clostridium difficile QCD-97b34] gi|255649229|ref|ZP_05396131.1| putative reductase [Clostridium difficile QCD-37x79] gi|260682403|ref|YP_003213688.1| putative reductase [Clostridium difficile CD196] gi|260686002|ref|YP_003217135.1| putative reductase [Clostridium difficile R20291] gi|306519331|ref|ZP_07405678.1| putative reductase [Clostridium difficile QCD-32g58] gi|260208566|emb|CBA61245.1| putative reductase [Clostridium difficile CD196] gi|260212018|emb|CBE02566.1| putative reductase [Clostridium difficile R20291] Length = 273 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELW 66 E C+ C C C V+ ++ + CI+CG C CP DAI+ E+ Sbjct: 7 EKCVGCG--MCESDCLVNAIKVKDDKAKVKNILCINCGHCMAICPTDAIEMQGFDKNEV- 63 Query: 67 LKINSEYATQWP 78 ++ N E P Sbjct: 64 IEYNRESFELEP 75 Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 32 FLAIHPDECIDCGVCEPECPVDAI 55 + I+ ++C+ CG+CE +C V+AI Sbjct: 1 MIDINLEKCVGCGMCESDCLVNAI 24 >gi|83590433|ref|YP_430442.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Moorella thermoacetica ATCC 39073] gi|83573347|gb|ABC19899.1| 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate [Moorella thermoacetica ATCC 39073] Length = 315 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 2/59 (3%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLEL 65 E C C C CP C E + C CG+C CP A+ E + Sbjct: 259 EACTEC--YTCWIYCPDSCITRTEEGPVFNMKYCKGCGLCTAVCPSGALTNVPELDFKD 315 >gi|20089354|ref|NP_615429.1| ferredoxin [Methanosarcina acetivorans C2A] gi|19914246|gb|AAM03909.1| ferredoxin [Methanosarcina acetivorans C2A] Length = 59 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFY--EGENFLAIHPDECIDCGVCEPECPVDAIKPD 58 V E C C CVE CPV+ E + DEC+DCG CE CPV AIK + Sbjct: 5 VNKEECTACG--TCVEECPVEAIVIDEDAGCAVVDEDECVDCGACEEACPVGAIKTE 59 >gi|57642013|ref|YP_184491.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] gi|57160337|dbj|BAD86267.1| 4Fe-4S cluster-binding protein [Thermococcus kodakarensis KOD1] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Query: 7 ENCILCKHTDCVEVCPVDC------FYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 E CI C CV VCP + EG ++++ +C C CE CP AIK Sbjct: 27 ELCIGCG--ACVNVCPAGALQAIDDYMEGIRKISLNIGKCTPCTRCEEVCPTGAIK 80 Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDTE 60 I P+ CI CG C CP A++ + Sbjct: 24 IDPELCIGCGACVNVCPAGALQAIDD 49 >gi|126173201|ref|YP_001049350.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Shewanella baltica OS155] gi|125996406|gb|ABN60481.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Shewanella baltica OS155] Length = 490 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +C+ C CVEVCP ECI+CG C C +K D +P L ++ Sbjct: 289 DCVDCNL--CVEVCPTGIDIRNGLQY-----ECINCGACVDACNETMLKFDYKPNLIGYM 341 Query: 68 KIN 70 N Sbjct: 342 SEN 344 >gi|319957489|ref|YP_004168752.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Nitratifractor salsuginis DSM 16511] gi|319419893|gb|ADV47003.1| molybdopterin oxidoreductase, iron-sulfur binding subunit [Nitratifractor salsuginis DSM 16511] Length = 187 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTE 60 C C + C EVCP Y EN + + ++CI C C CP DA D Sbjct: 64 CQHCDNAPCQEVCPTHATYYDENGVVRVDSNKCILCSYCMNACPYDARYVDDR 116 >gi|308051297|ref|YP_003914863.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] gi|307633487|gb|ADN77789.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Ferrimonas balearica DSM 9799] Length = 562 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Query: 11 LCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPD--TEPGLELWLK 68 C T C+ VCP D ++ + + P C G C CP A+ D T L+ ++K Sbjct: 197 GC--TRCLNVCPADAIESVDHKITVDPHLCHGAGSCTAACPTGALSYDQPTPAILKDYVK 254 Query: 69 --INS--EYATQWPNITTKKESLPSAA 91 + E + Q P + +S AA Sbjct: 255 RLLTRYLELSDQRPAVVLHDDSAGEAA 281 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDAI 55 V + C LC C +CP +G + L C+ CG+CE CP AI Sbjct: 425 VDVDKCTLC--MSCAALCPSRALMDGGDSPALKFTEQACVQCGLCERACPEKAI 476 >gi|238620942|ref|YP_002915768.