HHsearch results for GI: 254780418 and protein with PDBid: 2zjr_S

>2zjr_S 50S ribosomal protein L25; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.53.1.1 PDB: 1njm_T* 1nwx_T* 1njp_T* 1xbp_T* 2zjp_S* 2zjq_S 1nwy_T 3cf5_S* 3dll_S* 1nkw_T 1sm1_T* 1yl3_V 2b66_Z 2b9n_Z 2b9p_Z 1pnu_T 1pny_T 1vor_W 1vou_W 1vow_W ...
Probab=100.00  E-value=0  Score=357.11  Aligned_cols=175  Identities=27%  Similarity=0.462  Sum_probs=164.4

Q ss_pred             EEEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEECHHHEEHHCCCCCEEEEEECCCC-CCEEEEEEEEECC
Q ss_conf             999999916876177899997899438996789885569998002210011146622579961677-5203786121214
Q gi|254780418|r    6 CKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILTLDIGK-ELVHVIPKDYQLD   84 (191)
Q Consensus         6 ~~L~~~~R~~~gk~~~r~lR~~G~VPaviYG~~~e~~~i~v~~~~l~k~l~~~~~~~~v~~l~i~g-~~~~vlikevQ~~   84 (191)
                      ++|+|++|+      +|++|++|+||||+||++ +|++++++.++|.++++. .+.+++|+|+++| ++++||+|+||||
T Consensus         1 i~l~a~~R~------~k~~R~~G~VPaViYG~~-e~~~i~v~~~~l~k~l~~-~g~~~ii~L~idG~~~~~vlikevQ~~   72 (237)
T 2zjr_S            1 MELTAKPRT------PKQKLDESMIAAVAYNKE-NNVSFALDRKAFDRAFRQ-QSTTGLFDITVEGGETFPALVKAVQMD   72 (237)
T ss_dssp             CCCCBCCSC------CHHHHSSSCCCEEEESSS-CCCCCBCCHHHHHHHHHH-HTTSCCCBCCCTTCCCCBCCEEEEEEC
T ss_pred             CEEEEEECH------HHHHHHCCCCCEEEECCC-CCEEEEECHHHHHHHHHH-CCCCEEEEEEECCCCEEEEEEEEEEEC
T ss_conf             968874342------678863898878994799-888899859999999873-576468999976990689999999851


Q ss_pred             CCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEE-HHHCCCEEEECCCCCCCCCEEEEE
Q ss_conf             3268465448999328976999963699605654432123113576545788880-767963468322223569779999
Q gi|254780418|r   85 PVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHME  163 (191)
Q Consensus        85 p~~~~i~HvDF~~v~~~~~v~v~VPI~~~ge~~~~Gvk~GG~l~~~~~~i~v~~~-p~~IPe~ievDvs~L~~Gd~i~v~  163 (191)
                      |+++.++|+|||+++++++|+++|||+|+|+  |+|+++||+|++.+++|+|+|+ |.+||++|+||||+|++||+|+++
T Consensus        73 pv~~~i~HvDF~~V~~~~kv~v~VPi~~~Ge--~~gvk~GG~l~~~~~~v~v~~~~P~~IPe~IeVDvs~L~iGd~i~v~  150 (237)
T 2zjr_S           73 KRKRAPIHVDFYMVTYGEPVEVSVPVHTTGR--SQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAG  150 (237)
T ss_dssp             SSSCCEEEEEEECCCSSCCCEEEEECEEESC--CTTTTTTSEEECSCSEEEEECCCTTCCCSCCEEECTTCCSSCEEETT
T ss_pred             CCCCCEEEEEEEEECCCCEEEEEEEEEEECC--CCCCCCCCEEEEEEEEEEEECCCHHHCCHHEEECCCCCCCCCEEEEE
T ss_conf             4579547889999248945999843899514--43323575268876421023468345826228142237589879998


Q ss_pred             EEECCCCCEECCCCCCEEEEEECCCCC
Q ss_conf             753588867836898269999448877
Q gi|254780418|r  164 DIRLPEKTSSMSQLNITIATIVAPISG  190 (191)
Q Consensus       164 Dl~lpegv~~l~d~~~~vvsv~~P~~g  190 (191)
                      ||+||+|+++++|++.+||+|.+||+.
T Consensus       151 Dl~lp~gv~l~~d~d~~V~~V~~pr~~  177 (237)
T 2zjr_S          151 DIKLPEGCTLAADPELTVVSVLPPRLT  177 (237)
T ss_dssp             TSCCSTTCCCCSCTTCEEEEEECCC--
T ss_pred             EECCCCCEEECCCCCCEEEEEECCCCC
T ss_conf             442799808825999579999688743