PSIBLAST alignment of GI: 254780418 and protein with PDB id: 1nkw

gi|28948939|pdb|1NKW|T Chain T, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Length = 253
>gi|51247392|pdb|1SM1|T Chain T, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin Length = 253
 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 2   DQKECKLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFM 61
           D    +L+A  R    K           I A+ Y N  +    AL  K   +    ++  
Sbjct: 13  DTATMELTAKPRTPKQKLD------ESMIAAVAY-NKENNVSFALDRKAFDRAFRQQSTT 65

Query: 62  TTILTLDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGI 121
                   G E    + K  Q+D      IH DF  V+ G  V V VPV      +S G 
Sbjct: 66  GLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTT--GRSQGE 123

Query: 122 KQGGKLNVVCHEVSLLCP-ANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSMSQLNIT 180
            QGG +++V H + ++ P    IP  + VD+  + IGD I   DI+LPE  +  +   +T
Sbjct: 124 VQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELT 183

Query: 181 IATIVAPI 188
           + +++ P 
Sbjct: 184 VVSVLPPR 191