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] gi|238382012|gb|ACR43100.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus M.16.4] Length = 280 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 95 YNIPINCFHCVNAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 147 >gi|256826664|ref|YP_003150623.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] gi|256582807|gb|ACU93941.1| Fe-S-cluster-containing hydrogenase subunit [Cryptobacterium curtum DSM 15641] Length = 179 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDTEPG 62 V C+ C+ C VCP + G + + + CI C C CP D E G Sbjct: 53 TVPLQCMHCEDAPCAAVCPTGAAHIGADGIVAVDEGRCIGCKYCMAACPYQVRVCDEETG 112 >gi|224367324|ref|YP_002601487.1| Fdx4 [Desulfobacterium autotrophicum HRM2] gi|223690040|gb|ACN13323.1| Fdx4 [Desulfobacterium autotrophicum HRM2] Length = 143 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFY-EGENFLAIHPDECIDCGVCEPECPVDAIKP 57 M++++ E CI C C ++CP E + I D CI C C CP +++ Sbjct: 1 MSFIINETCIGCG--ACTKICPSGAITGEKQELHTIDTDLCIQCRACGTVCPTGSVED 56 Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 12/63 (19%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHP---------DECIDCGVCEPECPVDAIKPDT 59 C+ C T CVE CP ++ + P CI CG CE ECPV AI Sbjct: 80 CMAC--TICVEACPTGAICL-DDPTSKDPHAYPALANEKRCIGCGFCEKECPVGAITMAA 136 Query: 60 EPG 62 Sbjct: 137 PVE 139 Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 13/30 (43%) Query: 32 FLAIHPDECIDCGVCEPECPVDAIKPDTEP 61 I + CI CG C CP AI + + Sbjct: 1 MSFIINETCIGCGACTKICPSGAITGEKQE 30 >gi|254475969|ref|ZP_05089355.1| NADH dehydrogenase i, i subunit [Ruegeria sp. R11] gi|214030212|gb|EEB71047.1| NADH dehydrogenase i, i subunit [Ruegeria sp. R11] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 119 Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI D EP + Sbjct: 63 ERCIACKLCEAVCPAQAITIDAEPRED 89 Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Query: 9 CILCKHTDCVEVCPVDCFYEGENF 32 CI C C E CPVD EG NF Sbjct: 104 CIYCGF--CQEACPVDAIVEGPNF 125 >gi|153870634|ref|ZP_01999994.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Beggiatoa sp. PS] gi|152072901|gb|EDN70007.1| heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta [Beggiatoa sp. PS] Length = 725 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 3/53 (5%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAIKPD 58 E C CK C CP E E + C CG C CPV I + Sbjct: 518 EGCTQCK--RCTVECPFGAINEDEKRYPLFNEARCRRCGTCMGACPVRVISFE 568 Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 11/24 (45%) Query: 37 PDECIDCGVCEPECPVDAIKPDTE 60 + C C C ECP AI D + Sbjct: 517 KEGCTQCKRCTVECPFGAINEDEK 540 >gi|150006892|ref|YP_001301635.1| hypothetical protein BDI_0228 [Parabacteroides distasonis ATCC 8503] gi|262384359|ref|ZP_06077494.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|149935316|gb|ABR42013.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|262294062|gb|EEY81995.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 258 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDT 59 T+ CI C C +VCP + D C+ C C CPV AI+ T Sbjct: 193 TDTCISCG--ICAKVCPTGTISLSGDGKPEWADTCVQCVACIHRCPVRAIEYGT 244 Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%) Query: 38 DECIDCGVCEPECPVDAIKP--DTEPGL 63 D CI CG+C CP I D +P Sbjct: 194 DTCISCGICAKVCPTGTISLSGDGKPEW 221 >gi|118474172|ref|YP_891448.1| ferredoxin [Campylobacter fetus subsp. fetus 82-40] gi|118413398|gb|ABK81818.1| ferredoxin [Campylobacter fetus subsp. fetus 82-40] Length = 83 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++T++CI C C E CP + YE + I PD C +C C CPVD Sbjct: 1 MSLMITKDCISCD--ACREECPDEAIYEDDPTYMIDPDRCSECISDYAEPACIVICPVDC 58 Query: 55 IKPDTE 60 I PD + Sbjct: 59 IVPDPD 64 >gi|88799940|ref|ZP_01115512.