HHsearch results for GI: 254780418 and protein with PDBid: 2zjr_S
>2zjr_S 50S ribosomal protein L25; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.53.1.1 PDB: 1njm_T* 1nwx_T* 1njp_T* 1xbp_T* 2zjp_S* 2zjq_S 1nwy_T 3cf5_S* 3dll_S* 1nkw_T 1sm1_T* 1yl3_V 2b66_Z 2b9n_Z 2b9p_Z 1pnu_T 1pny_T 1vor_W 1vou_W 1vow_W ...
Probab=100.00 E-value=0 Score=357.11 Aligned_cols=175 Identities=27% Similarity=0.462 Sum_probs=164.4
Q ss_pred EEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEECHHHEEHHCCCCCEEEEEECCCC-CCEEEEEEEEECC
Q ss_conf 999999916876177899997899438996789885569998002210011146622579961677-5203786121214
Q gi|254780418|r 6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLD 84 (191)
Q Consensus 6 ~~L~~~~R~~~gk~~~r~lR~~G~VPaviYG~~~e~~~i~v~~~~l~k~l~~~~~~~~v~~l~i~g-~~~~vlikevQ~~ 84 (191)
++|+|++|+ +|++|++|+||||+||++ +|++++++.++|.++++. .+.+++|+|+++| ++++||+|+||||
T Consensus 1 i~l~a~~R~------~k~~R~~G~VPaViYG~~-e~~~i~v~~~~l~k~l~~-~g~~~ii~L~idG~~~~~vlikevQ~~ 72 (237)
T 2zjr_S 1 MELTAKPRT------PKQKLDESMIAAVAYNKE-NNVSFALDRKAFDRAFRQ-QSTTGLFDITVEGGETFPALVKAVQMD 72 (237)
T ss_dssp CCCCBCCSC------CHHHHSSSCCCEEEESSS-CCCCCBCCHHHHHHHHHH-HTTSCCCBCCCTTCCCCBCCEEEEEEC
T ss_pred CEEEEEECH------HHHHHHCCCCCEEEECCC-CCEEEEECHHHHHHHHHH-CCCCEEEEEEECCCCEEEEEEEEEEEC
T ss_conf 968874342------678863898878994799-888899859999999873-576468999976990689999999851
Q ss_pred CCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEE-HHHCCCEEEECCCCCCCCCEEEEE
Q ss_conf 3268465448999328976999963699605654432123113576545788880-767963468322223569779999
Q gi|254780418|r 85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHME 163 (191)
Q Consensus 85 p~~~~i~HvDF~~v~~~~~v~v~VPI~~~ge~~~~Gvk~GG~l~~~~~~i~v~~~-p~~IPe~ievDvs~L~~Gd~i~v~ 163 (191)
|+++.++|+|||+++++++|+++|||+|+|+ |+|+++||+|++.+++|+|+|+ |.+||++|+||||+|++||+|+++
T Consensus 73 pv~~~i~HvDF~~V~~~~kv~v~VPi~~~Ge--~~gvk~GG~l~~~~~~v~v~~~~P~~IPe~IeVDvs~L~iGd~i~v~ 150 (237)
T 2zjr_S 73 KRKRAPIHVDFYMVTYGEPVEVSVPVHTTGR--SQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAG 150 (237)
T ss_dssp SSSCCEEEEEEECCCSSCCCEEEEECEEESC--CTTTTTTSEEECSCSEEEEECCCTTCCCSCCEEECTTCCSSCEEETT
T ss_pred CCCCCEEEEEEEEECCCCEEEEEEEEEEECC--CCCCCCCCEEEEEEEEEEEECCCHHHCCHHEEECCCCCCCCCEEEEE
T ss_conf 4579547889999248945999843899514--43323575268876421023468345826228142237589879998
Q ss_pred EEECCCCCEECCCCCCEEEEEECCCCC
Q ss_conf 753588867836898269999448877
Q gi|254780418|r 164 DIRLPEKTSSMSQLNITIATIVAPISG 190 (191)
Q Consensus 164 Dl~lpegv~~l~d~~~~vvsv~~P~~g 190 (191)
||+||+|+++++|++.+||+|.+||+.
T Consensus 151 Dl~lp~gv~l~~d~d~~V~~V~~pr~~ 177 (237)
T 2zjr_S 151 DIKLPEGCTLAADPELTVVSVLPPRLT 177 (237)
T ss_dssp TSCCSTTCCCCSCTTCEEEEEECCC--
T ss_pred EECCCCCEEECCCCCCEEEEEECCCCC
T ss_conf 442799808825999579999688743