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Reinekea sp. MED297] gi|88777371|gb|EAR08574.1| predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Reinekea sp. MED297] Length = 196 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAI 55 + CI C T C++ CPVD + + EC C +C CPVD I Sbjct: 110 DECIGC--TKCIQACPVDAILGAAKQMHTVIESECTGCDLCVEPCPVDCI 157 Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 13/27 (48%) Query: 29 GENFLAIHPDECIDCGVCEPECPVDAI 55 I DECI C C CPVDAI Sbjct: 101 TPQVAIIREDECIGCTKCIQACPVDAI 127 >gi|308274764|emb|CBX31363.1| hypothetical protein N47_E48750 [uncultured Desulfobacterium sp.] Length = 1412 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%) Query: 4 VVTENCILCKHTDCVEVCPVDCF----YEGENFLAIH-PDECIDCGVCEPECPVDAI 55 V + CI C C E+CP +EG+ A + P C CG+C CP AI Sbjct: 1340 VDAQKCIGCGL--CAEICPFGGIIMEDFEGKGQRAKNVPASCKGCGLCAASCPQKAI 1394 Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 12/25 (48%) Query: 35 IHPDECIDCGVCEPECPVDAIKPDT 59 + +CI CG+C CP I + Sbjct: 1340 VDAQKCIGCGLCAEICPFGGIIMED 1364 >gi|304410442|ref|ZP_07392060.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS183] gi|307304534|ref|ZP_07584284.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica BA175] gi|304350926|gb|EFM15326.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica OS183] gi|306911936|gb|EFN42360.1| cytochrome c oxidase accessory protein CcoG [Shewanella baltica BA175] Length = 490 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 +C+ C CVEVCP ECI+CG C C +K D +P L ++ Sbjct: 289 DCVDCNL--CVEVCPTGIDIRNGLQY-----ECINCGACVDACNETMLKFDYKPNLIGYM 341 Query: 68 KIN 70 N Sbjct: 342 SEN 344 >gi|258593528|emb|CBE69869.1| Iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase [NC10 bacterium 'Dutch sediment'] Length = 163 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFL--AIHPDECIDCGVCEPECPVDAIK 56 + C C C ++CP ++++ + D+C+ C +C CP AI+ Sbjct: 49 IPTACTQCTEAWCAKICPTTAILRNDDYMAYYVVDDKCVGCKMCVLACPFGAIE 102 >gi|317153046|ref|YP_004121094.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio aespoeensis Aspo-2] gi|316943297|gb|ADU62348.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Desulfovibrio aespoeensis Aspo-2] Length = 701 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 3/50 (6%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 E C+ CV C G + + P C CG C CP I Sbjct: 136 EGCLGLG--TCVTACQFGAIEMGPDGYPVVDPALCTACGACAQVCPRGVI 183 >gi|257466645|ref|ZP_05630956.1| electron transport complex, RnfABCDGE type, B subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 312 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 8 NCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK 56 CI C C CP N I P +C +C +C CP AI Sbjct: 217 ACIGCG--MCQRTCPFGAIEVSNNLAKIDPAKCKNCQLCVVVCPTKAIY 263 Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 13 KHTDCVEVCPVDCFYEGENFL-AIHPDECIDCGVCEPECPVDAI 55 + DC VCPV E + ++ + CI CG+C CP I Sbjct: 145 GYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCVKACPKSVI 188 Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 18/69 (26%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE-------NFLAIHPD---------ECIDCGVCE 47 V E CI C CV+ CP ++ CI CG+C+ Sbjct: 168 VDEEACISCGL--CVKACPKSVIAMTPVAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQ 225 Query: 48 PECPVDAIK 56 CP AI+ Sbjct: 226 RTCPFGAIE 234 >gi|251771493|gb|EES52070.1| putative ferredoxin [Leptospirillum ferrodiazotrophum] Length = 84 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 1 MTYVVTENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDC------GVCEPECPVDA 54 M+ ++ +NCI C C+ CP D EG+ I PD C +C C CP+D Sbjct: 1 MSILIADNCISCG--ACLPECPNDAISEGDPIYVIDPDLCTECIGFHDEPQCAAVCPIDE 58 Query: 55 IKPDTEPGLELWLKINSEYATQWPN 79 +E ++ ++ A PN Sbjct: 59 CCIPDPNCVETEEQLLAKKARIHPN 83 >gi|222099246|ref|YP_002533814.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] gi|221571636|gb|ACM22448.1| Glutamate synthase (NADPH) GltB2 subunit [Thermotoga neapolitana DSM 4359] Length = 507 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 3 YVVTEN---CILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVDAI 55 +VV + CI C CV VC + E N + +C+ C CE CP +AI Sbjct: 10 FVVERDDYKCIRCL--ACVRVCSYGANYYDENANRVYTENYKCVGCHFCEAICPTEAI 65 >gi|189404540|ref|ZP_02790135.2| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189405452|ref|ZP_02815504.2| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC869] gi|217328744|ref|ZP_03444825.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. TW14588] gi|189365011|gb|EDU83427.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189370046|gb|EDU88462.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. EC869] gi|217318091|gb|EEC26518.1| iron-sulfur cluster-binding protein [Escherichia coli O157:H7 str. TW14588] gi|320188358|gb|EFW63020.1| NrfC-like protein [Escherichia coli O157:H7 str. EC1212] gi|326342037|gb|EGD65818.1| NrfC-like protein [Escherichia coli O157:H7 str. 1044] Length = 184 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVD 53 ++C C+ C++VCP + E + + +CI C C CP Sbjct: 52 QSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQ 99 >gi|229580939|ref|YP_002839338.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284999038|ref|YP_003420806.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] gi|228011655|gb|ACP47416.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446934|gb|ADB88436.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Sulfolobus islandicus L.D.8.5] Length = 280 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + C EVCPV F E+ + + +ECI C CP Sbjct: 95 YNIPINCFHCVNAPCTEVCPVGATFKRTEDGIVLVDYNECIGTKYCIYACPYG 147 >gi|152981481|ref|YP_001352407.1| electron transport complex protein RnfB [Janthinobacterium sp. Marseille] gi|151281558|gb|ABR89968.1| electron transport complex protein RnfB [Janthinobacterium sp. Marseille] Length = 233 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 8/78 (10%) Query: 4 VVTEN-CILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKPDT-- 59 V+ E+ CI C T C++ CPVD + I D C C +C CPVD I Sbjct: 86 VIDESLCIGC--TLCIQACPVDAIVGAAKQMHTIVNDLCTGCDLCVAPCPVDCIAMVEVT 143 Query: 60 --EPGLELWLKINSEYAT 75 + G + W + ++ A Sbjct: 144 PGKTGWDAWSQAQADDAR 161 >gi|153006362|ref|YP_001380687.1| hydrogenase 2 protein HybA [Anaeromyxobacter sp. Fw109-5] gi|152029935|gb|ABS27703.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Anaeromyxobacter sp. Fw109-5] Length = 293 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 2 TYVVTENCILCKHTDCVEVCPVDCFYEGENFLA-IHPDECIDCGVCEPECPVDAIKP 57 +V + C+ C CV VC + ++GE + C+ C C+ CP + + Sbjct: 100 AFVKAQ-CMHCADPACVSVCMLGALHKGERGVVAYDVSRCVGCRYCQVACPFNVPRF 155 >gi|189500784|ref|YP_001960254.1| sulfite reductase, dissimilatory-type beta subunit [Chlorobium phaeobacteroides BS1] gi|189496225|gb|ACE04773.1| sulfite reductase, dissimilatory-type beta subunit [Chlorobium phaeobacteroides BS1] Length = 359 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 12 CKHTDCVEVCPVDCFY----EGENFLAIHPDECIDCGVCEPECPVDAIKPDTEPGLELWL 67 C+ V CPV +G+ L I ++C+ CG C CP I +W+ Sbjct: 205 CELPKVVARCPVAAIRPTVVDGKKSLVIDEEKCMYCGACFGACPSMEINHPEYSRFAIWV 264 Query: 68 KINSEYATQWPNI 80 + A P + Sbjct: 265 AGKNSNARSKPTL 277 >gi|307720654|ref|YP_003891794.1| nitrate reductase (quinol-dependent), transmembrane subunit [Sulfurimonas autotrophica DSM 16294] gi|306978747|gb|ADN08782.1| nitrate reductase (quinol-dependent), transmembrane subunit [Sulfurimonas autotrophica DSM 16294] Length = 521 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 8 NCILCKHTDCVEVCPVDC-FYEGENFLAIHPD-ECIDCGVCEPECPVDAIKPDTE 60 +C C +C+ CP + E + +H D CI C C CP E Sbjct: 88 SCNHCIDPECLIGCPTESYIKIAETGIVVHDDDTCIGCQYCTWNCPYGVPVFHEE 142 >gi|302534962|ref|ZP_07287304.1| cytochrome c nitrite reductase, Fe-S protein [Streptomyces sp. C] gi|302443857|gb|EFL15673.1| cytochrome c nitrite reductase, Fe-S protein [Streptomyces sp. C] Length = 209 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 9 CILCKH--TDCVEVCPVDCFYEGENFLAIHPDE--CIDCGVCEPECPVDAIKPDTEPGLE 64 C+ C+ C EVCP D + + D CI C C CP K D + L+ Sbjct: 63 CMHCEDPVAPCAEVCPADAILVTADGVVQQADTTRCIGCANCVNACPFGVPKIDLQAKLQ 122 >gi|229523599|ref|ZP_04413004.1| iron-sulfur cluster-binding protein [Vibrio cholerae bv. albensis VL426] gi|229337180|gb|EEO02197.1| iron-sulfur cluster-binding protein [Vibrio cholerae bv. albensis VL426] Length = 570 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENF--LAIHPDECIDCGVCEPECPVDA 54 +C LC CV VCP + + L +C+ CG+C CP A Sbjct: 434 ASDCTLC--MSCVAVCPTRALHPAGDSPALRFIEQDCVQCGLCVKACPEQA 482 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 17 CVEVCPVDCFY-EGENF----LAIHPDECIDCGVCEPECPVDAIKP--DTEPGLELWLK 68 CV+ CP EG + + I+P C G C CP +AI + +++ Sbjct: 206 CVDACPAGALSSEGSDQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIE 264 Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 7/48 (14%) Query: 30 ENFLAIHPDEC-------IDCGVCEPECPVDAIKPDTEPGLELWLKIN 70 + + PD C C C CP A+ + ++IN Sbjct: 183 PKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEGSDQTGHRIQIN 230 >gi|257792125|ref|YP_003182731.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Eggerthella lenta DSM 2243] gi|317488744|ref|ZP_07947279.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325833021|ref|ZP_08165648.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] gi|257476022|gb|ACV56342.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Eggerthella lenta DSM 2243] gi|316912151|gb|EFV33725.1| 4Fe-4S binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325485738|gb|EGC88203.1| Hdr-like menaquinol oxidoreductase iron-sulfur, subunit 1 [Eggerthella sp. HGA1] Length = 208 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 5 VTENCILCKHTDCVEVCPVDCFYEGENFLAI--HPDECIDCGVCEPECPVD 53 + C C++ CV+VCPV Y+ A+ D+CI C +C CP Sbjct: 62 IAVACQHCENPACVKVCPVGATYKDPETGAVRQDYDKCIGCRMCMSACPYT 112 >gi|226329954|ref|ZP_03805472.1| hypothetical protein PROPEN_03867 [Proteus penneri ATCC 35198] gi|225200749|gb|EEG83103.1| hypothetical protein PROPEN_03867 [Proteus penneri ATCC 35198] Length = 294 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%) Query: 4 VVTENCILCKHT-----DCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIK-- 56 ++ + C+ + C +VCPV + I + C CG C CPVDAI+ Sbjct: 14 IINDKCVRKRLKQSLCDSCSKVCPVGAITFAHLDVKIDNERCFQCGNCLFTCPVDAIENI 73 Query: 57 -PDTEPGLELWLKIN 70 P + +L +N Sbjct: 74 APHERTYQDNYLVVN 88 Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%) Query: 6 TENCILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPEC 50 TE CILC + C +VC N + C C CE C Sbjct: 196 TETCILC--SACAKVCDEGAIELENNIFTLDEKRCTGCMSCEVVC 238 >gi|212636841|ref|YP_002313366.1| iron-sulfur binding 4Fe-4S ferredoxin [Shewanella piezotolerans WP3] gi|212558325|gb|ACJ30779.1| 4Fe-4S ferredoxin, iron-sulfur binding [Shewanella piezotolerans WP3] Length = 227 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 8 NCILCKHTDCVEVCPVDC--FYEGENFLAIHPDECIDCGVCEPECPVD 53 +C C+ CV+VCP + +A++ D C+ C C CP Sbjct: 95 SCQHCEAAPCVKVCPTGAAYIDKETGIVAVNEDRCVGCQYCIAACPYQ 142 >gi|171186440|ref|YP_001795359.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935652|gb|ACB40913.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Thermoproteus neutrophilus V24Sta] Length = 96 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFLAIHPDECIDCGVCEPECPVDAIKPDTE 60 C C+ C +CP C+ + + + + + C++CG C CP D I D Sbjct: 34 CKRCEKKPCTYMCPAKCYVQQGDGVVLSTEACVECGTCRVVCPYDNIDWDYP 85 >gi|15922151|ref|NP_377820.1| thiosulfate reductase electron transport protein PhsB [Sulfolobus tokodaii str. 7] gi|15622939|dbj|BAB66929.1| 270aa long hypothetical thiosulfate reductase electron transport protein phsB [Sulfolobus tokodaii str. 7] Length = 270 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 YVVTENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPVD 53 Y + NC C + CV VCPV F E+ + + +ECI C CP Sbjct: 87 YNIPINCFHCMNAPCVPVCPVGATFKREEDGIVLVDYNECIGTKYCIYACPYG 139 >gi|114330933|ref|YP_747155.1| NADH dehydrogenase subunit I [Nitrosomonas eutropha C91] gi|122314151|sp|Q0AHJ2|NUOI_NITEC RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|114307947|gb|ABI59190.1| NADH dehydrogenase subunit I [Nitrosomonas eutropha C91] Length = 162 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 7 ENCILCKHTDCVEVCPVDCFY-------EGENFLA---IHPDECIDCGVCEPECPVDAI 55 E CI CK C VCP +G I +CI CG CE CPVDAI Sbjct: 61 ERCIACKL--CEAVCPALAITIESEQRDDGTRRTTRYDIDLIKCIFCGFCEEACPVDAI 117 Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 38 DECIDCGVCEPECPVDAIKPDTEPGLE 64 + CI C +CE CP AI ++E + Sbjct: 61 ERCIACKLCEAVCPALAITIESEQRDD 87 >gi|99080595|ref|YP_612749.1| NADH dehydrogenase subunit I [Ruegeria sp. TM1040] gi|115502544|sp|Q1GIM9|NUOI_SILST RecName: Full=NADH-quinone oxidoreductase subunit I; AltName: Full=NADH dehydrogenase I subunit I; AltName: Full=NDH-1 subunit I gi|99036875|gb|ABF63487.1| NADH-quinone oxidoreductase chain I [Ruegeria sp. TM1040] Length = 164 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 7 ENCILCKHTDCVEVCPVDCFYEGEN----------FLAIHPDECIDCGVCEPECPVDAI- 55 E CI CK C VCP I +CI CG C+ CPVDAI Sbjct: 63 ERCIACKL--CEAVCPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 120 Query: 56 -----KPDTEPGLELWLKINSEYA 74 + TE EL+ + A Sbjct: 121 EGPNFEFATETREELFYDKDKLLA 144 >gi|315633731|ref|ZP_07889021.1| thiosulfate reductase electron transporter phsb [Aggregatibacter segnis ATCC 33393] gi|325577752|ref|ZP_08148027.1| thiosulfate reductase electron transporter phsb [Haemophilus parainfluenzae ATCC 33392] gi|315477773|gb|EFU68515.1| thiosulfate reductase electron transporter phsb [Aggregatibacter segnis ATCC 33393] gi|325160497|gb|EGC72623.1| thiosulfate reductase electron transporter phsb [Haemophilus parainfluenzae ATCC 33392] Length = 225 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 ENCILCKHTDCVEVCPVDC-FYEGENFLA-IHPDECIDCGVCEPECPV 52 ++C C + CV VCP F + E + +H D C+ C C CP Sbjct: 92 QSCQHCTNAPCVAVCPTGASFIDPETGIVDVHKDLCVGCQYCVAVCPY 139 >gi|300087835|ref|YP_003758357.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527568|gb|ADJ26036.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 1008 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Query: 4 VVTENCILCKHTDCVEVCPVDCFYEGE--------NFLAIHPDECIDCGVCEPECPVDAI 55 V+ ENC C + CV+ CP D E + P +C CGVC CP I Sbjct: 930 VLDENCDGCAY--CVDPCPYDAISLLEYNFKGGLKKTVEADPAKCHGCGVCMATCPKKGI 987 Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 27/86 (31%), Gaps = 29/86 (33%) Query: 9 CILCKHTDCVEVCPVDCFYEGENFL------------------AIHPDECI------DCG 44 C C C+E CP E + L I D CI C Sbjct: 109 CTGCNV--CIEKCPAKTESEFDRGLAKRKAIYTLYSQAVPN